BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023133
(287 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255585157|ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526886|gb|EEF29094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 405
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/288 (64%), Positives = 235/288 (81%), Gaps = 1/288 (0%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDL 59
+C GY+ KLC +G++ AVRLLQSL+++NI L PNAYN V+ A+ E N D+ ++ KDL
Sbjct: 118 ICTGYLHKLCNSGSLFVAVRLLQSLQNRNITLGPNAYNLVMEAAGEANKADIVSRVFKDL 177
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++S ++L S + N AR FI T+D L+ F++EV+++A P S++V+NRIIFAFA+ RQ
Sbjct: 178 MMSCKSLPSSSFINLARGFINTNDHVLLMKFVKEVLELAFPRSMVVINRIIFAFAECRQF 237
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KALLIFD IK L+ KPDLITYN+VL ILGR GRV++ML EF+SMKEAG+VPDFI YNTL
Sbjct: 238 DKALLIFDQIKDLEYKPDLITYNMVLHILGRAGRVDEMLYEFSSMKEAGIVPDFICYNTL 297
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
LN L+K RLDLCL+Y REMGESGI+ DLLTYTALI SFG++G+IEESLRLF+DMK +QI
Sbjct: 298 LNQLQKAGRLDLCLVYIREMGESGIEADLLTYTALIQSFGKSGHIEESLRLFDDMKTRQI 357
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
RPSIY+YRSLI+ KKMGKV+LAMT+ EEMN+S +LAGP DFKRK R
Sbjct: 358 RPSIYIYRSLINTAKKMGKVELAMTLLEEMNASPPNLAGPNDFKRKRR 405
>gi|224059682|ref|XP_002299968.1| predicted protein [Populus trichocarpa]
gi|222847226|gb|EEE84773.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/282 (65%), Positives = 231/282 (81%), Gaps = 1/282 (0%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVS 62
Y+ LCKAGN+ AVRLLQSL DKNIFL P+AYN +LVA++E NDI + Q+ KDL+VS
Sbjct: 68 AYVHNLCKAGNLFTAVRLLQSLCDKNIFLGPSAYNIILVAASEKNDIAILSQVFKDLIVS 127
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
++L S Y AR F+ T+D QLL ++EV ++ P S++VVNRIIFAFA+ Q +KA
Sbjct: 128 CQSLPSTSYLKLARGFVKTNDDVQLLRLVKEVSEMTFPSSMMVVNRIIFAFAECGQFDKA 187
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
LLIF ++ LKCKPDL+TYN VLD+LG GR+++ML EFASMKEAG++PDFISYNTLLN
Sbjct: 188 LLIFKQMENLKCKPDLVTYNTVLDLLGHAGRIDEMLCEFASMKEAGILPDFISYNTLLNQ 247
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K+ RLDLC +Y R+M ESGI+PDLLTYTALI SFG++GNIEESLRLFN+MK +QIRPS
Sbjct: 248 LWKVGRLDLCSVYSRDMVESGIEPDLLTYTALIGSFGQSGNIEESLRLFNEMKTKQIRPS 307
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKR 284
IY+YRSLI +LKKMGKV+LAMT+ EEMN+S+S+LAG KDFKR
Sbjct: 308 IYIYRSLIASLKKMGKVELAMTLLEEMNASMSNLAGHKDFKR 349
>gi|224103987|ref|XP_002313272.1| predicted protein [Populus trichocarpa]
gi|222849680|gb|EEE87227.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/285 (63%), Positives = 231/285 (81%), Gaps = 1/285 (0%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVS 62
Y+ LCKAG + AAVRLL+ LRDKNIFL P+AYN +LV ++E ND+++ Q+ KDL++S
Sbjct: 98 AYVHNLCKAGTLFAAVRLLRLLRDKNIFLGPSAYNIILVTASEKNDVEILSQVFKDLILS 157
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
++L S Y AR F+ ++D QLL ++EV ++ P S VVNR IFAFA+ Q +KA
Sbjct: 158 FQSLPSSLYLKLARGFVKSNDDVQLLRLVKEVSELTFPSSTKVVNRFIFAFAECGQFDKA 217
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+LIF+ ++ LKCKPDL+TYN VLD+LGR GR+++ML EFASMKEAG++PDFISYNTLLN
Sbjct: 218 ILIFEQMENLKCKPDLVTYNTVLDLLGRAGRIDEMLGEFASMKEAGILPDFISYNTLLNQ 277
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K+ RLDLC +YFR+M +GI+PDLLTYTALI SFG++GNIEESLRLFN+MK +QIRPS
Sbjct: 278 LTKVGRLDLCSVYFRDMVGNGIEPDLLTYTALIWSFGQSGNIEESLRLFNEMKTKQIRPS 337
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
IY+YRSLI +LKKMGK++LAMT EEMN+S+S+LAGPKDFKR R
Sbjct: 338 IYIYRSLIASLKKMGKIELAMTFLEEMNASMSNLAGPKDFKRTHR 382
>gi|302143548|emb|CBI22109.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/288 (63%), Positives = 230/288 (79%), Gaps = 2/288 (0%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDL 59
+C YI+KL KAGN SAA R +QSL DK+IFL PNAYN +LVA++E N ID QI KDL
Sbjct: 100 LCTTYIDKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDL 159
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
LVS++ LSS Y N A+ F TDD LL F+ EV ++ P + ++NRII AFA+ RQI
Sbjct: 160 LVSNKPLSSTSYFNVAKVFTKTDDSV-LLKFVREVSELTFPRNATILNRIIHAFAECRQI 218
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EK+L+IFDH+K LKCKPDLITYN VL LGR GR+++ML+EF+SMK A + PD ISYNTL
Sbjct: 219 EKSLIIFDHMKSLKCKPDLITYNTVLGFLGRAGRLDEMLHEFSSMKVANIAPDIISYNTL 278
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
LN+L+K+ RLDLCL++FREMGE+G+KPDL TY ALI+ FG++GN+EE+LRLF++MKQ QI
Sbjct: 279 LNSLQKVGRLDLCLVFFREMGENGLKPDLRTYRALIEGFGQSGNLEEALRLFSEMKQGQI 338
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
PSIY+YRSLI+ KKMGKV+LAM++ EEMN+ L DL GPKDFK+K R
Sbjct: 339 CPSIYIYRSLINYSKKMGKVELAMSLSEEMNACLPDLIGPKDFKQKNR 386
>gi|225446837|ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Vitis vinifera]
Length = 357
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/288 (63%), Positives = 230/288 (79%), Gaps = 2/288 (0%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDL 59
+C YI+KL KAGN SAA R +QSL DK+IFL PNAYN +LVA++E N ID QI KDL
Sbjct: 71 LCTTYIDKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDL 130
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
LVS++ LSS Y N A+ F TDD LL F+ EV ++ P + ++NRII AFA+ RQI
Sbjct: 131 LVSNKPLSSTSYFNVAKVFTKTDDSV-LLKFVREVSELTFPRNATILNRIIHAFAECRQI 189
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EK+L+IFDH+K LKCKPDLITYN VL LGR GR+++ML+EF+SMK A + PD ISYNTL
Sbjct: 190 EKSLIIFDHMKSLKCKPDLITYNTVLGFLGRAGRLDEMLHEFSSMKVANIAPDIISYNTL 249
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
LN+L+K+ RLDLCL++FREMGE+G+KPDL TY ALI+ FG++GN+EE+LRLF++MKQ QI
Sbjct: 250 LNSLQKVGRLDLCLVFFREMGENGLKPDLRTYRALIEGFGQSGNLEEALRLFSEMKQGQI 309
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
PSIY+YRSLI+ KKMGKV+LAM++ EEMN+ L DL GPKDFK+K R
Sbjct: 310 CPSIYIYRSLINYSKKMGKVELAMSLSEEMNACLPDLIGPKDFKQKNR 357
>gi|356549954|ref|XP_003543355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Glycine max]
Length = 366
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/285 (54%), Positives = 213/285 (74%), Gaps = 1/285 (0%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVS 62
GYI+K+CKAGN+S A ++L+ L DKNI + + YN +LV +++ NDIDLS Q+ + LL+S
Sbjct: 75 GYIDKICKAGNLSVASKMLEILNDKNIVVTLDVYNLILVEASQKNDIDLSCQVFRKLLLS 134
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ S+ FA+AF +DC +LL F+EE+ +I + +N+IIFAFAK Q +K+
Sbjct: 135 CESPSATSCLKFAQAFSKVNDCVELLRFLEEISEITCSSTSSFINKIIFAFAKCGQRDKS 194
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L+IFDH+K DL+TYNIVLDILGR GRV++ML+ FAS+K+ G VPD +SYNTL+N
Sbjct: 195 LVIFDHLKRQGYGLDLVTYNIVLDILGRTGRVDEMLDVFASIKDTGFVPDTVSYNTLING 254
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
LRK R D+C +YF+EM E G++PDLLTYTA+I+ FGR+GN+EESL+ F +MK + + PS
Sbjct: 255 LRKAGRFDMCFVYFKEMTEKGVEPDLLTYTAIIEIFGRSGNVEESLKCFREMKLKGVLPS 314
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
IY+YRSLI NL K GKV+LA + EE+NSS + LAGP DFK+K +
Sbjct: 315 IYIYRSLIHNLNKTGKVELATELLEELNSSSTCLAGPADFKQKRK 359
>gi|42561931|ref|NP_172654.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75104249|sp|Q5BIV3.1|PPR35_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11900
gi|60543317|gb|AAX22256.1| At1g11900 [Arabidopsis thaliana]
gi|332190689|gb|AEE28810.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 367
Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 212/287 (73%), Gaps = 5/287 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV--S 62
+EK + GN+S A LLQSL++KNI LP + + +L A+ E ND+ LS ++ +++L+
Sbjct: 77 VEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVLILPG 136
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
LSSDCY N ARAFI TDDCT L ++E+ + + P +IV+NRIIFAFA++RQI+K
Sbjct: 137 KEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKV 196
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLN 181
L+I +K +CKPD+ITYN VLDILGR G VN++L ++MKE V + I+YNT+LN
Sbjct: 197 LMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLN 256
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+RK R D+CL+ + EM + GI+PDLL+YTA+IDS GR+GN++ESLRLF++MKQ+QIRP
Sbjct: 257 GMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRP 316
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM-NSSLSDLAGPKDFKRKAR 287
S+YVYR+LID LKK G A+ + +E+ N+S DLAGP+DFKR R
Sbjct: 317 SVYVYRALIDCLKKSGDFQSALQLSDELKNTSSLDLAGPQDFKRHLR 363
>gi|3157946|gb|AAC17629.1| Similar to salt-inducible membrane protein gb|U08285 from Nicotiana
tabacum. EST gb|F14010 comes from this gene [Arabidopsis
thaliana]
Length = 364
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 212/287 (73%), Gaps = 5/287 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV--S 62
+EK + GN+S A LLQSL++KNI LP + + +L A+ E ND+ LS ++ +++L+
Sbjct: 74 VEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVLILPG 133
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
LSSDCY N ARAFI TDDCT L ++E+ + + P +IV+NRIIFAFA++RQI+K
Sbjct: 134 KEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKV 193
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLN 181
L+I +K +CKPD+ITYN VLDILGR G VN++L ++MKE V + I+YNT+LN
Sbjct: 194 LMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLN 253
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+RK R D+CL+ + EM + GI+PDLL+YTA+IDS GR+GN++ESLRLF++MKQ+QIRP
Sbjct: 254 GMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRP 313
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM-NSSLSDLAGPKDFKRKAR 287
S+YVYR+LID LKK G A+ + +E+ N+S DLAGP+DFKR R
Sbjct: 314 SVYVYRALIDCLKKSGDFQSALQLSDELKNTSSLDLAGPQDFKRHLR 360
>gi|297849558|ref|XP_002892660.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338502|gb|EFH68919.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 367
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/287 (54%), Positives = 209/287 (72%), Gaps = 5/287 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVS-- 62
+EK + GN+SAA L QSL+DKNI LP + + +L + E ND+ LS +I ++LL+S
Sbjct: 77 VEKYTRDGNLSAANELWQSLQDKNICLPISVFKNLLAGAGEKNDMKLSCRIFRELLISPV 136
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
LSSDCY N ARAFI T+DCT L ++E+ + + P +IV+NRII AFA++RQI+K
Sbjct: 137 KEPLSSDCYLNLARAFINTNDCTHLTSLVKEISESSLPYRLIVMNRIILAFAETRQIDKV 196
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLN 181
L+I +K +CKPD+ITYN VLDILGR G VN+ML ++MKE V + I+YNT+LN
Sbjct: 197 LMILKQMKEWECKPDVITYNSVLDILGRAGLVNEMLGVLSTMKEDCDVSVNIITYNTVLN 256
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+RK R D+CL+ + EM GI+PDLL+YTA+IDS GR+GN +ESLRLF++MKQ+QIRP
Sbjct: 257 GMRKACRFDMCLVIYNEMVLRGIEPDLLSYTAVIDSLGRSGNTKESLRLFDEMKQRQIRP 316
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM-NSSLSDLAGPKDFKRKAR 287
S+YVYR+LID LKK G A+ + +E+ N+S DLAGP+DFKR R
Sbjct: 317 SVYVYRALIDCLKKSGDFQGALQLSDELKNTSSLDLAGPQDFKRHLR 363
>gi|357445513|ref|XP_003593034.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482082|gb|AES63285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 361
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 161/288 (55%), Positives = 207/288 (71%), Gaps = 3/288 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
+ YI+K+CKAGN+SA ++LQ L DKNI + PN YN +LV +++ NDI LS Q+LK LL+
Sbjct: 70 SAYIDKMCKAGNLSALSQMLQILNDKNIVVSPNMYNLILVEASQKNDIVLSCQMLKKLLL 129
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV-VNRIIFAFAKSRQIE 120
S + S+ FA+AF + T+L+IF++E+V S SI +N+IIFAFAKS Q +
Sbjct: 130 SGESPSATSCVKFAQAFREVNQFTELIIFLKEIVSETSCSSISSFINKIIFAFAKSGQKD 189
Query: 121 KALLIFDHIKGLKCKP-DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
AL IF+H++ DLITYNIVLDILGR GRV++ML+ FAS+KE G VPD ISYNTL
Sbjct: 190 SALAIFEHLREQNNSCLDLITYNIVLDILGRKGRVDEMLDMFASLKETGFVPDTISYNTL 249
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N LRK+ R D+C YF+EM E+G +PDLLTYTALID GR GNIEESL+ F +MK + I
Sbjct: 250 INGLRKVGRSDMCFEYFKEMKENGNEPDLLTYTALIDISGRAGNIEESLKFFMEMKLKGI 309
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
PSI +YRSLI NL K ++LA + EEMNSS + LA P DFK K R
Sbjct: 310 LPSIQIYRSLIHNLNKTENIELATELLEEMNSSSTCLAVPGDFKTKRR 357
>gi|124360267|gb|ABN08280.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 349
Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 161/288 (55%), Positives = 207/288 (71%), Gaps = 3/288 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
+ YI+K+CKAGN+SA ++LQ L DKNI + PN YN +LV +++ NDI LS Q+LK LL+
Sbjct: 58 SAYIDKMCKAGNLSALSQMLQILNDKNIVVSPNMYNLILVEASQKNDIVLSCQMLKKLLL 117
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV-VNRIIFAFAKSRQIE 120
S + S+ FA+AF + T+L+IF++E+V S SI +N+IIFAFAKS Q +
Sbjct: 118 SGESPSATSCVKFAQAFREVNQFTELIIFLKEIVSETSCSSISSFINKIIFAFAKSGQKD 177
Query: 121 KALLIFDHIKGLKCKP-DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
AL IF+H++ DLITYNIVLDILGR GRV++ML+ FAS+KE G VPD ISYNTL
Sbjct: 178 SALAIFEHLREQNNSCLDLITYNIVLDILGRKGRVDEMLDMFASLKETGFVPDTISYNTL 237
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N LRK+ R D+C YF+EM E+G +PDLLTYTALID GR GNIEESL+ F +MK + I
Sbjct: 238 INGLRKVGRSDMCFEYFKEMKENGNEPDLLTYTALIDISGRAGNIEESLKFFMEMKLKGI 297
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
PSI +YRSLI NL K ++LA + EEMNSS + LA P DFK K R
Sbjct: 298 LPSIQIYRSLIHNLNKTENIELATELLEEMNSSSTCLAVPGDFKTKRR 345
>gi|356542129|ref|XP_003539523.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11900-like [Glycine max]
Length = 369
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/285 (52%), Positives = 206/285 (72%), Gaps = 1/285 (0%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVS 62
YI K+CK GN+S A ++LQ L DK+I + N YN +LV +++ NDIDLS Q+ LL+S
Sbjct: 75 AYINKMCKPGNLSVASKMLQILNDKSIAVTLNVYNFILVEASQKNDIDLSCQVFXKLLLS 134
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
++ S+ FA+AF +DC +LL F+E + I +N+IIFAFAK Q +K+
Sbjct: 135 CKSPSATSCLKFAQAFXKMNDCVKLLQFLEVISVITCSSISSFINKIIFAFAKFGQRDKS 194
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L+IFDH+K DL+TYNIVLDILG G +++ML+ FAS+K +PD +SYNTL+N
Sbjct: 195 LVIFDHLKRQGYGLDLVTYNIVLDILGHTGHMDEMLDVFASIKNTSFIPDIVSYNTLING 254
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L+KI R D+C +YF+EM E+G++PDLLTYTALI+ FGR+GN+EESL+ F +MK + + PS
Sbjct: 255 LQKIGRFDMCFLYFKEMTENGVEPDLLTYTALIEIFGRSGNVEESLKCFREMKLKGVLPS 314
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
IY+YRSLI NL K GKV+LA + EE+NSS + LAGP+DFK+K R
Sbjct: 315 IYIYRSLIHNLTKTGKVELATELLEELNSSSTCLAGPEDFKQKRR 359
>gi|449524124|ref|XP_004169073.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Cucumis sativus]
Length = 363
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/281 (52%), Positives = 209/281 (74%), Gaps = 3/281 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+K+C+ G+++AA LL+SL + +F + AY+ VL+A++E D L ++ K L+S +
Sbjct: 83 IDKICRLGHLAAAAHLLKSLCSEKVFKSSEAYDMVLLAASERGDTPLLCEVFKVALLSCK 142
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+LSS Y +FARAF T+D ++LL ++E+++I S + IV+NRIIFAF++ R+I+KA
Sbjct: 143 SLSSASYMSFARAFTKTND-SKLLECVKEIIEITS-QKCIVINRIIFAFSERREIDKAFQ 200
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF+ +K L C PDL TYNI+LD++GR GRV+++L+ F SMKE G+ PD +SYNTL+N+LR
Sbjct: 201 IFNQMKCLSCTPDLYTYNIILDMVGRAGRVDEILHIFVSMKEEGIAPDIVSYNTLINSLR 260
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K+ RLD+ +IYFREM GI+PDLLTYTALI+S+GR GN+EE+L L +MK IRPS Y
Sbjct: 261 KVGRLDISVIYFREMVAMGIEPDLLTYTALIESYGRFGNLEEALTLLKEMKLNNIRPSSY 320
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRK 285
+YRSLI N M KV+LA + EM S S+LA P+DFKR+
Sbjct: 321 IYRSLIRNSMTMKKVELATDLLNEMKLSKSELARPEDFKRR 361
>gi|242088279|ref|XP_002439972.1| hypothetical protein SORBIDRAFT_09g023670 [Sorghum bicolor]
gi|241945257|gb|EES18402.1| hypothetical protein SORBIDRAFT_09g023670 [Sorghum bicolor]
Length = 377
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
C YIE LC++GN+ AVR+L+ L D+ + + + +N +L +AE N L ++ + LL
Sbjct: 84 CASYIENLCRSGNLVDAVRVLRQLHDEQVHVSLHTFNMLLQHTAEANIFTLFAKVFRYLL 143
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S S Y N A+A DDC +L F+ E+++I V+NRIIFA A+ I+
Sbjct: 144 LSKLAPDSTSYMNVAKALQKLDDCELILKFVRELLEITHHRDPTVMNRIIFATAQYGHID 203
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K+L+IF+ +K + D++T+N VLD+LG+ GRV++ML+E M+E G PD ++YNTL
Sbjct: 204 KSLVIFEELKKYQTSLDVVTFNTVLDMLGKAGRVDEMLHEVKLMEELGHFPDIVTYNTLT 263
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N LR++ RLDLC +F EM E GI PDL TYTALIDSFGR+G+I ++L +F MK+ +
Sbjct: 264 NCLRRLGRLDLCKRFFGEMLERGIAPDLRTYTALIDSFGRSGHITDALEMFQKMKKSH-Q 322
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRK 285
PS+YVYR+LI NLKK G+ +LA + E+M+SS S+L GP+DFK K
Sbjct: 323 PSVYVYRALISNLKKAGQFELAEKLTEDMSSSASELIGPEDFKPK 367
>gi|226491042|ref|NP_001143211.1| uncharacterized protein LOC100275714 [Zea mays]
gi|195615844|gb|ACG29752.1| hypothetical protein [Zea mays]
Length = 377
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 132/283 (46%), Positives = 190/283 (67%), Gaps = 2/283 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
C Y+E LC++GN+ AVR+L+ L D+ I + + +N +L +AE N L ++ + LL
Sbjct: 84 CAAYVENLCRSGNLVDAVRVLRHLHDEQIHVGLHTFNMLLQHTAEANIFTLFAKVFRYLL 143
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S T S Y N A A DDC +L F+ E+++I V+NRIIFA AK I+
Sbjct: 144 LSELTPDSTSYMNVALALQKLDDCELILKFVREILEITHSRDATVMNRIIFATAKYGHID 203
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K+L+IF+ +K + D++T+N VLD+LG+ GRV+ ML E M++ PD ++YNTL+
Sbjct: 204 KSLVIFEELKKYETSLDVVTFNTVLDMLGKAGRVDQMLGEVKLMEKLRHFPDIVTYNTLI 263
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N LR++ RLDLC + EM E GI PDL TYTALIDSFGR+G+I E+L +F++MK+ +
Sbjct: 264 NCLRRLGRLDLCKRFALEMVERGITPDLRTYTALIDSFGRSGHITEALEMFHEMKKSH-Q 322
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFK 283
PS+YVYR+L NLKK G+ +LA + E+MNSS S+L GP+DFK
Sbjct: 323 PSVYVYRALTSNLKKAGQFELAQKLTEDMNSSASELIGPEDFK 365
>gi|238015042|gb|ACR38556.1| unknown [Zea mays]
gi|413945770|gb|AFW78419.1| hypothetical protein ZEAMMB73_401277 [Zea mays]
Length = 377
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 189/283 (66%), Gaps = 2/283 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
C Y+E LC++GN+ AVR+L+ L D+ I + + +N +L +AE N L ++ + LL
Sbjct: 84 CAAYVENLCRSGNLVDAVRVLRHLHDEQIHVGLHTFNMLLQHTAEANIFTLFAKVFRYLL 143
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S T S Y N A A DDC +L F+ E+++I V+NRIIFA AK I+
Sbjct: 144 LSELTPDSTSYMNVALALQKLDDCEMILKFVREILEITHSRDATVMNRIIFATAKYGHID 203
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K+L+IF+ +K + D++T+N VLD+LG+ GRV+ ML E M++ PD ++YNTL+
Sbjct: 204 KSLVIFEELKKYETSLDVVTFNTVLDMLGKAGRVDQMLGEVKLMEKLRHFPDIVTYNTLI 263
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N +R++ RLDLC + EM E GI PDL TYTALIDSFGR+G+I E+L +F++MK+ +
Sbjct: 264 NCMRRLGRLDLCKRFALEMVERGITPDLRTYTALIDSFGRSGHITEALEMFHEMKKSH-Q 322
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFK 283
PS+YVYR+L NLKK G +LA + E+MNSS S+L GP+DFK
Sbjct: 323 PSVYVYRALTSNLKKAGHFELAQKLTEDMNSSASELIGPEDFK 365
>gi|218196986|gb|EEC79413.1| hypothetical protein OsI_20368 [Oryza sativa Indica Group]
Length = 433
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 129/284 (45%), Positives = 186/284 (65%), Gaps = 2/284 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
Y+EKLC +GN+ AV++L+ L D+ I + +N VL + E N+ L ++ + LL+
Sbjct: 97 TAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLGTFNLVLEQTGEVNNFVLFAKVFRYLLL 156
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S YTN A+A DD +L F+ +V++I V+NRI+F AK QI+K
Sbjct: 157 SKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDK 216
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L+IF+ +K + D++T+N +LD+LG+ GRV+ ML E M E G PD ++YNT++N
Sbjct: 217 CLIIFEELKKDQRGLDVVTFNTILDMLGKAGRVDQMLQEVKLMDELGHSPDIVTYNTVIN 276
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
LR++ RLD C I+ REM E GI PDL TYTALID FGR G+I E+L +F+ MK+ +P
Sbjct: 277 CLRRLGRLDQCKIFAREMVERGIDPDLRTYTALIDIFGRAGHITEALEMFDQMKRSH-QP 335
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRK 285
SIYVYR+LI +LKK G+ +LA + EEM +S S+L GP+DFK+K
Sbjct: 336 SIYVYRALISDLKKAGQFELAQKLSEEMKTSASELLGPEDFKQK 379
>gi|57863818|gb|AAW56871.1| unknown protein [Oryza sativa Japonica Group]
gi|222631991|gb|EEE64123.1| hypothetical protein OsJ_18955 [Oryza sativa Japonica Group]
Length = 433
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/284 (45%), Positives = 185/284 (65%), Gaps = 2/284 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
Y+EKLC +GN+ AV++L+ L D+ I + +N VL + E N+ L ++ + LL+
Sbjct: 97 TAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLGTFNLVLEQTGEVNNFVLFAKVFRYLLL 156
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S YTN A+A DD +L F+ +V++I V+NRI+F AK QI+K
Sbjct: 157 SKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDK 216
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L+IF+ +K + D++T+N +LD+LG+ GRV+ ML E M E G PD ++YNT++N
Sbjct: 217 CLIIFEELKKDQRGLDVVTFNTILDMLGKAGRVDQMLQEVKLMDELGHSPDIVTYNTVIN 276
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
LR++ RLD C I+ REM E GI PDL TYTALID FGR G+I E+L +F+ MK+ +P
Sbjct: 277 CLRRLGRLDQCKIFAREMVERGIDPDLRTYTALIDIFGRAGHITEALEMFDQMKRSH-QP 335
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRK 285
SIYVYR+LI +LKK G+ +LA + EEM +S S+L GP+DFK K
Sbjct: 336 SIYVYRALISDLKKAGQFELAQKLSEEMKTSASELLGPEDFKHK 379
>gi|215704820|dbj|BAG94848.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766880|dbj|BAG99108.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 389
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/284 (45%), Positives = 185/284 (65%), Gaps = 2/284 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
Y+EKLC +GN+ AV++L+ L D+ I + +N VL + E N+ L ++ + LL+
Sbjct: 97 TAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLGTFNLVLEQTGEVNNFVLFAKVFRYLLL 156
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S YTN A+A DD +L F+ +V++I V+NRI+F AK QI+K
Sbjct: 157 SKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDK 216
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L+IF+ +K + D++T+N +LD+LG+ GRV+ ML E M E G PD ++YNT++N
Sbjct: 217 CLIIFEELKKDQRGLDVVTFNTILDMLGKAGRVDQMLQEVKLMDELGHSPDIVTYNTVIN 276
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
LR++ RLD C I+ REM E GI PDL TYTALID FGR G+I E+L +F+ MK+ +P
Sbjct: 277 CLRRLGRLDQCKIFAREMVERGIDPDLRTYTALIDIFGRAGHITEALEMFDQMKRSH-QP 335
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRK 285
SIYVYR+LI +LKK G+ +LA + EEM +S S+L GP+DFK K
Sbjct: 336 SIYVYRALISDLKKAGQFELAQKLSEEMKTSASELLGPEDFKHK 379
>gi|297724211|ref|NP_001174469.1| Os05g0481800 [Oryza sativa Japonica Group]
gi|255676452|dbj|BAH93197.1| Os05g0481800 [Oryza sativa Japonica Group]
Length = 438
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/284 (45%), Positives = 185/284 (65%), Gaps = 2/284 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
Y+EKLC +GN+ AV++L+ L D+ I + +N VL + E N+ L ++ + LL+
Sbjct: 97 TAYVEKLCTSGNLPDAVQILRHLHDRKIHVGLGTFNLVLEQTGEVNNFVLFAKVFRYLLL 156
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S YTN A+A DD +L F+ +V++I V+NRI+F AK QI+K
Sbjct: 157 SKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDK 216
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L+IF+ +K + D++T+N +LD+LG+ GRV+ ML E M E G PD ++YNT++N
Sbjct: 217 CLIIFEELKKDQRGLDVVTFNTILDMLGKAGRVDQMLQEVKLMDELGHSPDIVTYNTVIN 276
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
LR++ RLD C I+ REM E GI PDL TYTALID FGR G+I E+L +F+ MK+ +P
Sbjct: 277 CLRRLGRLDQCKIFAREMVERGIDPDLRTYTALIDIFGRAGHITEALEMFDQMKRSH-QP 335
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRK 285
SIYVYR+LI +LKK G+ +LA + EEM +S S+L GP+DFK K
Sbjct: 336 SIYVYRALISDLKKAGQFELAQKLSEEMKTSASELLGPEDFKHK 379
>gi|326527435|dbj|BAK07992.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 361
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 174/268 (64%), Gaps = 2/268 (0%)
Query: 21 LLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFI 79
+L+ LRD+ I L + +N +L + E +D L ++ + LL+S Y ARA
Sbjct: 86 ILRRLRDEQISLGLSTFNLLLKRACEADDFALFAKVFRHLLLSKAAPDLTSYMCVARAIG 145
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
DD LL F+ EV++I + V NRI+FA ++K L++F+ +K + D++
Sbjct: 146 GLDDSELLLGFVREVLEITNGRGPTVANRIVFAVGTYGHLDKCLIVFEELKKDRRCLDVV 205
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
T+N VLD+LG+VGRV++ML E M+E G+ PD ++YNT++N LR++ RL LC + REM
Sbjct: 206 TFNTVLDMLGKVGRVDEMLCEVKLMEELGISPDIVTYNTVINCLRRLGRLGLCKSFAREM 265
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
E GI PDL TYTALID FGR G+I ++L F MK+ +PSIYVYR+LI ++KK G+
Sbjct: 266 FERGISPDLRTYTALIDCFGRAGHIADALEAFEQMKKSH-QPSIYVYRALISDMKKAGRF 324
Query: 260 DLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
+LA + +EMNSS DL GP+DF++K++
Sbjct: 325 ELAEKLADEMNSSAPDLLGPEDFRQKSK 352
>gi|357129833|ref|XP_003566565.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Brachypodium distachyon]
Length = 371
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 167/273 (61%), Gaps = 2/273 (0%)
Query: 14 NVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT 72
+ +A V L L + I L +N +L + E D ++ + LL+S Y
Sbjct: 90 DPAAMVGTLGRLHGEQIHLGLGTFNPLLRQACEAGDFAHFAKVFRHLLLSKAAPDLTSYM 149
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
ARA +D +L F+ E+++I VVNRIIFA + I+K+L++F +K
Sbjct: 150 YVARALGDLEDPELMLKFVREILEITHGRGPTVVNRIIFAAGRYGHIDKSLIMFQELKRD 209
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
+ D++T+N VLD+LG+ GRV+ ML+E M E G PD ++YNT++N LR + R DLC
Sbjct: 210 QRCLDVVTFNTVLDMLGKAGRVDQMLHEVKLMDELGHSPDIVTYNTVINCLRWLGRFDLC 269
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ EM + GI PDL TY+ALID FGR G I E+L +F +MK+ +PSIY+YR+LI +
Sbjct: 270 KSFATEMFDRGICPDLRTYSALIDGFGRAGRITEALEVFEEMKKSH-QPSIYIYRALISD 328
Query: 253 LKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRK 285
LKK G+++LA + EEMNS SDL GP+DFK+K
Sbjct: 329 LKKAGRIELAQKLLEEMNSRASDLLGPEDFKQK 361
>gi|255639677|gb|ACU20132.1| unknown [Glycine max]
Length = 276
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 144/201 (71%), Gaps = 1/201 (0%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVS 62
GYI+K+ KAGN+S A ++L+ L DKNI + + YN +LV +++ NDIDLS Q+ + LL+S
Sbjct: 75 GYIDKIRKAGNLSVASKMLEILNDKNIVVTLDVYNLILVEASQKNDIDLSSQVFRKLLLS 134
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ S+ FA+AF +DC +LL F+EE+ +I + +N+IIFAFAK Q +K+
Sbjct: 135 CESPSATSCLKFAQAFSKVNDCVELLRFLEEISEITCSSTSSFINKIIFAFAKCGQRDKS 194
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L+IFDH+K DL+TYNIVLDILGR GRV++ML+ FAS+K+ G VPD +SYNTL+N
Sbjct: 195 LVIFDHLKRQGYGLDLVTYNIVLDILGRTGRVDEMLDVFASIKDTGFVPDTVSYNTLING 254
Query: 183 LRKIRRLDLCLIYFREMGESG 203
LRK R D+C +YF+EM E G
Sbjct: 255 LRKAGRFDMCFVYFKEMTEKG 275
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N ++ K + D L+ F + G DL+TY ++D GRTG ++E L +F +K
Sbjct: 179 NKIIFAFAKCGQRDKSLVIFDHLKRQGYGLDLVTYNIVLDILGRTGRVDEMLDVFASIKD 238
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P Y +LI+ L+K G+ D+ F+EM
Sbjct: 239 TGFVPDTVSYNTLINGLRKAGRFDMCFVYFKEMT 272
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 147/305 (48%), Gaps = 40/305 (13%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIF------------------LPNAYNCVLVA 42
M NG L K+ V A +L+ S++++NI L A+N
Sbjct: 709 MVNG----LVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKM 764
Query: 43 SAETNDIDL-SFQILKDLLVSSRTLSSD-----------------CYTNFARAFIMTDDC 84
+ E ++ D+ ++ L D+L LS Y++ +
Sbjct: 765 TEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRV 824
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
+ F E + ++ V + +I +F K +++AL +F+ ++ +C P+++TYN +
Sbjct: 825 EEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNL 884
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
L L + GR+N M++ G VPD ++YN L++ + K+ +D YF+ M E GI
Sbjct: 885 LSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGI 944
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD++T+T+LI+S G+ + E+ LF+ M+++ PS+ Y LID L + GKV A
Sbjct: 945 VPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAM 1004
Query: 265 IFEEM 269
IF EM
Sbjct: 1005 IFHEM 1009
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 36/263 (13%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCK+ +V A+ + ++++ + L Y +L + + ID + QI +L SS L
Sbjct: 643 LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESS--LV 700
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
D + V N ++ KS ++++A + D
Sbjct: 701 PDTF---------------------------------VYNIMVNGLVKSNRVDEACKLVD 727
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K PDL TY +LD LG+ GR+ + N F M E G PD ++Y +L++ L K
Sbjct: 728 SMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGG 787
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+L LI FR M + PD++TY++LIDS G+ G +EE+ F + + P++ VY
Sbjct: 788 KLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYS 847
Query: 248 SLIDNLKKMGKVDLAMTIFEEMN 270
SLID+ K G VD A+ +FEEM
Sbjct: 848 SLIDSFGKKGMVDRALELFEEMQ 870
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 103/179 (57%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
I+E+++ + +I A KS I++A F+ +K L+C P+++TY +++ L +
Sbjct: 310 IQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAK 369
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GR+ + F MKE PD I+YNTL++ L K D+ F+EM + G+ P+L T
Sbjct: 370 AGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRT 429
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I G+ G E+ +LF+D+K+Q P ++ Y +LID L K G++D + I +EM
Sbjct: 430 YNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEM 488
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 127/235 (54%), Gaps = 3/235 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
L K G +S A+ + +++ K +P+ Y+ ++ + + ++ ++ ++ + T
Sbjct: 783 LGKGGKLSHALIIFRAMAKKRC-VPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTP 841
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ Y++ +F + L EE+ + P +I+ N ++ AK+ ++ A +
Sbjct: 842 NVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLL 901
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ ++ + C PDL+TYNI++D +G++G V++ + F MKE G+VPD I++ +L+ +L K+
Sbjct: 902 EEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKV 961
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L F M E G P ++TY LID GR G + E+ +F++MK + P
Sbjct: 962 DKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G+V AV+LL+ ++ K+ +P Y ++ + +D + +L+++ S
Sbjct: 542 GHVDEAVKLLEVMK-KHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVT 600
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y++ +F D + L +E+V+ + + +I KS +++AL +F +K
Sbjct: 601 YSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMK 660
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+P L Y +L L + +++ L F ++E+ +VPD YN ++N L K R+D
Sbjct: 661 EEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVD 720
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
M I PDL TYT+L+D G++G +EE+ +F M ++ P + Y SL+
Sbjct: 721 EACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLM 780
Query: 251 DNLKKMGKVDLAMTIFEEM 269
D L K GK+ A+ IF M
Sbjct: 781 DVLGKGGKLSHALIIFRAM 799
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 120/236 (50%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ A +D + ++L+ + + YT + + + E+
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ S++ + ++ +F K Q E++L +FD + C D+ TY++V++ L + V
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ L+ F MKE G+ P +Y TLL++L K ++D L F E+ ES + PD Y +
Sbjct: 650 DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ ++ ++E+ +L + MK Q I P ++ Y SL+D L K G+++ A +F +M
Sbjct: 710 VNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT 765
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 143/302 (47%), Gaps = 42/302 (13%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLS---FQILKDL 59
++ ++G + A +Q + I P + ++ A ++ +ID + F +K+L
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGID-PGVHTFTVLIDALVKSGNIDEACKFFNGMKNL 351
Query: 60 LVSSRTLSSDCYTN-FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S ++ N A+A + + C +F+E SP++I N +I K+ +
Sbjct: 352 RCSPNVVTYTTLVNGLAKAGRLEEACE---VFVEMKENNCSPDAI-AYNTLIDGLGKAGE 407
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A +F +K P+L TYNI++ +LG+ GR + F +KE G VPD +YNT
Sbjct: 408 ADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNT 467
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIK------------------------PDL------ 208
L++ L K ++D L +EM E G + P L
Sbjct: 468 LIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLG 527
Query: 209 -LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+TY L+ +F G+++E+++L MK+ + P++ Y +L+D L K G++D A+++
Sbjct: 528 EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLR 587
Query: 268 EM 269
EM
Sbjct: 588 EM 589
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 93/168 (55%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ ++ ++ F + + AL IF+ +K C P YN VL++L + G + + F
Sbjct: 216 SMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVF 275
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ + + PD ++ +++ + RLD +EM +SGI P + T+T LID+ ++
Sbjct: 276 GKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKS 335
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
GNI+E+ + FN MK + P++ Y +L++ L K G+++ A +F EM
Sbjct: 336 GNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEM 383
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
Y ++ A + D QIL + +S T+ R F T++ + L +
Sbjct: 183 GTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQ 242
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ S + N ++ K A+++F + + +PD T+ I + R GR
Sbjct: 243 MKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGR 302
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++ M ++G+ P ++ L++ L K +D +F M P+++TYT
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTT 362
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L++ + G +EE+ +F +MK+ P Y +LID L K G+ D+A +F+EM
Sbjct: 363 LVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 141/303 (46%), Gaps = 34/303 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ L KAG A L + ++D+ + +PN YN ++ + ++Q+ DL
Sbjct: 396 NTLIDGLGKAGEADMACGLFKEMKDRGL-VPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQI-----------ASPESII----- 104
Y ++L I+E+V+ A E I
Sbjct: 455 EQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADR 514
Query: 105 ---------------VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
N ++ AF + +++A+ + + +K +C P ++TY ++D LG
Sbjct: 515 TVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLG 574
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ GR+++ ++ M++ G P ++Y++L+ + K + + L F EM G D+
Sbjct: 575 KAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVS 634
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ +I+ ++ +++++L +F MK++ + P + Y++L+ +L K K+D A+ IF E+
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694
Query: 270 NSS 272
S
Sbjct: 695 QES 697
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 3/239 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
M N +E L K G +AV + L I P+A + + + + +D + + +++
Sbjct: 254 MYNFVLELLVKGGFYHSAVIVFGKLGQFRI-QPDAQTFRIFVHSFNRSGRLDPAAEPIQE 312
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ S +T A + + + + F + + +++ ++ AK+ +
Sbjct: 313 MIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGR 372
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A +F +K C PD I YN ++D LG+ G + F MK+ G+VP+ +YN
Sbjct: 373 LEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNI 432
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ L K R F ++ E G PD+ TY LID G+ G +++ L + +M ++
Sbjct: 433 MISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEK 491
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 139/276 (50%), Gaps = 5/276 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I L K G A +L Q ++ + P++ + ++ A + +D + ++L ++
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRG-RKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F D + ++E+ + ++ + +I K+ Q+++A
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ C PD ITYN +++ LG+ G +ND F MK G PD ++Y+TL+ L
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL 369
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R++ + F EM GI+PDL TY ++I G+ G ++++ RLF++M+ + + P +
Sbjct: 370 GKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDV 429
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS--LSDLA 277
Y + +++L + G+ A IFE+M S L D+A
Sbjct: 430 ITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVA 465
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ L KAG A+RLL +RD N +P+ YNC++ + + +F + ++
Sbjct: 83 NTLVDCLGKAGQFDEALRLLAEMRD-NGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMR 141
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + + +EE+ + P ++ + +I K +
Sbjct: 142 ERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETV 201
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA +F +K KPD IT+ ++D LG+ GRV+D L MKE GV P ++YN L+
Sbjct: 202 KAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI 261
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K+ L EM +G KPD++TY+ LI + ++E+ ++ M+++
Sbjct: 262 AGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCP 321
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P Y +LI+ L K G ++ A +F+ M S
Sbjct: 322 PDTITYNTLINGLGKAGLLNDAGRLFDRMKS 352
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 22 LQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTN-FARAFIM 80
++ N+ N+ L + + + L F+ LK + +S C N RA
Sbjct: 1 MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRA--- 57
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
L + E+ ++ N ++ K+ Q ++AL + ++ C PD+ T
Sbjct: 58 -GKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRT 116
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN ++ LG+ GR+++ FA M+E G VPD +YN+L+ L K+ R + EM
Sbjct: 117 YNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEME 176
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
G PD++TY++LI G+ G ++ +LF +MK++ +P + +L+D L K G+VD
Sbjct: 177 RHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVD 236
Query: 261 LAMTIFEEM 269
A+ + +EM
Sbjct: 237 DALELLDEM 245
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L KAG V A+ LL ++++ + P YN ++ + D+ ++ +L ++ +
Sbjct: 226 MDALGKAGRVDDALELLDEMKERGV-KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ I + ++++ + P I N +I K+ + A
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD +K C PD++TY+ ++ LG+ RV F M+ G+ PD +Y +++ L
Sbjct: 345 RLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D F EM G+ PD++TY A ++S GR G +E+ ++F DMK+ + P +
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +L+ L K +VD A + +E+
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKEL 490
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I L K G A+ LL+ + +++ P+ Y+ ++ + + +F++ +++
Sbjct: 153 NSLIYGLGKVGRSQKAMELLEEM-ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK 211
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R S +T A L ++E+ + ++ N +I F K +
Sbjct: 212 RRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLV 271
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D +K CKPD++TY+ ++ L + ++++ M++ G PD I+YNTL+
Sbjct: 272 EAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLI 331
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K L+ F M G PD++TY+ LI + G+ +E + LF +M+ I+
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ 391
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P ++ Y S+I L K G+VD A +F EM
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEM 420
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 135/340 (39%), Gaps = 73/340 (21%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL- 59
N I K G++ A LL ++ +N P+ Y+C++ + + +D + Q+LK +
Sbjct: 258 NALIAGFGKVGDLVEAYNLLDEMK-RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKME 316
Query: 60 -------------LVSS---------------RTLSSDC------YTNFARAFIMTDDCT 85
L++ R S C Y+ A
Sbjct: 317 KEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVE 376
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ EE+ + + II K+ Q++ A +F ++G PD+ITYN L
Sbjct: 377 SACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFL 436
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR------------------ 187
+ LGR GR + F MKE+G++PD +Y+ LL L K +
Sbjct: 437 NSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCA 496
Query: 188 ----RLDLCLIYFREMG-------------ESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+ D CL G G+ P +Y ALID+ + G + E+
Sbjct: 497 FDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNT 556
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
D+K+Q +P I Y SLI L + G++D A + EEM+
Sbjct: 557 LEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMS 596
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-----CVLVASAETNDIDLSFQILKDLL 60
I L KA V +A L + + I P+ + VL + + +D D F ++
Sbjct: 366 ITALGKAARVESACVLFEEMESVGI-QPDLFTYCSIITVLGKAGQVDDADRLFSEMR--- 421
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ LS D Y F + + E++ + + + ++ +K+++
Sbjct: 422 --GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM--LNEFASMKEAGVVPDFISY 176
++ A + + C D + ++ L+IL G V++ L +FA+ K G+ P SY
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSK--GLWPGASSY 537
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ L K R+ ++ E G KPD+++Y++LI + G+TG I+ + L +M +
Sbjct: 538 NALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSK 597
Query: 237 QQIRPSIYVYRSLIDNLKKMG 257
+ ++ S Y +L+ L+ G
Sbjct: 598 RGLKLSPRSYSNLVRKLQDWG 618
>gi|449443592|ref|XP_004139561.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Cucumis sativus]
Length = 228
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 107/148 (72%), Gaps = 3/148 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+K+C+ G+++AA LL+SL ++ +F + AY+ VL+A++E D L ++ K L+S +
Sbjct: 83 IDKICRLGHLAAAAHLLKSLCNEKVFKSSEAYDMVLLAASERGDTPLLCEVFKVALLSCK 142
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+LSS Y +FARAF T+D ++LL ++E+++I S + IV+NRIIFAF++ R+I+KA
Sbjct: 143 SLSSASYMSFARAFTKTND-SKLLECVKEIIEITS-QKCIVINRIIFAFSERREIDKAFQ 200
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVG 152
IF+ +K L C PDL TYNI+LD++GR
Sbjct: 201 IFNQMKCLSCTPDLYTYNIILDMVGRAA 228
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 134/268 (50%), Gaps = 1/268 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+ LC AG S AV + + YN ++ ++++ +D + ++L++++ +
Sbjct: 17 LRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA 76
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y F + L +E++V P ++ +I K Q+++A +
Sbjct: 77 PNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRV 136
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
D + C+P++ITY ++D RVG ++ + M E G P+ I+YN +++ L
Sbjct: 137 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCS 196
Query: 186 IRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
R+LD L F+EM ESG PD+ TY+ ++DS ++G ++++ RL M + P++
Sbjct: 197 GRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVV 256
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y SL+ L K GK+D A + + M S
Sbjct: 257 TYSSLLHGLCKAGKLDEATALLQRMTRS 284
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 7/279 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCKAG + A LLQ + ++ PN YN ++ + ID ++ +L++++
Sbjct: 262 LHGLCKAGKLDEATALLQRMT-RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT AF + +E +V+ ++ N ++ F K ++E+A
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 380
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C P++++YN V+ L + +V++ + M VPD +++NT+++ +
Sbjct: 381 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPS 242
K R+D+ F + ESG P+L+TY +L+ ++ +++ L +M ++Q P
Sbjct: 441 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
I Y ++ID L K +VD A +F +M LSD P D
Sbjct: 501 IITYNTVIDGLCKSKRVDRAYKLFLQM---LSDGLAPDD 536
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 133/271 (49%), Gaps = 6/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G++ AV L++ + ++ + PNA YN ++ +D + Q+ K++ S
Sbjct: 156 VDGFCRVGDLDGAVELVRKMTERG-YRPNAITYNNIMHGLCSGRKLDSALQLFKEM-EES 213
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ D Y+ + + + +E +V +++ + ++ K+ ++++
Sbjct: 214 GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDE 273
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + C P+++TYN ++D ++GR+++ + M + G P+ ++Y LL+
Sbjct: 274 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD 333
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K + + + M E G P+L TY +L+D F + +E + +L + M Q+ P
Sbjct: 334 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 393
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ Y ++I L K KV + + E+M S+
Sbjct: 394 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 424
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 128/267 (47%), Gaps = 4/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK V A R++ + + PN Y ++ D+D + ++++ +
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGC-QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS-PESIIVVNRIIFAFAKSRQIEKA 122
++ Y N L +E+ + S P + + I+ + KS +++ A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + + C P+++TY+ +L L + G++++ M +G P+ ++YNT+++
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K+ R+D EM + G +P+++TYT L+D+F + G E+++ L M ++ P+
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y SL+D K +V+ A + M
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSM 386
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK V A +LL S+ K +PN +YN V+ + + +L+ +L
Sbjct: 364 NSLLDMFCKKDEVERACQLLSSMIQKGC-VPNVVSYNTVIAGLCKATKVHEGVLLLEQML 422
Query: 61 VSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ + A T D +L I+E +++ N ++ KSR
Sbjct: 423 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES---GCTPNLVTYNSLVHGLCKSR 479
Query: 118 QIEKA-LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ ++A L+ + + C PD+ITYN V+D L + RV+ F M G+ PD ++Y
Sbjct: 480 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 539
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ ++++L K R +D M ++G P +TY LID F +TGN++++L + +
Sbjct: 540 SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 599
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P + + ID L K G++ A + E M
Sbjct: 600 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 632
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + R C+ ++ E+ + P+S+ N +I +KS +++ A+ + + +
Sbjct: 13 HKSILRGLCDAGQCSDAVLHFREMSKTCPPDSV-TYNTMINGLSKSDRLDDAIRLLEEMV 71
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P++ +YN VL + RV + L M G PD +SY T++N L K+ ++D
Sbjct: 72 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M + G +P+++TY L+D F R G+++ ++ L M ++ RP+ Y +++
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 191
Query: 251 DNLKKMGKVDLAMTIFEEMNSSLS 274
L K+D A+ +F+EM S S
Sbjct: 192 HGLCSGRKLDSALQLFKEMEESGS 215
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 128/272 (47%), Gaps = 15/272 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L K+G V A RL++++ K PN Y+ +L + +D + +L+
Sbjct: 227 VDSLVKSGKVDDACRLVEAMVSKGCS-PNVVTYSSLLHGLCKAGKLDEATALLQ------ 279
Query: 64 RTLSSDCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
R S C N + D +L +EE+V +++ ++ AF K
Sbjct: 280 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 339
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ E A+ + + + P+L TYN +LD+ + V +SM + G VP+ +SYN
Sbjct: 340 KAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYN 399
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T++ L K ++ ++ +M + PD++T+ +ID+ +T ++ + LFN +++
Sbjct: 400 TVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 459
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y SL+ L K + D A + EM
Sbjct: 460 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 491
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 6/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCKA V V LL+ + N +P+ +N ++ A +T +D+++++ +
Sbjct: 399 NTVIAGLCKATKVHEGVLLLEQMLSNNC-VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV--QIASPESIIVVNRIIFAFAKSRQ 118
S T + Y + + Q + E+ Q SP+ II N +I KS++
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD-IITYNTVIDGLCKSKR 516
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F + PD +TY+IV+ L + +++ N M + G P I+Y T
Sbjct: 517 VDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT 576
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K LD L + + G PD++T++ ID + G + ++ L M +
Sbjct: 577 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG 636
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P Y +L+ + + A+ +FE M
Sbjct: 637 LVPDTVTYNTLLKGFCDASRTEDAVDLFEVM 667
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSF----QIL 56
N + LCK+ A LL+ + K P+ YN V+ ++ +D ++ Q+L
Sbjct: 469 NSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQML 528
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
D L S ++ + M D+ +L E +++ I +I F K+
Sbjct: 529 SDGLAPDDVTYSIVISSLCKWRFM-DEANNVL---ELMLKNGFDPGAITYGTLIDGFCKT 584
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++KAL I + PD++T++I +D L + GR+ +M AG+VPD ++Y
Sbjct: 585 GNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTY 644
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
NTLL R + + F M + G +PD TYT L+
Sbjct: 645 NTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Query: 29 NIFLPN--AYNCVLVASAET-NDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCT 85
N F+P +YN +L + + + ++ ++++ S +L+ Y R F +
Sbjct: 161 NGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLE 220
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
L F EE+ + +++ N +I A+ K ++I++A + + +P+L+TYN+V+
Sbjct: 221 MGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVI 280
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ L RVGR+ + A M G PD ++YNTL+N K+ L+ EM +G+
Sbjct: 281 NGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLP 340
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD++TYT+LI++ + GN+ ++ F+ M + +RP+ Y SLI+ + G +D A I
Sbjct: 341 PDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400
Query: 266 FEEM 269
++EM
Sbjct: 401 WDEM 404
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 125/261 (47%), Gaps = 7/261 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+ NGY CK GN A+ +L S +N P+ Y ++ + +++ + +
Sbjct: 314 LVNGY----CKVGNFHQAL-VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQ 368
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ V + YT+ F + +E+++ P +I+ N ++ S +
Sbjct: 369 MHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR 428
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A+ + ++G PD+++Y+ ++ R ++ A M E GV PD I+Y++
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSS 488
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ L + RRL+ F+EM + PD TYT+LI+ + + G++ E+L L ++M ++
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548
Query: 239 IRPSIYVYRSLIDNLKKMGKV 259
P Y LI+ L K +
Sbjct: 549 FLPDTVTYNVLINGLNKQART 569
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 139/308 (45%), Gaps = 43/308 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILK------ 57
I C AGN+ +R + + ++N LPN YN V+ A + ID +F++L+
Sbjct: 210 IRGFCAAGNLEMGLRFFEEM-ERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268
Query: 58 ---DLLVSSRTLSSDC--------------------------YTNFARAFIMTDDCTQLL 88
+LL + ++ C Y + + Q L
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD--HIKGLKCKPDLITYNIVLD 146
+ E+++ P ++ +I K+ + +A+ FD H++GL+ P+ +TY +++
Sbjct: 329 VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLR--PNGVTYTSLIN 386
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G +++ + M +G P ++YN LLN R++ + R M G+ P
Sbjct: 387 GFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D+++Y+ +I F R ++ + ++ +M ++ + P Y SLI L + +++ A +F
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLF 506
Query: 267 EEM-NSSL 273
+EM N SL
Sbjct: 507 QEMLNKSL 514
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 111/249 (44%), Gaps = 3/249 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CKAGN++ A+ + + + PN Y ++ ++ +D +++I +++ S
Sbjct: 350 INTMCKAGNLNRAMEFFDQMHVRGL-RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y ++ + + + + ++ + II F + +++++A
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD ITY+ ++ L R+N+ + F M ++PD +Y +L+N
Sbjct: 469 QMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K L+ L EM + G PD +TY LI+ + E+ RL + + P+
Sbjct: 529 CKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNG 588
Query: 244 YVYRSLIDN 252
Y +LI++
Sbjct: 589 ITYDTLIES 597
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 28/287 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG+ +K G + A R+ + ++ F P YN +L + ++ + +L+ +
Sbjct: 386 NGFSQK----GFMDEAYRIWDEMI-RSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM- 439
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ LS D Y+ F + + E+V+ I + +I + R+
Sbjct: 440 -EGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRR 498
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A +F + PD TY +++ + G +N+ LN M + G +PD ++YN
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558
Query: 179 LLNNL------RKIRRLDLCLIYFREMGESGIKPDLL----------TYTALIDSFGRTG 222
L+N L R+ +RL L L Y E +GI D L + ALI F G
Sbjct: 559 LINGLNKQARTREAKRLLLKLFY-DESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKG 617
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E+ ++F M ++ +P+ VY +I + G V A +++EM
Sbjct: 618 LMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEM 664
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/272 (17%), Positives = 109/272 (40%), Gaps = 18/272 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C +G + A+ LL+ + K + P+ +Y+ ++ ++D +FQ+ +++
Sbjct: 417 NALLNGHCVSGRMEEAIGLLRGMEGKGLS-PDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y++ + + +E++ + +I + K +
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLN 535
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + D + PD +TYN++++ L + R + + +P+ I+Y+TL+
Sbjct: 536 EALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLI 595
Query: 181 NNLRKIRRLDLCLI---------------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ I + + F M + KP+ Y +I R GN+
Sbjct: 596 ESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVH 655
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
++ +L+ +M P +L+ L G
Sbjct: 656 KAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 145/269 (53%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G AA+ LLQ + D N+ PN YN ++ + + ++ +F + +++ S
Sbjct: 197 IHGLCKVGETRAALDLLQRV-DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMI--S 253
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +S D Y+ F + + +F + +++ P+ + N ++ AF K +++
Sbjct: 254 KGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPD-VYTFNILVNAFCKDGKMK 312
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +FD + KP+ +TYN ++D V VN + F +M + GV PD SY+ ++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N KI++ D + F+EM I PD++TY++LID ++G I +L+L + M + +
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+I Y S++D L K+ +VD A+ + ++
Sbjct: 433 PTIRTYNSILDALCKIHQVDKAIALLTKL 461
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N + L K+ + + L Q + + I PN NC ++ + + I +F + +L
Sbjct: 89 NKILGSLVKSKHYHTVLYLSQKMEFRGI-KPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +T + + Q +F ++VV + I +I K +
Sbjct: 148 KMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + G +P+++ YN ++D + +V VN+ + F+ M G+ PD ++Y+ L+
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALI 267
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + +L+ + F +M IKPD+ T+ L+++F + G ++E +F+ M +Q I+
Sbjct: 268 SGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y SL+D + +V+ A +IF M
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 87/161 (54%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K ++ ++A+ +F + PD++TY+ ++D L + GR++ L M + G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V P +YN++L+ L KI ++D + ++ + GI+P++ TY+ LI ++G +E++
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++F + + ++ Y +I G + A+ + +M
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKM 531
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 5/225 (2%)
Query: 52 SFQILKD-----LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
SFQ LK+ + SS ++ Y++ + F +D + +++ +
Sbjct: 29 SFQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEF 88
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N+I+ + KS+ L + ++ KP+L+ NI+++ ++G + + FA + +
Sbjct: 89 NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G VPD I++ TL+ L ++ ++ ++ G D ++Y LI + G
Sbjct: 149 MGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+L L + ++P++ +Y ++ID++ K+ V+ A +F EM S
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMIS 253
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ + +I +KS +I AL + D + P + TYN +LD L ++ +V+ +
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K+ G+ P+ +Y+ L+ L + +L+ F + G ++ TYT +I F G
Sbjct: 460 KLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEG 519
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+L L + M+ P Y +I +L K + D+A + EM
Sbjct: 520 LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 71/154 (46%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L ++++ P +I N I+ A K Q++KA+ + +K +P++ TY+I++
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + G++ D F + G + +Y ++ + L +M ++G PD
Sbjct: 480 LCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
TY +I S + + + +L +M + +RP
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K+G +S A++L+ + D+ + P YN +L A + + +D + +L L
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGV-PPTIRTYNSILDALCKIHQVDKAIALLTKL--KD 463
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + + YT I I+ + Q E +R++ + L
Sbjct: 464 KGIQPNMYT--------------YSILIKGLCQSGKLED-------------ARKVFEGL 496
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L+ KG D TY I++ G N+ L + M++ G +PD +Y ++ +L
Sbjct: 497 LV----KGHNLNVD--TYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Query: 184 RKIRRLDLCLIYFREMGESGIKP 206
K D+ REM G++P
Sbjct: 551 FKKDENDMAEKLLREMIARGVRP 573
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 140/266 (52%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G++ AV L++ + ++ + PNA YN ++ ND++ + Q+L+ ++ +
Sbjct: 342 VDGFCRVGDLDGAVELVRKMTERG-YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ F + +E++++ + ++ +I A K+ I+ A
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ G+ C PD++ Y+I++ L + R+ + + M + PD ++YN++++ L
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RR++ + F M +G+ PD++TY+ +I SF + N++ + ++ MK+ + P +
Sbjct: 521 CKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDV 580
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L K G VD A +F+EM
Sbjct: 581 VTYSALINGLCKAGTVDKAFDVFQEM 606
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 7/279 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCKAG + A LLQ + ++ PN YN ++ + ID ++ +L++++
Sbjct: 990 LHGLCKAGKLDEATALLQRMT-RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 1048
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT AF + +E +V+ ++ N ++ F K ++E+A
Sbjct: 1049 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 1108
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C P++++YN V+ L + +V++ + M VPD +++NT+++ +
Sbjct: 1109 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 1168
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPS 242
K R+D+ F + ESG P+L+TY +L+ ++ +++ L +M ++Q P
Sbjct: 1169 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 1228
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
I Y ++ID L K +VD A +F +M LSD P D
Sbjct: 1229 IITYNTVIDGLCKSKRVDRAYKLFLQM---LSDGLAPDD 1264
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLV-ASAETNDIDLSFQILKDLLVSSR 64
I CKAG + A LL+ + + A L+ A + ID + ++L+
Sbjct: 412 ISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLR------M 465
Query: 65 TLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ DC Y+ A + +++ +V+ ++ N ++ KSR+
Sbjct: 466 SIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I A L+FD ++ PD++TY+IV+ + ++ MKEA VPD ++Y+
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K +D F+EM G P+L+TY LID + +E++ + M++Q
Sbjct: 586 LINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y LI+ L +++ A + EM
Sbjct: 646 CTPDSITYTCLINGLCNASRLEEAWRVLREM 676
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 132/273 (48%), Gaps = 10/273 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I LC+AG++ A LL+ + +N+ L +N V+ +D + ++ K++
Sbjct: 884 IHGLCRAGDIGTAYELLKEMPRHGVPQNVIL---HNVVIKGLCSARKLDSALELFKEM-E 939
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + D Y+ + + + +E++V +++ + ++ K+ ++
Sbjct: 940 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A + + C P+++TYN ++D ++GR+++ + M + G P+ ++Y L
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 1059
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ K + + + M E G P+L TY +L+D F + +E + +L + M Q+
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 1119
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y ++I L K KV + + E+M S+
Sbjct: 1120 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK V A +LL S+ K +PN +YN V+ + + +L+ +L
Sbjct: 1092 NSLLDMFCKKDEVERACQLLSSMIQKGC-VPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150
Query: 61 VSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ + A T D +L I+E +++ N ++ KSR
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES---GCTPNLVTYNSLVHGLCKSR 1207
Query: 118 QIEKA-LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ ++A L+ + + C PD+ITYN V+D L + RV+ F M G+ PD ++Y
Sbjct: 1208 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 1267
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ ++++L K R +D M ++G P +TY LID F +TGN++++L + +
Sbjct: 1268 SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 1327
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P + + ID L K G++ A + E M
Sbjct: 1328 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 120/261 (45%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+ LC AG S AV + + YN ++ ++++ +D + ++L++++ +
Sbjct: 203 LRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA 262
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y F + L +E++V P ++ +I K Q+++A +
Sbjct: 263 PNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRV 322
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
D + C+P++ITY ++D RVG ++ + M E G P+ I+YN +++ +
Sbjct: 323 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCR 382
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
++ + M ++G PD + Y+ +I F + G + E+ L M ++ RP +
Sbjct: 383 RNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVAC 442
Query: 246 YRSLIDNLKKMGKVDLAMTIF 266
+LID L K +D A +
Sbjct: 443 LSTLIDALCKAAAIDSAQELL 463
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ + +I +F K ++ A + + +K KC PD++TY+ +++ L + G V+ + F
Sbjct: 545 VVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQ 604
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G P+ ++YNTL++ L KI +++ M + PD +TYT LI+
Sbjct: 605 EMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNAS 664
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+EE+ R+ +MK + P Y +L+ L+K ++L + +EM ++
Sbjct: 665 RLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEAT 714
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC A + +A+ L + + + P+ Y+ ++ + ++ +D + ++++D++
Sbjct: 916 NVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMV 975
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y++ + ++ + + +I+ N II K +I+
Sbjct: 976 SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 1035
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + + + C+P+++TY ++LD + G+ D + M E G VP+ +YN+LL
Sbjct: 1036 EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 1095
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K ++ M + G P++++Y +I + + E + L M
Sbjct: 1096 DMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV 1155
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I + ++ID + K +VD+A +F + S
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 1187
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 58 DLLVSSRTLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
D ++ R +S C Y +D + +EE+V ++ N ++
Sbjct: 214 DAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLH 273
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F K+ ++E AL + + + C PD+++Y V++ L ++ +V++ M + G P
Sbjct: 274 GFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP 333
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ I+Y TL++ ++ LD + R+M E G +P+ +TY ++ F R ++E + ++
Sbjct: 334 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVL 393
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M Q P Y ++I K GK+ A + E+M
Sbjct: 394 QMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQM 431
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 127/273 (46%), Gaps = 15/273 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L K+G V A RL++ + K PN Y+ +L + +D + +L+
Sbjct: 955 VDSLVKSGKVDDACRLVEDMVSKGCS-PNVVTYSSLLHGLCKAGKLDEATALLQ------ 1007
Query: 64 RTLSSDCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
R S C N + D +L +EE+V +++ ++ AF K
Sbjct: 1008 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 1067
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ E A+ + + + P+L TYN +LD+ + V +SM + G VP+ +SYN
Sbjct: 1068 KAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYN 1127
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T++ L K ++ ++ +M + PD++T+ +ID+ +T ++ + LFN +++
Sbjct: 1128 TVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 1187
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P++ Y SL+ L K + D A + EM
Sbjct: 1188 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 1220
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 6/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCKA V V LL+ + N +P+ +N ++ A +T +D+++++ +
Sbjct: 1127 NTVIAGLCKATKVHEGVLLLEQMLSNNC-VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV--QIASPESIIVVNRIIFAFAKSRQ 118
S T + Y + + Q + E+ Q SP+ II N +I KS++
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD-IITYNTVIDGLCKSKR 1244
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F + PD +TY+IV+ L + +++ N M + G P I+Y T
Sbjct: 1245 VDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT 1304
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K LD L + + G PD++T++ ID + G + ++ L M +
Sbjct: 1305 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG 1364
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P Y +L+ + A+ +FE M
Sbjct: 1365 LVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I L K+ + A+RLL+ + D N F PN +YN VL + N ++ + +L+ ++
Sbjct: 234 NTMINGLSKSDRLDDAIRLLEEMVD-NGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 292
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
YT D + +++++Q ++I ++ F + ++
Sbjct: 293 TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 352
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + + +P+ ITYN ++ + R + M + G PD I+Y+T++
Sbjct: 353 GAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTII 412
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +L +M G +PD+ + LID+ + I+ + L
Sbjct: 413 SGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCA 472
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y LI L K ++ A + + M
Sbjct: 473 PDVVAYSILIHALCKAKRLPEAESWLDVM 501
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSF----QIL 56
N + LCK+ A LL+ + K P+ YN V+ ++ +D ++ Q+L
Sbjct: 1197 NSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQML 1256
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
D L S ++ + M D+ +L E +++ I +I F K+
Sbjct: 1257 SDGLAPDDVTYSIVISSLCKWRFM-DEANNVL---ELMLKNGFDPGAITYGTLIDGFCKT 1312
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++KAL I + PD++T++I +D L + GR+ +M AG+VPD ++Y
Sbjct: 1313 GNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTY 1372
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
NTLL + + F M + G +PD TYT L+
Sbjct: 1373 NTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 42/299 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC A + A R+L+ ++DK LP+ Y +L A +TN+++L Q+LK++
Sbjct: 657 INGLCNASRLEEAWRVLREMKDKGC-LPDRMTYGTLLRALQKTNNLELVEQLLKEM---E 712
Query: 64 RTLSSDCYTNFAR--AFIMTDDC---------------TQLLIFIEEVVQIAS-PESIIV 105
T N AR F++ D T++L ++ Q + P V
Sbjct: 713 ATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRV 772
Query: 106 V---------NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
++I+ E A + G +T +V +L V +
Sbjct: 773 TAVATQGGFHHKIVRILNSRFAWEYAETALERFTGK------LTTTVVGKVLQGVRNGDA 826
Query: 157 MLNEF-ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
L F + + G D + N LL L +++R L +R + P++ T+T LI
Sbjct: 827 ALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILI 884
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
R G+I + L +M + + ++ ++ +I L K+D A+ +F+EM S S
Sbjct: 885 HGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
+ S I V+ RI+ + + + AL D +G ++ IV +L R+
Sbjct: 58 VGSDSPISVLERIVQGASDEQALRVAL---DEYRGQ------LSPEIVGKVLQRLIDPGA 108
Query: 157 MLN--EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
L E+A ++ G + N LLN L K + FR E D +TY+ L
Sbjct: 109 ALVFFEWAETRD-GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTL 167
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I F R G I + LF++M ++ ++ V++S++ L G+ A+ F EM+ +
Sbjct: 168 ISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT 225
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 8/277 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+AG + A+ + + D+ PN Y+ ++ + N + + ++L+ +
Sbjct: 83 NILVTGLCRAGKIETALEFFRKMDDR--CSPNVITYSVLIDGLCKANRVSQAVELLESM- 139
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+R S D YT + E++ +++ N ++ ++R+
Sbjct: 140 -KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 198
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ AL + + C P+++TY ++D L +VGRV D A M + G PD + YN
Sbjct: 199 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 258
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K ++D + R GIKPD++TY+++I R+ ++E+ RL +K +
Sbjct: 259 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 318
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
P + +Y +LID L K GKVD A ++E M D
Sbjct: 319 CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD 355
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK V+AA +L+ + D +PN YN +L + + +++D+
Sbjct: 155 VDGLCKESKVAAAWEVLREMLDAGC-VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG 213
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + Y + +++ +++ N +I K+ Q+++++
Sbjct: 214 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 273
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ KPD++TY+ V+ L R R+++ +K G PD I Y+TL++ L
Sbjct: 274 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 333
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D + M G D++TY+ LID + G ++E+ L M + PS
Sbjct: 334 CKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPST 393
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y SLI L + +D A+ + EEM S
Sbjct: 394 MTYNSLIKGLCDLNHLDEAIELVEEMERS 422
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+A VS A+ L++ + + PN Y ++ + + + +L D++
Sbjct: 187 NSLLHGLCRARRVSDALALMRDMTCRGC-TPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y D + + + V ++ + +I+ +S +++
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 305
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + ++K C PD+I Y+ ++D L + G+V++ + + M G D ++Y+TL+
Sbjct: 306 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLI 365
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R+D + M G P +TY +LI +++E++ L +M++
Sbjct: 366 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA 425
Query: 241 PSIYVYRSLIDNLKKMGKVD-LAMTIFEEM 269
PS Y LI + +M +VD A+ F+EM
Sbjct: 426 PSAVTYNILIHGMCRMERVDSAALDYFQEM 455
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N +I K+ + ++A +F+H+K ++C P ++TYN +LD L R G++ + F
Sbjct: 9 NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 68
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + D IS+N L+ L + +++ L +FR+M + P+++TY+ LID +
Sbjct: 69 QEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKA 126
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++ L MK + P + Y L+D L K KV A + EM
Sbjct: 127 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 174
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 57/279 (20%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILK------ 57
I+ LCK G V A +L + DK P+ YN ++ + + +D S +L+
Sbjct: 225 IDGLCKVGRVKDACAMLADMIDKG-GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283
Query: 58 ---DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
D++ S + C +N D+ +LL++++ P +I+ + +I
Sbjct: 284 IKPDVVTYSSVIYGLCRSN------RLDEACRLLLYVKSR---GCPPDVILYSTLIDGLC 334
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ ++++A +++ + G C D++TY+ ++D L + GRV++ A M G P +
Sbjct: 335 KAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 394
Query: 175 SYNTLLNNLRKIRRLD---------------------------LC---------LIYFRE 198
+YN+L+ L + LD +C L YF+E
Sbjct: 395 TYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQE 454
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
M ++G+ PD +TY+ L++ ++ ++ E L D Q
Sbjct: 455 MIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 493
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+P+++TYN ++D L + + F MK P ++YNTLL+ L + +L+ +
Sbjct: 6 CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 65
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
F+EM + D++++ L+ R G IE +L F M + P++ Y LID L
Sbjct: 66 ALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVLIDGL 123
Query: 254 KKMGKVDLAMTIFEEMNS 271
K +V A+ + E M +
Sbjct: 124 CKANRVSQAVELLESMKA 141
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M++ G P+ ++YN+L++ L K D F M P ++TY L+D RTG
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+E ++ LF +M ++ + + L+ L + GK++ A+ F +M+ S
Sbjct: 61 LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDRCS 110
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ L KAG A+ L + D F PN +YN + A +D + ++L+++
Sbjct: 265 NTAMDALGKAGQYDLALELFTEIEDHG-FAPNLVSYNTAIHACGRAGMVDRAHELLREMQ 323
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES-IIVVNRIIFAFAKSRQI 119
S S Y AF + L + E+ + + +I N + AK+ +
Sbjct: 324 GLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRW 383
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A + G +PD+++YN V+ GR G L+ F M+E GV PD +S+NT
Sbjct: 384 ERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTA 443
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ + + L REM I P++ +YT +D+ GR G E +L L +M+ + +
Sbjct: 444 MHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGV 503
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ Y + +D + G VD + + EEM+
Sbjct: 504 PANVHTYTAAMDACCRGGAVDRVLVLLEEMDG 535
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N + A K+ Q + AL +F I+ P+L++YN + GR G V+
Sbjct: 261 LVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLR 320
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES-GIKPDLLTYTALIDSFGRT 221
M+ V PD +SYNT++ K + L EM E+ G+ PDL++Y + +
Sbjct: 321 EMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKA 380
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G E + L + Q ++P + Y +++ + G+ A+ +F M
Sbjct: 381 GRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMM 428
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+VN +++ + R +AL + D + D++ + + + G+ R + L M
Sbjct: 196 LVNFVLYNCMRRRDWTRALTVLD---APLIEVDVVGFTMAIKACGQARRWREALGVLREM 252
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G+ PD +S+NT ++ L K + DL L F E+ + G P+L++Y I + GR G +
Sbjct: 253 QARGLRPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMV 312
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + L +M+ +RP Y +++ K + A+ + EM +
Sbjct: 313 DRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEA 360
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 104/257 (40%), Gaps = 2/257 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + K AA+ LL +++ P+ +YN + A+ + + ++L + L
Sbjct: 335 NTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEAL 394
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y A + Q L + ++ + N + A ++ + +
Sbjct: 395 GQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQ 454
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL I ++ P++ +Y I +D GR G L M+ GV + +Y +
Sbjct: 455 AALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAM 514
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + +D L+ EM G++P++++YT +D+ R G + + + M Q+ +R
Sbjct: 515 DACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLR 574
Query: 241 PSIYVYRSLIDNLKKMG 257
YR+ + + G
Sbjct: 575 LDSVSYRTALSTAGRAG 591
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 106/237 (44%), Gaps = 12/237 (5%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETND----IDLSFQILKDLLVSS 63
KAG A LL + + P+ +YN V+ A + +DL F +++++ V+
Sbjct: 378 AKAGRWERATELLTEALGQGL-QPDVVSYNTVMHACGRAGEYLQALDL-FGMMEEVGVAP 435
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+S + + + Q+L +E + +S + + A ++ + E+AL
Sbjct: 436 DRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIA---VDACGRAGEWERAL 492
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + ++ ++ TY +D R G V+ +L M GV P+ +SY ++ +
Sbjct: 493 ELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMDAM 552
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++ + D +M + G++ D ++Y + + GR G+ EE RL + + + R
Sbjct: 553 NRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGRAGD-EEGERLTKIVHESRQR 608
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 134/267 (50%), Gaps = 2/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ LCK G V AV LL +R K + YN ++ + ++ +L++++ S
Sbjct: 88 IDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCI 147
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
YT F + L E++V ++ + +I K ++++A+ +
Sbjct: 148 PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL 207
Query: 126 FDH-IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
F IK C P+ +TYN ++ R+G++++ +N M E G PD ++Y TL+N
Sbjct: 208 FGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFC 267
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K+ RLD +M G+ PD++T+T+L+D R + +++ + +M+++ P++Y
Sbjct: 268 KLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVY 327
Query: 245 VYRSLIDNLKKMGKVDLAMT-IFEEMN 270
Y +++D + +++ A + EEM+
Sbjct: 328 TYNTILDGYCRANQLEEARKFMLEEMD 354
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 60 LVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+V++ + S+D YT+ + Q LIF+ ++V + +I A
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A + + P+++TY +++D L + GRV++ + + M++ VP ++YN
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYN 119
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ L K R EM SG PD+ TYT LI F ++ +++LR+F + +
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
RP + Y LID L K G++ A+ +F M S S
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 11/269 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G + A+ L + +PN YN ++ +D + +L+ + +
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 64 RTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT F DD LL ++ + ++ ++ + ++
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLL---NQMTRKGLTPDVVTFTSLMDGLCRENRLS 308
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ I ++ C P + TYN +LD R ++ + +F ++E P+ +S+N ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA-RKFM-LEEMDCPPNVVSFNIMI 366
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQI 239
L K+ R + E PD++ YT +ID R ++E+ R++ M ++
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
P+ Y +LI L G +D A E+
Sbjct: 427 LPNSITYSTLITGLCNAGMLDRARGYIEK 455
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 47/236 (19%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ +S AV +L +R K+ P YN +L N ++
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCS-PTVYTYNTILDGYCRANQLEE------------ 344
Query: 64 RTLSSDCYTNFARAFIMTD-DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
AR F++ + DC P +++ N +I K + +A
Sbjct: 345 -----------ARKFMLEEMDC---------------PPNVVSFNIMIRGLCKVNRSSEA 378
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM-KEAGVVPDFISYNTLLN 181
+ + + + +C PD++ Y V+D L R +V++ + M +E G +P+ I+Y+TL+
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLIT 438
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L LD Y E G P++ TY LID+F + E++ L +DM Q+
Sbjct: 439 GLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 124/270 (45%), Gaps = 10/270 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G + A+ LL+ + + P+ Y ++ + +D ++ +L +
Sbjct: 225 NSLISGFCRMGKMDEAMNLLERMAETGSS-PDVVTYTTLMNGFCKLARLDDAYDLLNQMT 283
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T +T+ + + + + E+ + + ++ N I+ + ++ Q+E
Sbjct: 284 RKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++ + C P+++++NI++ L +V R ++ + + PD + Y T++
Sbjct: 344 EARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401
Query: 181 NNLRKIRRLD-LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L + +++D C +Y + + E G P+ +TY+ LI G ++ + ++
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGC 457
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+I Y LID +K + + A + ++M
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELLDDM 487
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 134/267 (50%), Gaps = 2/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ LCK G V AV LL +R K + YN ++ + ++ +L++++ S
Sbjct: 88 IDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCI 147
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
YT F + L E++V ++ + +I K ++++A+ +
Sbjct: 148 PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL 207
Query: 126 FDH-IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
F IK C P+ +TYN ++ R+G++++ +N M E G PD ++Y TL+N
Sbjct: 208 FGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFC 267
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K+ RLD +M G+ PD++T+T+L+D R + +++ + +M+++ P++Y
Sbjct: 268 KLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVY 327
Query: 245 VYRSLIDNLKKMGKVDLAMT-IFEEMN 270
Y +++D + +++ A + EEM+
Sbjct: 328 TYNTILDGYCRANQLEEARKFMLEEMD 354
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 60 LVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+V++ + S+D YT+ + Q LIF+ ++V + +I A
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A + + P+++TY +++D L + GRV++ + + M++ VP ++YN
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYN 119
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ L K R EM SG PD+ TYT LI F ++ +++LR+F + +
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
RP + Y LID L K G++ A+ +F M S S
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 114/269 (42%), Gaps = 11/269 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G + A+ L + +PN YN ++ +D + +L+ + +
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 64 RTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT F DD LL ++ + ++ ++ + ++
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLL---NQMTRKGLTPDVVTFTSLMDGLCRENRLS 308
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ I ++ C P + TYN +LD R ++ + +F ++E P+ +S+N ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA-RKFM-LEEMDCPPNVVSFNIMI 366
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQI 239
L K+ R + E PD++ YT +ID R ++E+ R++ M ++
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
P+ Y +L+ L G +D A E+
Sbjct: 427 LPNSITYSTLVTGLCNAGMLDRARGYIEK 455
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 47/236 (19%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ +S AV +L +R K+ P YN +L N ++
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCS-PTVYTYNTILDGYCRANQLEE------------ 344
Query: 64 RTLSSDCYTNFARAFIMTD-DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
AR F++ + DC P +++ N +I K + +A
Sbjct: 345 -----------ARKFMLEEMDC---------------PPNVVSFNIMIRGLCKVNRSSEA 378
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM-KEAGVVPDFISYNTLLN 181
+ + + + +C PD++ Y V+D L R +V++ + M +E G +P+ I+Y+TL+
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVT 438
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L LD Y E G P++ TY LID+F + E++ L +DM Q+
Sbjct: 439 GLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/270 (18%), Positives = 124/270 (45%), Gaps = 10/270 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G + A+ LL+ + + P+ Y ++ + +D ++ +L +
Sbjct: 225 NSLISGFCRMGKMDEAMNLLERMAETGSS-PDVVTYTTLMNGFCKLARLDDAYDLLNQMT 283
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T +T+ + + + + E+ + + ++ N I+ + ++ Q+E
Sbjct: 284 RKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++ + C P+++++NI++ L +V R ++ + + PD + Y T++
Sbjct: 344 EARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401
Query: 181 NNLRKIRRLD-LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L + +++D C +Y + + E G P+ +TY+ L+ G ++ + ++
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGC 457
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+I Y LID +K + + A + ++M
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELLDDM 487
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 143/268 (53%), Gaps = 9/268 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G AA+ LLQ + D N+ PN YN ++ + + ++ +F + +++ S
Sbjct: 197 IHGLCKVGETRAALDLLQRV-DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMV--S 253
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +S D Y+ F + + +F + +++ P+ + N ++ AF K +++
Sbjct: 254 KGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD-VYTFNILVNAFCKDGKMK 312
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +FD + KP+ +TYN ++D V VN + F +M + GV PD SY+ ++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N KI++ D + F+EM I PD++TY++LID ++G I +L+L + M + +
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
P+I Y S++D L K +VD A+ + +
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTK 460
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N + L K+ + + L Q + + I PN NC ++ + + I +F + +L
Sbjct: 89 NKILGSLVKSKHYHTVLYLSQKMEFRGI-KPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +T ++ + Q +F ++VV + I +I K +
Sbjct: 148 KMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + G +P+++ YN ++D + +V VN+ + F+ M G+ PD ++Y+ L+
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI 267
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + +L + F +M IKPD+ T+ L+++F + G ++E +F+ M +Q I+
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y SL+D + +V+ A +IF M
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 86/161 (53%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K ++ ++A+ +F + PD++TY+ ++D L + GR++ L M + G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V P+ +YN++L+ L K ++D + + + G +PD+ TY+ LI ++G +E++
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++F D+ + +Y Y +I G + A+ + +M
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKM 531
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 106/225 (47%), Gaps = 5/225 (2%)
Query: 52 SFQILKD-----LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
SFQ LK+ + SS ++ Y++ + F +D + +++ +
Sbjct: 29 SFQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEF 88
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N+I+ + KS+ L + ++ KP+L+ NI+++ ++G + + FA + +
Sbjct: 89 NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G VPD I++ TL L ++ ++ ++ G D ++Y LI + G
Sbjct: 149 MGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+L L + ++P++ +Y ++ID++ K+ V+ A +F EM S
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVS 253
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ + +I +KS +I AL + D + P++ TYN +LD L + +V+ +
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLT 459
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
K+ G PD +Y+ L+ L + +L+ F ++ G D+ YT +I F G
Sbjct: 460 KFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEG 519
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+L L + M+ P Y +I +L K + D+A + EM
Sbjct: 520 LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 35/152 (23%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L ++++ P +I N I+ A K+ Q++KA+ + K +PD+ TY+I++
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479
Query: 148 LGRVGRVND-------------------------------MLNE----FASMKEAGVVPD 172
L + G++ D + NE + M++ G +PD
Sbjct: 480 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+Y ++ +L K D+ REM G+
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 126/239 (52%), Gaps = 2/239 (0%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PNA +N ++ A ++N+++ + + +L+ + + Y + Q +
Sbjct: 864 PNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKI 923
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
EE++ + ++ N +I F KS +I+ A +F + +PDL +Y I+++ L
Sbjct: 924 FEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCI 983
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GR+++ + F +K G+ PD +SYN ++N L K RRLD L F EM GI PDL T
Sbjct: 984 TGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYT 1043
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ALI G G ++ +++++ +++ + PS++ Y +LI G D A ++F++M
Sbjct: 1044 YNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 135/269 (50%), Gaps = 10/269 (3%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
+I+ K+G+ + A+ ++++ + I +P+ A N L AET I + I DL
Sbjct: 451 FIDYYGKSGDPAKAIDTFETMKKRGI-MPSIAACNASLYTLAETGRISEAEDIFNDLHKC 509
Query: 63 SRTLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ S Y + + D TQLL E++ ++++N +I K+ ++
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLL---SEMISKGCEPDVMIINSLINTLYKAGRV 566
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A +F +K LK P ++TYNI+L LG+ G++ L F SM E+G P+ I++N+L
Sbjct: 567 DAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSL 626
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L K +DL L F M PD+LTY +I R G I+ + F+ MK + +
Sbjct: 627 LDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFL 685
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
P +LI + + G+V+ A+ + E
Sbjct: 686 SPDYVTLCTLIPGVVRHGRVEDAIKVVME 714
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
IE LCK+G+V A +L + K IF PN YN ++ + +D + ++L+++
Sbjct: 382 IEALCKSGDVDRAFDMLDVMTTKGIF-PNLHTYNTMICGLLKARRLDEALELLENMESLG 440
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y F + + D + + E + + SI N ++ A++ +I +A
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAE 500
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + PD +TYN+++ + G+++ + M G PD + N+L+N L
Sbjct: 501 DIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTL 560
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D F + + P ++TY L+ G+ G I ++L LF M + P+
Sbjct: 561 YKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNT 620
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ SL+D L K VDLA+ +F M
Sbjct: 621 ITFNSLLDCLSKNDAVDLALKMFCRM 646
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 113/220 (51%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ ++ K ++ S Y+ A D +++ +EE+ I +I I
Sbjct: 219 ALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIR 278
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A ++R+I+ A IF + C PD+ITY +++D L G+++ + M+ + P
Sbjct: 279 ALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSP 338
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D ++Y TL++ K+ L+ ++ EM G PD++TYT LI++ ++G+++ + +
Sbjct: 339 DRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDML 398
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M + I P+++ Y ++I L K ++D A+ + E M S
Sbjct: 399 DVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMES 438
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 113/235 (48%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+YNC++ +N + + ++ +D+ + ++ Y A + +L E+
Sbjct: 798 SYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEM 857
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ I N II A KS + KAL ++ + P TY ++D L + GR
Sbjct: 858 RSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRS 917
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ F M + G P+ + YN L+N K +D F++M + GI+PDL +YT L
Sbjct: 918 EQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTIL 977
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ TG I+E+++ F ++K + P Y +I+ L K ++D A+++F EM
Sbjct: 978 VECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEM 1032
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%)
Query: 84 CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI 143
C + L + ++ S+ + ++ A + K + + + +K + +P++ TY I
Sbjct: 216 CNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTI 275
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+ LGR R++D F M + G PD I+Y L++ L +LD + +M S
Sbjct: 276 CIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASS 335
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
PD +TY L+D FG+ G++E R +N+M+ P + Y LI+ L K G VD A
Sbjct: 336 HSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAF 395
Query: 264 TIFEEMNS 271
+ + M +
Sbjct: 396 DMLDVMTT 403
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 124/263 (47%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC AG + A L +R + P+ Y ++ + D++ + ++ V
Sbjct: 312 IDALCAAGKLDKAKELYVKMRASS-HSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT A + D + ++ + ++ N +I K+R++++AL
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++++ L KP +Y + +D G+ G ++ F +MK+ G++P + N L L
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R+ F ++ + G+ PD +TY L+ + + G I+++ +L ++M + P +
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
+ SLI+ L K G+VD A +F
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMF 573
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 14/190 (7%)
Query: 91 IEEVVQIASPESIIVVNRI----------IFAFAKSRQIEKALLIFDHI-KGLKCKPDLI 139
IEE + A I+V N + I K ++ A +FD K L P L
Sbjct: 741 IEEAISFAE---ILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLE 797
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+YN ++D L L F MK AG P+ +YN LL+ K +R++ + EM
Sbjct: 798 SYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEM 857
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G +P+ +T+ +I + ++ N+ ++L L+ ++ P+ Y LID L K G+
Sbjct: 858 RSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRS 917
Query: 260 DLAMTIFEEM 269
+ AM IFEEM
Sbjct: 918 EQAMKIFEEM 927
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 42/220 (19%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
IF E + P+ +I +I A + +++KA ++ ++ PD +TY ++D
Sbjct: 292 IFKEMDDEGCGPD-VITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKF 350
Query: 149 GRVG--------------------------------------RVNDMLNEFASMKEAGVV 170
G+VG R DML+ M G+
Sbjct: 351 GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLD---VMTTKGIF 407
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ +YNT++ L K RRLD L M G+KP +Y ID +G++G+ +++
Sbjct: 408 PNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDT 467
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
F MK++ I PSI + + L + G++ A IF +++
Sbjct: 468 FETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLH 507
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIV---LDILGRVGRVNDMLNEFASMKEAGVVP 171
+ R+IE + +FD ++ +L TY + L I G +GR L + M E G +
Sbjct: 143 EQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRK---MTEVGFIL 199
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ SYN L++ L + +Y R + E G+KP + TY+AL+ + GR G+ + + L
Sbjct: 200 NAYSYNGLIHLLLPGFCNEALKVYKRMISE-GMKPSMKTYSALMVALGRRGDTRKIMNLL 258
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+MK +RP+IY Y I L + ++D A IF+EM+
Sbjct: 259 EEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMD 297
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL------NNLRKIRRLDLCL 193
+YN ++ +L G N+ L + M G+ P +Y+ L+ + RKI L
Sbjct: 203 SYNGLIHLL-LPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNL---- 257
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
EM G++P++ TYT I + GR I+++ +F +M + P + Y LID L
Sbjct: 258 --LEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDAL 315
Query: 254 KKMGKVDLAMTIFEEMNSS 272
GK+D A ++ +M +S
Sbjct: 316 CAAGKLDKAKELYVKMRAS 334
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 121/303 (39%), Gaps = 45/303 (14%)
Query: 11 KAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
KAG + A +LL + K ++ + N+ L + + F LK+L ++ +
Sbjct: 527 KAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVV 586
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ Y + L + + P + I N ++ +K+ ++ AL +F
Sbjct: 587 T---YNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMF 643
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL-RK 185
+ + C PD++TYN ++ L R GR++ F MK+ + PD+++ TL+ + R
Sbjct: 644 CRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRH 702
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL----------------- 228
R D + + ++ ++ + + L++ IEE++
Sbjct: 703 GRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHV 762
Query: 229 ------------------RLFNDM-KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F+ K I P++ Y L+D L + A+ +FE+M
Sbjct: 763 MLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDM 822
Query: 270 NSS 272
S+
Sbjct: 823 KSA 825
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 133/266 (50%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKAGN A L +RD+ I LPN YN ++ + +D + ++ ++
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGI-LPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y F + + D L E++ +I+ N +++ AK+ + +A
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF +K + PD +TYN+++ +VG +++ + + M E G PD I N+L+N L
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D F M E +KP ++TY L+ G+ G I+E++ LF M Q+ P+
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +L D L K +V LA+ + +M
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKM 634
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I F K+ + + A +F + +PDL TY++++D L VGRV++ L+ F +
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES-GIKPDLLTYTALIDSFGRTGN 223
KE+G+ PD + YN ++N L K RL+ L+ F EM S GI PDL TY +LI + G G
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+EE+ +++N++++ + P+++ + +LI GK + A +++ M
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 7/268 (2%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
CK NVS A L + P YN ++ E + I+++ + L V S
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF--LQVKSTGCI 817
Query: 68 SDCYT-NFA-RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL-L 124
D T NF A+ + +L +E+ + I N +I K+ ++ AL L
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+D + P TY ++D L + GR+ + F M + G P+ YN L+N
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K D F+ M + G++PDL TY+ L+D G ++E L F ++K+ + P +
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +I+ L K +++ A+ +F EM +S
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 119/237 (50%), Gaps = 9/237 (3%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC-----VLVASAETNDIDLSFQILKDL 59
+I+ K+G+ +A+ + ++ K I PN C L + + F LKD+
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGI-APNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ +++ Y + + + + + + E+++ +IVVN +I K+ ++
Sbjct: 498 GLVPDSVT---YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +F +K +K KP ++TYN +L LG+ G++ + + F M + G P+ I++NTL
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ L K + L L +M + G PD+ TY +I + G ++E++ F+ MK+
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 13 GNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
G + A L+ +R+ L +YN ++ ++ + ++ + +++ S Y
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
++ D ++ ++E+ + ++ I ++ +I +A I +
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
C PD++TY +++D L +++ F MK PD ++Y TLL+ R LD
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
++ EM + G PD++T+T L+D+ + GN E+ + M+ Q I P+++ Y +LI
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 252 NLKKMGKVDLAMTIFEEMNS 271
L ++ ++D A+ +F M S
Sbjct: 407 GLLRVHRLDDALELFGNMES 426
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
F+ +R ++ + ++ PD++T+ I++D L + G + + M++ G++P+
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+YNTL+ L ++ RLD L F M G+KP TY ID +G++G+ +L F
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
MK + I P+I + + +L K G+ A IF
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I L K+ + A+ + + + + F P+ Y+ ++V + DID +LK++
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEG-FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +T R + ++ + ++ +I A +R+++
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F+ +K + KPD +TY +LD ++ + ++ M++ G VPD +++ L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K M + GI P+L TY LI R ++++L LF +M+ ++
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y Y ID K G A+ FE+M +
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 121/301 (40%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L +AG ++ A +L+ + D+ P+ Y ++ A +D + ++ + +
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCG-PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F D + F E+ + ++ ++ A K+ +A
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS-------------------- 163
D ++ P+L TYN ++ L RV R++D L F +
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 164 ---------------MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
MK G+ P+ ++ N L +L K R F + + G+ PD
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY ++ + + G I+E+++L ++M + P + V SLI+ L K +VD A +F
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 269 M 269
M
Sbjct: 564 M 564
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 4/212 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K+G + A +L + + D PN YN ++ + + D + + K ++
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGC-RPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ M + L + +E+ + ++ N II KS ++E+AL
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 124 LIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
++F+ +K + PDL TYN ++ LG G V + + ++ AG+ P+ ++N L+
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + ++ M G P+ TY L
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ A ++E+ +FD ++ K D TY + L G + M+E
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G V + SYN L++ L K R + +R M G +P L TY++L+ G+ +I+
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ L +M+ ++P++Y + I L + GK++ A I + M+
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 136/275 (49%), Gaps = 15/275 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+ G + A LL +R++ + P+ +Y+ ++ +T ID++ ++ +D
Sbjct: 116 NTLLSGLCRNGLMDEAYELLDEMRERGL-QPDKFSYDTLMAGLCKTGKIDMALKVFED-- 172
Query: 61 VSSRTLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
+ DC Y+ T + E++ + + ++ ++
Sbjct: 173 ----NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC 228
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K ++++A + + ++ C P++ITY+ ++D L + G+V D F M G+ P+ +
Sbjct: 229 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 288
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN+L++ +D L+ EM +G PD++TY LID +TG E+ RLF DM
Sbjct: 289 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 348
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
K + P + Y LI K+ ++D+A T+F++M
Sbjct: 349 KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 383
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK + A ++L+++ D+N PN Y+ ++ +T + + ++ K ++V
Sbjct: 224 MDGLCKGDRLQEAQQVLETMEDRNC-TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + F MT+ L+ +EE+ II N +I K+ + +A
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 342
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K C PD+ITY+ ++ ++ R++ F M + V+PD ++++TL+
Sbjct: 343 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+D EM S PD+ TYT+L+D F + G + E+ R+ M ++ +P++
Sbjct: 403 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 462
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LID + GK +A + EEM
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEM 488
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G + A +L + +R+ N P+ + ++ + + + + Q+L+ + +
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRE-NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
T + Y++ T +F +V+ P +++ N +I F + ++ A
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP-NVVTYNSLIHGFCMTNGVDSA 306
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
LL+ + + C PD+ITYN ++D L + GR + F MK PD I+Y+ L+
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 366
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K+ R+D+ F +M + + PD++T++ L++ + G ++++ RL +M P
Sbjct: 367 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 426
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y Y SL+D K+G++ A + + M
Sbjct: 427 VYTYTSLVDGFCKVGRMVEARRVLKRM 453
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKA + A ++ K +PN YN ++ + + + ++ +LK++ S
Sbjct: 14 IDGLCKANRLPEATTYFAKMKKKGT-VPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ F ++V+ +++ N ++ ++ +++A
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D ++ +PD +Y+ ++ L + G+++ L F PD ++Y+TL+ L
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RLD F +M E+ +PD++T+TAL+D + ++E+ ++ M+ + P++
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 252
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLID L K G+V A +F+ M
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRM 278
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 98/168 (58%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++I +I K+ ++ +A F +K P+ TYN++++ +V +V+
Sbjct: 5 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 64
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
MKE+G+ P+ ++Y+T+++ + ++D FR+M E+G P+L+TY L+ R
Sbjct: 65 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
G ++E+ L ++M+++ ++P + Y +L+ L K GK+D+A+ +FE+
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFED 172
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 131/280 (46%), Gaps = 19/280 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL- 59
N I CK V A LL+ +++ + PN Y+ V+ +D ++++ + +
Sbjct: 46 NVLINGFCKVHKVHRAYLLLKEMKESGL-APNVVTYSTVIHGFCRQTKVDTAYKLFRQMV 104
Query: 60 -------LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
LV+ TL S R +M D+ +LL +E+ + + ++
Sbjct: 105 ENGCMPNLVTYNTLLS----GLCRNGLM-DEAYELL---DEMRERGLQPDKFSYDTLMAG 156
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K+ +I+ AL +F+ C PD++ Y+ ++ L + GR+++ F M+E PD
Sbjct: 157 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPD 216
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+++ L++ L K RL M + P+++TY++LID +TG + ++ +F
Sbjct: 217 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 276
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M + I P++ Y SLI VD A+ + EEM ++
Sbjct: 277 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 316
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 81/138 (58%)
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
++C+ ++IT+ I++D L + R+ + FA MK+ G VP+ +YN L+N K+ ++
Sbjct: 1 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ +EM ESG+ P+++TY+ +I F R ++ + +LF M + P++ Y +L+
Sbjct: 61 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120
Query: 252 NLKKMGKVDLAMTIFEEM 269
L + G +D A + +EM
Sbjct: 121 GLCRNGLMDEAYELLDEM 138
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 20/281 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G A RL ++ K P+ Y+C++ + ID++ + D+L
Sbjct: 326 NTLIDGLCKTGRAPEANRLFGDMKAK-FCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384
Query: 61 VSSRTLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ ++ + + DD +LL EE+V + ++ F K
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLL---EEMVASDCSPDVYTYTSLVDGFCKVG 441
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A + + C+P+++TY ++D R G+ M GV P+ I+Y
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501
Query: 178 TLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+L+ +L + R++ R + K D+ Y ++D RTG + +L L
Sbjct: 502 SLIGGFCGTGDLEEARKM-----LERLERDENCKADMFAYRVMMDGLCRTGRMSAALELL 556
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+KQ P +Y +LI L + ++ AM + EEM S
Sbjct: 557 EAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+++T+T +ID + + E+ F MK++ P+ + Y LI+ K+ KV A +
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 267 EEMNSS 272
+EM S
Sbjct: 66 KEMKES 71
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
++ LCK+G+ S A N+F C + S E+ D D +L+ L S +T
Sbjct: 365 VKSLCKSGHASEA---------HNVF------CRMWNSHESGDRDAFISMLEVLCNSGKT 409
Query: 66 LSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
L + D I TD I + N + A K +Q+
Sbjct: 410 LEAIDLLHMMPEKGIDTD--------------------IGMYNMVFSALGKLKQVSFIST 449
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD +K PDL TYNI++ GRVG V+ F M+ + PD I+YNTL+N L
Sbjct: 450 LFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLG 509
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K LD I F+EM E G PD+ TY+ LI+ FG++ ++ + LF++M + P+I
Sbjct: 510 KNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIV 569
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L++ GK A +E M
Sbjct: 570 TYNILLDCLERRGKTAEAHKHYETM 594
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 137/315 (43%), Gaps = 52/315 (16%)
Query: 3 NGY-----IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSF 53
NGY ++ ++ VS + + + K +IF AYN +L A A+ +D ++
Sbjct: 185 NGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIF---AYNMLLDALAKAGMVDQAY 241
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
Q+ +D+ + YT R T + L F +E+V ++I N +I A
Sbjct: 242 QVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEAL 301
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDML------------ 158
K++ ++K + + + C+P+ TY++ LDIL G++ R+N++L
Sbjct: 302 GKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSIY 361
Query: 159 -----------------NEFASM---KEAGVVPDFISY-NTLLNNLRKIRRLDLCLIYFR 197
N F M E+G FIS L N+ + + +DL
Sbjct: 362 SYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDL----LH 417
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M E GI D+ Y + + G+ + LF+ MK I P ++ Y +I + ++G
Sbjct: 418 MMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVG 477
Query: 258 KVDLAMTIFEEMNSS 272
VD A +FEEM +S
Sbjct: 478 LVDKASGLFEEMEAS 492
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K+ G+ + +Y ++ + R + + EM G K D+ Y L+D+ + G +
Sbjct: 178 KKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMV 237
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ ++F DMKQ+ P Y Y LI K G+ ++ F+EM S
Sbjct: 238 DQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVS 284
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 133/264 (50%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG A L +++++ L AYN V+ ++ ++ ++Q+L+++
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE ++++ + +I F K +I++A L
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYL 710
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N +LD L + +++ L F SMK+ P++I+Y+ L++ L
Sbjct: 711 IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLC 770
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
KIR+ + ++++EM + G KP++ TYT +I + GNI E+ LF K++
Sbjct: 771 KIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSA 830
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
+Y ++I+ L + A +FEE
Sbjct: 831 IYNAIIEGLSNANRASDAYRLFEE 854
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 134/266 (50%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
+++LCKA + A + + L D P+A C L+ +D ++++ + +L ++
Sbjct: 451 VDRLCKAQRLDDACSIFEGL-DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ ++ YT+ R F E++++ ++++N + K+ +IEK
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F IK L PD +Y I++ L + G ++ F +MKE G V D +YNT+++
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +++ EM G +P ++TY ++ID + ++E+ LF + K + I ++
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLID K+G++D A I EE+
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEEL 715
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 128/266 (48%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I + G V AA+ LL ++ N P+ YN + + +D++++ ++ +
Sbjct: 242 IRVFAREGRVDAALSLLDEMKS-NSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANG 300
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L YT+ D + + E + Q N +I + + + E A
Sbjct: 301 LVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + C P +++YN +L LGR G+V++ L +F MK+ +P+ +YN +++ L
Sbjct: 361 SLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNLSTYNIMIDML 419
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +L+ L+ M ++G+ P+++T ++D + ++++ +F + + RP
Sbjct: 420 CKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDA 479
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI+ L + G+VD A ++E+M
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQM 505
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 126/260 (48%), Gaps = 2/260 (0%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
KAG V A + ++ + L + Y ++ + + ++ + ++ + + + + +
Sbjct: 282 KAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y + M +E + S++ N I+ + Q+++AL F+ +
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K P+L TYNI++D+L + G++ L +MK+AG+ P+ I+ N +++ L K +RL
Sbjct: 402 KK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
D F + +PD +TY +LI+ GR G ++E+ +L+ M P+ VY SL
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I N K G+ + I+ EM
Sbjct: 521 IRNFFKCGRKEDGHKIYNEM 540
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YTN A + D +L +++ ++ ++ + +I FA+ +++ AL + D +K
Sbjct: 203 YTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK 262
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+PD++ YN+ +D G+ G+V+ F MK G+V D ++Y +++ L K RL+
Sbjct: 263 SNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLN 322
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F M ++ P Y +I +G G E++ L +++ PS+ Y ++
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCIL 382
Query: 251 DNLKKMGKVDLAMTIFEEM 269
L + G+VD A+ FEEM
Sbjct: 383 SCLGRKGQVDEALKKFEEM 401
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKAG + A+ + +++D +F PN N ++ + +D + I + L +
Sbjct: 416 IDMLCKAGKLETALVVRDAMKDAGLF-PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + E+++ + +V +I F K + E
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I++ + L C PDL+ N +D + + G + F +K G +PD SY L++ L
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K F M E G D Y +ID F ++G + ++ +L +MK + P++
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y S+ID L K+ ++D A +FEE S
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 16/266 (6%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AG A LL+ R K +P+ +YNC+L +D + + +++ D
Sbjct: 353 AGKFEDAYSLLERQRRKGC-IPSVVSYNCILSCLGRKGQVDEALKKFEEM-------KKD 404
Query: 70 CYTNFARAFIMTDD-CTQLLIFIEEVVQIASPES-----IIVVNRIIFAFAKSRQIEKAL 123
N + IM D C + VV+ A ++ +I VN ++ K+++++ A
Sbjct: 405 AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + C+PD +TY +++ LGR GRV++ + M +A +P+ + Y +L+ N
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R + + EM G PDLL +D + G IE+ LF ++K P
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA 584
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI L K G A +F M
Sbjct: 585 RSYTILIHGLVKAGFAHEAYELFYTM 610
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSS 63
G + +L N R + L D+ AYN +L+ A T + QIL+++ ++
Sbjct: 102 GVLRRLKDVNNAVNYFRWAERLTDR-AHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 160
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S++ +FI + + FI+ + ++ + +I A + SR + L
Sbjct: 161 FGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ L ++ + ++ + R GRV+ L+ MK + PD + YN ++
Sbjct: 221 TLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCF 280
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D+ F EM +G+ D +TYT++I + + E++ LF M Q + P
Sbjct: 281 GKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCA 340
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFE 267
Y Y ++I GK + A ++ E
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLE 364
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 7/267 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK+G V+ A +LL+ ++ K P Y V+ A+ + +D ++ + ++
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKG-HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L+ Y++ F + + +EE++Q ++ N ++ A K+ +I
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL+ F +K LKC P+ ITY+I++ L ++ + N + M++ G P+ +Y T++
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + F + E G D Y A+I+ ++ RLF + + +
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC- 860
Query: 241 PSIYVYRS--LIDNLKKMGKVDLAMTI 265
SIY L+D+L K ++ A +
Sbjct: 861 -SIYTKTCVVLLDSLHKAECIEQAAIV 886
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F KS ++ KA + + +K +P ++TY V+D L ++ R+++ F K
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ + + Y++L++ K+ R+D + E+ + G+ P++ T+ L+D+ + I E
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L F MK + P+ Y LI L K+ K + A ++EM
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 130/264 (49%), Gaps = 2/264 (0%)
Query: 9 LCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCKA ++ AV L + + ++K + AYN +++ + ++ +L+ S
Sbjct: 315 LCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPS 374
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + L EE+ + A P ++ N +I K+ ++E AL++ D
Sbjct: 375 VVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRD 433
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K P++IT NI++D L + R++D + F + PD ++Y +L+ L +
Sbjct: 434 AMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHG 493
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R+D + +M ++ P+ + YT+LI +F + G E+ +++N+M + P + +
Sbjct: 494 RVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLN 553
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
+ +D + K G+++ +F+E+ +
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKN 577
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ +F KSR++ +A ++ LK +P Y ++ L + ML F M+E G
Sbjct: 171 IVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELG 230
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ + TL+ + R+D L EM + ++PD++ Y ID FG+ G ++ +
Sbjct: 231 YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAW 290
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ F++MK + Y S+I L K +++ A+ +FE M+ +
Sbjct: 291 KXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
YN +L ++ R + N + M AG P + ++ + K R+L + + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ +P YT LI + + + + L LF M++ +++++ +LI + G+V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 260 DLAMTIFEEMNSS 272
D A+++ +EM S+
Sbjct: 252 DAALSLLDEMKSN 264
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 143 IVLDILGRVGRVNDMLNEF---------ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
+V+ +L R+ VN+ +N F A +EA YN+LL + + R+ +
Sbjct: 99 LVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREA--------YNSLLMVMARTRKFNCLE 150
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
EM +G P T ++ SF ++ + E+ M++ + RP+ Y +LI L
Sbjct: 151 QILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGAL 210
Query: 254 KKMGKVDLAMTIFEEMN 270
D +T+F++M
Sbjct: 211 STSRDSDCMLTLFQQMQ 227
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 2/272 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G + L++ +R + +PN YNC++ + + I+ + ++ +
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + F E+ + + +I AF IE
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ +FD + C PD I Y ++ L + G+++ + MKEAG PD +S+N L+
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N + +LD +EM +GIKPD +TY LI F +TG+ + RL M ++ +
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLV 623
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y +LI G +D AM IF +M+S+
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIFRDMSST 655
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CKA + AA L + +K+ PN N ++ + I+ + + ++
Sbjct: 420 NCLIDGYCKASMIEAARELFDQM-NKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT RAF ++ + + +E+++ IV +I +++ +++
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + +K PD++++N++++ R ++++ M+ AG+ PD ++YNTL+
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ-QQI 239
++ K ++M + G+ P ++TY ALI ++ GN++E++++F DM ++
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ +Y LI++L + +VDLA+++ ++M
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDM 688
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 92 EEVVQIAS--------PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI 143
EE+V + S P SI + ++I +S + ++A + + L + + N
Sbjct: 252 EEIVGLVSKFAEHEVFPNSIWLT-QLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNA 310
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM--GE 201
+L LGR M A MKE + P+ +++ L+N+L K RR+D L F +M GE
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370
Query: 202 SG---IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMG 257
S ++PD++TY LID + G EE L L M+ Q + P+ Y LID K
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430
Query: 258 KVDLAMTIFEEMN 270
++ A +F++MN
Sbjct: 431 MIEAARELFDQMN 443
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/295 (17%), Positives = 113/295 (38%), Gaps = 39/295 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G ++ AV ++ K + NA Y ++ A N+I+ + ++ ++L
Sbjct: 455 NTLVDGMCKHGRINGAVEFFNEMQGKGL-KGNAVTYTALIRAFCNVNNIEKAMELFDEML 513
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + Y + + ++ + I+ N +I F + +++
Sbjct: 514 EAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLD 573
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY---- 176
+A + ++ KPD +TYN ++ + G + M + G+VP ++Y
Sbjct: 574 EAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALI 633
Query: 177 --------------------------------NTLLNNLRKIRRLDLCLIYFREMGESGI 204
N L+N+L + ++DL L +M G+
Sbjct: 634 HAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGV 693
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
KP+ T+ A+ + ++ L + M + P L + L +G+
Sbjct: 694 KPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGET 748
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ I ++ L R GR + + + + G V + S N LL L + R
Sbjct: 268 PNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTL 327
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ-----IRPSIYVYRSLI 250
EM E I+P+++T+ LI+ + ++E+L +F M + + P + Y +LI
Sbjct: 328 LAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLI 387
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
D L K+G+ + + + E M S
Sbjct: 388 DGLCKVGRQEEGLGLVERMRS 408
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 93/221 (42%), Gaps = 49/221 (22%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY--NIVLDILGRVGRVNDM 157
P S+ +I F +++ ++++ L+++ + C +T+ NI++D+L R GRV+D
Sbjct: 156 PLSVNAATLLIRCFGRAQMVDESFLVYNEL----CPSRRLTHIRNILIDVLFRKGRVDDA 211
Query: 158 LN----------EFASMKEAG---------------------------------VVPDFI 174
L+ EF G V P+ I
Sbjct: 212 LHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSI 271
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
L++ L + R D + + G + + AL+ + GR + L +M
Sbjct: 272 WLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEM 331
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
K+ I+P++ + LI++L K +VD A+ +FE+MN S+
Sbjct: 332 KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESN 372
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 133/264 (50%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG A L +++++ L AYN V+ ++ ++ ++Q+L+++
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE ++++ + +I F K +I++A L
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYL 710
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N +LD L + +++ L F SMK+ P++I+Y+ L++ L
Sbjct: 711 IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLC 770
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
KIR+ + ++++EM + G KP++ TYT +I + GNI E+ LF K++
Sbjct: 771 KIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSA 830
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
+Y ++I+ L + A +FEE
Sbjct: 831 IYNAIIEGLSNANRASDAYRLFEE 854
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 134/266 (50%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
+++LCKA + A + + L D P+A C L+ +D ++++ + +L ++
Sbjct: 451 VDRLCKAQRLDDACSIFEGL-DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ ++ YT+ R F E++++ ++++N + K+ +IEK
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F IK L PD +Y I++ L + G ++ F +MKE G V D +YNT+++
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +++ EM G +P ++TY ++ID + ++E+ LF + K + I ++
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLID K+G++D A I EE+
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEEL 715
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 128/266 (48%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I + G V AA+ LL ++ N P+ YN + + +D++++ ++ +
Sbjct: 242 IRVFAREGRVDAALSLLDEMKS-NSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANG 300
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L YT+ D + + E + Q N +I + + + E A
Sbjct: 301 LVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + C P +++YN +L LGR G+V++ L +F MK+ +P+ +YN +++ L
Sbjct: 361 SLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNLSTYNIMIDML 419
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +L+ L+ M ++G+ P+++T ++D + ++++ +F + + RP
Sbjct: 420 CKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDA 479
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI+ L + G+VD A ++E+M
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQM 505
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 126/260 (48%), Gaps = 2/260 (0%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
KAG V A + ++ + L + Y ++ + + ++ + ++ + + + + +
Sbjct: 282 KAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y + M +E + S++ N I+ + Q+++AL F+ +
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K P+L TYNI++D+L + G++ L +MK+AG+ P+ I+ N +++ L K +RL
Sbjct: 402 KK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
D F + +PD +TY +LI+ GR G ++E+ +L+ M P+ VY SL
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I N K G+ + I+ EM
Sbjct: 521 IRNFFKCGRKEDGHKIYNEM 540
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YTN A + D +L +++ ++ ++ + +I FA+ +++ AL + D +K
Sbjct: 203 YTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMK 262
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+PD++ YN+ +D G+ G+V+ F MK G+V D ++Y +++ L K RL+
Sbjct: 263 SNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLN 322
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F M ++ P Y +I +G G E++ L +++ PS+ Y ++
Sbjct: 323 EAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCIL 382
Query: 251 DNLKKMGKVDLAMTIFEEM 269
L + G+VD A+ FEEM
Sbjct: 383 SCLGRKGQVDEALKKFEEM 401
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKAG + A+ + +++D +F PN N ++ + +D + I + L +
Sbjct: 416 IDMLCKAGKLETALVVRDAMKDAGLF-PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + E+++ + +V +I F K + E
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I++ + L C PDL+ N +D + + G + F +K G +PD SY L++ L
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K F M E G D Y +ID F ++G + ++ +L +MK + P++
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y S+ID L K+ ++D A +FEE S
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSS 63
G + +L N R + L D+ AYN +L+ A T + QIL+++ ++
Sbjct: 102 GVLRRLKDVNNAVNYFRWAERLTDR-AHCREAYNSLLMVMARTRKFNCLEQILEEMSIAG 160
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S++ +FI + + FI+ + ++ + +I A + SR + L
Sbjct: 161 FGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ L ++ + ++ + R GRV+ L+ MK + PD + YN ++
Sbjct: 221 TLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCF 280
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D+ +F EM +G+ D +TYT++I + + E++ LF M Q + P
Sbjct: 281 GKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCA 340
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFE 267
Y Y ++I GK + A ++ E
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLE 364
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 16/266 (6%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AG A LL+ R K +P+ +YNC+L +D + + +++ D
Sbjct: 353 AGKFEDAYSLLERQRRKGC-IPSVVSYNCILSCLGRKGQVDEALKKFEEM-------KKD 404
Query: 70 CYTNFARAFIMTDD-CTQLLIFIEEVVQIASPES-----IIVVNRIIFAFAKSRQIEKAL 123
N + IM D C + VV+ A ++ +I VN ++ K+++++ A
Sbjct: 405 AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + C+PD +TY +++ LGR GRV++ + M +A +P+ + Y +L+ N
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R + + EM G PDLL +D + G IE+ LF ++K P
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA 584
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI L K G A +F M
Sbjct: 585 RSYTILIHGLVKAGFAHEAYELFYTM 610
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 7/267 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK+G V+ A +LL+ ++ K P Y V+ A+ + +D ++ + ++
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKG-HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L+ Y++ F + + +EE++Q ++ N ++ A K+ +I
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL+ F +K LKC P+ ITY+I++ L ++ + N + M++ G P+ +Y T++
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + F + E G D Y A+I+ ++ RLF + + +
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC- 860
Query: 241 PSIYVYRS--LIDNLKKMGKVDLAMTI 265
SIY L+D+L K ++ A +
Sbjct: 861 -SIYTKTCVVLLDSLHKAECIEQAAIV 886
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F KS ++ KA + + +K +P ++TY V+D L ++ R+++ F K
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ + + Y++L++ K+ R+D + E+ + G+ P++ T+ L+D+ + I E
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L F MK + P+ Y LI L K+ K + A ++EM
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 130/264 (49%), Gaps = 2/264 (0%)
Query: 9 LCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCKA ++ AV L + + ++K + AYN +++ + ++ +L+ S
Sbjct: 315 LCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPS 374
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + L EE+ + A P ++ N +I K+ ++E AL++ D
Sbjct: 375 VVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRD 433
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K P++IT NI++D L + R++D + F + PD ++Y +L+ L +
Sbjct: 434 AMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHG 493
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R+D + +M ++ P+ + YT+LI +F + G E+ +++N+M + P + +
Sbjct: 494 RVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLN 553
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
+ +D + K G+++ +F+E+ +
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKN 577
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ +F KSR++ +A ++ LK +P Y ++ L + ML F M+E G
Sbjct: 171 IVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELG 230
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ + TL+ + R+D L EM + ++PD++ Y ID FG+ G ++ +
Sbjct: 231 YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAW 290
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ F++MK + Y S+I L K +++ A+ +FE M+ +
Sbjct: 291 KFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
YN +L ++ R + N + M AG P + ++ + K R+L + + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ +P YT LI + + + + L LF M++ +++++ +LI + G+V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 260 DLAMTIFEEMNSS 272
D A+++ +EM S+
Sbjct: 252 DAALSLLDEMKSN 264
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 143 IVLDILGRVGRVNDMLNEF---------ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
+V+ +L R+ VN+ +N F A +EA YN+LL + + R+ +
Sbjct: 99 LVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREA--------YNSLLMVMARTRKFNCLE 150
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
EM +G P T ++ SF ++ + E+ M++ + RP+ Y +LI L
Sbjct: 151 QILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGAL 210
Query: 254 KKMGKVDLAMTIFEEMN 270
D +T+F++M
Sbjct: 211 STSRDSDCMLTLFQQMQ 227
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 76 RAFIMTDDCTQLLI-------------FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
R F T C LL F ++++ S ++ N +I K IE A
Sbjct: 93 RVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAA 152
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F+ +K PD +TYN ++D G+VGR++D + F MK PD I+YNTL+N
Sbjct: 153 SGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINC 212
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K +L L +FREM +SG+KP++++Y+ L+D+F + ++++L+ + DM++ + P+
Sbjct: 213 FCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPN 272
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ Y SL+D K+G + A + +EM+
Sbjct: 273 EHTYTSLVDAYCKIGNLSDAFRLADEMS 300
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 98/166 (59%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N +I + K +++ + F+ +K + C+PD+ITYN +++ + G++ L F
Sbjct: 169 VTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFRE 228
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK++G+ P+ +SY+TL++ K + L ++ +M G+ P+ TYT+L+D++ + GN
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGN 288
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ RL ++M Q + ++ Y +LID L + ++ A +F +M
Sbjct: 289 LSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKM 334
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 131/267 (49%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ +CK G++ AA L + ++ + + +P+ YN ++ + +D + +++ S
Sbjct: 140 IDCMCKEGDIEAASGLFEEMKFRGL-IPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + L F E+ Q +++ + ++ AF K +++AL
Sbjct: 199 CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAL 258
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ L P+ TY ++D ++G ++D M + GV + ++Y L++ L
Sbjct: 259 KFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGL 318
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R+ F +M +G+ P+L +YTALI F + N++ +L L ++MK + I+P +
Sbjct: 319 CDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDL 378
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+Y + I +L + K++ A + EM
Sbjct: 379 LLYGTFIWSLCGLEKIEAAKVVMNEMQ 405
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
E+AL F +K + P + N +L R+G+ + M F M AG P +YN
Sbjct: 79 FEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNI 138
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + K ++ F EM G+ PD +TY ++ID +G+ G +++++ F +MK
Sbjct: 139 MIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y +LI+ K GK+ + F EM S
Sbjct: 199 CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQS 232
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLK--CKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
NRI+ S+ K +FD + + C P ++ + +L + L F+
Sbjct: 29 ANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSK 88
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK V P S N LL+ ++ + D +F++M +G KP + TY +ID + G+
Sbjct: 89 MKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGD 148
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
IE + LF +MK + + P Y S+ID K+G++D + FEEM S
Sbjct: 149 IEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 124/308 (40%), Gaps = 45/308 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + + + ++ + PN +Y+ ++ A + + + + + D+
Sbjct: 207 NTLINCFCKFGKLPKGLEFFREMKQSGL-KPNVVSYSTLVDAFCKEDMMQQALKFYVDMR 265
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT+ A+ + + +E+ Q+ +++ +I +I+
Sbjct: 266 RLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIK 325
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + P+L +Y ++ + ++ L MK G+ PD + Y T +
Sbjct: 326 EAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI 385
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN----------------- 223
+L + +++ + EM E GIK + YT L+D++ ++ N
Sbjct: 386 WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIE 445
Query: 224 ----------------------IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
I+ R+ ND ++ + +Y ++ID L K +V+
Sbjct: 446 VTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFG---LQANAAIYTAMIDGLCKEDQVEA 502
Query: 262 AMTIFEEM 269
A T+FE+M
Sbjct: 503 ATTLFEQM 510
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/268 (17%), Positives = 108/268 (40%), Gaps = 37/268 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI-FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ CK GN+S A RL + + + Y ++ + I + ++ ++ +
Sbjct: 280 VDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGV 339
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT F+ + + L ++E+ +++ I++ +IE A +
Sbjct: 340 IPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKV 399
Query: 125 IFDHI--KGLKCKP---------------------------------DLITYNIVLDILG 149
+ + + KG+K +T+ +++D L
Sbjct: 400 VMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLC 459
Query: 150 RVGRVNDMLNEFASMK-EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ V+ ++ F + + G+ + Y +++ L K +++ F +M + G+ PD
Sbjct: 460 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDR 519
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQ 236
YT+LID + GN+ ++L L + M +
Sbjct: 520 TAYTSLIDGKLKQGNVVQALALRDKMAE 547
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 134/264 (50%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + L +++++ L +AYN V+ ++ ++ ++Q+L+++ V
Sbjct: 586 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 645
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE +++V + +I F K +I++A L
Sbjct: 646 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYL 705
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N +LD L + +N+ L F SMK+ P+ I+Y+ L+N L
Sbjct: 706 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLC 765
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++R+ + ++++EM + G+KP+ +TYT +I + GNI E+ LF+ K P
Sbjct: 766 RVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSA 825
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
Y ++I+ L K A +FEE
Sbjct: 826 SYNAMIEGLSSANKAMDAYALFEE 849
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I++LCKA + A + + + DK + PNA ++ ++ + +D ++ + + +L
Sbjct: 446 IDRLCKAQKLEEACSIFEGMDDK-VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 504
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT+ R+F +E+V + ++N + K+ + EK
Sbjct: 505 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGR 564
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F I PD +Y+I++ L + G N+ F +MKE G V D +YN +++
Sbjct: 565 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 624
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +++ EM G P ++TY ++ID + ++E+ LF + K I+ ++
Sbjct: 625 CKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 684
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLID K+G++D A I EE+
Sbjct: 685 VVYSSLIDGFGKVGRIDEAYLIMEEL 710
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 128/261 (49%), Gaps = 4/261 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
KAG V + + ++ + +P+ Y ++ + N +D + ++ + L + + +
Sbjct: 277 KAGKVDMSWKFFHEMKSHGL-MPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCA 335
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + + +E S S+I N I+ K R++E+AL IF+
Sbjct: 336 YAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEE 395
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+K P++ TYNI++D+L R G++N L M+ AG+ P+ ++ N +++ L K ++
Sbjct: 396 MK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQK 454
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L+ F M + P+ +T+++LID G+ G ++++ L+ M P VY S
Sbjct: 455 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTS 514
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
LI + K G+ + I++EM
Sbjct: 515 LIRSFFKCGRKEDGHKIYKEM 535
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 35/279 (12%)
Query: 26 RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD---------------- 69
+ + + P AYN +L+ A + D +IL+++ +S SS+
Sbjct: 118 QTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLR 177
Query: 70 -------------------CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
YT A + +LI ++ ++ ++ + +I
Sbjct: 178 EAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLI 237
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
FA+ +++ AL + D +K D++ YN+ +D G+ G+V+ F MK G++
Sbjct: 238 RVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLM 297
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++Y +++ L K RLD + F ++ ++ P Y +I +G G +E+ L
Sbjct: 298 PDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGL 357
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
K + PS+ Y ++ L K +V+ A+ IFEEM
Sbjct: 358 LERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 125/256 (48%), Gaps = 5/256 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK+G V+ A +LL+ ++ K P Y V+ A+ + +D ++ + ++
Sbjct: 618 NAVIDGFCKSGKVNKAYQLLEEMKVKG-HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 676
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L+ Y++ F + + +EE++Q ++ N ++ A K+ +I
Sbjct: 677 SNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIN 736
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL+ F +K LKC P+ ITY+I+++ L RV + N + M++ G+ P+ I+Y T++
Sbjct: 737 EALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMI 796
Query: 181 NNLRKIRR-LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L K L+ ++ R GI PD +Y A+I+ ++ LF + + +
Sbjct: 797 SGLAKAGNILEASGLFSRFKANGGI-PDSASYNAMIEGLSSANKAMDAYALFEETRLKGC 855
Query: 240 RPSIYVYRSLIDNLKK 255
L+D L K
Sbjct: 856 NIHTKTCVVLLDALHK 871
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F KS ++ KA + + +K P ++TY V+D L ++ R+++ F K
Sbjct: 618 NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 677
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ + + Y++L++ K+ R+D + E+ + G+ P++ T+ L+D+ + I E
Sbjct: 678 NGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINE 737
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L F MK + P+ Y LI+ L ++ K + A ++EM
Sbjct: 738 ALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ 781
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 43/269 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I + G V AA+ LL ++ D +I L YN + + +D+S++ ++
Sbjct: 237 IRVFAREGRVDAALSLLDEMKSNSLDADIVL---YNVCIDCFGKAGKVDMSWKFFHEMKS 293
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+M DD T +I K+ ++++
Sbjct: 294 HG---------------LMPDDVT--------------------YTSMIGVLCKANRLDE 318
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ +F+ ++ + P YN ++ G G+ ++ K G +P I+YN +L
Sbjct: 319 AVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILT 378
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K RR++ L F EM + P++ TY LID R G + +L + +DM++ + P
Sbjct: 379 CLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFP 437
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ +ID L K K++ A +IFE M+
Sbjct: 438 NVLTVNIMIDRLCKAQKLEEACSIFEGMD 466
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
YN +L ++ R + + M +G P L+ N K R+L + M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ +P YT LI + + L LF+ M++ +++++ +LI + G+V
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246
Query: 260 DLAMTIFEEMNSSLSD 275
D A+++ +EM S+ D
Sbjct: 247 DAALSLLDEMKSNSLD 262
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 134/264 (50%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + L +++++ L +AYN V+ ++ ++ ++Q+L+++ V
Sbjct: 341 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 400
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE +++V + +I F K +I++A L
Sbjct: 401 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYL 460
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N +LD L + +N+ L F SMK+ P+ I+Y+ L+N L
Sbjct: 461 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLC 520
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++R+ + ++++EM + G+KP+ +TYT +I + GNI E+ LF+ K P
Sbjct: 521 RVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSA 580
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
Y ++I+ L K A +FEE
Sbjct: 581 SYNAMIEGLSSANKAMDAYALFEE 604
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I++LCKA + A + + + DK + PNA ++ ++ + +D ++ + + +L
Sbjct: 201 IDRLCKAQKLEEACSIFEGMDDK-VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 259
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT+ R+F +E+V + ++N + K+ + EK
Sbjct: 260 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGR 319
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F I PD +Y+I++ L + G N+ F +MKE G V D +YN +++
Sbjct: 320 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 379
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +++ EM G P ++TY ++ID + ++E+ LF + K I+ ++
Sbjct: 380 CKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 439
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLID K+G++D A I EE+
Sbjct: 440 VVYSSLIDGFGKVGRIDEAYLIMEEL 465
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 37/262 (14%)
Query: 9 LCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCKA + AV L + L +++ + AYN +++ D ++ +L
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLL----------- 113
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
E S S+I N I+ K R++E+AL IF+
Sbjct: 114 ------------------------ERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFE 149
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K P++ TYNI++D+L R G++N L M+ AG+ P+ ++ N +++ L K +
Sbjct: 150 EMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ 208
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+L+ F M + P+ +T+++LID G+ G ++++ L+ M P VY
Sbjct: 209 KLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYT 268
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
SLI + K G+ + I++EM
Sbjct: 269 SLIRSFFKCGRKEDGHKIYKEM 290
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 125/256 (48%), Gaps = 5/256 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK+G V+ A +LL+ ++ K P Y V+ A+ + +D ++ + ++
Sbjct: 373 NAVIDGFCKSGKVNKAYQLLEEMKVKG-HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 431
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L+ Y++ F + + +EE++Q ++ N ++ A K+ +I
Sbjct: 432 SNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIN 491
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL+ F +K LKC P+ ITY+I+++ L RV + N + M++ G+ P+ I+Y T++
Sbjct: 492 EALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMI 551
Query: 181 NNLRKIRR-LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L K L+ ++ R GI PD +Y A+I+ ++ LF + + +
Sbjct: 552 SGLAKAGNILEASGLFSRFKANGGI-PDSASYNAMIEGLSSANKAMDAYALFEETRLKGC 610
Query: 240 RPSIYVYRSLIDNLKK 255
L+D L K
Sbjct: 611 NIHTKTCVVLLDALHK 626
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 130/301 (43%), Gaps = 51/301 (16%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AG A LL+ + K +P+ AYNC+L + ++ + +I ++ + D
Sbjct: 103 AGKFDEAYGLLERQKAKGS-IPSVIAYNCILTCLGKKRRVEEALRIFEE-------MKRD 154
Query: 70 CYTNFARAFIMTD------DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
N I+ D L +++ + +++ VN +I K++++E+A
Sbjct: 155 AVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 214
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + C P+ +T++ ++D LG+ GRV+D + + M + G VP I Y +L+ +
Sbjct: 215 SIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSF 274
Query: 184 RKIRR-----------------LDLCLI------------------YFREMGESGIKPDL 208
K R DL LI FRE+ G PD
Sbjct: 275 FKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDA 334
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+Y+ LI + G E+ LF MK+Q + Y ++ID K GKV+ A + EE
Sbjct: 335 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 394
Query: 269 M 269
M
Sbjct: 395 M 395
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F KS ++ KA + + +K P ++TY V+D L ++ R+++ F K
Sbjct: 373 NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 432
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ + + Y++L++ K+ R+D + E+ + G+ P++ T+ L+D+ + I E
Sbjct: 433 NGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINE 492
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L F MK + P+ Y LI+ L ++ K + A ++EM
Sbjct: 493 ALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ 536
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
+ K+ ++++A+ +F+ ++ + P YN ++ G G+ ++ K G +
Sbjct: 63 WVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 122
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P I+YN +L L K RR++ L F EM + P++ TY LID R G + +L +
Sbjct: 123 PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEI 181
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+DM++ + P++ +ID L K K++ A +IFE M+
Sbjct: 182 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD 221
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG----------RVGRVNDMLNEFASM 164
KSR++ +A I ++ K +P Y I++ +G + R+++ + F +
Sbjct: 22 KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQL 81
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ VP +YNT++ + D G P ++ Y ++ G+ +
Sbjct: 82 EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 141
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
EE+LR+F +MK+ + P++ Y LID L + GK++ A+ I ++M +
Sbjct: 142 EEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERA 188
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 135/275 (49%), Gaps = 15/275 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+ G + A LL +R++ + P+ +Y+ ++ +T ID++ ++ +D
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGL-QPDKFSYDTLMAGLCKTGKIDMALKVFED-- 291
Query: 61 VSSRTLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
+ DC Y+ + E++ + + ++ ++
Sbjct: 292 ----NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC 347
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K ++++A + + ++ C P++ITY+ ++D L + G+V D F M G+ P+ +
Sbjct: 348 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 407
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN+L++ +D L+ EM +G PD++TY LID +TG E+ RLF DM
Sbjct: 408 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 467
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
K + P + Y LI K+ ++D+A T+F++M
Sbjct: 468 KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 17 AAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNF 74
AA+R + F N YN + A ID + ILK+ T + Y
Sbjct: 6 AALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVV 65
Query: 75 ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKC 134
+ + D + +EE+ + + N +I A K+R KAL D+ + ++C
Sbjct: 66 IQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKAL---DYFRSMEC 122
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ ++IT+ I++D L + R+ + FA MK+ G VP+ +YN L+N K+ ++ +
Sbjct: 123 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 182
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+EM ESG+ P+++TY+ +I F R ++ + +LF M + P++ Y +L+ L
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242
Query: 255 KMGKVDLAMTIFEEM 269
+ G +D A + +EM
Sbjct: 243 RNGLMDEAYELLDEM 257
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK + A ++L+++ D+N PN Y+ ++ +T + + ++ K ++V
Sbjct: 343 MDGLCKGDRLQEAQQVLETMEDRNC-TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 401
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + F MT+ L+ +EE+ II N +I K+ + +A
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 461
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K C PD+ITY+ ++ ++ R++ F M + V+PD ++++TL+
Sbjct: 462 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 521
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+D EM S PD+ TYT+L+D F + G + E+ R+ M ++ +P++
Sbjct: 522 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 581
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LID + GK +A + EEM
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEM 607
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 133/267 (49%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCKAG + A +L + +R+ N P+ + ++ + + + + Q+L+ + +
Sbjct: 308 IAGLCKAGRLDEACKLFEKMRE-NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
T + Y++ T +F +V+ P +++ N +I F + ++ A
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP-NVVTYNSLIHGFCMTNGVDSA 425
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
LL+ + + C PD+ITYN ++D L + GR + F MK PD I+Y+ L+
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K+ R+D+ F +M + + PD++T++ L++ + G ++++ RL +M P
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 545
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y Y SL+D K+G++ A + + M
Sbjct: 546 VYTYTSLVDGFCKVGRMVEARRVLKRM 572
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 20/281 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK+G++ A LL+ +R+ +P+A YN V+ A + + + +
Sbjct: 66 IQGLCKSGDLDKACELLEEMRESGP-VPDAAIYNFVIHALCKARNTAKALDYFR------ 118
Query: 64 RTLSSDCYTNFARAFIMTDD-C-----TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S +C N IM D C + + ++ + + + N +I F K
Sbjct: 119 ---SMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVH 175
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A L+ +K P+++TY+ V+ R +V+ F M E G +P+ ++YN
Sbjct: 176 KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 235
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TLL+ L + +D EM E G++PD +Y L+ +TG I+ +L++F D
Sbjct: 236 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
P + Y +LI L K G++D A +FE+M NS D+
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDV 336
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKA + A ++ K +PN YN ++ + + + ++ +LK++ S
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGT-VPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ F ++V+ +++ N ++ ++ +++A
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D ++ +PD +Y+ ++ L + G+++ L F PD ++Y+TL+ L
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RLD F +M E+ +PD++T+TAL+D + ++E+ ++ M+ + P++
Sbjct: 312 CKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 371
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLID L K G+V A +F+ M
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRM 397
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 131/280 (46%), Gaps = 19/280 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL- 59
N I CK V A LL+ +++ + PN Y+ V+ +D ++++ + +
Sbjct: 165 NVLINGFCKVHKVHRAYLLLKEMKESGL-APNVVTYSTVIHGFCRQTKVDTAYKLFRQMV 223
Query: 60 -------LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
LV+ TL S R +M D+ +LL +E+ + + ++
Sbjct: 224 ENGCMPNLVTYNTLLS----GLCRNGLM-DEAYELL---DEMRERGLQPDKFSYDTLMAG 275
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K+ +I+ AL +F+ C PD++ Y+ ++ L + GR+++ F M+E PD
Sbjct: 276 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPD 335
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+++ L++ L K RL M + P+++TY++LID +TG + ++ +F
Sbjct: 336 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 395
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M + I P++ Y SLI VD A+ + EEM ++
Sbjct: 396 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 20/281 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G A RL ++ K P+ Y+C++ + ID++ + D+L
Sbjct: 445 NTLIDGLCKTGRAPEANRLFGDMKAK-FCNPDVITYSCLIGGFCKLERIDMARTLFDDML 503
Query: 61 VSSRTLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ ++ + + DD +LL EE+V + ++ F K
Sbjct: 504 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLL---EEMVASDCSPDVYTYTSLVDGFCKVG 560
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A + + C+P+++TY ++D R G+ M GV P+ I+Y
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620
Query: 178 TLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+L+ +L + R+ I R + K D+ Y ++D RTG + +L L
Sbjct: 621 SLIGGFCGTGDLEEARK-----ILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELL 675
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+KQ P +Y +LI L + ++ AM + EEM S
Sbjct: 676 EAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+ G ++ TY L ++ R I+E+ + + I P+++ Y +I L K G +D
Sbjct: 17 QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76
Query: 261 LAMTIFEEMNSS 272
A + EEM S
Sbjct: 77 KACELLEEMRES 88
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 137/269 (50%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N +++ L K+G + L + + + PN +N V+ ++N +D + + DL+
Sbjct: 827 NLFLDALGKSGKIKELFDLYEEMLFRGC-KPNTITHNIVIFGLVKSNSLDKAIDLYYDLM 885
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + + F EE++ + + N ++ F K +E
Sbjct: 886 SGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVE 945
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + +PDL +Y+I++D L VG+V+D L+ F +K +G+ PD + YN ++
Sbjct: 946 TACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMI 1005
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L + +R++ L F EM GI PDL TY ALI + G G +EE+ +++ +++ + +
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+++ Y +LI G D A ++++M
Sbjct: 1066 PNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 6/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G V A L ++ + + PN YN ++ N +D + ++ +
Sbjct: 374 IDALCKVGKVDEAFGTLDVMKKQGV-APNLHTYNTLICGLLRLNRLDEALELFNSMESLG 432
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y F + + + + + E++ +I+ N +++ A+ ++E+A
Sbjct: 433 LETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAK 492
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F+ +K PD ITYNI++ G+ GRV+D + + M+E G P+ + N+L++ L
Sbjct: 493 EFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTL 552
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D F+ M E + P ++TY L+ G+ G ++E+ LF M P+
Sbjct: 553 YKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNT 612
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF---EEMN 270
+ +L+D L K G+VDLA+ + EMN
Sbjct: 613 ISFNTLLDCLCKNGEVDLALKMLFRMTEMN 642
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 100/189 (52%)
Query: 83 DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
D ++ ++E+ + +I I ++ +I++A I + C PD++TY
Sbjct: 242 DIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYT 301
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+++D L G++N+ F MK + PD ++Y TLL+ LD ++ EM
Sbjct: 302 VLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD 361
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G PD++T+T LID+ + G ++E+ + MK+Q + P+++ Y +LI L ++ ++D A
Sbjct: 362 GYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEA 421
Query: 263 MTIFEEMNS 271
+ +F M S
Sbjct: 422 LELFNSMES 430
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 4/264 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G A + L P+ AYN ++ + ++++ + + + T
Sbjct: 762 LCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTP 821
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL-LI 125
Y F A + +L EE++ + I N +IF KS ++KA+ L
Sbjct: 822 DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLY 881
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+D + G P TY ++D L ++GR+ + F M + G +P+ YN L+N K
Sbjct: 882 YDLMSG-DFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGK 940
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
++ FR M + GI+PDL +Y+ ++D G ++++L F ++K + P +
Sbjct: 941 QGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVC 1000
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I+ L + +V+ A+++F+EM
Sbjct: 1001 YNLMINGLGRSQRVEEALSLFDEM 1024
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 18/282 (6%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS---FQILKDL 59
+I+ K+G A++ + ++ I +PN A N L + AE ++ + F LK
Sbjct: 443 FIDYYGKSGESGKAIKTFEKMKTNGI-VPNIVACNASLYSLAEQGRLEEAKEFFNGLKKC 501
Query: 60 LVSSRTLSSD----CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
++ ++ + CY R DD +LL +EE PE ++++N +I K
Sbjct: 502 GLAPDAITYNILMRCYGKAGR----VDDAIKLLSEMEE--NGCDPE-VVIINSLIDTLYK 554
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ ++++A +F +K +K P ++TYN +L LG+ GRV + F M P+ IS
Sbjct: 555 ADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTIS 614
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+NTLL+ L K +DL L M E PD+LTY +I + + + LF+ MK
Sbjct: 615 FNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK 674
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ I P +L+ + K G+++ A + +E + D A
Sbjct: 675 -KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHA 715
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%)
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
L+ Y + + C + L +V S+ + ++ A K R IE + +
Sbjct: 190 LNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGL 249
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ L +P++ T+ I + ILGR G++++ M +AG PD ++Y L++ L
Sbjct: 250 LQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCN 309
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+L+ F +M S KPD +TY L+D F G+++ +++M+ P +
Sbjct: 310 AGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVT 369
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+ LID L K+GKVD A + M
Sbjct: 370 FTILIDALCKVGKVDEAFGTLDVM 393
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N + A KS +I++ +++ + CKP+ IT+NIV+ L + ++ ++ +
Sbjct: 823 VFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYY 882
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ P +Y L++ L K+ RL+ +F EM + G P+ Y L++ FG+ G
Sbjct: 883 DLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQG 942
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++E + LF M ++ IRP + Y ++D L +GKVD A+ FEE+ S
Sbjct: 943 DVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 74/131 (56%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD++T+ I++D L +VG+V++ MK+ GV P+ +YNTL+ L ++ RLD L
Sbjct: 365 PDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALEL 424
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F M G++ TY ID +G++G ++++ F MK I P+I + + +L +
Sbjct: 425 FNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAE 484
Query: 256 MGKVDLAMTIF 266
G+++ A F
Sbjct: 485 QGRLEEAKEFF 495
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 11/275 (4%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLV 61
G I L K+G A+++ + + + I P+ Y+ ++VA + DI+ +L+++
Sbjct: 197 GLIHLLLKSGFCREALKVYRRMVSEGI-KPSLKTYSALMVALGKRRDIETVMGLLQEM-- 253
Query: 62 SSRTLSSDCYTNFA---RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S L + YT F R + ++ + ++ +I A + +
Sbjct: 254 ESLGLRPNIYT-FTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGK 312
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFISYN 177
+ A +F +K KPD +TY +LD G + D + EF S EA G +PD +++
Sbjct: 313 LNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL-DAIKEFWSEMEADGYLPDVVTFT 371
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L K+ ++D M + G+ P+L TY LI R ++E+L LFN M+
Sbjct: 372 ILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESL 431
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + Y Y ID K G+ A+ FE+M ++
Sbjct: 432 GLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTN 466
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 58 DLLVSSR----TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASP-ESIIVVNRIIFA 112
D++V R T+SS+ R D Q F V ++ + N ++
Sbjct: 75 DVVVVKRKPESTMSSE---EVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEM 131
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
R++E +++F+ ++ K + TY + +L G + + M++ G V +
Sbjct: 132 LRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLN 191
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
SY L++ L K L +R M GIKP L TY+AL+ + G+ +IE + L
Sbjct: 192 GYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQ 251
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M+ +RP+IY + I L + GK+D A I + M+ +
Sbjct: 252 EMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDA 291
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 92/211 (43%), Gaps = 3/211 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K G + A + + + D +PN YN ++ + D++ + ++ + ++
Sbjct: 900 IDGLLKLGRLEEAKQFFEEMLDYGC-MPNCPLYNILMNGFGKQGDVETACELFRRMVKEG 958
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ M L + EE+ ++ N +I +S+++E+AL
Sbjct: 959 IRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEAL 1018
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD ++ PDL TYN ++ LG G V + + ++ G+ P+ +YN L+
Sbjct: 1019 SLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGH 1078
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D +++M G +P+ T+ L
Sbjct: 1079 SMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+Y ++ +L + G + L + M G+ P +Y+ L+ L K R ++ + +EM
Sbjct: 194 SYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEM 253
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G++P++ T+T I GR G I+E+ + M P + Y LID L GK+
Sbjct: 254 ESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKL 313
Query: 260 DLAMTIFEEMNSS 272
+ A +F +M +S
Sbjct: 314 NNAKELFLKMKAS 326
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 11 KAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
KAG V A++LL + D + + N+ L + ++ FQ +K++ ++ +
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVV 578
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ Y + + ++ P + I N ++ K+ +++ AL +
Sbjct: 579 T---YNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML 635
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ + C PD++TYN V+ L + RVN F MK+ + PD+++ TLL + K
Sbjct: 636 FRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKD 694
Query: 187 RRLDLCLIYFRE-----------------MG----ESGIKPDLLTYTALI-------DS- 217
R++ +E MG E+ I +L +L+ DS
Sbjct: 695 GRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSV 754
Query: 218 -------FGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G ++ +F + K I PS+ Y SLID L K ++A +F +M
Sbjct: 755 LIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKM 814
Query: 270 NSS 272
++
Sbjct: 815 KNA 817
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ +AG+V AA+ L+ S+ +K + P +N VL + D + ++ + +
Sbjct: 196 NVLIDARFRAGDVDAAIALVDSMANKGL-KPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD 254
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + F + + + F +E+ Q ++ + +I F+ +++
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +KGL PD + Y +V+ R G +++ L M G +PD ++YNTLL
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K RL EM E G+ PDL T+T LI + R GN E++L+LF+ + Q++R
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLR 434
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y SLID + + G + A ++++M++
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHA 465
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 129/271 (47%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK A + +++ D+ P+ ++N ++ +++ + + K++
Sbjct: 231 NSVLKGLCKHRRFDKAKEVFRAM-DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQ 289
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T ++ F ++ E+ + ++ +I F ++ +
Sbjct: 290 QRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMS 349
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + D + GL C PD++TYN +L+ L + R+ D MKE GV PD ++ TL+
Sbjct: 350 EALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLI 409
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + L F + ++PD++ Y +LID R G++ ++ L++DM ++I
Sbjct: 410 HGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIF 469
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y LID+ + G+V+ A +EM S
Sbjct: 470 PNHVTYSILIDSHCEKGQVEEAFGFLDEMVS 500
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+N ++ ++ KS + +KA + ++ PD++T+N+++D R G V+ + SM
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
G+ P +++N++L L K RR D FR M + + PD+ ++ LI F R G +
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
EE+++ + +M+Q+ + P + + LI GK+D A EM
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKG 325
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 111/238 (46%), Gaps = 3/238 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C+ GN A++L +L + + P+ AYN ++ D+ + ++ D+
Sbjct: 409 IHGYCRDGNFEKALQLFDTLLHQRL-RPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ + + F++E+V + +I+ N II + +S ++K
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQ 527
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ PDLIT+N ++ + ++ N F M++ V PD ++YN ++N
Sbjct: 528 QFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGF 587
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ ++ F++MG SGI+PD TY +LI+ GN +E+ +L ++M + P
Sbjct: 588 SEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 129/272 (47%), Gaps = 9/272 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL---PN--AYNCVLVASAETNDIDLSFQILKDLL 60
I C+AG++S A+R+ RD+ + L P+ YN +L + + + + ++L ++
Sbjct: 339 IGGFCRAGSMSEALRV----RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T +T + + + L + ++ ++ N +I + +
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA ++D + + P+ +TY+I++D G+V + M G +P+ ++YN+++
Sbjct: 455 KANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII 514
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + ++M + I PDL+T+ LI + + N+ + +FN M+++ ++
Sbjct: 515 KGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQ 574
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y +I+ + G ++ A +F++M +S
Sbjct: 575 PDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS 606
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/305 (18%), Positives = 129/305 (42%), Gaps = 38/305 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL---- 59
I C+ G V A++ + ++ + + P+ +++C++ + +D + L+++
Sbjct: 269 IGGFCRVGEVEEAMKFYKEMQQRGV-TPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327
Query: 60 LVSSRTLSSDCYTNFARAFIMTDD--------------------------CTQLLIF--- 90
LV + + F RA M++ C Q +
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387
Query: 91 --IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ E+ + + +I + + EKAL +FD + + +PD++ YN ++D +
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G + + M + P+ ++Y+ L+++ + +++ + EM G P++
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNI 507
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY ++I + R+GN+++ + M Q I P + + +LI K + A +F
Sbjct: 508 MTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNI 567
Query: 269 MNSSL 273
M +
Sbjct: 568 MEKEM 572
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 136/272 (50%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG ++ ++ N+ A + Q + + + P+ +Y+ ++ A+ +D S +IL +++
Sbjct: 49 NGVMQGFARSNNMEKAREVYQHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMV 107
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +T S Y++ RA +E+++ ++ +I ++ +++
Sbjct: 108 MRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVK 167
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A F + C+P++ YN++L L G++ FA MK PD ++YNTLL
Sbjct: 168 DASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + K RR++ F M +G P+++T++ LI RTG +E++L +F M + +
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 287
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ Y Y +LI L + KV A +FE+M +
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFEKMTQA 319
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 102/201 (50%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y++ ++ + + +EE++ + N ++ FA+S +EKA ++ H+
Sbjct: 13 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
KPD ++Y+I++ L ++G++++ L + M G P +Y++L+ L K RR+D
Sbjct: 73 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F EM G PD L + LI + G ++++ F M + +P++ VY L+
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
L G+++ A T+F EM S
Sbjct: 193 HGLCSSGQLEQANTLFAEMKS 213
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 130/271 (47%), Gaps = 10/271 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CKA V +L +++R ++PN ++ ++ T +++ + ++ +L
Sbjct: 224 NTLLDAVCKARRVEEGCKLFEAMRAAG-YVPNVITFSTLIHGLCRTGELEKALEVFGSML 282
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT + Q E++ Q P + N +I + K ++
Sbjct: 283 EAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 342
Query: 121 KALLIFDHIKG-LKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+A ++ + G +P ++T+N ++D LG++GR N+++ A M G+ D +Y
Sbjct: 343 EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELV---AEMGTKGLAADSCTY 399
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L+ L + +LD L +++M E D ++ + + +TGNI+++ +F ++
Sbjct: 400 RILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRK 459
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
P+ +R L ++L K+G+V+ A + E
Sbjct: 460 SGAVPNPETFRILSESLIKLGRVEDAQKLME 490
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC+AG V A + + K+ PN YN +L + ++ + + ++ S +
Sbjct: 160 LCQAGKVKDASERFKQM-PKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP 218
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
Y A + E + ++I + +I ++ ++EKAL +F
Sbjct: 219 DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 278
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ CKP+ TY ++ L R +V F M +A + PD ++YN+L+ K
Sbjct: 279 GSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 338
Query: 187 RRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+D +REM G +G++P ++T+ LID F + G + + L +M + +
Sbjct: 339 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCT 398
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
YR LI L + K+D A+ ++++M
Sbjct: 399 YRILIAGLSRATKLDEALEVYKQM 422
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ + II + K + E++ + + + C PD+ +N V+ R + +
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E+G PD +SY+ L++ L KI +LD L EM G P + Y++L+ + +
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + LF++M + P ++ LI L + GKV A F++M
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQM 176
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 131/270 (48%), Gaps = 34/270 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ LCKA VS AV LL+S++ A + D+ +++ IL D L
Sbjct: 198 IDGLCKANRVSQAVELLESMK---------------ARGCSPDV-ITYTILVDGLCKE-- 239
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ A A+ + + E++ +++ N ++ ++R++ AL +
Sbjct: 240 ------SKVAAAWEV----------LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 283
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ C P+++TY ++D L +VGRV D A M + G PD + YN L+N L K
Sbjct: 284 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCK 343
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
++D + R GIKPD++TY+++I R+ ++E+ RL +K + P + +
Sbjct: 344 ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVIL 403
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
Y +LID L K GKVD A ++E M D
Sbjct: 404 YSTLIDGLCKAGKVDEAFDLYEVMAGDGCD 433
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 129/309 (41%), Gaps = 47/309 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA---ETNDIDLSFQILKDLLVS 62
+ C+ G + A R +R KN+ +PN + C ++ ID + + + + S
Sbjct: 16 LRGFCRGGEIDQAQRCFDEMRSKNL-VPNVFLCSILIDGLCKAKRSID-ALRCFRAMQGS 73
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ YT Q L + E+ +++ N +I K+ + ++A
Sbjct: 74 GIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRA 133
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVG------------------------------ 152
+F+H+K ++C P ++TYN +LD L R G
Sbjct: 134 QELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVIT 193
Query: 153 ------------RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
RV+ + SMK G PD I+Y L++ L K ++ REM
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 253
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
++G P+L+TY +L+ R + ++L L DM + P++ Y +LID L K+G+V
Sbjct: 254 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 313
Query: 261 LAMTIFEEM 269
A + +M
Sbjct: 314 DACAMLADM 322
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 97/176 (55%), Gaps = 1/176 (0%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ I P+ + ++ F + +I++A FD ++ P++ +I++D L + R
Sbjct: 1 MLPICQPD-VYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKR 59
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
D L F +M+ +G+V D + Y LL+ L K +RLD L EM + G +P+++TY +
Sbjct: 60 SIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNS 119
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LID + + + LF MK + PS+ Y +L+D L + GK++ AM +F+EM
Sbjct: 120 LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 175
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK V+AA +L+ + D +PN YN +L + + +++D+
Sbjct: 233 VDGLCKESKVAAAWEVLREMLDAGC-VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG 291
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + Y + +++ +++ N +I K+ Q+++++
Sbjct: 292 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 351
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ KPD++TY+ V+ L R R+++ +K G PD I Y+TL++ L
Sbjct: 352 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 411
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D + M G D++TY+ LID + G ++E+ L M + PS
Sbjct: 412 CKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPST 471
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y SLI L + +D A+ + EEM S
Sbjct: 472 MTYNSLIKGLCDLNHLDEAIELVEEMERS 500
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+A VS A+ L++ + + PN Y ++ + + + +L D++
Sbjct: 265 NSLLHGLCRARRVSDALALMRDMTCRGCT-PNVVTYGTLIDGLCKVGRVKDACAMLADMI 323
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y D + + + V ++ + +I+ +S +++
Sbjct: 324 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 383
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + ++K C PD+I Y+ ++D L + G+V++ + + M G D ++Y+TL+
Sbjct: 384 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLI 443
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R+D + M G P +TY +LI +++E++ L +M++
Sbjct: 444 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA 503
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
PS Y LI + +M +VD A+ + E+ +
Sbjct: 504 PSAVTYNILIHGMCRMERVDSAVVLLEQAKA 534
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 26/280 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILK------ 57
I+ LCK G V A +L + DK P+ YN ++ + + +D S +L+
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKG-GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361
Query: 58 ---DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
D++ S + C +N D+ +LL++++ P +I+ + +I
Sbjct: 362 IKPDVVTYSSVIYGLCRSN------RLDEACRLLLYVKSR---GCPPDVILYSTLIDGLC 412
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ ++++A +++ + G C D++TY+ ++D L + GRV++ A M G P +
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN+L+ L + LD + EM S P +TY LI R ++ ++ L
Sbjct: 473 TYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQA 532
Query: 235 KQQQIRPS-----IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
K + + Y SLID L K G+V A+ F+EM
Sbjct: 533 KARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEM 572
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+PD+ TY +L R G ++ F M+ +VP+ + L++ L K +R L
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
FR M SGI D + YTAL+ + ++++L + ++M+ P++ Y SLID L
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 254 KKMGKVDLAMTIFEEMNS 271
K + D A +FE M S
Sbjct: 125 CKNNEPDRAQELFEHMKS 142
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 113/239 (47%), Gaps = 8/239 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC++ + A RLL ++ + P+ Y+ ++ + +D +F + + +
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCP-PDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ + + + +V++ +P S + N +I +++A+
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 491
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND--MLNEFASMK---EAGVVPDFISYNT 178
+ + ++ C P +TYNI++ + R+ RV+ +L E A + G D I+Y++
Sbjct: 492 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSS 551
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L K R+ L YF+EM ++G+ PD +TY+ L++ ++ ++ E L D Q
Sbjct: 552 LIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 610
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+PD+ TY AL+ F R G I+++ R F++M+ + + P++++ LID L K + A+
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 265 IFEEMNSS 272
F M S
Sbjct: 66 CFRAMQGS 73
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 123/236 (52%), Gaps = 17/236 (7%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFAR--AFIMTDDCTQLLI-------------FIEE 93
D F +L DL + + C++ R F T C LL F ++
Sbjct: 28 FDALFSVLIDLGMVEEAIQ--CFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKD 85
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ + ++ N +I K +E A +F+ +K PD +TYN ++D G+VGR
Sbjct: 86 MIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGR 145
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++D + F MK+ PD I+YN L+N K +L L +FREM +G+KP++++Y+
Sbjct: 146 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYST 205
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+D+F + G ++++++ + DM++ + P+ Y Y SLID K+G + A + EM
Sbjct: 206 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 93/166 (56%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N +I F K +++ + F+ +K + C+PD+ITYN +++ + G++ L F
Sbjct: 131 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFRE 190
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK G+ P+ +SY+TL++ K + + ++ +M G+ P+ TYT+LID++ + GN
Sbjct: 191 MKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGN 250
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ RL N+M Q + ++ Y +LID L + + +EM
Sbjct: 251 LSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEM 296
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 7/269 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAETNDIDLSFQILK 57
CNG + K K G R + + +F YN ++ + D++ + + +
Sbjct: 63 CNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVF---TYNIMIDCMCKEGDVEAARGLFE 119
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ + Y + F + F EE+ + +I N +I F K
Sbjct: 120 EMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 179
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ K L F +K KP++++Y+ ++D + G + + + M+ G+VP+ +Y
Sbjct: 180 KLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 239
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ KI L EM + G++ +++TYTALID N E L L ++M +
Sbjct: 240 SLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVEL 299
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
I+ ++ + LID L K V A+ F
Sbjct: 300 DIKVTVVTFCVLIDGLCKNKLVSKAIDYF 328
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C P ++ + +L +G V + + F+ MK V P S N LL+ K+ + D
Sbjct: 21 CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+F++M +G KP + TY +ID + G++E + LF +MK + + P Y S+ID
Sbjct: 81 RFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140
Query: 254 KKMGKVDLAMTIFEEM 269
K+G++D + FEEM
Sbjct: 141 GKVGRLDDTVCFFEEM 156
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 120/270 (44%), Gaps = 4/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + + + ++ +N PN +Y+ ++ A + + + + D+
Sbjct: 169 NALINCFCKFGKLPKGLEFFREMK-RNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 227
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT+ A+ + + E++Q+ +++ +I
Sbjct: 228 RVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPT 287
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-EAGVVPDFISYNTL 179
+ L + D + L K ++T+ +++D L + V+ ++ F + + G+ + Y +
Sbjct: 288 EGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAM 347
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K +++ F +M + G+ PD YT+L+D + GN+ E+L L + M + +
Sbjct: 348 IDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGM 407
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + Y SL+ L ++ A + EEM
Sbjct: 408 KLDLLAYTSLVWGLSHCNQLQKARSFLEEM 437
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK G + A++ +R + +PN Y ++ A + ++ +F++ ++L
Sbjct: 207 VDAFCKEGMMQQAIKFYVDMRRVGL-VPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVG 265
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT ++ T+ L ++E+V++ +++ +I K++ + KA+
Sbjct: 266 VEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAI 325
Query: 124 LIFDHIKG-LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
F I + + Y ++D L + +V F M + G+VPD +Y +L++
Sbjct: 326 DYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDG 385
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K + L +M E+G+K DLL YT+L+ ++++ +M + I P
Sbjct: 386 NFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 445
Query: 243 IYVYRSLIDNLKKMGKVDLAMTI 265
+ S++ ++G ++ A+ +
Sbjct: 446 EVLCISVLKKHYELGCINEAVEL 468
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 123/239 (51%), Gaps = 2/239 (0%)
Query: 33 PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN +N ++ A ++N I+ + + +++ + + Y + + +
Sbjct: 856 PNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKI 915
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
EE+ + + N +I F K+ + A +F + +PDL +Y I+++ L
Sbjct: 916 FEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFM 975
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GRV+D ++ F +K G+ PD +SYN ++N L K RRL+ L F EM GI P+L T
Sbjct: 976 TGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYT 1035
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ALI FG G ++++ ++F +++ + P+++ Y +LI K G D A ++F++M
Sbjct: 1036 YNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E LCK+G V A +L +R + I +PN YN ++ +D + ++ ++
Sbjct: 374 VEALCKSGKVDQAFDMLDVMRVRGI-VPNLHTYNTLISGLLNLRRLDEALELFNNMESLG 432
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y F + D + L E++ + SI N +++ A+ +I +A
Sbjct: 433 VAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAK 492
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ I PD +TYN+++ + G+++ M G PD I N+L++ L
Sbjct: 493 DIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTL 552
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D F + + + P ++TY LI G+ G + ++L LF MK+ P+
Sbjct: 553 YKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNT 612
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +L+D L K VDLA+ +F M
Sbjct: 613 VTFNALLDCLCKNDAVDLALKMFCRM 638
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
PN Y + A + I + L + + L++ Y + C + L +
Sbjct: 157 PNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYK 216
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ S+ + ++ A + R + + + ++ L +P++ TY I + +LGR G
Sbjct: 217 RMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAG 276
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R++D +M++ G PD ++Y L++ L +LD + +M S KPDL+TY
Sbjct: 277 RIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYI 336
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+ FG G++E R +++M+ P + Y L++ L K GKVD A + + M
Sbjct: 337 TLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM 393
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
+I+ K G+ A+ + ++ + I +P+ A N L + AE I + I D+
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGI-MPSIAACNASLYSLAEMGRIREAKDIFNDIHNC 501
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ S Y + + + + E++ IIVVN +I K+ ++++A
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F +K LK P ++TYNI++ LG+ G++ L+ F SMKE+G P+ +++N LL+
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K +DL L F M PD+LTY +I + G + ++ MK + + P
Sbjct: 622 LCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPD 680
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEE 268
+L+ + K G+V+ A+ I E
Sbjct: 681 HVTLYTLLPGVVKDGRVEDAIKIVME 706
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 13 GNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
G + A L +R L +YN ++ + + ++ K ++ S Y
Sbjct: 171 GGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTY 230
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
+ A D ++ +EE+ + +I I ++ +I+ A I ++
Sbjct: 231 SALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMED 290
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
C PD++TY +++D L G+++ + M+ + PD ++Y TL++ L+
Sbjct: 291 EGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLET 350
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
++ EM G PD++TYT L+++ ++G ++++ + + M+ + I P+++ Y +LI
Sbjct: 351 VKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLIS 410
Query: 252 NLKKMGKVDLAMTIFEEMNS 271
L + ++D A+ +F M S
Sbjct: 411 GLLNLRRLDEALELFNNMES 430
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 81/136 (59%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD++TY I+++ L + G+V+ + M+ G+VP+ +YNTL++ L +RRLD L
Sbjct: 365 PDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALEL 424
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F M G+ P +Y ID +G+ G+ E++L F MK++ I PSI + + +L +
Sbjct: 425 FNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAE 484
Query: 256 MGKVDLAMTIFEEMNS 271
MG++ A IF ++++
Sbjct: 485 MGRIREAKDIFNDIHN 500
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 1/183 (0%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
L +F+E P +I N ++ A KS++I++ +++ + CKP++IT+NI++
Sbjct: 808 LKLFVEMKNAGCCP-NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIIS 866
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L + +N L+ + + P +Y L+ L K R + + F EM + KP
Sbjct: 867 ALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKP 926
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ Y LI+ FG+ GN+ + LF M ++ IRP + Y L++ L G+VD A+ F
Sbjct: 927 NCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYF 986
Query: 267 EEM 269
EE+
Sbjct: 987 EEL 989
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETN--DIDLSFQILKDLLVSS 63
I+ LC AG + A L +R + P+ + + S N D++ + ++
Sbjct: 304 IDALCAAGKLDKAKELYTKMRASS-HKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT A + Q ++ + ++ N +I R++++AL
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F++++ L P +Y + +D G++G L+ F MK+ G++P + N L +L
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ R+ F ++ G+ PD +TY ++ + + G I+++ +L +M + P I
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
V SLID L K G+VD A +F
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMF 565
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 111/239 (46%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P +YNC++ N + + ++ ++ + + Y A + +L
Sbjct: 788 PESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYN 847
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E++ +II N II A KS I KAL ++ I P TY ++ L + G
Sbjct: 848 EMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAG 907
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R + + F M + P+ YN L+N K +++ F+ M + GI+PDL +YT
Sbjct: 908 RSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYT 967
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L++ TG +++++ F ++K + P Y +I+ L K +++ A+++F EM +
Sbjct: 968 ILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKN 1026
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
+I K ++ A +FD K L P +YN ++D L L F MK A
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G P+ +YN LL+ K +R+D + EM G KP+++T+ +I + ++ +I ++
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L L+ ++ P+ Y LI L K G+ + AM IFEEM
Sbjct: 878 LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEM 919
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I L KAG A+++ + + D PN YN ++ + +++++ + K ++
Sbjct: 900 IGGLLKAGRSEEAMKIFEEMPDYQC-KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEG 958
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT MT + + EE+ + N +I KSR++E+AL
Sbjct: 959 IRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEAL 1018
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K P+L TYN ++ G G V+ F ++ G+ P+ +YN L+
Sbjct: 1019 SLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGH 1078
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
K D F++M G P+ T+ L
Sbjct: 1079 SKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+YN ++ L + G + L + M G+ P +Y+ L+ L + R + EM
Sbjct: 194 SYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEM 253
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G++P++ TYT I GR G I+++ + M+ + P + Y LID L GK+
Sbjct: 254 ETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKL 313
Query: 260 DLAMTIFEEMNSS 272
D A ++ +M +S
Sbjct: 314 DKAKELYTKMRAS 326
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K G P SYN L++ L + L F EM +G P++ TY L+D+ G++ I
Sbjct: 780 KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRI 839
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E L+N+M + +P+I + +I L K ++ A+ ++ E+ S
Sbjct: 840 DELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISG 887
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 35/165 (21%)
Query: 140 TYNIVLDILGRVGRVNDMLNEF-----------------------------------ASM 164
T N +L+ L GRV DM F M
Sbjct: 124 TCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKM 183
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++AG V + SYN L+ L + L ++ M G+KP + TY+AL+ + GR +
Sbjct: 184 RQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDT 243
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L +M+ +RP+IY Y I L + G++D A I + M
Sbjct: 244 GTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTM 288
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 106/185 (57%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L F +++V S+ N +I A+ +E A +F+ +K +PD++TYN ++D
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
G+VG + ++ F MK+AG PD I+YN+L+N K R+ Y M + G++P+
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++TY+ LID+F + G + E+ + F DM + ++P+ + Y SLID K+G ++ A +
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415
Query: 268 EMNSS 272
EM +
Sbjct: 416 EMQQA 420
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 32 LPNAYNC--VLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLI 89
LP +C +L ++++ L+ KD++V+ + S Y D
Sbjct: 213 LPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARS 272
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
EE+ I+ N +I + K + A+ +F+ +K C+PD+ITYN +++
Sbjct: 273 LFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFC 332
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ R+ MK+ G+ P+ ++Y+TL++ K L +F +M G++P+
Sbjct: 333 KFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEF 392
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
TYT+LID+ + G++ E+ +L ++M+Q + +I Y +L+D L + G++ A +F
Sbjct: 393 TYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELF 449
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 125/265 (47%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK G+++ A +L ++ + L Y +L E + + ++ LL +
Sbjct: 398 IDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGW 457
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
TL+ YT+ +I + + +EE+ + +++ I+ + +IE ++
Sbjct: 458 TLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMA 517
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + + Y ++D +VG+ + +N M++ G+ ++Y L++ L
Sbjct: 518 VIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLC 577
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
KI + + YF M +G++P+++ YTALID + +EE+ LFN+M + I P
Sbjct: 578 KIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLID K G A+++ M
Sbjct: 638 VYTSLIDGNMKHGNPGEALSLRNRM 662
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ +KS + AL F + P + TYN+V+ L R G + + F MK
Sbjct: 220 NELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKA 279
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ PD ++YN+L++ K+ L + F EM ++G +PD++TY +LI+ F + I +
Sbjct: 280 KGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQ 339
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + MKQ+ ++P++ Y +LID K G + A F +M
Sbjct: 340 AFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDM 382
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 15/189 (7%)
Query: 99 SPESIIVVNRIIFA---FAKSRQIEKALLI----------FDHIKGLK--CKPDLITYNI 143
+ ES V+ I+F + +R + K ++ FD + + C+P ++
Sbjct: 127 AAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCDFFDMLWSTRNVCRPGFGVFDT 186
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+ ++L +G + + F M + V+P S N LL+ L K + L L +F++M +G
Sbjct: 187 LFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAG 246
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+ P + TY +I R G++E + LF +MK + +RP I Y SLID K+G + A+
Sbjct: 247 LSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAV 306
Query: 264 TIFEEMNSS 272
++FEEM +
Sbjct: 307 SVFEEMKDA 315
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 130/269 (48%), Gaps = 7/269 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
+GYI KA + A+ +L+ + KN+ P+ Y + N+I+ S ++++++
Sbjct: 469 HGYI----KAKMMEKAMDILEEMNKKNL-KPDLLLYGTKIWGLCRQNEIEDSMAVIREMM 523
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T +S YT A+ T+ + ++E+ + +++ +I K ++
Sbjct: 524 DCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQ 583
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ FDH+ +P+++ Y ++D L + + + N F M + G+ PD + Y +L+
Sbjct: 584 QAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI 643
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K L M E G++ DL YT+LI F R G ++ + L ++M ++ I
Sbjct: 644 DGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGII 703
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + L+ ++G ++ A+ + ++M
Sbjct: 704 PDQVLCICLLRKYYELGDINEALALHDDM 732
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 127/278 (45%), Gaps = 17/278 (6%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAETNDIDLSFQILK 57
CN + +L K+ A+ + + ++F YN V+ A D++ + + +
Sbjct: 219 CNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVF---TYNMVIGCLAREGDLEAARSLFE 275
Query: 58 DLLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
++ ++ L D Y + + T + EE+ +I N +I F K
Sbjct: 276 EM--KAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333
Query: 116 SRQIEKALLIFDHIKGLK---CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+I +A F+++ G+K +P+++TY+ ++D + G + + F M G+ P+
Sbjct: 334 FERIPQA---FEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPN 390
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+Y +L++ KI L+ EM ++G+ +++TYTAL+D G + E+ LF
Sbjct: 391 EFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFG 450
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ + + +Y SL K ++ AM I EEMN
Sbjct: 451 ALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMN 488
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 118/270 (43%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G ++ AV + + ++D P+ YN ++ + I +F+ L +
Sbjct: 290 NSLIDGYGKVGMLTGAVSVFEEMKDAGC-EPDVITYNSLINCFCKFERIPQAFEYLHGMK 348
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y+ AF + F +++++ + +I A K +
Sbjct: 349 QRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLN 408
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + ++ +++TY +LD L GR+ + F ++ +AG + Y +L
Sbjct: 409 EAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLF 468
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + ++ + EM + +KPDLL Y I R IE+S+ + +M +
Sbjct: 469 HGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLT 528
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ Y+Y +LID K+GK A+ + +EM
Sbjct: 529 ANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A F + + P + + N +L L + + L+ F M AG+ P +YN
Sbjct: 197 LEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNM 256
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L + L+ F EM G++PD++TY +LID +G+ G + ++ +F +MK
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y SLI+ K ++ A M
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGM 347
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + L S++++ L AYN V+ + ++ ++Q+L+++
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE ++++ + +I F K +I++A L
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P+L T+N +LD L + +N+ L F SMKE P+ ++Y L+N L
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K+R+ + ++++EM + G+KP ++YT +I + GNI E+ LF+ K P
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
Y ++I+ L + A ++FEE
Sbjct: 799 CYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 31 FLPNAYNCV--LVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
F P+ C+ ++ + N + + +++ + + YT AF + +L
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+++ ++ ++ + +I FAK +++ AL + D +K D++ YN+ +D
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G+VG+V+ F ++ G+ PD ++Y +++ L K RLD + F + ++ P
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y +I +G G +E+ L + + PS+ Y ++ L+KMGKVD A+ +FEE
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 269 M 269
M
Sbjct: 369 M 369
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 139/269 (51%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
+++LCK+ + A + + + D + P+ C L+ + +D ++++ + +L S
Sbjct: 419 VDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 64 RTLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S YT+ + F +D + I+ + + Q SP+ + ++N + K+ + E
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHK--IYKDMINQNCSPD-LQLLNTYMDCMFKAGEPE 534
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K +F+ IK + PD +Y+I++ L + G N+ F SMKE G V D +YN ++
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +++ EM G +P ++TY ++ID + ++E+ LF + K ++I
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +Y SLID K+G++D A I EE+
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K G V A + + + N P+ Y ++ + N +D + ++ + L +
Sbjct: 245 IDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R + Y + + +E S S+I N I+ K ++++AL
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K P+L TYNI++D+L R G+++ SM++AG+ P+ + N +++ L
Sbjct: 364 KVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++LD F EM PD +T+ +LID G+ G ++++ +++ M R +
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLI N G+ + I+++M
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDM 508
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 119/252 (47%), Gaps = 3/252 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK G V+ A +LL+ ++ K F P Y V+ A+ + +D ++ + ++
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L+ Y++ F + + +EE++Q ++ N ++ A K+ +I +AL
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ F +K LKC P+ +TY I+++ L +V + N + M++ G+ P ISY T+++ L
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + F +G PD Y A+I+ ++ LF + +++ +
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
Query: 244 YVYRSLIDNLKK 255
L+D L K
Sbjct: 833 KTCVVLLDTLHK 844
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 125/268 (46%), Gaps = 8/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I K G V +A+ LL ++ D +I L YN + + + +D++++ ++
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVL---YNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT+ + + + E + + N +I + + + ++
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + + P +I YN +L L ++G+V++ L F MK+ P+ +YN L++
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILID 385
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + +LD M ++G+ P++ T ++D ++ ++E+ +F +M + P
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ SLID L K+G+VD A ++E+M
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 113/242 (46%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P +YN +L+ A + D QIL ++ V+ S + + + + ++
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ 157
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ + + +I AF+ + L +F ++ L +P + + ++ + G
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
RV+ L+ MK + + D + YN +++ K+ ++D+ +F E+ +G+KPD +TYT
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++I + ++E++ +F +++ + P Y Y ++I GK D A ++ E +
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 273 LS 274
S
Sbjct: 338 GS 339
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 126/265 (47%), Gaps = 4/265 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCKA + AV + + L +KN +P AYN +++ D ++ +L+
Sbjct: 283 LCKANRLDEAVEMFEHL-EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + L EE+ + A+P ++ N +I ++ +++ A +
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELR 400
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D ++ P++ T NI++D L + ++++ F M PD I++ +L++ L K+
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+D + +M +S + + + YT+LI +F G E+ +++ DM Q P + +
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +D + K G+ + +FEE+ +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKA 545
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 87/163 (53%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F K ++ KA + + +K +P ++TY V+D L ++ R+++ F K
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ + + Y++L++ K+ R+D + E+ + G+ P+L T+ +L+D+ + I E
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L F MK+ + P+ Y LI+ L K+ K + A ++EM
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+AG + A L S++ +F PN N ++ ++ +D + + +++
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLF-PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + + E+++ + IV +I F + E
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I+ + C PDL N +D + + G F +K VPD SY+ L++ L
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + F M E G D Y +ID F + G + ++ +L +MK + P++
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
Y S+ID L K+ ++D A +FEE S +L
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+YN +L ++ R + + M AG P + ++ K +L + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ +P YT LI +F + + L LF M++ P+++++ +LI K G+V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 260 DLAMTIFEEMNSSLSD 275
D A+++ +EM SS D
Sbjct: 220 DSALSLLDEMKSSSLD 235
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 132/266 (49%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKAGN A L +RD+ I LPN YN ++ + +D + +I ++
Sbjct: 372 VDALCKAGNFGEAFAKLDVMRDQGI-LPNLHTYNTLICGLLRVHRLDDALEIFDNMESLG 430
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y F + + D L E++ +I+ N +++ AK+ + +A
Sbjct: 431 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 490
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF +K + PD +TYN+++ +VG +++ + + M E PD I N+L+N L
Sbjct: 491 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTL 550
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D F M E +KP ++TY L+ G+ G I+E++ LF M Q+ P+
Sbjct: 551 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 610
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +L D L K +V LA+ + +M
Sbjct: 611 ITFNTLFDCLCKNDEVTLALKMLFKM 636
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I F K+ + + A +F + +PDL TY++++D L VGRV++ L+ F +
Sbjct: 930 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFREL 989
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES-GIKPDLLTYTALIDSFGRTGN 223
KE+G+ PD + YN ++N L K RL+ L+ F EM +S GI PDL TY +LI + G G
Sbjct: 990 KESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGM 1049
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+EE+ +++N++++ + P+++ + +LI GK + A +++ M
Sbjct: 1050 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1095
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 125/241 (51%), Gaps = 4/241 (1%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN +L A ++ ID F+I K++ ++ + + + L ++
Sbjct: 824 TYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883
Query: 95 V--QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ + SP + +I +KS ++ +A +F+ + C+P+ YNI+++ G+ G
Sbjct: 884 MSDRDFSPTAC-TYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAG 942
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ F M + GV PD +Y+ L++ L + R+D L YFRE+ ESG+ PD++ Y
Sbjct: 943 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYN 1002
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+I+ G+ +EE+L LFN+MK+ + I P +Y Y SLI NL G V+ A I+ E+
Sbjct: 1003 LIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1062
Query: 272 S 272
+
Sbjct: 1063 A 1063
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 134/276 (48%), Gaps = 10/276 (3%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC-----VLVASAETNDIDLSFQILKDL 59
+I+ K+G+ +A+ + ++ K I PN C L + + F LKD+
Sbjct: 441 FIDYYGKSGDSVSALETFEKMKTKGI-APNIVACNASLYSLAKAGRDREAKQIFYGLKDI 499
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ +++ Y + + + + + + E+V+ +IVVN +I K+ ++
Sbjct: 500 GLVPDSVT---YNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRV 556
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +F +K +K KP ++TYN +L LG+ G++ + + F M + G P+ I++NTL
Sbjct: 557 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 616
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L K + L L +M + G PD+ TY +I + G ++E++ F+ MK + +
Sbjct: 617 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLV 675
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
P +L+ + K G ++ A I S +D
Sbjct: 676 YPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCAD 711
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 98/189 (51%)
Query: 83 DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
D ++ ++E+ + ++ I ++ +I +A I + C PD++TY
Sbjct: 240 DIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 299
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+++D L +++ FA MK PD ++Y TLL+ R LD ++ EM +
Sbjct: 300 VLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD 359
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G PD++T+T L+D+ + GN E+ + M+ Q I P+++ Y +LI L ++ ++D A
Sbjct: 360 GHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 419
Query: 263 MTIFEEMNS 271
+ IF+ M S
Sbjct: 420 LEIFDNMES 428
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 34/261 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I L +AG ++ A +L+ + D+ P+ +++ +L D L ++R
Sbjct: 267 IRVLGRAGKINEAYEILKRMDDEGCG-PDV---------------VTYTVLIDALCTARK 310
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
L DC + +F + P+ + + ++ F+ +R ++
Sbjct: 311 L----------------DCAKE-VFAKMKTGRHKPDRVTYIT-LLDRFSDNRDLDSVNQF 352
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ ++ PD++T+ I++D L + G + + M++ G++P+ +YNTL+ L +
Sbjct: 353 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLR 412
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ RLD L F M G+KP TY ID +G++G+ +L F MK + I P+I
Sbjct: 413 VHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 472
Query: 246 YRSLIDNLKKMGKVDLAMTIF 266
+ + +L K G+ A IF
Sbjct: 473 CNASLYSLAKAGRDREAKQIF 493
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ +I A +R+++ A +F +K + KPD +TY +LD R D +N+F
Sbjct: 295 VVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSD-NRDLDSVNQFW 353
Query: 163 S-MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
S M++ G VPD +++ L++ L K M + GI P+L TY LI R
Sbjct: 354 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRV 413
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++++L +F++M+ ++P+ Y Y ID K G A+ FE+M +
Sbjct: 414 HRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 463
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I+V I ++F + +L K L +P L TYN+++ L + + F
Sbjct: 753 ILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 812
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+K G +PD +YN LL+ K ++D ++EM +P+ +T+ +I + GN
Sbjct: 813 VKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGN 872
Query: 224 IEESLRLFND-MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++++L L+ D M + P+ Y LID L K G++ A +FE M+
Sbjct: 873 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMS 920
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ A +IE+ +FD ++ K D TY + L G + M+E
Sbjct: 124 NYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMRE 183
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G V + SYN L++ L K R + +R M G +P L TY++L+ G+ +IE
Sbjct: 184 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIES 243
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ L +M+ ++P++Y + I L + GK++ A I + M+
Sbjct: 244 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 287
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K+ GV P +YN L+ L + +++ F ++ +G PD+ TY L+D++G++G I
Sbjct: 779 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKI 838
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+E ++ +M + P+ + +I L K G VD A+ ++ ++ S
Sbjct: 839 DELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMS 885
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K+G + A +L + + D PN YN ++ + + D + + K ++
Sbjct: 900 IDGLSKSGRLYEAKQLFEGMSDYGC-RPNCAIYNILINGFGKAGEADAACALFKRMVKEG 958
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ M + L + E+ + ++ N II K ++E+AL
Sbjct: 959 VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEAL 1018
Query: 124 LIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
++F+ +K + PDL TYN ++ LG G V + + ++ AG+ P+ ++N L+
Sbjct: 1019 VLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1078
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + ++ M G P+ TY L
Sbjct: 1079 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQS-LRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L + G A+ L L D + YN ++ + +F I K +L
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S+ Y + F + D + ++ +++++ S ++I N +I+ + K + A+
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + +KG KPD TY ++ R G++ + F M E G+ P+ ++Y +++
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++D L F +M ESG P TY +I F +T +I E+ M +Q + P++
Sbjct: 529 NLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVI 588
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y S ID L + G+ LA IF EM
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEM 613
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G V A ++ + + + PNA Y +++ +++DL+F + ++
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAY-PNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S Y+ + + +EE+VQ ++ + + +
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + +K C P++ T+ ++ L R G+ + + M G+VP ++YN L+
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L R + F+ M G P TY +I F G+I++++ +F+ M +
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +LI K G ++ AM + E M
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIM 473
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+ + N +I + E A IF + P TYN ++ +G + + F
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M +AG P+ I+YNTL+ K L+ + M +G+KPD TYT LI F R
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G +E + LF M + I P+ Y ++ID + KVD A+ +F +M S
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVES 546
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S++ N +I K ++++A LI HI P+ TY ++ R ++ F
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P+ ++Y+TL+N L RL+ + EM + GI+P + TYT + S
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDA 320
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G E++ L MK++ P+I + +LI L + GK ++A+ ++ +M
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+P L+T+N +++IL + GRV + + + P+ +Y +L+ + LDL
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F M + G P+ +TY+ LI+ G +EE++ + +M Q+ I P++Y Y
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L ++ +L LG+ V+ + + M +G+ P +++NT++N L K R+ +
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+ P+ TYT+LI R N++ + +F+ M + P+ Y +LI+ L G
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 258 KVDLAMTIFEEM 269
+++ AM + EEM
Sbjct: 287 RLEEAMDMLEEM 298
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 5/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I + G + A L + + I PN Y ++ +D + + ++ S
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGI-SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
SS Y F T+ ++ F ++V+ ++I I ++ + A
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND--MLNEFASMKEAGVVPDFISYNTLLN 181
IF ++ P+L TY+ ++ L + GR D M N A + G P+ +Y TL+
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R M + G++P Y AL+ + +E +L +F M +
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y++LI L K ++ A IF+ M
Sbjct: 728 HLSDYKALICALCKENFIEEAQCIFQTM 755
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 4/244 (1%)
Query: 32 LPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLI 89
LP++ YN ++ ++TN I + ++ + YT+F
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL--IFDHIKGLKCKPDLITYNIVLDI 147
E+ + ++ + +I+ + + E A + + + C+P++ TY ++
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L GR + SM++ G+ P Y LL K +++ L F M G +
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
L Y ALI + + IEE+ +F M ++ + L+D L K G+ DL + +
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLH 788
Query: 268 EMNS 271
M S
Sbjct: 789 VMES 792
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 13/218 (5%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCV-----LVASAETNDIDLSFQILKDL 59
+I+ LC+ G A ++ + +N F PN Y L D ++ + +L L
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYF-PNLYTYSSLIYGLCQEGRAEDAEM-YNLLARL 650
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCT---QLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ D YT + C QL++ +++ S E + ++ K+
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE---IYRALLIGECKN 707
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++E AL IF + L + L Y ++ L + + + F +M E D +++
Sbjct: 708 LKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAW 767
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
LL+ L K DLCL M + TY L
Sbjct: 768 TVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQS-LRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L + G A+ L L D + YN ++ + +F I K +L
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S+ Y + F + D + ++ +++++ S ++I N +I+ + K + A+
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + +KG KPD TY ++ R G++ + F M E G+ P+ ++Y +++
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++D L F +M ESG P TY +I F +T +I E+ M +Q + P++
Sbjct: 529 NLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVI 588
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y S ID L + G+ LA IF EM
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEM 613
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G V A ++ + + + PNA Y +++ +++DL+F + ++
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAY-PNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S Y+ + + +EE+VQ ++ + + +
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + +K C P++ T+ ++ L R G+ + + M G+VP ++YN L+
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L R + F+ M G P TY +I F G+I++++ +F+ M +
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +LI K G ++ AM + E M
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIM 473
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+ + N +I + E A IF + P TYN ++ +G + + F
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M +AG P+ I+YNTL+ K L+ + M +G+KPD TYT LI F R
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G +E + LF M + I P+ Y ++ID + KVD A+ +F +M S
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVES 546
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S++ N +I K ++++A LI HI P+ TY ++ R ++ F
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P+ ++Y+TL+N L RL+ + EM + GI+P + TYT + S
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDA 320
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G E++ L MK++ P+I + +LI L + GK ++A+ ++ +M
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+P L+T+N +++IL + GRV + + + P+ +Y +L+ + LDL
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F M + G P+ +TY+ LI+ G +EE++ + +M Q+ I P++Y Y
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L ++ +L LG+ V+ + + M +G+ P +++NT++N L K R+ +
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+ P+ TYT+LI R N++ + +F+ M + P+ Y +LI+ L G
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 258 KVDLAMTIFEEM 269
+++ AM + EEM
Sbjct: 287 RLEEAMDMLEEM 298
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 5/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I + G + A L + + I PN Y ++ +D + + ++ S
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGIS-PNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
SS Y F T+ ++ F ++V+ ++I I ++ + A
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND--MLNEFASMKEAGVVPDFISYNTLLN 181
IF ++ P+L TY+ ++ L + GR D M N A + G P+ +Y TL+
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R M + G++P Y AL+ + +E +L +F M +
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y++LI L K ++ A IF+ M
Sbjct: 728 HLSDYKALICALCKENFIEEAQCIFQTM 755
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 4/244 (1%)
Query: 32 LPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLI 89
LP++ YN ++ ++TN I + ++ + YT+F
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL--IFDHIKGLKCKPDLITYNIVLDI 147
E+ + ++ + +I+ + + E A + + + C+P++ TY ++
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L GR + SM++ G+ P Y LL K +++ L F M G +
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
L Y ALI + + IEE+ +F M ++ V+ L+D L K G+ DL + +
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLH 788
Query: 268 EMNS 271
M S
Sbjct: 789 VMES 792
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 13/218 (5%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCV-----LVASAETNDIDLSFQILKDL 59
+I+ LC+ G A ++ + +N F PN Y L D ++ + +L L
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYF-PNLYTYSSLIYGLCQEGRAEDAEM-YNLLARL 650
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCT---QLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ D YT + C QL++ +++ S E + ++ K+
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE---IYRALLIGECKN 707
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++E AL IF + L + L Y ++ L + + + F +M E D + +
Sbjct: 708 LKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVW 767
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
LL+ L K DLCL M + TY L
Sbjct: 768 TVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 3/256 (1%)
Query: 19 VRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFAR 76
V L + ++ + PN YNC++ A + D + QILK++ + + YT
Sbjct: 121 VGLFEEMKQAGV-QPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMIN 179
Query: 77 AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP 136
+ + + + EE+ ++ + N ++ A+A+ + EKA+ +F ++ C P
Sbjct: 180 SLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIP 239
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
DL TYN V+D+ GR G + F M+ G PD ++YNT+L+ K R
Sbjct: 240 DLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLL 299
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
+ M +G PDL TY L+D+ G+ G+ E++++F+++K P++ + +LI+ ++
Sbjct: 300 KTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRL 359
Query: 257 GKVDLAMTIFEEMNSS 272
G + A + EM ++
Sbjct: 360 GYFEEAERAWVEMRAT 375
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 6/219 (2%)
Query: 53 FQILKDLLVSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
F+ +K+ S L+ + N RA+ + D L+ EE+ Q + I N ++
Sbjct: 88 FEAMKEKGCSPNVLTYNTLINACTKRAYRLPD----LVGLFEEMKQAGVQPNDITYNCMV 143
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
A + A I +K + C P++I+Y +++ LGR GR+++ + F MKE G
Sbjct: 144 NACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRS 203
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ +YN+LL + R + + F M + G PDL TY +ID GR G E+ +
Sbjct: 204 PNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGV 263
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F +M+++ P Y +++D K + A + + M
Sbjct: 264 FLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTM 302
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 38/220 (17%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
Q+ F++E ++ E V II + ++ A IF+ + P + Y +L
Sbjct: 15 QVFRFLQEHLEYELKEHNCVT--IISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALL 72
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGESGI 204
+ G + + F +MKE G P+ ++YNTL+N ++ RL + F EM ++G+
Sbjct: 73 SGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGV 132
Query: 205 K-----------------------------------PDLLTYTALIDSFGRTGNIEESLR 229
+ P++++YT +I+S GR+G ++E++
Sbjct: 133 QPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVE 192
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LF +MK+ P+ + Y SL+ + G+ + AM +F M
Sbjct: 193 LFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGM 232
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++ ILGR G++ F M +AGV P +Y LL+ K L F M E G
Sbjct: 36 IISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKG 95
Query: 204 IKPDLLTYTALIDSFG-RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
P++LTY LI++ R + + + LF +MKQ ++P+ Y +++ + D A
Sbjct: 96 CSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTA 155
Query: 263 MTIFEEMNS 271
I +EM +
Sbjct: 156 SQILKEMKA 164
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T+++ L + +L L F M ++G+ P + YTAL+ + + G ++E+ LF MK++
Sbjct: 35 TIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94
Query: 238 QIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
P++ Y +LI+ K+ ++ + +FEEM +
Sbjct: 95 GCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQA 130
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 135/271 (49%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ +AG+V AA+ L+ S+ ++ + P YN VL + D + ++ + +
Sbjct: 196 NVLIDARFRAGDVDAAIALVDSMANRGL-KPGIVTYNSVLKGLCKHRRFDKAKEVFRTMD 254
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + F + + + F +E+ ++ + +I F++ +++
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMD 314
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +KGL PD + Y +V+ R G +++ L M G +PD ++YNTLL
Sbjct: 315 HAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLL 374
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K RL EM E G+ PDL T+T LI + R GN E +L+LF+ + +Q++R
Sbjct: 375 NGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLR 434
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y SLID + + G + A ++++M++
Sbjct: 435 PDVVTYNSLIDGMCRKGDLAKANELWDDMHA 465
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 130/272 (47%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL- 59
N ++ LCK A + +++ D+ P+ ++N ++ ++ + + K++
Sbjct: 231 NSVLKGLCKHRRFDKAKEVFRTM-DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQ 289
Query: 60 --LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
V+ +S C F + ++ E+ + ++ +I F ++
Sbjct: 290 HRYVTPDVVSFSCLIGL---FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ +AL + D + G C PD++TYN +L+ L + R+ D M+E GV PD ++
Sbjct: 347 SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFT 406
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ + + L F + ++PD++TY +LID R G++ ++ L++DM +
Sbjct: 407 TLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR 466
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I P+ Y LID+ + G+V+ A +EM
Sbjct: 467 EILPNHITYSILIDSHCEKGQVEDAFGFLDEM 498
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 87/167 (52%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+N ++ ++ K+ + + A + ++ PD++T+N+++D R G V+ + SM
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
G+ P ++YN++L L K RR D FR M + + PD+ ++ LI F R G +
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+E+++ + +M+ + + P + + LI + G++D A EM
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKG 325
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 129/274 (47%), Gaps = 13/274 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF---LPN--AYNCVLVASAETNDIDLSFQILKDLL 60
I C+AG++S A+R+ RD+ + LP+ YN +L + + + + ++L ++
Sbjct: 339 IGGFCRAGSMSEALRV----RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM- 393
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R ++ D +T + + L + +++ ++ N +I +
Sbjct: 394 -EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGD 452
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ KA ++D + + P+ ITY+I++D G+V D M + G +P+ +YN+
Sbjct: 453 LAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ + + + ++M + + PDL+T+ LI + + N+ + +FN M+++
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+RP Y +I+ + G + A +F+ M S
Sbjct: 573 VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDS 606
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 109/238 (45%), Gaps = 3/238 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C+ GN A++L +L + + P+ YN ++ D+ + ++ D+
Sbjct: 409 IHGYCRQGNFENALQLFDTLLRQRL-RPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ + F++E+V+ + +I N II + +S ++K
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQ 527
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ PDLIT+N ++ + ++ N F M++ V PD ++YN ++N
Sbjct: 528 QFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGF 587
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + F+ MG+SGI+PD TY +LI+ GN +++ +L ++M + P
Sbjct: 588 SEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + + Q+E A D + P++ TYN ++ R G V M++
Sbjct: 478 LIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDN 537
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V PD I++NTL++ K + F M + ++PD +TY +I+ F GN++++
Sbjct: 538 VFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAG 597
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
R+F M I P Y Y SLI+ G A + +EM
Sbjct: 598 RVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEM 638
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 136/308 (44%), Gaps = 44/308 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL---- 59
I C+ G V AV+ + ++ + + P+ +++C++ + ++D + L+++
Sbjct: 269 IGGFCRVGEVKEAVKFYKEMQHRYV-TPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327
Query: 60 LVSSRTLSSDCYTNFARAFIMTD----------------------------------DCT 85
LV + + F RA M++ D
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+LL +EE + +P+ + +I + + E AL +FD + + +PD++TYN ++
Sbjct: 388 KLLNEMEE--RGVTPD-LCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
D + R G + + M ++P+ I+Y+ L+++ + +++ + EM + G
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P++ TY ++I + R+GN+++ + M+Q + P + + +LI K + A +
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564
Query: 266 FEEMNSSL 273
F M +
Sbjct: 565 FNIMEKEM 572
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 76/166 (45%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I + +SR+ +A F + + N +L +L R G + + +
Sbjct: 89 VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLV 148
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ + + N ++++ K D EM + + PD++T+ LID+ R G++
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDV 208
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ ++ L + M + ++P I Y S++ L K + D A +F M+
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMD 254
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 4/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK GNV A +LL + K + PN Y+ ++ ++ + ++L+++
Sbjct: 131 NSLVDGFCKRGNVDDARKLLGIMVAKGMR-PNVVTYSALIDGLCKSQKFLEAKEVLEEMK 189
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T + Y+ D + + + ++V + II AF KS ++
Sbjct: 190 ASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 249
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG-VVPDFISYNTL 179
+A ++ + PD++TYN V+D L ++G++ + M+E+G V+PD ++Y+T+
Sbjct: 250 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTV 309
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L K L M ++G PD++TYT +ID + G +EE+ L MK+
Sbjct: 310 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 369
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y +LI L K KVD A + EEM ++
Sbjct: 370 APNVVTYTTLISGLCKARKVDEAERVMEEMRNA 402
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 139/300 (46%), Gaps = 41/300 (13%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
C AG++ AA+ LL+ ++ F P+A + ++ A A D+D + L+ + ++
Sbjct: 1 CNAGDLHAALELLEEMKSAG-FAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVT 59
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA----- 122
YT AF + + +EE+ + P +++ N ++ A K + A
Sbjct: 60 ---YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 123 ----------LLIFDHIKGLKCK--------------------PDLITYNIVLDILGRVG 152
++ F+ + CK P+++TY+ ++D L +
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ + MK +GV PD +Y+ L++ L K +++ R M SG PD++ Y+
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++I +F ++G + E+ + +M++Q+ P + Y ++ID L K+GK+ A I ++M S
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK+ A +L+ ++ + P+A Y+ ++ + + I+ + Q+L+ + S
Sbjct: 169 IDGLCKSQKFLEAKEVLEEMKASGV-TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T Y++ AF + + ++E+ + ++ N +I K +I +A
Sbjct: 228 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 287
Query: 124 LIFDH-----------------IKGL-------------------KCKPDLITYNIVLDI 147
+I D I GL C PD++TY ++D
Sbjct: 288 VILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 347
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + GR+ + MK AG P+ ++Y TL++ L K R++D EM +G P+
Sbjct: 348 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 407
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMK--QQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
L+TY +++ +G I+E+ +L MK + + P YR++++ L V A +
Sbjct: 408 LVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQL 467
Query: 266 FEEM 269
E+M
Sbjct: 468 LEQM 471
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 100/234 (42%), Gaps = 35/234 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ LCK G ++ A +L +++ LP+ V+ S N + S D+LV
Sbjct: 271 NTVIDGLCKLGKIAEAQVILDQMQESGDVLPD----VVTYSTVINGLCKS-----DMLVE 321
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
++ L ++ + + ++ II K ++E+A
Sbjct: 322 AQKL------------------------LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +K C P+++TY ++ L + +V++ M+ AG P+ ++YNT++N
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Query: 183 LRKIRRLDLCLIYFREM--GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
L R+ + M G + PD TY ++++ + ++E+ +L M
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + L S++++ L AYN V+ + ++ ++Q+L+++
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE ++++ + +I F K +I++A L
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N +LD L + +N+ L F SMKE P+ ++Y L+N L
Sbjct: 679 ILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K+R+ + ++++EM + G+KP ++YT +I + GNI E+ LF+ K P
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
Y ++I+ L + A ++FEE
Sbjct: 799 CYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
Query: 31 FLPNAYNCV--LVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
F P+ C+ +++ + N + F +++++ + YT AF + +L
Sbjct: 129 FGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+++ ++ ++ + +I FAK +++ AL + D +K D++ YN+ +D
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G+VG+V+ F ++ G+ PD ++Y +++ L K RLD + F + ++ P
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y +I +G G +E+ L + + PS+ Y ++ L+KMGKVD A+ +FEE
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEE 368
Query: 269 M 269
M
Sbjct: 369 M 369
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 139/269 (51%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
+++LCK+ + A + + + D + P+ C L+ + +D +++I + +L S
Sbjct: 419 VDRLCKSQKLDEACAIFEQM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSD 477
Query: 64 RTLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S YT+ + F +D + I+ + V Q SP+ + ++N + K+ + E
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHK--IYKDMVNQNCSPD-LQLLNTYMDCMFKAGEPE 534
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K +F+ IK + PD +Y+I++ L + G N+ F SMKE G V D +YN ++
Sbjct: 535 KGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +++ EM G +P ++TY ++ID + ++E+ LF + K ++I
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +Y SLID K+G++D A I EE+
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K G V A + + + N P+ Y ++ + N +D + ++ + L +
Sbjct: 245 IDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R + Y + + +E S S+I N I+ K ++++AL
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K P+L TYNI++D+L R G+++ SM++AG+ P+ + N +++ L
Sbjct: 364 RVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++LD F +M PD +T+ +LID G+ G ++++ +++ M R +
Sbjct: 423 CKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNS 482
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLI N G+ + I+++M
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDM 508
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 119/252 (47%), Gaps = 3/252 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK G V+ A +LL+ ++ K F P Y V+ A+ + +D ++ + ++
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L+ Y++ F + + +EE++Q ++ N ++ A K+ +I +AL
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEAL 712
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ F +K LKC P+ +TY I+++ L +V + N + M++ G+ P ISY T+++ L
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + F +G PD Y A+I+ ++ LF + +++ +
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHN 832
Query: 244 YVYRSLIDNLKK 255
L+D L K
Sbjct: 833 KTCVVLLDTLHK 844
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 114/242 (47%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P +YN +L+ A + D QIL ++ V+ S + + + + + ++
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQ 157
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ + + +I AF+ + L +F ++ L +P + + ++ + G
Sbjct: 158 NMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
RV+ L+ MK + + D + YN +++ K+ ++D+ +F E+ +G+KPD +TYT
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++I + ++E++ +F +++ + P Y Y ++I GK D A ++ E +
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 273 LS 274
S
Sbjct: 338 GS 339
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 127/269 (47%), Gaps = 10/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I K G V +A+ LL ++ D +I L YN + + + +D++++ ++
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVL---YNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT+ + + + E + + N +I + + + ++
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + + P +I YN +L L ++G+V++ L F MK+ P+ +YN L++
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK-DAAPNLSTYNILID 385
Query: 182 NLRKIRRLDLCLIYFRE-MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + +LD C R+ M ++G+ P++ T ++D ++ ++E+ +F M +
Sbjct: 386 MLCRAGKLD-CAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCT 444
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + SLID L K+G+VD A I+E+M
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKIYEKM 473
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 126/265 (47%), Gaps = 4/265 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCKA + AV + + L +KN +P AYN +++ D ++ +L+
Sbjct: 283 LCKANRLDEAVEMFEHL-EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + L EE+ + A+P ++ N +I ++ +++ A +
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDCAFELR 400
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D ++ P++ T NI++D L + ++++ F M PD I++ +L++ L K+
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKV 460
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+D + +M +S + + + YT+LI +F G E+ +++ DM Q P + +
Sbjct: 461 GRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLL 520
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +D + K G+ + +FEE+ S
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKS 545
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 87/163 (53%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F K ++ KA + + +K +P ++TY V+D L ++ R+++ F K
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ + + Y++L++ K+ R+D + E+ + G+ P++ T+ +L+D+ + I E
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINE 710
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L F MK+ + P+ Y LI+ L K+ K + A ++EM
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 114/273 (41%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+AG + A L S++ +F PN N ++ ++ +D + I + +
Sbjct: 384 IDMLCRAGKLDCAFELRDSMQKAGLF-PNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKV 442
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + + E+++ + IV +I F + E
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I+ + C PDL N +D + + G F +K VPD SY+ L++ L
Sbjct: 503 KIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGL 562
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + F M E G D Y +ID F + G + ++ +L +MK + P++
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
Y S+ID L K+ ++D A +FEE S +L
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+YN +L ++ R + + M AG P + ++ + K +L + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ +P YT LI +F + + L LF M++ P+++++ +LI K G+V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 260 DLAMTIFEEMNSSLSD 275
D A+++ +EM SS D
Sbjct: 220 DSALSLLDEMKSSSLD 235
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 124/236 (52%), Gaps = 17/236 (7%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFAR--AFIMTDDCTQLLI-------------FIEE 93
D F +L DL + + C++ R F T C LL F ++
Sbjct: 195 FDALFSVLIDLGMLEEAIQ--CFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ + ++ N +I K +E A +F+ +K PD +TYN ++D G+VGR
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++D + F MK+ PD I+YN L+N K +L + L ++REM +G+KP++++Y+
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+D+F + G ++++++ + DM++ + P+ Y Y SLID K+G + A + EM
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 97/169 (57%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N +I F K +++ + F+ +K + C+PD+ITYN +++ + G++ L +
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK G+ P+ +SY+TL++ K + + ++ +M G+ P+ TYT+LID+ + GN
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ RL N+M Q + ++ Y +LID L ++ A +F +M+++
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 134/273 (49%), Gaps = 17/273 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLS---FQILKDLL 60
I+ +CK G+V AA L + ++ + + +P+ YN ++ + +D + F+ +KD+
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGL-VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 61 VSSRTLSSD----CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
++ + C+ F + I L F E+ +++ + ++ AF K
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIG-------LEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++A+ + ++ + P+ TY ++D ++G ++D M + GV + ++Y
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L++ L R+ F +M +G+ P+L +Y ALI F + N++ +L L N++K
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I+P + +Y + I L + K++ A + EM
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 120/274 (43%), Gaps = 7/274 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAETNDIDLSFQILK 57
CNG + + K G R + + +F YN ++ + D++ + + +
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVF---TYNIMIDCMCKEGDVEAARGLFE 286
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ + Y + F + F EE+ + +I N +I F K
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ L + +KG KP++++Y+ ++D + G + + + M+ G+VP+ +Y
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ KI L EM + G++ +++TYTALID ++E+ LF M
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P++ Y +LI K +D A+ + E+
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 12/183 (6%)
Query: 99 SPESIIVVNRIIFA---FAKSRQIEKALL-------IFDHIKGLK--CKPDLITYNIVLD 146
S ES +V I+F + + + K ++ +FD + + C P ++ +
Sbjct: 141 SVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFS 200
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+L +G + + + F+ MK V P S N LL+ K+ + D +F++M +G +P
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 260
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ TY +ID + G++E + LF +MK + + P Y S+ID K+G++D + F
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 267 EEM 269
EEM
Sbjct: 321 EEM 323
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 122/274 (44%), Gaps = 3/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + + + ++ N PN +Y+ ++ A + + + + D+
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKG-NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT+ A + + E++Q+ +++ +I + +++
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + P+L +YN ++ + ++ L +K G+ PD + Y T +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + +++ + EM E GIK + L YT L+D++ ++GN E L L ++MK+ I
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
++ + LID L K V A+ F +++
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 125/271 (46%), Gaps = 12/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC A + A L + + +PN +YN ++ + ++D + ++L +L
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGV-IPNLASYNALIHGFVKAKNMDRALELLNEL--KG 500
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R + D Y F + + + E+ + + ++ ++ A+ KS +
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNT 178
L + D +K L + ++T+ +++D L + V + D N ++ + G+ + +
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN--DFGLQANAAIFTA 618
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K +++ F +M + G+ PD YT+L+D + GN+ E+L L + M +
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + Y SL+ L ++ A + EEM
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 121/268 (45%), Gaps = 8/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I KA N+ A+ LL L+ + I P+ Y + I+ + ++ ++
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGRGI-KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S YT A+ + + T+ L ++E+ ++ +++ +I K++ +
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 121 KALLIFDHIK---GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
KA+ F+ I GL+ + T ++D L + +V F M + G+VPD +Y
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFT--AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ K + L +M E G+K DLL YT+L+ ++++ +M +
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
I P + S++ ++G +D A+ +
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVEL 740
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 124/235 (52%), Gaps = 17/235 (7%)
Query: 50 DLSFQILKDLLVSSRTLSSDCYTNFAR--AFIMTDDCTQLLI-------------FIEEV 94
D F +L DL + + C++ R F T C LL F +++
Sbjct: 64 DALFSVLIDLGMLEEAIQ--CFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 121
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ + ++ N +I K +E A +F+ +K PD +TYN ++D G+VGR+
Sbjct: 122 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 181
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+D + F MK+ PD I+YN L+N K +L + L ++REM +G+KP++++Y+ L
Sbjct: 182 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 241
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+D+F + G ++++++ + DM++ + P+ Y Y SLID K+G + A + EM
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 97/169 (57%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N +I F K +++ + F+ +K + C+PD+ITYN +++ + G++ L +
Sbjct: 166 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 225
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK G+ P+ +SY+TL++ K + + ++ +M G+ P+ TYT+LID+ + GN
Sbjct: 226 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 285
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ RL N+M Q + ++ Y +LID L ++ A +F +M+++
Sbjct: 286 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 334
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 134/273 (49%), Gaps = 17/273 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLS---FQILKDLL 60
I+ +CK G+V AA L + ++ + + +P+ YN ++ + +D + F+ +KD+
Sbjct: 137 IDCMCKEGDVEAARGLFEEMKFRGL-VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 195
Query: 61 VSSRTLSSD----CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
++ + C+ F + I L F E+ +++ + ++ AF K
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIG-------LEFYREMKGNGLKPNVVSYSTLVDAFCKE 248
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++A+ + ++ + P+ TY ++D ++G ++D M + GV + ++Y
Sbjct: 249 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 308
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L++ L R+ F +M +G+ P+L +Y ALI F + N++ +L L N++K
Sbjct: 309 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 368
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I+P + +Y + I L + K++ A + EM
Sbjct: 369 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 401
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 120/272 (44%), Gaps = 7/272 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAETNDIDLSFQILK 57
CNG + + K G R + + +F YN ++ + D++ + + +
Sbjct: 98 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVF---TYNIMIDCMCKEGDVEAARGLFE 154
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ + Y + F + F EE+ + +I N +I F K
Sbjct: 155 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 214
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ L + +KG KP++++Y+ ++D + G + + + M+ G+VP+ +Y
Sbjct: 215 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 274
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ KI L EM + G++ +++TYTALID ++E+ LF M
Sbjct: 275 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 334
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P++ Y +LI K +D A+ + E+
Sbjct: 335 GVIPNLASYNALIHGFVKAKNMDRALELLNEL 366
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 122/274 (44%), Gaps = 3/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + + + ++ N PN +Y+ ++ A + + + + D+
Sbjct: 204 NALINCFCKFGKLPIGLEFYREMKG-NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 262
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT+ A + + E++Q+ +++ +I + +++
Sbjct: 263 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 322
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + P+L +YN ++ + ++ L +K G+ PD + Y T +
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 382
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + +++ + EM E GIK + L YT L+D++ ++GN E L L ++MK+ I
Sbjct: 383 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 442
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
++ + LID L K V A+ F +++
Sbjct: 443 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 476
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 12/183 (6%)
Query: 99 SPESIIVVNRIIFA---FAKSRQIEKALL-------IFDHIKGLK--CKPDLITYNIVLD 146
S ES +V I+F + + + K ++ +FD + + C P ++ +
Sbjct: 9 SVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFS 68
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+L +G + + + F+ MK V P S N LL+ K+ + D +F++M +G +P
Sbjct: 69 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 128
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ TY +ID + G++E + LF +MK + + P Y S+ID K+G++D + F
Sbjct: 129 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 188
Query: 267 EEM 269
EEM
Sbjct: 189 EEM 191
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 125/271 (46%), Gaps = 12/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC A + A L + D +PN +YN ++ + ++D + ++L +L
Sbjct: 312 IDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL--KG 368
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R + D Y F + + + E+ + + ++ ++ A+ KS +
Sbjct: 369 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 428
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNT 178
L + D +K L + ++T+ +++D L + V + D N ++ + G+ + +
Sbjct: 429 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN--DFGLQANAAIFTA 486
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K +++ F +M + G+ PD YT+L+D + GN+ E+L L + M +
Sbjct: 487 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 546
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + Y SL+ L ++ A + EEM
Sbjct: 547 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 121/268 (45%), Gaps = 8/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I KA N+ A+ LL L+ + I P+ Y + I+ + ++ ++
Sbjct: 344 NALIHGFVKAKNMDRALELLNELKGRGI-KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 402
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S YT A+ + + T+ L ++E+ ++ +++ +I K++ +
Sbjct: 403 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 462
Query: 121 KALLIFDHIK---GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
KA+ F+ I GL+ + T ++D L + +V F M + G+VPD +Y
Sbjct: 463 KAVDYFNRISNDFGLQANAAIFT--AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 520
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ K + L +M E G+K DLL YT+L+ ++++ +M +
Sbjct: 521 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 580
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
I P + S++ ++G +D A+ +
Sbjct: 581 GIHPDEVLCISVLKKHYELGCIDEAVEL 608
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG L +++++ L +AYN + ++ ++ ++Q+L+++ R
Sbjct: 589 IHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGR 648
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE ++++ + +I F K +I++A L
Sbjct: 649 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYL 708
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N +LD L + +N+ L F +MK P+ I+Y+ L+N L
Sbjct: 709 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLC 768
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++R+ + ++++EM + G+KP+ +TYT +I + GNI E+ LF K P
Sbjct: 769 RVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSA 828
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
Y ++I+ L + A IFEE
Sbjct: 829 SYNAIIEGLSYSRRAMEAYKIFEE 852
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ KAG V A + ++ + LP+ Y ++ + N +D + +I + + +
Sbjct: 275 IDCFGKAGKVDMAWKFFHEIKSHGL-LPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNR 333
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + +E S+I N I+ K ++ +AL
Sbjct: 334 NVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEAL 393
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F+ +K P+L TYN+++D+L + G V +MKEAG+ P+ ++ N +++ L
Sbjct: 394 RTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRL 452
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++LD F M PD +T+ +LID G+ G ++++ RL+ M P+
Sbjct: 453 CKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNA 512
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLI + K G+ + IF+EM
Sbjct: 513 VVYTSLIKSFFKCGRKEDGHKIFKEM 538
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 138/269 (51%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
I++LCKA + A + + + K I P+ C L+ + +D ++++ + +L S
Sbjct: 449 IDRLCKAKKLDEACSIFEGMNHK-ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSD 507
Query: 64 RTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT+ ++F +D + IF E + + SP+ + ++N + K+ +
Sbjct: 508 KIPNAVVYTSLIKSFFKCGRKEDGHK--IFKEMIHRGCSPD-LRLLNAYMDCVFKAGETG 564
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K +F+ IK PD+++Y+I++ L + G + F +MKE G V D +YNT +
Sbjct: 565 KGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFI 624
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +++ EM G +P ++TY ++ID + ++E+ LF + K +
Sbjct: 625 DGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLE 684
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +Y SLID K+G++D A I EE+
Sbjct: 685 LNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 114/241 (47%), Gaps = 2/241 (0%)
Query: 31 FLPNAYNCV--LVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
F P+ C+ +++ ++N + F +++ + + YT A + +L
Sbjct: 159 FGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIML 218
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
++ ++ S+ + +I FA+ +++ AL + D +K D++ YN+ +D
Sbjct: 219 TLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCF 278
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G+ G+V+ F +K G++PD ++Y +++ L K RLD + F +M ++ P
Sbjct: 279 GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y +I +G G +E+ L K + PS+ Y ++ L K G++ A+ FEE
Sbjct: 339 YAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEE 398
Query: 269 M 269
M
Sbjct: 399 M 399
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 6/267 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I + G + AA+ LL ++ + YN + + +D++++ + + S
Sbjct: 240 IRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHE--IKSH 297
Query: 65 TLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
L D YT+ + + + E++ Q + N +I + + + ++A
Sbjct: 298 GLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEA 357
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + K C P +I YN +L LG+ GR+ + L F MK+ P+ +YN L++
Sbjct: 358 YSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDM 416
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K ++ M E+G+ P+++T +ID + ++E+ +F M + P
Sbjct: 417 LCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPD 476
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ SLID L K G+VD A ++E+M
Sbjct: 477 EVTFCSLIDGLGKQGRVDDAYRLYEQM 503
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 126/255 (49%), Gaps = 3/255 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I+ CK+G V+ A +LL+ ++ K P Y V+ A+ + +D ++ + ++
Sbjct: 621 NTFIDGFCKSGKVNKAYQLLEEMKTKGR-QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 679
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L+ Y++ F + + +EE++Q ++ N ++ A K+ +I
Sbjct: 680 SNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIN 739
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL+ F ++K LK P+ ITY+I+++ L RV + N + M++ G+ P+ I+Y T++
Sbjct: 740 EALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 799
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K + F +G PD +Y A+I+ + E+ ++F + + +
Sbjct: 800 AGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCN 859
Query: 241 PSIYVYRSLIDNLKK 255
+L+D L+K
Sbjct: 860 IHTKTCIALLDALQK 874
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 126/264 (47%), Gaps = 2/264 (0%)
Query: 9 LCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCK + AV + + + +++N+ AYN +++ D ++ +L+ S
Sbjct: 313 LCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPS 372
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + L EE+ + A+P ++ N +I K+ ++E A + D
Sbjct: 373 VIAYNCILTCLGKKGRLGEALRTFEEMKKDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRD 431
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K P+++T NI++D L + ++++ + F M PD +++ +L++ L K
Sbjct: 432 AMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQG 491
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R+D + +M +S P+ + YT+LI SF + G E+ ++F +M + P + +
Sbjct: 492 RVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLN 551
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
+ +D + K G+ +FEE+ S
Sbjct: 552 AYMDCVFKAGETGKGRALFEEIKS 575
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 51/303 (16%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AG A LL+ + + +P+ AYNC+L + + + + +++ D
Sbjct: 351 AGKFDEAYSLLERQKARGC-IPSVIAYNCILTCLGKKGRLGEALRTFEEM-------KKD 402
Query: 70 CYTNFARAFIMTDD-CTQLLIFIEEVVQIASPES-----IIVVNRIIFAFAKSRQIEKAL 123
N + ++ D C + V+ A E+ ++ VN +I K++++++A
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEAC 462
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + C PD +T+ ++D LG+ GRV+D + M ++ +P+ + Y +L+ +
Sbjct: 463 SIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSF 522
Query: 184 RKIRRLDLCLIYFREM----------------------GESG--------IK-----PDL 208
K R + F+EM GE+G IK PD+
Sbjct: 523 FKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDV 582
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++Y+ LI + G E+ LF MK+Q + Y + ID K GKV+ A + EE
Sbjct: 583 MSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE 642
Query: 269 MNS 271
M +
Sbjct: 643 MKT 645
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
+I + KS ++ + + ++ K +P Y ++ L V + ML F M+E
Sbjct: 168 ELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQEL 227
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G + T++ + RLD L EM + + D++ Y ID FG+ G ++ +
Sbjct: 228 GYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMA 287
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ F+++K + P Y S+I L K ++D A+ IFE+M +
Sbjct: 288 WKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQN 332
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMK---EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
++V+ +L R VN ++ F + + + P+ +Y++LL + K + D E
Sbjct: 96 DLVIGVLRRAKDVNQAISYFRWTERKTDQALCPE--AYDSLLLVMAKNVKFDYFEQILGE 153
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M +G P T LI S ++ + E L M++ + RP+ Y +LI L + +
Sbjct: 154 MSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQE 213
Query: 259 VDLAMTIFEEMN 270
D+ +T+F +M
Sbjct: 214 SDIMLTLFHQMQ 225
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 137/272 (50%), Gaps = 6/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C AG A+ L QS++ + P+ YN ++ + + + + ++L ++ +
Sbjct: 52 INSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKN 111
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y++ ++ + + +EE++ + N ++ FA+S +EKA
Sbjct: 112 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 171
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYNTLL 180
++ H+ KPD ++Y+I++ L ++G++++ +L+E A M+ AG VP+ I+++TL+
Sbjct: 172 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMA-MRAAGYVPNVITFSTLI 230
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L + L+ L F M E+G KP+ TYT LI R + ++ LF M Q I
Sbjct: 231 HGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIP 290
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y SLI K G +D A ++ EM+
Sbjct: 291 PDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 322
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 137/273 (50%), Gaps = 4/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I LC +GN A +LL +RDKNI Y+ ++ + + + S+++L++++
Sbjct: 85 NTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMA 144
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + + F +++ + + +V+ + + +I AK ++++
Sbjct: 145 AGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDE 204
Query: 122 ALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+L I + + P++IT++ ++ L R G + L F SM EAG P+ +Y TL
Sbjct: 205 SLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 264
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ- 238
+ L + ++ F +M ++ I PD + Y +LI + + G+++E+ +L+ +M
Sbjct: 265 IAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG 324
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++P+I + +LID K+GK+ A + EM +
Sbjct: 325 LQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 126/272 (46%), Gaps = 6/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L KAG ++ A+ + ++++ ++ +P+ YN ++ + + + + + +
Sbjct: 17 VQSLAKAGMLAQALEVFETMKSESC-VPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75
Query: 64 RTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
R Y + + + E+ ++ + II + K + E++
Sbjct: 76 RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + + C PD+ +N V+ R + + M E+G PD +SY+ L++
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195
Query: 183 LRKIRRLDLCLIYFREMG--ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L KI +LD L EM +G P+++T++ LI RTG +E++L +F M + +
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ Y Y +LI L + KV A +FE+M +
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQA 287
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 128/269 (47%), Gaps = 10/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI-FLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
I L K G + ++++L + + ++PN ++ ++ T +++ + ++ +L +
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ YT + Q E++ Q P + N +I + K +++A
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312
Query: 123 LLIFDHIKG-LKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ + G +P ++T+N ++D LG++GR N+++ A M G+ D +Y
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELV---AEMGTKGLAADTCTYRI 369
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ L + +LD L +++M E D ++ + + +TGNI+++ +F ++
Sbjct: 370 LIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSG 429
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
P+ +R L ++L K+G+V+ A + E
Sbjct: 430 AVPNPETFRILSESLIKLGRVEDAQKLME 458
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 36/197 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-EA 167
++ + AK+ + +AL +F+ +K C P L+TYN++++ G L+ F SMK E
Sbjct: 16 VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75
Query: 168 GVVPDFISYNTLLNN-------------LRKIRRLDLCLIYF------------------ 196
V PD +YNTL++ L ++R ++ F
Sbjct: 76 RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135
Query: 197 ----REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
EM +G PD+ + ++ F R+ N+E++ ++ M + +P Y LI
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195
Query: 253 LKKMGKVDLAMTIFEEM 269
L K+GK+D ++ I EM
Sbjct: 196 LAKIGKLDESLKILSEM 212
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
KC Y+ V+ L + G + L F +MK VP ++YN L+N+
Sbjct: 5 KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKA 64
Query: 193 LIYFREMG-ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
L F+ M E ++PD TY LI +GN E + +L ++M+ + I +++ Y S+I
Sbjct: 65 LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIK 124
Query: 252 NLKKMGKVDLAMTIFEEM 269
+L K K + + + EEM
Sbjct: 125 SLVKEAKPEESYKVLEEM 142
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 144/272 (52%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ C+ G V A+++ ++ + +P+ YN +L E +D + ++++ +
Sbjct: 228 NALIDGFCRMGRVDKAMKI-KAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETME 286
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + F + + + + E +Q ++ N +I AF K+R+
Sbjct: 287 RSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTR 346
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGR---VNDMLNEFASMKEAGVVPDFISYN 177
K +F+ + G +PD++T+NI++D R G V +L+E M+ V+PD I Y
Sbjct: 347 KGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR---VLPDCIFYT 403
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++++L K ++D+ FR+M E+G+ PD+++Y AL++ F +T + +++ LF++M+ +
Sbjct: 404 AVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSK 463
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P Y+ ++ L + K+ LA ++++M
Sbjct: 464 GLYPDEVTYKLIVGGLIRGKKISLACRVWDQM 495
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 46/308 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N Y+ LC+ + A+ L S+ RD ++ +Y ++ A D + ++ +
Sbjct: 123 NTYLNLLCRQNRLETALELFHSMPSKGRDPDVV---SYTIIIDALCNAKRFDEAAKVWRR 179
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF--IEEVVQIASPESIIVVNRIIFAFAKS 116
L+ + LS D A + L + + V++ + +V N +I F +
Sbjct: 180 LI--DKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRM 237
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++KA+ I + C PDL+TYNI+L+ G V++ + +M+ +GV PD SY
Sbjct: 238 GRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSY 297
Query: 177 NTLLNNLRKIRRLD--------------LCLIY---------------------FREMGE 201
N LL K +D +C + F EM
Sbjct: 298 NELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCG 357
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
GI+PD++T+ LID+F R G+ +L ++M + ++ P Y +++D+L K GKVD+
Sbjct: 358 KGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDV 417
Query: 262 AMTIFEEM 269
A ++F +M
Sbjct: 418 AHSVFRDM 425
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 123/273 (45%), Gaps = 7/273 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVS-S 63
I KL KAG ++ A+ L + + N + + YN + + + L+ + ++
Sbjct: 17 ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRG 76
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS----PESIIVVNRIIFAFAKSRQI 119
+L Y+ F A + L + ++ + S P+ I N + + ++
Sbjct: 77 FSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPD-IWAFNTYLNLLCRQNRL 135
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E AL +F + PD+++Y I++D L R ++ + + + G+ PD+ + L
Sbjct: 136 ETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVAL 195
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L R+DL + + G+K + L Y ALID F R G +++++++ M +
Sbjct: 196 VVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGC 255
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y L++ + G VD A+ + E M S
Sbjct: 256 VPDLVTYNILLNYCCEEGMVDEAVRLVETMERS 288
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 131/263 (49%), Gaps = 3/263 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+AG+ AA+ L+ S+ K + P YN VL + D ++++ K++
Sbjct: 203 RAGDAEAAMALVDSMVSKGL-KPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 261
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
+T F + + L +E+ ++ + +I FA+ +++ A+
Sbjct: 262 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 321
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
++ PD + Y +V+ R G ++D L M G +PD ++YNTLLN L K RR
Sbjct: 322 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 381
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L EM E G+ PDL T+T LI + G ++++L+LF+ M Q++RP I Y +
Sbjct: 382 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 441
Query: 249 LIDNLKKMGKVDLAMTIFEEMNS 271
LID + + G +D A ++++M+S
Sbjct: 442 LIDGMCRQGDLDKANDLWDDMHS 464
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC++G A + + + D + P+ ++ ++ +I+ + +I K++
Sbjct: 230 NSVLKGLCRSGMWDKAWEVFKEMDDFGV-APDVRSFTILIGGFCRVGEIEEALKIYKEMR 288
Query: 61 ---VSSRTLSSDCYTN-FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ +S C FAR M + ++ E+ ++ +I F ++
Sbjct: 289 HRGIKPDLVSFSCLIGLFARRGKMD----HAMAYLREMRCFGLVPDGVIYTMVIGGFCRA 344
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ AL + D + G C PD++TYN +L+ L + R+ D M+E GV PD ++
Sbjct: 345 GLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 404
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TL++ +LD L F M ++PD++TY LID R G+++++ L++DM
Sbjct: 405 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 464
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++I P+ Y LID+ + G+V+ A +EM
Sbjct: 465 REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 497
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 88/165 (53%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+N ++ + K+ + +K + ++ PD++T+N+++D R G + SM
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
G+ P ++YN++L L + D F+EM + G+ PD+ ++T LI F R G I
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE+L+++ +M+ + I+P + + LI + GK+D AM EM
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL---- 59
I C+ G + A+++ + +R + I P+ +++C++ A +D + L+++
Sbjct: 268 IGGFCRVGEIEEALKIYKEMRHRGI-KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
LV + + F RA +M+D L +E+V ++ N ++ K R++
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSD----ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A + + ++ PDL T+ ++ G+++ L F +M + PD ++YNTL
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 442
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ + + LD + +M I P+ +TY+ LIDS G +E++ ++M + I
Sbjct: 443 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 502
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+I Y S+I + G V ++M
Sbjct: 503 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 532
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 15/251 (5%)
Query: 34 NAYNCVLVASAETNDIDLSFQILK----------DLLVSS---RTLSSDCYTN--FARAF 78
+AY V +++E N L+ + D ++S R + D T+ A
Sbjct: 142 DAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDAR 201
Query: 79 IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDL 138
D + ++ +V I+ N ++ +S +KA +F + PD+
Sbjct: 202 FRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 261
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
++ I++ RVG + + L + M+ G+ PD +S++ L+ + ++D + Y RE
Sbjct: 262 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 321
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M G+ PD + YT +I F R G + ++LR+ ++M P + Y +L++ L K +
Sbjct: 322 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 381
Query: 259 VDLAMTIFEEM 269
+ A + EM
Sbjct: 382 LLDAEGLLNEM 392
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 15/244 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C G + A++L ++ ++ + P+ YN ++ D+D + + D+
Sbjct: 408 IHGYCIEGKLDKALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWDDMH--- 463
Query: 64 RTLSSDCYTNFARAFIMTD-DCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSR 117
S + + N I+ D C + + F++E++ +I+ N II + +S
Sbjct: 464 ---SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 520
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ K + K PDLITYN ++ + +++D M++ V PD ++YN
Sbjct: 521 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYN 580
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + F +M GI+PD TY ++I+ GN +E+ +L ++M Q+
Sbjct: 581 MLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 640
Query: 238 QIRP 241
P
Sbjct: 641 GFAP 644
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + + Q+E A D + P+++TYN ++ R G V+ M
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V PD I+YNTL++ K ++ M + ++PD++TY LI+ F GN++E+
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 596
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F M + I P Y Y S+I+ G A + +EM
Sbjct: 597 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 637
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ N +++N K D EM + + PD++T+ ++D+ R G+ E ++ L + M
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ ++P I Y S++ L + G D A +F+EM+
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C+ G V A L + +K I LPN YN ++ + ++ + L+ ++V+
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGI-LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 64 RTLSSDCYTNFARAFIMTD---DCTQLLIFIE-EVVQIASPESIIVVNRIIFAFAKSRQI 119
+ Y +I D D +LL +E E VQ ++ N +I F+ +
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ----PDVVTYNMLINGFSVHGNV 592
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
++A IF+ + +PD TY +++ G + M + G PD
Sbjct: 593 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 136/283 (48%), Gaps = 20/283 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N IE LC G V A +L +K + Y+ ++ E N ++ +F +L L
Sbjct: 503 NMIIEGLCIGGKVDDAQAFFDNLEEKCL---ENYSAMVNGYCEANHVNKAFALLIRLSKQ 559
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
R L + D + L +E +V + ++I+ +++I A ++ ++EKA
Sbjct: 560 GRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKA 619
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F+ + PD+ITY I+++ R+ ++ + + MK G+ PD I+Y LLNN
Sbjct: 620 QYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNN 679
Query: 183 LRKI----------------RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
KI +D ++ EM + IKPD++ YT LID +T NI++
Sbjct: 680 CSKIDLRSSSSSLDAMKSKENMMDPSALW-SEMKDMDIKPDVICYTVLIDKHCKTNNIQD 738
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ LFN+M + + P Y +L+ +G + A+ +F+EM
Sbjct: 739 AINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEM 781
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 7/269 (2%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+IE LC G ++LQ + + I + AY V+ + + IL+++
Sbjct: 260 FIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM--EK 317
Query: 64 RTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + D Y A + M + + L +E+V + ++++ I+ ++ +
Sbjct: 318 QGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASE 377
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
F K + D YN+V+D L ++G+V + + MK +VPD I+Y T+++
Sbjct: 378 VANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVIS 437
Query: 182 N-LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K + +D IY REM + G KPD++TY L F R G +E+L L N M+ Q ++
Sbjct: 438 GYFLKGKVVDALNIY-REMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVK 496
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + +I+ L GKVD A F+ +
Sbjct: 497 PDTVTHNMIIEGLCIGGKVDDAQAFFDNL 525
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+P+ I+ N ++ +SR+++ A+ I+ +K P+ TY I + R G + + +
Sbjct: 181 APQ-ILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAI 239
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ F M+E+GV P+ SY T + L R DL +++ + I D+ YT +I F
Sbjct: 240 DVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGF 299
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++E+ + +M++Q P +YVY +LI +G + A+ + +EM S
Sbjct: 300 CSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVS 352
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 60/105 (57%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K G P +S N L+N L + R++D+ + +R++ G+ P+ TYT I F R GN+
Sbjct: 176 KHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNL 235
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E++ +F DM++ + P+ + Y + I+ L G+ DL + +++
Sbjct: 236 AEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDV 280
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 34/232 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I C GN+ A+ L + K + NCV+++S IL+ L S
Sbjct: 331 ISGYCMVGNLLKALALHDEMVSKGV----KTNCVILSS-----------ILQGL--SQMG 373
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
++S+ F + ++ IF +E N ++ A K ++E+A+ +
Sbjct: 374 MASEVANQF-------KEFKKMGIFFDEAC----------YNVVMDALCKLGKVEEAVEL 416
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+KG K PD+I Y V+ G+V D LN + MK+ G PD ++YN L +
Sbjct: 417 LVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSR 476
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L M G+KPD +T+ +I+ G ++++ F++++++
Sbjct: 477 NGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEK 528
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 126/298 (42%), Gaps = 36/298 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ L + G S + + IF A YN V+ A + ++ + ++L ++ +
Sbjct: 366 LQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEM--KGK 423
Query: 65 TLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ D YT + + L E+ I I+ N + F+++ ++A
Sbjct: 424 KMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEA 483
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE------AGVVPDFISY 176
L + ++++ KPD +T+N++++ L G+V+D F +++E + +V +
Sbjct: 484 LSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEA 543
Query: 177 N------TLLNNLRKIRRL-----------DLC--------LIYFREMGESGIKPDLLTY 211
N LL L K R+ +LC L M I P ++ Y
Sbjct: 544 NHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMY 603
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +I + + G +E++ +FN + + + P + Y +I+ +M K+ A + +M
Sbjct: 604 SKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDM 661
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I S ++A + K P +++ N +++ L +V+ + + +
Sbjct: 151 VSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQL 210
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K G+ P+ +Y + + L + FR+M ESG+ P+ +YT I+ G
Sbjct: 211 KAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRS 270
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ D+ +I ++ Y +I K+ A +I EM
Sbjct: 271 DLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM 315
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 131/263 (49%), Gaps = 3/263 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+AG+ AA+ L+ S+ K + P YN VL + D ++++ K++
Sbjct: 142 RAGDAEAAMALVDSMVSKGL-KPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 200
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
+T F + + L +E+ ++ + +I FA+ +++ A+
Sbjct: 201 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 260
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
++ PD + Y +V+ R G ++D L M G +PD ++YNTLLN L K RR
Sbjct: 261 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 320
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L EM E G+ PDL T+T LI + G ++++L+LF+ M Q++RP I Y +
Sbjct: 321 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 380
Query: 249 LIDNLKKMGKVDLAMTIFEEMNS 271
LID + + G +D A ++++M+S
Sbjct: 381 LIDGMCRQGDLDKANDLWDDMHS 403
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC++G A + + + D + P+ ++ ++ +I+ + +I K++
Sbjct: 169 NSVLKGLCRSGMWDKAWEVFKEMDDFGV-APDVRSFTILIGGFCRVGEIEEALKIYKEMR 227
Query: 61 ---VSSRTLSSDCYTN-FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ +S C FAR M + ++ E+ ++ +I F ++
Sbjct: 228 HRGIKPDLVSFSCLIGLFARRGKMD----HAMAYLREMRCFGLVPDGVIYTMVIGGFCRA 283
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ AL + D + G C PD++TYN +L+ L + R+ D M+E GV PD ++
Sbjct: 284 GLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 343
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TL++ +LD L F M ++PD++TY LID R G+++++ L++DM
Sbjct: 344 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 403
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++I P+ Y LID+ + G+V+ A +EM
Sbjct: 404 REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 436
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 88/165 (53%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+N ++ + K+ + +K + ++ PD++T+N+++D R G + SM
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
G+ P ++YN++L L + D F+EM + G+ PD+ ++T LI F R G I
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE+L+++ +M+ + I+P + + LI + GK+D AM EM
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL---- 59
I C+ G + A+++ + +R + I P+ +++C++ A +D + L+++
Sbjct: 207 IGGFCRVGEIEEALKIYKEMRHRGI-KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
LV + + F RA +M+D L +E+V ++ N ++ K R++
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSD----ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A + + ++ PDL T+ ++ G+++ L F +M + PD ++YNTL
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ + + LD + +M I P+ +TY+ LIDS G +E++ ++M + I
Sbjct: 382 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 441
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+I Y S+I + G V ++M
Sbjct: 442 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 471
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + + Q+E A D + P+++TYN ++ R G V+ M
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V PD I+YNTL++ K ++ M + ++PD++TY LI+ F GN++E+
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 535
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F M + I P Y Y S+I+ G A + +EM
Sbjct: 536 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C G + A++L ++ ++ + P+ YN ++ D+D + + D+
Sbjct: 347 IHGYCIEGKLDKALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWDDMH--- 402
Query: 64 RTLSSDCYTNFARAFIMTD-DCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSR 117
S + + N I+ D C + + F++E++ +I+ N II + +S
Sbjct: 403 ---SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 459
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ K + K PDLITYN ++ + +++D M++ V PD ++YN
Sbjct: 460 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYN 519
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + F +M GI+PD TY ++I+ GN +E+ +L ++M Q+
Sbjct: 520 MLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 579
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ N +++N K D EM + + PD++T+ ++D+ R G+ E ++ L + M
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ ++P I Y S++ L + G D A +F+EM+
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 192
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 36/265 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
++ LCK+G+ S A N+F C + S E D D +L+ L + +T
Sbjct: 307 VKSLCKSGHASEA---------HNVF------CRMWNSHEKGDRDAFVSMLEVLCNAEKT 351
Query: 66 LSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
L + D I+TD + + N + A K +Q+
Sbjct: 352 LEAIDLLHMMPEKGIVTD--------------------VGMYNMVFSALGKLKQVSFISN 391
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD +K PD+ TYNI++ GRVG V+ F M+ + PD ++YN+L+N L
Sbjct: 392 LFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLG 451
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K LD + F+EM E G PD+ TY+ LI+ FG++ +E + LF++M + P+I
Sbjct: 452 KHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIV 511
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L++ GK + A ++E M
Sbjct: 512 TYNILLDCLERRGKTEEAHKLYETM 536
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 137/338 (40%), Gaps = 68/338 (20%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ ++ VS ++ + +R K L AYN +L A A+ +D +FQ+ +D+
Sbjct: 135 VQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHC 194
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT R ++ L F +E+V ++I N II A K++ ++K +
Sbjct: 195 VPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIF 254
Query: 125 IFDHIKGLKCKPDLITY----------------NIVLDILGRV----------------G 152
+ + C+P+ TY N VLDI R G
Sbjct: 255 VLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSG 314
Query: 153 RVNDMLNEFASM-----------------------------------KEAGVVPDFISYN 177
++ N F M E G+V D YN
Sbjct: 315 HASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYN 374
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+ + L K++++ F +M +GI PD+ TY +I S+GR G ++++ LF M+
Sbjct: 375 MVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEAS 434
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+P + Y SLI+ L K G +D A +F+EM D
Sbjct: 435 SCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYD 472
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 83/135 (61%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D+ YN+V LG++ +V+ + N F MK G++PD +YN ++++ ++ +D F
Sbjct: 369 DVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELF 428
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M S KPD++TY +LI+ G+ G+++E+ LF +M+++ P ++ Y LI+ K
Sbjct: 429 EVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKS 488
Query: 257 GKVDLAMTIFEEMNS 271
KV++A ++F+EM S
Sbjct: 489 NKVEMACSLFDEMIS 503
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
LS Y +A + + + ++ EE+ + I N ++ A AK+ +++A +
Sbjct: 126 LSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQV 185
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F+ +K C PD TY I++ + G+ GR + L+ F M G V + I++NT++ L K
Sbjct: 186 FEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGK 245
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ +D + +M E+ +P+ TY+ +D G + L D+ + + SIY
Sbjct: 246 NKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHR-LNEVLDICSRFMNRSIYS 304
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y L+ +L K G A +F M +S
Sbjct: 305 Y--LVKSLCKSGHASEAHNVFCRMWNS 329
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 135 KPDLITYNIVLDILGRV-GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
+ D +YN +L +L R ++ L A M+ GV + + N L+ ++ CL
Sbjct: 57 RHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEMERCL 116
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+ G++ TY ++ + R+ + + +++ +M+++ + I+ Y L+D L
Sbjct: 117 ---ELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDAL 173
Query: 254 KKMGKVDLAMTIFEEM 269
K G VD A +FE+M
Sbjct: 174 AKAGMVDQAFQVFEDM 189
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 36/265 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
++ LCK+G+ S A N+F C + S E D D +L+ L + +T
Sbjct: 307 VKSLCKSGHASEA---------HNVF------CRMWNSHEKGDRDAFVSMLEVLCNAEKT 351
Query: 66 LSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
L + D I+TD + + N + A K +Q+
Sbjct: 352 LEAIDLLHMMPEKGIVTD--------------------VGMYNMVFSALGKLKQVSFISN 391
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD +K PD+ TYNI++ GRVG V+ F M+ + PD ++YN+L+N L
Sbjct: 392 LFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLG 451
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K LD + F+EM E G PD+ TY+ LI+ FG++ +E + LF++M + P+I
Sbjct: 452 KHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIV 511
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L++ GK + A ++E M
Sbjct: 512 TYNILLDCLERRGKTEEAHKLYETM 536
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 139/341 (40%), Gaps = 74/341 (21%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
++ ++ VS ++ + +R K +IF AYN +L A A+ +D +FQ+ +D+
Sbjct: 135 VQAHLRSREVSKGFQVYEEMRRKGYKLDIF---AYNMLLDALAKAGMVDQAFQVFEDMKQ 191
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT R ++ L F +E+V ++I N II A K++ ++K
Sbjct: 192 KHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDK 251
Query: 122 ALLIFDHIKGLKCKPDLITY----------------NIVLDILGRV-------------- 151
+ + + C+P+ TY N VLDI R
Sbjct: 252 VIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLC 311
Query: 152 --GRVNDMLNEFASM-----------------------------------KEAGVVPDFI 174
G ++ N F M E G+V D
Sbjct: 312 KSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVG 371
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
YN + + L K++++ F +M +GI PD+ TY +I S+GR G ++++ LF M
Sbjct: 372 MYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM 431
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ +P + Y SLI+ L K G +D A +F+EM D
Sbjct: 432 EASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYD 472
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 83/135 (61%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D+ YN+V LG++ +V+ + N F MK G++PD +YN ++++ ++ +D F
Sbjct: 369 DVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELF 428
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M S KPD++TY +LI+ G+ G+++E+ LF +M+++ P ++ Y LI+ K
Sbjct: 429 EVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKS 488
Query: 257 GKVDLAMTIFEEMNS 271
KV++A ++F+EM S
Sbjct: 489 NKVEMACSLFDEMIS 503
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
LS Y +A + + + ++ EE+ + I N ++ A AK+ +++A +
Sbjct: 126 LSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQV 185
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F+ +K C PD TY I++ + G+ GR + L+ F M G V + I++NT++ L K
Sbjct: 186 FEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGK 245
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ +D + +M E+ +P+ TY+ +D G + L D+ + + SIY
Sbjct: 246 NKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHR-LNEVLDICSRFMNRSIYS 304
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y L+ +L K G A +F M +S
Sbjct: 305 Y--LVKSLCKSGHASEAHNVFCRMWNS 329
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 135 KPDLITYNIVLDILGRV-GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
+ D +YN +L +L R ++ L A M+ GV + + N L+ ++ CL
Sbjct: 57 RHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEVERCL 116
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+ G++ TY ++ + R+ + + +++ +M+++ + I+ Y L+D L
Sbjct: 117 ---ELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDAL 173
Query: 254 KKMGKVDLAMTIFEEM 269
K G VD A +FE+M
Sbjct: 174 AKAGMVDQAFQVFEDM 189
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 36/265 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
++ LCK+G+ S A N+F C + S E D D +L+ L + +T
Sbjct: 365 VKSLCKSGHASEA---------HNVF------CRMWNSHEKGDRDAFVSMLEVLCNAEKT 409
Query: 66 LSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
L + D I+TD + + N + A K +Q+
Sbjct: 410 LEAIDLLHMMPEKGIVTD--------------------VGMYNMVFSALGKLKQVSFISN 449
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD +K PD+ TYNI++ GRVG V+ F M+ + PD ++YN+L+N L
Sbjct: 450 LFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLG 509
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K LD + F+EM E G PD+ TY+ LI+ FG++ +E + LF++M + P+I
Sbjct: 510 KHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIV 569
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L++ GK + A ++E M
Sbjct: 570 TYNILLDCLERRGKTEEAHKLYETM 594
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 139/341 (40%), Gaps = 74/341 (21%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
++ ++ VS ++ + +R K +IF AYN +L A A+ +D +FQ+ +D+
Sbjct: 193 VQAHLRSREVSKGFQVYEEMRRKGYKLDIF---AYNMLLDALAKAGMVDQAFQVFEDMKQ 249
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT R ++ L F +E+V ++I N II A K++ ++K
Sbjct: 250 KHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDK 309
Query: 122 ALLIFDHIKGLKCKPDLITY----------------NIVLDILGRV-------------- 151
+ + + C+P+ TY N VLDI R
Sbjct: 310 VIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLC 369
Query: 152 --GRVNDMLNEFASM-----------------------------------KEAGVVPDFI 174
G ++ N F M E G+V D
Sbjct: 370 KSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVG 429
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
YN + + L K++++ F +M +GI PD+ TY +I S+GR G ++++ LF M
Sbjct: 430 MYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM 489
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ +P + Y SLI+ L K G +D A +F+EM D
Sbjct: 490 EASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYD 530
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 83/135 (61%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D+ YN+V LG++ +V+ + N F MK G++PD +YN ++++ ++ +D F
Sbjct: 427 DVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELF 486
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M S KPD++TY +LI+ G+ G+++E+ LF +M+++ P ++ Y LI+ K
Sbjct: 487 EVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKS 546
Query: 257 GKVDLAMTIFEEMNS 271
KV++A ++F+EM S
Sbjct: 547 NKVEMACSLFDEMIS 561
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
LS Y +A + + + ++ EE+ + I N ++ A AK+ +++A +
Sbjct: 184 LSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQV 243
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F+ +K C PD TY I++ + G+ GR + L+ F M G V + I++NT++ L K
Sbjct: 244 FEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGK 303
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ +D + +M E+ +P+ TY+ +D G + L D+ + + SIY
Sbjct: 304 NKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHR-LNEVLDICSRFMNRSIYS 362
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y L+ +L K G A +F M +S
Sbjct: 363 Y--LVKSLCKSGHASEAHNVFCRMWNS 387
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 135 KPDLITYNIVLDILGRV-GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
+ D +YN +L +L R ++ L A M+ GV + + N L+ ++ CL
Sbjct: 115 RHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEMERCL 174
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+ G++ TY ++ + R+ + + +++ +M+++ + I+ Y L+D L
Sbjct: 175 ---ELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDAL 231
Query: 254 KKMGKVDLAMTIFEEM 269
K G VD A +FE+M
Sbjct: 232 AKAGMVDQAFQVFEDM 247
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 90/155 (58%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K +IE A +FD + CKP+ YNI+L+ G + F +M + G+ PD
Sbjct: 893 KDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIK 952
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SY L+ L RL+ L YFR++ E G++PDL+TY LI GR+G +EE++ LFNDM
Sbjct: 953 SYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDM 1012
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ I P++Y Y SLI L K GK A ++EE+
Sbjct: 1013 EKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEEL 1047
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 124/265 (46%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LC+ G V A + ++ K I +YN ++ + + ++ + ++ + +
Sbjct: 363 VDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGP 422
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
T + Y F + + + + + E + ++ N ++++ AKS ++ A
Sbjct: 423 TPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKR 482
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F +K + PD ITY +++ + ++ + F+ M E VPD ++ N+L++ L
Sbjct: 483 VFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLY 542
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K R + F E+ E + P TY L+ GR G ++E + L +M P++
Sbjct: 543 KAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLI 602
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +++D L K G+V+ A+ + M
Sbjct: 603 TYNTVLDCLCKNGEVNYALGMLYNM 627
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 94/180 (52%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E++ + + N ++ + + EK +F ++ PD+ +Y +++ L
Sbjct: 903 LFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALC 962
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
GR+ND L+ F + E G+ PD I+YN L++ L + RL+ + F +M +SGI P+L
Sbjct: 963 TAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLY 1022
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +LI G+ G E+ +++ ++ + +P+++ Y +LI G D A + +M
Sbjct: 1023 TYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQM 1082
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEE 93
AY V+ A + +D + + + Y + F+ D L +F
Sbjct: 358 AYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHM 417
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ +P V I + + KS + KA+ ++ +K PD++ N VL L + GR
Sbjct: 418 NIHGPTPNGYTYVLFINY-YGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGR 476
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ F +K GV PD I+Y ++ K D + F EM E+ PD+L +
Sbjct: 477 LGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNS 536
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LID+ + G E+ ++F+++K+ + P+ Y +L+ L + GKV M + EEMNS+
Sbjct: 537 LIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSN 595
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I I+ A +F +K L C PD TYN++LD +G+ R+ DML M
Sbjct: 780 NALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHC 839
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCL-IYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
G +++YNT+++ L K + L + +Y++ M E G P TY L+D + G IE
Sbjct: 840 KGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSE-GFSPTPCTYGPLLDGLLKDGKIE 898
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ LF++M +P+ +Y L++ + G + +F+ M
Sbjct: 899 DAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNM 942
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 124/266 (46%), Gaps = 15/266 (5%)
Query: 14 NVSAAVRLLQSLRDKNIFLPNAYN---CVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
+V V LL+ + D + PN Y+ C+ V + + +++IL+ + D
Sbjct: 231 DVETVVWLLREMEDHGV-KPNVYSYTICIRVL-GQAGRFEEAYKILQKM--EDEGCKPDV 286
Query: 71 YTNFARAFIMTD-----DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
TN I+ D D +F + P+ + + ++ + + I
Sbjct: 287 VTNTVLIQILCDAGRVSDAKD--VFWKMKASDQKPDRVTYIT-LLDKCGDNGDSRSVIEI 343
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ +K +++ Y V+D L +VGRV++ + F MK+ G+ P SYN+L++ K
Sbjct: 344 WNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLK 403
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
RL+ L F M G P+ TY I+ +G++G ++++ + MK + I P +
Sbjct: 404 ADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVA 463
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ +L K G++ +A +F E+ S
Sbjct: 464 GNAVLYSLAKSGRLGMAKRVFHELKS 489
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
Query: 93 EVVQIASPESIIVVNR----IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
EV ++ + + I+ R ++ AF K R +E + + ++ KP++ +Y I + +L
Sbjct: 203 EVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICIRVL 261
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G+ GR + M++ G PD ++ L+ L R+ F +M S KPD
Sbjct: 262 GQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDR 321
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY L+D G G+ + ++N MK ++ Y +++D L ++G+VD A +F++
Sbjct: 322 VTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQ 381
Query: 269 M 269
M
Sbjct: 382 M 382
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 124/273 (45%), Gaps = 9/273 (3%)
Query: 3 NGY-----IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQI 55
NGY I K+G A++ + ++ K I +P+ A N VL + A++ + ++ ++
Sbjct: 425 NGYTYVLFINYYGKSGESLKAIKRYELMKSKGI-VPDVVAGNAVLYSLAKSGRLGMAKRV 483
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+L + YT + + + + E+++ ++ VN +I K
Sbjct: 484 FHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYK 543
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ + +A IF +K + P TYN +L LGR G+V ++++ M P+ I+
Sbjct: 544 AGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLIT 603
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNT+L+ L K ++ L M G PDL +Y + + + E+ R+F MK
Sbjct: 604 YNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK 663
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ + P +++ + K G ++ A+ +E
Sbjct: 664 -KVLAPDYTTLCTILPSFVKNGLMNEALHTLKE 695
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A + ++ +L F + L +PDLITYN+++ LGR GR+ + ++ F M+++G
Sbjct: 957 LIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG 1016
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P+ +YN+L+ L K + + E+ ++G KP++ TY ALI + +G+ + +
Sbjct: 1017 IAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAF 1076
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNL 253
+ M P+ Y L + L
Sbjct: 1077 ASYGQMIVGGCPPNSSTYMQLPNQL 1101
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 8/244 (3%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA----RAFIMTDDCTQLL 88
P A N V + + D + Q+ K + R + + N+ RA D Q+
Sbjct: 76 PGAQNVVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVF 135
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
++ + A+ + + + R + R AL + +K + TYN ++ L
Sbjct: 136 DLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPM---MKEAGIVLNSYTYNGLIYFL 192
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G + + + M G+VP +Y+ L+ K R ++ + REM + G+KP++
Sbjct: 193 VKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNV 251
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+YT I G+ G EE+ ++ M+ + +P + LI L G+V A +F +
Sbjct: 252 YSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWK 311
Query: 269 MNSS 272
M +S
Sbjct: 312 MKAS 315
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 62/144 (43%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT A L + ++ ++ +I N +I +S ++E+A+ +F+ ++
Sbjct: 954 YTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDME 1013
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P+L TYN ++ LG+ G+ + + + + G P+ +YN L+ D
Sbjct: 1014 KSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTD 1073
Query: 191 LCLIYFREMGESGIKPDLLTYTAL 214
+ +M G P+ TY L
Sbjct: 1074 NAFASYGQMIVGGCPPNSSTYMQL 1097
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 61/338 (18%), Positives = 121/338 (35%), Gaps = 71/338 (21%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + L K+G + A R+ L+ + N Y ++ ++ ++ D + ++ +++
Sbjct: 465 NAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIE 524
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + + E+ ++ + N ++ + ++++
Sbjct: 525 TRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKE 584
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ + + + P+LITYN VLD L + G VN L +M G +PD SYNT L+
Sbjct: 585 VMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALH 644
Query: 182 NLRKIRRLD-------------------LCLIY--FREMG--------------ESGIKP 206
L K RL LC I F + G + G K
Sbjct: 645 GLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKA 704
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK-------- 258
D ++ +L++ + +E+S+ ++ +I + LI +L K K
Sbjct: 705 DRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELV 764
Query: 259 ---------------------------VDLAMTIFEEM 269
+D+A +F EM
Sbjct: 765 KKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEM 802
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK G +S+AVRLL+ + K F PN Y VL + + D + +L+++
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKG-FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 411
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
TL+S Y A + + I+E+ I N II+ + Q+E+A
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAE 471
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+++ + ITYN ++ L R GR D + M G D +SYN L+ +
Sbjct: 472 HMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAM 531
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +D L+ EM E GIKP+ ++Y LI + + ++L L M Q + P I
Sbjct: 532 CKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDI 591
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LI+ L KMG + A+ + E++++
Sbjct: 592 VTYNTLINGLCKMGWMHAALNLLEKLHN 619
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I LCK G + A+ L+Q +R + P+ +YN ++ ++ + + ++LL
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCN-PDICSYNTIIYHLCNNEQMEEAEHMFENLL 478
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y A + + +E++ ++ N +I A K ++
Sbjct: 479 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 538
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++L++ + + KP+ ++YNI++ L + RV D L M G+ PD ++YNTL+
Sbjct: 539 RSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 598
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
N L K+ + L ++ + PD++TY LI + ++++ L N
Sbjct: 599 NGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLN 650
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 124/265 (46%), Gaps = 7/265 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC+ G + A+ LL+ + ++ +P+A Y V+ A + + + +L ++L+
Sbjct: 185 LCRLGRANEALALLRGMA-RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ + + R + ++ ++ ++ ++ + RQ ++A +
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ L +++ +N V+ G++ + + +M G PD +Y+ L++ L K+
Sbjct: 304 GRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+ + REM + G P+++TYT ++ SF + G +++ L +M + + + Y
Sbjct: 360 GRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+I L K G++D AM + +EM S
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRS 444
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ K +I A+ + ++ P+++TY IVL + G +D M G
Sbjct: 352 LMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 411
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ + YN ++ L K R+D + +EM G PD+ +Y +I +EE+
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAE 471
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F ++ ++ + + Y ++I L + G+ A+ + +EM
Sbjct: 472 HMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 2/151 (1%)
Query: 121 KALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM-KEAGVVPDFISYNT 178
+AL + D + + +P +YN+VL +L R D L + M V P ++
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L ++ R + L R M G PD + Y +I + G + E+ L N+M
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + ++ + +G+V A + + M
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRM 271
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 103/180 (57%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F +++ S+ N +I K +E + +F ++ + PD++TYN ++D G
Sbjct: 276 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 335
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+VG + ++ + F MK+ G VPD I+YN L+N K ++ YF EM +G+KP+++
Sbjct: 336 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 395
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ LID+F + G ++ +++LF DM++ + P+ + Y SLID K G + A + +M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ ++ N +I + K +E+ +F+ +K + C PD+ITYN +++ + ++
Sbjct: 321 SPD-VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 379
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F+ MK G+ P+ ++Y+TL++ K + + F +M +G+ P+ TYT+LID+
Sbjct: 380 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDAN 439
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ GN+ E+ +L NDM Q ++ +I Y +L+D L K G++ A +F M
Sbjct: 440 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CKAGN++ A +LL + + L Y +L + + + ++ + +L
Sbjct: 436 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 495
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + YT +I + + ++++ + +I+ II+ R++E+ L
Sbjct: 496 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + +K + + ++D + G+ +D LN F M++ GV ++Y L++ L
Sbjct: 556 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 615
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++L + YF M G++P++ YT+LID + IE + +LF++M+ + + P I
Sbjct: 616 KAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDIT 675
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +LID K G + A+ + M
Sbjct: 676 AFTALIDGNLKHGNLQEALVLISRMT 701
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 127/275 (46%), Gaps = 11/275 (4%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN + +L K+GN + + I P+ YN ++ + D++ S + L
Sbjct: 257 CNFLLHRLSKSGNGQLVRKFFNDMIGAGI-APSVFTYNVMIDYLCKEGDLENS----RRL 311
Query: 60 LVSSRT--LSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
V R LS D Y + + ++ E+ + II N +I + K
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A F +K KP+++TY+ ++D + G + + F M+ G++P+ +
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y +L++ K L +M ++G+K +++TYTAL+D + G + E+ +F M
Sbjct: 432 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 491
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ I P+ VY +L+ K +++ AM I ++M
Sbjct: 492 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A F ++ + P + N +L L + G + F M AG+ P +YN
Sbjct: 235 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNV 294
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K L+ F +M E G+ PD++TY +LID +G+ G++EE LFN+MK
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 354
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I Y LI+ K K+ A F EM ++
Sbjct: 355 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN 388
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 17/278 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS---FQILK 57
N I+ LCK G++ + RL +R+ + P+ YN ++ + ++ F +K
Sbjct: 293 NVMIDYLCKEGDLENSRRLFVQMREMGL-SPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 351
Query: 58 DLLVSSRTLSSD----CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
D+ ++ + CY F + + + E+ +++ + +I AF
Sbjct: 352 DVGCVPDIITYNGLINCYCKFEKM-------PRAFEYFSEMKNNGLKPNVVTYSTLIDAF 404
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K ++ A+ +F ++ P+ TY ++D + G + + M +AGV +
Sbjct: 405 CKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 464
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++Y LL+ L K R+ FR M + GI P+ YTAL+ + + +E+++++
Sbjct: 465 VTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 524
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + I+P + +Y S+I K++ I EEM S
Sbjct: 525 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 562
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 127/273 (46%), Gaps = 11/273 (4%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
+ +GYI KA + A+++L+ + + NI P+ Y ++ ++ + IL++
Sbjct: 505 LVHGYI----KAERMEDAMKILKQMTECNI-KPDLILYGSIIWGHCSQRKLEETKLILEE 559
Query: 59 LLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ SR +S++ T A+ + L F +E+ + +I+ +I K+
Sbjct: 560 M--KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKA 617
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+E A+ F + L +P++ Y ++D L + + F M+ G+ PD ++
Sbjct: 618 GIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAF 677
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L++ K L L+ M E I+ DL YT+L+ F + G + ++ + FN+M +
Sbjct: 678 TALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIE 737
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I P + L+ K G++D A+ + EM
Sbjct: 738 KGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A K+ + +A + + + K +++TY +LD L + GR+ + F SM + G
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P+ Y L++ K R++ + ++M E IKPDL+ Y ++I +EE+
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 554
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +MK + I + + ++ID K GK A+ F+EM
Sbjct: 555 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 117/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I CK + A +++ N PN Y+ ++ A + + + ++ D+
Sbjct: 363 NGLINCYCKFEKMPRAFEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMR 421
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT+ A + T+ + +++Q +I+ ++ K+ ++
Sbjct: 422 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 481
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + P+ Y ++ + R+ D + M E + PD I Y +++
Sbjct: 482 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 541
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
R+L+ + EM GI + + T +ID++ + G ++L F +M+ +
Sbjct: 542 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 601
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+I Y LID L K G V+LA+ F M S
Sbjct: 602 ATIVTYCVLIDGLCKAGIVELAVDYFCRMLS 632
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ V +I K+ IE A +FD ++ PD+ + ++D + G + + L
Sbjct: 638 NVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLI 697
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M E + D Y +L++ + L +F EM E GI P+ + L+ + +
Sbjct: 698 SRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKR 757
Query: 222 GNIEESLRLFNDMKQ 236
G ++E++ L N+M++
Sbjct: 758 GQLDEAIELKNEMER 772
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G + AA +L+ + +++ +P+ Y ++V +TN +D + ++++ +
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSC-VPDVITYTSLIVGCCQTNALDEARKLMEKMK 189
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T + Y + ++ +EE+V+ N ++ +S + E
Sbjct: 190 ESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYE 249
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I + + KC PD++TYN ++D +V ++++ M P I+Y TL+
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ RL +M ++GI PDL+TY L+D + G +EE+ L M ++
Sbjct: 310 GGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA 369
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y L++ L K+GKVD A + E M
Sbjct: 370 PDVVTYSILVNGLCKLGKVDDARLLLEMM 398
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
C+ + A +L++ +++ + P+ AYN +L + N ++ ++L++++ + R
Sbjct: 173 CQTNALDEARKLMEKMKESGL-TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD 231
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ Y + + +E++++ ++ N ++ F K ++++A + +
Sbjct: 232 TFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLE 291
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ G +C P +ITY ++ R R+ D M +AG+ PD ++YN LL+ L K
Sbjct: 292 DMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAG 351
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+L+ M E PD++TY+ L++ + G ++++ L M ++ +P++ +
Sbjct: 352 KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFN 411
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
++ID K GKVD + E M
Sbjct: 412 TMIDGFCKAGKVDEGHKVLELM 433
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 124/268 (46%), Gaps = 7/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N + LCK + +LL+ + R+ + F +YN V+ E+ + + +IL+
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGREPDTF---SYNTVVACLCESGKYEEAGKILEK 257
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ Y + F + +E++V ++I +I F+++ +
Sbjct: 258 MIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A + + + PDL+TYN +LD L + G++ + M E PD ++Y+
Sbjct: 318 LADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSI 377
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K+ ++D + M E G +P+L+T+ +ID F + G ++E ++ MK+
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS 437
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
P + Y +LID K ++ A I
Sbjct: 438 CTPDVVTYSTLIDGYCKANRMQDAFAIL 465
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ + A +LL + K+ P+A YNC++ + ID + +LK +L S
Sbjct: 99 IHGLCQCQRIDEAYQLLDEMIQKDCH-PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT+ T+ + +E++ + + N ++ K Q+E+
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + +PD +YN V+ L G+ + M E PD ++YN+L++
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K+ ++D +M P ++TYT LI F R + ++ R+ DM + I P +
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDL 337
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L K GK++ A + E M
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVM 363
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 9/253 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CKAG V ++L+ +++ + P+ Y+ ++ + N + +F IL
Sbjct: 411 NTMIDGFCKAGKVDEGHKVLELMKEVSC-TPDVVTYSTLIDGYCKANRMQDAFAILG--- 466
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S S Y++ T + ++ + + P + II + +
Sbjct: 467 ISPDKAS---YSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGD 523
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + C+P+L TY+I+++ L + RV D +N M E G VPD +Y +L+
Sbjct: 524 EALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLI 583
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ KI ++D F+ M +SG +PD L Y LI F ++GN+E+++ + M ++
Sbjct: 584 DGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCN 643
Query: 241 PSIYVYRSLIDNL 253
P Y SL+ +L
Sbjct: 644 PDAATYFSLMRSL 656
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 133/299 (44%), Gaps = 44/299 (14%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+A ++ A R+++ + I P+ YNC+L + ++ + ++L+ ++
Sbjct: 314 RADRLADAYRVMEDMFKAGIS-PDLVTYNCLLDGLCKAGKLEEAHELLEVMV------EK 366
Query: 69 DCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
DC + I+ + +L + +E +++ +++ N +I F K+ ++++
Sbjct: 367 DCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEG 426
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND----------------MLNEFAS--- 163
+ + +K + C PD++TY+ ++D + R+ D ML S
Sbjct: 427 HKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGK 486
Query: 164 ----------MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
M + G P Y ++ L + R D L + M E G +P+L TY+
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LI+ +T +E+++ + + M ++ P + Y SLID K+ K+D A F+ M S
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDS 605
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + ++I++A + D + C PD YN ++ L ++G+++ N M E
Sbjct: 98 LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
VPD I+Y +L+ + LD +M ESG+ PD + Y AL++ + +EE
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L +M + P + Y +++ L + GK + A I E+M
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG-LKCKPDLITYNIVLDILGRVGRVNDM 157
SP+ +I N I+ A+ + +++AL H +G + C P TY I++ L + R+++
Sbjct: 56 SPD-VITHNTILKAYCQIGDLDRAL---SHFRGKMWCSPTAFTYCILIHGLCQCQRIDEA 111
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M + PD YN L+ L K+ ++D + M E PD++TYT+LI
Sbjct: 112 YQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVG 171
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+T ++E+ +L MK+ + P Y +L++ L K +++ + EEM
Sbjct: 172 CCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEM 223
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 21/272 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK G V A LL+ + ++ PN +N ++ + +D ++L+ L+
Sbjct: 379 VNGLCKLGKVDDARLLLEMMLERGC-QPNLVTFNTMIDGFCKAGKVDEGHKVLE--LMKE 435
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + D T + +A M D L I SP+ + ++ +
Sbjct: 436 VSCTPDVVTYSTLIDGYCKANRMQDAFAILGI---------SPDKA-SYSSMLEGLCSTG 485
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++E+A + D + C P Y +++ L V R ++ L M E G P+ +Y+
Sbjct: 486 KVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYS 545
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N L K +R++ + M E G PD+ TYT+LID F + ++ + + F M+
Sbjct: 546 ILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDS 605
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y LI + G V+ A+ + + M
Sbjct: 606 GCEPDKLAYNILISGFCQSGNVEKAIEVMQLM 637
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F E S S +I F+++ + L I + + + PD+IT+N +L
Sbjct: 11 FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC 70
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G ++ L+ F + P +Y L++ L + +R+D EM + PD
Sbjct: 71 QIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAA 128
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI + G I+ + + M ++ P + Y SLI + +D A + E+M
Sbjct: 129 VYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKM 188
Query: 270 NSS 272
S
Sbjct: 189 KES 191
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK G + A LL+S+ K + PN +YN ++ + +++IL+++
Sbjct: 49 NTLIDAYCKMGRIDEAFGLLKSMSSKGM-QPNLISYNVIINGLCREGSMKEAWEILEEMG 107
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y + + Q L+ E+V+ S++ +I + K+R +
Sbjct: 108 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 167
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ FD ++ +P+ TY ++D R G +N+ M E+G P ++YN +
Sbjct: 168 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 227
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + R++ L +EM E G+ PD+++Y+ +I F R G ++ + ++ +M ++ +
Sbjct: 228 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 287
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI L +M ++ A + +EM
Sbjct: 288 PDAVTYSSLIQGLCEMRRLTEACDLSQEM 316
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 60 LVSSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ SR +S + YT R F + + L E+ + +++ N +I A+ K
Sbjct: 1 MIRSR-VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 59
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+I++A + + +P+LI+YN++++ L R G + + M G PD ++YN
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TLLN K L+ EM +G+ P ++TYTALI+S + N+ ++ F+ M+ +
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+RP+ Y +LID + G ++ A I EM S
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES 214
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 7/262 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY CK GN A+ ++ + +N P+ Y ++ + + +++ + + +
Sbjct: 123 NGY----CKEGNFHQAL-VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT F + + E+ + S++ N I ++E
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + PD+++Y+ ++ R G ++ M E GV PD ++Y++L+
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L ++RRL +EM + G+ PD TYT LI+++ G++ ++L L ++M +
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 357
Query: 241 PSIYVYRSLIDNLKKMGKVDLA 262
P Y LI+ L K + A
Sbjct: 358 PDAVTYSVLINGLNKQARTREA 379
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I C + A+ ++Q + +K + P+ +Y+ ++ ++D +FQ+ ++++
Sbjct: 224 NAFIHGHCVLERMEEALGVVQEMVEKGL-APDVVSYSTIISGFCRKGELDRAFQMKQEMV 282
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y++ + T+ +E++ + P +I A+ +
Sbjct: 283 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 342
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL + D + PD +TY+++++ L + R + + VP ++Y+TL+
Sbjct: 343 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N I + + ALI F G + E+ R+F M ++ +
Sbjct: 403 ENCSNI--------------------EFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 442
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P VY +I + G + A +++EM
Sbjct: 443 PGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 144/303 (47%), Gaps = 42/303 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLS---FQILKDLLV 61
I+ LCK A L++ + + L +YN ++ + N ID++ F +K+L
Sbjct: 806 IKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGC 865
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y A + ++L EE+ + + + N II KSR++E+
Sbjct: 866 GPDEFT---YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ 922
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE------------------ 160
A+ ++ ++ P TY +LD L + GR+ D + NE
Sbjct: 923 AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 982
Query: 161 --------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
F M + G+ PD SY +++ L K +L+ L YFR++ E G++P
Sbjct: 983 GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEP 1042
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
DL+TY LID G++ +EE++ LFN+M+++ I P++Y Y SLI +L K GK A ++
Sbjct: 1043 DLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1102
Query: 267 EEM 269
EE+
Sbjct: 1103 EEL 1105
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 8/270 (2%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + +A L +++ I L NAY N ++ ++ + ++ K ++V S
Sbjct: 218 GGLRSAPVALPVMKEAGIVL-NAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRT 276
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ AF D +L + E+ ++ I ++R+ ++A I ++
Sbjct: 277 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEME 336
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
CKPD+IT+ +++ +L GR++D + F MK++ PD ++Y TLL+
Sbjct: 337 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQ 396
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ + M G +++ YTA+ID+ + G + E+L +F++MKQ+ I P Y Y SLI
Sbjct: 397 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 456
Query: 251 DNLKKMGKVDLAMTIFEEMNSSLSDLAGPK 280
K + A+ +F+ M D+ GPK
Sbjct: 457 SGFLKADRFGDALELFKYM-----DIHGPK 481
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+++ + + N ++ + EK +F + PD+ +Y I++D L + G
Sbjct: 964 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1023
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++ND L F + E G+ PD I+YN L++ L K +RL+ + F EM + GI P+L TY
Sbjct: 1024 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1083
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LI G+ G E+ +++ ++ + +P+++ Y +LI G D A + M
Sbjct: 1084 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRM 1140
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ G V A+ + ++ K I +P +YN ++ + + + ++ K + +
Sbjct: 421 IDALCQVGRVFEALEMFDEMKQKGI-VPEQYSYNSLISGFLKADRFGDALELFKYMDIHG 479
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + F + + + + + E + ++ N ++F AKS ++ A
Sbjct: 480 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 539
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K + PD ITY +++ + + ++ + F M E VPD + N+L++ L
Sbjct: 540 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTL 599
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R D F ++ E ++P TY L+ GR G ++E + L +M P++
Sbjct: 600 YKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 659
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +++D L K G V+ A+ + M +
Sbjct: 660 ITYNTILDCLCKNGAVNDALDMLYSMTT 687
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 6/275 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC AG +S A + ++ K+ P+ Y +L A+ + +I +
Sbjct: 351 IQVLCDAGRISDAKDVFWKMK-KSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT A + L +E+ Q N +I F K+ + AL
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ KP+ T+ + ++ G+ G + + MK G+VPD ++ N +L L
Sbjct: 470 ELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 529
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL + F E+ G+ PD +TYT +I + +E++++F DM + P +
Sbjct: 530 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 589
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF---EEMNSSLSD 275
V SLID L K G+ D A IF +EMN +D
Sbjct: 590 LVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTD 624
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 36/305 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR-DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
NG + L K+G A+ + + + D + Y+ ++VA + D++ +L+++
Sbjct: 243 NGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 302
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT R + + E+ +I +I + +I
Sbjct: 303 HGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISD 362
Query: 122 ALLIFDHIKGLKCKPDLITY-----------------------------------NIVLD 146
A +F +K KPD +TY V+D
Sbjct: 363 AKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVID 422
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L +VGRV + L F MK+ G+VP+ SYN+L++ K R L F+ M G KP
Sbjct: 423 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKP 482
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ T+ I+ +G++G ++++ + MK + I P + +++ L K G++ +A +F
Sbjct: 483 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 542
Query: 267 EEMNS 271
E+ +
Sbjct: 543 HELKA 547
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 3 NGYIEKL-----CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS--- 52
NGY L K+G A++ + ++ K I +P+ A N VL A++ + ++
Sbjct: 483 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGI-VPDVVAGNAVLFGLAKSGRLGMAKRV 541
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV------VQIASPESIIVV 106
F LK + VS T++ YT +M C++ F E V ++ ++VV
Sbjct: 542 FHELKAMGVSPDTIT---YT------MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVV 592
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I K+ + ++A IF +K + +P TYN +L LGR G+V ++++ M
Sbjct: 593 NSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 652
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P+ I+YNT+L+ L K ++ L M G PDL +Y +I + E
Sbjct: 653 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 712
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ +F MK+ I P +++ + K+G + A+ I +E
Sbjct: 713 AFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKE 753
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD ++ K ++ T+ + LG G + MKEAG+V + +YN L+ L
Sbjct: 191 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 250
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K L ++ M G+ P + TY+ L+ +FG+ ++E L L +M+ ++P++Y
Sbjct: 251 KSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 310
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y I L + + D A I EM +
Sbjct: 311 SYTICIRVLGQARRFDEAYRILAEMEN 337
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 118/274 (43%), Gaps = 9/274 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQI---LK 57
N ++ LCK G V+ A+ +L S+ K +P+ +YN V+ + + +F I +K
Sbjct: 663 NTILDCLCKNGAVNDALDMLYSMTTKGC-IPDLSSYNTVIYGLVKEERYNEAFSIFCQMK 721
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+L+ +F + +M + L I E +Q S + ++ K
Sbjct: 722 KVLIPDYATLCTILPSFVKIGLMKE---ALHIIKEYFLQPGSKTDRSSCHSLMEGILKKA 778
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
EK++ + I D ++ L + + + K GV SYN
Sbjct: 779 GTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYN 838
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L+ L +D+ F EM E G PD TY L+D+ G++ IEE L++ +M ++
Sbjct: 839 SLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK 898
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ++I L K +++ A+ ++ + S
Sbjct: 899 GYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 932
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + +++++ +I N +I KS+++E+A+ +F+ ++ P+L TYN ++
Sbjct: 1029 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILH 1088
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
LG+ G+ + + + G P+ +YN L+ D + M G P+
Sbjct: 1089 LGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1148
Query: 208 LLT 210
T
Sbjct: 1149 SST 1151
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 4/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK GNV A +LL + K + PN Y+ ++ ++ + ++L+++
Sbjct: 253 NSLVDGFCKRGNVDDARKLLGIMVAKGM-RPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y+ D + + + ++V + II AF KS ++
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG-VVPDFISYNTL 179
+A ++ + PD++TYN V+D L ++G++ + M+E+G V+PD ++Y+T+
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L K L M ++G PD++TYT +ID + G +EE+ L MK+
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y +LI L K KVD A + EEM ++
Sbjct: 492 APNVVTYTTLISGLCKARKVDEAERVMEEMRNA 524
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 140/307 (45%), Gaps = 41/307 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I C AG++ AA+ LL+ ++ F P+A + ++ A A D+D + L+ +
Sbjct: 116 NIVISGFCNAGDLHAALELLEEMKSAG-FAPDAFTHTPIITAMANAGDLDGAMDHLRSMG 174
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT AF + + +EE+ + P +++ N ++ A K +
Sbjct: 175 CDPNVVT---YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVG 231
Query: 121 KA---------------LLIFDHIKGLKCK--------------------PDLITYNIVL 145
A ++ F+ + CK P+++TY+ ++
Sbjct: 232 AAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
D L + + + MK GV PD +Y+ L++ L K +++ R M SG
Sbjct: 292 DGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 351
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD++ Y+++I +F ++G + E+ + +M++Q+ P + Y ++ID L K+GK+ A I
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 411
Query: 266 FEEMNSS 272
E+M S
Sbjct: 412 LEQMQES 418
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 138/309 (44%), Gaps = 41/309 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK+ A +L+ ++ + + P+A Y+ ++ + + I+ + Q+L+ + S
Sbjct: 291 IDGLCKSQKFLEAKEVLEEMKTRGV-TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T Y++ AF + + ++E+ + ++ N +I K +I +A
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 409
Query: 124 LIFDH-----------------IKGL-------------------KCKPDLITYNIVLDI 147
+I + I GL C PD++TY ++D
Sbjct: 410 VILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 469
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + GR+ + MK AG P+ ++Y TL++ L K R++D EM +G P+
Sbjct: 470 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 529
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMK--QQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
L+TY +++ +G I+E+ +L MK + + P YR++++ L V A +
Sbjct: 530 LVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQL 589
Query: 266 FEEMNSSLS 274
E+M S+ S
Sbjct: 590 LEQMKSTTS 598
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 39/218 (17%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E++ P+ + N +I F + + AL + + +K PD T+ ++ +
Sbjct: 99 LFRSELLASCEPD-VCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAM 157
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G ++ ++ SM G P+ ++Y L+ + ++L+ + EM E G P+L
Sbjct: 158 ANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNL 214
Query: 209 LTY-----------------------------------TALIDSFGRTGNIEESLRLFND 233
+TY +L+D F + GN++++ +L
Sbjct: 215 VTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGI 274
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + +RP++ Y +LID L K K A + EEM +
Sbjct: 275 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKT 312
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 109/250 (43%), Gaps = 39/250 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ LCK G ++ A +L+ +++ LP+ V+ S N + S D+LV
Sbjct: 393 NTVIDGLCKLGKIAEAQVILEQMQESGDVLPD----VVTYSTVINGLCKS-----DMLVE 443
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
++ L ++ + + ++ II K ++E+A
Sbjct: 444 AQKL------------------------LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +K C P+++TY ++ L + +V++ M+ AG P+ ++YNT++N
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 183 LRKIRRLDLCLIYFREM--GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK----Q 236
L R+ + M G + PD TY ++++ + ++E+ +L MK
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTSS 599
Query: 237 QQIRPSIYVY 246
QQ + S+ ++
Sbjct: 600 QQEQGSLTLF 609
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
++N +L +L R + + + F S A PD SYN +++ L L EM
Sbjct: 79 SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138
Query: 200 GESGIKPD--------------------------------LLTYTALIDSFGRTGNIEES 227
+G PD ++TYTALI +F R +EE+
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEA 198
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++L +M+++ P++ Y L+D L K+ V A + ++M
Sbjct: 199 MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 240
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 42/303 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLS---FQILKDLLV 61
I+ LCK A L++ + + L YN ++ + N ID++ F +K+L
Sbjct: 727 IKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 786
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y A + ++L EE+ + + + N II KSR++E+
Sbjct: 787 GPDEFT---YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ 843
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE------------------ 160
A+ ++ ++ P TY +LD L + GR+ D + NE
Sbjct: 844 AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 903
Query: 161 --------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
F M + G+ PD SY +++ L K +L+ L YFR++ E G++P
Sbjct: 904 GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEP 963
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
DL+TY LID G++ +EE++ LFN+M+++ I P++Y Y SLI +L K GK A ++
Sbjct: 964 DLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1023
Query: 267 EEM 269
EE+
Sbjct: 1024 EEL 1026
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ G V A+ + ++ K I +P +YN ++ + + + ++ K + +
Sbjct: 342 IDALCQVGRVFEALEMFDEMKQKGI-VPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 400
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + F + + + + + E + ++ N ++F AKS ++ A
Sbjct: 401 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 460
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K + PD ITY +++ + + ++ + F M E VPD ++ N+L++ L
Sbjct: 461 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 520
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R D F ++ E ++P TY L+ GR G ++E + L +M P++
Sbjct: 521 YKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 580
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +++D L K G V+ A+ + M +
Sbjct: 581 ITYNTILDCLCKNGAVNDALDMLYSMTT 608
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+++ + + N ++ + EK +F + PD+ +Y I++D L + G
Sbjct: 885 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 944
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++ND L F + E G+ PD I+YN L++ L K +RL+ + F EM + GI P+L TY
Sbjct: 945 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1004
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LI G+ G E+ +++ ++ + +P+++ Y +LI G D A + M
Sbjct: 1005 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRM 1061
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 6/275 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC AG +S A + ++ K+ P+ Y +L + D +I +
Sbjct: 272 IQVLCDAGRISDAKDVFWKMK-KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT A + L +E+ Q N +I F K+ + AL
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 390
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F H+ KP+ T+ + ++ G+ G + + MK G+VPD ++ N +L L
Sbjct: 391 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 450
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL + F E+ G+ PD +TYT +I + +E++++F DM + P +
Sbjct: 451 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 510
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF---EEMNSSLSD 275
SLID L K G+ D A IF +EMN +D
Sbjct: 511 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 545
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ + ++ AF K R +E L + ++ KP++ +Y I + +LG+ R ++
Sbjct: 194 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 253
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A M+ G PD I++ L+ L R+ F +M +S KPD +TY L+D FG
Sbjct: 254 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 313
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ + + ++N MK ++ Y ++ID L ++G+V A+ +F+EM
Sbjct: 314 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 361
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 127/305 (41%), Gaps = 36/305 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR-DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
NG + L K+G A+ + + + D + Y+ ++VA + D++ +L+++
Sbjct: 164 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 223
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT R + + ++ +I +I + +I
Sbjct: 224 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 283
Query: 122 ALLIFDHIKGLKCKPDLITY-----------------------------------NIVLD 146
A +F +K KPD +TY V+D
Sbjct: 284 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 343
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L +VGRV + L F MK+ G+VP+ SYN+L++ K R L F+ M G KP
Sbjct: 344 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 403
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ T+ I+ +G++G ++++ + MK + I P + +++ L K G++ +A +F
Sbjct: 404 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 463
Query: 267 EEMNS 271
E+ +
Sbjct: 464 HELKA 468
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ Q+ L F + + +PDLITYN+++D LG+ R+ + ++ F M++ G
Sbjct: 936 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 995
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+VP+ +YN+L+ +L K + + E+ G KP++ TY ALI + +G+ + +
Sbjct: 996 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1055
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNL 253
+ M P+ Y L + L
Sbjct: 1056 AAYGRMIVGGCLPNSSTYMQLPNQL 1080
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 27/282 (9%)
Query: 3 NGYIEKL-----CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS--- 52
NGY L K+G A++ + ++ K I +P+ A N VL A++ + ++
Sbjct: 404 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGI-VPDVVAGNAVLFGLAKSGRLGMAKRV 462
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV------VQIASPESIIVV 106
F LK + VS T++ YT +M C++ F E V ++ ++ V
Sbjct: 463 FHELKAMGVSPDTIT---YT------MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 513
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I K+ + ++A IF +K + +P TYN +L LGR G+V ++++ M
Sbjct: 514 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 573
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P+ I+YNT+L+ L K ++ L M G PDL +Y +I + E
Sbjct: 574 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 633
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ +F MK+ I P +++ + K+G + A+ I ++
Sbjct: 634 AFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKD 674
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN ++ L + G + L + M GVVP +Y+ L+ K R ++ L REM
Sbjct: 162 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 221
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G+KP++ +YT I G+ +E+ R+ M+ + +P + + LI L G++
Sbjct: 222 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRI 281
Query: 260 DLAMTIFEEMNSS 272
A +F +M S
Sbjct: 282 SDAKDVFWKMKKS 294
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD ++ K ++ T+ + LG G + MKEAG+V + +YN L+ L
Sbjct: 112 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 171
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K L +R M G+ P + TY+ L+ +FG+ ++E L L +M+ ++P++Y
Sbjct: 172 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 231
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y I L + + D A I +M +
Sbjct: 232 SYTICIRVLGQAKRFDEAYRILAKMEN 258
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 122/283 (43%), Gaps = 27/283 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQI---LK 57
N ++ LCK G V+ A+ +L S+ K +P+ +YN V+ + + +F I +K
Sbjct: 584 NTILDCLCKNGAVNDALDMLYSMTTKGC-IPDLSSYNTVIYGLVKEERYNEAFSIFCQMK 642
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+L+ +F + +M + L I + +Q S + ++ K
Sbjct: 643 KVLIPDYATLCTILPSFVKIGLMKE---ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 699
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS-- 175
IEK++ + I + I LD + + + +++ +V F S
Sbjct: 700 GIEKSIEFAEIIA---------SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 750
Query: 176 -------YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
YN+L+ L +D+ F EM E G PD TY L+D+ G++ IEE L
Sbjct: 751 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 810
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ +M ++ + Y ++I L K +++ A+ ++ + S
Sbjct: 811 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 853
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + +++++ +I N +I KS+++E+A+ +F+ ++ P+L TYN ++
Sbjct: 950 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILH 1009
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
LG+ G+ + + + G P+ +YN L+ D + M G P+
Sbjct: 1010 LGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1069
Query: 208 LLTYTAL 214
TY L
Sbjct: 1070 SSTYMQL 1076
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N +L+++ GRV DM F M+ V + ++ + L L + M E
Sbjct: 94 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 153
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
+GI + TY L+ ++G E+L ++ M + PS+ Y L+ K V+
Sbjct: 154 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVET 213
Query: 262 AMTIFEEMNS 271
+ + EM +
Sbjct: 214 VLWLLREMEA 223
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 99/166 (59%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
++ N + A K +QI +F+ +K PD+ TYNI++ GRVG V++ +N F
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEE 502
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ + PD ISYN+L+N L K +D + F+EM E G+ PD++TY+ L++ FG+T
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E + LF +M + +P+I Y L+D L+K G+ A+ ++ +M
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKM 608
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 36/245 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+E LC AG A+ +L + +K + YN V A + I
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQI--------------- 458
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + E++ + I N +I +F + ++++A+
Sbjct: 459 --------------------SHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAIN 498
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF+ ++ CKPD+I+YN +++ LG+ G V++ F M+E G+ PD ++Y+TL+
Sbjct: 499 IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K R+++ F EM G +P+++TY L+D ++G E++ L+ MKQQ + P
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDSI 618
Query: 245 VYRSL 249
Y L
Sbjct: 619 TYTVL 623
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
H KG+ D + YN V LG++ +++ + + F MK+ G PD +YN L+++ ++
Sbjct: 434 HEKGVVT--DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVG 491
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+D + F E+ S KPD+++Y +LI+ G+ G+++E+ F +M+++ + P + Y
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+L++ K +V++A ++FEEM
Sbjct: 552 TLMECFGKTERVEMAYSLFEEM 573
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 132/269 (49%), Gaps = 10/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I + + G AV L + + + L YN ++ A+ +D + Q+ SR
Sbjct: 277 IRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF------SR 330
Query: 65 TLSSDCYTN-FARAFIMTDDCTQ-LLIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEK 121
+ + C N + + ++ + L+ ++ +V+I+ + + + ++ +K + +
Sbjct: 331 MVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSE 390
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F + K + +Y +L+ L G+ + + + + E GVV D + YNT+ +
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K++++ F +M + G PD+ TY LI SFGR G ++E++ +F ++++ +P
Sbjct: 451 ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKP 510
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I Y SLI+ L K G VD A F+EM
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQ 539
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 44 AETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI 103
+T D+ + +++K + + + C +A++ + D ++ E+ + I
Sbjct: 182 GDTEDLQMCLRLVKKWGLKMNSFTYKC---LLQAYLRSRDSSKAFDVYCEIRRGGHKLDI 238
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
N ++ A AK EKA +F+ +K C+ D +Y I++ +GR+G+ ++ + F
Sbjct: 239 FAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNE 295
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ + + YNTL+ L K + +D + F M E+G +P+ TY+ +++ G
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQ 355
Query: 224 IEESLRL--FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +RL ++ ++ + IY Y L+ L K+G V A +F +M S
Sbjct: 356 L---VRLDGIVEISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWS 400
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 35/270 (12%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN +L A A+ + + Q+ +D+ YT R + + E+
Sbjct: 240 AYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEM 296
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL------ 148
+ +++ N ++ AK + ++KA+ +F + C+P+ TY++VL++L
Sbjct: 297 ITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQL 356
Query: 149 --------------------------GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
++G V++ F M V + SY ++L +
Sbjct: 357 VRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLES 416
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + + ++ E G+ D + Y + + G+ I LF MK+ P
Sbjct: 417 LCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPD 476
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+ Y LI + ++G+VD A+ IFEE+ S
Sbjct: 477 IFTYNILISSFGRVGEVDEAINIFEELERS 506
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 141/283 (49%), Gaps = 18/283 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N IE LC AG V A L +L DK + Y+ ++ + N ++++ L
Sbjct: 511 NRIIEGLCMAGKVKEAEAFLNTLEDKCL---ENYSAMVDGYCKANFTRKAYELFSRLSKQ 567
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + M + + LI +E ++ + + I+ ++I AF + +++A
Sbjct: 568 GILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRA 627
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN- 181
L+FD + PD+ITY ++++ RV + + + F MKE G+ PD I+Y +L+
Sbjct: 628 QLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDG 687
Query: 182 ----NLRKIRRLDL----------CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
NL+ R L ++ EM E GIKPD++ YT LIDS +T N++++
Sbjct: 688 HSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDA 747
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ L+++M + ++P I Y +L+ + G +D A+T+ EM+
Sbjct: 748 INLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMS 790
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 149/332 (44%), Gaps = 57/332 (17%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVS 62
+I+ LC+ GN AV + + + + + PNA C + DL ++ L+ L +
Sbjct: 233 FIKALCRKGNFEEAVDVFREMEEAGVN-PNAVTCSTYIEGLCSHKRSDLGYEALRALRAA 291
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLL------IFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ + + YT R F C+++ +FI+ V + +P+ I +I A+ K+
Sbjct: 292 NWPIDTFAYTAVIRGF-----CSEMKLKEAEDVFIDMVNEGIAPDGYIY-GALIHAYCKA 345
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +A+ + + + K + + + +L L +G ++++++F +++G+ D + Y
Sbjct: 346 GNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLY 405
Query: 177 NTLLNNLRKI---------------RRLDLCLIY--------------------FREMGE 201
N +++ L K+ RR+ L +++ F EM E
Sbjct: 406 NIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKE 465
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
GI+PD++TY L+ F R G +E+L L + + Q ++P+ + +I+ L GKV
Sbjct: 466 RGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKE 525
Query: 262 AMTIFEEMN-------SSLSDLAGPKDFKRKA 286
A + S++ D +F RKA
Sbjct: 526 AEAFLNTLEDKCLENYSAMVDGYCKANFTRKA 557
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
++NR+I + +I+ A+ I+ H+K L P+ TY I + L R G + ++ F M
Sbjct: 198 LMNRLI----EHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREM 253
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+EAGV P+ ++ +T + L +R DL R + + D YTA+I F +
Sbjct: 254 EEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKL 313
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ +F DM + I P Y+Y +LI K G + A+ + +M S+
Sbjct: 314 KEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSN 361
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 143 IVLDILG----RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+VLD+L RVG ++ ++ K G VP +S N L+N L + ++D+ + +R
Sbjct: 158 LVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRH 217
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ G+ P+ TY I + R GN EE++ +F +M++ + P+ + I+ L +
Sbjct: 218 LKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKR 277
Query: 259 VDLA 262
DL
Sbjct: 278 SDLG 281
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 42/303 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLS---FQILKDLLV 61
I+ LCK A L++ + + L YN ++ + N ID++ F +K+L
Sbjct: 852 IKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 911
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y A + ++L EE+ + + + N II KSR++E+
Sbjct: 912 GPDEFT---YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ 968
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE------------------ 160
A+ ++ ++ P TY +LD L + GR+ D + NE
Sbjct: 969 AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 1028
Query: 161 --------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
F M + G+ PD SY +++ L K +L+ L YFR++ E G++P
Sbjct: 1029 GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEP 1088
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
DL+TY LID G++ +EE++ LFN+M+++ I P++Y Y SLI +L K GK A ++
Sbjct: 1089 DLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1148
Query: 267 EEM 269
EE+
Sbjct: 1149 EEL 1151
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ G V A+ + ++ K I +P +YN ++ + + + ++ K + +
Sbjct: 467 IDALCQVGRVFEALEMFDEMKQKGI-VPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 525
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + F + + + + + E + ++ N ++F AKS ++ A
Sbjct: 526 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 585
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K + PD ITY +++ + + ++ + F M E VPD ++ N+L++ L
Sbjct: 586 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 645
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R D F ++ E ++P TY L+ GR G ++E + L +M P++
Sbjct: 646 YKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 705
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +++D L K G V+ A+ + M +
Sbjct: 706 ITYNTILDCLCKNGAVNDALDMLYSMTT 733
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+++ + + N ++ + EK +F + PD+ +Y I++D L + G
Sbjct: 1010 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1069
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++ND L F + E G+ PD I+YN L++ L K +RL+ + F EM + GI P+L TY
Sbjct: 1070 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1129
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LI G+ G E+ +++ ++ + +P+++ Y +LI G D A + M
Sbjct: 1130 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRM 1186
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 6/275 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC AG +S A + ++ K+ P+ Y +L + D +I +
Sbjct: 397 IQVLCDAGRISDAKDVFWKMK-KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT A + L +E+ Q N +I F K+ + AL
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F H+ KP+ T+ + ++ G+ G + + MK G+VPD ++ N +L L
Sbjct: 516 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 575
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL + F E+ G+ PD +TYT +I + +E++++F DM + P +
Sbjct: 576 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 635
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF---EEMNSSLSD 275
SLID L K G+ D A IF +EMN +D
Sbjct: 636 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 670
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ + ++ AF K R +E L + ++ KP++ +Y I + +LG+ R ++
Sbjct: 319 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 378
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A M+ G PD I++ L+ L R+ F +M +S KPD +TY L+D FG
Sbjct: 379 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 438
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ + + ++N MK ++ Y ++ID L ++G+V A+ +F+EM
Sbjct: 439 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 486
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 35/271 (12%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
Y+ ++VA + D++ +L+++ + YT R + + ++
Sbjct: 323 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 382
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY-------------- 141
+I +I + +I A +F +K KPD +TY
Sbjct: 383 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 442
Query: 142 ---------------------NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
V+D L +VGRV + L F MK+ G+VP+ SYN+L+
Sbjct: 443 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 502
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K R L F+ M G KP+ T+ I+ +G++G ++++ + MK + I
Sbjct: 503 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 562
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + +++ L K G++ +A +F E+ +
Sbjct: 563 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 593
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 27/282 (9%)
Query: 3 NGYIEKL-----CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS--- 52
NGY L K+G A++ + ++ K I +P+ A N VL A++ + ++
Sbjct: 529 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGI-VPDVVAGNAVLFGLAKSGRLGMAKRV 587
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV------VQIASPESIIVV 106
F LK + VS T++ YT +M C++ F E V ++ ++ V
Sbjct: 588 FHELKAMGVSPDTIT---YT------MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 638
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I K+ + ++A IF +K + +P TYN +L LGR G+V ++++ M
Sbjct: 639 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 698
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P+ I+YNT+L+ L K ++ L M G PDL +Y +I + E
Sbjct: 699 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 758
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ +F MK+ I P +++ + K+G + A+ I ++
Sbjct: 759 AFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKD 799
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN ++ L + G + L + M GVVP +Y+ L+ K R ++ L REM
Sbjct: 287 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 346
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G+KP++ +YT I G+ +E+ R+ M+ + +P + + LI L G++
Sbjct: 347 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRI 406
Query: 260 DLAMTIFEEMNSS 272
A +F +M S
Sbjct: 407 SDAKDVFWKMKKS 419
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD ++ K ++ T+ + LG G + MKEAG+V + +YN L+ L
Sbjct: 237 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 296
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K L +R M G+ P + TY+ L+ +FG+ ++E L L +M+ ++P++Y
Sbjct: 297 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 356
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y I L + + D A I +M +
Sbjct: 357 SYTICIRVLGQAKRFDEAYRILAKMEN 383
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 122/283 (43%), Gaps = 27/283 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQI---LK 57
N ++ LCK G V+ A+ +L S+ K +P+ +YN V+ + + +F I +K
Sbjct: 709 NTILDCLCKNGAVNDALDMLYSMTTKGC-IPDLSSYNTVIYGLVKEERYNEAFSIFCQMK 767
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+L+ +F + +M + L I + +Q S + ++ K
Sbjct: 768 KVLIPDYATLCTILPSFVKIGLMKE---ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 824
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS-- 175
IEK++ + I + I LD + + + +++ +V F S
Sbjct: 825 GIEKSIEFAEIIA---------SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 875
Query: 176 -------YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
YN+L+ L +D+ F EM E G PD TY L+D+ G++ IEE L
Sbjct: 876 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 935
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ +M ++ + Y ++I L K +++ A+ ++ + S
Sbjct: 936 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 978
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + +++++ +I N +I KS+++E+A+ +F+ ++ P+L TYN ++
Sbjct: 1075 LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILH 1134
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
LG+ G+ + + + G P+ +YN L+ D + M G P+
Sbjct: 1135 LGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Query: 208 LLTYTALIDSFGRTGNIEE---SLRLFNDMKQQQIRPSIYVYRSL 249
T ++ S G + + S R +++ K+ P+ +R L
Sbjct: 1195 SSTDSSNCSSPEAVGTVRKQITSHRSYHNAKE----PTTKAWRWL 1235
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N +L+++ GRV DM F M+ V + ++ + L L + M E
Sbjct: 219 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 278
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
+GI + TY L+ ++G E+L ++ M + PS+ Y L+ K V+
Sbjct: 279 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVET 338
Query: 262 AMTIFEEMNS 271
+ + EM +
Sbjct: 339 VLWLLREMEA 348
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 135/281 (48%), Gaps = 7/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK G + A LL+S+ K + PN +YN ++ + +++IL+++
Sbjct: 253 NTLIDAYCKMGRIDEAFGLLKSMSSKGM-QPNLISYNVIINGLCREGSMKEAWEILEEMG 311
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y + + Q L+ E+V+ S++ +I + K+R +
Sbjct: 312 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ FD ++ +P+ TY ++D R G +N+ M E+G P ++YN +
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + R++ L +EM E G+ PD+++Y+ +I F R G ++ + ++ +M ++ +
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
P Y SLI L +M ++ A + +EM D+ P D
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEM----LDMGLPPD 528
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 6/247 (2%)
Query: 31 FLPN--AYNCVLVASAET-NDIDLSFQILKDLLVSSRTLSSDCYTN--FARAFIMTDDCT 85
F+P +YN VL A + + LS + + ++ SR +S + YT R F +
Sbjct: 173 FMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSR-VSPNVYTYNILIRGFCSVGELQ 231
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ L E+ + +++ N +I A+ K +I++A + + +P+LI+YN+++
Sbjct: 232 KGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 291
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ L R G + + M G PD ++YNTLLN K L+ EM +G+
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P ++TYTALI+S + N+ ++ F+ M+ + +RP+ Y +LID + G ++ A I
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411
Query: 266 FEEMNSS 272
EM S
Sbjct: 412 LNEMTES 418
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 117/259 (45%), Gaps = 7/259 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY CK GN A+ ++ + +N P+ Y ++ + + +++ + + +
Sbjct: 327 NGY----CKEGNFHQAL-VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 381
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT F + + E+ + S++ N I ++E
Sbjct: 382 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 441
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + PD+++Y+ ++ R G ++ M E GV PD ++Y++L+
Sbjct: 442 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L ++RRL +EM + G+ PD TYT LI+++ G++ ++L L ++M +
Sbjct: 502 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 561
Query: 241 PSIYVYRSLIDNLKKMGKV 259
P Y LI+ L K +
Sbjct: 562 PDAVTYSVLINGLNKQART 580
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV-GRVNDMLNE 160
S V + ++ +++ I++A+ + K P +++YN VLD + R G V E
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200
Query: 161 -FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M + V P+ +YN L+ + L L F EM +G P+++TY LID++
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ G I+E+ L M + ++P++ Y +I+ L + G + A I EEM
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMG 311
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I C + A+ ++Q + +K + P+ +Y+ ++ ++D +FQ+ ++++
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGL-APDVVSYSTIISGFCRKGELDRAFQMKQEMV 486
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y++ + T+ +E++ + P +I A+ +
Sbjct: 487 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 546
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL + D + PD +TY+++++ L + R + + VP ++Y+TL+
Sbjct: 547 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N I + + ALI F G + E+ R+F M ++ +
Sbjct: 607 ENCSNI--------------------EFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 646
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P VY +I + G + A +++EM
Sbjct: 647 PGEAVYNVIIHGHCRGGNLPKAFNLYKEM 675
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 3/261 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K+G ++ L + + + P+A YN V+ + A++N++D + DL+ S +
Sbjct: 835 KSGKITELFELYKEMISRRC-KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + + EE+ + + N +I + K E A +F
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ +PDL +Y I++D L GRV++ L F +K G+ PDFI+YN ++N L K +R
Sbjct: 954 MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ L + EM GI PDL TY +L+ + G G +E++ R++ +++ + P ++ Y +
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
LI + A T+++ M
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNM 1094
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 124/242 (51%), Gaps = 6/242 (2%)
Query: 33 PNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC--YTNFARAFIMTDDCTQLL 88
P+A+ N +L ++ I F++ K+++ SR D Y + +++ + L
Sbjct: 821 PDAFTFNMLLAVHGKSGKITELFELYKEMI--SRRCKPDAITYNIVISSLAKSNNLDKAL 878
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F ++V + +I AK ++E+A+ +F+ + CKP+ +NI+++
Sbjct: 879 DFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGY 938
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G++G F M G+ PD SY L++ L R+D L YF E+ +G+ PD
Sbjct: 939 GKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDF 998
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ Y +I+ G++ +EE+L L+N+M+ + I P +Y Y SL+ NL G V+ A ++EE
Sbjct: 999 IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058
Query: 269 MN 270
+
Sbjct: 1059 LQ 1060
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 133/267 (49%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA + A +R + I LPN YN ++ I+ + ++L +
Sbjct: 374 VDVLCKARDFDEAFATFDVMRKQGI-LPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y F F + + + + E++ +I+ N +++ A+ ++ +A
Sbjct: 433 VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ ++ PD +TYN+++ +VG+V++ +N + M G PD I N+L+++L
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D F M + + P ++TY L+ G+ G +++++ LF M ++ P+
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNT 612
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +L+D K +V+LA+ +F +M
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMT 639
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 2/263 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK A ++ K P +YNC++ E + + ++ + KD+
Sbjct: 762 LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ + + T+L +E++ I N +I + AKS ++KAL F
Sbjct: 822 DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ +P TY ++D L +VGR+ + + F M + G P+ +N L+N KI
Sbjct: 882 YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+ F+ M GI+PDL +YT L+D G ++E+L FN++K + P Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+I+ L K +++ A+ ++ EM
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEM 1024
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 127/263 (48%), Gaps = 4/263 (1%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
+I+ K+G AV + ++ K I +PN A N L + AE + + + L +
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGI-VPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S Y + + + + + E+++ +IVVN +I + K+ ++++A
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+FD +K +K P ++TYN +L LG+ GRV + F SM P+ IS+NTLL+
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDC 621
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K ++L L F +M KPD+LTY +I + + + F+ +K + + P
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPD 680
Query: 243 IYVYRSLIDNLKKMGKVDLAMTI 265
+L+ L K G++ A++I
Sbjct: 681 HVTICTLLPGLVKCGQIGDAISI 703
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ KS +I + ++ + +CKPD ITYNIV+ L + ++ L+ F +
Sbjct: 827 NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS 886
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P +Y L++ L K+ RL+ + F EM + G KP+ + LI+ +G+ G+ E
Sbjct: 887 SDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTET 946
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +LF M + IRP + Y L+D L G+VD A+ F E+ S+
Sbjct: 947 ACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 126/261 (48%), Gaps = 3/261 (1%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + +L +R K F+ NAY N ++ ++ + ++ + ++ S
Sbjct: 171 GGLRQMTTVLNKMR-KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKT 229
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ A D +++ ++E+ + ++ I ++ +I++A IF +
Sbjct: 230 YSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD 289
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C PDL+TY +++D L G++ + F MK G PD + Y TLL+ LD
Sbjct: 290 DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD 349
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++ +M G PD++T+T L+D + + +E+ F+ M++Q I P+++ Y +LI
Sbjct: 350 TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
L + G+++ A+ + + M S
Sbjct: 410 CGLLRAGRIEDALKLLDTMES 430
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 13/276 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL- 59
NG I L ++G A+ + + + + + P+ Y+ ++VA + D ++ +LK++
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGL-KPSLKTYSALMVALGKKRDSEMVMVLLKEME 254
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
L + + C RA + D+ ++ +++ + P+ ++ +I A +
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKI-DEAYEIFRRMDD--EGCGPD-LVTYTVLIDALCNA 310
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFIS 175
Q+E A +F +K KPD + Y +LD G + D EF S EA G +PD ++
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL-DTFKEFWSQMEADGYMPDVVT 369
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ L++ L K R D F M + GI P+L TY LI R G IE++L+L + M+
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTME 429
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++P+ Y Y + ID K G+ A+ FE+M +
Sbjct: 430 SVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKA 465
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+P+S+ N ++ ++K Q+++A+ + + C+PD+I N ++D L + GRV++
Sbjct: 504 APDSV-TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F MK+ + P ++YNTLL+ L K R+ + F M P+ +++ L+D F
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ +E +L++F+ M +P + Y ++I L K KV+ A F ++ S+
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMH 678
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML---- 158
++ ++ K+R ++A FD ++ P+L TYN ++ L R GR+ D L
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLD 426
Query: 159 -------------------------------NEFASMKEAGVVPDFISYNTLLNNLRKIR 187
F MK G+VP+ ++ N L +L ++
Sbjct: 427 TMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMG 486
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
RL F + E+G+ PD +TY ++ + + G ++E++ L ++M + P + V
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
SLID+L K G+VD A +F+ M
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRM 568
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD++T+ I++D+L + ++ F M++ G++P+ +YNTL+ L + R++ L
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
M G++P TY ID FG++G +++ F MK + I P+I + + +L +
Sbjct: 425 LDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484
Query: 256 MGKVDLAMTIF 266
MG++ A T+F
Sbjct: 485 MGRLREAKTMF 495
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K G + A+RL + + D PN +N ++ + D + + Q+ K ++
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMSDYGC-KPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT + + L + E+ I NRII KS+++E+AL
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+++ ++ PDL TYN ++ LG G V + ++ AG+ PD +YN L+
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ ++ M G P++ TY L
Sbjct: 1079 SLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++E +F+ ++ + DL TY + L G + M M++AG V + SYN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L + L +R M G+KP L TY+AL+ + G+ + E + L +M+
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RP++Y + I L + GK+D A IF M+
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD 289
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+YN ++ +L + G + L + M G+ P +Y+ L+ L K R ++ ++ +EM
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ G++P++ T+T I GR G I+E+ +F M + P + Y LID L G++
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313
Query: 260 DLAMTIFEEMNSS 272
+ A +F +M ++
Sbjct: 314 ENAKELFVKMKAN 326
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 35/141 (24%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM-------------------GESG-- 203
K+ G+ P SYN L+ L ++ + F++M G+SG
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 204 --------------IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
KPD +TY +I S ++ N++++L F D+ RP+ Y L
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
ID L K+G+++ AM +FEEM+
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMS 920
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 3/261 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K+G ++ L + + + P+A YN V+ + A++N++D + DL+ S +
Sbjct: 835 KSGKITELFELYKEMISRRC-KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + + EE+ + + N +I + K E A +F
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ +PDL +Y I++D L GRV++ L F +K G+ PDFI+YN ++N L K +R
Sbjct: 954 MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ L + EM GI PDL TY +L+ + G G +E++ R++ +++ + P ++ Y +
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
LI + A T+++ M
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNM 1094
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 124/242 (51%), Gaps = 6/242 (2%)
Query: 33 PNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC--YTNFARAFIMTDDCTQLL 88
P+A+ N +L ++ I F++ K+++ SR D Y + +++ + L
Sbjct: 821 PDAFTFNMLLAVHGKSGKITELFELYKEMI--SRRCKPDAITYNIVISSLAKSNNLDKAL 878
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F ++V + +I AK ++E+A+ +F+ + CKP+ +NI+++
Sbjct: 879 DFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGY 938
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G++G F M G+ PD SY L++ L R+D L YF E+ +G+ PD
Sbjct: 939 GKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDF 998
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ Y +I+ G++ +EE+L L+N+M+ + I P +Y Y SL+ NL G V+ A ++EE
Sbjct: 999 IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058
Query: 269 MN 270
+
Sbjct: 1059 LQ 1060
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I+ K+G AV + ++ K I +PN A N L + AE + + + L
Sbjct: 441 NIFIDYFGKSGETGKAVETFEKMKAKGI-VPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ S Y + + + + + E+++ +IVVN +I + K+ +++
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVD 559
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD +K +K P ++TYN +L LG+ GRV + F SM E P+ IS+NTLL
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLL 619
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K ++L L F +M KPD+LTY +I + + + F+ +K + +
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMH 678
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTI 265
P +L+ L K G++ A++I
Sbjct: 679 PDHVTICTLLPGLVKCGQIGDAISI 703
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 134/267 (50%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA + A +R + I LPN YN ++ I+ + ++L +
Sbjct: 374 VDVLCKARDFDEAFATFDVMRKQGI-LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y F F + + + + E++ +I+ N +++ A+ ++ +A
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ ++ PD +TYN+++ +VG+V++ +N + M G PD I N+L+++L
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D F M + + P ++TY L+ G+ G +++++ LF M +++ P+
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNT 612
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +L+D K +V+LA+ +F +M
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMT 639
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 2/263 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK A ++ K P +YNC++ E + + ++ + KD+
Sbjct: 762 LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ + + T+L +E++ I N +I + AKS ++KAL F
Sbjct: 822 DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ +P TY ++D L +VGR+ + + F M + G P+ +N L+N KI
Sbjct: 882 YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+ F+ M GI+PDL +YT L+D G ++E+L FN++K + P Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+I+ L K +++ A+ ++ EM
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEM 1024
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ KS +I + ++ + +CKPD ITYNIV+ L + ++ L+ F +
Sbjct: 827 NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS 886
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P +Y L++ L K+ RL+ + F EM + G KP+ + LI+ +G+ G+ E
Sbjct: 887 SDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTET 946
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +LF M + IRP + Y L+D L G+VD A+ F E+ S+
Sbjct: 947 ACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 125/261 (47%), Gaps = 3/261 (1%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + +L +R K F+ NAY N ++ ++ + ++ + ++ S
Sbjct: 171 GGLRQMTTVLNKMR-KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKT 229
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ A D +++ ++E+ + ++ I ++ +I++A IF +
Sbjct: 230 YSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD 289
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C PDL+TY +++D L G++ + F MK G PD + Y TLL+ LD
Sbjct: 290 DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLD 349
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++ +M G PD++T+T L+D + + +E+ F+ M++Q I P+++ Y +LI
Sbjct: 350 TFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
L + G+++ A+ + M S
Sbjct: 410 CGLLRAGRIEDALKLLGTMES 430
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 95/176 (53%), Gaps = 1/176 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+P+S+ N ++ ++K Q+++A+ + + C+PD+I N ++D L + GRV++
Sbjct: 504 APDSV-TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F MK+ + P ++YNTLL+ L K R+ + F M E P+ +++ L+D F
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ +E +L++F+ M +P + Y ++I L K KV+ A F ++ S+
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMH 678
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 13/276 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL- 59
NG I L ++G A+ + + + + + P+ Y+ ++VA + D ++ +LK++
Sbjct: 196 NGLIHLLIQSGFCGEALEVYRRMVSEGL-KPSLKTYSALMVALGKKRDSEMVMVLLKEME 254
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
L + + C RA + D+ ++ +++ + P+ ++ +I A +
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKI-DEAYEIFRRMDD--EGCGPD-LVTYTVLIDALCNA 310
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFIS 175
Q+E A +F +K KPD + Y +LD G + D EF S EA G +PD ++
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL-DTFKEFWSQMEADGYMPDVVT 369
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ L++ L K R D F M + GI P+L TY LI R G IE++L+L M+
Sbjct: 370 FTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTME 429
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++P+ Y Y ID K G+ A+ FE+M +
Sbjct: 430 SVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKA 465
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD++T+ I++D+L + ++ F M++ G++P+ +YNTL+ L + R++ L
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
M G++P TY ID FG++G +++ F MK + I P+I + + +L +
Sbjct: 425 LGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484
Query: 256 MGKVDLAMTIF 266
MG++ A T+F
Sbjct: 485 MGRLREAKTMF 495
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K G + A+RL + + D PN +N ++ + D + + Q+ K ++
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMSDYGC-KPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT + + L + E+ I NRII KS+++E+AL
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+++ ++ PDL TYN ++ LG G V + ++ AG+ PD +YN L+
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ ++ M G P++ TY L
Sbjct: 1079 SLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++E +F+ ++ + DL TY + L G + M M++AG V + SYN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L + L +R M G+KP L TY+AL+ + G+ + E + L +M+
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RP++Y + I L + GK+D A IF M+
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD 289
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+YN ++ +L + G + L + M G+ P +Y+ L+ L K R ++ ++ +EM
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ G++P++ T+T I GR G I+E+ +F M + P + Y LID L G++
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313
Query: 260 DLAMTIFEEMNSS 272
+ A +F +M ++
Sbjct: 314 ENAKELFVKMKAN 326
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 134/344 (38%), Gaps = 80/344 (23%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L K G V A+ L +S+ +K PN ++N +L + ++++L+ ++ +
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIEKKC-SPNTISFNTLLDCFCKNDEVELALKMFSKMT 639
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV--------------- 105
V Y I + F ++ + P+ + +
Sbjct: 640 VMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGD 699
Query: 106 ---------------VNRIIF-----AFAKSRQIEKALLIFDHI--KGLKCKPD--LITY 141
VNR + +++KA++ + + G+ C+ D LI
Sbjct: 700 AISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGI-CREDSFLIPL 758
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM-- 199
VL R + ++F K+ G+ P SYN L+ L ++ + F++M
Sbjct: 759 VRVLCKHKRELYAYQIFDKFT--KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN 816
Query: 200 -----------------GESG----------------IKPDLLTYTALIDSFGRTGNIEE 226
G+SG KPD +TY +I S ++ N+++
Sbjct: 817 VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDK 876
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L F D+ RP+ Y LID L K+G+++ AM +FEEM+
Sbjct: 877 ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 100/172 (58%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ I N +I A K Q+E A I ++G P+++TY+ ++D G++G + ++
Sbjct: 339 QDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISL 398
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ MKE+GV PD +SYNTL++ K+ R D LI ++M G+K D++TY ALID++G+
Sbjct: 399 YHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGK 458
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G +++ LF+ MK + + P++ Y +LID+ K G +F E +
Sbjct: 459 QGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRA 510
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR-QIEKALLIFDHI 129
Y+ A+ + C + L + + + ++I N II A K +++AL IFD +
Sbjct: 238 YSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEM 297
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
+ +PD IT+N ++ + R G D FA M+ G+ D ++NTL++ + K ++
Sbjct: 298 QKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQM 357
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+L M I P+++TY+ +ID +G+ G EE++ L++DMK+ +RP Y +L
Sbjct: 358 ELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTL 417
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
ID K+G+ D A+ ++M
Sbjct: 418 IDIYAKLGRFDDALIACKDM 437
Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats.
Identities = 63/310 (20%), Positives = 142/310 (45%), Gaps = 44/310 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ +CK G + A ++ ++R KNI PN Y+ ++ + + + + D+
Sbjct: 345 NTLIDAVCKGGQMELAASIMTTMRGKNIS-PNVVTYSTMIDGYGKLGCFEEAISLYHDMK 403
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + LI +++ ++ ++ N +I A+ K + +
Sbjct: 404 ESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYK 463
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +FD +KG P+++TY+ ++D + G D+ N F K AG+ PD + Y++L+
Sbjct: 464 DAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLI 523
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE-------------- 226
++ K ++ ++ +EM ++GI+P+++TY +LID++GR G ++
Sbjct: 524 DSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQK 583
Query: 227 ---------------------------SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
++ +F++M+Q ++P++ + ++++ + +
Sbjct: 584 IGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASL 643
Query: 260 DLAMTIFEEM 269
A + E+M
Sbjct: 644 QEASVLLEQM 653
Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNEFASMKEA 167
++ A+ +S + +AL +F +K CKP+LITYN ++D G+ G + L+ F M++
Sbjct: 241 MVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKE 300
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
GV PD I++N+L+ + + F EM GI+ D+ T+ LID+ + G +E +
Sbjct: 301 GVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELA 360
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ M+ + I P++ Y ++ID K+G + A++++ +M S
Sbjct: 361 ASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKES 405
Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 93/163 (57%), Gaps = 3/163 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + ++E AL +F+ + ++ Y+ ++ GR GR + L F +MK+AG
Sbjct: 206 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 265
Query: 169 VVPDFISYNTLLNNLRKIRRLDL--CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
P+ I+YNT+++ K +DL L F EM + G++PD +T+ +LI R G E+
Sbjct: 266 CKPNLITYNTIIDACGK-GGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWED 324
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S R+F +M+++ I I+ + +LID + K G+++LA +I M
Sbjct: 325 SQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTM 367
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+I++ LGR+G+V L+ F ++AG + +Y+ +++ + R L F+ M +
Sbjct: 204 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 263
Query: 202 SGIKPDLLTYTALIDSFGRTG-NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+G KP+L+TY +ID+ G+ G +++++L +F++M+++ + P + SLI + G +
Sbjct: 264 AGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWE 323
Query: 261 LAMTIFEEM 269
+ +F EM
Sbjct: 324 DSQRVFAEM 332
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 135/274 (49%), Gaps = 5/274 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I+ LCK V+ A RL + K IF PN Y ++ A D + +L ++
Sbjct: 154 IDSLCKGKFVTDAYRLYSEMIAKGIF-PNVYTFSILVDALCKDRKGKQAMNLLAMMMKKG 212
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + + + L +VQ ++ N II K +++++A+
Sbjct: 213 VKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAM 272
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + K PD++TYNI++D L ++G+++ L M+ G D I+YN+LL+ L
Sbjct: 273 NLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHAL 332
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K LD + +E+ + GI+P++ TYT LID + G +E++ +F ++ + ++
Sbjct: 333 CKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITV 392
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
+ Y +I+ L K G D A+ + M N+ + D
Sbjct: 393 WTYNVMINGLCKKGLFDEALALLSRMEDNACIPD 426
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 108/226 (47%), Gaps = 3/226 (1%)
Query: 45 ETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESII 104
T I F IL +L +S +T + + + L+F + VV +
Sbjct: 57 HTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQV 116
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
++ K + A+ + ++ D++ Y+ ++D L + V D ++ M
Sbjct: 117 SYAILMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEM 173
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
G+ P+ +++ L++ L K R+ + M + G+KP+++TY A++D + +
Sbjct: 174 IAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQV 233
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++L +FN M Q+ + P+++ Y +I+ L K +VD AM +F+EM+
Sbjct: 234 NKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMH 279
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 92/169 (54%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+++ + II + K + + A ++ + P++ T++I++D L + + +N A
Sbjct: 147 VVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLA 206
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + GV P+ ++Y +++ + +++ L F M + G++P++ Y +I+ +
Sbjct: 207 MMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKK 266
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++E++ LF +M ++I P + Y LID L K+GK+ ++ + +EM S
Sbjct: 267 RVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRS 315
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 109/255 (42%), Gaps = 3/255 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK A+ LL + K + PN Y ++ N ++ + I ++
Sbjct: 189 VDALCKDRKGKQAMNLLAMMMKKGV-KPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ CY + + +E+ ++ N +I K +I +L
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D ++ + D+ITYN +L L + ++ + +K+ G+ P+ +Y TL++ L
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL+ + F+E+ G + TY +I+ + G +E+L L + M+ P
Sbjct: 368 CKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDA 427
Query: 244 YVYRSLIDNLKKMGK 258
Y ++I L + G+
Sbjct: 428 VSYETIIYALSEKGE 442
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L ++E+ I II N ++ A K+ +++A+ + IK +P++ TY ++D
Sbjct: 307 LELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDG 366
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + GR+ D F + G +YN ++N L K D L M ++ PD
Sbjct: 367 LCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPD 426
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++Y +I + G ++ +L M + R L LKK KV+ MT
Sbjct: 427 AVSYETIIYALSEKGETVKTNKLLCAM----------IVRGLSKRLKK--KVN--MTTIA 472
Query: 268 EMNSSLSDLAGPKD 281
++N + A +D
Sbjct: 473 DLNDKWAAYASLED 486
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M + P + +N +L +L KI + FR++ +GIKP ++T T L++ + TG
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
I + + + P+ + +LI +
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGM 90
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 136/266 (51%), Gaps = 5/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G AA+ LLQ + K + L NA YN V+ + ++ +F + +++
Sbjct: 49 IHGLCKVGETRAALDLLQRVDGKLVQL-NAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 107
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + Y+ F + + +F + +++ P+ N ++ F K R++++
Sbjct: 108 ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDG-YTFNILVDGFCKDRKMKEG 166
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F + PD++TYN ++D V VN + F +M + GV PD SYN L+N
Sbjct: 167 KTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 226
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
KI+++D + F EM I P+++TY +LID ++G I +L+L + M + + P+
Sbjct: 227 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 286
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEE 268
I Y S+ID L K +VD A+ + +
Sbjct: 287 ILTYNSIIDALFKTHQVDKAIALITK 312
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 86/167 (51%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
++ N +I+ K + + A ++ + P+++TY+ ++ VG++ D ++ F
Sbjct: 78 VMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNK 137
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ + PD ++N L++ K R++ F M + GI PD++TY +L+D +
Sbjct: 138 IILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKE 197
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ + +FN M Q + P I Y LI+ K+ KVD AM +F EM+
Sbjct: 198 VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 89/184 (48%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
Q +F +++V + + +I K + AL + + G + + + YN V+
Sbjct: 25 QAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVI 84
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ + VND + ++ M G+ P+ ++Y+ L++ + +L + F ++ IK
Sbjct: 85 YGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIK 144
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD T+ L+D F + ++E +F M +Q I P + Y SL+D + + +V+ A +I
Sbjct: 145 PDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSI 204
Query: 266 FEEM 269
F M
Sbjct: 205 FNTM 208
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I +N +I QI +A L D + L D ++Y ++ L +VG L+
Sbjct: 8 ITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQR 67
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ V + + YNT++ + K + ++ + EM GI P+++TY+ALI F G
Sbjct: 68 VDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGK 127
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++++ LFN + + I+P Y + L+D K K+ T+F M
Sbjct: 128 LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 173
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 137/270 (50%), Gaps = 6/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I LC++G A++L + D++ +LP+A VA + TN +D + +L
Sbjct: 118 ITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTKASQFG 177
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ--IASPESIIVVNRIIFAFAKSRQIEK 121
R + Y N I + E +Q + SP+ N +I + +K
Sbjct: 178 RRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDG-WSFNVVIKGVCRVGNFQK 236
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV-VPDFISYNTLL 180
AL + + + C PD IT+NI++D L R +VN + ++ GV +P+ ++Y +++
Sbjct: 237 ALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVI 296
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K R++ L + +M ESG +P+ +TY LI+ +G+ ++E ++R++ + ++
Sbjct: 297 SGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCP 356
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P + + SLID + G++D AM I++EM
Sbjct: 357 PDVVTFSSLIDGYCRCGQLDDAMRIWKEMG 386
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 128/273 (46%), Gaps = 9/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLV-----ASAETNDIDLSFQILK 57
N I+ +C+ GN A+ L++ + + + +LV A DL ++ +
Sbjct: 222 NVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQR 281
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
D + ++ YT+ + L ++++ + + + N +I + K+
Sbjct: 282 DGVCMPNVVT---YTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKAL 338
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+E A+ ++ + +C PD++T++ ++D R G+++D + + M + + P+ +++
Sbjct: 339 DMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFS 398
Query: 178 TLLNNLRKIRRLDLCLIYFREMG-ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++++L K R L + RE+ + I P Y +ID + G +EE+ + DM++
Sbjct: 399 IIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEE 458
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P Y Y LI G++ A+T+F +M
Sbjct: 459 KGCHPDKYTYTILIIGHCMKGRIPEAITLFHKM 491
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 6/273 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+A V+ LL+ L+ + +PN Y V+ + ++ + + D+L S
Sbjct: 260 VDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESG 319
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + D + +++ P ++ + +I + + Q++ A+
Sbjct: 320 TRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAM 379
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-EAGVVPDFISYNTLLNN 182
I+ + +P++ T++I++ L + R + L + A + P YN +++
Sbjct: 380 RIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDI 439
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K +++ + +M E G PD TYT LI G I E++ LF+ M + RP
Sbjct: 440 LCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPD 499
Query: 243 IYVYRSLIDNLKKMG---KVDLAMTIFEEMNSS 272
S I + K G +VD M I S+
Sbjct: 500 KITVNSFISCVLKAGMPNEVDQIMLIASGHASA 532
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 135/263 (51%), Gaps = 5/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G AA+ LLQ + K + L NA YN V+ + ++ +F + +++
Sbjct: 167 IHGLCKVGETRAALDLLQRVDGKLVQL-NAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 225
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + Y+ F + + +F + +++ P+ N ++ F K R++++
Sbjct: 226 ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGY-TFNILVDGFCKDRKMKEG 284
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F + PD++TYN ++D V VN + F +M + GV PD SYN L+N
Sbjct: 285 KTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 344
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
KI+++D + F EM I P+++TY +LID ++G I +L+L + M + + P+
Sbjct: 345 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 404
Query: 243 IYVYRSLIDNLKKMGKVDLAMTI 265
I Y S+ID L K +VD A+ +
Sbjct: 405 ILTYNSIIDALFKTHQVDKAIAL 427
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 45/263 (17%)
Query: 52 SFQILKD--LLVSSRTLSSD----CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV 105
SFQ LK+ L+S L + Y++ + F +D + +++
Sbjct: 29 SFQFLKNTHFLISFLILLTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFE 88
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE----F 161
N+I+ + KS+ L + ++ KP+L NI++ ++G + +++
Sbjct: 89 FNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFH 148
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRR----LDL-----------------CLIY----- 195
+ G D +SY TL++ L K+ LDL +IY
Sbjct: 149 DKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKD 208
Query: 196 ---------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+ EM GI P+++TY+ALI F G +++++ LFN + + I+P Y +
Sbjct: 209 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTF 268
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
L+D K K+ T+F M
Sbjct: 269 NILVDGFCKDRKMKEGKTVFAMM 291
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 20/153 (13%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N +I +KS +I AL + D + P+++TYN ++D L + +V+ +
Sbjct: 369 NVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALI 428
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDL--------------------CLIYFREMGE 201
K+ G+ P +Y L++ L K+ D+ L +M +
Sbjct: 429 TKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKD 488
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S P+ +TY I S +++ +LF +M
Sbjct: 489 SSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 521
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 85/221 (38%), Gaps = 58/221 (26%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK V A+ L + KNI +PN YN ++ +++ I + Q+
Sbjct: 342 INGFCKIKKVDKAMNLFNEMHCKNI-IPNVVTYNSLIDGLSKSGRISYALQL-------- 392
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++++ P +I+ N II A K+ Q++KA+
Sbjct: 393 ---------------------------VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAI 425
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRV--------------------GRVNDMLNEFAS 163
+ K +P + TY I++D L +V G ++ L+ +
Sbjct: 426 ALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSK 485
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
MK++ +P+ ++Y + +L D FREM G+
Sbjct: 486 MKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 72/182 (39%), Gaps = 11/182 (6%)
Query: 100 PESIIVVNRI-IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
P+S V + F F K+ + LI L K + I+Y+ V+D +
Sbjct: 18 PDSHFVPKKFQSFQFLKNTHFLISFLI------LLTKINFISYSSTSTTFHSNNDVDDAV 71
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ F + P +N +L +L K + L ++M GIKP+L LI F
Sbjct: 72 SLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCF 131
Query: 219 GRTG----NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ G I ++ + + Y +LI L K+G+ A+ + + ++ L
Sbjct: 132 CQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLV 191
Query: 275 DL 276
L
Sbjct: 192 QL 193
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 99/166 (59%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
++ N + A K +QI +F+ +K PD+ TYNI++ GRVG V++ +N F
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ + PD ISYN+L+N L K +D + F+EM E G+ PD++TY+ L++ FG+T
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E + LF +M + +P+I Y L+D L+K G+ A+ ++ +M
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 36/245 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+E LC AG A+ +L + +K + YN V A + I
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQI--------------- 458
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + E++ + I N +I +F + ++++A+
Sbjct: 459 --------------------SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAIN 498
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF+ ++ CKPD+I+YN +++ LG+ G V++ F M+E G+ PD ++Y+TL+
Sbjct: 499 IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K R+++ F EM G +P+++TY L+D + G E++ L++ MKQQ + P
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSI 618
Query: 245 VYRSL 249
Y L
Sbjct: 619 TYTVL 623
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
H KG+ D + YN V LG++ +++ + + F MK+ G PD +YN L+ + ++
Sbjct: 434 HEKGVVT--DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+D + F E+ S KPD+++Y +LI+ G+ G+++E+ F +M+++ + P + Y
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+L++ K +V++A ++FEEM
Sbjct: 552 TLMECFGKTERVEMAYSLFEEM 573
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 132/269 (49%), Gaps = 10/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I + + G AV L + + + L YN ++ A+ +D + Q+ SR
Sbjct: 277 IRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF------SR 330
Query: 65 TLSSDCYTN-FARAFIMTDDCTQ-LLIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEK 121
+ + C N + + ++ + L+ ++ VV+I+ + + + ++ +K + +
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSE 390
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F + K + +Y +L+ L G+ + + + + E GVV D + YNT+ +
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K++++ F +M + G PD+ TY LI SFGR G ++E++ +F ++++ +P
Sbjct: 451 ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKP 510
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I Y SLI+ L K G VD A F+EM
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQ 539
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 44 AETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI 103
T D+ + +++K + + + C +A++ + D ++ E+ + I
Sbjct: 182 GNTEDLQMCLRLVKKWDLKMNSFTYKC---LLQAYLRSRDYSKAFDVYCEIRRGGHKLDI 238
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
N ++ A AK EKA +F+ +K C+ D TY I++ +GR+G+ ++ + F
Sbjct: 239 FAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNE 295
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ + + YNTL+ L K + +D + F M E+G +P+ TY+ L++ G
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 224 IEESLRLFN--DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +RL ++ ++ + IY Y L+ L K+G V A +F +M S
Sbjct: 356 L---VRLDGVVEISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWS 400
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 112/270 (41%), Gaps = 35/270 (12%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN +L A A+ + + Q+ +D+ YT R C + + E+
Sbjct: 240 AYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEM 296
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL------ 148
+ +++ N ++ AK + ++KA+ +F + C+P+ TY+++L++L
Sbjct: 297 ITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL 356
Query: 149 --------------------------GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
++G V++ F M V + SY ++L +
Sbjct: 357 VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLES 416
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + + ++ E G+ D + Y + + G+ I LF MK+ P
Sbjct: 417 LCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPD 476
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+ Y LI + ++G+VD A+ IFEE+ S
Sbjct: 477 IFTYNILIASFGRVGEVDEAINIFEELERS 506
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 136/270 (50%), Gaps = 3/270 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN I+ LCK + A +L+ + DK+I +P+ YN ++ + + + +ILK +
Sbjct: 159 CNSIIDGLCKVQAMDKAEEVLRQMFDKHI-MPDCTTYNSLVHGYLSSGQLKEAVRILKQM 217
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y+ T+ + ++Q ++ ++ +A +
Sbjct: 218 SRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDL 277
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ + D + +PD +NI + + GR+++ + F M++ G++PD ISY T+
Sbjct: 278 VEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTM 337
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L KI RLD + F +M + G+ PD++ +T LI F G E++ LF +M + I
Sbjct: 338 IDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGI 397
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RP++ V+ ++ID L K GKV A T+F+ M
Sbjct: 398 RPTVVVFTTMIDKLFKEGKVTEAKTLFDLM 427
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C P++++Y V+ + V F M + G+ PD ++ N++++ L K++ +D
Sbjct: 114 GDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMD 173
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
R+M + I PD TY +L+ + +G ++E++R+ M + P+ Y LI
Sbjct: 174 KAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLI 233
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
D L K G A I M S
Sbjct: 234 DCLCKFGGHTEAREILNSMIQS 255
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 35/234 (14%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT F D+ + E++ P ++ N II K + ++KA + +
Sbjct: 124 YTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMF 183
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI---- 186
PD TYN ++ G++ + + M G P+ ++Y+ L++ L K
Sbjct: 184 DKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHT 243
Query: 187 --RRLDLCLIYFRE-----------------------------MGESGIKPDLLTYTALI 215
R + +I R M ++G++PD + I
Sbjct: 244 EAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQI 303
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + G ++E++ FN M+QQ + P I Y ++ID L K+G++D AM+ F +M
Sbjct: 304 YAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQM 357
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P +++ +I F K ++ KA +F + PD++T N ++D L +V ++
Sbjct: 118 PPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEE 177
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
M + ++PD +YN+L++ +L + ++M G P+ +TY+ LID
Sbjct: 178 VLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLC 237
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+ G E+ + N M Q + P++ Y L+ G
Sbjct: 238 KFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKG 275
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+TN F M + E++ +++V +I K ++ +A +FD +
Sbjct: 369 FTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMP 428
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
KP++++YN ++ G+++++L M G+ P+ +++NTLL+++ +
Sbjct: 429 IASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSM---- 484
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
G+KPD+ T LIDS G IE+ L LF +M
Sbjct: 485 ------------GLKPDVATCNTLIDSCCEDGRIEDVLTLFREM 516
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG--VVP 171
A+ R + ++ L C PD+ +Y ++L L + + ++ M E G P
Sbjct: 60 AEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPP 119
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ +SY T+++ K + F EM + GI PD++T ++ID + ++++ +
Sbjct: 120 NVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVL 179
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
M + I P Y SL+ G++ A+ I ++M+
Sbjct: 180 RQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMS 218
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL-DL 191
K P +TY I++ VG +N + + G+ + IS+ +L L +R D
Sbjct: 8 KVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDA 67
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ--QQIRPSIYVYRSL 249
I R + G PD+ +YT L+ EE++ L + M + P++ Y ++
Sbjct: 68 MNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTV 127
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I K +V A T+F EM
Sbjct: 128 IHGFFKEDEVGKAYTLFCEM 147
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 36/265 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
++ L K+G+VS A N+F C + S ET D D +L+ L S +T
Sbjct: 365 VKSLSKSGHVSEA---------HNVF------CQMWNSYETGDRDAFVSMLEVLCNSGKT 409
Query: 66 LSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
L + D + TD + + N + A K +Q+
Sbjct: 410 LEAIDLLHMMPEKGVATD--------------------VGMYNMVFSALGKLKQVSFITS 449
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD +K PDL TYNI++ GRVG V+ F M + PD I+YN+L+N L
Sbjct: 450 LFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLG 509
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K LD + F+EM E G PD+ TY+ LI+ FG++ ++ + LF DM + P++
Sbjct: 510 KNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVV 569
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L++ GK A +E M
Sbjct: 570 TYNILLDCLERHGKTAEAHKHYETM 594
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 139/312 (44%), Gaps = 46/312 (14%)
Query: 3 NGYIEKLC-----KAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQIL 56
NGY K ++ VS + + +R K L YN +L A A++ +D ++Q+
Sbjct: 185 NGYTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVF 244
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+D+ + YT R ++ L F +E+V ++I N +I A K+
Sbjct: 245 EDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKN 304
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLN-------------E 160
+ ++K + + + C+P+ TY+I LDIL G++ R+N++L+
Sbjct: 305 KMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYMNKSIYSYL 364
Query: 161 FASMKEAGVVPD--------FISYNT------------LLNNLRKIRRLDLCLIYFREMG 200
S+ ++G V + + SY T L N+ + + +DL M
Sbjct: 365 VKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDL----LHMMP 420
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
E G+ D+ Y + + G+ + LF+ MK I P ++ Y +I + ++G VD
Sbjct: 421 EKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVD 480
Query: 261 LAMTIFEEMNSS 272
A +FE+MN+S
Sbjct: 481 KASGLFEDMNAS 492
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 19 VRLLQSLRDK---NIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTN 73
V + SL DK N P+ YN ++ + +D + + +D+ SS Y +
Sbjct: 444 VSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNS 503
Query: 74 FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK 133
D + + +E+ + + + +I F KS +++ A +F +
Sbjct: 504 LINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEG 563
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
C P+++TYNI+LD L R G+ + + +MK+ G+ PD I+ + L
Sbjct: 564 CIPNVVTYNILLDCLERHGKTAEAHKHYETMKQQGLTPDSITCSIL 609
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 126/241 (52%), Gaps = 21/241 (8%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PNA Y+ ++ + +I + ++ + L+ +S + SD Y F D CT
Sbjct: 555 PNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFY------FEGNDTCT----- 603
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
IA +++ +I K++++ A + D + C+P+ I Y+ ++D +
Sbjct: 604 ------IAP--NVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G++++ F M + G +P +Y +L++ + K RLDL + EM P+++T
Sbjct: 656 IGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVT 715
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
YTA+ID + G IE++L L + M+++ P++ Y +LID L K GK D ++ +F++MN
Sbjct: 716 YTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMN 775
Query: 271 S 271
S
Sbjct: 776 S 776
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 129/292 (44%), Gaps = 27/292 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRD---------KNIFLPNAYNCVLVASAETNDIDLSF 53
N + C AG+ + A +L + NIF+ + + +AE +DL
Sbjct: 345 NSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAEL--LDLVE 402
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
++ +++L +S L+ NF+R + ++E+++ ++I
Sbjct: 403 KVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFL 462
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+++++EK+ L+F +K PD+ TY I++D + G + + F M+ G P+
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNV 522
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++Y LL+ K ++L F M ++ P+ +TY+ALID + G I+++ ++
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582
Query: 234 M----------------KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I P++ Y +LID L K KV A + + M
Sbjct: 583 LIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAM 634
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 127/344 (36%), Gaps = 76/344 (22%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + + C+ G A+ L L+D + P+A YN ++ A +++ F++ K++
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFG-YRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231
Query: 61 VSSRTLSSDCYTNFARAF------------IMTDD-------CTQL-------------L 88
S + FA+A + +D CTQ+ +
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAM 291
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F+ + + +++ ++ F K +Q I + + C P+ +N ++
Sbjct: 292 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGY 351
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN------LRKIRRLDL----------- 191
G F M G P +++YN + + L LDL
Sbjct: 352 CNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAA 411
Query: 192 --------------CLI----------YFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
CL +EM G PD TYT +I + +E+S
Sbjct: 412 SCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKS 471
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LF +MK+ + P +Y Y LID+ K G ++ A + F+EM S
Sbjct: 472 FLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRS 515
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 122/298 (40%), Gaps = 39/298 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK G + A + + K +LP + Y ++ + +DL+ ++L ++L S
Sbjct: 650 IDGFCKIGKIDNAQEVFLRM-TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDS 708
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + + L + + + +++ +I K+ + + +L
Sbjct: 709 CNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASL 768
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE-------------------- 160
+F + C P+ +TY ++++ G +++ +L+E
Sbjct: 769 KLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF 828
Query: 161 ----------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
M+ VP Y L+++ K RL+ L +E+ E ++ +
Sbjct: 829 SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTS 888
Query: 211 ---YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
Y +LI + +EE+ L+ +M ++ I P + V+ SL+ L ++ K D A+ +
Sbjct: 889 TGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 3/263 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+AG+V AA+ L+ S+ K I P YN VL D + ++ + +
Sbjct: 206 RAGDVEAAMALIDSMVSKGI-KPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDV 264
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
+ F + + L F +E+ ++ + +I F + +++ A
Sbjct: 265 RSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLRE 324
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
++ PD + Y +V+ R G + + L M G +PD ++YNTLLN L K RR
Sbjct: 325 MREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L EM E G+ PDL T+T LI + R GNIE++L+ F+ + Q++RP I Y +
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444
Query: 249 LIDNLKKMGKVDLAMTIFEEMNS 271
LID + + G + A ++++M+S
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHS 467
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 129/269 (47%), Gaps = 38/269 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+AG + A+R + +R + + P+ +++C++ ++D + + L+++
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMRGRRV-TPDVVSFSCLIGLFTRRGEMDHAAEYLREM- 325
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R F + D ++ +I F ++ +
Sbjct: 326 ---------------REFGLMPDG-------------------VIYTMVIGGFCRAGLML 351
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + D + C PD++TYN +L+ L + R++D MKE GV PD ++ TL+
Sbjct: 352 EALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLI 411
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + ++ L +F + + ++PD++TY LID R G++ ++ L++DM ++I
Sbjct: 412 HGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIF 471
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y LID+ + G+VD A +EM
Sbjct: 472 PNHVTYSILIDSHCEKGQVDNAFAFLDEM 500
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+N ++ ++ K+ Q + + ++ PD++T+N+++D R G V + SM
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
G+ P ++YN++L L + R D FR M G+ PD+ ++ LI F R G +
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE+LR + +M+ +++ P + + LI + G++D A EM
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM 325
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 114/244 (46%), Gaps = 15/244 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C+ GN+ A++ ++ D+ + P+ YN ++ D+ + ++ D+
Sbjct: 411 IHGYCRDGNIEKALQFFDTISDQRL-RPDIVTYNTLIDGMCRQGDLGKANELWDDMH--- 466
Query: 64 RTLSSDCYTNFARAFIMTDDCTQ------LLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S + + N I+ D + F++E+V +I+ N II + +S
Sbjct: 467 ---SREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ K ++ K PDLITYN ++ + G++++ N M+ V PD ++YN
Sbjct: 524 NVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYN 583
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ + +++MG GI+PD TY ++I+ GN ++S +L ++M Q+
Sbjct: 584 MIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQK 643
Query: 238 QIRP 241
+ P
Sbjct: 644 GLAP 647
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES------IIVVNRIIFAFAKSRQI 119
LSS+ N IM + L F E I+ E ++ N ++ A ++ +
Sbjct: 151 LSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDV 210
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E A+ + D + KP L+TYN VL L R GR + F +M GV PD S+N L
Sbjct: 211 EAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNML 270
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + L+ L +++EM + PD+++++ LI F R G ++ + +M++ +
Sbjct: 271 IGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGL 330
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P +Y +I + G + A+ + +EM
Sbjct: 331 MPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 118/281 (41%), Gaps = 27/281 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK +S A LL ++++ + P+ + ++ +I+ + Q
Sbjct: 373 NTLLNGLCKERRLSDAEELLNEMKERGV-PPDLCTFTTLIHGYCRDGNIEKALQFFD--T 429
Query: 61 VSSRTLSSDCYT------------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+S + L D T + +A + DD IF V SI+
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTY-----SIL---- 480
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I + + Q++ A D + P+++TYN ++ R G V+ M+
Sbjct: 481 -IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V+PD I+YNTL++ K ++ + M ++PD +TY +I F GN++E+
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEAD 599
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ M + I P Y Y S+I+ G + + +EM
Sbjct: 600 WVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEM 640
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%)
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM + + PD++T+ ++D+ R G++E ++ L + M + I+P + Y S++ L + G
Sbjct: 184 EMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNG 243
Query: 258 KVDLAMTIFEEMNS 271
+ D A +F M++
Sbjct: 244 RWDKAREVFRAMDA 257
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + +AVRLL+ + K F PN Y VL + + D + +L+++ TL
Sbjct: 356 LCKLGRIGSAVRLLREMEKKG-FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 414
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+S Y A + + I+E+ I N II+ + Q+E+A +F
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 474
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+++ + ITYN ++ L R GR D + M G D +SYN L+ + K
Sbjct: 475 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 534
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+D L+ EM E GIKP+ ++Y LI + + ++L L M Q + P I Y
Sbjct: 535 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTY 594
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+LI+ L KMG + A+ + E++++
Sbjct: 595 NTLINGLCKMGWMHAALNLLEKLHN 619
Score = 84.3 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I LCK G + A+ L+Q +R + P+ +YN ++ ++ + + ++LL
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCN-PDICSYNTIIYHLCNNEQMEEAEHMFENLL 478
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y A + + +E++ ++ N +I A K ++
Sbjct: 479 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 538
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++L++ + + KP+ ++YNI++ L + RV D L M G+ PD ++YNTL+
Sbjct: 539 RSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 598
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
N L K+ + L ++ + PD++TY LI + ++++ L N
Sbjct: 599 NGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLN 650
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 123/265 (46%), Gaps = 7/265 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC+ G A+ LL+ + ++ +P+A Y V+ A + + + +L ++L+
Sbjct: 185 LCRLGRADEALALLRGMA-RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 243
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ + + R + ++ ++ ++ ++ + RQ ++A +
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ L +++ +N V+ G++ + + +M G PD +Y+ L++ L K+
Sbjct: 304 GRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+ + REM + G P+++TYT ++ SF + G +++ L +M + + + Y
Sbjct: 360 GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+I L K G++D AM + +EM S
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRS 444
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 89/172 (51%), Gaps = 3/172 (1%)
Query: 100 PE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDM 157
PE ++++ N +I ++ +A +++ + GLK C+PD TY+I++ L ++GR+
Sbjct: 307 PELNVVLFNTVIGGCLAEGKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGRIGSA 365
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ M++ G P+ ++Y +L++ K D EM G+ + Y +I +
Sbjct: 366 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G ++E++ L +M+ Q P I Y ++I +L +++ A +FE +
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD---------------------- 146
++ K +I A+ + ++ P+++TY IVL
Sbjct: 352 LMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 411
Query: 147 -------------ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
L + GR+++ + M+ G PD SYNT++ +L +++
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAE 471
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
F + E G+ + +TY +I + R G ++++RL +M + Y LI +
Sbjct: 472 HMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAM 531
Query: 254 KKMGKVDLAMTIFEEM 269
K G VD ++ + EEM
Sbjct: 532 CKDGNVDRSLVLLEEM 547
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 2/151 (1%)
Query: 121 KALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM-KEAGVVPDFISYNT 178
+AL + D + + +P +YN+VL +L R D L + M V P ++
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L ++ R D L R M G PD + Y +I + G + E+ L N+M
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + ++ + +G+V A + + M
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRM 271
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + +AVRLL+ + K F PN Y VL + + D + +L+++ TL
Sbjct: 340 LCKLGRIGSAVRLLREMEKKG-FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 398
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+S Y A + + I+E+ I N II+ + Q+E+A +F
Sbjct: 399 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 458
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+++ + ITYN ++ L R GR D + M G D +SYN L+ + K
Sbjct: 459 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 518
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+D L+ EM E GIKP+ ++Y LI + + ++L L M Q + P I Y
Sbjct: 519 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTY 578
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+LI+ L KMG + A+ + E++++
Sbjct: 579 NTLINGLCKMGWMHAALNLLEKLHN 603
Score = 84.3 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I LCK G + A+ L+Q +R + P+ +YN ++ ++ + + ++LL
Sbjct: 404 NGMIYALCKDGRMDEAMGLIQEMRSQGCN-PDICSYNTIIYHLCNNEQMEEAEHMFENLL 462
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y A + + +E++ ++ N +I A K ++
Sbjct: 463 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 522
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++L++ + + KP+ ++YNI++ L + RV D L M G+ PD ++YNTL+
Sbjct: 523 RSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 582
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
N L K+ + L ++ + PD++TY LI + ++++ L N
Sbjct: 583 NGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLN 634
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 123/265 (46%), Gaps = 7/265 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC+ G A+ LL+ + ++ +P+A Y V+ A + + + +L ++L+
Sbjct: 169 LCRLGRADEALALLRGMA-RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 227
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ + + R + ++ ++ ++ ++ + RQ ++A +
Sbjct: 228 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 287
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ L +++ +N V+ G++ + + +M G PD +Y+ L++ L K+
Sbjct: 288 GRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 343
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+ + REM + G P+++TYT ++ SF + G +++ L +M + + + Y
Sbjct: 344 GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 403
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+I L K G++D AM + +EM S
Sbjct: 404 NGMIYALCKDGRMDEAMGLIQEMRS 428
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 89/172 (51%), Gaps = 3/172 (1%)
Query: 100 PE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDM 157
PE ++++ N +I ++ +A +++ + GLK C+PD TY+I++ L ++GR+
Sbjct: 291 PELNVVLFNTVIGGCLAEGKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGRIGSA 349
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ M++ G P+ ++Y +L++ K D EM G+ + Y +I +
Sbjct: 350 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 409
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G ++E++ L +M+ Q P I Y ++I +L +++ A +FE +
Sbjct: 410 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 461
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD---------------------- 146
++ K +I A+ + ++ P+++TY IVL
Sbjct: 336 LMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 395
Query: 147 -------------ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
L + GR+++ + M+ G PD SYNT++ +L +++
Sbjct: 396 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAE 455
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
F + E G+ + +TY +I + R G ++++RL +M + Y LI +
Sbjct: 456 HMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAM 515
Query: 254 KKMGKVDLAMTIFEEM 269
K G VD ++ + EEM
Sbjct: 516 CKDGNVDRSLVLLEEM 531
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 56/134 (41%)
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
+ P T+ + L R+GR ++ L M G VPD + Y T+++ L +
Sbjct: 154 RVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 213
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
EM G D+ T+ ++ G + E+ RL + M + P + Y L+
Sbjct: 214 ATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQG 273
Query: 253 LKKMGKVDLAMTIF 266
L ++ + D A +
Sbjct: 274 LCRVRQADEARAML 287
Score = 37.0 bits (84), Expect = 9.0, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V P ++ L ++ R D L R M G PD + Y +I + G + E+
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L N+M + + ++ + +G+V A + + M
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 255
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 117/237 (49%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
PN ++ A N +F + + + + +T + + + + + +
Sbjct: 30 PNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYK 89
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++VQ N +I F +S Q++ A+ +F +K +PD TY +++ LG+ G
Sbjct: 90 KLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAG 149
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
RV + + F +M E G+ P+ +YN L++ RK+ +LD+ L F EM G +P ++TY
Sbjct: 150 RVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYN 209
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+D+ G + + +LF+ M P Y Y +L++ L K G+V+ A +F EM
Sbjct: 210 ILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREM 266
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC AG V AA +L + P++Y + ++ ++ ++ + ++ ++++
Sbjct: 212 LDALCSAGRVGAARKLFHKMTGDGC-SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + ++ ++E+ + N I+ A K+ + + A
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + CKPDLI+YNI++D R G M EAG +P+ +YN+L++ L
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWL 390
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++D EM +G +PD++TY L+D G+ G + + RLF MK + + P
Sbjct: 391 ATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDT 450
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y ID L ++D A+ +F++M +
Sbjct: 451 LSYAVRIDGLAFDDRLDEALVLFKDMKA 478
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN ++ + +D + ++ +++ + Y A + F + +
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
++ +I N ++ AF K Q++ AL +F +K +P ++TYNI+LD L GRV
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
F M G PD +Y+TL+N L K R++ FREM + G+ DL+ Y +L
Sbjct: 222 GAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + + GN++ +L +M ++ P + + +++D L K K D A +F M S
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES 339
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%)
Query: 39 VLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIA 98
+LV A +D +LK+++ R L + A+ + + A
Sbjct: 1 MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
++ ++I S + E+A L++ + C+ D YN+++ GR G+++ +
Sbjct: 61 CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F MK G PD +Y L+N L K R+ +F M E G+ P++ TY L+D+F
Sbjct: 121 EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ G ++ +L LF +MK++ +PS+ Y L+D L G+V A +F +M
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTG 233
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 5/270 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ L KAG V A ++ ++ + PN YN ++ A + +D++ + ++
Sbjct: 142 VNALGKAGRVQEARSFFDAMLERGL-TPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG 200
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S Y A +F + SP+S + ++ KS ++E+A
Sbjct: 201 FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY-TYSTLVNGLGKSGRVEEA 259
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F + DL+ YN +L L + G ++ + M G PD S+NT+++
Sbjct: 260 HKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDA 319
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K + D F M ESG KPDL++Y LIDS+ R G+ ++ ++ +M + P
Sbjct: 320 LGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPE 379
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y SLI L G+VD A + EEM ++
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETA 409
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 15/231 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N + L KAGN+ +L++ + K F P+A+ N ++ A + N D + ++
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKG-FHPDAFSFNTIMDALGKANKPDAAREVF---- 333
Query: 61 VSSRTLSSDCYTNFARAFIMTD------DCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
+R + S C + I+ D D Q +EE+V+ N +I A
Sbjct: 334 --ARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLA 391
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
Q+++A + + ++ C+PD++TYN ++D+LG+ G F MK+ GV PD +
Sbjct: 392 TDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTL 451
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
SY ++ L RLD L+ F++M G D Y LI + R G+ E
Sbjct: 452 SYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E++ + + N ++ A K Q++ A I + G K P+++TY+ + D + G
Sbjct: 318 EMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAG 377
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ D LN + MK G+ D +SYNTLL+ K+ R + L +EMG SG+K D++TY
Sbjct: 378 RLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYN 437
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
AL+D +G+ G E R+F +MK+ ++ P++ Y +LID K + AM +F E +
Sbjct: 438 ALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQA 497
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 95/168 (56%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + + +AK+ ++E AL +++ +K L D ++YN +L I ++GR D L
Sbjct: 362 NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M +GV D ++YN LL+ K + + F+EM + + P+LLTY+ LID + +
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKG 481
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE++ +F + KQ ++ + +Y LI+ L K G VD A+ + +EM
Sbjct: 482 SLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEM 529
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 125/248 (50%), Gaps = 8/248 (3%)
Query: 9 LCKAGNVSAAVR-----LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSS 63
+C G + A R ++ D+++F YN +L A + +DL+++I+ ++
Sbjct: 302 VCSRGGLWEAARNLFNEMIDRGIDQDVF---TYNTLLDAVCKGGQMDLAYEIMLEMPGKK 358
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ A + L E+ + + N ++ +AK + E AL
Sbjct: 359 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDAL 418
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + K D++TYN +LD G+ G+ N++ F MK+ V P+ ++Y+TL++
Sbjct: 419 KVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVY 478
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + FRE ++G+K D++ Y+ LI++ + G ++ ++ L ++M ++ IRP++
Sbjct: 479 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNV 538
Query: 244 YVYRSLID 251
Y S+ID
Sbjct: 539 VTYNSIID 546
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNE 160
++ + +I A+ KS ++A+ +F+ +K KP+L+TYN V+D G+ G ++
Sbjct: 221 TVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEI 280
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M GV PD I+YN+LL + + F EM + GI D+ TY L+D+ +
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCK 340
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++ + + +M ++I P++ Y ++ D K G+++ A+ ++ EM
Sbjct: 341 GGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEM 389
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
Query: 102 SIIVVNRIIFAFAKSR-QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++ N +I A K + ++ + IF+ + +PD ITYN +L + R G N
Sbjct: 256 NLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL 315
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M + G+ D +YNTLL+ + K ++DL EM I P+++TY+ + D + +
Sbjct: 316 FNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAK 375
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G +E++L L+N+MK I Y +L+ K+G+ + A+ + +EM SS
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSS 427
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G + A ++ + K I LPN Y+ + A+ ++ + + ++
Sbjct: 332 NTLLDAVCKGGQMDLAYEIMLEMPGKKI-LPNVVTYSTMADGYAKAGRLEDALNLYNEMK 390
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y + L +E+ + ++ N ++ + K +
Sbjct: 391 FLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFN 450
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F +K + P+L+TY+ ++D+ + + + F K+AG+ D + Y+ L+
Sbjct: 451 EVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELI 510
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
N L K +D ++ EM + GI+P+++TY ++ID+FGR+ E
Sbjct: 511 NALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++ LGR+G+V F + G +++ L++ K D + F M SG
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 204 IKPDLLTYTALIDSFGRTG-NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+KP+L+TY A+ID+ G+ G + + +F +M + ++P Y SL+ + G + A
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312
Query: 263 MTIFEEM 269
+F EM
Sbjct: 313 RNLFNEM 319
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ +++ L ++ +++L F G + ++ALI ++G++G +E++++F MK
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 237 QQIRPSIYVYRSLIDNLKKMG-KVDLAMTIFEEM 269
++P++ Y ++ID K G + + IFEEM
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E++ + + N ++ A K Q++ A I + G K P+++TY+ + D + G
Sbjct: 318 EMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAG 377
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ D LN + MK G+ D +SYNTLL+ K+ R + L +EMG SG+K D++TY
Sbjct: 378 RLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYN 437
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
AL+D +G+ G E R+F +MK+ ++ P++ Y +LID K + AM +F E +
Sbjct: 438 ALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQA 497
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 95/168 (56%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + + +AK+ ++E AL +++ +K L D ++YN +L I ++GR D L
Sbjct: 362 NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M +GV D ++YN LL+ K + + F+EM + + P+LLTY+ LID + +
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKG 481
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE++ +F + KQ ++ + +Y LI+ L K G VD A+ + +EM
Sbjct: 482 SLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEM 529
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 125/248 (50%), Gaps = 8/248 (3%)
Query: 9 LCKAGNVSAAVR-----LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSS 63
+C G + A R ++ D+++F YN +L A + +DL+++I+ ++
Sbjct: 302 VCSRGGLWEAARNLFNEMIDRGIDQDVF---TYNTLLDAVCKGGQMDLAYEIMLEMPGKK 358
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ A + L E+ + + N ++ +AK + E AL
Sbjct: 359 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDAL 418
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + K D++TYN +LD G+ G+ N++ F MK+ V P+ ++Y+TL++
Sbjct: 419 KVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVY 478
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + FRE ++G+K D++ Y+ LI++ + G ++ ++ L ++M ++ IRP++
Sbjct: 479 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNV 538
Query: 244 YVYRSLID 251
Y S+ID
Sbjct: 539 VTYNSIID 546
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNE 160
++ + +I A+ KS ++A+ +F+ +K KP+L+TYN V+D G+ G ++
Sbjct: 221 TVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEI 280
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M GV PD I+YN+LL + + F EM + GI D+ TY L+D+ +
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCK 340
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++ + + +M ++I P++ Y ++ D K G+++ A+ ++ EM
Sbjct: 341 GGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEM 389
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
Query: 102 SIIVVNRIIFAFAKSR-QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++ N +I A K + ++ + IF+ + +PD ITYN +L + R G N
Sbjct: 256 NLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL 315
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M + G+ D +YNTLL+ + K ++DL EM I P+++TY+ + D + +
Sbjct: 316 FNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAK 375
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G +E++L L+N+MK I Y +L+ K+G+ + A+ + +EM SS
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSS 427
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G + A ++ + K I LPN Y+ + A+ ++ + + ++
Sbjct: 332 NTLLDAVCKGGQMDLAYEIMLEMPGKKI-LPNVVTYSTMADGYAKAGRLEDALNLYNEMK 390
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y + L +E+ + ++ N ++ + K +
Sbjct: 391 FLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFN 450
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F +K + P+L+TY+ ++D+ + + + F K+AG+ D + Y+ L+
Sbjct: 451 EVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELI 510
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
N L K +D ++ EM + GI+P+++TY ++ID+FGR+ E
Sbjct: 511 NALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++ LGR+G+V F + G +++ L++ K D + F M SG
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 204 IKPDLLTYTALIDSFGRTG-NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+KP+L+TY A+ID+ G+ G + + +F +M + ++P Y SL+ + G + A
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312
Query: 263 MTIFEEM 269
+F EM
Sbjct: 313 RNLFNEM 319
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ +++ L ++ +++L F G + ++ALI ++G++G +E++++F MK
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 237 QQIRPSIYVYRSLIDNLKKMG-KVDLAMTIFEEM 269
++P++ Y ++ID K G + + IFEEM
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 102/180 (56%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F +++ S+ N +I K +E + +F ++ + PD++TYN ++D G
Sbjct: 217 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 276
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+VG + ++ + F MK+ G VPD I+YN L+N K ++ YF EM +G+KP+++
Sbjct: 277 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 336
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ LID+F + G ++ +++L DM++ + P+ + Y SLID K G + A + +M
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 396
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 97/171 (56%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ ++ N +I + K +E+ +F+ +K + C PD+ITYN +++ + ++
Sbjct: 262 SPD-VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 320
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F+ MK G+ P+ ++Y+TL++ K + + +M +G+ P+ TYT+LID+
Sbjct: 321 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDAN 380
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ GN+ E+ +L NDM Q ++ +I Y +L+D L K G++ A +F M
Sbjct: 381 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 127/266 (47%), Gaps = 1/266 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CKAGN++ A +LL + + L Y +L + + + ++ + +L
Sbjct: 377 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 436
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + YT +I + + ++++ + +I+ II+ R++E+ L
Sbjct: 437 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 496
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + +K + + ++D + G+ +D LN F M++ GV ++Y L++ L
Sbjct: 497 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 556
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++L + YF M G++P++ YT+LID IE + +LF++M+ + + P I
Sbjct: 557 EAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDIT 616
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +LID K G + A+ + M
Sbjct: 617 AFTALIDGNLKHGNLQEALVLISRMT 642
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 11/275 (4%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN + +L K+GN + + I P+ YN ++ + D++ S + L
Sbjct: 198 CNFLLHRLSKSGNGQLVRKFFNDMIGAGI-APSVFTYNVMIDYLCKEGDLENS----RRL 252
Query: 60 LVSSRT--LSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
V R LS D Y + + ++ E+ + II N +I + K
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A F +K KP+++TY+ ++D + G + + M+ G++P+ +
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFT 372
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y +L++ K L +M ++G+K +++TYTAL+D + G + E+ +F M
Sbjct: 373 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ I P+ VY +L+ K +++ AM I ++M
Sbjct: 433 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A F ++ + P + N +L L + G + F M AG+ P +YN
Sbjct: 176 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNV 235
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K L+ F +M E G+ PD++TY +LID +G+ G++EE LFN+MK
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 295
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I Y LI+ K K+ A F EM ++
Sbjct: 296 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN 329
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 125/278 (44%), Gaps = 17/278 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS---FQILK 57
N I+ LCK G++ + RL +R+ + P+ YN ++ + ++ F +K
Sbjct: 234 NVMIDYLCKEGDLENSRRLFVQMREMGL-SPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 292
Query: 58 DLLVSSRTLSSD----CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
D+ ++ + CY F + + + E+ +++ + +I AF
Sbjct: 293 DVGCVPDIITYNGLINCYCKFEKM-------PRAFEYFSEMKNNGLKPNVVTYSTLIDAF 345
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K ++ A+ + ++ P+ TY ++D + G + + M +AGV +
Sbjct: 346 CKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 405
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++Y LL+ L K R+ FR M + GI P+ YTAL+ + + +E+++++
Sbjct: 406 VTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 465
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + I+P + +Y S+I K++ I EEM S
Sbjct: 466 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 503
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 126/273 (46%), Gaps = 11/273 (4%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
+ +GYI KA + A+++L+ + + NI P+ Y ++ ++ + IL++
Sbjct: 446 LVHGYI----KAERMEDAMKILKQMTECNI-KPDLILYGSIIWGHCSQRKLEETKLILEE 500
Query: 59 LLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ SR +S++ T A+ + L F +E+ + +I+ +I ++
Sbjct: 501 M--KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEA 558
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+E A+ F + L +P++ Y ++D L + F M+ G+ PD ++
Sbjct: 559 GIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAF 618
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L++ K L L+ M E I+ DL YT+L+ F + G + ++ + FN+M +
Sbjct: 619 TALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIE 678
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I P + L+ K G++D A+ + EM
Sbjct: 679 KGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I CK + A +++ N PN Y+ ++ A + + + ++L D+
Sbjct: 304 NGLINCYCKFEKMPRAFEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMR 362
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT+ A + T+ + +++Q +I+ ++ K+ ++
Sbjct: 363 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 422
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + P+ Y ++ + R+ D + M E + PD I Y +++
Sbjct: 423 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 482
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
R+L+ + EM GI + + T +ID++ + G ++L F +M+ +
Sbjct: 483 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 542
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+I Y LID L + G V+LA+ F M S
Sbjct: 543 ATIVTYCVLIDGLCEAGIVELAVDYFCRMLS 573
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ V +I + IE A +FD ++ PD+ + ++D + G + + L
Sbjct: 579 NVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLI 638
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M E + D Y +L++ + L +F EM E GI P+ + L+ + +
Sbjct: 639 SRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKR 698
Query: 222 GNIEESLRLFNDMKQ 236
G ++E++ L N+M++
Sbjct: 699 GQLDEAIELKNEMER 713
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 123/236 (52%), Gaps = 17/236 (7%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFAR--AFIMTDDCTQLLI-------------FIEE 93
D F +L DL + ++ C++ R F T C LL F ++
Sbjct: 66 FDALFSVLIDLGMLEE--ATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKD 123
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ S ++ N +I K IE A +F+ +K PD +TYN ++D G+VGR
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++D + F MK PD I+YN+L+N K +L L ++REM +SG+KP++++Y+
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+D+F + ++++++ + DM++ P+ + Y SL+D K+G + A + EM
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 95/166 (57%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N +I + K +++ + F+ +K + C+PD+ITYN +++ + G++ L +
Sbjct: 169 VTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYRE 228
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK++G+ P+ +SY+TL++ K + + ++ +M G P+ TYT+L+D+ + GN
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGN 288
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ RL N+M + + ++ Y +LID L ++ A +F +M
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKM 334
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 129/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ + K G++ AA L + ++ + + +P+ YN ++ + +D + +++ S
Sbjct: 140 IDCMWKEGDIEAARGLFEEMKFRGL-IPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + F + + L F E+ Q +++ + ++ AF K +++A+
Sbjct: 199 CEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAI 258
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ + P+ TY ++D ++G ++D M E GV + ++Y L++ L
Sbjct: 259 KFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGL 318
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R+ F +M +G+ P+L +Y ALI F + N++ +L L N++K + I+P +
Sbjct: 319 CDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDL 378
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y + I L + K++ A + EM
Sbjct: 379 LLYGTFIWGLCGLEKIEAAKVVMNEM 404
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 125 IFDHIKGLK--CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+FD + + C P ++ + +L +G + + F+ MK V P S N LL+
Sbjct: 48 VFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHK 107
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K+ + D +F++M +G KP + TY +ID + G+IE + LF +MK + + P
Sbjct: 108 FAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPD 167
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y S+ID K+G++D + FEEM S
Sbjct: 168 TVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A F +K + P + N +L ++G+ + + F M AG P +YN
Sbjct: 79 LEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNI 138
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + K ++ F EM G+ PD +TY ++ID +G+ G +++++ F +MK
Sbjct: 139 MIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y SLI+ K GK+ + + EM S
Sbjct: 199 CEPDVITYNSLINCFCKSGKLPKGLEFYREMKQS 232
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 129/305 (42%), Gaps = 39/305 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK+G + + + ++ + PN +Y+ ++ A + + + + + D+
Sbjct: 207 NSLINCFCKSGKLPKGLEFYREMKQSGL-KPNVVSYSTLVDAFCKEDMMQQAIKFYVDMR 265
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT+ A + + E++++ +++ +I + +++
Sbjct: 266 RVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMK 325
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + P+L +YN ++ + ++ L +K G+ PD + Y T +
Sbjct: 326 EAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFI 385
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ-- 238
L + +++ + EM E+GIK + L YT L+D++ ++GN E L L +M++
Sbjct: 386 WGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHE 445
Query: 239 ----------------------------------IRPSIYVYRSLIDNLKKMGKVDLAMT 264
++P+ VY ++ID L K +V A T
Sbjct: 446 VTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATT 505
Query: 265 IFEEM 269
+FE+M
Sbjct: 506 LFEQM 510
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 126/269 (46%), Gaps = 8/269 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC A + A +L + + +PN +YN ++ + ++D + ++L +L
Sbjct: 315 IDGLCDAERMKEAEKLFGKMVTAGV-IPNLASYNALIHGFVKAKNMDRALELLNEL--KG 371
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R + D Y F + + + E+ + + ++ ++ A+ KS +
Sbjct: 372 RGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTE 431
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-EAGVVPDFISYNTLL 180
L + + ++ L + ++T+ +++D L + V+ ++ F M + G+ P+ Y ++
Sbjct: 432 GLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMI 491
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ F +M + G+ PD YT+L+D + GN+ E+L L + M + ++
Sbjct: 492 DGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMK 551
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y SL+ + ++ A + EEM
Sbjct: 552 LDLLAYTSLVWGFSQCNQLQKARSFLEEM 580
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I KA N+ A+ LL L+ + I P+ Y + I+ + ++ ++
Sbjct: 347 NALIHGFVKAKNMDRALELLNELKGRGI-QPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQ 405
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT A+ + + T+ L +EE+ ++ +++ +I K++ +
Sbjct: 406 ENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVS 465
Query: 121 KALLIFDHIKG-LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
KA+ F + +P+ Y ++D L + +V F M + G+VPD +Y +L
Sbjct: 466 KAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSL 525
Query: 180 LN-NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ NL++ L+ L +M E G+K DLL YT+L+ F + ++++ +M ++
Sbjct: 526 MDGNLKQGNMLE-ALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEE 584
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTI 265
I P + ++ ++G +D A+ +
Sbjct: 585 ILPDEVLCIGVLKKHYELGCIDEAVGL 611
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + +++ + L AYN V+ ++ +D ++++L+++ V
Sbjct: 573 IHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRV 632
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE ++IV + +I F K +I++A L
Sbjct: 633 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 692
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N ++D L + +N+ L F SMKE P+ +Y+ L+N L
Sbjct: 693 ILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLC 752
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++++ + ++++EM + G+ P+++TYT +I + GNI ++ LF K P
Sbjct: 753 RVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAA 812
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
+ +LI+ + + A +FEE
Sbjct: 813 SFNALIEGMSHANRAIEAYHVFEE 836
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
+++LCKA A + ++ + + C L+ + ++D ++++ +++L +
Sbjct: 433 VDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGH 492
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT+ R F M +E+ + + ++N + K+ +EK
Sbjct: 493 NANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRA 552
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF+ IKG PD+ +Y+I++ L + G+ + + F +MK+ G D +YN +++
Sbjct: 553 IFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFC 612
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K +LD EM + P + TY ++ID + ++E+ LF + K + I ++
Sbjct: 613 KSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 672
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLID K+G++D A I EEM
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEEM 697
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 127/267 (47%), Gaps = 4/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ KAGNV A + L+ + + P+ +Y ++ + + + ++ +
Sbjct: 259 IDCFGKAGNVDMAWKFFHELKSQGL-KPDDVSYTSMIWVLCKAGRLSEAEELFGQMETER 317
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + ++++ + S++ N I+ K R++++AL
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEAL 377
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K +P+ TYNI++D+L G+V + M+ AG+ P+ ++ N +++ L
Sbjct: 378 TLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRL 436
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + F + G P+ +TY +LID G+ GN++++ RLF +M +
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
VY SLI N G+ + IF+EMN
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMN 523
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 133/279 (47%), Gaps = 5/279 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ + KAG+V + + ++ FLP+ +Y+ ++ + + I +
Sbjct: 535 NTYMDCVFKAGDVEKGRAIFEDIKGYG-FLPDVRSYSILIHGLTKAGQARETSSIFHAMK 593
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + Y F + + +EE+ P ++ II AK +++
Sbjct: 594 QQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLD 653
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++F+ K + ++I Y+ ++D G+VGR+++ M + G+ P+ ++N+L+
Sbjct: 654 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 713
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ LI F+ M E P+ TY+ LI+ R ++ + +M++Q +
Sbjct: 714 DALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLV 773
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE--EMNSSLSDLA 277
P++ Y ++I L K+G + A ++FE + N D A
Sbjct: 774 PNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAA 812
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT A + L + ++ ++ + + ++ A A+ ++E AL + D +K
Sbjct: 185 YTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVK 244
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G +PD++ YN+ +D G+ G V+ F +K G+ PD +SY +++ L K RL
Sbjct: 245 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLS 304
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F +M P Y +I +G G E + +L + +K++ PS+ + S++
Sbjct: 305 EAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSIL 364
Query: 251 DNLKKMGKVDLAMTIFEEM 269
L K KVD A+T+FE M
Sbjct: 365 TCLGKKRKVDEALTLFEAM 383
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N ++ CK+G + A +L+ ++ K + A Y ++ A+ + +D ++ + ++
Sbjct: 605 NAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 664
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L+ Y++ F + + +EE+++ ++ N ++ A K+ +I +
Sbjct: 665 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINE 724
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL+ F +K +KC P+ TY+I+++ L RV + N + M++ G+VP+ ++Y T++
Sbjct: 725 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIA 784
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K+ + F +G PD ++ ALI+ E+ +F + + + R
Sbjct: 785 GLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRI 844
Query: 242 SIYVYRSLIDNLKK 255
++ SL+D L K
Sbjct: 845 NVKACISLLDALNK 858
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 10/215 (4%)
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR----IIFAFAKS 116
S L +D Y N F+ D L +E+V++ S V N ++ A ++
Sbjct: 107 ASPHPLPADAY-NAVLPFLSHD-----LAAMEKVLEEMSVLGYGVPNPACADLVSALVRT 160
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
R+++ A + ++ LK +P Y +++ + + L M+E G +
Sbjct: 161 RRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLF 220
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TL+ L + R++ L E+ S ++PD++ Y ID FG+ GN++ + + F+++K
Sbjct: 221 TTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKS 280
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Q ++P Y S+I L K G++ A +F +M +
Sbjct: 281 QGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMET 315
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 140 TYNIVLDILGR-VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
YN VL L + + +L E + + VP+ + L++ L + RRLD
Sbjct: 116 AYNAVLPFLSHDLAAMEKVLEEMSVLGYG--VPNPACAD-LVSALVRTRRLDDAERVIAA 172
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M +P YT LI + E +L L M++ + ++ +L+ L + G+
Sbjct: 173 MRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGR 232
Query: 259 VDLAMTIFEEMNSS 272
V+ A+ + +E+ S
Sbjct: 233 VEGALALVDEVKGS 246
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 18/286 (6%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSL------RDKNIF--LPNAYNCVLVASAETNDIDLS 52
+CN I C+ G + A RLL + RD + L NA+ + + +++
Sbjct: 198 VCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH----CRAGQMHEVASF 253
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
++ + LS+ Y + FI + E + S + N +I A
Sbjct: 254 MELARH---DGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-A 309
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
KS+Q+E+AL +F + D+ TY+ ++D G+ GR L F +M++AG +PD
Sbjct: 310 LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPD 369
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+ YN L++ L K ++D L +M GI PD TY +ID G E++ F
Sbjct: 370 TVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG 429
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
MK+++ P + Y +L++ LKK+ + D A +F+EM N + DL
Sbjct: 430 MMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDL 475
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 4/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ + G ++ A +L +S K +P+ YN +L+A ++ ++ + + ++
Sbjct: 270 NFIIQGFIRCGRLAEATQLFESTMTKES-VPDVFTYN-LLIALCKSKQLEEALTLFQEAE 327
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y+ AF + L + + +V N +I K +++
Sbjct: 328 QGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVD 387
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + + PD TYNIV+D+L GR + F MK PD ++YNTLL
Sbjct: 388 EALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLL 447
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L+K+RR D F EM + PDL T+ LID+ + G +E++L + +
Sbjct: 448 NGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHA 507
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y+Y +LI + G+VD +F++M
Sbjct: 508 PNSYIYNALISGFCRSGQVDKGYELFQDM 536
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 133/264 (50%), Gaps = 9/264 (3%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
KAG + A+ + +++ K +P+ YN ++ + +D + ++L+D+ + + +
Sbjct: 347 KAGRAAKALEVFYNMQ-KAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM--NRKGIMP 403
Query: 69 DCYTNFARAFIMTDDCT---QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
DC T + + C + F + + ++ N ++ K R+ ++A +
Sbjct: 404 DCRT-YNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 462
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
FD ++ KC PDL T+ ++D L + GR+ D L + A + + G P+ YN L++ +
Sbjct: 463 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCR 522
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
++D F++M E PD +TYT L+ F R G+ ++ L +M ++ P++
Sbjct: 523 SGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALAT 582
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI +L G+V+ A T+F+EM
Sbjct: 583 YNVLIRSLSMAGQVEDAYTLFKEM 606
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 17/277 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I CKAG+ A+ + + L+ + PNA ++ +++ + + + + +++L
Sbjct: 129 NTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEML 188
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCT-------QLLIFIEEVVQIASPESIIVVNRIIFAF 113
+ L +D N I CT Q + + A ++ A
Sbjct: 189 GAG--LKAD--VNVCNTLI---HCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
++ Q+ + + + C + YN ++ R GR+ + F S VPD
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDV 301
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+YN LL L K ++L+ L F+E + G+ D+ TY+ L+D+FG+ G ++L +F +
Sbjct: 302 FTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYN 360
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
M++ P VY LI L K GKVD A+ + E+MN
Sbjct: 361 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 397
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 117 RQIEKALLIFDHIK-GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV-PDFI 174
R++E+A+ +FD ++ C PD++ YN ++ + G + L+ F +K+ G P+ +
Sbjct: 103 RRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAV 162
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S++TL+ L K+ R L F+EM +G+K D+ LI R G + ++ RL + M
Sbjct: 163 SFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM 222
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ Y L++ + G++ + E
Sbjct: 223 TAHACARDAFTYGILVNAHCRAGQMHEVASFME 255
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+V++ + + N +I F +S Q++K +F + C PD ITY I++ R G
Sbjct: 501 LVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGH 560
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ + M G P +YN L+ +L +++ F+EM G PD+ TY+A
Sbjct: 561 TSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSA 620
Query: 214 L 214
L
Sbjct: 621 L 621
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
L + + +AG+ D + ++ + K+ R +L E+ + G+ +T T I +
Sbjct: 3 LATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQA 62
Query: 218 FGRTGNIEESLRLFNDMKQQQI-RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
FGR G+++ ++ + +DM++ +P + + + L ++ +V+ AMT+F++M +
Sbjct: 63 FGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRET 118
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG L +++D+ L AYN V+ ++ ++ ++Q+L+++
Sbjct: 452 IHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGH 511
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE + ++ + +I F K ++++A L
Sbjct: 512 HPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYL 571
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + + P++ T+N +LD L + +N+ L F SMK+ P+ I+Y L+N L
Sbjct: 572 VMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLC 631
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K+R+ + ++++EM + G+KP+ +TYTA+I ++GN+ ++ LF + P
Sbjct: 632 KVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSA 691
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
Y ++I+ L + A +FEE
Sbjct: 692 SYNAMIEGLSIANRALDAYQLFEE 715
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
Query: 31 FLPNAYNCV-LVASA-ETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
F P Y CV LVAS ++ + +F +L+ + + YT A + ++L
Sbjct: 22 FGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRML 81
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
++ ++ ++ ++ +I F++ +++ AL + D +K D++ YN+ +D
Sbjct: 82 ALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCF 141
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G+VG+V+ F MK G+VPD ++Y +++ L K RLD + F +M ++ P
Sbjct: 142 GKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCA 201
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y +I +G G +E+ L + + PS+ Y ++ L K GK D A+ IFEE
Sbjct: 202 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE 261
Query: 269 M 269
M
Sbjct: 262 M 262
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 128/265 (48%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
I++LCKA + A + + + K A C L+ + +D +++I + +L + +
Sbjct: 312 IDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ 371
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT+ R F D +E+++ ++++N + K+ + EK
Sbjct: 372 IPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRA 431
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ IK PD +Y+I++ L + G + + +MK+ G V D +YNT+++
Sbjct: 432 LFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFC 491
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K +++ EM G P ++TY +++D + ++E+ LF + K I +
Sbjct: 492 KSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQV 551
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLID K+G+VD A + EEM
Sbjct: 552 IYSSLIDGFGKVGRVDEAYLVMEEM 576
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 131/272 (48%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ + KAG L + ++ + FLP+ +Y+ ++ + + ++++ +
Sbjct: 414 NTYMDCVFKAGETEKGRALFEEIKARG-FLPDTRSYSILIHSLVKAGFARETYELYYAMK 472
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + Y F + + +EE+ + +++ ++ AK +++
Sbjct: 473 DQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLD 532
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++F+ K + + + Y+ ++D G+VGRV++ M + G+ P+ ++N LL
Sbjct: 533 EAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLL 592
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ L+ F+ M + P+ +TY LI+ + ++ + +M++Q ++
Sbjct: 593 DGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLK 652
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ Y ++I L K G V A ++FE +S
Sbjct: 653 PNTITYTAMISGLAKSGNVAQASSLFERFRAS 684
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 4/264 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G V A + ++ N +P+ Y ++ + N +D + +I + + + + +
Sbjct: 143 KVGKVDMAWKFFHEMK-ANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCA 201
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + + +E S++ N I+ K + +KAL IF+
Sbjct: 202 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE 261
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+K P+L TYNI++ +L + G V +MKEAG+ P+ + N +++ L K ++
Sbjct: 262 MK-RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQK 320
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
LD F M PD T+ +LID G+ G ++++ R++ M P++ VY S
Sbjct: 321 LDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTS 380
Query: 249 LIDNLKKMGKVDLAMTIFEEMNSS 272
LI N K + + +++EM S
Sbjct: 381 LIRNFFKCDRKEDGHKMYKEMMRS 404
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK+G V+ A +LL+ ++ P Y V+ A+ + +D ++ + ++
Sbjct: 484 NTVIDGFCKSGKVNKAYQLLEEMKTMG-HHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 542
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L+ Y++ F + + +EE++Q ++ N ++ K+ +I
Sbjct: 543 SNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEIN 602
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL+ F +K LKC P+ ITY I+++ L +V + N + M++ G+ P+ I+Y ++
Sbjct: 603 EALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMI 662
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + F SG PD +Y A+I+ ++ +LF + + +
Sbjct: 663 SGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCS 722
Query: 241 PSIYVYRSLIDNLKK 255
+L+D L K
Sbjct: 723 IHTKTCVALLDALHK 737
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 22/257 (8%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD--------LLV 61
AG A LL+ R K +P+ AYNC+L + D + +I ++ L
Sbjct: 214 AGKFDEAYSLLERQRAKGC-IPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPT 272
Query: 62 SSRTLSSDCYT-NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + C N AF + D + +F ++ +N +I K+++++
Sbjct: 273 YNIIIGMLCKAGNVEAAFKVRDAMKEAGLF----------PNVRTINIMIDRLCKAQKLD 322
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IF+ + C PD T+ ++D LG+ GRV+D + M +A +P+ + Y +L+
Sbjct: 323 EACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI 382
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K R + ++EM SG PDL+ +D + G E+ LF ++K +
Sbjct: 383 RNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFL 442
Query: 241 PSIYVYRSLIDNLKKMG 257
P Y LI +L K G
Sbjct: 443 PDTRSYSILIHSLVKAG 459
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 122/264 (46%), Gaps = 2/264 (0%)
Query: 9 LCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCKA + AV + + + +++ + AYN +++ D ++ +L+ S
Sbjct: 176 LCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPS 235
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + L EE+ + A P ++ N II K+ +E A + D
Sbjct: 236 VVAYNCILTCLGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRD 294
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K P++ T NI++D L + ++++ + F M PD ++ +L++ L K
Sbjct: 295 AMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQG 354
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R+D + M ++ P+++ YT+LI +F + E+ +++ +M + P + +
Sbjct: 355 RVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLN 414
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
+ +D + K G+ + +FEE+ +
Sbjct: 415 TYMDCVFKAGETEKGRALFEEIKA 438
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ + KSR++ +A + ++ K +P Y ++ L VG + ML F M+E G
Sbjct: 32 LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ TL+ + R+D L EM + D++ Y ID FG+ G ++ +
Sbjct: 92 YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ F++MK + P Y S++ L K ++D A+ IFE+M +
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQN 195
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
M AG P + L+ + K R+L + M +P YT LI +
Sbjct: 14 LGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSE 73
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
G + L LFN M++ ++++ +LI + G+VD A+++ +EM S+ D
Sbjct: 74 VGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFD 128
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 136/280 (48%), Gaps = 6/280 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ L K+G+V A L + + + + YN ++ + D + ++ +++L S+
Sbjct: 201 IDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREML--SK 258
Query: 65 TLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
L D +T+ + ++ +E + + + N +I KS+++++A
Sbjct: 259 GLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEA 318
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
IF ++ PD+ T+N ++D L + GR++D MK AG PD YNTL++
Sbjct: 319 WEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDG 378
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
LRK R++ EM G +PD++TY LID + G IE++LRLF ++ + +
Sbjct: 379 LRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANT 438
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+ Y ++++ L G+VD A +F M D DF
Sbjct: 439 V-TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDF 477
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 91/160 (56%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+A + +EK++ ++G +C YN ++D + G L + M ++G+ P
Sbjct: 63 GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D ++N L+N +K +R+D F EM P+++TY+ LID+ + G +E++L++F
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
DMK + RP+I+ Y S+ID L K G VD A +FEEM S
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTS 222
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 140/274 (51%), Gaps = 15/274 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDL-- 59
I+ +CK G V A+++ ++ + NIF Y ++ ++ +D +F + +++
Sbjct: 166 IDAVCKCGGVEKALKVFLDMKSRGCRPNIF---TYTSMIDGLGKSGHVDKAFFLFEEMTS 222
Query: 60 --LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
LV++R + + R+ D +L F E + + P+ + + +++ +
Sbjct: 223 EGLVATRVVYNSLIHGLGRSG-RADAAAKL--FREMLSKGLQPDHVTFTS-LVYGLGVAG 278
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ +A IF + + C D+ YN+++D L + R+++ F ++E G+VPD ++N
Sbjct: 279 RASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFN 338
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L K R+ I +M +G PD+ Y LID ++G +EE+ +L +M+
Sbjct: 339 ALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSL 398
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y +LID K G+++ A+ +FEE+++
Sbjct: 399 GYEPDVVTYNTLIDESCKGGRIEDALRLFEEISA 432
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 7/265 (2%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
KA V + +L + ++++N PN Y+ ++ A + ++ + ++ D+ SR
Sbjct: 136 KAKRVDSVWKLFEEMQNQNCS-PNVITYSILIDAVCKCGGVEKALKVFLDM--KSRGCRP 192
Query: 69 D--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ YT+ + + EE+ + +V N +I +S + + A +F
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLF 252
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ +PD +T+ ++ LG GR ++ F ++ G D YN L++ L K
Sbjct: 253 REMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKS 312
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+RLD F E+ E G+ PD+ T+ AL+D ++G I ++ L DMK+ P + VY
Sbjct: 313 KRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVY 372
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+LID L+K G+V+ A + EM S
Sbjct: 373 NTLIDGLRKSGRVEEAGQLLLEMQS 397
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 9/244 (3%)
Query: 35 AYNCVLVASAETNDIDL---SFQILKDLLV----SSRTLSSDCYT--NFARAFIMTDDCT 85
+ C L ASA + ID + K L V L D YT AF
Sbjct: 82 GHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVD 141
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ EE+ ++I + +I A K +EKAL +F +K C+P++ TY ++
Sbjct: 142 SVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMI 201
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
D LG+ G V+ F M G+V + YN+L++ L + R D FREM G++
Sbjct: 202 DGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQ 261
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD +T+T+L+ G G E+ R+F + + + +Y LID L K ++D A I
Sbjct: 262 PDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEI 321
Query: 266 FEEM 269
F E+
Sbjct: 322 FGEL 325
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 93/165 (56%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I AF K+ +KAL ++ + +PD T+N++++ + RV+ + F M+
Sbjct: 93 NSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQN 152
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
P+ I+Y+ L++ + K ++ L F +M G +P++ TYT++ID G++G++++
Sbjct: 153 QNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDK 212
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ LF +M + + + VY SLI L + G+ D A +F EM S
Sbjct: 213 AFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLS 257
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 41/259 (15%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
AG S A R+ Q RD L N YN ++ ++ +D +++I +L L D
Sbjct: 277 AGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGEL--EEDGLVPDV 334
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT N ++ KS +I A ++ +K
Sbjct: 335 YT---------------------------------FNALMDGLCKSGRIHDAFILLGDMK 361
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C PD+ YN ++D L + GRV + M+ G PD ++YNTL++ K R++
Sbjct: 362 RAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIE 421
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ----IRPSIYVY 246
L F E+ G + +TY +++ G ++E+ +LFN MKQ+ I P Y
Sbjct: 422 DALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTY 480
Query: 247 RSLIDNLKKMGKVDLAMTI 265
+L++ ++ G +LA ++
Sbjct: 481 TTLLNGARQAGLSELANSL 499
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 98/166 (59%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I+ N + A + +QI +++ +K PD+ TYNI++ GR G+V + + F
Sbjct: 285 IMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEE 344
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ + PD ISYN+L+N L K LD I FREM E G+ PD++TY+ LI+ FG+T
Sbjct: 345 LENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDK 404
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E + RLF++M + P+I Y L+D L++ G+ A+ ++ ++
Sbjct: 405 VEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAKL 450
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLL 60
C +E LC AG A+ LL + +K I YN V A I + +
Sbjct: 252 CLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLY---- 307
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASP-ESIIVVNRIIFAFAKSRQI 119
E +++ P I N +I +F ++ ++
Sbjct: 308 --------------------------------EKMKLDGPLPDIFTYNILISSFGRAGKV 335
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A+ IF+ ++ CKPD+I+YN +++ LG+ G +++ F M+E G+ PD ++Y+TL
Sbjct: 336 YEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTL 395
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ K ++++ F EM G P+++TY L+D R+G E++ L+ +KQQ +
Sbjct: 396 IECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGL 455
Query: 240 RPSIYVYRSL 249
P Y L
Sbjct: 456 TPDSITYSVL 465
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
H KG+ D I YN V LGR+ +++ + + + MK G +PD +YN L+++ +
Sbjct: 276 HEKGIN--TDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAG 333
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
++ + F E+ S KPD+++Y +LI+ G+ G+++E+ F +M+++ + P + Y
Sbjct: 334 KVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYS 393
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+LI+ K KV++A +F+EM
Sbjct: 394 TLIECFGKTDKVEMACRLFDEM 415
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N ++ A AK +++++A +F+ +K C+PD TY I++ + GR+G++++ L F
Sbjct: 77 IFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFE 136
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G P+ I+YNT++ L R +D ++ F +M E +P+ TY+ ++ G
Sbjct: 137 EMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEG 196
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + L ++ ++ + SIY Y L+ L K+G A +F M S
Sbjct: 197 QLHK-LDKVVELSRKYMNRSIYAY--LVRTLNKLGHASEAHRLFCNMWS 242
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 20/268 (7%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+ G + ++ L + + +K PN AYN ++ A A + +D K +L+ S+ +
Sbjct: 124 RIGKLDESLALFEEMLNKGCS-PNLIAYNTMIQALANSRMVD------KTILLFSKMMEK 176
Query: 69 DCYTN-FARAFIMTDDCTQ-LLIFIEEVVQIASPESIIVVNRIIFAF-----AKSRQIEK 121
+C N F + I+T + L +++VV+++ +NR I+A+ K +
Sbjct: 177 NCRPNEFTYSVILTLLAAEGQLHKLDKVVELSRK----YMNRSIYAYLVRTLNKLGHASE 232
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F ++ + D +L+ L G+ + ++ + E G+ D I YNT+
Sbjct: 233 AHRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFT 292
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L +++++ + +M G PD+ TY LI SFGR G + E++++F +++ +P
Sbjct: 293 ALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKP 352
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I Y SLI+ L K G +D A F EM
Sbjct: 353 DIISYNSLINCLGKNGDLDEAHIRFREM 380
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 40/274 (14%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
A+N +L A A+ +D +F++ +D+ YT R + L EE+
Sbjct: 79 AFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEM 138
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ ++I N +I A A SR ++K +L+F + C+P+ TY+++L +L G++
Sbjct: 139 LNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQL 198
Query: 155 NDM----------------------LNEFASMKEAG-VVPDFISYN-------------T 178
+ + LN+ EA + + SY+ +
Sbjct: 199 HKLDKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLES 258
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L N + + +DL ++ E GI D + Y + + GR I L+ MK
Sbjct: 259 LCNAGKTVEAIDL----LGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDG 314
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I+ Y LI + + GKV A+ IFEE+ +S
Sbjct: 315 PLPDIFTYNILISSFGRAGKVYEAIKIFEELENS 348
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I VN +I F +E+ + + I+ K + TY ++ R ++ +
Sbjct: 9 TISTVNILIGFFGDGEDLERCIGL---IEKWDLKMNGYTYKCLVQAYLRSCDSDNGFRVY 65
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK G D ++N LL+ L K +++D F +M + +PD TYT +I GR
Sbjct: 66 LEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRI 125
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++ESL LF +M + P++ Y ++I L VD + +F +M
Sbjct: 126 GKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKM 173
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 75/151 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A+ +S + ++ +K D+ +N++LD L + +V+ F MK+
Sbjct: 48 LVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKH 107
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD +Y ++ +I +LD L F EM G P+L+ Y +I + + +++++
Sbjct: 108 CEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTI 167
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
LF+ M ++ RP+ + Y ++ L G++
Sbjct: 168 LLFSKMMEKNCRPNEFTYSVILTLLAAEGQL 198
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L G L + ++ P+ Y+ ++ A + D + ++L ++
Sbjct: 198 NSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMK 257
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT F D+ L EE+ + + +I K+ +I+
Sbjct: 258 ENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRID 317
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + ++ CKPD + N +++ LG+ GR++D L F M + +P+ ++YNT++
Sbjct: 318 EAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTII 377
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R+ +F M SGI P TY+ LID F +T IE+++ L +M ++
Sbjct: 378 KALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGF 437
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLID L K + DLA +F+E+
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQEL 467
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETND-IDLSFQILKDL 59
N I L KAG + ++L + + + +PN YN ++ A E+ + F + +
Sbjct: 339 NNMINFLGKAGRLDDGLKLFEEMGVSHC-IPNVVTYNTIIKALFESKSRVSEVFSWFERM 397
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + S Y+ F T+ + ++ +EE+ + P +I A K+++
Sbjct: 398 KGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 457
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A +F +K Y +++ LG+ GR++D +N F M + G P+ +YN L
Sbjct: 458 DLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNAL 517
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L + LD L R+M E G PD+ +Y +++ +TG ++ + +MK I
Sbjct: 518 MSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTI 577
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P Y +++ L G + A + +EMN+
Sbjct: 578 KPDAVSYNTVLSALSHAGMFEEAAELMKEMNA 609
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV---VNRIIFAFAKSRQIEKALL 124
+ Y + + ++ I+E+V+ SP ++ ++++I ++ I KA+
Sbjct: 123 TSTYMALIHCLELVEQYGEMWKMIQEMVR--SPICVVTPMELSQVIRMLGNAKMIGKAIT 180
Query: 125 IFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
IF IK KC+P YN ++ +L G+ +V+++ NE ++ E PD ++Y+ L++
Sbjct: 181 IFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN--EGHCHPDTVTYSALIS 238
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ R D + EM E+G++P YT +I F + N+ +L LF +M+ RP
Sbjct: 239 AFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRP 298
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ Y LI L K G++D A + EM
Sbjct: 299 DVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II F K + AL +F+ ++ + C+PD+ TY ++ LG+ GR+++ + + M+
Sbjct: 271 IISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQRED 330
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS-FGRTGNIEES 227
PD + N ++N L K RLD L F EMG S P+++TY +I + F + E
Sbjct: 331 CKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV 390
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
F MK I PS + Y LID K +++ AM + EEM+
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMD 433
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 39/256 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK + A+ LL+ + +K P AY ++ A + DL+ ++ ++L
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL----- 467
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+C ++ AR + + +I K+ +++ A+
Sbjct: 468 --KENCGSSSARVYAV----------------------------MIKHLGKAGRLDDAIN 497
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD + L C P++ YN ++ L R +++ L M+E G +PD SYN +LN L
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLA 557
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + M S IKPD ++Y ++ + G EE+ L +M +
Sbjct: 558 KTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLI 617
Query: 245 VYRSLIDNLKKMGKVD 260
Y S+ L+ +GKVD
Sbjct: 618 TYSSI---LEAIGKVD 630
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I AF K + + A+ + + +K +P Y +++ + ++ V+ L+ F
Sbjct: 231 VTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEE 290
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ PD +Y L+ L K R+D ++ EM KPD + +I+ G+ G
Sbjct: 291 MRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGR 350
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
+++ L+LF +M P++ Y ++I L + +V + FE M S
Sbjct: 351 LDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGS 400
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 10/273 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKN-----IFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
I L KAG + A ++ ++ + + N N + + +D ++ +++
Sbjct: 307 IRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFL----GKAGRLDDGLKLFEEMG 362
Query: 61 VSSRTLSSDCYTNFARA-FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
VS + Y +A F +++ + E + S + +I F K+ +I
Sbjct: 363 VSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRI 422
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKA+++ + + P Y ++D LG+ R + F +KE Y +
Sbjct: 423 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 482
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ +L K RLD + F EM + G P++ Y AL+ R ++E+L M++
Sbjct: 483 IKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGC 542
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I Y +++ L K G AM + M +S
Sbjct: 543 LPDINSYNIILNGLAKTGGPHRAMEMLTNMKNS 575
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNA---YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C A V+ L L+ K LP A +N ++ A N I ++ L D L + +
Sbjct: 354 CSANVVTYTALLHAYLKAKQ--LPQASDIFNRMIDAGCPPNTI--TYSALVDGLCKAGEI 409
Query: 67 SSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
C YT I T D + E + +++ +I K+ ++ A
Sbjct: 410 QKACEVYTKL----IGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 465
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + C+P+ I Y+ ++D +VG++++ F M + G +P +Y +L++ +
Sbjct: 466 LLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMF 525
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K RRLDL + +M ES P+++TYTA+ID R G +++L+L + M+++ P++
Sbjct: 526 KDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVV 585
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LID L K GKVDL++ +F +M++
Sbjct: 586 TYTALIDGLGKSGKVDLSLQLFIQMST 612
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 27/295 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRD---------KNIFLPNAYNCVLVASAETNDIDLSF 53
N + C A + A +LL+ + D NIF+ + + S + + L+
Sbjct: 181 NSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDL--LALAE 238
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
++ +++L SS L+ NFAR I+ ++ +++I
Sbjct: 239 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFL 298
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
++ ++EKA L+F +K + PD+ TY I++D + G + + F M+ G +
Sbjct: 299 CEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANV 358
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++Y LL+ K ++L F M ++G P+ +TY+AL+D + G I+++ ++
Sbjct: 359 VTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTK 418
Query: 234 M----------------KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ I P++ Y +LID L K KV A + + M S+
Sbjct: 419 LIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSN 473
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ +I A K R+++ A+ + + C P+++TY ++D L R+G L
Sbjct: 513 TVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLL 572
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+E G P+ ++Y L++ L K ++DL L F +M G P+ +TY LI+
Sbjct: 573 SMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAA 632
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G ++E+ L ++MKQ + Y S++ K K ++ + EE+ S
Sbjct: 633 GLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELES 680
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 5/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKA V A LL ++ N PN Y+ ++ + ID + ++ +
Sbjct: 451 IDGLCKAHKVVDAQELLDAMLS-NGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT+ A + + ++V+ + +++ +I + + +KAL
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ C P+++TY ++D LG+ G+V+ L F M G P++++Y L+N+
Sbjct: 570 KLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHC 629
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
LD EM ++ L Y +++ F + SL L +++ P
Sbjct: 630 CAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIA 687
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY LIDN K G+++ A+ + +EM
Sbjct: 688 PVYGLLIDNFSKAGRLEEALELHKEM 713
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDD--CTQLLIF 90
P+ +N ++ + D ++++LK + Y F + ++ LL
Sbjct: 177 PSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLAL 236
Query: 91 IEEVVQ--IASPESIIVVNRIIFA--FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
E+V + +AS + VN FA + + A I + G PD TY+ V+
Sbjct: 237 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVIT 296
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L +V F MK GV PD +Y L+++ K ++ +F EM G
Sbjct: 297 FLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSA 356
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+++TYTAL+ ++ + + ++ +FN M P+ Y +L+D L K G++ A ++
Sbjct: 357 NVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVY 416
Query: 267 EEM 269
++
Sbjct: 417 TKL 419
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/313 (18%), Positives = 116/313 (37%), Gaps = 81/313 (25%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE-EV 94
YN ++ A +D+ F++ K++ S + FA+A + L+ IE E
Sbjct: 43 YNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIERED 102
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL------DIL 148
++ + ++ ++I ++ ++A+ ++ C P+++TY +L L
Sbjct: 103 FKLDT----VLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQL 158
Query: 149 GRVGRV----------------NDMLNEFAS-------------MKEAGVVPDFISYNTL 179
G R+ N +++ + + M + G P +++YN
Sbjct: 159 GWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIF 218
Query: 180 LNN-----------------------------------------LRKIRRLDLCLIYFRE 198
+ + L + + D+ +
Sbjct: 219 IGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKV 278
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M G PD TY+ +I +E++ LF +MK + P +Y Y LID+ K G
Sbjct: 279 MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGL 338
Query: 259 VDLAMTIFEEMNS 271
++ A + F+EM S
Sbjct: 339 IEQARSWFDEMRS 351
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 96/172 (55%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ + N ++ A K Q++ A I + + P++++Y+ V+D + GR ++ LN
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M+ G+ D +SYNTLL+ K+ R + L REM GIK D++TY AL+ +G+
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G +E ++F +MK++ + P++ Y +LID K G AM IF E S+
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 92/167 (55%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ + +I FAK+ + ++AL +F ++ L D ++YN +L I +VGR + L+
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G+ D ++YN LL K + D F EM + P+LLTY+ LID + + G
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++ +F + K +R + +Y +LID L K G V A+++ +EM
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 8/257 (3%)
Query: 9 LCKAGNVSAAVR-----LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSS 63
+C G + A R + ++++F +YN +L A + +DL+F+IL + V
Sbjct: 348 VCSRGGLWEAARNLFDEMTNRRIEQDVF---SYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ F + L E+ + + N ++ + K + E+AL
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + K D++TYN +L G+ G+ +++ F MK V+P+ ++Y+TL++
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + FRE +G++ D++ Y+ALID+ + G + ++ L ++M ++ I P++
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 244 YVYRSLIDNLKKMGKVD 260
Y S+ID + +D
Sbjct: 585 VTYNSIIDAFGRSATMD 601
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNE 160
++ + +I A+ +S E+A+ +F+ +K +P+L+TYN V+D G+ G +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M+ GV PD I++N+LL + + F EM I+ D+ +Y L+D+ +
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++ + + M ++I P++ Y ++ID K G+ D A+ +F EM
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 106/227 (46%), Gaps = 3/227 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G + A +L + K I +PN +Y+ V+ A+ D + + ++
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRI-MPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y + + L + E+ + + ++ N ++ + K + +
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F +K P+L+TY+ ++D + G + + F K AG+ D + Y+ L+
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ L K + + EM + GI P+++TY ++ID+FGR+ ++ S
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++ LGR G+V F + G +++ L++ + + + F M E G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 204 IKPDLLTYTALIDSFGRTG-NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
++P+L+TY A+ID+ G+ G ++ + F++M++ ++P + SL+ + G + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 263 MTIFEEM 269
+F+EM
Sbjct: 359 RNLFDEM 365
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ +++ L + ++ + F G + ++ALI ++GR+G EE++ +FN MK+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 237 QQIRPSIYVYRSLIDNLKKMG-KVDLAMTIFEEM 269
+RP++ Y ++ID K G + F+EM
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 27/158 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN------- 155
+++ + +I A K+ + A+ + D + P+++TYN ++D GR ++
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Query: 156 --------DMLNEFASMKEAGVVPDFISYNTLLNNL------RKIRRLDLCLIYFREMGE 201
L+ + V+ F T NN ++ L L FR+M +
Sbjct: 609 GGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQ 668
Query: 202 SGIKPDLLTYTALIDSFGRTGNIE------ESLRLFND 233
IKP+++T++A++++ R + E E LRLF++
Sbjct: 669 LEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 706
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 128/264 (48%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + +++ + L AYN V+ ++ +D +++ L+++ V
Sbjct: 66 IHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHV 125
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE ++IV + +I F K +I++A L
Sbjct: 126 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 185
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N ++D L + +N+ L F SMKE P+ +Y+ L+N L
Sbjct: 186 ILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLC 245
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++++ + ++++EM + G+ P+++TYT +I + GNI ++ LF K P
Sbjct: 246 RVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAA 305
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
+ +LI+ + + A +FEE
Sbjct: 306 SFNALIEGMSHANRAIEAYHVFEE 329
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 133/265 (50%), Gaps = 3/265 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N ++ CK+G V A L+ ++ K++ A Y ++ A+ + +D ++ + ++
Sbjct: 98 NAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 157
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L+ Y++ F + + +EE+++ ++ N ++ A K+ +I +
Sbjct: 158 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINE 217
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL+ F +K +KC P+ TY+I+++ L RV + N + M++ G+VP+ ++Y T+++
Sbjct: 218 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIS 277
Query: 182 NLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K+ + D C ++ R GI PD ++ ALI+ E+ +F + + + R
Sbjct: 278 GLAKVGNITDACSLFERFKANGGI-PDAASFNALIEGMSHANRAIEAYHVFEETRLRGCR 336
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTI 265
++ SL+D L K ++ A +
Sbjct: 337 INVKACISLLDALNKAECIEQAAVV 361
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 134/279 (48%), Gaps = 5/279 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ + KAG+V + + ++ FLP+ +Y+ ++ + + I +
Sbjct: 28 NTYMDCVFKAGDVEKGRAIFEDIKGYG-FLPDVRSYSILIHGLTKAGQARETSSIFHAMK 86
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + Y F + + +EE+ P ++ II AK +++
Sbjct: 87 QRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLD 146
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++F+ K + ++I Y+ ++D G+VGR+++ M + G+ P+ ++N+L+
Sbjct: 147 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLM 206
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ LI F+ M E P+ TY+ LI+ R ++ + +M++Q +
Sbjct: 207 DALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLV 266
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE--EMNSSLSDLA 277
P++ Y ++I L K+G + A ++FE + N + D A
Sbjct: 267 PNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAA 305
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E IF + C+PDL N +D + + G V F +K G +PD SY+ L
Sbjct: 6 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 65
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K + F M + G D Y A++D F ++G ++++ +MK + +
Sbjct: 66 IHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHV 125
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P++ Y S+ID L K+ ++D A +FEE S
Sbjct: 126 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 157
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GR D F M G PD NT ++ + K ++ F ++ G PD+ +Y
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LI + G E+ +F+ MKQ+ Y +++D K GKVD A EEM
Sbjct: 63 SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM 120
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L G L + + P+ Y+ ++ A + D + Q+L ++
Sbjct: 198 NSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMK 257
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT F DD L EE+ + +I K+ +I+
Sbjct: 258 ENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRID 317
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A F ++ C+PD + N +++ LG+ GR++D + F M +P ++YNT++
Sbjct: 318 EAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTII 377
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R +F M ESGI P TY+ LID F +T +E+++ L +M ++
Sbjct: 378 KALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF 437
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y SLID L K + DLA +F+E+ +
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 134/275 (48%), Gaps = 10/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAET----NDIDLSFQIL 56
N I L KAG + A++L Q + +P+ YN ++ A E+ +++ F+ +
Sbjct: 339 NNMINFLGKAGRLDDAMKLFQEMGTLRC-IPSVVTYNTIIKALFESKSRASEVPSWFERM 397
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K+ +S SS Y+ F T+ + ++ +EE+ + P +I A K+
Sbjct: 398 KESGISP---SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ + A +F +K Y +++ LG+ GR++D +N F M + G PD +Y
Sbjct: 455 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 514
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ L + LD L R M E G PD+ +Y +++ +TG ++ + ++MKQ
Sbjct: 515 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 574
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+RP + Y +++ L G + A + EEMN+
Sbjct: 575 STVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNT 609
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 12/210 (5%)
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQ----IASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y R + + ++ I+E+V+ + +P + V R++ ++ + KA+
Sbjct: 123 TSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRML---GNAKMVSKAI 179
Query: 124 LIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
IF IK KC+P YN ++ +L G+ G+V+++ NE ++ E PD ++Y+ L+
Sbjct: 180 AIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMST--EGHCFPDTMTYSALI 237
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K+ R D EM E+G++P YT LI F + ++ +L LF +M+ Q R
Sbjct: 238 SAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCR 297
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P ++ Y LI L K G++D A F EM
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFFYEMQ 327
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 39/260 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK + A+ LL+ + +K P AY ++ A + DL+ ++ ++L
Sbjct: 413 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL----- 467
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+C ++ AR + + +I K+ +++ A+
Sbjct: 468 --KENCGSSSARVYAV----------------------------MIKHLGKAGRLDDAIN 497
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD + L C PD+ YN ++ L R G +++ L+ M+E G +PD SYN +LN L
Sbjct: 498 MFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLA 557
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + M +S ++PD+++Y ++ + G EE+ +L +M +
Sbjct: 558 KTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLI 617
Query: 245 VYRSLIDNLKKMGKVDLAMT 264
Y S+ L+ +GKVD T
Sbjct: 618 TYSSI---LEAIGKVDHEYT 634
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 18/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLL-----QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL- 59
I L KAG + A + R + + N N L + +D FQ + L
Sbjct: 307 IRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMIN-FLGKAGRLDDAMKLFQEMGTLR 365
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+V+ T+ + + +RA +++ + E + + S + +I F K
Sbjct: 366 CIPSVVTYNTIIKALFESKSRA-------SEVPSWFERMKESGISPSSFTYSILIDGFCK 418
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ ++EKA+++ + + P Y ++D LG+ R + F +KE
Sbjct: 419 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 478
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y ++ +L K RLD + F EM + G PD+ Y AL+ RTG ++E+L M+
Sbjct: 479 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 538
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y +++ L K G AM + M S
Sbjct: 539 EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 575
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L G L + ++ P+ Y+ ++ A + D + ++L ++
Sbjct: 198 NSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMK 257
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT F D+ L EE+ + + +I K+ +I+
Sbjct: 258 ENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRID 317
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + ++ CKPD + N +++ LG+ GR++D L F M + +P+ ++YNT++
Sbjct: 318 EAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTII 377
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R+ +F M SGI P TY+ LID F +T IE+++ L +M ++
Sbjct: 378 KALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGF 437
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLID L K + DLA +F+E+
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQEL 467
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II F K + AL +F+ ++ + C+PD+ TY ++ LG+ GR+++ + + M+ G
Sbjct: 271 IISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREG 330
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS-FGRTGNIEES 227
PD + N ++N L K RLD L F EMG S P+++TY +I + F + E
Sbjct: 331 CKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV 390
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
F MK I PS + Y LID K +++ AM + EEM+
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMD 433
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETND-IDLSFQILKDL 59
N I L KAG + ++L + + + +PN YN ++ A E+ + F + +
Sbjct: 339 NNMINFLGKAGRLDDGLKLFEEMGVSHC-IPNVVTYNTIIKALFESKSRVSEVFSWFERM 397
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + S Y+ F T+ + ++ +EE+ + P +I A K+++
Sbjct: 398 KGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 457
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A +F +K Y +++ LG+ GR++D +N F M + G P+ +YN L
Sbjct: 458 DLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNAL 517
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L + LD L R+M E G PD+ +Y +++ +TG ++ + +MK I
Sbjct: 518 MSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTI 577
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P Y +++ L G + A + +EMN+
Sbjct: 578 KPDAVSYNTVLSALSHAGMFEEAAELMKEMNA 609
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV---VNRIIFAFAKSRQIEKALL 124
+ Y + + ++ I+E+V+ SP ++ ++++I ++ I KA+
Sbjct: 123 TSTYMALIHCLELVEQYGEMWKMIQEMVR--SPICVVTPMELSQVIRMLGNAKMIGKAIT 180
Query: 125 IFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
IF IK KC+P YN ++ +L G+ +V+++ NE ++ E PD ++Y+ L++
Sbjct: 181 IFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN--EGHCQPDTVTYSALIS 238
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ R D + EM E+G++P YT +I F + N+ +L LF +M+ RP
Sbjct: 239 AFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRP 298
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ Y LI L K G++D A + EM
Sbjct: 299 DVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 39/256 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK + A+ LL+ + +K P AY ++ A + DL+ ++ ++L
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL----- 467
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+C ++ AR + + +I K+ +++ A+
Sbjct: 468 --KENCGSSSARVYAV----------------------------MIKHLGKAGRLDDAIN 497
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD + L C P++ YN ++ L R +++ L M+E G +PD SYN +LN L
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLA 557
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + M S IKPD ++Y ++ + G EE+ L +M +
Sbjct: 558 KTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLI 617
Query: 245 VYRSLIDNLKKMGKVD 260
Y S+ L+ +GKVD
Sbjct: 618 TYSSI---LEAIGKVD 630
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I AF K + + A+ + + +K +P Y +++ + ++ V+ L+ F
Sbjct: 231 VTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEE 290
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ PD +Y L+ L K R+D ++ EM G KPD + +I+ G+ G
Sbjct: 291 MRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGR 350
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
+++ L+LF +M P++ Y ++I L + +V + FE M S
Sbjct: 351 LDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGS 400
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 10/273 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKN-----IFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
I L KAG + A ++ + + + N N + + +D ++ +++
Sbjct: 307 IRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFL----GKAGRLDDGLKLFEEMG 362
Query: 61 VSSRTLSSDCYTNFARA-FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
VS + Y +A F +++ + E + S + +I F K+ +I
Sbjct: 363 VSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRI 422
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKA+++ + + P Y ++D LG+ R + F +KE Y +
Sbjct: 423 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 482
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ +L K RLD + F EM + G P++ Y AL+ R ++E+L M++
Sbjct: 483 IKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGC 542
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I Y +++ L K G AM + M +S
Sbjct: 543 LPDINSYNIILNGLAKTGGPHRAMEMLTNMKNS 575
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L K G +L ++++ + L AYN V+ ++ ++ ++Q+L+++
Sbjct: 593 IHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGL 652
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE A +++V + +I F K +I++A L
Sbjct: 653 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYL 712
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P+ T+N +LD L + +++ L F +MK P+ ++Y+ ++N L
Sbjct: 713 ILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLC 772
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K+R+ + ++++EM + G+KP+ +TYT +I R GN+ E+ LF K P
Sbjct: 773 KVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSA 832
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
Y ++I+ L K A +FEE
Sbjct: 833 CYNAMIEGLSNANKAMDAYILFEE 856
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 132/266 (49%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
I++LCKA + A + L D + P++ C L+ ++ ++ + + +L S
Sbjct: 453 IDRLCKAQRLDEACSIFLGL-DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+T ++ YT+ R F +E++ ++++N + K+ +IEK
Sbjct: 512 QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGR 571
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ IK PD+ +Y+I++ L + G D F MKE G+ D +YN +++
Sbjct: 572 ALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGF 631
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +++ EM G++P ++TY ++ID + ++E+ LF + K + + ++
Sbjct: 632 CKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNV 691
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLID K+G++D A I EE+
Sbjct: 692 VVYSSLIDGFGKVGRIDEAYLILEEL 717
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 26 RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL------------------LVSSRTL- 66
+ K + P AYN +L+ A T +++ QIL+++ V SR L
Sbjct: 125 KTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLR 184
Query: 67 ----------------SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
+ YT A + +L + ++ +I ++ + +I
Sbjct: 185 EAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
FA+ +++ AL + D +K DL+ YN+ +D G+VG+V+ F +K G+V
Sbjct: 245 CVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLV 304
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD +++ +++ L K R+D + F E+ + P + Y +I +G G E+ L
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL 364
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
K++ PS+ Y ++ L + GKV+ A+ I E M
Sbjct: 365 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKAG + AA+++ S+++ +F PN N ++ + +D + I L
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLF-PNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV 476
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T S + + + E+++ + +V +I F K + E
Sbjct: 477 CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH 536
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I+ + C PDL+ N +D + + G + F +K G+ PD SY+ L++ L
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K F EM E G+ D Y +ID F ++G + ++ +L +MK + ++P++
Sbjct: 597 VKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTV 656
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
Y S+ID L K+ ++D A +FEE S DL
Sbjct: 657 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDL 689
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 16/265 (6%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + A LL+ + K +P+ AYNC+L ++ + +IL+ + D
Sbjct: 356 GKFNEAYSLLERQKRKGC-IPSVIAYNCILTCLGRKGKVEEALRILE-------AMKMDA 407
Query: 71 YTNFARAFIMTDD-CTQLLIFIEEVVQIASPES-----IIVVNRIIFAFAKSRQIEKALL 124
N I+ D C + VQ + E+ II VN +I K++++++A
Sbjct: 408 APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACS 467
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF + C PD +T+ ++D LGR G+VND + M ++G P+ + Y +L+ N
Sbjct: 468 IFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFF 527
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K R + ++EM G PDL+ +D + G IE+ LF ++K Q + P +
Sbjct: 528 KCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVR 587
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI L K G +F EM
Sbjct: 588 SYSILIHGLVKGGFSKDTYKLFYEM 612
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 8/263 (3%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA----YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
+ G V AA+ LL ++ + NA YN + + +D++++ +L
Sbjct: 249 REGRVDAALSLLDEMKSNSF---NADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVP 305
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+T+ + + + EE+ S + N +I + + +A +
Sbjct: 306 DDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLL 365
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ K C P +I YN +L LGR G+V + L +MK P+ SYN L++ L K
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKA 424
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
L+ L M E+G+ P+++T +ID + ++E+ +F + + P +
Sbjct: 425 GELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTF 484
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
SLID L + GKV+ A ++E+M
Sbjct: 485 CSLIDGLGRHGKVNDAYMLYEKM 507
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 124/252 (49%), Gaps = 3/252 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK+G V+ A +LL+ ++ K + P Y V+ A+ + +D ++ + ++ +
Sbjct: 628 IDGFCKSGKVNKAYQLLEEMKTKGL-QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKA 686
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L+ Y++ F + + +EE++Q + N ++ A K+ +I++AL
Sbjct: 687 VDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEAL 746
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ F ++K LKC P+ +TY+I+++ L +V + N + M++ G+ P+ I+Y T+++ L
Sbjct: 747 VCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGL 806
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ + F SG PD Y A+I+ ++ LF + + + R
Sbjct: 807 ARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYS 866
Query: 244 YVYRSLIDNLKK 255
L+D L K
Sbjct: 867 KTCVVLLDALHK 878
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 130/265 (49%), Gaps = 4/265 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCKA V AV L + L D N +P AYN +++ + ++ +L+
Sbjct: 317 LCKAERVDEAVELFEEL-DSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIP 375
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + L +E + A+P ++ N +I K+ ++E AL +
Sbjct: 376 SVIAYNCILTCLGRKGKVEEALRILEAMKMDAAP-NLTSYNILIDMLCKAGELEAALKVQ 434
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D +K P++IT NI++D L + R+++ + F + PD +++ +L++ L +
Sbjct: 435 DSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRH 494
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+++ + + +M +SG P+ + YT+LI +F + G E+ +++ +M + P + +
Sbjct: 495 GKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLL 554
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +D + K G+++ +FEE+ +
Sbjct: 555 NNYMDCVFKAGEIEKGRALFEEIKA 579
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 130/272 (47%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ + KAG + L + ++ + + P+ +Y+ ++ + ++++ ++
Sbjct: 555 NNYMDCVFKAGEIEKGRALFEEIKAQGL-TPDVRSYSILIHGLVKGGFSKDTYKLFYEMK 613
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + Y F + + +EE+ +++ +I AK +++
Sbjct: 614 EQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLD 673
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++F+ K +++ Y+ ++D G+VGR+++ + + G+ P+ ++N LL
Sbjct: 674 EAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLL 733
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K +D L+ F+ M P+ +TY+ +++ + ++ + +M++Q ++
Sbjct: 734 DALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLK 793
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ Y ++I L ++G V A +FE SS
Sbjct: 794 PNTITYTTMISGLARVGNVLEAKDLFERFKSS 825
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 58/133 (43%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
YN +L ++ R + + M AG P + ++ + K R+L M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ +P YT LI + + L L M++ +++++ +LI + G+V
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253
Query: 260 DLAMTIFEEMNSS 272
D A+++ +EM S+
Sbjct: 254 DAALSLLDEMKSN 266
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 99/166 (59%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I+ N + A + +QI +++ +K PD+ TYNI++ GR GRV+ + F
Sbjct: 439 IMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEE 498
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ + PD ISYN+L+N L K +D + F+EM E G+ PD++TY+ LI+ FG+T
Sbjct: 499 LENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDK 558
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E + RLF++M ++ P++ Y L+D L++ G+ A+ ++ ++
Sbjct: 559 VEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAVDLYAKL 604
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLL 60
C +E LC AG ++ A+ LL + +K I YN V A I
Sbjct: 406 CMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQI----------- 454
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + E++ Q P I N +I +F ++ +++
Sbjct: 455 ------------------------SHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVD 490
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ F+ ++ CKPD+I+YN +++ LG+ G V++ F M+E G+ PD ++Y+TL+
Sbjct: 491 IAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLI 550
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K ++++ F EM P+L+TY L+D R+G E++ L+ +KQQ +
Sbjct: 551 ECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAVDLYAKLKQQGLT 610
Query: 241 PSIYVYRSLIDNLKKMGKVDL 261
P Y ++++ L+ G L
Sbjct: 611 PDSITY-AVLERLQSGGHGKL 630
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 4/167 (2%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N ++ A AK ++ + +F+ +K C+PD+ TY I++ + G+ + ++ L F
Sbjct: 232 IFGYNMLLDALAKDEKV-CSYKVFEDMKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQ 290
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+M G P+ I YNT++ L K R +D ++ F +M E+ I+P+ TY+ +++ G
Sbjct: 291 AMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEG 350
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + L D+ ++ I IY Y + L K+G A +F M
Sbjct: 351 KLNK-LDNIVDISKKYINKQIYAY--FVRTLSKVGHASEAHRLFCNM 394
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 37/272 (13%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIE 92
YN +L A A+ + S+++ +D+ R D YT R + + L +
Sbjct: 234 GYNMLLDALAKDEKV-CSYKVFEDM--KRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQ 290
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++I N +I A AK R ++KA+L+F + +P+ TY+++L++L G
Sbjct: 291 AMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEG 350
Query: 153 RVNDMLNEFASMKE---AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG--------- 200
++N + N K+ + F+ + + + + RL + F + G
Sbjct: 351 KLNKLDNIVDISKKYINKQIYAYFVRTLSKVGHASEAHRLFCNMWNFHDKGDKDACMSML 410
Query: 201 --------------------ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
E GI D + Y + + GR I L+ MKQ
Sbjct: 411 ESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPP 470
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I+ Y LI + + G+VD+A+ FEE+ +S
Sbjct: 471 PDIFTYNILISSFGRAGRVDIAVKFFEELENS 502
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 94/156 (60%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ ++E AL ++ + C P+L+TYNI++DI G++G + + ++++ G P+
Sbjct: 120 KANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVR 179
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YNT+L+ + + + L + M G +P TYTALI ++G+TG IEE+LR+F DM
Sbjct: 180 TYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDM 239
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ ++ Y SLI +K G+ LA+ + +EM+
Sbjct: 240 VRRGCERNVITYSSLISACEKAGRWQLALELLDEMH 275
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
K GN AV++L +L D+ YN +L A + + + ++ + +L ++
Sbjct: 155 KMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTAT 214
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
YT A+ T + L +++V+ ++I + +I A K+ + + AL + D +
Sbjct: 215 TYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEM 274
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
CKP+ +T+N +L + G+ + F M G PD +SY L++ + +
Sbjct: 275 HRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQW 334
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
L EM G +PD+ Y +I++ R+G + L+
Sbjct: 335 CRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLSAQLK 374
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D+ TY ++ G ++ L A M+ GVV + +Y+ L+N K L+L L +
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
++ G P+L+TY LID G+ GN +E++++ + ++ Q +P + Y +++ +
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRS 191
Query: 257 GKVDLAMTIFEEMNSSLSDLAGP 279
G+ + A+ ++E M L+D A P
Sbjct: 192 GQPEHALRVYERM---LADGAQP 211
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 85/170 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N +I K ++A+ + D ++ KP++ TYN +L R G+ L +
Sbjct: 142 NLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVY 201
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M G P +Y L++ K +++ L F++M G + +++TY++LI + +
Sbjct: 202 ERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKA 261
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G + +L L ++M + +P+ + +L+ + G+ A +FE+M S
Sbjct: 262 GRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPS 311
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 19/264 (7%)
Query: 18 AVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFAR 76
A+ L+ +R + + Y+ ++ + N+++L+ + LL C N
Sbjct: 92 ALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLL------REGCTPNLVT 145
Query: 77 AFIMTD---------DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
I+ D + Q+L +E+ Q PE + N I+ A +S Q E AL +++
Sbjct: 146 YNILIDIHGKMGNWQEAVQVLDALED--QGTKPE-VRTYNTILSACNRSGQPEHALRVYE 202
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ +P TY ++ G+ G++ + L F M G + I+Y++L++ K
Sbjct: 203 RMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAG 262
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R L L EM KP+ +T+ AL+ + + G + + +F M +P Y
Sbjct: 263 RWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYA 322
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
LI + + A+ +EM
Sbjct: 323 ILISAFDRGNQWCRALQALDEMQG 346
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 55/120 (45%)
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R + D L E + D +Y T+++ ++L L EM G+ ++
Sbjct: 50 RASELFDWLRSLPDNHELAHLCDVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVH 109
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+AL++ + +E +L ++ + ++ P++ Y LID KMG A+ + + +
Sbjct: 110 TYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDAL 169
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 91/155 (58%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K IE A +FD + C+P+ YNI+L+ G + F SM E G+ PD
Sbjct: 883 KDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIK 942
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SY +++ L RL+ L YF+++ + G++PDL+TY LI G++G +EE+L L+NDM
Sbjct: 943 SYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDM 1002
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ I P++Y Y SLI L K GK A ++EE+
Sbjct: 1003 EKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEEL 1037
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 129/276 (46%), Gaps = 5/276 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ G V A+ + ++ K I +P +YN ++ + + + + ++ + +
Sbjct: 353 VDALCQVGRVDEALDVFDEMKQKGI-IPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + + F + + + L E + ++ N +++ AK+ ++ A
Sbjct: 412 PTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAK 471
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K + PD ITY +++ + ++ + FA M E PD ++ N+L++ L
Sbjct: 472 RVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDML 531
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R + F E+ E ++P TY L+ GR G ++E ++L M P+I
Sbjct: 532 YKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNI 591
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEE--MNSSLSDLA 277
Y +++D L K G+V+ A+ + MN + DL+
Sbjct: 592 ITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLS 627
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 111/234 (47%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ ++ +D + + L+ + + Y + + +E++
Sbjct: 839 YNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML 898
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + + N ++ + + EK +F+ + PD+ +Y +V+D L GR+N
Sbjct: 899 ECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN 958
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D L+ F + + G+ PD I+YN L++ L K RL+ L + +M + GI P+L TY +LI
Sbjct: 959 DGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 1018
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ G E+ +++ ++ + +P+++ Y +LI G + A + M
Sbjct: 1019 LYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRM 1072
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I I+ A +F +K L C PD TY+++LD +G+ R+ DML M
Sbjct: 770 NALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHN 829
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +++YNT+++ L K + LD + + ++ G P TY L+D + GNIE+
Sbjct: 830 KGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIED 889
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LF++M + P+ +Y L++ + G + +FE M
Sbjct: 890 AEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESM 932
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ AF K R E + + ++ +P++ +Y I + +LG+ GR+ + M+E G
Sbjct: 212 LMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEG 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++ L+ L RL F +M S KPD +TY L+D G +G+
Sbjct: 272 CKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVS 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++N +K ++ Y + +D L ++G+VD A+ +F+EM
Sbjct: 332 EIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEM 372
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I++ +K ++++Y +D L +VGRV++ L+ F MK+ G++P SYN+L++
Sbjct: 333 IWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFL 392
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K R + L F M G P+ T+ I+ G++G ++L+ + MK + I P +
Sbjct: 393 KADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVV 452
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ L K G++ +A +F E+ +
Sbjct: 453 AGNAVLYGLAKTGRLGMAKRVFHELKA 479
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 8/241 (3%)
Query: 3 NGYIEKL-----CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQI 55
NGY L K+G A++ + ++ K I +P+ A N VL A+T + ++ ++
Sbjct: 415 NGYTHVLFINYHGKSGESLKALKRYELMKSKGI-VPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+L + + YT + + + + E+++ ++ +N +I K
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ + +A IF +K + +P TYN +L LGR G+V +++ M P+ I+
Sbjct: 534 AGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIIT 593
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNT+L+ L K ++ L M +G PDL +Y ++ + G ++E+ +F MK
Sbjct: 594 YNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK 653
Query: 236 Q 236
+
Sbjct: 654 K 654
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I L K+ + A+ L L + P Y +L + +I+ + + ++L
Sbjct: 840 NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + + D ++ E +V+ I +I ++
Sbjct: 900 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L F + + +PDLITYN+++ LG+ GR+ + L+ + M++ G+ P+ +YN+L+
Sbjct: 960 GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K + + E+ G KP++ TY ALI + +G+ E + + M RP
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079
Query: 242 SIYVYRSLIDNL 253
+ Y L + +
Sbjct: 1080 NSSTYMQLPNQM 1091
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN ++ L + G + ++ + +M GVVP +Y+ L+ K R + + EM
Sbjct: 173 TYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEM 232
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G++P++ +YT I G+ G +EE+ R+ M+++ +P + LI L G++
Sbjct: 233 EARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRL 292
Query: 260 DLAMTIFEEMNSS 272
A +F +M +S
Sbjct: 293 ADAKDVFWKMKAS 305
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD ++ K ++ T+ V +G G + MKEAG+V + +YN L+ L
Sbjct: 123 VFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLV 182
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + ++ M G+ P + TY+ L+ +FG+ + E + L +M+ + +RP++Y
Sbjct: 183 KSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVY 242
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y I L + G+++ A I +M
Sbjct: 243 SYTICIRVLGQAGRLEEAYRILRKM 267
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 125/287 (43%), Gaps = 35/287 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQI---LK 57
N ++ LCK G V+ A+ +L S+ N +P+ +YN V+ + +D +F + +K
Sbjct: 595 NTVLDCLCKNGEVNYALDMLYSMT-MNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK 653
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+L +F R+ +M + L E ++Q S V+ ++ K
Sbjct: 654 KVLAPDYATVCTILPSFVRSGLMKE---ALHTVREYILQPDSKVDRSSVHSLMEGILKRD 710
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA---------- 167
EK++ ++I + ++LD L ++ ++ F KEA
Sbjct: 711 GTEKSIEFAENIA---------SSGLLLDDL----FLSPIIRHFCKHKEALAAHELVKKF 757
Query: 168 ---GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
GV SYN L+ L +D+ F EM G PD TY ++D+ G++ I
Sbjct: 758 ENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRI 817
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
E+ L++ +M + + + Y ++I L K +D A+ ++ ++ S
Sbjct: 818 EDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS 864
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 91/155 (58%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K IE A +FD + C+P+ YNI+L+ G + F SM E G+ PD
Sbjct: 883 KDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIK 942
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SY +++ L RL+ L YF+++ + G++PDL+TY LI G++G +EE+L L+NDM
Sbjct: 943 SYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDM 1002
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ I P++Y Y SLI L K GK A ++EE+
Sbjct: 1003 EKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEEL 1037
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 129/276 (46%), Gaps = 5/276 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ G V A+ + ++ K I +P +YN ++ + + + + ++ + +
Sbjct: 353 VDALCQVGRVDEALDVFDEMKQKGI-IPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + + F + + + L E + ++ N +++ AK+ ++ A
Sbjct: 412 PTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAK 471
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K + PD ITY +++ + ++ + FA M E PD ++ N+L++ L
Sbjct: 472 RVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDML 531
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R + F E+ E ++P TY L+ GR G ++E ++L M P+I
Sbjct: 532 YKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNI 591
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEE--MNSSLSDLA 277
Y +++D L K G+V+ A+ + MN + DL+
Sbjct: 592 ITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLS 627
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 111/234 (47%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ ++ +D + + L+ + + Y + + +E++
Sbjct: 839 YNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML 898
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + + N ++ + + EK +F+ + PD+ +Y +V+D L GR+N
Sbjct: 899 ECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN 958
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D L+ F + + G+ PD I+YN L++ L K RL+ L + +M + GI P+L TY +LI
Sbjct: 959 DGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 1018
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ G E+ +++ ++ + +P+++ Y +LI G + A + M
Sbjct: 1019 LYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRM 1072
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I I+ A +F +K L C PD TY+++LD +G+ R+ DML M
Sbjct: 770 NALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHN 829
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +++YNT+++ L K + LD + + ++ G P TY L+D + GNIE+
Sbjct: 830 KGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIED 889
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LF++M + P+ +Y L++ + G + +FE M
Sbjct: 890 AEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESM 932
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ AF K R E + + ++ +P++ +Y I + +LG+ GR+ + M+E G
Sbjct: 212 LMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEG 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++ L+ L RL F +M S KPD +TY L+D G +G+
Sbjct: 272 CKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVS 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++N +K ++ Y + +D L ++G+VD A+ +F+EM
Sbjct: 332 EIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEM 372
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I++ +K ++++Y +D L +VGRV++ L+ F MK+ G++P SYN+L++
Sbjct: 333 IWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFL 392
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K R + L F M G P+ T+ I+ G++G ++L+ + MK + I P +
Sbjct: 393 KADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVV 452
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ L K G++ +A +F E+ +
Sbjct: 453 AGNAVLYGLAKTGRLGMAKRVFHELKA 479
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I L K+ + A+ L L + P Y +L + +I+ + + ++L
Sbjct: 840 NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + + D ++ E +V+ I +I ++
Sbjct: 900 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L F + + +PDLITYN+++ LG+ GR+ + L+ + M++ G+ P+ +YN+L+
Sbjct: 960 GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K + + E+ G KP++ TY ALI + +G+ E + + M RP
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079
Query: 242 SIYVYRSLIDNL 253
+ Y L + +
Sbjct: 1080 NSSTYMQLPNQM 1091
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 8/241 (3%)
Query: 3 NGYIEKL-----CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQI 55
NGY L K+G A++ + ++ K I +P+ A N VL A+T + ++ ++
Sbjct: 415 NGYTHVLFINYHGKSGESLKALKRYELMKSKGI-VPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+L + + YT + + + + E+++ ++ +N +I K
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ + +A IF +K + +P TYN +L LGR G+V +++ M P+ I+
Sbjct: 534 AGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIIT 593
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNT+L+ L K ++ L M +G PDL +Y ++ + ++E+ +F MK
Sbjct: 594 YNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK 653
Query: 236 Q 236
+
Sbjct: 654 K 654
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN ++ L + G + ++ + +M GVVP +Y+ L+ K R + + EM
Sbjct: 173 TYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEM 232
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G++P++ +YT I G+ G +EE+ R+ M+++ +P + LI L G++
Sbjct: 233 EARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRL 292
Query: 260 DLAMTIFEEMNSS 272
A +F +M +S
Sbjct: 293 ADAKDVFWKMKAS 305
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD ++ K ++ T+ V +G G + MKEAG+V + +YN L+ L
Sbjct: 123 VFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLV 182
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + ++ M G+ P + TY+ L+ +FG+ + E + L +M+ + +RP++Y
Sbjct: 183 KSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVY 242
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y I L + G+++ A I +M
Sbjct: 243 SYTICIRVLGQAGRLEEAYRILRKM 267
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 127/277 (45%), Gaps = 15/277 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQI---LK 57
N ++ LCK G V+ A+ +L S+ N +P+ +YN V+ + + +D +F + +K
Sbjct: 595 NTVLDCLCKNGEVNYALDMLYSMT-MNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK 653
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+L +F R+ +M + L E ++Q S V+ ++ K
Sbjct: 654 KVLAPDYATVCTILPSFVRSGLMKE---ALHTVREYILQPDSKVDRSSVHSLMEGILKRD 710
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV---NDMLNEFASMKEAGVVPDFI 174
EK++ ++I D + + ++ L + ++++ +F ++ GV
Sbjct: 711 GTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENL---GVSLKTG 767
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYN L+ L +D+ F EM G PD TY ++D+ G++ IE+ L++ +M
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM 827
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + + Y ++I L K +D A+ ++ ++ S
Sbjct: 828 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS 864
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 138/272 (50%), Gaps = 8/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+ A+R+ + + ++ + P+ +N ++ A+ N + +I ++
Sbjct: 193 NAVIDACSKGGDYPTALRIFREMLEQGMS-PDRITFNTLISAAGRANRWEECDRIFAEM- 250
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPE-SIIVVNRIIFAFAKSR 117
R ++ D Y + +E + + + E S+I + +I +AK
Sbjct: 251 -EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLG 309
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+A+ +F ++ +PD I YN ++DI R+G ++ + +M+EAG D ++YN
Sbjct: 310 LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYN 369
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL++ K + + EM + G P++LTY+ALID++ + G +++ LF D+K+
Sbjct: 370 ALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA 429
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P + +Y +L+D K G D A+ + EEM
Sbjct: 430 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 461
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL---VSSRT 65
++G ++ AV + +++ K + PN YN V+ A ++ D + +I +++L +S
Sbjct: 167 RSGKLAKAVEIFEAM--KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDR 224
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE-KALL 124
++ + + A ++C ++ +EE IA + + N +I + + Q+ A L
Sbjct: 225 ITFNTLISAAGRANRWEECDRIFAEMEER-GIARDD--VTYNTLIATYCRGGQMHLGAAL 281
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ K +P +ITY+ ++D ++G ++ + F M+ V PD I YNT+++
Sbjct: 282 METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHA 341
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++ D R M E+G D++TY AL+DS+G+ G E++ L +MKQ+ P+I
Sbjct: 342 RLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 401
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LID K G AM +F+++ +
Sbjct: 402 TYSALIDAYCKHGFHRDAMALFQDVKKA 429
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKG--------------------------------- 131
V + II + + + + A LIFD G
Sbjct: 122 VTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM 181
Query: 132 -LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ CKP+L+ YN V+D + G L F M E G+ PD I++NTL++ + R +
Sbjct: 182 KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWE 241
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSL 249
C F EM E GI D +TY LI ++ R G + L M K I PS+ Y ++
Sbjct: 242 ECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTM 301
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
ID K+G A+ +F+EM
Sbjct: 302 IDGYAKLGLAHEAIALFQEM 321
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 125/275 (45%), Gaps = 8/275 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G + L++++ + P+ Y+ ++ A+ + + +++
Sbjct: 263 NTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMR 322
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ CY + + + + + I+ N ++ ++ K +
Sbjct: 323 NQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFR 382
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + +K P+++TY+ ++D + G D + F +K+AG+ PD + Y+TL+
Sbjct: 383 EAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLV 442
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR----TGNIEESLRLFNDMKQ 236
+ K D L EM ++GI+P+++TY +L+D++GR LR F +
Sbjct: 443 DGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRV 502
Query: 237 QQ-IRPSIY-VYRSLIDNLKKMGKVDLAMTIFEEM 269
++PS+ +SL+D +K V A +F EM
Sbjct: 503 TMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREM 537
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 119/273 (43%), Gaps = 44/273 (16%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K G A+ L Q +R++N+ P+ YN ++ A + D + I + + +
Sbjct: 302 IDGYAKLGLAHEAIALFQEMRNQNV-EPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG 360
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y ++ + + +EE+ Q + +I+ + +I A+ K A+
Sbjct: 361 FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAM 420
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN-- 181
+F +K +PD++ Y+ ++D + G ++ L M + G+ P+ I+YN+LL+
Sbjct: 421 ALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 480
Query: 182 ---------NLRKIR-----RLDLCLI-------------------------YFREMGES 202
K+R R+ + L FREM ++
Sbjct: 481 GRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKN 540
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
G+KP+++T+++++++ ++E++ L M+
Sbjct: 541 GVKPNVVTFSSILNACSHCASVEDASNLLEAMR 573
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 128/264 (48%), Gaps = 32/264 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ LCK G + AA R++ + ++ S + D+ +L L R
Sbjct: 178 IKGLCKEGEIEAAFRVVDEM-------------FMIESGLSPDVITFNSVLDGLCKEQRI 224
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
L D + F RA + +++ + +I +K ++++AL +
Sbjct: 225 L--DAHNVFKRAL-----------------ERGCRPNVVTYSTLIDGLSKMAKMDEALQL 265
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ L C+ + +TY+ V+D L +VGR+ D + M++AG +PD ++YNTL++ K
Sbjct: 266 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 325
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+RL + REM E+G P ++TYT L R+G +E++ + + M + P+
Sbjct: 326 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 385
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y S++D L K G+V A+ FE+M
Sbjct: 386 YSSIVDGLCKAGRVTEALGYFEKM 409
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G + A+ L + F P Y+ ++ +++D ++L+++
Sbjct: 69 NTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMA 128
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y A + + +E++ P +I II K +IE
Sbjct: 129 GRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIE 188
Query: 121 KALLIFDHI----KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
A + D + GL PD+IT+N VLD L + R+ D N F E G P+ ++Y
Sbjct: 189 AAFRVVDEMFMIESGL--SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 246
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+TL++ L K+ ++D L +M E G + + +TY+ ++D + G +E+++ + M+
Sbjct: 247 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 306
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +LID K ++ A+ + EM
Sbjct: 307 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 339
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 130/269 (48%), Gaps = 4/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L K G + AV +L+ +RD LP+A YN ++ + + + +L+++L +
Sbjct: 285 VDGLLKVGRMEDAVVVLRQMRDAGC-LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S YT + + + ++ + + I + I+ K+ ++ +AL
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403
Query: 124 LIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
F+ + + P +I Y+ ++D L + G++++ M AG +PD ++++ L+N
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILING 463
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L R+D L FR M E G PD++TY L+D R ++E+ LF M+ + P
Sbjct: 464 LCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPD 523
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
R++I L ++ + + A I +E NS
Sbjct: 524 RSTRRTMIHGLLEVNRDEDAKRIQDEENS 552
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 89/165 (53%), Gaps = 1/165 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I KSR+++KA+ +F + PD++TY ++D LG+ RV + + F + G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMG-ESGIKPDLLTYTALIDSFGRTGNIEES 227
P ++YNT+++ L K R++ L + +M G +P ++TY+ LID R +++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+L +M + P+ Y +L++ L G+ A ++ E+M ++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAAN 165
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 127/275 (46%), Gaps = 18/275 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK+ V A+ L + + DK I+ P+ Y ++ + + ++ DL +
Sbjct: 2 IDGLCKSRKVDKAITLFKQMVDKAIY-PDVVTYGALIDGLGKQRRVKEAY----DLFEEA 56
Query: 64 RTLSSDCYTNFARAFIMTDDCTQ-------LLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
R + C+ M D + L ++ + + +++ + +I +
Sbjct: 57 R--AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRD 114
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++K + + + G C P+ +TYN +++ L GR + + M G P+ I++
Sbjct: 115 HEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITF 174
Query: 177 NTLLNNLRKIRRLDLCLIYFREMG--ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++ L K ++ EM ESG+ PD++T+ +++D + I ++ +F
Sbjct: 175 GLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 234
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ RP++ Y +LID L KM K+D A+ + +M
Sbjct: 235 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 269
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 138/272 (50%), Gaps = 8/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+ A+R+ + + ++ + P+ +N ++ A+ N + +I ++
Sbjct: 194 NAVIDACSKGGDYPTALRIFREMLEQGMS-PDRITFNTLISAAGRANRWEECDRIFAEM- 251
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPE-SIIVVNRIIFAFAKSR 117
R ++ D Y + +E + + + E S+I + +I +AK
Sbjct: 252 -EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLG 310
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+A+ +F ++ +PD I YN ++DI R+G ++ + +M+EAG D ++YN
Sbjct: 311 LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYN 370
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL++ K + + EM + G P++LTY+ALID++ + G +++ LF D+K+
Sbjct: 371 ALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA 430
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P + +Y +L+D K G D A+ + EEM
Sbjct: 431 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 462
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL---VSSRT 65
++G ++ AV + +++ K + PN YN V+ A ++ D + +I +++L +S
Sbjct: 168 RSGKLAKAVEIFEAM--KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDR 225
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE-KALL 124
++ + + A ++C ++ +EE IA + + N +I + + Q+ A L
Sbjct: 226 ITFNTLISAAGRANRWEECDRIFAEMEER-GIARDD--VTYNTLIATYCRGGQMHLGAAL 282
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ K +P +ITY+ ++D ++G ++ + F M+ V PD I YNT+++
Sbjct: 283 METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHA 342
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++ D R M E+G D++TY AL+DS+G+ G E++ L +MKQ+ P+I
Sbjct: 343 RLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 402
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LID K G AM +F+++ +
Sbjct: 403 TYSALIDAYCKHGFHRDAMALFQDVKKA 430
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKG--------------------------------- 131
V + II + + + + A LIFD G
Sbjct: 123 VTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM 182
Query: 132 -LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ CKP+L+ YN V+D + G L F M E G+ PD I++NTL++ + R +
Sbjct: 183 KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWE 242
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSL 249
C F EM E GI D +TY LI ++ R G + L M K I PS+ Y ++
Sbjct: 243 ECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTM 302
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
ID K+G A+ +F+EM
Sbjct: 303 IDGYAKLGLAHEAIALFQEM 322
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 128/276 (46%), Gaps = 10/276 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G + L++++ + P+ Y+ ++ A+ + + +++
Sbjct: 264 NTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMR 323
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ CY + + + + + I+ N ++ ++ K +
Sbjct: 324 NQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFR 383
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + +K P+++TY+ ++D + G D + F +K+AG+ PD + Y+TL+
Sbjct: 384 EAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLV 443
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT-----GNIEESLRLFNDMK 235
+ K D L EM ++GI+P+++TY +L+D++GR N + LR F +
Sbjct: 444 DGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPK-LRFFLLPR 502
Query: 236 QQQ-IRPSI-YVYRSLIDNLKKMGKVDLAMTIFEEM 269
++PS+ Y +SL+D +K V A +F EM
Sbjct: 503 VTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREM 538
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 120/273 (43%), Gaps = 44/273 (16%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K G A+ L Q +R++N+ P+ YN ++ A + D + I + + +
Sbjct: 303 IDGYAKLGLAHEAIALFQEMRNQNV-EPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG 361
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y ++ + + +EE+ Q + +I+ + +I A+ K A+
Sbjct: 362 FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAM 421
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN-- 181
+F +K +PD++ Y+ ++D + G ++ L M + G+ P+ I+YN+LL+
Sbjct: 422 ALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 481
Query: 182 ---------NLRKIR-----RLDLCLI-------------------------YFREMGES 202
N K+R R+ + L FREM ++
Sbjct: 482 GRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKN 541
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
G+KP+++T+++++++ ++E++ L M+
Sbjct: 542 GVKPNVVTFSSILNACSHCASVEDASSLLEAMR 574
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 91/155 (58%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K IE A +FD + C+P+ YNI+L+ G + F SM E G+ PD
Sbjct: 186 KDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIK 245
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SY +++ L RL+ L YF+++ + G++PDL+TY LI G++G +EE+L L+NDM
Sbjct: 246 SYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDM 305
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ I P++Y Y SLI L K GK A ++EE+
Sbjct: 306 EKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEEL 340
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 111/234 (47%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ ++ +D + + L+ + + Y + + +E++
Sbjct: 142 YNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML 201
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + + N ++ + + EK +F+ + PD+ +Y +V+D L GR+N
Sbjct: 202 ECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN 261
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D L+ F + + G+ PD I+YN L++ L K RL+ L + +M + GI P+L TY +LI
Sbjct: 262 DGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 321
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ G E+ +++ ++ + +P+++ Y +LI G + A + M
Sbjct: 322 LYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRM 375
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I I+ A +F +K L C PD TY+++LD +G+ R+ DML M
Sbjct: 73 NALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHN 132
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +++YNT+++ L K + LD + + ++ G P TY L+D + GNIE+
Sbjct: 133 KGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIED 192
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LF++M + P+ +Y L++ + G + +FE M
Sbjct: 193 AEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESM 235
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I L K+ + A+ L L + P Y +L + +I+ + + ++L
Sbjct: 143 NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 202
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + + D ++ E +V+ I +I ++
Sbjct: 203 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 262
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L F + + +PDLITYN+++ LG+ GR+ + L+ + M++ G+ P+ +YN+L+
Sbjct: 263 GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 322
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K + + E+ G KP++ TY ALI + +G+ E + + M RP
Sbjct: 323 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 382
Query: 242 SIYVYRSLIDNL 253
+ Y L + +
Sbjct: 383 NSSTYMQLPNQM 394
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYN L+ L +D+ F EM G PD TY ++D+ G++ IE+ L++ +M
Sbjct: 71 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM 130
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + + Y ++I L K +D A+ ++ ++ S
Sbjct: 131 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS 167
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L G L + + P+ Y+ ++ A + D + Q+L ++
Sbjct: 198 NSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMK 257
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT F +D L EE+ + +I K+ +I+
Sbjct: 258 DNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRID 317
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A F ++ C+PD I N +++ LG+ GR++D + F M +P ++YNT++
Sbjct: 318 EAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTII 377
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R +F M ESGI P TY+ LID F +T +E+++ L +M ++
Sbjct: 378 KALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF 437
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y SLID L K + DLA +F+E+ +
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVA-SAETNDIDLSFQILKDLLVSSR 64
I CK G +A++LL ++D + +LVA + ND+ + + +++
Sbjct: 237 ISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYC 296
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
YT R + F E+ + IV+N +I K+ +++ A+
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMK 356
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRV-GRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + L+C P ++TYN ++ L R +++ + F MKE+G+ P +Y+ L++
Sbjct: 357 LFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGF 416
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R++ ++ EM E G P Y +LID+ G+ + + LF ++K+ S
Sbjct: 417 CKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSS 476
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
VY +I +L K G++D A+ +F+EMN
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINMFDEMN 503
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 86 QLLIFIEEVVQ----IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
++ I+E+V+ + +P + V R++ ++ + KA+ IF IK KC+P Y
Sbjct: 141 EMWKMIQEMVRNPICVVTPTELSEVVRML---GNAKMVSKAIAIFYQIKTRKCQPTAQAY 197
Query: 142 NIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
N ++ +L G+ +V+++ NE ++ E PD ++Y+ L++ K+ R D + E
Sbjct: 198 NSMIIMLMHEGQYEKVHELYNEMST--EGHCFPDTMTYSALISAFCKLGRRDSAIQLLNE 255
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M ++G++P YT L+ F + ++ +L LF +M+ Q RP ++ Y LI L K G+
Sbjct: 256 MKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGR 315
Query: 259 VDLAMTIFEEMN 270
+D A F EM
Sbjct: 316 IDEAYHFFYEMQ 327
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 10/235 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAET----NDIDLSFQIL 56
N I L KAG + A++L Q + +P+ YN ++ A E+ +++ F+ +
Sbjct: 339 NNMINFLGKAGRLDDAMKLFQEMGTLRC-IPSVVTYNTIIKALFESKSRASEVPSWFERM 397
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K+ +S SS Y+ F T+ + ++ +EE+ + P +I A K+
Sbjct: 398 KESGISP---SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ + A +F +K Y +++ LG+ GR++D +N F M + G PD +Y
Sbjct: 455 KRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 514
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
N L++ L + LD L R M E G PD+ +Y +++ + ++ R F
Sbjct: 515 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDLIVQWRCF 569
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 6 IEKLCKAGNVSAAVRLL-----QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL- 59
I L KAG + A + R I + N N L + +D FQ + L
Sbjct: 307 IRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMIN-FLGKAGRLDDAMKLFQEMGTLR 365
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+V+ T+ + + +RA +++ + E + + S + +I F K
Sbjct: 366 CIPSVVTYNTIIKALFESKSRA-------SEVPSWFERMKESGISPSSFTYSILIDGFCK 418
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ ++EKA+++ + + P Y ++D LG+ R + F +KE
Sbjct: 419 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRV 478
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y ++ +L K RLD + F EM + G PD+ Y AL+ RTG ++E+L M+
Sbjct: 479 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 538
Query: 236 QQQIRPSIYVYRSLIDNLKK 255
+ P I Y +++ L+K
Sbjct: 539 EHGCIPDINSYNIILNGLQK 558
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 105/183 (57%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+ +++++ ++ ++ F +IE AL +FD I G+ +P+++TY ++ L
Sbjct: 139 FLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLC 198
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ +N + F M + G+ P+ ++YN+L++ L +I R R+M + GI+P+++
Sbjct: 199 KNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVI 258
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+TALID+F + G I E+ L+ M Q + P ++ Y +LI+ L G++D A +F M
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM 318
Query: 270 NSS 272
S+
Sbjct: 319 ESN 321
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIF-AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
++I + E +QI ++ I+ +S Q +A + L +PDL+T+ +L
Sbjct: 100 VVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLL 159
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
R+ D L F + G P+ ++Y TL++ L K R L+ + F +MG++GI+
Sbjct: 160 HGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIR 219
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+++TY +L+ G ++ L DM ++ I+P++ + +LID K+GK+ A +
Sbjct: 220 PNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKEL 279
Query: 266 FEEM 269
++ M
Sbjct: 280 YKVM 283
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 98/200 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T+ F + L +++V + +++ +I K+R + A+ IF+ +
Sbjct: 155 FTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMG 214
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+P+++TYN ++ L +GR +D M + G+ P+ I++ L++ K+ ++
Sbjct: 215 DNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIM 274
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++ M + + PD+ TYTALI+ G ++E+ ++F M+ P+ Y +LI
Sbjct: 275 EAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLI 334
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
K +V+ IF EM+
Sbjct: 335 HGFCKSKRVEDGTKIFYEMS 354
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 120/263 (45%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK +++ AV + + D I PN YN ++ E + +L+D++
Sbjct: 194 IHCLCKNRHLNHAVEIFNQMGDNGI-RPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRG 252
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ +T AF+ + + ++Q++ + +I ++++A
Sbjct: 253 IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEAR 312
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ P+ +TY ++ + RV D F M + G+V + I+Y L+
Sbjct: 313 QMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGY 372
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R D+ F +MG PD+ TY L+D G +E++L +F M+++++ +I
Sbjct: 373 CLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINI 432
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
Y +I + K+GKV+ A +F
Sbjct: 433 VTYTIIIQGMCKVGKVEDAFDLF 455
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++I +I AF K +I +A ++ + + PD+ TY +++ L GR+++ F
Sbjct: 256 NVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMF 315
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+ G P+ ++Y TL++ K +R++ F EM + G+ + +TYT LI +
Sbjct: 316 YLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLV 375
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
G + + +FN M ++ P I Y L+D L G V+ A+ IF+ M D+
Sbjct: 376 GRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDI 430
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+ G S A LL+ + + I PN + ++ A + I + ++ K ++
Sbjct: 226 NSLVSGLCEIGRWSDAAWLLRDMMKRGI-QPNVITFTALIDAFVKVGKIMEAKELYKVMI 284
Query: 61 VSSRTLSSDCYT---NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S YT N + D+ Q+ +E P + +I F KS+
Sbjct: 285 QMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMES--NGYYPNEVTYTT-LIHGFCKSK 341
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++E IF + + ITY +++ VGR + F M PD +YN
Sbjct: 342 RVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYN 401
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL+ L ++ L+ F+ M + + +++TYT +I + G +E++ LF + +
Sbjct: 402 VLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSK 461
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P++ Y ++I + G + A +F++M
Sbjct: 462 GMKPNVITYTTMISGFCRRGFIHEADALFKKM 493
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ + + PD+ TYN++LD L G V L F M++ + + ++Y ++ +
Sbjct: 384 VFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMC 443
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K+ +++ F + G+KP+++TYT +I F R G I E+ LF MK+ P+
Sbjct: 444 KVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 35/153 (22%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI-------- 204
+ N+ L+ F M + +P + + LL+ + K++R D+ + F +M GI
Sbjct: 62 QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121
Query: 205 ---------------------------KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+PDL+T+T+L+ F IE++L LF+ +
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
RP++ Y +LI L K ++ A+ IF +M
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMG 214
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 98/172 (56%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ I N +I A K Q+E A I ++ P+++TY+ ++D G++G + +
Sbjct: 338 QDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGL 397
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ MKE+GV PD +SYNTL++ K+ R D L ++M G+K D++TY ALID++G+
Sbjct: 398 YHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGK 457
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G +++ LF+ MK + + P++ Y +LID K G A +IF E +
Sbjct: 458 QGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRA 509
Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR-QIEKALLIFDHI 129
Y+ A+ + C + L + + + ++I N II A K ++KAL IF+ +
Sbjct: 237 YSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEM 296
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
+ +PD IT+N ++ + R D FA M+ G+ D +YNTL++ + K ++
Sbjct: 297 QKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQM 356
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+L M I P+++TY+ +ID +G+ G EE++ L++DMK+ +RP Y +L
Sbjct: 357 ELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTL 416
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
ID K+G+ D A+T ++M
Sbjct: 417 IDIYAKLGRFDDALTACKDM 436
Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP +++ + +I + K E+A+ ++ +K +PD ++YN ++DI ++GR +D L
Sbjct: 372 SP-NVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 430
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M+ G+ D ++YN L++ K + F +M G+ P++LTY+ALID++
Sbjct: 431 TACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAY 490
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ G +++ +F + K+ ++P + +Y SLID+ K G V+ A+ + +EM +
Sbjct: 491 SKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQA 544
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNEFASMKEA 167
++ A+ +S + +AL +F +K CKP+LITYN ++D G+ G + L+ F M++
Sbjct: 240 MVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKE 299
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
GV PD I++N+L+ + + F EM GI+ D+ TY LID+ + G +E +
Sbjct: 300 GVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELA 359
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + M+ + I P++ Y ++ID K+G + A+ ++ +M S
Sbjct: 360 ASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKES 404
Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 38/260 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ +CK G + A ++ S+R KNI PN Y+ ++ + + + + D+
Sbjct: 344 NTLIDAVCKGGQMELAASIMSSMRLKNIS-PNVVTYSTMIDGYGKLGCFEEAIGLYHDMK 402
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S P+ + N +I +AK + +
Sbjct: 403 ESG----------------------------------VRPDRV-SYNTLIDIYAKLGRFD 427
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL ++ + K D++TYN ++D G+ G+ D F MK G+VP+ ++Y+ L+
Sbjct: 428 DALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALI 487
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K F E +G+KPD++ Y++LIDS + G +E+++ L +M Q I+
Sbjct: 488 DAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ 547
Query: 241 PSIYVYRSLIDNLKKMGKVD 260
P+I Y SLID + G+VD
Sbjct: 548 PNIVTYNSLIDAYGRNGQVD 567
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + ++E AL +F+ + ++ Y+ ++ GR GR + L F +MK+AG
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 264
Query: 169 VVPDFISYNTLLNNLRKIRRLDL--CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
P+ I+YNT+++ K +DL L F EM + G++PD +T+ +LI R E+
Sbjct: 265 CKPNLITYNTIIDACGK-GGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWED 323
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S R+F +M+++ I I+ Y +LID + K G+++LA +I M
Sbjct: 324 SQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSM 366
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 98/189 (51%)
Query: 83 DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
D + L EE+ + I N +I ++ E + +F ++ + D+ TYN
Sbjct: 285 DLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYN 344
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
++D + + G++ + +SM+ + P+ ++Y+T+++ K+ + + + +M ES
Sbjct: 345 TLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKES 404
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G++PD ++Y LID + + G +++L DM++ ++ + Y +LID K GK A
Sbjct: 405 GVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDA 464
Query: 263 MTIFEEMNS 271
+F++M +
Sbjct: 465 AGLFDKMKA 473
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+I++ LGR+G+V L+ F ++AG + +Y+ +++ + R L F+ M +
Sbjct: 203 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262
Query: 202 SGIKPDLLTYTALIDSFGRTG-NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+G KP+L+TY +ID+ G+ G +++++L +F +M+++ + P + SLI + +
Sbjct: 263 AGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322
Query: 261 LAMTIFEEM 269
+ +F EM
Sbjct: 323 DSQRVFAEM 331
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
M D T IF+E P+ +++ + +I + K +E A+++ + +P+++
Sbjct: 495 MHQDATS--IFVEFKRAGLKPD-VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIV 551
Query: 140 TYNIVLDILGRVGRVNDMLNEFASM-----KEAGVVPDFISYNTLLN--NLRKIRRLDLC 192
TYN ++D GR G+V+++ +M + G I TL + N +
Sbjct: 552 TYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAA 611
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ F EM + G+KP+++T++A++++ R +++E+ L M+
Sbjct: 612 VSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMR 654
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ I N ++ A K Q++ A I + P+++TY+ V+D + GR+++ LN
Sbjct: 324 QDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNL 383
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F MK A + D +SYNTLL+ K+ R + L +EM SGIK D +TY AL+ +G+
Sbjct: 384 FNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGK 443
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
G EE R+F +MK ++I P++ Y +LID K G AM +F E
Sbjct: 444 QGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFRE 491
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 43/266 (16%)
Query: 9 LCKAGNVSAAVR-----LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSS 63
+C G + A R +L +++IF YN +L A + +DL+FQI+ ++
Sbjct: 300 VCGRGGLWEAARNLFSEMLYRGIEQDIF---TYNTLLDAVCKGGQMDLAFQIMSEM---- 352
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R IM + ++ + +I +AK+ ++++AL
Sbjct: 353 -----------PRKHIMPN--------------------VVTYSTVIDGYAKAGRLDEAL 381
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K D ++YN +L I ++GR + LN M+ +G+ D ++YN LL
Sbjct: 382 NLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGY 441
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + F EM I P+LLTY+ LID + + G +E++ +F + K+ ++ +
Sbjct: 442 GKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADV 501
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y +LID L K G V+ A++ +EM
Sbjct: 502 VLYSALIDALCKNGLVESAVSFLDEM 527
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNE 160
++ + +I A+ +S ++A+ +F+ +K KP+L+TYN V+D G+ G N
Sbjct: 219 TVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEI 278
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M GV PD I++N+LL + + F EM GI+ D+ TY L+D+ +
Sbjct: 279 FDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCK 338
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++ + ++ ++M ++ I P++ Y ++ID K G++D A+ +F EM
Sbjct: 339 GGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEM 387
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 1/197 (0%)
Query: 77 AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR-QIEKALLIFDHIKGLKCK 135
A+ + C + + E + +++ N +I A K +A IFD + +
Sbjct: 229 AYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQ 288
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD IT+N +L + GR G N F+ M G+ D +YNTLL+ + K ++DL
Sbjct: 289 PDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQI 348
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
EM I P+++TY+ +ID + + G ++E+L LFN+MK I Y +L+ K
Sbjct: 349 MSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAK 408
Query: 256 MGKVDLAMTIFEEMNSS 272
+G+ + A+ + +EM SS
Sbjct: 409 LGRFEEALNVCKEMESS 425
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++ ILGR+G+V N F + G +++ L++ + D + F M SG
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250
Query: 204 IKPDLLTYTALIDSFGRTG-NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+KP+L+TY A+ID+ G+ G + + +F++M + ++P + SL+ + G + A
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310
Query: 263 MTIFEEM 269
+F EM
Sbjct: 311 RNLFSEM 317
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 141 YNIVLDILGRVGRVNDMLN--EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
Y +L LG G + EFA +E + +++ L ++ +++L F
Sbjct: 151 YTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFET 210
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
G + ++ALI ++GR+G +E++++F MK ++P++ Y ++ID K G
Sbjct: 211 ALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGK-GG 269
Query: 259 VDL--AMTIFEEM 269
VD A IF+EM
Sbjct: 270 VDFNRAAEIFDEM 282
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I L + VS A++L S+ + + P YN ++ + + ++ +F++ L+
Sbjct: 262 NALIHGLAREQGVSEALKLFGSVLRQG-YEPEVPTYNILIDGLLKEDRVNEAFELFSGLV 320
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT F L+ ++++ + ++ N +I K ++++
Sbjct: 321 KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVD 380
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++ ++ C P+ I++N ++ R G+ + F M + GV P ++YN L+
Sbjct: 381 EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 440
Query: 181 NNLRKIR---RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+ L K R R+ + F M E G PD++TY+ALID G+ G ++++ RL M+ +
Sbjct: 441 DGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 500
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++Y Y SLI L + KVD A+ +F M
Sbjct: 501 GCIPNVYTYNSLISGLCGLDKVDEALELFVAM 532
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 140/268 (52%), Gaps = 6/268 (2%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
+I+ LCKAG V A+ +L+ + +K +P+ ++N V+ + +D + +L +
Sbjct: 334 FIDGLCKAGRVEDALLMLKDMDEKGC-VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 392
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ---I 119
+ ++ + + + +E+++ +++ N ++ K+RQ I
Sbjct: 393 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A+ +FD + PD++TY+ ++D LG+ G+++D +M+ G +P+ +YN+L
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 512
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L + ++D L F M E G PD +TY +I + + ++++L LF+ + +
Sbjct: 513 ISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGV 572
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
P+ +Y SLID L + +VD A+ + +
Sbjct: 573 VPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 136/270 (50%), Gaps = 7/270 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CKA + A R+LQ + +++ +P+ YN ++ + +D + ++ D
Sbjct: 159 NALINGFCKADKLDEAQRILQRMVSESL-VPDVVTYNSLVNGLCKNGRVDEARMLIVDKG 217
Query: 61 VSSRTLS-SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S ++ S + R + QLL E++V I+ N +I A+ + +
Sbjct: 218 FSPNVITYSTLISGLCRELRRLESARQLL---EKMVLNGCKPDIVSYNALIHGLAREQGV 274
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+AL +F + +P++ TYNI++D L + RVN+ F+ + + G+ PD I+Y
Sbjct: 275 SEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVF 334
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K R++ L+ ++M E G PD++++ A+I+ + ++E+ L + M+ +
Sbjct: 335 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 394
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ + +LI + GK AMT F+EM
Sbjct: 395 SPNAISFNTLICGQCRAGKWKKAMTTFKEM 424
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 11/272 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N YI LC+A + A + +R K+ F PN YN +L + + + + ++
Sbjct: 54 NIYISGLCRASRIGDAQTVFDGMR-KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMI 112
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y F + L + V+ ++ N +I F K+ +++
Sbjct: 113 KAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLD 172
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND--MLNEFASMKEAGVVPDFISYNT 178
+A I + PD++TYN +++ L + GRV++ ML + + G P+ I+Y+T
Sbjct: 173 EAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML-----IVDKGFSPNVITYST 227
Query: 179 LLNNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L R++RRL+ +M +G KPD+++Y ALI R + E+L+LF + +Q
Sbjct: 228 LISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ 287
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y LID L K +V+ A +F +
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGL 319
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA---ETNDIDLSFQILKDL 59
N + LCK G V A R+L + DK F PN + S E ++ + Q+L+ +
Sbjct: 194 NSLVNGLCKNGRVDEA-RML--IVDKG-FSPNVITYSTLISGLCRELRRLESARQLLEKM 249
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+++ Y ++ L V++ + N +I K ++
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A +F + +PD ITY + +D L + GRV D L M E G VPD +S+N +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L K +R+D + M G P+ +++ LI R G ++++ F +M ++ +
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429
Query: 240 RPSIYVYRSLIDNL---KKMGKVDLAMTIFEEM 269
+P++ Y L+D L ++ G++ A+T+F+ M
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAM 462
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 64 RTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R S D YT R+ + + + F+E+++ + I N I ++ +I
Sbjct: 10 RIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLL-VKGLCDISTFNIYISGLCRASRIGD 68
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD ++ P+ ITYN +L L GR++D + M +AG PD ++YNTLL+
Sbjct: 69 AQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLH 128
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ +LD L F + G PD++TY ALI+ F + ++E+ R+ M + + P
Sbjct: 129 GFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188
Query: 242 SIYVYRSLIDNLKKMGKVDLA 262
+ Y SL++ L K G+VD A
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEA 209
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 131/272 (48%), Gaps = 7/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + CK G + A+++ + F+P+ YN ++ + + +D + +IL+ ++
Sbjct: 124 NTLLHGFCKVGKLDEALKIFDGAVKRG-FVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS-RQI 119
S Y + + + I V + SP ++I + +I + R++
Sbjct: 183 SESLVPDVVTYNSLVNGLCKNGRVDEARMLI--VDKGFSP-NVITYSTLISGLCRELRRL 239
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E A + + + CKPD+++YN ++ L R V++ L F S+ G P+ +YN L
Sbjct: 240 ESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNIL 299
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K R++ F + + G++PD +TYT ID + G +E++L + DM ++
Sbjct: 300 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 359
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + + ++I+ L K +VD A + M +
Sbjct: 360 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 391
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ I N ++ A K Q++ A I + P+++TY+ V+D + GR+++ LN
Sbjct: 210 QDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNL 269
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F MK A + D +SYNTLL+ K+ R + L +EM SGIK D +TY AL+ +G+
Sbjct: 270 FNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGK 329
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
G EE R+F +MK ++I P++ Y +LID K G AM +F E
Sbjct: 330 QGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFRE 377
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 121/243 (49%), Gaps = 38/243 (15%)
Query: 27 DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQ 86
+++IF YN +L A + +DL+FQI+ ++ R IM +
Sbjct: 209 EQDIF---TYNTLLDAVCKGGQMDLAFQIMSEM---------------PRKHIMPN---- 246
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
++ + +I +AK+ ++++AL +F+ +K D ++YN +L
Sbjct: 247 ----------------VVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLS 290
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
I ++GR + LN M+ +G+ D ++YN LL K + + F EM I P
Sbjct: 291 IYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFP 350
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+LLTY+ LID + + G +E++ +F + K+ ++ + +Y +LID L K G V+ A++
Sbjct: 351 NLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFL 410
Query: 267 EEM 269
+EM
Sbjct: 411 DEM 413
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 3/227 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G + A +++ + K+I +PN Y+ V+ A+ +D + + ++
Sbjct: 216 NTLLDAVCKGGQMDLAFQIMSEMPRKHI-MPNVVTYSTVIDGYAKAGRLDEALNLFNEMK 274
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S L Y + + L +E+ + + N ++ + K + E
Sbjct: 275 FASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYE 334
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F+ +K + P+L+TY+ ++D+ + G + + F K+AG+ D + Y+ L+
Sbjct: 335 EVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALI 394
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ L K ++ + + EM + GI+P+++TY ++ID+FGR+G +E++
Sbjct: 395 DALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDA 441
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 200 GESGIKPDLLTYTALIDSFGRTG-------NIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
G+SG+KP+L+TY A+ID+ G+ G I + + LF++M + I I+ Y +L+D
Sbjct: 162 GDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDA 221
Query: 253 LKKMGKVDLAMTIFEEM 269
+ K G++DLA I EM
Sbjct: 222 VCKGGQMDLAFQIMSEM 238
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML-NEF 161
+++ + +I A K+ +E A+ D + +P+++TYN ++D GR G V D +E
Sbjct: 387 VVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATESEV 446
Query: 162 ASMKEAGVVPDF----ISYNTLLNNLRKIRRLDLC-LIYFREMGESGIKPDLLTYTALID 216
++ ++ F + R+ LC L F +M E IKP+++T++A+++
Sbjct: 447 GDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILN 506
Query: 217 SFGRTGNIE------ESLRLFND 233
+ R + E E LRLF++
Sbjct: 507 ACSRCNSFEDASMLLEELRLFDN 529
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 137/272 (50%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ K+G ++ L + + PN YN V+ ++N +D + + +L+
Sbjct: 829 NSLIDAHGKSGKINELFDLYDEMLTRGC-KPNTITYNMVISNLVKSNRLDKAMDLYYNLV 887
Query: 61 VSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + + + + DD ++ + +V + + N ++ + K
Sbjct: 888 SGDFSPTPCTFGPLIDGLLKSGRLDDAHEMF---DGMVHYGCRPNSAIYNILVNGYGKLG 944
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ A F + +PDL +Y I++DIL GRV+D L+ F +K+AG+ PD ++YN
Sbjct: 945 HVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYN 1004
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N L + +R + L F EM GI PDL TY +LI + G G IEE+ +++ +++
Sbjct: 1005 LMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFI 1064
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P+++ Y +LI G +LA I+++M
Sbjct: 1065 GLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 133/268 (49%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCKAG ++ A LL ++R + + LPN YN ++ N +D + + ++
Sbjct: 376 VNALCKAGRINEAFDLLDTMRKQGV-LPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + + L E++ +I+ N +++ A+ ++ +A
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAK 494
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K PD +TYN+++ +VG+V++ + + M + PD I N+L++ L
Sbjct: 495 AMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL 554
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R++ F M E + P ++TY L+ G+ G I+++++LF M P+
Sbjct: 555 YKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNT 614
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +L+D L K +VDLA+ +F +M +
Sbjct: 615 ITFNTLLDCLCKNDEVDLALKMFYKMTT 642
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 4/260 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K+G+ A+ + ++ + I PN A N L + AE + + + +L S S
Sbjct: 451 KSGHPGKALETFEKMKARGI-APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + + + + + E+ ++ +IV+N +I K+ ++E+A +F
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
++ + P ++TYNI+L LG+ G++ + F SM G P+ I++NTLL+ L K
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDE 629
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+DL L F +M +PD+LT+ +I F + I+ ++ LF+ MK + +RP +
Sbjct: 630 VDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLCT 688
Query: 249 LIDNLKKMGKVDLAMTIFEE 268
L+ + K G+++ A I E+
Sbjct: 689 LLPGVIKSGQIEDAFRITED 708
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 95/181 (52%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F++ ++ ++ V N +I F + +E A +F+ +K C PD TYN ++D
Sbjct: 776 VFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAH 835
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G+ G++N++ + + M G P+ I+YN +++NL K RLD + + + P
Sbjct: 836 GKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTP 895
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
T+ LID ++G ++++ +F+ M RP+ +Y L++ K+G VD A F+
Sbjct: 896 CTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKR 955
Query: 269 M 269
M
Sbjct: 956 M 956
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 130/270 (48%), Gaps = 6/270 (2%)
Query: 6 IEKLCKAGNVSAA----VRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I+ LCK S A V+ + L K YN ++ E +++++++ + +++
Sbjct: 761 IKVLCKHKKTSVARNVFVKFTKELGVKPTL--KVYNLLIDGFLEVHNVEVAWNLFEEMKS 818
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y + A + +L +E++ + I N +I KS +++K
Sbjct: 819 AGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDK 878
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ ++ ++ P T+ ++D L + GR++D F M G P+ YN L+N
Sbjct: 879 AMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVN 938
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ +D +F+ M + GI+PDL +YT L+D G ++++L F +KQ + P
Sbjct: 939 GYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDP 998
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y +I+ L + + + A+++F EM +
Sbjct: 999 DLVAYNLMINGLGRSQRTEEALSLFHEMQN 1028
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 133/269 (49%), Gaps = 19/269 (7%)
Query: 14 NVSAAVRLLQSLRDKNIFLPNAYN---CVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
N+ + LL+ + + PN Y C+ V + ID +++I+K R C
Sbjct: 244 NIKTVMGLLEEMESMGL-RPNIYTYTICIRVLGRD-GKIDEAYRIMK------RMDDDGC 295
Query: 71 YTNFARAFIMTDD-CTQ------LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ ++ D CT + +F + P+ + V ++ F+ ++K
Sbjct: 296 GPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT-LLDKFSDCGHLDKVE 354
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I+ ++ PD++T+ I+++ L + GR+N+ + +M++ GV+P+ +YNTL++ L
Sbjct: 355 KIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGL 414
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ RLD L F M G++P TY LID G++G+ ++L F MK + I P+I
Sbjct: 415 LRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNI 474
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + +L +MG++ A +F E+ SS
Sbjct: 475 VACNASLYSLAEMGRLGEAKAMFNELKSS 503
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 102/204 (50%)
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
L++ Y + + C + L +V S+ + ++ A K R I+ + +
Sbjct: 192 LNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGL 251
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ ++ + +P++ TY I + +LGR G++++ M + G PD ++Y L++ L
Sbjct: 252 LEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCT 311
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
R+LD + F +M S KPD +TY L+D F G++++ +++ +M+ P +
Sbjct: 312 ARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVT 371
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+ L++ L K G+++ A + + M
Sbjct: 372 FTILVNALCKAGRINEAFDLLDTM 395
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 49/309 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L + G + A R+++ + D P+ Y ++ A +D + + + SS
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCG-PDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS 329
Query: 64 RTLSSDCYTNFARAFIMTDDCTQL----LIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
Y F DC L I+ E +P+ ++ ++ A K+ +I
Sbjct: 330 HKPDKVTYVTLLDKF---SDCGHLDKVEKIWTEMEADGYAPD-VVTFTILVNALCKAGRI 385
Query: 120 EKALLIFDHIKGLKCKPDLITYN-----------------------------------IV 144
+A + D ++ P+L TYN ++
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILL 445
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+D G+ G L F MK G+ P+ ++ N L +L ++ RL F E+ SG+
Sbjct: 446 IDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGL 505
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD +TY ++ + + G ++E+++L ++M + Q P + V SLID L K G+V+ A
Sbjct: 506 APDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQ 565
Query: 265 IF---EEMN 270
+F EEMN
Sbjct: 566 MFCRMEEMN 574
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
R++E +FD ++ + ++ TY I+ L G + + M+EAG V + S
Sbjct: 137 HRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYS 196
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN L++ L + L +R M G+KP L T++AL+ + G+ NI+ + L +M+
Sbjct: 197 YNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEME 256
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
+RP+IY Y I L + GK+D A I + M+ D GP
Sbjct: 257 SMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD---DDGCGP 297
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 16/172 (9%)
Query: 117 RQIEKALLIFDHI---KGLKCKPDLI-------------TYNIVLDILGRVGRVNDMLNE 160
R ++ L+IF + GL+ P + +YN ++ L + G + L
Sbjct: 157 RNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEV 216
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ M G+ P +++ L+ K R + + EM G++P++ TYT I GR
Sbjct: 217 YRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGR 276
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G I+E+ R+ M P + Y LID L K+D AM +F +M SS
Sbjct: 277 DGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSS 328
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I +S ++AL ++ + KP L T++ ++ G+ + ++ M+
Sbjct: 198 NGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMES 257
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ P+ +Y + L + ++D + M + G PD++TYT LID+ +++
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ LF MK +P Y +L+D G +D I+ EM +
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEA 362
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 3/211 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K+G + A + + PN+ YN ++ + +D + + K ++
Sbjct: 902 IDGLLKSGRLDDAHEMFDGMVHYGC-RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT + L + E++ Q ++ N +I +S++ E+AL
Sbjct: 961 IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ PDL TYN ++ LG VG + + + ++ G+ P+ +YN L+
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+L +++M G P+ T+ L
Sbjct: 1081 TLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G + AV L L ++ P+ Y+ ++ + ++ + ++ +L
Sbjct: 152 NTVINGLCKFGKIDWAVHLFTRL-PHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMML 210
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR-QI 119
++ + Y A F + L ++ ++Q S++ N II + + +I
Sbjct: 211 EANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRI 270
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A +F + G C P+ +TY ++ L ++ V L F M +AG+ PD +Y++L
Sbjct: 271 EEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSL 330
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF--GRTGNIEESLRLFNDMKQQ 237
+ K+R+LD ++ + + PD+ YT LI + R ++E+L LF +MK +
Sbjct: 331 IYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDR 390
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ P++ Y ++ L K G+ D A IF+EM
Sbjct: 391 RVWPNVITYNIVLRGLCKTGRFDEAYQIFQEM 422
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + N ++ + ++ +AL+ F + G CKP++ TYN V++ L + G+++ ++
Sbjct: 111 PPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLCKFGKIDWAVH 169
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F + V PD +Y+TL++ L + RL+ + + M E+ D Y A+ D F
Sbjct: 170 LFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFC 229
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
+ ++E+L + M Q+ +PS+ Y +I+ + + +++ A +F++M S
Sbjct: 230 KERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGS 283
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
CYT + + + F + + S+ II F R +A ++
Sbjct: 46 CYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYM 105
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
+ L PD+ YN+VL +GRV L +F M + P+ +YNT++N L K ++
Sbjct: 106 RSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTVINGLCKFGKI 164
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
D + F + + PD TY+ L+ + +E ++++++ M + Y ++
Sbjct: 165 DWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAM 224
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
D K +VD A+ + + M
Sbjct: 225 ADGFCKERRVDEALEVLKTM 244
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 104/237 (43%), Gaps = 6/237 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAE-TNDIDLSFQILKDL 59
N + CK V A+ +L+++ + P+ YNC++ + N I+ ++++ + +
Sbjct: 222 NAMADGFCKERRVDEALEVLKTMIQRGC-KPSVVTYNCIINGVCQYKNRIEEAYRLFQQM 280
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ S ++ Y + + L + + + + +I+AF K R++
Sbjct: 281 VGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKL 340
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLD--ILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++A I PD+ Y ++ R RV++ L F +MK+ V P+ I+YN
Sbjct: 341 DEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYN 400
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+L L K R D F+EM + P+ +T+ + G ++ R+F DM
Sbjct: 401 IVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDM 457
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 1/144 (0%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ Y +L L R R + + F A P S+ ++ +R
Sbjct: 41 RHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWR 100
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
Y M GI PD+ Y ++ + G + +L F M + +P++ Y ++I+ L
Sbjct: 101 YLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTVINGLC 159
Query: 255 KMGKVDLAMTIFEEMNSSLSDLAG 278
K GK+D A+ +F + L D G
Sbjct: 160 KFGKIDWAVHLFTRLPHDLVDPDG 183
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
S K+ G D Y LL++L + RR + +F+ + +P L ++T +I F
Sbjct: 34 SSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVR 93
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
N + R M+ I P + Y ++ +G+V A+ F +M +
Sbjct: 94 NPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT 143
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 128/264 (48%), Gaps = 34/264 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+ L K G+ S A RL N +NC E D D +L+ L + +T
Sbjct: 390 VRTLKKLGHASEAHRLFC----------NMWNC-----HERGDRDACVSMLECLCSAGKT 434
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
T+ + + ++ + ++ N + A K +QI +
Sbjct: 435 -------------------TEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDL 475
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ +K PD TYNI++ GR G+V++ + F ++++ PD SYN+L+N L K
Sbjct: 476 YEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGK 535
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
LD + F+EM E G+ PD++TY+ LI+ FG+T +E + RLF++M + P+I
Sbjct: 536 NGHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVT 595
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L++ G+ A+ ++ ++
Sbjct: 596 YNILLDCLERSGRTAEAVDLYAKL 619
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 36/249 (14%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
C +E LC AG + A+ LL + +K + + YN V A + I L DL
Sbjct: 421 CVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQIS----PLHDLY 476
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
E++ Q N +I +F ++ +++
Sbjct: 477 -------------------------------EKMKQDGPLPDTFTYNILISSFGRAGKVD 505
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ IF+ ++ KPD +YN +++ LG+ G +++ +F M E G+ PD ++Y+TL+
Sbjct: 506 EAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLI 565
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K ++++ F EM G P+++TY L+D R+G E++ L+ +KQQ +
Sbjct: 566 ECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLI 625
Query: 241 PSIYVYRSL 249
P Y L
Sbjct: 626 PDSITYSVL 634
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 131/268 (48%), Gaps = 20/268 (7%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G ++ L + + +K + PN AYN ++ A A +D K +L+ + +
Sbjct: 293 KIGKPDESLELFEEMLNKG-YSPNVIAYNTMIQALANARMVD------KAILLFLKMVEK 345
Query: 69 DCY-TNFARAFIMTDDCTQLLIF-IEEVVQIASPESIIVVNRIIFAF-----AKSRQIEK 121
+C + F + I+ T+ + ++EVV+++ ++R I+A+ K +
Sbjct: 346 ECRPSEFTYSVILHLLATERKLHKLDEVVEVSKK----YMSRSIYAYLVRTLKKLGHASE 401
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F ++ + D +L+ L G+ + ++ + E GV D + YNT+ +
Sbjct: 402 AHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFS 461
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K++++ + +M + G PD TY LI SFGR G ++E++++F +++ +P
Sbjct: 462 ALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKP 521
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI+ L K G +D A F+EM
Sbjct: 522 DTCSYNSLINCLGKNGHLDEAHMKFKEM 549
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N ++ A K +++ A +F+ +K C+PD TY I++ + G++G+ ++ L F
Sbjct: 246 IFAFNMLLDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFE 305
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G P+ I+YNT++ L R +D ++ F +M E +P TY+ ++
Sbjct: 306 EMLNKGYSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATER 365
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + L ++ ++ + SIY Y L+ LKK+G A +F M
Sbjct: 366 KLHK-LDEVVEVSKKYMSRSIYAY--LVRTLKKLGHASEAHRLFCNM 409
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
A+N +L A + +++D ++++ +D+ YT R + L EE+
Sbjct: 248 AFNMLLDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEM 307
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ ++I N +I A A +R ++KA+L+F + +C+P TY+++L +L ++
Sbjct: 308 LNKGYSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERKL 367
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKI------RRL-------------DLCLIY 195
+ L+E + + + +Y L+ L+K+ RL D C+
Sbjct: 368 HK-LDEVVEVSKKYMSRSIYAY--LVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSM 424
Query: 196 FR----------------EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ E G+ D + Y + + G+ I L+ MKQ
Sbjct: 425 LECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGP 484
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y LI + + GKVD A+ IFEE+ S
Sbjct: 485 LPDTFTYNILISSFGRAGKVDEAIKIFEELEDS 517
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A+ +SR EK ++ +K D+ +N++LD L + V+ F MK
Sbjct: 217 LVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKH 276
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD +Y ++ KI + D L F EM G P+++ Y +I + +++++
Sbjct: 277 CEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDKAI 336
Query: 229 RLFNDMKQQQIRPSIYVYR---SLIDNLKKMGKVD 260
LF M +++ RPS + Y L+ +K+ K+D
Sbjct: 337 LLFLKMVEKECRPSEFTYSVILHLLATERKLHKLD 371
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+K+ G+ +Y L+ + R + + EM + G D+ + L+D+ +
Sbjct: 202 IKKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSE 261
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + ++F DMK++ P Y Y +I K+GK D ++ +FEEM
Sbjct: 262 VDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEM 307
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
IE CK V A++LL +RDK P+ YN ++ + +D + + L +
Sbjct: 254 IEATCKESGVGQAMKLLDEMRDKGC-KPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + R+ T F+ E+++ S++ N +I + I +A+
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + C P+ ++YN +L L + ++ + M G PD ++YNTLL L
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D+ + ++G G P L+TY +ID + G +++++L ++MK + ++P I
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDI 492
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +L+ L + GKVD A+ F ++
Sbjct: 493 ITYSTLVGGLSREGKVDEAIAFFHDL 518
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 140/339 (41%), Gaps = 70/339 (20%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C I LCK G A R+++ L D +P+ YN ++ +T +I + Q+L +
Sbjct: 148 CTSLIRGLCKTGKTWKATRVMEILEDSGA-VPDVITYNVLISGYCKTGEIGSALQLLDRM 206
Query: 60 LVSS--------------------------RTLSSDCYTNFARAFIMTD------DCTQL 87
VS R + +CY + I+ + Q
Sbjct: 207 SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQA 266
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL-- 145
+ ++E+ ++ N +I K ++++A+ +H+ C+P++IT+NI+L
Sbjct: 267 MKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRS 326
Query: 146 ---------------------------------DILGRVGRVNDMLNEFASMKEAGVVPD 172
+ L R G + ++ M + G P+
Sbjct: 327 MCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPN 386
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+SYN LL+ L K ++++ + Y M G PD++TY L+ + + G ++ ++ + N
Sbjct: 387 SLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 446
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + P + Y ++ID L K+GK D A+ + +EM
Sbjct: 447 QLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKG 485
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 25/266 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +CK G + A+R L + PN +N +L + T + + L +++
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHMPSYGC-QPNVITHNIILRSMCSTGRWMDAEKFLAEMI 344
Query: 61 ---VSSRTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFA 112
S ++ + NF C + LI +E++ Q + + N ++ A
Sbjct: 345 RKGCSPSVVTFNILINFL--------CRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHA 396
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGV 169
K +++E+A+ D + C PD++TYN +L L + G+V+ ++LN+ S G
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGS---KGC 453
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P I+YNT+++ L K+ + D + EM G+KPD++TY+ L+ R G ++E++
Sbjct: 454 SPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIA 513
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKK 255
F+D+++ ++P+ Y S++ L K
Sbjct: 514 FFHDLEEMGVKPNAITYNSIMLGLCK 539
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 106/223 (47%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
I + +L+ + T +S Y A + + +++ +V I+ N
Sbjct: 368 IGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNT 427
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A K +++ A+ I + + C P LITYN V+D L +VG+ +D + MK G
Sbjct: 428 LLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKG 487
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+Y+TL+ L + ++D + +F ++ E G+KP+ +TY +++ + ++
Sbjct: 488 LKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAI 547
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + +P+ Y LI+ L G A+ + E+ S
Sbjct: 548 DFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCS 590
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 5/171 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G V AV +L L K + YN V+ ++ D + ++L ++
Sbjct: 426 NTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEM-- 483
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ L D Y+ + + F ++ ++ + I N I+ K+RQ
Sbjct: 484 KGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQT 543
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
+A+ ++ CKP +Y I+++ L G + L + GVV
Sbjct: 544 VRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVV 594
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 181 NNLRKIRR---LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
N+LR++ R L+ + +M G PD++ T+LI +TG ++ R+ ++
Sbjct: 115 NHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDS 174
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y LI K G++ A+ + + M+ S
Sbjct: 175 GAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVS 209
>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
Length = 796
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 123/253 (48%), Gaps = 2/253 (0%)
Query: 21 LLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAF 78
Q +R + ++P+ Y+ +L D ++L DL +++ Y + +
Sbjct: 121 FFQWIRRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLSDLKADKCPMTTVAYNTLIKVY 180
Query: 79 IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDL 138
+ + +E+ I N ++ ++ + Q EK L ++D ++ + C D
Sbjct: 181 GKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDR 240
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+ Y +V+ G+VGR++ F MK G P+ ++Y+ L+ K RL++ YF E
Sbjct: 241 VGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEE 300
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M I+P L T+ +LI+++ ++G +E L+ F DM+ +P++ +Y +L+D K G
Sbjct: 301 MRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGM 360
Query: 259 VDLAMTIFEEMNS 271
+D A+ +E M
Sbjct: 361 LDAALEFYERMRG 373
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/202 (16%), Positives = 85/202 (42%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
Y V+ + + +DL+ + + + ++ Y+ + + + EE+
Sbjct: 242 GYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEM 301
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ + +I A+ KS ++E L F ++ KP+L Y ++D + G +
Sbjct: 302 RSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGML 361
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ L + M+ G+ + + L+ + + + + +REM G++P T +
Sbjct: 362 DAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPSHFTCRIV 421
Query: 215 IDSFGRTGNIEESLRLFNDMKQ 236
+ + + G ++ R+ +M++
Sbjct: 422 VGAVAKGGKYDDVERILFEMQE 443
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 141/271 (52%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK V+ AV L + D+ I P+ YN +L ++ + ++ K+++
Sbjct: 240 NTIIDSLCKDRLVNEAVEFLSEMVDRGI-PPDVVTYNTILHGFCSLGQLNEATRLFKEMV 298
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + ++ E + + + + N ++ + Q++
Sbjct: 299 GRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMD 358
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + G C P+L +YNI+++ + R+N+ + M E + PD ++Y+TL+
Sbjct: 359 EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLM 418
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L ++ R L F+EM SG+ PDL+ Y+ L+D F + G+++E+L+L +M +++I+
Sbjct: 419 QGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 478
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+I +Y LI + GK+++A +F ++++
Sbjct: 479 PNIILYTILIRGMFIAGKLEVAKELFSKLSA 509
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 38/266 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G VS A + +++ +K PNAY N ++ N +D + ++L ++
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGA-EPNAYTYNALMDGYCLHNQMDEAIKVLGIMI--- 368
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
C N + N +I + KS+++ +A
Sbjct: 369 ---GKGCAPNLSS-----------------------------YNILINGYCKSKRMNEAK 396
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD +TY+ ++ L +VGR + LN F M +G++PD ++Y+ LL+
Sbjct: 397 RLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGF 456
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K LD L +EM E IKP+++ YT LI G +E + LF+ + IRP I
Sbjct: 457 CKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDI 516
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +I L K G D A F +M
Sbjct: 517 WTYNVMIKGLLKEGLSDEAYEFFRKM 542
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 130/280 (46%), Gaps = 9/280 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N I LC G + AV L + + N+ +YN V+ + + ++ ++ +
Sbjct: 170 NTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVI---SYNTVINGLCKNGNTIMAVRVFRK 226
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + + Y + + + F+ E+V P ++ N I+ F Q
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A +F + G PD +T+NI++D L + G V++ +M E G P+ +YN
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ ++D + M G P+L +Y LI+ + ++ + E+ RL ++M ++
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS--LSDL 276
+ P Y +L+ L ++G+ A+ +F+EM SS L DL
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 89/166 (53%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I N +I +I++A+ +F+ + +P++I+YN V++ L + G + F
Sbjct: 167 ITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRK 226
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M++ P+ ++YNT++++L K R ++ + + EM + GI PD++TY ++ F G
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E+ RLF +M + + P + L+D L K G V A + E M
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM 332
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 97/186 (52%), Gaps = 7/186 (3%)
Query: 84 CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI 143
C Q+ +F ++ +N +I + ++ A+ + + L +PD IT+N
Sbjct: 119 CNQMDLF-------GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNT 171
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+++ L G++ + + F M +G P+ ISYNT++N L K + + FR+M ++
Sbjct: 172 LINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR 231
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
KP+++TY +IDS + + E++ ++M + I P + Y +++ +G+++ A
Sbjct: 232 GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEAT 291
Query: 264 TIFEEM 269
+F+EM
Sbjct: 292 RLFKEM 297
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 97/176 (55%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+V++ S++ + + + AK +Q A+ + + + ++ + N++++ L R+
Sbjct: 87 MVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSH 146
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V+ ++ M + G+ PD I++NTL+N L ++ + F EM SG +P++++Y
Sbjct: 147 VDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNT 206
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I+ + GN ++R+F M+Q + +P++ Y ++ID+L K V+ A+ EM
Sbjct: 207 VINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEM 262
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ AL F + + +P ++ + L + + + + ++ M GV + S N
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L ++ +D + +M + GI+PD +T+ LI+ G I+E++ LFN+M
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y ++I+ L K G +A+ +F +M
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKM 227
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/251 (18%), Positives = 113/251 (45%), Gaps = 3/251 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C + A+++L + K PN +YN ++ ++ ++ + ++L ++
Sbjct: 345 NALMDGYCLHNQMDEAIKVLGIMIGKGC-APNLSSYNILINGYCKSKRMNEAKRLLSEMS 403
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T + Y+ + + L +E+ ++ + ++ F K ++
Sbjct: 404 EKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLD 463
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + + KP++I Y I++ + G++ F+ + G+ PD +YN ++
Sbjct: 464 EALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMI 523
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K D +FR+M + G PD +Y +I F + + +++L ++M ++
Sbjct: 524 KGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFS 583
Query: 241 PSIYVYRSLID 251
++ L+D
Sbjct: 584 ADSSTFQMLLD 594
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 139/298 (46%), Gaps = 40/298 (13%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS----- 63
K G ++ L Q + +K + PN AYN ++ A A +D + + ++V
Sbjct: 307 KIGKADESLTLFQEMTEKG-YTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFM 365
Query: 64 ---------RTLSS-----------------------DCYTNFARAFIMTDDCTQLLIFI 91
RTLS D Y + + T+ L +
Sbjct: 366 NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLL 425
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
++ + ++ N ++ A K ++ +++ +K PD+ +YNI++ GR
Sbjct: 426 SKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRA 485
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + + F ++ + PD IS+N+L+N L K +D + F+EM E G+ PD++TY
Sbjct: 486 GRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTY 545
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LI+ FG+T +E + RLF++M + P+I Y L+D L++ G+ A+ ++ ++
Sbjct: 546 STLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKL 603
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 123/246 (50%), Gaps = 9/246 (3%)
Query: 6 IEKLCKAGNVSAAVRL---LQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
+ L K G+ S A RL + S D+ +AY +L + + + +L +
Sbjct: 374 VRTLSKLGHASEAHRLFCNMWSFHDEGD--RDAYMSMLESLCDAGKTTEALDLLSK--IH 429
Query: 63 SRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +S+D Y A + L E++ Q I N +I +F ++ ++E
Sbjct: 430 EKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVE 489
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ IF+ ++ CKPD+I++N +++ LG+ G +++ F M+E G+ PD ++Y+TL+
Sbjct: 490 EAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLI 549
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K ++++ F EM G P+++TY L+D R+G E++ L+ +KQQ +
Sbjct: 550 ECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLT 609
Query: 241 PSIYVY 246
P Y
Sbjct: 610 PDSITY 615
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 37/272 (13%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN +L A A+ N +D + + KD+ YT R + L +E+
Sbjct: 262 AYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEM 321
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI------------------------- 129
+ ++I N +I A A +R ++K + +F +
Sbjct: 322 TEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLG 381
Query: 130 -----KGLKC-------KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
L C + D Y +L+ L G+ + L+ + + E + D + YN
Sbjct: 382 HASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYN 441
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T+L+ L K+++ + +M + G PD+ +Y LI SFGR G +EE++++F +++
Sbjct: 442 TVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENS 501
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P I + SLI+ L K G +D A F+EM
Sbjct: 502 SCKPDIISFNSLINCLGKNGDIDEAHMRFKEM 533
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI +N +I F +E+ FD +K + + TY +L R N +
Sbjct: 192 SISTINILIGIFGGGADVERC---FDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVY 248
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
++ G D +YN LL+ L K ++D + F++M +PD TYT +I G+
Sbjct: 249 VELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKI 308
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +ESL LF +M ++ P++ Y ++I L VD + +F +M
Sbjct: 309 GKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKM 356
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 37/238 (15%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
Y C+L A +N+ + +F++ Y R D
Sbjct: 227 TYKCLLQAHLRSNNSNKAFEV---------------YVELRRRGYKLD------------ 259
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
I N ++ A AK ++++ ++F +K C+PD TY I++ + G++G+
Sbjct: 260 --------IFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKA 311
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM--GESGIKPDLLTYT 212
++ L F M E G P+ I+YNT++ L R +D + F +M S + Y
Sbjct: 312 DESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYA 371
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
L+ + + G+ E+ RLF +M Y S++++L GK A+ + +++
Sbjct: 372 YLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIH 429
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 142/271 (52%), Gaps = 8/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA-----SAETNDIDLSFQILKD 58
++ L + G V A+ LL L +++ F P +YN VL A S+ D D + ++ +D
Sbjct: 139 VKSLSRLGFVPKALTLLH-LANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + + + Y R + D + L F+ ++ + +++ N +I A K ++
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A+ + + +LI+YN V++ L GR++++ M+ G+VPD ++YNT
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N K L L+ EM G+ P+++TYT LI+ + GN+ ++ +F+ M+ +
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+RP+ Y +LID + G ++ A + EM
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEM 408
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 3/262 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + CK GN+ + LL + K + PN Y ++ + ++ + +I +
Sbjct: 316 NTLVNGFCKEGNLHQGLVLLSEMVGKGLS-PNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V + YT F + + E++ S++ N ++ + +++
Sbjct: 375 VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQ 434
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ I + PD+++Y+ V+ R + M E GV+PD ++Y++L+
Sbjct: 435 EAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI 494
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L ++L FREM G+ PD +TYT+LI+++ G + ++LRL ++M Q+
Sbjct: 495 QGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFL 554
Query: 241 PSIYVYRSLIDNLKKMGKVDLA 262
P Y LI+ L K + +A
Sbjct: 555 PDNVTYSVLINGLNKKARTKVA 576
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK V A+ LL+++ + N +YN V+ + ++++++
Sbjct: 246 NTLIDASCKKKKVKEAMALLRAMAVGGV-AANLISYNSVINGLCGKGRMSEVGELVEEMR 304
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y F + Q L+ + E+V +++ +I K+ +
Sbjct: 305 GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ IFD ++ +P+ TY ++D + G +N+ + M +G P ++YN L+
Sbjct: 365 RAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + R+ + R M E G+ PD+++Y+ +I F R + ++ ++ +M ++ +
Sbjct: 425 HGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVL 484
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI L K+ A +F EM
Sbjct: 485 PDTVTYSSLIQGLCLQQKLVEAFDLFREM 513
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 116/249 (46%), Gaps = 3/249 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CKAGN+S AV + +R + + PN Y ++ + ++ ++++L +++VS
Sbjct: 354 INCMCKAGNLSRAVEIFDQMRVRGL-RPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ S Y + + + + +V+ P ++ + +I F + R++ KA
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAF 472
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + PD +TY+ ++ L ++ + + F M G+ PD ++Y +L+N
Sbjct: 473 QMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAY 532
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
L L EM + G PD +TY+ LI+ + + + RL + ++ P
Sbjct: 533 CVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDD 592
Query: 244 YVYRSLIDN 252
Y +LI+N
Sbjct: 593 VTYNTLIEN 601
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 5/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC G +S L++ +R K + +P+ YN ++ + ++ +L +++
Sbjct: 281 NSVINGLCGKGRMSEVGELVEEMRGKGL-VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV 339
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + YT + ++ + IF + V+ P +I F + +
Sbjct: 340 GKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTT-LIDGFCQKGLM 398
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A + + P ++TYN ++ +GRV + + M E G+ PD +SY+T+
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + R L EM E G+ PD +TY++LI + E+ LF +M ++ +
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI+ G++ A+ + +EM
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEM 548
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK-----IRRLDLCLIY 195
+++V+ L R+G V L G P +SYN +L+ L + R D
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
FR+M +G+ P++ TY +I G++E+ L M+++ I P++ Y +LID K
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK 254
Query: 256 MGKVDLAMTIFEEM 269
KV AM + M
Sbjct: 255 KKKVKEAMALLRAM 268
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 113/276 (40%), Gaps = 20/276 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN---AYNCVLVASAETNDIDLSFQILKDL 59
N + C G V AV +L+ + ++ LP +Y+ V+ ++ +FQ+ +++
Sbjct: 421 NALVHGYCFLGRVQEAVGILRGMVERG--LPPDVVSYSTVIAGFCRERELGKAFQMKEEM 478
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y++ + + + E+++ P + +I A+ ++
Sbjct: 479 VEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGEL 538
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
KAL + D + PD +TY+++++ L + R + VPD ++YNTL
Sbjct: 539 SKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTL 598
Query: 180 LNN-----LRKIRRL--DLCLI--------YFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ N + + L C+ F+ M + KP+ Y +I R GN+
Sbjct: 599 IENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNV 658
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
++ L+ +++ +L+ L + G D
Sbjct: 659 HKAYNLYMELEHSSFACHTVAVIALVKALAREGMND 694
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 4/272 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
MCN LCK G V AA L+ + +K I PN YN +++A ++DL+ I +
Sbjct: 451 MCNKIFLLLCKQGKVDAATSFLRMMENKGI-EPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L ++ Y+ F D I +++ + ++ N II K Q
Sbjct: 510 MLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQ 569
Query: 119 IEKALLIFDH-IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
KA + + IK + +YN ++D + G + + + M E G+ P+ +++
Sbjct: 570 TSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFT 629
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L+N K R+DL L EM +K D+ Y ALID F + +++ + LF+++ +
Sbjct: 630 SLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLEL 689
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P++ VY +LI + +GK+D A+ ++++M
Sbjct: 690 GLMPNVSVYNNLISGFRNLGKMDAAIDLYKKM 721
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 123/269 (45%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL-RDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G S A +LQ+L ++K + +YN ++ + D D + + +++
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMS 617
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + +T+ F ++ L I E+ + +I F K ++
Sbjct: 618 ENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMK 677
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + L P++ YN ++ +G+++ ++ + M G+ D +Y T++
Sbjct: 678 TAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K L L + E+ GI PD + Y L++ + G + ++ +MK++
Sbjct: 738 DGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDAT 797
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ +Y ++I + G ++ A + +EM
Sbjct: 798 PNVLIYSTVIAGHHREGNLNEAFRVHDEM 826
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSR-TLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ + + ++L++L+ R ++ Y + F D + E+
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREM 616
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ +++ +I F KS +++ AL + +K K D+ Y ++D + +
Sbjct: 617 SENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDM 676
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
F+ + E G++P+ YN L++ R + ++D + +++M GI DL TYT +
Sbjct: 677 KTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ID + GN+ + L++++ I P +Y L++ L K G+ A + EEM
Sbjct: 737 IDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEM 791
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 136/340 (40%), Gaps = 74/340 (21%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP---NAYNCVLVASAETNDIDLSFQILKDLLVS 62
++ CK ++ A+ LL+ +R+K +P Y V+VA + +++ + ++ +++
Sbjct: 281 VQAACKMKDLVMALDLLREMREKG-GVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGF 339
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+S T+ F ++ + L F + + ++ + +I F K+ ++EKA
Sbjct: 340 GIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKA 399
Query: 123 LLIFDHIKGLKCKPDLI---------------------------TY-------NIVLDIL 148
+ I+ +K + P + T+ N + +L
Sbjct: 400 VEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLL 459
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G+V+ + M+ G+ P+ + YN ++ +++ +DL F EM E G++P+
Sbjct: 460 CKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNN 519
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDM---------------------------------- 234
TY+ LID F + + + + + N M
Sbjct: 520 FTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 235 --KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
K+++ Y S+ID K G D A+ + EM+ +
Sbjct: 580 LIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSEN 619
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/235 (17%), Positives = 105/235 (44%), Gaps = 2/235 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS-DCYTNFARAFIMTDDCTQLLIFIEEV 94
++ + A+ + D+ ++ +L+++ +S + YT+ A + + + + +E+
Sbjct: 277 FSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEM 336
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V P S+I +I F ++ KAL F+ ++ PD + ++++++ + +
Sbjct: 337 VGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEM 396
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + MK G+ P + + ++ K + L F + E+ I +
Sbjct: 397 EKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIF 456
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + G ++ + M+ + I P++ Y +++ +M +DLA +IF EM
Sbjct: 457 L-LLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM 510
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N ++ A + + ++ A IF + +P+ TY+I++D + +
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVI 542
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP-----DLLTYTALID 216
M + + + YNT++N L K+ + +EM ++ IK +Y ++ID
Sbjct: 543 NQMIASNFEANEVIYNTIINGLCKVGQTSKA----KEMLQNLIKEKRYSMGCTSYNSIID 598
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
F + G+ + ++ + +M + I P++ + SLI+ K ++DLA+ + EM S
Sbjct: 599 GFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKS 653
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 74/190 (38%), Gaps = 36/190 (18%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP--- 171
+ R+ E+A+ IF + +PD + +++ + ++ + L+ M+E G VP
Sbjct: 251 RERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQ 310
Query: 172 ---------------------------------DFISYNTLLNNLRKIRRLDLCLIYFRE 198
I+ +L+ L L +F
Sbjct: 311 ETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNR 370
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M E G+ PD + ++ +I+ F + +E+++ ++ MK I PS + +I K
Sbjct: 371 MEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAES 430
Query: 259 VDLAMTIFEE 268
+ A+ IF +
Sbjct: 431 PEAALEIFND 440
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 7/214 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CK+ + A+ ++ ++ K++ L AY ++ + ND+ ++ + +LL
Sbjct: 632 INGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGL 691
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y N F + +++V + +I K + A
Sbjct: 692 MPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASD 751
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFISYNTLLN 181
++ + L PD I Y ++++ L + G R + ML E MK+ P+ + Y+T++
Sbjct: 752 LYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEE---MKKKDATPNVLIYSTVIA 808
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ L+ EM E G+ D + L+
Sbjct: 809 GHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLV 842
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ A+ ++R+++ A+ F+ + P + N VL L R +++ + M
Sbjct: 173 NYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVL 232
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV D ++ L+ + R+ + + FR + G +PD L ++ + + + ++
Sbjct: 233 IGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVM 292
Query: 227 SLRLFNDMKQQQIRP-SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L L +M+++ P S Y S+I K G ++ A+ + +EM
Sbjct: 293 ALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEM 336
>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
Length = 796
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 123/253 (48%), Gaps = 2/253 (0%)
Query: 21 LLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAF 78
Q +R + ++P+ Y+ +L D ++L DL +++ Y + +
Sbjct: 121 FFQWIRRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLADLKADKCPMTTVAYNTLIKVY 180
Query: 79 IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDL 138
+ + +E+ I N ++ ++ + Q EK L ++D ++ + C D
Sbjct: 181 GKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDR 240
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+ Y +V+ G+VGR++ F MK G P+ ++Y+ L+ K RL++ YF E
Sbjct: 241 VGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEE 300
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M I+P L T+ +LI+++ ++G +E L+ F DM+ +P++ +Y +L+D K G
Sbjct: 301 MRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGM 360
Query: 259 VDLAMTIFEEMNS 271
+D A+ +E M
Sbjct: 361 LDAALEFYERMRG 373
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/202 (16%), Positives = 85/202 (42%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
Y V+ + + +DL+ + + + ++ Y+ + + + EE+
Sbjct: 242 GYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEM 301
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ + +I A+ KS ++E L F ++ KP+L Y ++D + G +
Sbjct: 302 RSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGML 361
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ L + M+ G+ + + L+ + + + + +REM G++P T +
Sbjct: 362 DAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPSHFTCRIV 421
Query: 215 IDSFGRTGNIEESLRLFNDMKQ 236
+ + + G ++ R+ +M++
Sbjct: 422 VGAVAKGGKYDDVERILFEMQE 443
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG +L ++++ + L AYN V+ ++ +D ++Q+L+++
Sbjct: 594 IHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGL 653
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE I ++++ + +I F K +I++A L
Sbjct: 654 QPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYL 713
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P+ T+N +LD L + +++ F +MK P+ ++Y+ ++N L
Sbjct: 714 ILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLC 773
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
IR+ + ++++EM + G+KP+ +TYT +I + GN+ E+ LF+ K P
Sbjct: 774 MIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSA 833
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
Y ++I+ L K A +FEE
Sbjct: 834 CYNAMIEGLSSANKAMDAYIVFEE 857
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 35/279 (12%)
Query: 26 RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD---------------- 69
+ + P YN L+ A T ++D QIL+++ V+ LS+
Sbjct: 126 KTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLK 185
Query: 70 -------------------CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
YT A + +L ++ +I ++ + ++
Sbjct: 186 EAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLV 245
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
FA+ +I+ AL + D +K DL+ YN+ +D G+VG+V+ F MK G+V
Sbjct: 246 RVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLV 305
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++Y TL+ L K RRLD + F E+ + P + Y +I +G G +E+ L
Sbjct: 306 PDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSL 365
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
K++ PS+ Y ++ L + GKV+ A+ I +EM
Sbjct: 366 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM 404
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 17/280 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQIL-----KD 58
I+ LCKAG + AA+++ ++++ +F PN N ++ + +D + I K
Sbjct: 419 IDMLCKAGELEAALKVQDTMKEAGLF-PNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV 477
Query: 59 LLVSSRTLSS--DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
SRT S D R DD L E+++ +++V +I F K
Sbjct: 478 CSPDSRTFCSLIDGLGRRGR----VDDAYSLY---EKMLDSDQIPNVVVYTSLIQNFFKC 530
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ E I+ + C PDL+ N +D + + G V F +K G+VPD SY
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSY 590
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ L++ L K F EM E G+ D+L Y +ID F ++G ++++ +L +MK
Sbjct: 591 SILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT 650
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ ++P++ Y S++D L K+ ++D A +FEE S DL
Sbjct: 651 KGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDL 690
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
I++LCKA + A + L D + P++ C L+ +D ++ + + +L S
Sbjct: 454 IDRLCKAQKLDEACSIFLGL-DHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSD 512
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + YT+ + F +E+V ++++N + K+ ++EK
Sbjct: 513 QIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGR 572
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ IK PD+ +Y+I++ L + G + F MKE G+ D ++YNT+++
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D EM G++P ++TY +++D + ++E+ LF + K + ++
Sbjct: 633 CKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV 692
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLID K+G++D A I EE+
Sbjct: 693 VIYSSLIDGFGKVGRIDEAYLILEEL 718
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 39/263 (14%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCKA + AV L + L D N +P AYN +++ D ++ +L+ R
Sbjct: 318 LCKARRLDEAVELFEEL-DLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLE------RQK 370
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
C S+I N I+ + ++E+AL I
Sbjct: 371 RKGCIP-----------------------------SVIAYNCILTCLGRKGKVEEALRIH 401
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D ++ P+L TYNI++D+L + G + L +MKEAG+ P+ ++ N +++ L K
Sbjct: 402 DEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKA 460
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
++LD F + PD T+ +LID GR G ++++ L+ M P++ VY
Sbjct: 461 QKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVY 520
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
SLI N K G+ + I++EM
Sbjct: 521 TSLIQNFFKCGRKEDGHKIYKEM 543
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%), Gaps = 7/227 (3%)
Query: 48 DIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVN 107
D++++FQ + V +T + C + AF+M T+ L ++E++++ S + N
Sbjct: 112 DVNVAFQYFR--WVERKTQQAHCPEVY-NAFLMVMARTRNLDYLEQILEEMSVAGFGLSN 168
Query: 108 RI----IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +F KS ++++A + + ++ K +P Y ++ L R + ML F
Sbjct: 169 HVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQ 228
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+E G + + TL+ + R+D L EM + DL+ Y ID FG+ G
Sbjct: 229 MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGK 288
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ + + F++MK Q + P Y +LI L K ++D A+ +FEE++
Sbjct: 289 VDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELD 335
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 4/261 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+ G + AA+ LL ++ N F + YN + + +D++++ ++
Sbjct: 250 REGRIDAALSLLDEMKS-NSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDD 308
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
YT + + EE+ S + N +I + + + ++A + +
Sbjct: 309 VTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLER 368
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
K C P +I YN +L LGR G+V + L M++ P+ +YN L++ L K
Sbjct: 369 QKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGE 427
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L+ L M E+G+ P+++T +ID + ++E+ +F + + P + S
Sbjct: 428 LEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCS 487
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
LID L + G+VD A +++E+M
Sbjct: 488 LIDGLGRRGRVDDAYSLYEKM 508
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 51/303 (16%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AG A LL+ + K +P+ AYNC+L ++ + +I ++ D
Sbjct: 356 AGKFDEAYSLLERQKRKGC-IPSVIAYNCILTCLGRKGKVEEALRIHDEM-------RQD 407
Query: 70 CYTNFARAFIMTDD-CTQLLIFIEEVVQIASPES-----IIVVNRIIFAFAKSRQIEKAL 123
N I+ D C + VQ E+ I+ VN +I K++++++A
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEAC 467
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF + C PD T+ ++D LGR GRV+D + + M ++ +P+ + Y +L+ N
Sbjct: 468 SIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF 527
Query: 184 RKI-RRLDLCLIY----------------------------------FREMGESGIKPDL 208
K R+ D IY F E+ G+ PD+
Sbjct: 528 FKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDV 587
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+Y+ LI + G E+ +LF +MK+Q + + Y ++ID K GKVD A + EE
Sbjct: 588 RSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE 647
Query: 269 MNS 271
M +
Sbjct: 648 MKT 650
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 89/168 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I F KS +++KA + + +K +P ++TY V+D L ++ R+++ F
Sbjct: 622 VLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFE 681
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
K GV + + Y++L++ K+ R+D + E+ + G+ P+ T+ L+D+ +
Sbjct: 682 EAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAE 741
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I+E+ F +MK + P+ Y +I+ L + K + A ++EM
Sbjct: 742 EIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQ 789
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK+G V A +LL+ ++ K + P Y V+ A+ + +D ++ + ++
Sbjct: 626 NTVIDGFCKSGKVDKAYQLLEEMKTKGL-QPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 684
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L+ Y++ F + + +EE++Q + N ++ A K+ +I+
Sbjct: 685 SIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEID 744
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + F ++K LKC P+ +TY+I+++ L + + N + M++ G+ P+ I+Y T++
Sbjct: 745 EAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMI 804
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K + F SG PD Y A+I+ ++ +F + + + R
Sbjct: 805 AGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCR 864
Query: 241 PSIYVYRSLIDNLKK 255
+ L+D L K
Sbjct: 865 VNSKTCVVLLDALHK 879
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 12/205 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDID---LSFQILKDLL 60
I+ K G + A +L+ L K + PN+Y NC+L A + +ID + FQ +K+L
Sbjct: 699 IDGFGKVGRIDEAYLILEELMQKGL-TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK 757
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S ++ Y+ M + +F +E+ + + I +I AK+ +
Sbjct: 758 CSPNAMT---YSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVM 814
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD K PD YN +++ L + D F + G + + LL
Sbjct: 815 EARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLL 874
Query: 181 NNLRKIRRLDLCLI---YFREMGES 202
+ L K L+ I REM +S
Sbjct: 875 DALHKADCLEQAAIVGAVLREMAKS 899
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 125/265 (47%), Gaps = 36/265 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
++ LCK+G+ S A ++F C + +S E D D +L+ L + +T
Sbjct: 119 VKALCKSGHASEA---------HSVF------CRMWSSHEKGDRDAFVSMLEALCNAEKT 163
Query: 66 LSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ D I TD + + N I A K +Q+
Sbjct: 164 AEAIDLLHMMPEKGITTD--------------------VGMYNIIFSALGKLKQVSFMSS 203
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
++D +K PD+ TYNI++ GRVG V+ F M ++ PD I+YN+++N L
Sbjct: 204 LYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLG 263
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K LD + F++M E G PD+ TY+ LI+ FG++ ++ + LF++M Q P+I
Sbjct: 264 KNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIV 323
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L++ GK A ++E +
Sbjct: 324 TYNILLDCLERHGKTREAHKLYETL 348
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 10/264 (3%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
KAG + V L+ + K L AYN V+ A + +D K + + S+ + SD
Sbjct: 22 KAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVD------KAIFMLSKMIESD 75
Query: 70 CYTNFARAFIMTD--DCTQLLIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIF 126
C N IM D L + E++ I S + V + ++ A KS +A +F
Sbjct: 76 CQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHLNRSVYSYLVKALCKSGHASEAHSVF 135
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ K D + +L+ L + + ++ M E G+ D YN + + L K+
Sbjct: 136 CRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKL 195
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+++ + +M +G+ PD+ TY +I SFGR G ++++ LF +M +P + Y
Sbjct: 196 KQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITY 255
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMN 270
S+I+ L K G +D A +F++M
Sbjct: 256 NSMINCLGKNGDLDEAHMLFKDMQ 279
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 40/238 (16%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT R T+ + F+EE+V ++I N +I A K++ ++KA+ + +
Sbjct: 13 YTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAIFMLSKMI 72
Query: 131 GLKCKPDLITYNIVLDIL---GRVGRVNDMLN---------------------------- 159
C+P+ TY+I+LD+L G++ R+N++L+
Sbjct: 73 ESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHLNRSVYSYLVKALCKSGHASEAH 132
Query: 160 ----EFASMKEAGVVPDFISY-NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
S E G F+S L N + +DL M E GI D+ Y +
Sbjct: 133 SVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDL----LHMMPEKGITTDVGMYNII 188
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ G+ + L++ MK + P ++ Y +I + ++G VD A +FEEM+ S
Sbjct: 189 FSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDS 246
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C PD TY I++ + G+ G+ ++ M G V + I+YNT++ L K + +D +
Sbjct: 6 CDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAI 65
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+M ES +P+ TY+ ++D G + L D+ + S+Y Y L+ L
Sbjct: 66 FMLSKMIESDCQPNQFTYSIMLDVLATGGQLHR-LNEILDICSGHLNRSVYSY--LVKAL 122
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K G A ++F M SS
Sbjct: 123 CKSGHASEAHSVFCRMWSS 141
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCKAG V A + F P Y+ V+ N++D ++L+++
Sbjct: 5 NVLINGLCKAGRVCDAFTAFRKAIQFG-FRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y A + + +E + P +I II K +IE
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + D + PD+ + ++L L +GRV++ F + G PD ++YNT++
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K RL+ + + + ES P + T+T +D + GN+ + F+ M Q +
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y +LID L K GK+D+A+ + + NS
Sbjct: 244 PNTVTYDALIDGLCKAGKLDIALGLLRDKNS 274
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 98/168 (58%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + +I +K ++++AL + + L C+ + +TY+ V+D L +VGR+ D +
Sbjct: 542 NVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVL 601
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M++AG +PD ++YNTL++ K +RL + REM E+G P ++TYT L R+
Sbjct: 602 RQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRS 661
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +E++ + + M + P+ Y S++D L K G+V A+ FE+M
Sbjct: 662 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 137/267 (51%), Gaps = 15/267 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDID-LSFQILKDLLVSSR 64
+E LCKAG+ + + + ++ +++ + ++D L Q+ + LV+
Sbjct: 424 LEGLCKAGDSRRLEQCFEQMLEREWRSSSSW------PIHSPEVDFLMVQVCRPTLVTYN 477
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
TL T +++ ++ D L IE + SP+ +I N ++ K ++I A
Sbjct: 478 TL----VTGLSKSGMVRDALGLLEFMIESGL---SPD-VITFNSVLDGLCKEQRILDAHN 529
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F C+P+++TY+ ++D L ++ ++++ L A M E G + ++Y+T+++ L
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K+ R++ ++ R+M ++G PD +TY LID F + + E++ L +M + PS+
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +L L + G+ D A+ I + M +
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAA 676
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 16/276 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L K+G V A+ LL+ + + + P+ +N VL + I + + K
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLS-PDVITFNSVLDGLCKEQRILDAHNVFK--- 532
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFA 114
R L C N + D +++ L + ++V++ + + + ++
Sbjct: 533 ---RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K ++E A+++ ++ C PD +TYN ++D + R+ + + M EAG P +
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL + L + R D + M G P+ +TY++++D + G + E+L F M
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709
Query: 235 KQQQ-IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + + P + Y +LID L K G++D A E M
Sbjct: 710 ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 12/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I LC AG + + L + ++ +I+ AYN ++ A + ++ +L+++
Sbjct: 761 INGLCDAGRIDTGLELFCGMAERGCKADIY---AYNAMINAYCLKGEFSAAYALLEEMKT 817
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ + +A D + + + + + E I N +I + SR+ E+
Sbjct: 818 HGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE--ISYNTLITSLVASRRSEQ 875
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL + + PD Y V+D L + G M+ G PD +Y +++
Sbjct: 876 ALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMIS 935
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K ++L L YF EM +KPD + Y++LID+F + ++++ +L ++ I P
Sbjct: 936 GLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEP 992
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+I +Y +++D+L K D A+ + EM S
Sbjct: 993 TITMYSTMVDSLCKNRGTDKALEVIREMKS 1022
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 81/139 (58%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+P L+TYN ++ L + G V D L M E+G+ PD I++N++L+ L K +R+
Sbjct: 469 CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAH 528
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
F+ E G +P+++TY+ LID + ++E+L+L M + R + Y +++D L
Sbjct: 529 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 588
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K+G+++ A+ + +M +
Sbjct: 589 LKVGRMEDAVVVLRQMRDA 607
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L K G + AV +L+ +RD LP+A YN ++ + + + +L+++L +
Sbjct: 585 VDGLLKVGRMEDAVVVLRQMRDAGC-LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 643
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S YT + + + ++ + + I + I+ K+ ++ +AL
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 703
Query: 124 LIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
F+ + + P +I Y+ ++D L + GR+++ M AG +PD ++++ L+N
Sbjct: 704 GYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILING 763
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L R+D L F M E G K D+ Y A+I+++ G + L +MK I +
Sbjct: 764 LCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKN 823
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ +I L ++D A++ F + D
Sbjct: 824 TVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRD 856
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 41/299 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L KAGN++ A S+ + PN Y+ ++ + +D++ +L+D
Sbjct: 218 VDGLSKAGNLTGAYEFFDSMPQTGVS-PNTVTYDALIDGLCKAGKLDIALGLLRD----- 271
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQI--ASP--ESIIVVNRIIFAFAKSRQI 119
+ FA + ++ C + EE +Q+ A P +++ N ++ ++R++
Sbjct: 272 ---KNSQAGMFAFSSLLHGLCQAHRL--EEAIQLLKAMPCVPNVVCFNSLMNGLCQARRV 326
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFISYNT 178
++A +FD +K C D+ITYNI+L L ++ R+ + M+ G P+ ++++T
Sbjct: 327 DEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFST 386
Query: 179 LLNNLRKIRRLDLCL-IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ- 236
L+ L R++ +Y R + GI P+ TY L++ + G+ + F M +
Sbjct: 387 LIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLER 446
Query: 237 --------------------QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM-NSSLS 274
Q RP++ Y +L+ L K G V A+ + E M S LS
Sbjct: 447 EWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 83/182 (45%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ +Q +++ + +I + +++K + + + G C P+ +TYN +++ L G
Sbjct: 26 KAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQG 85
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R + + M G P+ I++ ++ L K ++ EM + G PD+ +T
Sbjct: 86 RAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHT 145
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L+ + G ++E+ F + P Y +++D L K G+++ A + + + S
Sbjct: 146 VLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAES 205
Query: 273 LS 274
S
Sbjct: 206 FS 207
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I K+ ++ A F +P ++TY+ V+D L R V+
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G P+ ++YNTL+N L R M +G P+L+T+ +I + G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
IE + R+ ++M + P + ++ L+ L ++G+VD A F+++
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV 167
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 7/264 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LCKAG + A L+ + R I ++ ++ + ID ++ + + R
Sbjct: 726 IDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM--AER 783
Query: 65 TLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+D Y A A+ + + + +EE+ ++ + +I A + +I++A
Sbjct: 784 GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ F I C+ D I+YN ++ L R L +M G PD +Y T+++
Sbjct: 844 VSYFHSIPE-DCR-DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDG 901
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K ++ +EM G PDL TYT +I + + + F +M ++ ++P
Sbjct: 902 LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPD 961
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIF 266
VY SLID K KVD A +
Sbjct: 962 AIVYSSLIDAFCKADKVDDAWKLL 985
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 115/266 (43%), Gaps = 6/266 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ V +LL+ + + PNA YN ++ A +F +L+ + +
Sbjct: 43 IDGLCRDNEVDKGCKLLEEMAGRGC-APNAVTYNTLVNALLGQGRAKEAFSLLERMAANG 101
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + + ++E+V + + ++ A + ++++A
Sbjct: 102 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAW 161
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F + + PD +TYN ++D L + GR+ + E+ P ++ ++ L
Sbjct: 162 FFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGL 221
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K L +F M ++G+ P+ +TY ALID + G ++ +L L D Q +
Sbjct: 222 SKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA---GM 278
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + SL+ L + +++ A+ + + M
Sbjct: 279 FAFSSLLHGLCQAHRLEEAIQLLKAM 304
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 139/315 (44%), Gaps = 66/315 (20%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCK A +L + + L +YN ++ + N ID++
Sbjct: 745 IRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIA------------ 792
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIF--------IEEVVQIASP-------ESIIVVNRI 109
D +T R D+ T LI IEE++++ + + + N I
Sbjct: 793 ---EDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTI 849
Query: 110 IFAFAKSRQIEKAL-----------------------------------LIFDHIKGLKC 134
I KS+++E+A+ +F+ + C
Sbjct: 850 ISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGC 909
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
KP+ YNI+L+ G ++ F M E G+ PD SY L++ L RL+ L
Sbjct: 910 KPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLS 969
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
YFR++ E G++PDL+ Y LID G++ IEE++ LFN+MK++ I P++Y Y SLI +L
Sbjct: 970 YFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLG 1029
Query: 255 KMGKVDLAMTIFEEM 269
K GK A ++EE+
Sbjct: 1030 KAGKASEAAQMYEEL 1044
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+Y V+ A + +D + + ++ + Y + F+ D + L +
Sbjct: 355 SYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHM 414
Query: 95 VQIA-SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
SP V I + + KS Q KA+ ++H+K PD+ N VL L R GR
Sbjct: 415 NACGPSPNGYTHVLFINY-YGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGR 473
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ F +K+ GV PD I+Y ++ K + D + +F +M E+G PD+L +
Sbjct: 474 LGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNS 533
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
LID+ + G E+ +LF+ +K+ +I P+ Y +L+ L + GKV M + EEM S+
Sbjct: 534 LIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSI 593
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 90/175 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+++ + + N ++ + E IF+ + PD+ +Y +++D L G
Sbjct: 903 EMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAG 962
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ND L+ F + E G+ PD I YN L++ L K R++ + F EM + GI P+L TY
Sbjct: 963 RLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYN 1022
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+LI G+ G E+ +++ ++ + +P+++ Y +LI G D A ++
Sbjct: 1023 SLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYD 1077
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 118/244 (48%), Gaps = 14/244 (5%)
Query: 3 NGYIEKL-----CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS--- 52
NGY L K+G A++ + ++ K I +P+ A N VL + A + + ++
Sbjct: 422 NGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGI-VPDVAAANAVLSSLARSGRLGMAKRV 480
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
F LKD+ VS T++ YT + + + F ++V+ ++ +N +I
Sbjct: 481 FYELKDMGVSPDTIT---YTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDT 537
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K + +A +F +K +K +P TYN +L LGR G+V ++++ M + P+
Sbjct: 538 LYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPN 597
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+YNT+L+ L K ++ + M E G PDL +Y ++ + EE+ R+F
Sbjct: 598 LITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFC 657
Query: 233 DMKQ 236
MK+
Sbjct: 658 QMKK 661
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 92/171 (53%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP S+ + ++ +F K R ++ L + + ++ KP++ +Y I + +LG+ R ++
Sbjct: 210 SP-SVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAY 268
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M+++G PD +++ ++ L RL F +M S KPD +TY L+D
Sbjct: 269 QILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKC 328
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +G+ + + ++N M +I Y +++D L ++G++D A+ +F+EM
Sbjct: 329 GDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEM 379
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 9/274 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I L K+G + A+ + +++ + I P+ Y+ ++V+ + D+D +L ++
Sbjct: 182 NGLIYFLVKSGFDAEAMEVYKAMVEDGIS-PSVRTYSVLMVSFGKKRDVDTVLWLLNEME 240
Query: 61 VSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ YT R D+ Q+L +E+ ++ +I +
Sbjct: 241 ARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDS---GCKPDVVTHTVVIQVLCDAG 297
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ A +F +K KPD +TY +LD G G ++ + +M G + +SY
Sbjct: 298 RLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYT 357
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ L ++ RLD L F EM E GI P+ +Y +LI F + + +L LFN M
Sbjct: 358 AVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNAC 417
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y + I+ K G+ A+ +E M S
Sbjct: 418 GPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKS 451
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 75/133 (56%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
++++Y V+D L +VGR+++ L F MKE G+ P+ SYN+L++ K D L F
Sbjct: 352 NIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELF 411
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M G P+ T+ I+ +G++G ++++ + MK + I P + +++ +L +
Sbjct: 412 NHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARS 471
Query: 257 GKVDLAMTIFEEM 269
G++ +A +F E+
Sbjct: 472 GRLGMAKRVFYEL 484
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 35/204 (17%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN------------------ 142
++I+ ++ A + ++++AL +FD +K P+ +YN
Sbjct: 351 DNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALEL 410
Query: 143 -----------------IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ ++ G+ G+ + + MK G+VPD + N +L++L +
Sbjct: 411 FNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLAR 470
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
RL + F E+ + G+ PD +TYT +I + +E++ F+DM + P +
Sbjct: 471 SGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLA 530
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
SLID L K GK + A +F ++
Sbjct: 531 LNSLIDTLYKGGKGNEAWKLFHQL 554
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
IF + V Q +P+ I +I + ++ L F + L +PDLI YN+++D L
Sbjct: 935 IFEKMVEQGINPD-IKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGL 993
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G+ R+ + + F MK+ G+VP+ +YN+L+ +L K + + E+ G KP++
Sbjct: 994 GKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNV 1053
Query: 209 LTYTALIDSFGRTGN-------------------------IEESL-----RLFNDMKQQQ 238
TY ALI + +G+ ++E+L LF +MK++
Sbjct: 1054 FTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRG 1113
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
P + Y ++D + K +++ + + EE+ L+ L
Sbjct: 1114 CGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAEDLNQL 1151
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/305 (17%), Positives = 126/305 (41%), Gaps = 36/305 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LC+ G + A+ + +++K I +YN ++ + + D + ++ +
Sbjct: 360 VDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGP 419
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + + F + + + + E + + N ++ + A+S ++ A
Sbjct: 420 SPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKR 479
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI---------- 174
+F +K + PD ITY +++ + + ++ +N F+ M E G VPD +
Sbjct: 480 VFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLY 539
Query: 175 -------------------------SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+YNTLL+ L + ++ + EM S P+L+
Sbjct: 540 KGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLI 599
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY ++D + G + ++ + M ++ P + Y +++ L K + + A +F +M
Sbjct: 600 TYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM 659
Query: 270 NSSLS 274
L+
Sbjct: 660 KKILA 664
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD ++ K ++ T+ V +G G + M+EAG+ + +YN L+ L
Sbjct: 130 VFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLV 189
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + ++ M E GI P + TY+ L+ SFG+ +++ L L N+M+ + ++P++Y
Sbjct: 190 KSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVY 249
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y I L + + D A I +M S
Sbjct: 250 SYTICIRVLGQAARFDEAYQILGKMEDS 277
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN ++ L + G + + + +M E G+ P +Y+ L+ + K R +D L EM
Sbjct: 180 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEM 239
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G+KP++ +YT I G+ +E+ ++ M+ +P + + +I L G++
Sbjct: 240 EARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRL 299
Query: 260 DLAMTIFEEMNSS 272
A +F +M +S
Sbjct: 300 SDAKDVFWKMKAS 312
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 125/305 (40%), Gaps = 46/305 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L + G V + LL+ + +I PN YN VL ++ +++ + +L +
Sbjct: 567 NTLLSGLGREGKVKEVMHLLEEMT-HSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMT 625
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y I + + ++ +I +P+ + I+ +F K+ ++
Sbjct: 626 EKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCT-ILPSFVKNGLMK 684
Query: 121 KAL-LIFDHIKGLKCKPDLITYNIVLD-ILGRVG-------------------------- 152
+AL + ++I C D +++ +++ IL + G
Sbjct: 685 EALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPL 744
Query: 153 -----------RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+ + N+F + GV SYN+L+ L +D+ F EM
Sbjct: 745 IRHLCKHKKALEAHQLFNKFKGL---GVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKR 801
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G PD TY ++D+ G++ IEE LR+ +M ++ + Y ++I L K +++
Sbjct: 802 LGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQ 861
Query: 262 AMTIF 266
A+ ++
Sbjct: 862 AIDLY 866
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N +L+++ GRV DM F M++ V + ++ T+ + + L + M E
Sbjct: 112 NYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMRE 171
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
+G+ + TY LI ++G E++ ++ M + I PS+ Y L+ + K VD
Sbjct: 172 AGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDT 231
Query: 262 AMTIFEEMNS 271
+ + EM +
Sbjct: 232 VLWLLNEMEA 241
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K+ + AV L ++ K I +PN YN +++ + + Q+ ++LL+
Sbjct: 990 IDGLGKSERIEEAVCLFNEMKKKGI-VPNLYTYNSLILHLGKAGKASEAAQMYEELLIKG 1048
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y R + ++ + V + + +I I A
Sbjct: 1049 WKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAV-----GVSLKTALISGLVDENLINIAE 1103
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+F +K C PD TYN++LD +G+ R+ +ML
Sbjct: 1104 GLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEML 1138
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-------AETNDI--------- 49
I+ CKAG + A L + +R L+ + + NDI
Sbjct: 265 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 324
Query: 50 ---DLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
D+++ L D L + +S + +A+ +D F E +P +++
Sbjct: 325 RPNDVTYGALVDGLCKAGNISKA-FEVYAKLIGTSDSADSDFYFPCEDRHTLAP-NVVTY 382
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
++ K+ +++ A + D + C+P+ I Y+ ++D + G+++ F M +
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +P +Y +L++ + K RLDL + +M + P+++TYTA+ID R G E+
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L+L + M+++ P++ Y +LID L K GK+DL++ +F +M+
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 546
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 19/279 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC G A +L++ + K F+P+ Y+ V+ ++ +F + +++ + T
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKG-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 256
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
YT +F Q EE+ + +++ +I A+ K++Q+ +A IF
Sbjct: 257 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 316
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM----------------KEAGVV 170
+ C+P+ +TY ++D L + G ++ +A + +
Sbjct: 317 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 376
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ ++Y L++ L K ++D M SG +P+ + Y ALID F + G I+ + +
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M + PS++ Y SLID + K G++DLAM + +M
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+DL+ +I ++L ++ L+ NFAR + I+E+++ ++
Sbjct: 169 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 228
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + ++EKA L+F +K + PD+ TY I++D + G + F M+ G
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P ++Y L++ K +++ F M ++G +P+ +TY AL+D + GNI ++
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348
Query: 229 RLFNDM----------------KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ + + + P++ Y +L+D L K KVD A + + M SS
Sbjct: 349 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 408
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 52/284 (18%)
Query: 6 IEKLCKAGNVSAAVRLLQSL---------------RDKNIFLPN--AYNCVLVASAETND 48
++ LCKAGN+S A + L D++ PN Y ++ + +
Sbjct: 335 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 394
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+D + ++L +L SS C N IV +
Sbjct: 395 VDHAHELLDAML------SSGCEPNH-----------------------------IVYDA 419
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K+ +I+ A +F + P + TY ++D + + GR++ + + M +
Sbjct: 420 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 479
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ ++Y +++ L +I + L M E G P+++TYTALID G+ G I+ SL
Sbjct: 480 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 539
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF M ++ P+ YR LI++L G +D A + EM +
Sbjct: 540 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 583
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 41/204 (20%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI---------------VLDI---- 147
N ++ ++ + A + + + C P + YNI +LD+
Sbjct: 116 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 175
Query: 148 ----------------------LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
L VG+ + M G VPD +Y+ ++ L
Sbjct: 176 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 235
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+++ + F+EM G+ PD+ TYT LIDSF + G IE++ LF +M+ P++
Sbjct: 236 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 295
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI K +V A IF M
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRM 319
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 131/315 (41%), Gaps = 38/315 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CKAG + +A + + K +LP + Y ++ + +DL+ ++L +L S
Sbjct: 421 IDGFCKAGKIDSAQEVFLQMT-KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 479
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + YT + + L + + + +++ +I K+ +I+ +L
Sbjct: 480 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 539
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE-------------------- 160
+F + C P+ +TY ++++ L G ++ +L E
Sbjct: 540 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 599
Query: 161 ----------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE--SGIKPDL 208
M+ G VP Y L++ K RL++ + +EM E S +K D
Sbjct: 600 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 659
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y +LI + +EE+ RL+++M ++ P + V+ LI L ++ K D A+ +
Sbjct: 660 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYG 719
Query: 269 MNSSLSDLAGPKDFK 283
+ + G K F
Sbjct: 720 ICHEGVNWQGNKSFH 734
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ +P+ ++Y TLL+ K ++L C M G P+ + +L+ S+ +
Sbjct: 68 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 127
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK------VDLAMTIFEEM 269
+ +L N M P VY I ++ K +DLA I+ EM
Sbjct: 128 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 179
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 3/176 (1%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
+ P +++ N ++ KS +IE+A + + C PD ITY ++ L R R +D
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 690
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
L + +K G PD ++YN L++ L K + + + EM G PD++TY LID
Sbjct: 691 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750
Query: 217 SFGRTGNIEESLRLFNDMKQQQIR---PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S + G++EE+ RL DM + R P++ Y LI+ L K+G++D A + +EM
Sbjct: 751 SLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEM 806
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ L + G A LL ++ D + + A+NC + ++ D+ + Q+ +L
Sbjct: 508 IDGLFRTGRAGQAEALLDAMPDPDTY---AFNCCINGLSKLGDVSRALQVYNRMLELELV 564
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ + Q EE+V ++ +I K+ Q+E A I
Sbjct: 565 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 624
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
D + L P+++TYN ++ L + GR+ + M +G VPD I+Y +L+ L +
Sbjct: 625 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
R D L E+ G PD +TY L+D ++G E+++ + +M + P +
Sbjct: 685 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT 744
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
Y +LID+L K G ++ A + +M+S +S P
Sbjct: 745 YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVP 778
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 139/279 (49%), Gaps = 19/279 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK+ + A + L + L ++ P+ YN ++ + + D++ + ++ D+
Sbjct: 220 NTIINGLCKSNELGAGMELFEELVERG-HHPDVVTYNTLIDSLCKAGDLEEARRLHGDM- 277
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE--EVVQIASPES------IIVVNRIIFA 112
SSR+ C N ++ + ++ E E++Q + +S II N +
Sbjct: 278 -SSRS----CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDG 332
Query: 113 FAKSRQIEKALLIFDHIK--GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K +A + ++ L+ PD +T++ ++D L + G++++ + F M G V
Sbjct: 333 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 392
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ I+YN L+N L K +++ M + G+ PD++TY+ L+D+F + ++E+L L
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 452
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + P++ + S+ID L K + A +F++M
Sbjct: 453 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM 491
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 139/277 (50%), Gaps = 16/277 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L K+G A+ +L+ + K P+ YN ++ + + D++ + ++ D+ SS
Sbjct: 714 VDGLWKSGQTEQAITVLEEMVGKG-HHPDVVTYNTLIDSLCKAGDLEEARRLHGDM--SS 770
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIE--EVVQIASPES------IIVVNRIIFAFAK 115
R +S C N ++ + ++ E E++Q +S II N + K
Sbjct: 771 R-VSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829
Query: 116 SRQIEKALLIFDHIK--GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ +A + ++ L+ PD +T++ ++D L + G+ ++ N F M G VP+
Sbjct: 830 QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNV 889
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YN L+N L K +++ M + G+ PD++TY+ L+D+F + +++E+L L +
Sbjct: 890 VTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHG 949
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
M + P++ + S+ID L K + A +F++M
Sbjct: 950 MASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMT 986
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 141 YNIVLDILGRVGRVNDMLNEF-ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
YNIVL L R G L F M GV P ++YNT++N L K L + F E+
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
E G PD++TY LIDS + G++EE+ RL DM + P++ Y LI+ L K+G++
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302
Query: 260 DLAMTIFEEMNSSLSDL 276
D A + +EM D+
Sbjct: 303 DEARELIQEMTRKSCDV 319
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 12/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI-FLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
I LCK G + A L+Q + K+ LPN YN L + + + ++++ L
Sbjct: 293 INGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG 352
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQL---LIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S +S D T F+ C Q+ ++++ ++I N ++ K+ ++
Sbjct: 353 SLRVSPDTVT-FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A + + + PD+ITY++++D + RV++ L M G P+ +++N++
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 471
Query: 180 LNNLRKIRRLDLCLIYFREMG-ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L K R F +M + G+ PD +TY LID RTG ++ L + M
Sbjct: 472 IDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD-- 529
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y + I+ L K+G V A+ ++ M
Sbjct: 530 --PDTYAFNCCINGLSKLGDVSRALQVYNRM 558
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
L IF E+ + +I+ N II KS ++ + +F+ + PD++TYN ++D
Sbjct: 200 LEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLID 259
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG--I 204
L + G + + M VP+ ++Y+ L+N L K+ R+D +EM +
Sbjct: 260 SLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV 319
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR--PSIYVYRSLIDNLKKMGKVDLA 262
P+++TY + +D + E+ L ++ +R P + +LID L K G++D A
Sbjct: 320 LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEA 379
Query: 263 MTIFEEM 269
++F++M
Sbjct: 380 CSVFDDM 386
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 131/296 (44%), Gaps = 32/296 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNA--YNCVLVASAETNDIDLSFQILKDL 59
N +++ LCK ++ A L++SLRD ++ + P+ ++ ++ + D + + D+
Sbjct: 821 NSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDM 880
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y TD + IE +V +I + ++ AF K+ +
Sbjct: 881 IAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHV 940
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-EAGVVPDFISYNT 178
++AL + + C P+++T+N ++D L + + + F M + G+ PD I+Y T
Sbjct: 941 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCT 1000
Query: 179 LLNNLRKIRR------------------LDLCLIYFREMG----------ESGIKPDLLT 210
L++ L + + C+ ++G E + PD +T
Sbjct: 1001 LIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVT 1060
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ LI + GN E++ LF +M + ++P + + +LID L K G+V+ I
Sbjct: 1061 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 121/272 (44%), Gaps = 6/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+AG + A+ + + ++ P YN ++ ++N++ ++ ++L+
Sbjct: 187 LQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERG 246
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + D + ++ + +++ + +I K +I++A
Sbjct: 247 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEAR 306
Query: 124 LIFDHIKGLKCK--PDLITYNIVLDILGRVGRVNDMLNEFASMKEAG--VVPDFISYNTL 179
+ + C P++ITYN LD L + + S+++ V PD ++++TL
Sbjct: 307 ELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTL 366
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K ++D F +M G P+++TY AL++ + +E + + M + +
Sbjct: 367 IDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGV 426
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y L+D K +VD A+ + M S
Sbjct: 427 TPDVITYSVLVDAFCKASRVDEALELLHGMAS 458
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 130/313 (41%), Gaps = 45/313 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LCK+G + A + L+ + +P++ Y ++ A + D + Q++ +L
Sbjct: 641 NALVHGLCKSGRIEEACQFLEEMVSSGC-VPDSITYGSLVYALCRASRTDDALQLVSELK 699
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + Q + +EE+V ++ N +I + K+ +E
Sbjct: 700 SFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLE 759
Query: 121 KALLIFDHIKGLK---CKPDLITYNIVLDILGRVGRVN---------------------- 155
+A + + C P+++TY+++++ L +VGR++
Sbjct: 760 EARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIIT 819
Query: 156 -----DMLNEFASMKEAG------------VVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
D L + + M EA V PD ++++TL++ L K + D F +
Sbjct: 820 YNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD 879
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M G P+++TY L++ +T +E + + M + + P + Y L+D K
Sbjct: 880 MIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939
Query: 259 VDLAMTIFEEMNS 271
VD A+ + M S
Sbjct: 940 VDEALELLHGMAS 952
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 5/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKAG + AAVR+ +S+ + + PN Y+ ++ + +D + ++L + +
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGL-APNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + Y + D F +E+++ + N +I F K+ + A
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD + +C P+++TY ++ L + ++ + MKE G PD Y++L++ L
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +L+ + F EM SG+ + T T LI + ++E++ LFN ++++ + P
Sbjct: 360 CKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHP 417
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y S+I L K GKV+ +++EM
Sbjct: 418 YAYNSIISALIKSGKVNEGQAVYQEM 443
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G + A+ LL+ + D N P+ Y ++ + ++++ K++
Sbjct: 73 NALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMA 131
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + CYT R + Q + + ++ ++ +I K+ +I
Sbjct: 132 SRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIG 191
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ IF ++ P+ + Y+ ++ L + +++ L A MK+A PD I+YN L+
Sbjct: 192 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 251
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + +F EM E+G KPD+ TY LI F + GN + + +F+DM +
Sbjct: 252 DGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCS 311
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +LI L K ++ A ++ M
Sbjct: 312 PNVVTYGTLISGLCKRRQLTKASLYYQHM 340
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I I+ AK+++I++A+ + + I C P + TYN +L+ L ++GR+ + ++
Sbjct: 34 IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 93
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ + G PD ++Y +L++ L K +R F+EM G+ D + YTALI + G
Sbjct: 94 KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAG 153
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I ++ ++ M Q P + ++ID L K G++ A+ IF+ M +
Sbjct: 154 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 202
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ + +E++ +I N ++ K ++E+A+ + I C PD++TY ++
Sbjct: 52 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 111
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
D LG+ R + F M G+ D + Y L+ L + ++ ++ M G
Sbjct: 112 DGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV 171
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD++T + +ID + G I ++R+F M+ + + P+ VY +LI L K K+D A+ +
Sbjct: 172 PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 231
Query: 266 FEEMNSSL 273
+M +
Sbjct: 232 LAQMKKAF 239
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C D+ TY ++D L + ++ + + + G P +YN LLN L K+ RL+ +
Sbjct: 30 CTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 89
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
R++ ++G PD++TYT+LID G+ E+ +LF +M + + Y +LI L
Sbjct: 90 DLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 149
Query: 254 KKMGKVDLAMTIFEEMNS 271
+ GK+ A ++++ M S
Sbjct: 150 LQAGKIPQASSVYKTMTS 167
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
T++I+++ L + G + + G D +Y T+++ L K +++ + ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+G P + TY AL++ + G +EE++ L + P + Y SLID L K +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 260 DLAMTIFEEMNS 271
A +F+EM S
Sbjct: 121 FEAYKLFKEMAS 132
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L G +L + + P+ Y+ ++ A + D + Q+L ++
Sbjct: 165 NSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMK 224
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT F +D L EE+ + +I K+ +I+
Sbjct: 225 EIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRID 284
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A F ++ C+PD + N +++ LG+ GR++D + F M+ +P ++YNT++
Sbjct: 285 EAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTII 344
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R +F M ESGI P TY+ LID F +T +E+++ L +M ++
Sbjct: 345 KALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF 404
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y SLID L K + DLA +F+E+ +
Sbjct: 405 PPCPAAYCSLIDALGKAKRYDLACELFQELKEN 437
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 10/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAET----NDIDLSFQIL 56
N I L KAG + A++L Q + +P+ YN ++ A E+ +++ F+ +
Sbjct: 306 NNMINFLGKAGRLDDAMKLFQEMETLRC-IPSVVTYNTIIKALFESKSRASEVPSWFERM 364
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K+ +S SS Y+ F T+ + ++ +EE+ + P +I A K+
Sbjct: 365 KESGISP---SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 421
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ + A +F +K Y +++ LG+ GR++D +N F M + G PD +Y
Sbjct: 422 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 481
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ L + LD L R M E G PD+ +Y +++ +TG ++ + ++MKQ
Sbjct: 482 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 541
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+RP + Y +++ L G + A + +EMN+
Sbjct: 542 STVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNT 576
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 12/192 (6%)
Query: 86 QLLIFIEEVVQ----IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
++ I+E+V+ + +P + V R++ ++ + +A+ IF IK KC+P Y
Sbjct: 108 EMWKMIQEMVRNPICVVTPTELSDVVRML---GNAKMVRQAITIFYQIKTRKCQPIAQAY 164
Query: 142 NIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
N ++ +L G+ +V+ + NE ++ E PD ++Y+ L++ K+ R D + E
Sbjct: 165 NSMIIMLMHEGQYEKVHQLYNEMST--EGHCFPDTVTYSALISAFCKLGRRDSAIQLLNE 222
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M E G++P YT LI F + + +L LF +M+ Q RP ++ Y LI L K G+
Sbjct: 223 MKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGR 282
Query: 259 VDLAMTIFEEMN 270
+D A F EM
Sbjct: 283 IDEAYHFFCEMQ 294
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 39/260 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK + A+ LL+ + +K P AY ++ A + DL+ ++ ++L
Sbjct: 380 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL----- 434
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+C ++ AR + + +I K+ +++ A+
Sbjct: 435 --KENCGSSSARVYAV----------------------------MIKHLGKAGRLDDAIN 464
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD + L C PD+ YN ++ L R G +++ L+ M+E G +PD SYN +LN L
Sbjct: 465 MFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLA 524
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + M +S ++PD+++Y ++ + G EE+ +L +M +
Sbjct: 525 KTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLI 584
Query: 245 VYRSLIDNLKKMGKVDLAMT 264
Y S+ L+ +GKVD T
Sbjct: 585 TYSSI---LEAIGKVDHEYT 601
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 18/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLL-----QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL- 59
I L KAG + A + R +F+ N N L + +D FQ ++ L
Sbjct: 274 IRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMIN-FLGKAGRLDDAMKLFQEMETLR 332
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+V+ T+ + + +RA +++ + E + + S + +I F K
Sbjct: 333 CIPSVVTYNTIIKALFESKSRA-------SEVPSWFERMKESGISPSSFTYSILIDGFCK 385
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ ++EKA+++ + + P Y ++D LG+ R + F +KE
Sbjct: 386 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 445
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y ++ +L K RLD + F EM + G PD+ Y AL+ RTG ++E+L M+
Sbjct: 446 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 505
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y +++ L K G AM + M S
Sbjct: 506 EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 542
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-------AETNDI--------- 49
I+ CKAG + A L + +R L+ + + NDI
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389
Query: 50 ---DLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
D+++ L D L + +S + +A+ +D F E +P +++
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKA-FEVYAKLIGTSDSADSDFYFPCEDRHTLAP-NVVTY 447
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
++ K+ +++ A + D + C+P+ I Y+ ++D + G+++ F M +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +P +Y +L++ + K RLDL + +M + P+++TYTA+ID R G E+
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L+L + M+++ P++ Y +LID L K GK+DL++ +F +M+
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 19/279 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC G A +L++ + K F+P+ Y+ V+ ++ +F + +++ + T
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKG-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
YT +F Q EE+ + +++ +I A+ K++Q+ +A IF
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM----------------KEAGVV 170
+ C+P+ +TY ++D L + G ++ +A + +
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 441
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ ++Y L++ L K ++D M SG +P+ + Y ALID F + G I+ + +
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M + PS++ Y SLID + K G++DLAM + +M
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+DL+ +I ++L ++ L+ NFAR + I+E+++ ++
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + ++EKA L+F +K + PD+ TY I++D + G + F M+ G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P ++Y L++ K +++ F M ++G +P+ +TY AL+D + GNI ++
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413
Query: 229 RLFNDM----------------KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ + + + P++ Y +L+D L K KVD A + + M SS
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 52/284 (18%)
Query: 6 IEKLCKAGNVSAAVRLLQSL---------------RDKNIFLPN--AYNCVLVASAETND 48
++ LCKAGN+S A + L D++ PN Y ++ + +
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+D + ++L +L SS C N IV +
Sbjct: 460 VDHAHELLDAML------SSGCEPNH-----------------------------IVYDA 484
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K+ +I+ A +F + P + TY ++D + + GR++ + + M +
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 544
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ ++Y +++ L +I + L M E G P+++TYTALID G+ G I+ SL
Sbjct: 545 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 604
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF M ++ P+ YR LI++L G +D A + EM +
Sbjct: 605 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 41/204 (20%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI---------------VLDI---- 147
N ++ ++ + A + + + C P + YNI +LD+
Sbjct: 181 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 240
Query: 148 ----------------------LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
L VG+ + M G VPD +Y+ ++ L
Sbjct: 241 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 300
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+++ + F+EM G+ PD+ TYT LIDSF + G IE++ LF +M+ P++
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI K +V A IF M
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRM 384
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 131/315 (41%), Gaps = 38/315 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CKAG + +A + + K +LP + Y ++ + +DL+ ++L +L S
Sbjct: 486 IDGFCKAGKIDSAQEVFLQMT-KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 544
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + YT + + L + + + +++ +I K+ +I+ +L
Sbjct: 545 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 604
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE-------------------- 160
+F + C P+ +TY ++++ L G ++ +L E
Sbjct: 605 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664
Query: 161 ----------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE--SGIKPDL 208
M+ G VP Y L++ K RL++ + +EM E S +K D
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 724
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y +LI + +EE+ RL+++M ++ P + V+ LI L ++ K D A+ +
Sbjct: 725 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYG 784
Query: 269 MNSSLSDLAGPKDFK 283
+ + G K F
Sbjct: 785 ICHEGVNWQGNKSFH 799
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ +P+ ++Y TLL+ K ++L C M G P+ + +L+ S+ +
Sbjct: 133 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 192
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK------VDLAMTIFEEM 269
+ +L N M P VY I ++ K +DLA I+ EM
Sbjct: 193 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 244
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 5/144 (3%)
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL-RK 185
D +K +P +TYN ++ +L G+V+ M E+G D + + L ++
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
R D + RE K D + T +I +E++ + M+ P++
Sbjct: 89 GRWADALDMIERE----DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
YR+L+ K ++ I M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMM 168
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
+++LCKA + A ++ +S + C L+ + +D ++++ + +L +
Sbjct: 164 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 223
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT+ R F + +E+++ + ++N + K+ ++EK +
Sbjct: 224 NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 283
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF+ I+ PD+ +Y+I++ L + G+ + N F +MK+ G D +YN +++
Sbjct: 284 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 343
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++ EM E ++P + TY A++D + ++E+ LF + K + I ++
Sbjct: 344 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLID K+G++D A I EEM
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEM 428
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + +++ + L AYN V+ ++ + +++IL+++
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y D + + EE ++++ + +I F K +I++A L
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 423
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N +LD L + +N+ L F SMKE P+ +Y+ L+N L
Sbjct: 424 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 483
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++++ + +++++M + G+ P+++TYT +I + GNI ++ LF K P
Sbjct: 484 RVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 543
Query: 245 VYRSLIDNLKKMGKVDLAMTIFE 267
+ +LI+ M + AM ++
Sbjct: 544 SFNALIEG---MSNANRAMEAYQ 563
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 5/279 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ + KAG V + + +R FLP+ +Y+ ++ + + I +
Sbjct: 266 NTYMDCVFKAGEVEKGRMIFEDIRSYG-FLPDVRSYSILIHGLTKAGQARETSNIFHAMK 324
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + Y F + + +EE+ + ++ I+ AK +++
Sbjct: 325 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 384
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++F+ K + +++ Y+ ++D G+VGR+++ M + G+ P+ ++N+LL
Sbjct: 385 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ L+ F+ M E P+ TY+ LI+ R ++ + DM++Q +
Sbjct: 445 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 504
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE--EMNSSLSDLA 277
P++ Y ++I L K+G + A ++FE + N + D A
Sbjct: 505 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 543
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 37/262 (14%)
Query: 9 LCKAGNVSAAVRLLQSLR-DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCKAG + A L + ++++ AYN +++ + ++++L
Sbjct: 28 LCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLL----------- 76
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
E + + S++ N I+ K R++++AL +F+
Sbjct: 77 ------------------------ERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE 112
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K +P+ TYNI++D+L GRV + M+ A + P+ ++ N +++ L K R
Sbjct: 113 VMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 171
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+L+ F + G PD +TY +LID G+ G ++E+ RLF M + VY
Sbjct: 172 KLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 231
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
SLI N G+ + IF+E+
Sbjct: 232 SLIRNFFIHGRKEDGHKIFKEL 253
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N ++ CK+G V A +L+ +++K + A Y ++ A+ + +D ++ + ++
Sbjct: 336 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS 395
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L+ Y++ F + + +EE+++ ++ N ++ A K+ +I +
Sbjct: 396 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 455
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL+ F +K +KC P+ TY+I+++ L RV + N + M++ G+VP+ ++Y T+++
Sbjct: 456 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMIS 515
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
L K+ + F +G PD ++ ALI+
Sbjct: 516 GLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 551
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F E Q P+ + + +I+ K+ ++ +A +F ++ + P YN ++ G
Sbjct: 6 FHELKAQGLKPDDVSYTS-MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR------------ 197
GR D ++E G +P +S+N++L L K R++D L F
Sbjct: 65 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSST 124
Query: 198 ----------------------EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
EM + + P+LLT ++D + +EE+ ++F
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Q+ P Y SLID L K G+VD A +FE+M
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 218
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+F E+ G+KPD ++YT++I + G + E+ LF M+ ++ P Y Y ++I
Sbjct: 5 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64
Query: 255 KMGKVDLAMTIFEEM 269
G+ + A + E +
Sbjct: 65 SAGRFEDAYKLLERL 79
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 139/271 (51%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN SAA+RLL S+ KN PN AYN ++ + + + +F + +++ +
Sbjct: 173 INGLCKVGNTSAAIRLLGSMVQKNC-QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV--T 229
Query: 64 RTLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ +S D +T + + + C + + E+V ++ N ++ A K ++ +
Sbjct: 230 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 289
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + D + +P+++TY ++D + +++ + F +M G +P+ ISYNTL+N
Sbjct: 290 AHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLIN 349
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
KI+R+D + F EM + PD +TY+ LI +++++ LF++M P
Sbjct: 350 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 409
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ YR L+D L K + AM + + + S
Sbjct: 410 NLVTYRILLDYLCKNRYLAEAMALLKAIEGS 440
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 3/278 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC LL + D I +P+ ++N V+ A + + + ++ ++
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKI-MPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT + + + + + +V ++I N +I + K ++I+
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ +F + + PD +TY+ ++ L V R+ D + F M +P+ ++Y LL
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R L + + + S + PD+ ID R G +E + LF+++ + ++
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 478
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
P ++ Y +I+ L + G +D A +F EM+ + L G
Sbjct: 479 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 516
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 33 PNAYNC-VLVAS-AETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN Y +L+ S N + +F +L +L + +T R + + L
Sbjct: 94 PNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHL 153
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ ++ +I K A+ + + C+P++ YN ++D L +
Sbjct: 154 FDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK 213
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V + N F+ M G+ PD +YN+L++ L + EM +S I PD+++
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++D+ + G + E+ + + M Q+ + P++ Y +L+D + ++D A+ +F+ M
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++++ P S + N+++ + AK + L + + P++ T +I+++ + R
Sbjct: 52 MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNR 111
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V + A + + G PD ++ TL+ + ++ L F +M G +PD++TY
Sbjct: 112 VGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGT 171
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ + GN ++RL M Q+ +P+++ Y ++ID+L K +V A +F EM
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
+ LL ++ P +I ++ +I +F ++ A + I L +PD T+ +
Sbjct: 78 STLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTL 137
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+ + G++ + L+ F M G PD ++Y TL+N L K+ + M +
Sbjct: 138 IRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC 197
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+P++ Y +IDS + + E+ LF++M + I P I+ Y SLI L + + T
Sbjct: 198 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT 257
Query: 265 IFEEM 269
+ EM
Sbjct: 258 LLNEM 262
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/269 (16%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK G V+ A ++ + + + PN Y ++ +++D + ++ ++
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGV-EPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + + E+ + + + +I +++
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 393
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ +F + P+L+TY I+LD L + + + + +++ + + PD N +
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 453
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + L+ F + G++PD+ TY+ +I+ R G ++E+ +LF +M +
Sbjct: 454 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 513
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +Y ++ + + A+ + +EM
Sbjct: 514 LNGCIYNTITRGFLRNNETSRAIQLLQEM 542
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 104 IVVNRI-IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I VN I I ++ ++E A +F ++ +PD+ TY+I+++ L R G +++ F
Sbjct: 446 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 505
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G + YNT+ + + +EM G D T T + G
Sbjct: 506 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565
Query: 223 NIEESLR 229
+++SL+
Sbjct: 566 -LDQSLK 571
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 122/235 (51%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN +L A ++ I+ F++ + ++ SS ++ + + ++ + L ++
Sbjct: 827 TYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDL 886
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V + ++ KS ++E+A +F+ + C+P+ YNI+++ G+ G V
Sbjct: 887 VSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDV 946
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
N F M G+ PD SY +L+ L + R+D L YF ++ ++G+ D + Y +
Sbjct: 947 NTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLM 1006
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ID GR+ IEE+L L+++M+ + I P ++ Y SLI NL G V+ A ++EE+
Sbjct: 1007 IDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL 1061
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCKAGN+ A LL +R + + LPN YN ++ N +D + + ++
Sbjct: 376 VNALCKAGNIDEAFHLLDVMRKQGV-LPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y F + + + L E++ +I+ N +++ A+ ++ +A
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+IF+ +K PD +TYN+++ + G+V++ + + M E PD I N+L+N L
Sbjct: 495 VIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL 554
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D F + + + P ++TY LI G+ G ++ ++ LF M P+
Sbjct: 555 YKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT 614
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +++D L K +VDLA+ + +M +
Sbjct: 615 ITFNTILDCLCKNDEVDLALKMLYKMTT 642
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 117/239 (48%), Gaps = 2/239 (0%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN +N ++ ++N +D + + DL+ + + Y + + +
Sbjct: 858 PNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKEL 917
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
EE+V + + N +I F K+ + A +F + +PDL +Y ++ L
Sbjct: 918 FEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCE 977
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GRV+D L+ F +K+ G+ D I+YN +++ L + R++ L + EM GI PDL T
Sbjct: 978 AGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFT 1037
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI + G G +E++ +L+ +++ + P+++ Y +LI G D A +++ M
Sbjct: 1038 YNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 100/182 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+EE+ + +I I ++ +I++A I ++ C PD++TY +++D L
Sbjct: 251 LLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALC 310
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
G+++D + F MK + PD ++Y T+L+ L ++ EM G PD++
Sbjct: 311 TAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVI 370
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T L+++ + GNI+E+ L + M++Q + P+++ Y +LI L ++ ++D A+ +F M
Sbjct: 371 TFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNM 430
Query: 270 NS 271
+
Sbjct: 431 ET 432
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+FI ++ ++ N +I F E A +F +K C PD+ TYN++LD
Sbjct: 776 VFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAH 835
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G+ G++N++ + M + P+ I++N ++ NL K LD L F ++ P
Sbjct: 836 GKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTP 895
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY L+D ++G +EE+ LF +M RP+ +Y LI+ K G V+ A +F+
Sbjct: 896 CTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKR 955
Query: 269 M 269
M
Sbjct: 956 M 956
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+ + N ++ A KS +I + +++ + CKP+ IT+NI++ L +
Sbjct: 815 EMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSN 874
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++ L+ F + P +Y LL+ L K RL+ F EM + G +P+ Y
Sbjct: 875 SLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYN 934
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LI+ FG+TG++ + LF M ++ IRP + Y SL+ L + G+VD A+ FE++ +
Sbjct: 935 ILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQT 994
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 2/187 (1%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL-LIFDHIKGLKCKPDLITYNIV 144
+L E+++ + + I N II KS ++KAL L +D + G P TY +
Sbjct: 843 ELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG-DFSPTPCTYGPL 901
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
LD L + GR+ + F M + G P+ YN L+N K ++ F+ M GI
Sbjct: 902 LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+PDL +YT+L+ G ++++L F +KQ + Y +ID L + +++ A+T
Sbjct: 962 RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021
Query: 265 IFEEMNS 271
+++EM S
Sbjct: 1022 LYDEMQS 1028
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 80/137 (58%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+IT+ I+++ L + G +++ + M++ GV+P+ +YNTL++ L ++ RLD L
Sbjct: 367 PDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDL 426
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F M G+ P TY ID +G++G +++L F MK + I P+I + + +L +
Sbjct: 427 FNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAE 486
Query: 256 MGKVDLAMTIFEEMNSS 272
MG++ A IF + S+
Sbjct: 487 MGRLREAKVIFNRLKSN 503
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 131/278 (47%), Gaps = 21/278 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I L ++G A+ + + + + + P+ ++ ++VA+ + D + +L+++
Sbjct: 198 NGLIHLLLQSGLCREALEMYRRMVLEGL-KPSLKTFSALMVATGKRRDTETVKSLLEEM- 255
Query: 61 VSSRTLSSDCYTN------FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
S L + YT RA + + C ++ + ++ +I A
Sbjct: 256 -ESLGLKPNIYTYTICIRVLGRAGRIDEACR----IMKRMEDDGCGPDVVTYTVLIDALC 310
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVP 171
+ +++ A+ +F +K KPD +TY +LD G +GRV + +E M+ G P
Sbjct: 311 TAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSE---MEADGYAP 367
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I++ L+N L K +D M + G+ P+L TY LI R ++++L LF
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N+M+ + P+ Y Y ID K G+ D A+ FE+M
Sbjct: 428 NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKM 465
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 126/266 (47%), Gaps = 4/266 (1%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
+I+ K+G A+ + ++ + I PN A N L + AE + + I L +
Sbjct: 445 FIDFYGKSGRSDKALETFEKMKIRGI-APNIVACNASLYSLAEMGRLREAKVIFNRLKSN 503
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S Y + + + + + ++ + IIV+N +I K+ ++++A
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F +K +K P ++TYN ++ LG+ G+V + FASM G P+ I++NT+L+
Sbjct: 564 WKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC 623
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K +DL L +M PD+LT+ +I + +++ LF+ MK + + P
Sbjct: 624 LCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPD 682
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEE 268
+L+ + K G ++ A I E+
Sbjct: 683 CVTLCTLLPGVVKNGLMEDAFKIAED 708
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
FAF K R+ L + +YN ++ +L + G + L + M G+
Sbjct: 180 FAFGKMREAGFHL-------------NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLK 226
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P +++ L+ K R + EM G+KP++ TYT I GR G I+E+ R+
Sbjct: 227 PSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRI 286
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M+ P + Y LID L GK+D AM +F +M +S
Sbjct: 287 MKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKAS 328
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ ++ +++ AL F+ +K D I YN+++D LGR R+ + L + M+ G
Sbjct: 971 LVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRG 1030
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD +YN+L+ NL ++ + E+ G++P++ TY ALI + +GN + +
Sbjct: 1031 INPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAY 1090
Query: 229 RLFNDMKQQQIRPSIYVYRSL 249
++ M P+ + L
Sbjct: 1091 AVYKRMMVGGCSPNTGTFAQL 1111
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 124/309 (40%), Gaps = 41/309 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL- 59
N I L K G V A+ L S+ N PN +N +L + +++DL+ ++L +
Sbjct: 583 NTLIAGLGKEGQVQRAMELFASMTG-NGCPPNTITFNTILDCLCKNDEVDLALKMLYKMT 641
Query: 60 -----------------LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES 102
LV + +S + ++T DC L + VV+ E
Sbjct: 642 TMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMED 701
Query: 103 I------------IVVNR-----IIFAFAKSRQIEKALLIFDH-IKGLKCKPDLITYNIV 144
+ V+R ++ EK +L D + G CK + I+
Sbjct: 702 AFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPII 761
Query: 145 LDILGRVGRVNDMLNEFASM-KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+L + + + F KE GV P SYN L+ + ++ F EM +G
Sbjct: 762 -KVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG 820
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
PD+ TY L+D+ G++G I E L+ M +P+ + +I NL K +D A+
Sbjct: 821 CAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKAL 880
Query: 264 TIFEEMNSS 272
+F ++ S
Sbjct: 881 DLFYDLVSG 889
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ L K+G + A L + + D NA YN ++ +T D++ + ++ K ++
Sbjct: 902 LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
YT+ L + E++ Q I N +I +S +IE+AL
Sbjct: 962 RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
++D ++ PDL TYN ++ LG G V + ++ G+ P+ +YN L+
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D ++ M G P+ T+ L
Sbjct: 1082 MSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
R++ +++F+ ++ K DL TY I+ L G + F M+EAG + S
Sbjct: 137 HRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYS 196
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN L++ L + L +R M G+KP L T++AL+ + G+ + E L +M+
Sbjct: 197 YNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEME 256
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
++P+IY Y I L + G++D A I + M D GP
Sbjct: 257 SLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRME---DDGCGP 297
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I +S +AL ++ + KP L T++ ++ G+ + + M+
Sbjct: 198 NGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMES 257
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ P+ +Y + L + R+D + M + G PD++TYT LID+ G +++
Sbjct: 258 LGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDD 317
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ LF MK +P Y +++D G + + EM +
Sbjct: 318 AMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEA 362
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 5/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CKA A+ LL +R K P+ YN ++ A D+D + IL DL
Sbjct: 204 LDATCKASGYRQAMVLLDEMRAKGCE-PDIVTYNVLINAMCNEGDVDEALNILSDLPSHG 262
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ YT ++ ++ ++ +F E +P+ + N I+ + + +++A
Sbjct: 263 CKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEV-TFNTIVTSLCQQGLVDRA 321
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + DH+ C PD++TY+ +LD L VGRV+D + + +K G PD I+Y T+L
Sbjct: 322 IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKG 381
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L I + + EM S PD +T+ +I S + G ++ ++++ M + P
Sbjct: 382 LCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPD 441
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y S+ID L +D AM + + S
Sbjct: 442 IVTYNSIIDGLCNERCIDDAMELLSNLQS 470
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 129/270 (47%), Gaps = 5/270 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN I++LC G V+ A R+ +L + YN ++ I+ + +++ +
Sbjct: 101 CNILIKRLCSGGRVADAERVFATLGASATVV--TYNTMVNGYCRAGRIEDARRLISGMPF 158
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T + + RA + L ++++ S++ + ++ A K+ +
Sbjct: 159 PPDTFT---FNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQ 215
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+++ D ++ C+PD++TYN++++ + G V++ LN + + G PD ++Y +L
Sbjct: 216 AMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L R F EM + PD +T+ ++ S + G ++ ++++ + M + P
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y S++D L +G+VD A+ + + S
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKS 365
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 10/274 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKD 58
M NGY C+AG + A RL+ + F P+ + N ++ A + + + D
Sbjct: 136 MVNGY----CRAGRIEDARRLISGMP----FPPDTFTFNPLIRALCVRGRVPDALAVFDD 187
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L + S Y+ A Q ++ ++E+ I+ N +I A
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGD 247
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++AL I + CKPD +TY VL L R ++ FA M PD +++NT
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ +L + +D + M E G PD++TY++++D G +++++ L + +K
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+P Y +++ L + + + A + EM S
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCS 401
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 121/276 (43%), Gaps = 3/276 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+ G V A++++ + + +P+ Y+ +L + +D + ++L L
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMSEHGC-IPDIVTYSSILDGLCDVGRVDDAVELLSRLK 364
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT + + + E+V P + N +I + + ++
Sbjct: 365 SYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVD 424
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + + C PD++TYN ++D L ++D + ++++ G PD +++NTLL
Sbjct: 425 RAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLL 484
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + R + M S PD T+ +I S + G + +++ M +
Sbjct: 485 KGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCI 544
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
P+ Y ++D L K GK A+ + M + DL
Sbjct: 545 PNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDL 580
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 11/275 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC+ G V A+++++ + + N P+ YN ++ ID + ++L +L
Sbjct: 411 NTVIASLCQKGLVDRAIKVVEQMSE-NGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ 469
Query: 61 VSSRTLSSDCYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + D D QL++ ++ P N +I + +
Sbjct: 470 SYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMV---NMMHSDCPPDATTFNTVITSLCQKG 526
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ +A+ + C P+ TYNIV+D L + G+ + L + M PD I+YN
Sbjct: 527 LLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYN 584
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T+++N+ K +++ L R M +G+ PD +TY +L R + ++R+ ++
Sbjct: 585 TVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDM 644
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P Y ++ + + D+A+ F M SS
Sbjct: 645 GLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSS 679
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P ++ N +I ++ A +F L ++TYN +++ R GR+ D
Sbjct: 95 PLPVVPCNILIKRLCSGGRVADAERVF---ATLGASATVVTYNTMVNGYCRAGRIEDARR 151
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M PD ++N L+ L R+ L F +M G P ++TY+ L+D+
Sbjct: 152 LISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATC 208
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +++ L ++M+ + P I Y LI+ + G VD A+ I ++ S
Sbjct: 209 KASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPS 260
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 28/272 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC + A+ LL +L+ P+ +N +L + + + Q++ +++
Sbjct: 446 NSIIDGLCNERCIDDAMELLSNLQSYGCK-PDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504
Query: 61 VSSRTLSSDCYTNFARAF--IMTDDCTQ-LLIFIEEVVQIASPESII----VVNRIIFAF 113
SDC + A F ++T C + LL+ E ++I + I N ++ A
Sbjct: 505 ------HSDCPPD-ATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDAL 557
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K+ + ++AL + + PDLITYN V+ + + G++ + L+ M G+ PD
Sbjct: 558 LKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDT 615
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
I+Y +L + + D + + + G+ PD Y ++ F + + ++ F
Sbjct: 616 ITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAH 675
Query: 234 MKQQQIRP--SIYV-------YRSLIDNLKKM 256
M P S Y+ Y L+D K++
Sbjct: 676 MVSSGCMPDESTYIILLEALAYECLLDEAKQL 707
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 130/272 (47%), Gaps = 8/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G + A+ LL+ + D N P+ Y ++ + ++++ K++
Sbjct: 298 NALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 356
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + CYT R + T Q + + ++ ++ +I +K+ +I
Sbjct: 357 SRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 416
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ IF ++ P+ + Y+ ++ L + +++ L A MK+A PD I+YN L+
Sbjct: 417 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 476
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ +F EM E+G KPD+ TY LI + GN + + + +DM +
Sbjct: 477 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR-- 534
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+VY SL+D L K GK++ +F EM S
Sbjct: 535 ---FVYSSLVDGLCKSGKLEGGCMLFHEMERS 563
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 120/268 (44%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+ LCK+G V AA+ +++R ++ ++ + + + + ++ + T
Sbjct: 197 LHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCT 256
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ YT + + +E++ +I N ++ K ++E+A+ +
Sbjct: 257 IDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDL 316
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
I C PD++TY ++D LG+ R + F M G+ D + Y L+ L +
Sbjct: 317 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 376
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
++ ++ M G PD++T + +ID + G I ++R+F M+ + + P+ V
Sbjct: 377 TGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 436
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
Y +LI L K K+D A+ + +M +
Sbjct: 437 YSALIHGLCKARKMDCALEMLAQMKKAF 464
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK-GLKCKPDLITYNIVLDILGRV 151
E+ I P+ + N +I + +R+ E+A + ++ P L T+N+VL L +
Sbjct: 145 ELATIFRPD-VETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKS 203
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G+V ++ F +++ + V +++ L+N L K + +E +G D+ TY
Sbjct: 204 GKVLAAMDHFEAVRRSMPV-SAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTY 262
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TA+++ + I+E++ L + P+I Y +L++ L KMG+++ A+ + ++
Sbjct: 263 TAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 6 IEKLCKAGNVSAAV----RLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I+ LCK+G+V AA +L++ +++ YN ++ + + D + +L D+
Sbjct: 476 IDGLCKSGDVEAARAFFDEMLEAGCKPDVY---TYNILISGLCKAGNTDAACGVLDDM-S 531
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIE-EVVQIASPESIIVVNRIIFAFAKSRQIE 120
SSR + S ++ + C ++F E E +A+ ++ R+IF K+ +++
Sbjct: 532 SSRFVYSSLVDGLCKSGKLEGGC---MLFHEMERSGVANSQT---RTRLIFHLCKANRVD 585
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F+ I+ + P YN ++ L + G+VN+ + M PD ++YN LL
Sbjct: 586 EAVSLFNAIRK-EGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALL 643
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
N + R+D Y+ EM G P + L D
Sbjct: 644 NGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLAD 679
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 115/287 (40%), Gaps = 43/287 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L KAG + AAVR+ +S+ + + PN Y+ ++ + +D + ++L + +
Sbjct: 406 IDGLSKAGRIGAAVRIFKSMEARGL-APNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 464
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + Y + D F +E+++ + N +I K+ + A
Sbjct: 465 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAAC 524
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV-------------- 169
+ D + + Y+ ++D L + G++ F M+ +GV
Sbjct: 525 GVLDDMSSSR-----FVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLC 579
Query: 170 -------------------VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+P +YN++++ L K +++ ++EM KPD +T
Sbjct: 580 KANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVT 638
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN-LKKM 256
Y AL++ ++ + + +M + P + + L D+ LK M
Sbjct: 639 YNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLADDRLKDM 685
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L G +L + + P+ Y+ ++ A + D + Q+L ++
Sbjct: 1188 NSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMK 1247
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT F +D L EE+ + +I K+ +I+
Sbjct: 1248 EIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRID 1307
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A F ++ C+PD + N +++ LG+ GR++D + F M+ +P ++YNT++
Sbjct: 1308 EAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTII 1367
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R +F M ESGI P TY+ LID F +T +E+++ L +M ++
Sbjct: 1368 KALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF 1427
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y SLID L K + DLA +F+E+ +
Sbjct: 1428 PPCPAAYCSLIDALGKAKRYDLACELFQELKEN 1460
Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 10/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAET----NDIDLSFQIL 56
N I L KAG + A++L Q + +P+ YN ++ A E+ +++ F+ +
Sbjct: 1329 NNMINFLGKAGRLDDAMKLFQEMETLRC-IPSVVTYNTIIKALFESKSRASEVPSWFERM 1387
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K+ +S SS Y+ F T+ + ++ +EE+ + P +I A K+
Sbjct: 1388 KESGISP---SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 1444
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ + A +F +K Y +++ LG+ GR++D +N F M + G PD +Y
Sbjct: 1445 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 1504
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ L + LD L R M E G PD+ +Y +++ +TG ++ + ++MKQ
Sbjct: 1505 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 1564
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+RP + Y +++ L G + A + +EMN+
Sbjct: 1565 STVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNT 1599
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 91 IEEVVQ----IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
I+E+V+ + +P + V R++ ++ + +A+ IF IK KC+P YN ++
Sbjct: 1136 IQEMVRNPICVVTPTELSDVVRML---GNAKMVRQAITIFYQIKTRKCQPIAQAYNSMII 1192
Query: 147 IL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+L G+ +V+ + NE ++ E PD ++Y+ L++ K+ R D + EM E G
Sbjct: 1193 MLMHEGQYEKVHQLYNEMST--EGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIG 1250
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
++P YT LI F + + +L LF +M+ Q RP ++ Y LI L K G++D A
Sbjct: 1251 MQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAY 1310
Query: 264 TIFEEM 269
F EM
Sbjct: 1311 HFFCEM 1316
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 39/256 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK + A+ LL+ + +K P AY ++ A + DL+ ++ ++L
Sbjct: 1403 IDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL----- 1457
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+C ++ AR + + +I K+ +++ A+
Sbjct: 1458 --KENCGSSSARVYAV----------------------------MIKHLGKAGRLDDAIN 1487
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD + L C PD+ YN ++ L R G +++ L+ M+E G +PD SYN +LN L
Sbjct: 1488 MFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLA 1547
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + M +S ++PD+++Y ++ + G EE+ +L +M +
Sbjct: 1548 KTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLI 1607
Query: 245 VYRSLIDNLKKMGKVD 260
Y S+ L+ +GKVD
Sbjct: 1608 TYSSI---LEAIGKVD 1620
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 18/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLL-----QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL- 59
I L KAG + A + R +F+ N N L + +D FQ ++ L
Sbjct: 1297 IRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMIN-FLGKAGRLDDAMKLFQEMETLR 1355
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+V+ T+ + + +RA +++ + E + + S + +I F K
Sbjct: 1356 CIPSVVTYNTIIKALFESKSRA-------SEVPSWFERMKESGISPSSFTYSILIDGFCK 1408
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ ++EKA+++ + + P Y ++D LG+ R + F +KE
Sbjct: 1409 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 1468
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y ++ +L K RLD + F EM + G PD+ Y AL+ RTG ++E+L M+
Sbjct: 1469 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 1528
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y +++ L K G AM + M S
Sbjct: 1529 EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 1565
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 117/219 (53%), Gaps = 2/219 (0%)
Query: 51 LSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
+++ L D L + C +A+ +D+ F E +P +++ +I
Sbjct: 561 ITYSALVDGLCKAGESQKACEV-YAKMIGTSDNVGSDFYFEGEHTDSIAP-NVVTYGALI 618
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K+ ++ A + D + C+P+ I Y+ ++D +VG++++ F M + G +
Sbjct: 619 DGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYL 678
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P +Y +L++ + K RRLDL + +M ES P+++TYTA+ID R G +++L+L
Sbjct: 679 PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKL 738
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M+++ P++ Y SLID L K GKVD+++ +F +M
Sbjct: 739 LSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQM 777
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 111/238 (46%), Gaps = 16/238 (6%)
Query: 51 LSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
L+ ++ +++L SS L+ NFAR + I+ +++ +++I
Sbjct: 403 LAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVI 462
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++ ++EKA L+F +K + PD+ TY I++D +VG + + F M+ G
Sbjct: 463 TFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCS 522
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P ++Y LL+ K +++ F M ++G P+ +TY+AL+D + G +++ +
Sbjct: 523 PSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEV 582
Query: 231 FNDM----------------KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ M I P++ Y +LID L K KV A + + M+S+
Sbjct: 583 YAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSN 640
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 16/237 (6%)
Query: 50 DLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRI 109
D +FQI+K ++ + Y+ + + +E+ + + +
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
I +F K IE+A FD ++ + C P ++TY +L + +V + F M +AG
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556
Query: 170 VPDFISYNTLLNNLRKI-RRLDLCLIYFREMGES---------------GIKPDLLTYTA 213
P+ I+Y+ L++ L K C +Y + +G S I P+++TY A
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGA 616
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
LID + + ++ L + M P+ +Y +LID K+GK+D A +F M+
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMS 673
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ +I A K R+++ A+ + + C P+++TY ++D L R+G L
Sbjct: 680 TVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLL 739
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M++ G P+ ++Y +L++ L K ++D+ L F +M G P+ +TY LI+
Sbjct: 740 SMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAA 799
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G ++E+ L ++MKQ + Y S++ K K ++ + EE+ S
Sbjct: 800 GLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELES 847
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 121/273 (44%), Gaps = 5/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKA V A LL + N PN Y+ ++ + +D + ++ +
Sbjct: 618 IDGLCKAHKVVDAQELLDVM-SSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT+ A + + ++++ + +++ +I + + +KAL
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ C P+++TY ++D LG+ G+V+ L F M G P++++Y L+N+
Sbjct: 737 KLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHC 796
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
LD EM ++ + Y +++ F + SL L +++ +
Sbjct: 797 CAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIA 854
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
VY LID+ K G+++ A+ + +EM S L
Sbjct: 855 PVYGLLIDSFSKAGRLEKALELHKEMMEVSSSL 887
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 6/171 (3%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL--GRVGRVNDML----NE 160
N ++ ++ +R A + + + G C P + YNI + + G D+L
Sbjct: 348 NSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKV 407
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ M + V + ++ L + + D + M G PD TY+ +I
Sbjct: 408 YEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCE 467
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+E++ LF +MK + P +Y Y LID+ K+G ++ A + F+EM S
Sbjct: 468 AMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMES 518
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 91/252 (36%), Gaps = 7/252 (2%)
Query: 18 AVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARA 77
A R L+ RD FL +A ++ S T ++ + F + + V + + CY A
Sbjct: 91 AERFLRRHRD---FLNDAVVVAVLRSVRTPELCVRFFLWAERQVG-YSHTGACYNALAEV 146
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
D + E+ + ++N I+ + KAL +K +P
Sbjct: 147 LHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPS 206
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
TYN ++ +L G+++ M E G D + L K R L+
Sbjct: 207 GATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIE 266
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
K D + T +I +E++ + M+ P++ YR+L+ K
Sbjct: 267 ---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKK 323
Query: 258 KVDLAMTIFEEM 269
++ I M
Sbjct: 324 QLGWCKRIISMM 335
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-------AETNDI--------- 49
I+ CKAG + A L + +R L+ + + NDI
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389
Query: 50 ---DLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
D+++ L D L + +S + +A+ +D F E +P +++
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKA-FEVYAKLIGTSDSADSDFYFPCEDRHTLAP-NVVTY 447
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
++ K+ +++ A + D + C+P+ I Y+ ++D + G+++ F M +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +P +Y +L++ + K RLDL + +M + P+++TYTA+ID R G E+
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L+L + M+++ P++ Y +LID L K GK+DL++ +F +M+
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 19/279 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC G A +L++ + K F+P+ Y+ V+ ++ +F + +++ + T
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKG-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
YT +F Q EE+ + +++ +I A+ K++Q+ +A IF
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM----------------KEAGVV 170
+ C+P+ +TY ++D L + G ++ +A + +
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 441
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ ++Y L++ L K ++D M SG +P+ + Y ALID F + G I+ + +
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M + PS++ Y SLID + K G++DLAM + +M
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+DL+ +I ++L ++ L+ NFAR + I+E+++ ++
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + ++EKA L+F +K + PD+ TY I++D + G + F M+ G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P ++Y L++ K +++ F M ++G +P+ +TY AL+D + GNI ++
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413
Query: 229 RLFNDM----------------KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ + + + P++ Y +L+D L K KVD A + + M SS
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 52/284 (18%)
Query: 6 IEKLCKAGNVSAAVRLLQSL---------------RDKNIFLPN--AYNCVLVASAETND 48
++ LCKAGN+S A + L D++ PN Y ++ + +
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+D + ++L +L SS C N IV +
Sbjct: 460 VDHAHELLDAML------SSGCEPNH-----------------------------IVYDA 484
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K+ +I+ A +F + P + TY ++D + + GR++ + + M +
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 544
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ ++Y +++ L +I + L M E G P+++TYTALID G+ G I+ SL
Sbjct: 545 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 604
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF M ++ P+ YR LI++L G +D A + EM +
Sbjct: 605 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 41/204 (20%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI---------------VLDI---- 147
N ++ ++ + A + + + C P + YNI +LD+
Sbjct: 181 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 240
Query: 148 ----------------------LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
L VG+ + M G VPD +Y+ ++ L
Sbjct: 241 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 300
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+++ + F+EM G+ PD+ TYT LIDSF + G IE++ LF +M+ P++
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI K +V A IF M
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRM 384
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 38/297 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CKAG + +A + + K +LP + Y ++ + +DL+ ++L +L S
Sbjct: 486 IDGFCKAGKIDSAQEVFLQMT-KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 544
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + YT + + L + + + +++ +I K+ +I+ +L
Sbjct: 545 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 604
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE-------------------- 160
+F + C P+ +TY ++++ L G ++ +L E
Sbjct: 605 DLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664
Query: 161 ----------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE--SGIKPDL 208
M+ G VP Y L++ K RL++ + +EM E S +K D
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 724
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
Y +LI + +EE+ RL+++M ++ P + V+ LI L ++ K D A+ +
Sbjct: 725 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ +P+ ++Y TLL+ K ++L C M G P+ + +L+ S+ +
Sbjct: 133 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 192
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK------VDLAMTIFEEM 269
+ +L N M P VY I ++ K +DLA I+ EM
Sbjct: 193 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 244
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 5/144 (3%)
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL-RK 185
D +K +P +TYN ++ +L G+V+ M E+G D + + L ++
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
R D + RE K D + T +I +E++ + M+ P++
Sbjct: 89 GRWADALDMIERE----DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
YR+L+ K ++ I M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMM 168
>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
Length = 484
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G + AV L L ++ P+ Y+ ++ + ++ + ++ +L
Sbjct: 152 NTVINGLCKFGKIDWAVHLFTRL-PHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMML 210
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR-QI 119
++ + Y A F + L ++ ++Q S++ N II + + +I
Sbjct: 211 EANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRI 270
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A +F + G C P+ +TY ++ L ++ V L F M +AG+ PD +Y++L
Sbjct: 271 EEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSL 330
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF--GRTGNIEESLRLFNDMKQQ 237
+ K+R+LD ++ + + PD+ YT LI + R ++E+L LF +MK +
Sbjct: 331 IYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDR 390
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ P++ Y ++ L K G+ D A IF+EM
Sbjct: 391 RVWPNVITYNIVLRGLCKTGRFDEAYQIFQEM 422
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + N ++ + ++ +AL+ F + G CKP++ TYN V++ L + G+++ ++
Sbjct: 111 PPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLCKFGKIDWAVH 169
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F + V PD +Y+TL++ L + RL+ + + M E+ D Y A+ D F
Sbjct: 170 LFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFC 229
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
+ ++E+L + M Q++ +PS+ Y +I+ + + +++ A +F++M S
Sbjct: 230 KERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGS 283
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
CYT + + + F + + S+ II F R +A ++
Sbjct: 46 CYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYM 105
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
+ L PD+ YN+VL +GRV L +F M + P+ +YNT++N L K ++
Sbjct: 106 RSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTVINGLCKFGKI 164
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
D + F + + PD TY+ L+ + +E ++++++ M + Y ++
Sbjct: 165 DWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAM 224
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
D K +VD A+ + + M
Sbjct: 225 ADGFCKERRVDEALEVLKTM 244
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 103/237 (43%), Gaps = 6/237 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAE-TNDIDLSFQILKDL 59
N + CK V A+ +L+++ + P+ YNC++ + N I+ ++++ + +
Sbjct: 222 NAMADGFCKERRVDEALEVLKTMIQRRC-KPSVVTYNCIINGVCQYKNRIEEAYRLFQQM 280
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ S ++ Y + + L + + + + +I+AF K R++
Sbjct: 281 VGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKL 340
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLD--ILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++A I PD+ Y ++ R RV++ L F +MK+ V P+ I+YN
Sbjct: 341 DEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYN 400
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+L L K R D F+EM + P+ +T+ + ++ R+F DM
Sbjct: 401 IVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDM 457
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 1/144 (0%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ Y +L L R R + + F A P S+ ++ +R
Sbjct: 41 RHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWR 100
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
Y M GI PD+ Y ++ + G + +L F M + +P++ Y ++I+ L
Sbjct: 101 YLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTVINGLC 159
Query: 255 KMGKVDLAMTIFEEMNSSLSDLAG 278
K GK+D A+ +F + L D G
Sbjct: 160 KFGKIDWAVHLFTRLPHDLVDPDG 183
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
S K+ G D Y LL++L + RR + +F+ + +P L ++T +I F
Sbjct: 34 SSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVR 93
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
N + R M+ I P + Y ++ +G+V A+ F +M +
Sbjct: 94 NPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT 143
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 95/172 (55%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ + N ++ A K Q++ A I + + P++++Y+ V+D + GR ++ LN
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M+ + D +SYNTLL+ K+ R + L REM GIK D++TY AL+ +G+
Sbjct: 432 FGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G +E ++F +MK++ + P++ Y +LID K G AM +F E S+
Sbjct: 492 QGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSA 543
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 92/167 (55%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ + +I FAK+ + ++AL +F ++ L D ++YN +L I +VGR + L+
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G+ D ++YN LL K + D F EM + P+LLTY+ LID + + G
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++ +F + K +R + +Y +LID L K G V A+++ +EM
Sbjct: 529 LYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 127/257 (49%), Gaps = 8/257 (3%)
Query: 9 LCKAGNVSAAVRLL---QSLR--DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSS 63
+C G + A R L S R ++++F +YN +L A + +DL+F+IL +
Sbjct: 348 VCSRGGLWEAARNLFDEMSNRRIEQDVF---SYNTLLDAICKGGQMDLAFEILAQMPAKR 404
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ F + L E+ + + N ++ + K + E+AL
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + K D++TYN +L G+ G+ +++ FA MK V+P+ ++Y+TL++
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGY 524
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + FRE +G++ D++ Y+ALID+ + G + ++ L ++M ++ I P++
Sbjct: 525 SKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 244 YVYRSLIDNLKKMGKVD 260
Y S+ID + ++
Sbjct: 585 VTYNSIIDAFGRSATME 601
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNE 160
++ + +I A+ +S E+A+ +F+ +K +P+L+TYN V+D G+ G +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M+ V PD I++N+LL + + F EM I+ D+ +Y L+D+ +
Sbjct: 327 FDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICK 386
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++ + + M ++I P++ Y ++ID K G+ D A+ +F EM
Sbjct: 387 GGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G + A +L + K I +PN +Y+ V+ A+ D + + ++
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPAKRI-MPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L Y + + L + E+ + + ++ N ++ + K + +
Sbjct: 437 YLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F +K P+L+TY+ ++D + G + + F K AG+ D + Y+ L+
Sbjct: 497 EVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALI 556
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ L K + + EM + GI P+++TY ++ID+FGR+ +E S
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERS 603
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 103 IIVVNRIIFAFAKSR-QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ N +I A K + ++ FD ++ +PD IT+N +L + R G N F
Sbjct: 303 LVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLF 362
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + D SYNTLL+ + K ++DL +M I P++++Y+ +ID F +
Sbjct: 363 DEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKA 422
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G +E+L LF +M+ I Y +L+ K+G+ + A+ I EM S
Sbjct: 423 GRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++ LGR G+V F + G +++ L++ + + + F M E G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 204 IKPDLLTYTALIDSFGRTG-NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
++P+L+TY A+ID+ G+ G ++ + F++M++ ++P + SL+ + G + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 263 MTIFEEMN 270
+F+EM+
Sbjct: 359 RNLFDEMS 366
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLN--EFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
C D TY ++ LG G + + EFA +E + +++ L + ++ +
Sbjct: 194 CGSDDCTY--IIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTI 251
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
F G + ++ALI ++GR+G EE++ +FN MK+ +RP++ Y ++ID
Sbjct: 252 AKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 252 NLKKMG-KVDLAMTIFEEM 269
K G + F+EM
Sbjct: 312 ACGKGGMEFKQVAKFFDEM 330
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV-------- 154
+++ + +I A K+ + A+ + D + P+++TYN ++D GR +
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSN 608
Query: 155 -------NDMLNEFASMKEAGVVPDFISYNTLLNNL------RKIRRLDLCLIYFREMGE 201
+ L+E + V+ F + NN ++ L L FR+M +
Sbjct: 609 GGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQ 668
Query: 202 SGIKPDLLTYTALIDSFGRTGNIE------ESLRLFND 233
IKP+++T++A++++ R + E E LRLF++
Sbjct: 669 LEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 706
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 122/241 (50%), Gaps = 4/241 (1%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+A YN ++ A + I+ D+L ++ S Y N A + + + L
Sbjct: 195 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 254
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++ + ++ N ++ A+ + Q K L F+ +KG +PD T NIV+ L +
Sbjct: 255 CKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVK 314
Query: 151 VGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+G+ ++ F SMKE + PD +++ T+++ +++ C F M G+KP++
Sbjct: 315 LGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++Y ALI ++ G +E+ +FN++K+ P + Y SL++ K GK + AM +FE
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 269 M 269
M
Sbjct: 435 M 435
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 89 IFIEEVVQIASPESIIVV-----------------NRIIFAFAKSRQIEKALLIFDHIKG 131
+ I E+ QI S E + V N +I A+ +++A +F ++
Sbjct: 131 LLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQK 190
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
+CKPD TYN +++ GR G+ +N M A + P +YN L+N
Sbjct: 191 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 250
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
L ++M E+G+ PDL+T+ ++ ++ R + L F MK IRP +I
Sbjct: 251 ALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIY 310
Query: 252 NLKKMGKVDLAMTIFEEMNSSLSD 275
L K+G+ A+ IF M S+
Sbjct: 311 CLVKLGQNGKAIDIFNSMKEKRSE 334
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 123/268 (45%), Gaps = 4/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
I ++ + G++ +V++ + ++++ + + YN ++ A N +D + + ++
Sbjct: 133 IREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWR 192
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y A + ++++++ A P S N +I A S ++AL
Sbjct: 193 CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 252
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PDL+T+NIVL R + + +L+ F MK + PD + N ++ L
Sbjct: 253 NVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCL 312
Query: 184 RKIRRLDLCLIYFREMGE--SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ + + F M E S PD++T+T +I + G IE FN M + ++P
Sbjct: 313 VKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKP 372
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I Y +LI G A ++F E+
Sbjct: 373 NIVSYNALIGAYASHGMDKEAFSVFNEI 400
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ II ++ QIE F+ + KP++++YN ++ G + + F
Sbjct: 339 VVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFN 398
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K+ G PD +SY +LLN K + + + F M + KP+L++Y ALID++G G
Sbjct: 399 EIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKG 458
Query: 223 NIEESLRLFNDMKQQQIRPSI 243
+ E++ + ++M++ ++P+I
Sbjct: 459 LLTEAVEILHEMERNGVQPNI 479
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ ++ A+ KS + EKA+ +F+ ++ CKP+L++YN ++D G G + + +
Sbjct: 409 VVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILH 468
Query: 163 SMKEAGVVPDFIS-----------------------------------YNTLLNNLRKIR 187
M+ GV P+ +S YN+ + + +
Sbjct: 469 EMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVG 528
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
D L +R M +KPD +TY LI + E+L ++M +I S VY
Sbjct: 529 EYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYS 588
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
S+I K G+V A ++F +M
Sbjct: 589 SVICAYSKQGQVTEAESMFTKM 610
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 8/221 (3%)
Query: 58 DLLVSSRTLSSDCYTN---FARAFIMTDDCTQL----LIFIEEVVQIASPESIIVVNRII 110
D+ S + S+CY + F + C Q+ F + + P +I+ N +I
Sbjct: 323 DIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKP-NIVSYNALI 381
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
A+A ++A +F+ IK PD+++Y +L+ G+ G+ + F M+
Sbjct: 382 GAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCK 441
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ +SYN L++ L + EM +G++P++++ L+ + GR G + +
Sbjct: 442 PNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV 501
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + + I+ + Y S I + +G+ D A++++ M +
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRT 542
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 27/273 (9%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL--------L 60
K+G A+++ + +R +N PN +YN ++ A + + +IL ++ +
Sbjct: 421 KSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNI 479
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKS 116
VS TL + C C Q + I+ V+ A I N I ++
Sbjct: 480 VSICTLLAAC-----------GRCGQK-VKIKSVLSAAELRGIKLNTTAYNSAIGSYLSV 527
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +KAL ++ ++ K KPD +TYN+++ ++ + + L M + + Y
Sbjct: 528 GEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVY 587
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++++ K ++ F +M G +PD++TYTA+I ++ N E++ LF +M+
Sbjct: 588 SSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMET 647
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P SL+ K G+ + + E M
Sbjct: 648 DDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFM 680
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K++L ++G+K + YN + VG + L+ + +M+ V PD ++YN L+
Sbjct: 499 KSVLSAAELRGIKL--NTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLI 556
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K+ + L + EM + I Y+++I ++ + G + E+ +F MK R
Sbjct: 557 SGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCR 616
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y ++I + A +F EM +
Sbjct: 617 PDVITYTAMIHAYDVAENWEKASALFLEMET 647
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 124/319 (38%), Gaps = 40/319 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I G A+ L +++R K + P YN ++ + + + L +++
Sbjct: 518 NSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMD 577
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
LS + Y++ A+ T+ ++ + +I +I A+ + EK
Sbjct: 578 LKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEK 637
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY----- 176
A +F ++ +PD I + ++ + G+ +L M+E + + S+
Sbjct: 638 ASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVS 697
Query: 177 ------------------------------NTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
N LL+ L K +++ + F ++ SG +
Sbjct: 698 ACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEI 757
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ TY+ L+ + GN + + + M++ ++PS+ +YRS+ + + A I
Sbjct: 758 NFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQ 817
Query: 267 EEM----NSSLSDLAGPKD 281
E + NSS L P++
Sbjct: 818 ERIGMPDNSSSQALLIPEE 836
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ ++ +I + +++++A + + C+PD +TYN+ +D L + RV+D
Sbjct: 38 SPD-MVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 96
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M E +P ++Y L++ L K RLD + +M E G P L TYT +ID
Sbjct: 97 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGL 156
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G +EE+ R+F DM RP +VY +LI L K+GK+D A+ +M
Sbjct: 157 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQM 207
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 8/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G V +R++ + P+A Y ++ + I + ++ + +L S
Sbjct: 331 IDGLCKLGRVEEGCERFHEMRNRG-YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 389
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+S+ Y + + + +++ + ++ F + A+
Sbjct: 390 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 449
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + C+P+L++YNI++ L R G++ F + + + PD ++N+ L+ L
Sbjct: 450 ELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGL 509
Query: 184 RKIRRLDLC---LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+RLD + F M G P+L +Y+ L+D R G +E +L +F++M + +
Sbjct: 510 --CQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVA 567
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P + V+ +LI L G+VD A+ +F E+
Sbjct: 568 PDVVVFNTLIRWLCIAGRVDEALEVFRELE 597
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ A K+ + E+A+ + +C P L TY ++D ++GR+++ L + E
Sbjct: 258 NPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVE 317
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +PD ++Y ++++ L K+ R++ F EM G +PD +TY ALID F + I +
Sbjct: 318 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPK 377
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ R++ M Q S Y ++D L K G+V A F M
Sbjct: 378 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 421
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 10/274 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK-NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ L KAG + A+ +L+ + +K N Y V+ ++ ++ + +I D+L +
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 177
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKSRQIE 120
+ YT + L+++ ++V+ + ++ N +I S +E
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLE 237
Query: 121 KALLIFDHIKGLKCKPDL--ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
AL FD + DL T+N ++ L + R + + M E P +Y +
Sbjct: 238 DALAYFDELDD---SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTS 294
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K+ RLD L+ +E E G PD +TYT++ID + G +EE F++M+ +
Sbjct: 295 LVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 354
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y +LID K + A ++ +M S
Sbjct: 355 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQS 388
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 139/317 (43%), Gaps = 62/317 (19%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+C + LCK G + A+ LL D+ P+ A+ V+ +D +F +L+
Sbjct: 11 VCTALLNGLCKTGQLDRAMLLL----DEMPCSPDMVAFTVVINGLCREKRLDEAFSVLE- 65
Query: 59 LLVSSRTLSSDCYTNFA--RAFI-------MTDDCTQLLIFIEEVVQIASPESIIVVNRI 109
R + + C ++ FI DD QLL ++E + + + +
Sbjct: 66 -----RAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPT---TVTYTAL 117
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
+ K+ ++++A+ I + + P L TY +V+D L + GRV + F M G
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 177
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGES----GIKPDLLTYTALIDSFGRTGNIE 225
PD Y L++ L KI +LD L+Y +M E+ G++PD++ + +I +GN+E
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLE 237
Query: 226 ESLRLFND----------------------------------MKQQQIRPSIYVYRSLID 251
++L F++ M +++ P+++ Y SL+D
Sbjct: 238 DALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297
Query: 252 NLKKMGKVDLAMTIFEE 268
K+G++D A+ +E
Sbjct: 298 GFLKLGRLDEALLQLKE 314
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 116/267 (43%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I +LC +GN+ A+ L D +N ++ A + + + +K +
Sbjct: 224 NLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSER 283
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ YT+ F+ + L+ ++E V+ + II K ++E+
Sbjct: 284 RCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 343
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
F ++ +PD +TY ++D + + + M ++G V ++YN +L+
Sbjct: 344 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 403
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K R+ F M E G ++TY+AL+D F GN+ ++ LF M + P+
Sbjct: 404 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 463
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +I L + GK+ A FE++
Sbjct: 464 LVSYNIIIRGLCRAGKLAKAYFYFEKL 490
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 118/273 (43%), Gaps = 4/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA A+ ++ + ++ F P Y ++ + +D + LK+ +
Sbjct: 258 NPLVAALCKAERTEEAIAFVKKMSERRCF-PTLFTYTSLVDGFLKLGRLDEALLQLKEAV 316
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT+ + E+ + +I F K++ I
Sbjct: 317 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIP 376
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA ++ + +TYNI+LD L + GRV + F +M+E G V ++Y+ L+
Sbjct: 377 KAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALM 436
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + FR M + G +P+L++Y +I R G + ++ F + Q+++
Sbjct: 437 DGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC 496
Query: 241 PSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
P +Y + S + L +++ V + +FE M S
Sbjct: 497 PDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQ 529
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+++Q + S + N I+ K+ ++ +A F ++ C ++TY+ ++D G
Sbjct: 384 QMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEG 443
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V+ + F M + G P+ +SYN ++ L + +L YF ++ + + PD+ T+
Sbjct: 444 NVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFN 503
Query: 213 ALIDSF-GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + R + + + LF M Q P+++ Y L+D + + G +++ + IF EM S
Sbjct: 504 SFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVS 563
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 3/241 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKN-IFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LCKAG V+ A ++ ++ + Y+ ++ ++ + ++ + +L
Sbjct: 401 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 460
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS-RQIEKAL 123
+ Y R + + E+++Q + N + + + +
Sbjct: 461 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGV 520
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + P+L +Y+I++D + R G + L F M GV PD + +NTL+ L
Sbjct: 521 ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWL 580
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R+D L FRE+ E PD +Y +L+D+ R +EE+ L MK Q P
Sbjct: 581 CIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPRH 639
Query: 244 Y 244
Y
Sbjct: 640 Y 640
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 122/241 (50%), Gaps = 4/241 (1%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+A YN ++ A + I+ D+L ++ S Y N A + + + L
Sbjct: 195 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 254
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++ + ++ N ++ A+ + Q K L F+ +KG +PD T NIV+ L +
Sbjct: 255 CKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVK 314
Query: 151 VGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+G+ ++ F SMKE + PD +++ T+++ +++ C F M G+KP++
Sbjct: 315 LGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++Y ALI ++ G +E+ +FN++K+ P + Y SL++ K GK + AM +FE
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 269 M 269
M
Sbjct: 435 M 435
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 89 IFIEEVVQIASPESIIVV-----------------NRIIFAFAKSRQIEKALLIFDHIKG 131
+ I E+ QI S E + V N +I A+ +++A +F ++
Sbjct: 131 LLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQK 190
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
+CKPD TYN +++ GR G+ +N M A + P +YN L+N
Sbjct: 191 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 250
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
L ++M E+G+ PDL+T+ ++ ++ R + L F MK IRP +I
Sbjct: 251 ALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIY 310
Query: 252 NLKKMGKVDLAMTIFEEMNSSLSD 275
L K+G+ A+ IF M S+
Sbjct: 311 CLVKLGQNGKAIDIFNSMKEKRSE 334
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 123/268 (45%), Gaps = 4/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
I ++ + G++ +V++ + ++++ + + YN ++ A N +D + + ++
Sbjct: 133 IREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWR 192
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y A + ++++++ A P S N +I A S ++AL
Sbjct: 193 CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 252
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PDL+T+NIVL R + + +L+ F MK + PD + N ++ L
Sbjct: 253 NVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCL 312
Query: 184 RKIRRLDLCLIYFREMGE--SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ + + F M E S PD++T+T +I + G IE FN M + ++P
Sbjct: 313 VKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKP 372
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I Y +LI G A ++F E+
Sbjct: 373 NIVSYNALIGAYASHGMDKEAFSVFNEI 400
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ II ++ QIE F+ + KP++++YN ++ G + + F
Sbjct: 339 VVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFN 398
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K+ G PD +SY +LLN K + + + F M + KP+L++Y ALID++G G
Sbjct: 399 EIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKG 458
Query: 223 NIEESLRLFNDMKQQQIRPSI 243
+ E++ + ++M++ ++P+I
Sbjct: 459 LLTEAVEILHEMERNGVQPNI 479
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ ++ A+ KS + EKA+ +F+ ++ CKP+L++YN ++D G G + + +
Sbjct: 409 VVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILH 468
Query: 163 SMKEAGVVPDFIS-----------------------------------YNTLLNNLRKIR 187
M+ GV P+ +S YN+ + + +
Sbjct: 469 EMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVG 528
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
D L +R M +KPD +TY LI + E+L ++M +I S VY
Sbjct: 529 EYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYS 588
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
S+I K G+V A ++F +M
Sbjct: 589 SVICAYSKQGQVTEAESMFTKM 610
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 8/221 (3%)
Query: 58 DLLVSSRTLSSDCYTN---FARAFIMTDDCTQL----LIFIEEVVQIASPESIIVVNRII 110
D+ S + S+CY + F + C Q+ F + + P +I+ N +I
Sbjct: 323 DIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKP-NIVSYNALI 381
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
A+A ++A +F+ IK PD+++Y +L+ G+ G+ + F M+
Sbjct: 382 GAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCK 441
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ +SYN L++ L + EM +G++P++++ L+ + GR G + +
Sbjct: 442 PNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSV 501
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + + I+ + Y S I + +G+ D A++++ M +
Sbjct: 502 LSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRT 542
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 27/273 (9%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL--------L 60
K+G A+++ + +R +N PN +YN ++ A + + +IL ++ +
Sbjct: 421 KSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNI 479
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKS 116
VS TL + C C Q + I+ V+ A I N I ++
Sbjct: 480 VSICTLLAAC-----------GRCGQK-VKIKSVLSAAELRGIKLNTTAYNSAIGSYLSV 527
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +KAL ++ ++ K KPD +TYN+++ ++ + + L M + + Y
Sbjct: 528 GEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVY 587
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++++ K ++ F +M G +PD++TYTA+I ++ N E++ LF +M+
Sbjct: 588 SSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMET 647
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P SL+ K G+ + + E M
Sbjct: 648 DDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFM 680
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K++L ++G+K + YN + VG + L+ + +M+ V PD ++YN L+
Sbjct: 499 KSVLSAAELRGIKL--NTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLI 556
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K+ + L + EM + I Y+++I ++ + G + E+ +F MK R
Sbjct: 557 SGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCR 616
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y ++I + A +F EM +
Sbjct: 617 PDVITYTAMIHAYDVAENWEKASALFLEMET 647
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/305 (17%), Positives = 118/305 (38%), Gaps = 36/305 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I G A+ L +++R K + P YN ++ + + + L +++
Sbjct: 518 NSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMD 577
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
LS + Y++ A+ T+ ++ + +I +I A+ + EK
Sbjct: 578 LKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEK 637
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY----- 176
A +F ++ +PD I + ++ + G+ +L M+E + + S+
Sbjct: 638 ASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVS 697
Query: 177 ------------------------------NTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
N LL+ L K +++ + F ++ SG +
Sbjct: 698 ACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEI 757
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ TY+ L+ + GN + + + M++ ++PS+ +YRS+ + + A I
Sbjct: 758 NFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQ 817
Query: 267 EEMNS 271
E + S
Sbjct: 818 ERIES 822
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
+++LCKA + A ++ +S + C L+ + +D ++++ + +L +
Sbjct: 296 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 355
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT+ R F + +E+++ + ++N + K+ ++EK +
Sbjct: 356 NANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 415
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF+ I+ PD+ +Y+I++ L + G+ + N F +MK+ G D +YN +++
Sbjct: 416 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 475
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++ EM E ++P + TY A++D + ++E+ LF + K + I ++
Sbjct: 476 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 535
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLID K+G++D A I EEM
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEM 560
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 130/272 (47%), Gaps = 3/272 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + +++ + L AYN V+ ++ + +++IL+++
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 495
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y D + + EE ++++ + +I F K +I++A L
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 555
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N +LD L + +N+ L F SMKE P+ +Y+ L+N L
Sbjct: 556 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 615
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++++ + +++++M + G+ P+++TYT +I + GNI ++ LF K P
Sbjct: 616 RVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 675
Query: 245 VYRSLIDNLKKMGKVDLA--MTIFEEMNSSLS 274
+ +LI+ + + A T+++ +SS S
Sbjct: 676 SFNALIEGMSNANRAMEAYQTTVYQLSSSSCS 707
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 5/279 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ + KAG V + + +R FLP+ +Y+ ++ + + I +
Sbjct: 398 NTYMDCVFKAGEVEKGRMIFEDIRSYG-FLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + Y F + + +EE+ + ++ I+ AK +++
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 516
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++F+ K + +++ Y+ ++D G+VGR+++ M + G+ P+ ++N+LL
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ L+ F+ M E P+ TY+ LI+ R ++ + DM++Q +
Sbjct: 577 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 636
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE--EMNSSLSDLA 277
P++ Y ++I L K+G + A ++FE + N + D A
Sbjct: 637 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 675
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 123/266 (46%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ KAGNV A + L+ + + P+ +Y ++ + + + ++ +
Sbjct: 122 IDCFGKAGNVDMACKFFHELKAQGL-KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 180
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + +E + + S++ N I+ K R++++AL
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K +P+ TYNI++D+L GRV + M+ A + P+ ++ N +++ L
Sbjct: 241 SLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 299
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+L+ F + G PD +TY +LID G+ G ++E+ RLF M +
Sbjct: 300 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 359
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLI N G+ + +F+E+
Sbjct: 360 VVYTSLIRNFFIHGRKEDGHKVFKEL 385
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 92/182 (50%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + ++ ++ + + ++ A A+ Q+ AL + D +KG +PD++ YN+ +D
Sbjct: 65 LELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDC 124
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
G+ G V+ F +K G+ PD +SY +++ L K RL F +M P
Sbjct: 125 FGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 184
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
Y +I +G G E++ +L ++++ PS+ + S++ L K KVD A+++FE
Sbjct: 185 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE 244
Query: 268 EM 269
M
Sbjct: 245 VM 246
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 3/255 (1%)
Query: 18 AVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARA 77
AV +++ L+ + F +AY ++ A AE + + ++L+ + + +T RA
Sbjct: 32 AVAVMRRLKFRPAF--SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRA 89
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
L ++EV I++ N I F K+ ++ A F +K KPD
Sbjct: 90 LAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPD 149
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
++Y ++ +L + GR+ + FA M+ VP +YNT++ R +
Sbjct: 150 DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 209
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+ E G P ++++ +++ G+ ++E+L LF MK+ P+ Y +ID L G
Sbjct: 210 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGG 268
Query: 258 KVDLAMTIFEEMNSS 272
+V+ A I +EM +
Sbjct: 269 RVEEAYRILDEMEHA 283
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR-DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCKAG + A L + ++++ AYN +++ + ++++L+ L
Sbjct: 157 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 216
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S + + + L E + + A P S N II ++E+A
Sbjct: 217 IPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS-TYNIIIDMLCLGGRVEEAYR 275
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I D ++ P+L+T NI++D L + ++ + F S + G PD ++Y +L++ L
Sbjct: 276 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 335
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++D F +M ++G + + YT+LI +F G E+ ++F ++ ++ +P +
Sbjct: 336 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLT 395
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + +D + K G+V+ IFE++ S
Sbjct: 396 LLNTYMDCVFKAGEVEKGRMIFEDIRS 422
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A ++R+++ A+L ++ LK +P Y +++ L R L M+E G
Sbjct: 19 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 78
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ TL+ L + ++ L E+ S ++PD++ Y ID FG+ GN++ + + F
Sbjct: 79 GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFF 138
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+++K Q ++P Y S+I L K G++ A +F +M + S
Sbjct: 139 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 181
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
+++LCKA + A R+ +S ++ + C L+ + ID ++++ + +L +
Sbjct: 427 VDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH 486
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT+ R F M +E+++ + ++N + K+ ++EK
Sbjct: 487 DANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRA 546
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF+ +K PD+ +Y+I++ L + G+ + N F +M + G D +YN +++ L
Sbjct: 547 IFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLC 606
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++D EM + P + TY +++D + ++E+ LF + K + I ++
Sbjct: 607 KSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVI 666
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLID K+G++D A I EEM
Sbjct: 667 LYSSLIDGFGKVGRIDEAYLILEEM 691
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + Q++ + L AYN V+ ++ +D ++++L+++ V
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHV 626
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + D + + EE ++I+ + +I F K +I++A L
Sbjct: 627 HPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYL 686
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N ++D L + +++ L F SMKE P+ +Y+ L+N L
Sbjct: 687 ILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLC 746
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++++ + ++++EM + G+ P+++TYT +I + GNI ++ LF K P
Sbjct: 747 RVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSA 806
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
+ +LI+ + + A +FEE
Sbjct: 807 SFNALIEGMSNANRPMEAYQVFEE 830
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 37/262 (14%)
Query: 9 LCKAGNVSAAVRLLQSLR-DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCKAG + A L + ++++ AYN +++ D ++++L+ R
Sbjct: 291 LCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLE------RLRE 344
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
C S++ N I+ K R++++AL +FD
Sbjct: 345 RGCIP-----------------------------SVVSFNSILTCLGKKRKVDEALTLFD 375
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K KP++ TYNI++D+L GRVN+ M+ AG+ P+ +S N +++ L K
Sbjct: 376 VMKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKAN 434
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+L+ F E G P+ +TY +LID G+ G I+++ RLF M + +Y
Sbjct: 435 QLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYT 494
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
SLI N G+ + I++EM
Sbjct: 495 SLIRNFFMHGRKEDGHKIYKEM 516
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 129/254 (50%), Gaps = 1/254 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N ++ LCK+G V A +L+ ++ K++ A Y ++ A+ + +D ++ + ++
Sbjct: 599 NAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKS 658
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L+ Y++ F + + +EE+++ ++ N ++ A K+ +I++
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL+ F +K +KC P+ TY+I+++ L RV + N + M++ G++P+ ++Y T+++
Sbjct: 719 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMIS 778
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K+ + F +G PD ++ ALI+ E+ ++F + + + R
Sbjct: 779 GLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRL 838
Query: 242 SIYVYRSLIDNLKK 255
++ SL+D L K
Sbjct: 839 NVKTCISLLDALNK 852
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 128/278 (46%), Gaps = 7/278 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
C + L ++ + A R++ ++R P +AY ++ A AE + + ++L+ +
Sbjct: 144 CAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQ 203
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S +T RA L ++EV I++ N I F K+ ++
Sbjct: 204 DVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVD 263
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A F +K +PD ++Y ++ +L + GR+ + F M+ VP +YNT++
Sbjct: 264 MAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMI 323
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
R D + E G P ++++ +++ G+ ++E+L LF+ MK+ +
Sbjct: 324 MGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-K 382
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
P+I Y +ID L G+V+ A I +EM +LAG
Sbjct: 383 PNISTYNIIIDMLCMAGRVNEAYKIRDEM-----ELAG 415
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 135/280 (48%), Gaps = 7/280 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ + KAG V + + ++ FLP+ +Y+ ++ + + I + +
Sbjct: 529 NTYMDCVFKAGEVEKGRAIFEDMKSFG-FLPDVRSYSILIHGLTKAGQARETSNIFQAMS 587
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV-VQIASPESIIVVNRIIFAFAKSRQI 119
L + Y + + +EE+ V+ P ++ I+ AK ++
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHP-TVATYGSIVDGLAKIDRL 646
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A ++F+ K + ++I Y+ ++D G+VGR+++ M + G+ P+ ++N+L
Sbjct: 647 DEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 706
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K +D LI F+ M E P+ TY+ LI+ R ++ + +M++Q +
Sbjct: 707 MDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 766
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFE--EMNSSLSDLA 277
P++ Y ++I L K+G + A ++FE + N + D A
Sbjct: 767 IPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSA 806
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 1/257 (0%)
Query: 14 NVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSRTLSSDCYT 72
+++A ++L+ + LPN LVA+ + ++ +F+++ + YT
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYT 180
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
A + L + ++ + S+ + ++ A A+ Q+E AL + D +KG
Sbjct: 181 VLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGS 240
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
+PD++ YN+ +D G+ G V+ F +K G+ PD +SY +++ L K RL
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEA 300
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
F +M P Y +I +G +++ +L ++++ PS+ + S++
Sbjct: 301 EELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTC 360
Query: 253 LKKMGKVDLAMTIFEEM 269
L K KVD A+T+F+ M
Sbjct: 361 LGKKRKVDEALTLFDVM 377
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 4/255 (1%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A +LL+ LR++ +P+ ++N +L + +D + + D++ + Y
Sbjct: 335 AYKLLERLRERGC-IPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIII 392
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
M + +E+ +++ VN ++ K+ Q+E+A IF+ C
Sbjct: 393 DMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCN 452
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ +TY ++D LG+ G+++D F M +AG + I Y +L+ N R +
Sbjct: 453 PNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKI 512
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
++EM G +PDL +D + G +E+ +F DMK P + Y LI L K
Sbjct: 513 YKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTK 572
Query: 256 MGKVDLAMTIFEEMN 270
G+ IF+ M+
Sbjct: 573 AGQARETSNIFQAMS 587
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
SS+ L D Y N F ++ D L +EE+ + ++ +SR++E
Sbjct: 102 SSQPLPPDAY-NAVLPF-LSHDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLED 159
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + ++ LK +P Y +++ L + L M++ G + TL+
Sbjct: 160 AFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVR 219
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + +++ L E+ S ++PD++ Y ID FG+ G+++ + + F+++K +RP
Sbjct: 220 ALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRP 279
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y S++ L K G++ A +F +M +
Sbjct: 280 DDVSYTSMVWVLCKAGRLGEAEELFGQMEA 309
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 7/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK N+ A +LL+ + K ++P+ YN +L + + Q +
Sbjct: 153 NALINGLCKDENIERAYKLLEEMASKG-YVPDNITYNTILSGLCRMGKVSEAKQFFDSM- 210
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
SR S D Y A + + ++V+ + N I+ A+
Sbjct: 211 -PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F + C P+ TY+IVL R +V+D M + G VPD ++YN
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K +D F M ++G PD+++Y+ +++ +T + ++ LF+ M +++
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 389
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P + + L+D L K GK+D A + ++M S
Sbjct: 390 LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS 423
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 123/258 (47%), Gaps = 3/258 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+ G VS A + S+ + + P+ AYN +L A + D + ++ KD++
Sbjct: 188 NTILSGLCRMGKVSEAKQFFDSMPSRG-YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + + +++V + + ++ ++++++
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + + + + PD++TYNI+LD L + V+ F++M + G PD +SY+ +L
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K ++ + F M E + PD++T+ L+D + G ++E+ L + M
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCA 426
Query: 241 PSIYVYRSLIDNLKKMGK 258
P Y +L++ L+K G+
Sbjct: 427 PDYVAYNTLMNGLRKQGR 444
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 8/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I+ K G V A RL + + + +I+ YN +L A + + + ++ K +
Sbjct: 50 IDGYAKKGRVDEANRLYEEMVSVGLEPSIY---TYNSLLNAFCKETKMKEAMELFKTMAE 106
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y+ T T+ L + ++++ + + N +I K IE
Sbjct: 107 KGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIE 166
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + + + PD ITYN +L L R+G+V++ F SM G PD ++YN LL
Sbjct: 167 RAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLL 226
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + D + F+++ G PD +TY +++ R N++E+ +F M
Sbjct: 227 DALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCA 286
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P+ Y ++ + KVD A + EEM+
Sbjct: 287 PNGATYSIVLSGHCRAKKVDDAHKVLEEMS 316
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 131/273 (47%), Gaps = 10/273 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK G + +L + + D I P+ YN ++ A+ +D + ++ ++++
Sbjct: 15 LKSFCKQGKLRDGYKLFEQMLDNGIS-PDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S Y + AF + + + + + ++ + II K+ ++ +AL
Sbjct: 74 LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133
Query: 124 -LIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++F + C + + YN +++ L + + R +L E AS G VPD I+YNT+
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS---KGYVPDNITYNTI 190
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L ++ ++ +F M G PD++ Y L+D+ + G +E+++LF D+ +
Sbjct: 191 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGY 250
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y S++ L + +D A +F++M +S
Sbjct: 251 MPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 123/241 (51%), Gaps = 11/241 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
NG ++ L K G A++L + + K ++P+ YN +L+ A +++D + ++ K ++
Sbjct: 223 NGLLDALYKEGKTDEAMKLFKDVIAKG-YMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 281
Query: 61 VSSRTLSSDCYT----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
S + Y+ RA DD ++L EE+ +I + ++ N ++ K+
Sbjct: 282 ASGCAPNGATYSIVLSGHCRA-KKVDDAHKVL---EEMSKIGAVPDVVTYNILLDGLCKT 337
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++KA +F + C PD+++Y++VL+ L + +V+D F M E +VPD +++
Sbjct: 338 NLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTF 397
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ L K +LD +M SG PD + Y L++ + G ++ RL MK+
Sbjct: 398 NILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457
Query: 237 Q 237
+
Sbjct: 458 K 458
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ +F K ++ +F+ + PD I YNI++D + GRV++ + M G
Sbjct: 14 VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P +YN+LLN K ++ + F+ M E G +PD++TY+ +I +TG + E+L
Sbjct: 74 LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133
Query: 229 R-LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LF+ M ++ + Y +LI+ L K ++ A + EEM S
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS 177
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
+C P+ T+ +VL + G++ D F M + G+ PD I YN L++ K R+D
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ EM G++P + TY +L+++F + ++E++ LF M ++ P + Y ++I
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 253 LKKMGKVDLAMT-IFEEM 269
L K GKV A+ +F +M
Sbjct: 123 LCKTGKVTEALEMLFHKM 140
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+ T+ ++ SF + G + + +LF M I P Y LID K G+VD A +
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 266 FEEMNS 271
+EEM S
Sbjct: 66 YEEMVS 71
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 109/201 (54%)
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
D Y + + T+ L + ++ + ++ N ++ A K ++ +++
Sbjct: 467 DAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEK 526
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+K PD+ +YNI++ GR GRV + + F ++ + PD IS+N+L+N L K
Sbjct: 527 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGD 586
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+D + F+EM E G+ PD++TY+ LI+ FG+T +E + RLF++M + P+I Y
Sbjct: 587 IDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNI 646
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+D L++ G+ A+ ++ ++
Sbjct: 647 LLDCLERSGRTAEAVDLYAKL 667
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 7/246 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP---NAYNCVLVASAETNDIDLSFQILKDLLVS 62
+ L K G+ S A RLL D + +AY +L + + + +L +
Sbjct: 436 VRTLSKLGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSK--IH 493
Query: 63 SRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +S+D Y A + L E++ Q I N +I +F ++ ++E
Sbjct: 494 EKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVE 553
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ IF+ ++ CKPD+I++N +++ LG+ G +++ F M+E G+ PD ++Y+TL+
Sbjct: 554 EAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLI 613
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K ++++ F EM G P+++TY L+D R+G E++ L+ +KQQ +
Sbjct: 614 ECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLT 673
Query: 241 PSIYVY 246
P Y
Sbjct: 674 PDSITY 679
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 135/270 (50%), Gaps = 22/270 (8%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G ++ L Q + +K + PN AYN ++ A A +D K + + S+ + +
Sbjct: 339 KIGKADESLTLFQEMTEKG-YTPNLIAYNTMIQALANNRMVD------KTIFLFSKMVEN 391
Query: 69 DCYTN-FARAFIMTDDCTQ-LLIFIEEVVQIASPESIIVVNRIIFAF-----AKSRQIEK 121
+C N F + I+ + L ++EVV++++ +N+ I+A+ +K +
Sbjct: 392 NCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNK----FMNKSIYAYLVRTLSKLGHASE 447
Query: 122 A--LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A LL + + D Y +L+ L G+ + L+ + + E + D + YNT+
Sbjct: 448 AHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTV 507
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L K+++ + +M + G PD+ +Y LI SFGR G +EE++++F +++
Sbjct: 508 LSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSC 567
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P I + SLI+ L K G +D A F+EM
Sbjct: 568 KPDIISFNSLINCLGKNGDIDEAHMRFKEM 597
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 115/240 (47%), Gaps = 20/240 (8%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
Y C+L A +N+ + +F++ +L L Y A + T L+ +
Sbjct: 227 TYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKLTWNLLLV--C 284
Query: 95 VQIASPESIIVV----NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+QIA + V ++II S ++++ ++F +K C+PD TY I++ + G+
Sbjct: 285 LQIAELLDCLTVALDNDKII-----SVEVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGK 339
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G+ ++ L F M E G P+ I+YNT++ L R +D + F +M E+ +P+ T
Sbjct: 340 IGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFT 399
Query: 211 YTALIDSF---GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++ +++ G+ G ++E + + N + SIY Y L+ L K+G A +
Sbjct: 400 FSVILNVLVAEGQLGRLDEVVEVSNKFMNK----SIYAY--LVRTLSKLGHASEAHRLLH 453
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 111/259 (42%), Gaps = 34/259 (13%)
Query: 48 DIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVN 107
++D + + KD+ YT R + L +E+ + ++I N
Sbjct: 307 EVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYN 366
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDM------- 157
+I A A +R ++K + +F + C+P+ T++++L++L G++GR++++
Sbjct: 367 TMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKF 426
Query: 158 ------------LNEFASMKEAGVV------------PDFISYNTLLNNLRKIRRLDLCL 193
L++ EA + D +Y ++L +L + L
Sbjct: 427 MNKSIYAYLVRTLSKLGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKTTEAL 486
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
++ E I D + Y ++ + G+ + L+ MKQ P I+ Y LI +
Sbjct: 487 DLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSF 546
Query: 254 KKMGKVDLAMTIFEEMNSS 272
+ G+V+ A+ IFEE+ +S
Sbjct: 547 GRAGRVEEAVKIFEELENS 565
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 35/200 (17%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI +N +I F +E+ FD +K + + TY +L R N +
Sbjct: 192 SISTINILIGIFGGGADVERC---FDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVY 248
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRL-------------------------------- 189
++ G D +YN LL+ L K +L
Sbjct: 249 VELRRRGYKLDIFAYNMLLDALAKDNKLTWNLLLVCLQIAELLDCLTVALDNDKIISVEV 308
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
D + F++M +PD TYT +I G+ G +ESL LF +M ++ P++ Y ++
Sbjct: 309 DQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTM 368
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I L VD + +F +M
Sbjct: 369 IQALANNRMVDKTIFLFSKM 388
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 84/198 (42%), Gaps = 36/198 (18%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR------------------ 153
A +S KA ++ ++ K D+ YN++LD L + +
Sbjct: 234 AHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKLTWNLLLVCLQIAELLDC 293
Query: 154 --------------VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
V+ + F MK PD +Y ++ KI + D L F+EM
Sbjct: 294 LTVALDNDKIISVEVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEM 353
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL---KKM 256
E G P+L+ Y +I + +++++ LF+ M + RP+ + + +++ L ++
Sbjct: 354 TEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQL 413
Query: 257 GKVDLAMTIFEE-MNSSL 273
G++D + + + MN S+
Sbjct: 414 GRLDEVVEVSNKFMNKSI 431
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK G V+ A ++ + + + PN YN ++ N++D++ ++ ++
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVE-PNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
DC N +I N +I + K + ++
Sbjct: 343 ------HKDCVAN-----------------------------VISYNTLINGYCKIQSVD 367
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ +F+ + + P+ +TYN ++ L VGR+ D ++ F M G +PD ++Y TL
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R LD + + + S PD+ YT ++D R G +E++ LF+++ + ++
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P+++ Y +I L K G + A +F EMN
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 34/264 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LCK GN SAA+RLL+S+ N PN + F L D L R
Sbjct: 182 INGLCKVGNTSAAIRLLRSMEQGNC-QPNV---------------VVFSTLIDSLCKDRQ 225
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
++ AF IF E + + SP +I+ N +I K + + +
Sbjct: 226 VT--------EAFN---------IFSEMITKGISP-NIVTYNSLIHGLCKLCEWKHVTTL 267
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + K PD+ T N V+D L + G V + + M GV P+ ++YN L++
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+D+ + F M ++++Y LI+ + + ++++++ LF +M +Q++ P+
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI L +G++ A+++F EM
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEM 411
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 113/239 (47%), Gaps = 2/239 (0%)
Query: 33 PNAYNCVLVASA--ETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+ Y +V ++ N +D +F L +L + +T R + + L
Sbjct: 103 PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 162
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ +++ +I K A+ + ++ C+P+++ ++ ++D L +
Sbjct: 163 FDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCK 222
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V + N F+ M G+ P+ ++YN+L++ L K+ EM +S I PD+ T
Sbjct: 223 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 282
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++D+ + G + E+ + + M + + P++ Y +L+D +VD+A+ +F+ M
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P S + NR++ + AK++ L + + PD+ T IV++ L + RV+ +
Sbjct: 67 PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
A + + G PD ++ TL+ L ++ L F +M G +P+++TY LI+
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ GN ++RL M+Q +P++ V+ +LID+L K +V A IF EM
Sbjct: 187 KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM 236
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 104/239 (43%)
Query: 31 FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
FL +++N N +D + +L S+ + + T + LL
Sbjct: 33 FLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL 92
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ P + + +I + +++ A I L +PD T+ ++ L
Sbjct: 93 SRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCV 152
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G++ + L+ F M G P+ ++Y TL+N L K+ + R M + +P+++
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV 212
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ LIDS + + E+ +F++M + I P+I Y SLI L K+ + T+ EM
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C V AV++ ++ K+ + N +YN ++ + +D + + +++
Sbjct: 319 NALMDGHCLRNEVDVAVKVFDTMVHKDC-VANVISYNTLINGYCKIQSVDKAMYLFEEMS 377
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T ++ Y + E+V ++ + K+R ++
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 437
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ + I+G PD+ Y +LD + R G + D + F+++ G+ P+ +YN ++
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ L K L F EM ++G P+ TY + F R ++ L +M
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 551
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 42/224 (18%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC G + A+ L + VA + D+ ++++ L D L
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEM---------------VARGQIPDL-VTYRTLSDYLCK 432
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+R L D LL IE P+ I + I+ ++ ++E A
Sbjct: 433 NRHL---------------DKAMALLKAIEG--SNWDPD-IQIYTTILDGMCRAGELEDA 474
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL--- 179
+F ++ +P++ TYNI++ L + G + + F+ M + G P+ +YN +
Sbjct: 475 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534
Query: 180 -LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
L N +R ++L EM G D+ T T L+ G
Sbjct: 535 FLRNNEALRTIEL----LEEMLARGFSVDVSTTTLLVGMLSDDG 574
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 109/201 (54%)
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
D Y + + T+ L + ++ + ++ N ++ A K ++ +++
Sbjct: 250 DAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEK 309
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+K PD+ +YNI++ GR GRV + + F ++ + PD IS+N+L+N L K
Sbjct: 310 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGD 369
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+D + F+EM E G+ PD++TY+ LI+ FG+T +E + RLF++M + P+I Y
Sbjct: 370 IDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNI 429
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+D L++ G+ A+ ++ ++
Sbjct: 430 LLDCLERSGRTAEAVDLYAKL 450
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 124/249 (49%), Gaps = 9/249 (3%)
Query: 6 IEKLCKAGNVSAAVRL---LQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
+ L K G+ S A RL + S D+ +AY +L + + + +L +
Sbjct: 221 VRTLSKLGHASEAHRLFCNMWSFHDEGD--RDAYMSMLESLCDAGKTTEALDLLSK--IH 276
Query: 63 SRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +S+D Y A + L E++ Q I N +I +F ++ ++E
Sbjct: 277 EKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVE 336
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ IF+ ++ CKPD+I++N +++ LG+ G +++ F M+E G+ PD ++Y+TL+
Sbjct: 337 EAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLI 396
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K ++++ F EM G P+++TY L+D R+G E++ L+ +KQQ +
Sbjct: 397 ECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLT 456
Query: 241 PSIYVYRSL 249
P Y L
Sbjct: 457 PDSITYAVL 465
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 136/268 (50%), Gaps = 20/268 (7%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G ++ L Q + +K + PN AYN ++ A A +D K + + S+ + +
Sbjct: 124 KIGKADESLTLFQEMTEKG-YTPNLIAYNTMIQALANNRMVD------KTIFLFSKMVEN 176
Query: 69 DCYTN-FARAFIMTDDCTQ-LLIFIEEVVQIASPESIIVVNRIIFAF-----AKSRQIEK 121
+C N F + I+ + L ++EVV++++ +N+ I+A+ +K +
Sbjct: 177 NCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNK----FMNKSIYAYLVRTLSKLGHASE 232
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F ++ + D Y +L+ L G+ + L+ + + E + D + YNT+L+
Sbjct: 233 AHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLS 292
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K+++ + +M + G PD+ +Y LI SFGR G +EE++++F +++ +P
Sbjct: 293 ALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKP 352
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I + SLI+ L K G +D A F+EM
Sbjct: 353 DIISFNSLINCLGKNGDIDEAHMRFKEM 380
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 60 LVSSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
LV L +CYT +A + +++ + E+ + I N ++ A AK
Sbjct: 32 LVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDN 91
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++++ ++F +K C+PD TY I++ + G++G+ ++ L F M E G P+ I+YN
Sbjct: 92 KVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYN 151
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID---SFGRTGNIEESLRLFNDM 234
T++ L R +D + F +M E+ +P+ T++ +++ + G+ G ++E + + N
Sbjct: 152 TMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKF 211
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ SIY Y L+ L K+G A +F M S
Sbjct: 212 ----MNKSIYAY--LVRTLSKLGHASEAHRLFCNMWS 242
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 32/270 (11%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN +L A A+ N +D + + KD+ YT R + L +E+
Sbjct: 79 AYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEM 138
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRV 151
+ ++I N +I A A +R ++K + +F + C+P+ T++++L++L G++
Sbjct: 139 TEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQL 198
Query: 152 GRVNDM-------------------LNEFASMKEAGVV----------PDFISYNTLLNN 182
GR++++ L++ EA + D +Y ++L +
Sbjct: 199 GRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLES 258
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + L ++ E I D + Y ++ + G+ + L+ MKQ P
Sbjct: 259 LCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPD 318
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+ Y LI + + G+V+ A+ IFEE+ +S
Sbjct: 319 IFSYNILISSFGRAGRVEEAVKIFEELENS 348
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI +N +I F +E+ FD +K + + TY +L R N +
Sbjct: 9 SISTINILIGIFGGGADVERC---FDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVY 65
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
++ G D +YN LL+ L K ++D + F++M +PD TYT +I G+
Sbjct: 66 VELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKI 125
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +ESL LF +M ++ P++ Y ++I L VD + +F +M
Sbjct: 126 GKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKM 173
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A +S KA ++ ++ K D+ YN++LD L + +V+ + F MK P
Sbjct: 51 AHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEP 110
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D +Y ++ KI + D L F+EM E G P+L+ Y +I + +++++ LF
Sbjct: 111 DEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLF 170
Query: 232 NDMKQQQIRPSIYVYRSLIDNL---KKMGKVDLAMTIFEE-MNSSL 273
+ M + RP+ + + +++ L ++G++D + + + MN S+
Sbjct: 171 SKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSI 216
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 138/268 (51%), Gaps = 7/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK ++ A+ L + + K I PN Y+ ++ + ++L D++
Sbjct: 55 NTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDMI 113
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R ++ D +T A AF+ + +E+V+ + SI+ + +I F +
Sbjct: 114 --ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 171
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F+ + C PD++TYN ++ + RV + + F M + G+V + ++YN
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ L + D+ F+EM G+ P+++TY L+D + G +E+++ +F +++ +
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ P+IY Y +I+ + K GKV+ +F
Sbjct: 292 MEPTIYTYNIMIEGMCKAGKVEDGWDLF 319
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 130/267 (48%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G S A RLL + ++ I P+ ++ ++ A + + + ++ +++ S
Sbjct: 93 ISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 151
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S Y++ F M D + E +V ++ N +I F K +++E+ +
Sbjct: 152 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 211
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGVVPDFISYNTLLNN 182
+F + + +TYNI++ L + G DM E F M GV P+ ++YNTLL+
Sbjct: 212 EVFREMSQRGLVGNTVTYNILIQGLFQAGDC-DMAQEIFKEMVSDGVPPNIMTYNTLLDG 270
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K +L+ ++ F + S ++P + TY +I+ + G +E+ LF ++ + ++P
Sbjct: 271 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 330
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y ++I + G + A +F+EM
Sbjct: 331 VVAYNTMISGFCRKGSKEEADALFKEM 357
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 86/147 (58%)
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + D + C+PDL+TY +V++ L + G + N M++ + P + YNT+++
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K + +D L F+EM GI+P+++TY++LI G ++ RL +DM +++I P
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + +LID K GK+ A +++EM
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEM 147
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL---- 59
+ LCK G+ A LL + ++ P YN ++ + +D + + K++
Sbjct: 23 VNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 81
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+V+ +L S C N+ R D ++LL ++++ + + +I AF K
Sbjct: 82 IRPNVVTYSSLIS-CLCNYGRW----SDASRLL---SDMIERKINPDVFTFSALIDAFVK 133
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A ++D + P ++TY+ +++ R+++ F M PD ++
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNTL+ K +R++ + FREM + G+ + +TY LI + G+ + + +F +M
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P+I Y +L+D L K GK++ AM +FE + S
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 290
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
+ I+ +V ++ ++ K + A + + ++ K +P ++ YN ++D
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + ++D LN F M+ G+ P+ ++Y++L++ L R +M E I PD
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ T++ALID+F + G + E+ +L+++M ++ I PSI Y SLI+ ++D A +FE
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 268 EMNS 271
M S
Sbjct: 181 FMVS 184
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 36/266 (13%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ L K G+ S A RL C + + D D +L+ L S +
Sbjct: 366 FVRTLSKLGHSSEAHRLF---------------CNMWNVHDKGDKDAYMSMLESLCSSGK 410
Query: 65 TLSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ D F I TD I+ N + A + +Q+
Sbjct: 411 IAEAIDLLNRFHEKCITTD--------------------TIMYNTVFTALGRLKQVSHIH 450
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+++ +K PD+ TYNI++ GR GRV+ + F ++ + PD ISYN+L+N L
Sbjct: 451 DLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCL 510
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +D + F+EM E G+ PD++TY+ LI+ FG+T +E + LF++M + P++
Sbjct: 511 GKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNL 570
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L++ G+ A+ ++ ++
Sbjct: 571 VTYNILLDCLERSGRTAEAVDLYAKL 596
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 3/199 (1%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + ++ DC + ++++ I N ++ A AK ++++KA +F+ +K
Sbjct: 191 YKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMK 250
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C+PD TY I++ + G+ G+ ++ L F +M E G + I+YNT++ L K R D
Sbjct: 251 RRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMAD 310
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++ F +M E+G +P+ TY+ L++ G + + L +M ++ + IY Y +
Sbjct: 311 KAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNK-LDNIVEMSKKYMNKQIYAY--FV 367
Query: 251 DNLKKMGKVDLAMTIFEEM 269
L K+G A +F M
Sbjct: 368 RTLSKLGHSSEAHRLFCNM 386
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 114/270 (42%), Gaps = 32/270 (11%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
A+N +L A A+ +D ++++ +D+ + YT R + L + +
Sbjct: 225 AFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAM 284
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
++ ++I N +I A AK R +KA+L+F + C+P+ TY+++L++L G++
Sbjct: 285 LEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQL 344
Query: 155 NDMLN--------------------------------EFASMKEAGVVPDFISYNTLLNN 182
N + N F +M D +Y ++L +
Sbjct: 345 NKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLES 404
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L ++ + E I D + Y + + GR + L+ MKQ P
Sbjct: 405 LCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPD 464
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+ Y LI + + G+VD A+ IFEE+ +S
Sbjct: 465 IFTYNILISSYGRAGRVDSAVKIFEELENS 494
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Query: 104 IVVNRIIFAFAKSR---QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ NR+ ++S + E+ + D ++ K + T NI++ G + R ++
Sbjct: 122 FIYNRLFLTLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILIGFFGDLDRCVGLV-- 179
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
K+ G+ + SY LL ++R D + +M G D+ + L+D+ +
Sbjct: 180 ----KKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAK 235
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++ ++F DMK++ P + Y +I K GK D ++ +F+ M
Sbjct: 236 DQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAM 284
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+Y +L R+ + + M G D ++N LL+ L K +++D F +M
Sbjct: 190 SYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDM 249
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+PD TYT +I G+ G +ESL LF M ++ ++ Y ++I+ L K
Sbjct: 250 KRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMA 309
Query: 260 DLAMTIFEEM 269
D A+ +F +M
Sbjct: 310 DKAVLLFSKM 319
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK G V+ A ++ + + + PN YN ++ N++D++ ++ ++
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVE-PNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
DC N +I N +I + K + ++
Sbjct: 343 ------HKDCVAN-----------------------------VISYNTLINGYCKIQSVD 367
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ +F+ + + P+ +TYN ++ L VGR+ D ++ F M G +PD ++Y TL
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R LD + + + S PD+ YT ++D R G +E++ LF+++ + ++
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P+++ Y +I L K G + A +F EMN
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 34/264 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LCK GN SAA+RLL+S+ N PN + F L D L R
Sbjct: 182 INGLCKVGNTSAAIRLLRSMEQGNC-QPNV---------------VVFSTLIDSLCKDRQ 225
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
++ AF IF E + + SP +I+ N +I K + + +
Sbjct: 226 VT--------EAFN---------IFSEMITKGISP-NIVTYNSLIHGLCKLCEWKHVTTL 267
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + K PD+ T N V+D L + G V + + M GV P+ ++YN L++
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+D+ + F M ++++Y LI+ + + ++++++ LF +M +Q++ P+
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI L +G++ A+++F EM
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEM 411
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 113/239 (47%), Gaps = 2/239 (0%)
Query: 33 PNAYNCVLVASA--ETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+ Y +V ++ N +D +F L +L + +T R + + L
Sbjct: 103 PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 162
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ +++ +I K A+ + ++ C+P+++ ++ ++D L +
Sbjct: 163 FDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCK 222
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V + N F+ M G+ P+ ++YN+L++ L K+ EM +S I PD+ T
Sbjct: 223 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 282
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++D+ + G + E+ + + M + + P++ Y +L+D +VD+A+ +F+ M
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P S + NR++ + AK++ L + + PD+ T IV++ L + RV+ +
Sbjct: 67 PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
A + + G PD ++ TL+ L ++ L F +M G +P+++TY LI+
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ GN ++RL M+Q +P++ V+ +LID+L K +V A IF EM
Sbjct: 187 KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM 236
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 104/239 (43%)
Query: 31 FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
FL +++N N +D + +L S+ + + T + LL
Sbjct: 33 FLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL 92
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ P + + +I + +++ A I L +PD T+ ++ L
Sbjct: 93 SRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCV 152
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G++ + L+ F M G P+ ++Y TL+N L K+ + R M + +P+++
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV 212
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ LIDS + + E+ +F++M + I P+I Y SLI L K+ + T+ EM
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C V AV++ ++ K+ + N +YN ++ + +D + + +++
Sbjct: 319 NALMDGHCLRNEVDVAVKVFDTMVHKDC-VANVISYNTLINGYCKIQSVDKAMYLFEEMS 377
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T ++ Y + E+V ++ + K+R ++
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 437
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ + I+G PD+ Y +LD + R G + D + F+++ G+ P+ +YN ++
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ L K L F EM ++G P+ TY + F R ++ L +M
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 551
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC G + A+ L + VA + D+ ++++ L D L
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEM---------------VARGQIPDL-VTYRTLSDYLCK 432
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+R L D LL IE P+ I + I+ ++ ++E A
Sbjct: 433 NRHL---------------DKAMALLKAIEG--SNWDPD-IQIYTTILDGMCRAGELEDA 474
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL--- 179
+F ++ +P++ TYNI++ L + G + + F+ M + G P+ +YN +
Sbjct: 475 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534
Query: 180 -LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
L N +R ++L EM G D+ T T L+ G +++S++
Sbjct: 535 FLRNNEALRTIEL----LEEMLARGFSVDVSTTTLLVGMLSDDG-LDQSVK 580
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 131/253 (51%), Gaps = 4/253 (1%)
Query: 20 RLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAF 78
RL++S+ +D+ +N ++ E N ++ + Q L ++ Y++ + F
Sbjct: 16 RLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVF 75
Query: 79 IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDL 138
+ D L+ +++++ N +I + AK+ Q+E+A +F + L PD+
Sbjct: 76 MKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDV 135
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
TY I++ LG +GR++ ++ F SM G P+ +Y+++++ R+D F++
Sbjct: 136 YTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQ 195
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M + G++PD +TY LID+FG+TG +E R F+ + + + + Y SL+ +L + G
Sbjct: 196 MVQKGLQPDAVTYNILIDAFGKTGQLE---RAFDFVGKSRSFTNEVTYNSLLSSLGRKGD 252
Query: 259 VDLAMTIFEEMNS 271
+ M +F +M +
Sbjct: 253 IQGLMELFGQMKA 265
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 94/167 (56%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ +N ++ +K+ ++E A +F +K D +TYNI+++ LGR G+++
Sbjct: 307 IVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLL 366
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+E G P+ I+YNTL+++ K L F EM E G+ P++++Y++LI+ FG+ G
Sbjct: 367 EMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAG 426
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ LF +MK + P+ Y LID L + G+ AM EM
Sbjct: 427 RTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREM 473
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 6/266 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVASAET-NDIDLSFQILKDLLVSS 63
I+ L KA V A + + N+ P+ Y +L+ S T ID ++ + +
Sbjct: 107 IDSLAKADQVEEACNVFGDMFKLNVS-PDVYTYTILIRSLGTIGRIDAVMKLFESMTAQG 165
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + AF + +++VQ + N +I AF K+ Q+E+A
Sbjct: 166 CQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA- 224
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
FD + + + +TYN +L LGR G + ++ F MK G+V + ++Y L+ L
Sbjct: 225 --FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERL 282
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R++ + EM ++ IK D++T ++D + G +E + LF DMK + +
Sbjct: 283 GWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADT 342
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI+ L + GK+D A + EM
Sbjct: 343 VTYNILINGLGRAGKLDAAGALLLEM 368
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 41/303 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L G + A ++L +S+ + PN Y+ V+ A +D + I + ++
Sbjct: 142 IRSLGTIGRIDAVMKLFESMTAQGC-QPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKG 200
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y AF T + F+ + + + N ++ + + I+ +
Sbjct: 201 LQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNE---VTYNSLLSSLGRKGDIQGLM 257
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K + +TY I+++ LG GRV D+ + M + + D ++ N +L+ L
Sbjct: 258 ELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCL 317
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG--------------------- 222
K R++ F++M G+ D +TY LI+ GR G
Sbjct: 318 SKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNI 377
Query: 223 --------------NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
N+ + RLF +MK++ + P++ Y SLI+ K G+ D A+++F E
Sbjct: 378 ITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFRE 437
Query: 269 MNS 271
M +
Sbjct: 438 MKA 440
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 13/217 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI-FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
IE+L AG V +L + D +I + N VL ++ ++ +F++ +D+ +
Sbjct: 279 IERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDM--KFK 336
Query: 65 TLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
L++D T RA + D LL+ +EE +II N +I ++ K
Sbjct: 337 GLNADTVTYNILINGLGRAGKL-DAAGALLLEMEEN---GCAPNIITYNTLISSYGKWSN 392
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A +F +K P++++Y+ +++ G+ GR + ++ F MK G P+ ++YN
Sbjct: 393 LSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNL 452
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
L++ L + R + Y REM ++G + +T + L+
Sbjct: 453 LIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 138/268 (51%), Gaps = 7/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK ++ A+ L + + K I PN Y+ ++ + ++L D++
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R ++ D +T A AF+ + +E+V+ + SI+ + +I F +
Sbjct: 319 --ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F+ + C PD++TYN ++ + RV + + F M + G+V + ++YN
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ L + D+ F+EM G+ P+++TY L+D + G +E+++ +F +++ +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ P+IY Y +I+ + K GKV+ +F
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 101/185 (54%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ + ++++ + + N +I + +A+ + D + C+PDL+TY +V
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
++ L + G + N M++ + P + YNT+++ L K + +D L F+EM GI
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+P+++TY++LI G ++ RL +DM +++I P ++ + +LID K GK+ A
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 265 IFEEM 269
+++EM
Sbjct: 348 LYDEM 352
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 130/267 (48%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G S A RLL + ++ I P+ ++ ++ A + + + ++ +++ S
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S Y++ F M D + E +V ++ N +I F K +++E+ +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGVVPDFISYNTLLNN 182
+F + + +TYNI++ L + G DM E F M GV P+ ++YNTLL+
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDC-DMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K +L+ ++ F + S ++P + TY +I+ + G +E+ LF ++ + ++P
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y ++I + G + A +F+EM
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL---- 59
+ LCK G+ A LL + ++ P YN ++ + +D + + K++
Sbjct: 228 VNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+V+ +L S C N+ R D ++LL ++++ + + +I AF K
Sbjct: 287 IRPNVVTYSSLIS-CLCNYGR----WSDASRLL---SDMIERKINPDVFTFSALIDAFVK 338
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A ++D + P ++TY+ +++ R+++ F M PD ++
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNTL+ K +R++ + FREM + G+ + +TY LI + G+ + + +F +M
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P+I Y +L+D L K GK++ AM +FE + S
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C+ + A+ +L + K + PN + +L + I + ++ + V+
Sbjct: 123 INCFCRRSQLPLALAVLGKMM-KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ + + + ++ + I+ +V ++ ++ K + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + ++ K +P ++ YN ++D L + ++D LN F M+ G+ P+ ++Y++L++ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R +M E I PD+ T++ALID+F + G + E+ +L+++M ++ I PSI
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y SLI+ ++D A +FE M S
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 92/180 (51%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ + P + + +I F + Q+ AL + + L +P+++T + +L+
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R+++ + M G P+ +++NTL++ L + + M G +PDL+TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ + G+ + + L N M+Q ++ P + +Y ++ID L K +D A+ +F+EM +
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 57/117 (48%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+++D + F M ++ P I ++ LL+ + K+ + D+ + +M GI + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ F R + +L + M + P+I SL++ ++ A+ + ++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK G V+ A ++ + + + PN YN ++ N++D++ ++ ++
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGVE-PNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
DC N +I N +I + K + ++
Sbjct: 283 ------HKDCVAN-----------------------------VISYNTLINGYCKIQSVD 307
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ +F+ + + P+ +TYN ++ L VGR+ D ++ F M G +PD ++Y TL
Sbjct: 308 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 367
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R LD + + + S PD+ YT ++D R G +E++ LF+++ + ++
Sbjct: 368 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 427
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P+++ Y +I L K G + A +F EMN
Sbjct: 428 PNVWTYNIMIHGLCKQGLLAEASKLFSEMN 457
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 126/272 (46%), Gaps = 7/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC LL + + I +PN ++ V+ A + I ++ ++ D++
Sbjct: 677 NSLIHALCNLCEWKHVTTLLNEMVNSKI-MPNVVVFSTVVDALCKEGMIAIAHDVV-DMM 734
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R + D YT + + + + + +V ++ N +I + + ++
Sbjct: 735 IK-RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 793
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++KA+ + + + D +TYN ++ L VGR+ + F M +G +PD ++Y
Sbjct: 794 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 853
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K L ++ + + S + D+L Y ID R G +E + LF+++ +
Sbjct: 854 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 913
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P + Y +I L K G +D A +F +M+
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 945
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 93/179 (51%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ +++++ +I +I +AL +FD + G +P+++TY +++ L +
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V + N F+ M G+ P+ ++YN+L++ L K+ EM +S I PD+ T
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++D+ + G + E+ + + M + + P++ Y +L+D +VD+A+ +F+ M
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 86/154 (55%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++++A+ +FD + C P++ +YNI+++ ++ R++ + M G++ D ++YN
Sbjct: 758 EMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYN 817
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ L + RL + F EM SG PDL+TY L+D + ++ E++ L ++
Sbjct: 818 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 877
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ I VY ID + + G+++ A +F ++S
Sbjct: 878 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 911
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
IF E + + SP +I+ N +I K + + + + + K PD+ T N V+D L
Sbjct: 172 IFSEMITKGISP-NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 230
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G V + + M GV P+ ++YN L++ +D+ + F M ++
Sbjct: 231 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 290
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++Y LI+ + + ++++++ LF +M +Q++ P+ Y +LI L +G++ A+++F E
Sbjct: 291 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 350
Query: 269 M 269
M
Sbjct: 351 M 351
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
Query: 63 SRTLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ +S D +T + + + C + + E+V +++V + ++ A K I
Sbjct: 666 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 725
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + D + +PD++TY ++D +++ + F +M G VP+ SYN L+
Sbjct: 726 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 785
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N +I+R+D + +M G+ D +TY LI G ++ ++ LF++M
Sbjct: 786 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 845
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + YR L+D L K + AM + + + S
Sbjct: 846 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 877
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P S + NR++ + AK++ L + + PD+ T IV++ L + RV+ +
Sbjct: 42 PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 101
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
A + + G PD ++ TL+ L ++ L F +M G +P+++TY LI+
Sbjct: 102 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 161
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + E+ +F++M + I P+I Y SLI L K+ + T+ EM
Sbjct: 162 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 211
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 10/168 (5%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ +NR+ FAF+ +I K L +PD T+ ++ L G++ + L+ F
Sbjct: 89 SLCHLNRVDFAFSALAKILK----------LGHQPDATTFTTLIRGLCVEGKIGEALHLF 138
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M G P+ ++Y TL+N L K R++ F EM GI P+++TY +LI +
Sbjct: 139 DKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 198
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L N+M +I P ++ +++D L K G V A + + M
Sbjct: 199 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 246
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C V AV++ ++ K+ + N +YN ++ + +D + + +++
Sbjct: 259 NALMDGHCLRNEVDVAVKVFDTMVHKDC-VANVISYNTLINGYCKIQSVDKAMYLFEEMS 317
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T ++ Y + E+V ++ + K+R ++
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 377
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ + I+G PD+ Y +LD + R G + D + F+++ G+ P+ +YN ++
Sbjct: 378 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 437
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ L K L F EM ++G P+ TY + F R ++ L +M
Sbjct: 438 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 491
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 48/206 (23%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + +N +I +F R++ A + + L +PD++TY ++N
Sbjct: 613 PPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGT-------------LMN 659
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES----------------- 202
M G+ PD +YN+L++ L + EM S
Sbjct: 660 GLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 719
Query: 203 ------------------GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
G++PD++TYTAL+D ++E++++F+ M + P++
Sbjct: 720 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVR 779
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y LI+ ++ ++D AM + E+M+
Sbjct: 780 SYNILINGYCQIQRMDKAMGLLEQMS 805
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N +I +++ A+ +F + PDL+TY I+LD L + + + + +
Sbjct: 814 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 873
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ + + D + YN ++ + + L+ F + G++PD+ TY +I + G
Sbjct: 874 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 933
Query: 224 IEESLRLFNDMKQQQIRPSIYVYR---SLIDNLKKMGKVDLAMTI---FEEM 269
++E+ +LF M + I + R SLI + ++DL +I FE+M
Sbjct: 934 LDEANKLFRKMDENDIWSNSTSSRNQKSLIYQKIMLPEIDLVYSISVMFEKM 985
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 117/290 (40%), Gaps = 41/290 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G ++ A +L + +KN PN YN + N+ + ++L+++L
Sbjct: 434 NIMIHGLCKQGLLAEASKLFSEM-NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 492
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQI-ASPES----------------- 102
+R S D T +++DD + V QI P S
Sbjct: 493 --ARGFSVDVSTTTLLVGMLSDDGLD-----QSVKQILCKPSSSSRPSGTQMRSLPPLFL 545
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
N + ++ AL F+ + + P + + +L + ++ + +L+
Sbjct: 546 SSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLST 605
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G+ PD + N L+N+ +RRL ++ + G +PD++TY L++ +
Sbjct: 606 QMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-- 663
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M + I P I+ Y SLI L + + T+ EM +S
Sbjct: 664 -----------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 702
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 43/251 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC G + A+ L + VA + D+ ++++ L D L
Sbjct: 329 NTLIHGLCHVGRLQDAISLFHEM---------------VARGQIPDL-VTYRTLSDYLCK 372
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+R L D LL IE P+ I + I+ ++ ++E A
Sbjct: 373 NRHL---------------DKAMALLKAIEG--SNWDPD-IQIYTTILDGMCRAGELEDA 414
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL--- 179
+F ++ +P++ TYNI++ L + G + + F+ M + G P+ +YN +
Sbjct: 415 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 474
Query: 180 -LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L N +R ++L EM G D+ T T L+ G +++S++
Sbjct: 475 FLRNNEALRTIEL----LEEMLARGFSVDVSTTTLLVGMLSDDG-LDQSVKQILCKPSSS 529
Query: 239 IRPSIYVYRSL 249
RPS RSL
Sbjct: 530 SRPSGTQMRSL 540
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 11/278 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC +S A RL ++ P+ Y ++ T +I+++ ++ +++L
Sbjct: 143 NTLIKGLCMEHRISEATRLFLRMQKLGC-TPDVVTYGTLIKGLCGTGNINIALKLHQEML 201
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQL-------LIFIEEVVQIASPESIIVVNRIIFAF 113
+C N I+ D ++ +F E Q P SII N +I F
Sbjct: 202 NDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP-SIISYNSLIHGF 260
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ + E++ + D + +PD++T+N+++D L + G+V + M E+G+VPD
Sbjct: 261 CCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 320
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YN+L+ + L+ F M G +PD+++Y LI+ + +T +EE+++L+N+
Sbjct: 321 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 380
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M RP++ Y SL+ + GKVD A +F M +
Sbjct: 381 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 418
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 7/274 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSL-----RDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
I+ LC GN++ A++L Q + R + PN YN ++ + D + Q+ ++
Sbjct: 181 IKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEE 240
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ S Y + F + ++E++ ++ N +I K +
Sbjct: 241 MKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGK 300
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A + + PDL+TYN +++ VG +N F SM G PD ISYN
Sbjct: 301 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 360
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N K +++ + + EM G +P+++TY +L+ G ++++ +LF+ MK
Sbjct: 361 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 420
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I + Y Y +D L K + AM +F E+ SS
Sbjct: 421 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 454
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
T L F +++ S+ N ++ AK + + +++ ++ D T NI+
Sbjct: 51 THALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNIL 110
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
L+ L V R+ + FA + G P+ ++YNTL+ L R+ F M + G
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC 170
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRL----FNDMKQQQI--RPSIYVYRSLIDNLKKMGK 258
PD++TY LI TGNI +L+L ND+ + +I +P++ Y ++D L K+G+
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230
Query: 259 VDLAMTIFEEMNS 271
D A +FEEM +
Sbjct: 231 EDEAKQLFEEMKT 243
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 127/273 (46%), Gaps = 5/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C AG + RLL + D+ + P+ +N ++ + + + ++L ++
Sbjct: 254 NSLIHGFCCAGKWEESKRLLDEMLDQGL-QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 312
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S Y + F M D +F+ + P+ +I N +I ++K+ ++
Sbjct: 313 ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPD-VISYNVLINGYSKTLKV 371
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A+ +++ + + +P++ITY+ +L + G+V+D F+ MK G+ + +Y
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 431
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L K L + F E+ S K ++ LID + G +E + LF + +
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y +I + G+VD A + ++M ++
Sbjct: 492 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 524
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 128/274 (46%), Gaps = 15/274 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G A +L + ++ + + +P+ +YN ++ + S ++L ++L
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGM-IPSIISYNSLIHGFCCAGKWEESKRLLDEML--D 278
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ L D T + + + L + IE + P+ ++ N +I F
Sbjct: 279 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI---VPD-LVTYNSLIEGFCMVG 334
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ A +F + C+PD+I+YN++++ + +V + + + M G P+ I+Y+
Sbjct: 335 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 394
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+LL + ++D F M GI + TY +D + + E+++LF ++K
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 454
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ I LID L K GK++ A +FE++++
Sbjct: 455 NFKLEIENLNCLIDGLCKAGKLETAWELFEKLSN 488
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 119/257 (46%), Gaps = 7/257 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N IE C G++++A L S+ K P+ +YN ++ ++T ++ + ++ ++L
Sbjct: 324 NSLIEGFCMVGDLNSARELFVSMPSKGC-EPDVISYNVLINGYSKTLKVEEAMKLYNEML 382
Query: 61 VSSRTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + + Y + + + D + L + + IA E+ + K+
Sbjct: 383 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA--ENSYTYGIFLDGLCKNDC 440
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A+ +F +K K ++ N ++D L + G++ F + G P+ ++Y
Sbjct: 441 LFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTI 500
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + ++D + ++M +G PD++TY L+ F + +EE ++L + M Q+
Sbjct: 501 MIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 560
Query: 239 IRPSIYVYRSLIDNLKK 255
+ P ++D L K
Sbjct: 561 VSPDAITCSIVVDMLSK 577
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P L ++N +L L ++ + + + + M+ +G+ D + N LLN L + RL
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F + G P+++TY LI I E+ RLF M++ P + Y +LI L
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 256 MGKVDLAMTIFEEMNSSLS 274
G +++A+ + +EM + +S
Sbjct: 187 TGNINIALKLHQEMLNDIS 205
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
+N +I K+ ++E A +F+ + +P+++TY I++ R G+V+ M+
Sbjct: 463 LNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKME 522
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
G PD I+YNTL+ + +L+ + M + + PD +T + ++D + +
Sbjct: 523 ANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQ 582
Query: 226 ESLRLF 231
E L L
Sbjct: 583 ECLHLL 588
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 50/104 (48%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
E++ +++ +I F + Q++KA ++ ++ C PD+ITYN ++
Sbjct: 482 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 541
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
++ +++ M + V PD I+ + +++ L K + CL
Sbjct: 542 ESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 585
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
+++ LCK + A++L L+ N L NC++ + ++ ++++ + L
Sbjct: 431 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 490
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT F + + I+++ II N ++ F +S ++E+ +
Sbjct: 491 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 550
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
+ + PD IT +IV+D+L + + + L+
Sbjct: 551 QLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLH 586
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 148/302 (49%), Gaps = 40/302 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G AA+ LL+ + D N+ PN Y+ ++ + ++ +F + +++
Sbjct: 169 IHGLCKVGETRAALDLLRRV-DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG 227
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + Y+ F + +F + +++ P+ + N ++ F K ++++
Sbjct: 228 ISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPD-VYTFNILVDGFCKDGKMKEG 286
Query: 123 LLIFDHI--KGLK---------------------------------CKPDLITYNIVLDI 147
+F + +G+K PD+ +YNI++D
Sbjct: 287 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDG 346
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
++ +V++ +N F M ++PD ++YN+L++ L K+ ++ L EM + G+ PD
Sbjct: 347 FCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPD 406
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++TY++++D+ + +++++ L +K Q IRP++Y Y LID L K G+++ A IFE
Sbjct: 407 IITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFE 466
Query: 268 EM 269
++
Sbjct: 467 DL 468
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F K +++++A+ +F + PD++TYN ++D L ++G+++ L M +
Sbjct: 341 NILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 400
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV PD I+Y+++L+ L K ++D + ++ + GI+P++ TYT LID + G +E+
Sbjct: 401 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLED 460
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
+ +F D+ + ++ Y +I G D A+ + +M NS + D
Sbjct: 461 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPD 511
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 99/200 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + + Q L+F + VV + + +I K + AL + +
Sbjct: 130 FTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVD 189
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G +P+++ Y+ ++D + + VND + ++ M G+ P+ ++Y+ L++ + +L
Sbjct: 190 GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLK 249
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F +M IKPD+ T+ L+D F + G ++E +F M +Q I+P++ Y SL+
Sbjct: 250 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
D + +V+ A +I M+
Sbjct: 310 DGYCLVKEVNKAKSILYTMS 329
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++++ + II K + + A ++ + P+++TY+ ++ VG++ D ++ F
Sbjct: 196 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLF 255
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + PD ++N L++ K ++ F M + GIKP+++TY +L+D +
Sbjct: 256 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 315
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ ++ + M Q+ + P I Y LID K+ KVD AM +F+EM+
Sbjct: 316 KEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHH 365
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I K +I AL + D + PD+ITY+ +LD L + +V+ +
Sbjct: 372 VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLT 431
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K+ G+ P+ +Y L++ L K RL+ F ++ G + TYT +I F G
Sbjct: 432 KLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 491
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+E+L L + MK P Y +I +L
Sbjct: 492 LFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 105/239 (43%), Gaps = 21/239 (8%)
Query: 52 SFQILKD-----LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
SFQ LK+ + SS ++ Y++ + F +D +++ I
Sbjct: 20 SFQFLKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEF 79
Query: 107 NRIIFAFAKSRQ---------------IEKALLIFDHIKGL-KCKPDLITYNIVLDILGR 150
N+I+ + KS+ I L F H L P+ IT+ ++ L
Sbjct: 80 NKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCL 139
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G+++ L ++ G D + Y TL++ L K+ L R + + ++P+++
Sbjct: 140 KGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVM 199
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ +ID + ++ ++ L+++M + I P++ Y +LI +G++ A+ +F +M
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 3/214 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C V+ A +L ++ + + P+ +YN ++ + +D + + K++
Sbjct: 309 MDGYCLVKEVNKAKSILYTMSQRGVN-PDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH 367
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + L ++E+ P II + I+ A K+ Q++KA+
Sbjct: 368 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 427
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ +K +P++ TY I++D L + GR+ D N F + G +Y +++
Sbjct: 428 ALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGF 487
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
D L +M ++ PD +TY +I S
Sbjct: 488 CNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRS 521
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 135/274 (49%), Gaps = 19/274 (6%)
Query: 6 IEKLCKAGNVSAAVRL----LQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I +C G + AV L ++S + ++ +YN ++ + + +++ + K
Sbjct: 170 INGVCNEGKIKVAVELYNEMVRSGHEPDVI---SYNTLINGLCNSGNTNMAVHVFK---- 222
Query: 62 SSRTLSSDCYTNFARAFIMTDD-CTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAK 115
+ + C N + D C L+ F+ E+V P I N I+
Sbjct: 223 --KMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCC 280
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
Q+ +A +F ++ CKPD++TYNI++D L + VND + + M + G+ PD ++
Sbjct: 281 LGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVT 340
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y T+L+ L + +L+ + F++M + G KPD++ Y +IDS + + +++ ++M
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMV 400
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I P+ Y +++ +G++D A +F+EM
Sbjct: 401 DRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 138/271 (50%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK V+ A+ L + D+ I PNA Y+ +L +D + Q+ K+++
Sbjct: 377 NTIIDSLCKDRLVNDAMEFLSEMVDRGI-PPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ ++ ++ E + + +I N ++ + ++
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMN 495
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + G C PDL +YNI+++ R++ M + P+ ++YNT++
Sbjct: 496 EARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIM 555
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + RL F++M SG+ P L+TY+ L++ + G+++E+L+LF MK++++
Sbjct: 556 KGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLE 615
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P I +Y LI+ + GK+++A +F ++++
Sbjct: 616 PDIILYTILIEGMFIGGKLEVAKGLFSKLSA 646
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+ E+V P ++ I+ Q+ +A+ +F ++ CKPD++ YN ++D L
Sbjct: 325 FLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLC 384
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ VND + + M + G+ P+ ++Y+T+L+ + +LD F+EM + P+ L
Sbjct: 385 KDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTL 444
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T++ L+D + G + E+ +F M ++ + P+IY Y +L++ K++ A +FE M
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM 504
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 89/167 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+I +I +I+ A+ +++ + +PD+I+YN +++ L G N ++ F
Sbjct: 163 VITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFK 222
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M++ G P+ ++YNT++++L K R ++ + + EM GI PD +TY +++ G
Sbjct: 223 KMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLG 282
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E+ RLF M+Q +P + Y +ID+L K V+ A EM
Sbjct: 283 QLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEM 329
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 90/168 (53%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ + + + AK +Q + + + + + + NI+++ L R+ V+ ++ +
Sbjct: 92 SIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVW 151
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G+ PD I++ TL+N + ++ + + + EM SG +PD+++Y LI+ +
Sbjct: 152 GKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNS 211
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
GN ++ +F M+Q +P++ Y ++ID+L K V+ AM EM
Sbjct: 212 GNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEM 259
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 92/169 (54%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++ +N +I + ++ A+ ++ + L +PD+IT+ +++ + G++ +
Sbjct: 126 HTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVEL 185
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ M +G PD ISYNTL+N L ++ + F++M ++G KP+++TY +IDS +
Sbjct: 186 YNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCK 245
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++ ++M + I P Y S++ L +G+++ A +F+ M
Sbjct: 246 DRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRM 294
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 80/151 (52%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ AL F + + +P ++ + L + ++ + + ++ M GV S N
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L ++ +D + + +M + GI+PD++T+T LI+ G I+ ++ L+N+M +
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y +LI+ L G ++A+ +F++M
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 19/243 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQIL----- 56
++ LC+ G VS A + +++ +K NI+ NA + N+ F+I+
Sbjct: 450 VDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGC 509
Query: 57 -KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
DL S + + Y N R D LL + V+ +P ++ N I+
Sbjct: 510 APDL--HSYNILINGYCNSRRM----DKAKALLT--QMSVKKLTPNTV-TYNTIMKGLCY 560
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ A +F + P L+TY+I+L+ L + G +++ L F SMKE + PD I
Sbjct: 561 VGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIIL 620
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y L+ + +L++ F ++ GI+P TY +I + G +E+ LF K
Sbjct: 621 YTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWK 680
Query: 236 QQQ 238
+
Sbjct: 681 MMK 683
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 21/288 (7%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--------ETNDI-DLS 52
CN + LC G LL + D I +PNA + V A + +D+ D+
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKI-MPNAISLTTVVDALCKEGMVAQAHDVVDMM 310
Query: 53 FQ--ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
FQ + D++ YT + + + + + +V ++ N +I
Sbjct: 311 FQSGVEPDVVT---------YTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLI 361
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
+ K +++KA+ +F+ + K P+ +TYN ++ L VGR+ D + F M G +
Sbjct: 362 NGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQI 421
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++Y LL+ L K LD + + + S + PD+ YT +ID R G +E++ L
Sbjct: 422 PDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDL 481
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
F+++ + ++P+++ Y + L K G +D A +F EM+ + G
Sbjct: 482 FSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADG 529
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LCK G+ SAA+RLL+S+ N D++V
Sbjct: 186 INGLCKTGHTSAAIRLLRSMEKGNC-------------------------QPDVVVYGTL 220
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ S C TQ E++ +I+ N +++A + + +
Sbjct: 221 IHSLCKDRQQ---------TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTL 271
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + K P+ I+ V+D L + G V + M ++GV PD ++Y L++
Sbjct: 272 LNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCL 331
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+D + F M G P++ +Y LI+ + + +++++ LF +M +Q++ P+
Sbjct: 332 RSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVT 391
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI L +G++ A+ +F EM
Sbjct: 392 YNTLIHGLCHVGRLQDAIALFREM 415
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P ++ +N +I +F ++ A + I L C+PD ++ ++ L G++ + L+
Sbjct: 106 PHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALH 165
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M G PD + Y TL+N L K + R M + +PD++ Y LI S
Sbjct: 166 LFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLC 225
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ LF++M + I P+I SL+ L +G+ T+ EM S
Sbjct: 226 KDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ + P SI+ +I+ + K ++ L + + ++ T N++++ + R
Sbjct: 65 MLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNR 124
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
VN + A + + G PD S+ TL+ L ++ L F +M G +PD++ Y
Sbjct: 125 VNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYAT 184
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ +TG+ ++RL M++ +P + VY +LI +L K + A +F EM
Sbjct: 185 LINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEM 240
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
QI +AL +FD + +PD++ Y +++ L + G + + SM++ PD + Y
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL+++L K R+ F EM GI P+++T +L+ + G + L N+M
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+I P+ +++D L K G V A + + M S
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQS 313
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ I SP ++ NR + ++ AL F+ + + P ++ + +L + +V R
Sbjct: 30 MLSIPSPFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKR 89
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ +L+ M G+ + + N L+N+ + R++ ++ + G +PD ++T
Sbjct: 90 YSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTT 149
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI G I E+L LF+ M + +P + +Y +LI+ L K G A+ + M
Sbjct: 150 LIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM 205
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 3/231 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C + AV++ + K PN +YN ++ + +D + + +++
Sbjct: 326 IDGHCLRSEMDEAVKVFDMMVHKGC-APNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK 384
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + E+V ++ ++ K+ ++KA+
Sbjct: 385 LIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAM 444
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ I+G PD+ Y IV+D + R G + D + F+++ G+ P+ +YN + + L
Sbjct: 445 ALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGL 504
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
K LD F EM E+ D TY + F R +++L +M
Sbjct: 505 CKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEM 555
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 112/287 (39%), Gaps = 43/287 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC G + A+ L + + VA + D+ ++++IL D L
Sbjct: 393 NTLIHGLCHVGRLQDAIALFREM---------------VACGQIPDL-VTYRILLDYLCK 436
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+C+ + A A + + + L P+ I + +I ++ ++E A
Sbjct: 437 ------NCHLDKAMALLKAIEGSNL-----------DPD-IQIYTIVIDGMCRAGELEDA 478
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F ++ KP++ TYNI+ L + G +++ F M E D +YNT+
Sbjct: 479 RDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQG 538
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ---QI 239
+ + EM G D+ T T L+ G + DM Q+
Sbjct: 539 FLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQV 598
Query: 240 RPSIYVYRSLIDNLKKMGKV--DLAMTIFEEMNSSLSDLAGPKDFKR 284
+ +++ D++ +GKV DL EE+ + L+ P +
Sbjct: 599 KDTVFCKE---DDINALGKVISDLN-DWLEELEEDMIFLSTPSTYSE 641
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 138/268 (51%), Gaps = 7/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK ++ A+ L + + K I PN Y+ ++ + ++L D++
Sbjct: 874 NTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R ++ D +T A AF+ + +E+V+ + SI+ + +I F +
Sbjct: 933 --ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 990
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F+ + C PD++TYN ++ + RV + + F M + G+V + ++YN
Sbjct: 991 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ L + D+ F+EM G+ P+++TY L+D + G +E+++ +F +++ +
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ P+IY Y +I+ + K GKV+ +F
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLF 1138
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK V+ A + + K I PN Y ++ ++ + ++L D++
Sbjct: 297 NAIIDSLCKTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y+ AF+ + EE+V+++ I+ + +I +I+
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 415
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + C D+++YN +++ + RV D + F M + G+V + ++YNTL+
Sbjct: 416 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 475
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +D +F +M GI PD+ TY L+ G +E++L +F DM+++++
Sbjct: 476 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 535
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
I Y ++I + K GKV+ A ++F
Sbjct: 536 LDIVTYTTVIRGMCKTGKVEEAWSLF 561
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 137/273 (50%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ C+ VS AV L+ + + + P+ AYN ++ + +T ++ +F K++
Sbjct: 265 VNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 323
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + + + ++++ ++I + ++ AF K+ ++ +A
Sbjct: 324 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 383
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + + PD++TY+ +++ L R+++ F M G + D +SYNTL+N
Sbjct: 384 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 443
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +R++ + FREM + G+ + +TY LI F + G+++++ F+ M I P I
Sbjct: 444 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 503
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ Y L+ L G+++ A+ IFE+M DL
Sbjct: 504 WTYNILLGGLCDNGELEKALVIFEDMQKREMDL 536
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 101/185 (54%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ + ++++ + + N +I + +A+ + D + C+PDL+TY +V
Sbjct: 782 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 841
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
++ L + G + N M++ + P + YNT+++ L K + +D L F+EM GI
Sbjct: 842 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 901
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+P+++TY++LI G ++ RL +DM +++I P ++ + +LID K GK+ A
Sbjct: 902 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961
Query: 265 IFEEM 269
+++EM
Sbjct: 962 LYDEM 966
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 94/163 (57%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F Q+ AL I + L +PD +T +++ R RV+D ++ M E
Sbjct: 227 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 286
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD ++YN ++++L K +R++ +F+E+ GI+P+++TYTAL++ + +
Sbjct: 287 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ RL +DM +++I P++ Y +L+D K GKV A +FEEM
Sbjct: 347 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 91/168 (54%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + ++ F + ++ A+ + D + + KPD++ YN ++D L + RVND + F
Sbjct: 259 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 318
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ G+ P+ ++Y L+N L R +M + I P+++TY+AL+D+F + G
Sbjct: 319 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 378
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ E+ LF +M + I P I Y SLI+ L ++D A +F+ M S
Sbjct: 379 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 426
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 130/267 (48%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G S A RLL + ++ I P+ ++ ++ A + + + ++ +++ S
Sbjct: 912 ISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 970
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S Y++ F M D + E +V ++ N +I F K +++E+ +
Sbjct: 971 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGVVPDFISYNTLLNN 182
+F + + +TYNI++ L + G DM E F M GV P+ ++YNTLL+
Sbjct: 1031 EVFREMSQRGLVGNTVTYNILIQGLFQAGDC-DMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K +L+ ++ F + S ++P + TY +I+ + G +E+ LF ++ + ++P
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y ++I + G + A +F+EM
Sbjct: 1150 VVAYNTMISGFCRKGSKEEADALFKEM 1176
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL---- 59
+ LCK G+ A LL + ++ P YN ++ + +D + + K++
Sbjct: 842 VNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 900
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+V+ +L S C N+ R D ++LL ++++ + + +I AF K
Sbjct: 901 IRPNVVTYSSLIS-CLCNYGRW----SDASRLL---SDMIERKINPDVFTFSALIDAFVK 952
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A ++D + P ++TY+ +++ R+++ F M PD ++
Sbjct: 953 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 1012
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNTL+ K +R++ + FREM + G+ + +TY LI + G+ + + +F +M
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P+I Y +L+D L K GK++ AM +FE + S
Sbjct: 1073 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C+ + A+ +L + K + PN + +L + I + ++ + V+
Sbjct: 737 INCFCRRSQLPLALAVLGKMM-KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ + + + ++ + I+ +V ++ ++ K + A
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + ++ K +P ++ YN ++D L + ++D LN F M+ G+ P+ ++Y++L++ L
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R +M E I PD+ T++ALID+F + G + E+ +L+++M ++ I PSI
Sbjct: 916 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y SLI+ ++D A +FE M S
Sbjct: 976 VTYSSLINGFCMHDRLDEAKQMFEFMVS 1003
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC + S A RLL + K I PN Y+ +L A + + + ++ ++++ S
Sbjct: 335 VNGLCNSSRWSDAARLLSDMIKKKI-TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 393
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y++ + D + + +V ++ N +I F K++++E +
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 453
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + + +TYN ++ + G V+ F+ M G+ PD +YN LL L
Sbjct: 454 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
L+ L+ F +M + + D++TYT +I +TG +EE+ LF + + ++P I
Sbjct: 514 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 573
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +++ L G + ++ +M
Sbjct: 574 VTYTTMMSGLCTKGLLHEVEALYTKM 599
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 92/180 (51%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ + P + + +I F + Q+ AL + + L +P+++T + +L+
Sbjct: 719 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 778
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R+++ + M G P+ +++NTL++ L + + M G +PDL+TY
Sbjct: 779 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 838
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ + G+ + + L N M+Q ++ P + +Y ++ID L K +D A+ +F+EM +
Sbjct: 839 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 898
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 89/168 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ NR++ A K ++ + + + ++ L + DL T+NIV++ +V+ L+
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 246
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G PD ++ +L+N + R+ + +M E G KPD++ Y A+IDS +T
Sbjct: 247 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 306
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ F +++++ IRP++ Y +L++ L + A + +M
Sbjct: 307 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 354
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 2/192 (1%)
Query: 49 IDLSFQILKDLLVSSRTLSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVN 107
ID + Q+ DL+VS L+ Y F + E+ Q + + N
Sbjct: 414 IDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 472
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
+I F ++ ++KA F + PD+ TYNI+L L G + L F M++
Sbjct: 473 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ D ++Y T++ + K +++ F + G+KPD++TYT ++ G + E
Sbjct: 533 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 592
Query: 228 LRLFNDMKQQQI 239
L+ MKQ+ +
Sbjct: 593 EALYTKMKQEGL 604
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 72/134 (53%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P ++ +N +L + ++ + + +++ M+ G+ D ++N ++N ++ L L
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+M + G +PD +T +L++ F R + +++ L + M + +P I Y ++ID+L K
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305
Query: 256 MGKVDLAMTIFEEM 269
+V+ A F+E+
Sbjct: 306 TKRVNDAFDFFKEI 319
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 123/299 (41%), Gaps = 42/299 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I CKA V ++L + + + + YN ++ + D+D + + +
Sbjct: 437 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 496
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + + L+ E++ + I+ +I K+ ++E+
Sbjct: 497 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 556
Query: 122 ALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A +F + KGLK PD++TY ++ L G ++++ + MK+ G L
Sbjct: 557 AWSLFCSLSLKGLK--PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG----------L 604
Query: 180 LNNLRKIRRLDLCLI--YFREMGESGIKPDLL---------TYTALIDSF-GRTG----- 222
+ N + D+ L ++M G P LL +L+ +F G+T
Sbjct: 605 MKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYRE 664
Query: 223 ----------NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++++ LF +M + + PSI + L+ + KM K D+ +++ E+M +
Sbjct: 665 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 723
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 57/117 (48%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+++D + F M ++ P I ++ LL+ + K+ + D+ + +M GI + TY+
Sbjct: 675 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ F R + +L + M + P+I SL++ ++ A+ + ++M
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 791
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 1/173 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ ++ +I + +++++A + + C+PD +TYN+ +D L + RV+D
Sbjct: 4 SPD-MVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M E +P ++Y L++ L K RLD + +M E G P L TYT +ID
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ G +EE+ R+F DM RP +VY +LI L K GK + A +++E N+
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANA 175
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 5/242 (2%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN + + +D +FQ+LK + ++ YT + + + +E++V
Sbjct: 45 YNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMV 104
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + ++ +I +K+ ++E+A IF + G C+PD Y ++ L + G+
Sbjct: 105 EKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPE 164
Query: 156 DMLNEF----ASMKEAGVVPDFISYNTLLNNLRKIRR-LDLCLIYFREMGESGIKPDLLT 210
+ + A A VPD ++Y +L++ L K R L+ ++ E E G PD +T
Sbjct: 165 EAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVT 224
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
YT++ID + G +EE F++M+ + P Y +LID K + A ++ +M
Sbjct: 225 YTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML 284
Query: 271 SS 272
S
Sbjct: 285 QS 286
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 123/270 (45%), Gaps = 8/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G V +R++ + P+A Y ++ + I + ++ + +L S
Sbjct: 229 IDGLCKLGRVEEGCERFHEMRNRG-YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 287
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+S+ Y + + + +++ + ++ F + A+
Sbjct: 288 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 347
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + C+P+L++YNI++ L R G++ F + + + PD ++N L+ L
Sbjct: 348 ELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGL 407
Query: 184 RKIRRLDLC---LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+RLD + F M G P+L +Y+ L+D R G +E +L +F +M + +
Sbjct: 408 --CQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVA 465
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P + V+ +LI L G+VD A+ +F E+
Sbjct: 466 PDVVVFNTLIRWLCIAGRVDEALEVFRELE 495
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 76/138 (55%)
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
+ C PD++ + +V++ L R R+++ + AG PD+++YN ++ L K R+D
Sbjct: 1 MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
++M E P +TYTAL+D + G ++E++ + M ++ P++ Y +ID
Sbjct: 61 AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K G+V+ A IF +M
Sbjct: 121 GLSKAGRVEEARRIFVDM 138
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E V+ + N I K+ +++ A + + KC P +TY ++D L +
Sbjct: 30 LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 89
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GR+++ + M E G P +Y +++ L K R++ F +M +G +PD
Sbjct: 90 AGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 149
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIR----PSIYVYRSLIDNLKKMGKVDLAMTIF 266
YTALI ++G EE+ L+ + ++ P + Y SLID L K G++ A +F
Sbjct: 150 YTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVF 209
Query: 267 EE 268
++
Sbjct: 210 DD 211
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKAG + A ++ + F+P+A Y ++ + ++ + ++
Sbjct: 193 IDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 252
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F+ + +++Q + S + N I+ K+ ++ +A
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F ++ C ++TY+ ++D G V+ + F M + G P+ +SYN ++ L
Sbjct: 313 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 372
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF-GRTGNIEESLRLFNDMKQQQIRPS 242
+ +L YF ++ + + PD+ T+ A + R + + + LF M Q P+
Sbjct: 373 CRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPN 432
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ Y L+D + + G +++A+ IF EM S
Sbjct: 433 LHSYSILMDGICRAGGLEVALEIFREMVS 461
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 38/241 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C GNVSAAV L + + D+ PN +YN ++ + ++ + LL
Sbjct: 334 MDGFCSEGNVSAAVELFRRMLDRGC-EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLL--Q 390
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R L D YT A F+ + Q + + +
Sbjct: 391 RRLCPDVYTFNA--------------FLHGLCQ------------------RLDTVSDGV 418
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + P+L +Y+I++D + R G + L F M GV PD + +NTL+ L
Sbjct: 419 ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWL 478
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R+D L FRE+ E PD +Y +L+D R +EE+ L MK Q P
Sbjct: 479 CIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRH 537
Query: 244 Y 244
Y
Sbjct: 538 Y 538
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 7/244 (2%)
Query: 31 FLPN--AYNCVLVASAET-NDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQL 87
F+P +YN +L A T + ++ I K+++ S + + Y R F +
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA--LLIFDHIKGLKCKPDLITYNIVL 145
L F E+ + +++ N II A+ K R+I +A LL +KGL P+LI+YN+V+
Sbjct: 223 LFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLN--PNLISYNVVI 280
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ L R G++ + M + VPD +++NTL+N + L+ EM ++G+
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+++TYT LI+S + GN+ ++ + M+ + + P+ Y +LID + G + A I
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 266 FEEM 269
+EM
Sbjct: 401 MKEM 404
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK + A +LL+ + K + PN +YN V+ + + +IL+++
Sbjct: 242 NTIIDAYCKLRKIGEAFKLLRLMALKGLN-PNLISYNVVINGLCREGQMKETSEILEEM- 299
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S R D + + + Q L+ E+V+ +++ +I + K+
Sbjct: 300 -SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A+ D ++ P+ TY ++D + G + M E G P I+YN
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N + R++ +EM E G PD+++Y+ +I F R +E++ +L +M +
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P + Y SLI L K ++ +F+EM
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 34/257 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I +CKAGN++ A+ L +RD+ + PN RT
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLH-PNG----------------------------RT 380
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
YT F Q ++E+V+ +II N +I ++E A +
Sbjct: 381 -----YTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGL 435
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ PD+++Y+ ++ R + M G+ PD +Y++L+ L K
Sbjct: 436 LQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCK 495
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
RRL F+EM G+ PD +TYT+LI+++ G+++++LRL ++M Q+ P I
Sbjct: 496 QRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVT 555
Query: 246 YRSLIDNLKKMGKVDLA 262
Y LI+ K + A
Sbjct: 556 YNVLINGFNKQSRTKEA 572
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR-VNDMLNE 160
S V + ++ + A+ I KAL I + K P +++YN +LD + R + V
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M E+GV P+ +YN L+ L++ L +F EM +G P+++TY +ID++ +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I E+ +L M + + P++ Y +I+ L + G++ I EEM+
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC+ G + +L+ + K ++P+ +N ++ + + + +++
Sbjct: 277 NVVINGLCREGQMKETSEILEEM-SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMV 335
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + YT + + + + F++++ + +I F++ ++
Sbjct: 336 KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLK 395
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I + P +ITYN +++ +GR+ D M E G +PD +SY+T++
Sbjct: 396 QAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTII 455
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + L+ EM GI PD+ TY++LI + + E LF +M +
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLP 515
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI+ G +D A+ + +EM
Sbjct: 516 PDEVTYTSLINAYCIEGDLDKALRLHDEM 544
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 115/273 (42%), Gaps = 18/273 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G + A LLQ + ++ F+P+ +Y+ ++ +++ +FQ+ +++
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERG-FIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ + ++ +E++ + P + +I A+ ++
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLD 535
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL + D + PD++TYN++++ + R + + VP+ I+YNTL+
Sbjct: 536 KALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Query: 181 NNLRKIR-RLDLCLI--------------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+N + + L L+ M + G K + Y +I + GNIE
Sbjct: 596 DNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIE 655
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
++ L+ +M P +L +L GK
Sbjct: 656 KAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 21/295 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILK--- 57
N I +C A + A+ L +S+R K P+ +N ++ A + +D +F++LK
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGC-RPSRFTFNILIDAHCKRGKLDEAFRLLKRMT 282
Query: 58 ------DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
D++ S +S C + AR DD LL E++V+ +++ N +I
Sbjct: 283 DDGHVPDVVTYSTLISGLC--SIAR----VDDARHLL---EDMVKRQCKPTVVTQNTLIH 333
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
K+ +I++A + D + PD++TYN ++ R G+ + M G+ P
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 393
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ ++Y L++ L K RL F +M SG P+L TYTALI F G ++ L+LF
Sbjct: 394 NVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLF 453
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKA 286
+M I P VY +L L K G+ A+ I E SL A + R A
Sbjct: 454 GEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA 508
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC A + A L + + P YN ++ AS + ++ + ++K ++
Sbjct: 52 IHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH 111
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
Y + + L+ E+ ++ + N II + +I++A
Sbjct: 112 VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQ 171
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F ++ PD +Y I++D L + G++N+ F M ++G+ P ++YN +++ +
Sbjct: 172 VFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMC 231
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
LD L F+ M G +P T+ LID+ + G ++E+ RL M P +
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVV 291
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI L + +VD A + E+M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDM 316
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+Y ++ A+ ++ + + + LL S T S+ YT+ M + ++
Sbjct: 12 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ P S + N +I A K +E+A + + PD++TYN V+D L + RV
Sbjct: 72 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 131
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ L F M+ G P+ S+NT++ L + ++D F EM I PD +Y L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
ID + G + E+ +LF M I PS Y +I + +D A+ +F+ M S
Sbjct: 192 IDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 131/307 (42%), Gaps = 38/307 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK+ V A+ L + ++ PN ++N +++ + + ID + Q+ ++
Sbjct: 119 NTVMDGLCKSSRVEEALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + + ++ S + N +I + ++
Sbjct: 178 AKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLD 237
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL +F ++ C+P T+NI++D + G++++ M + G VPD ++Y+TL+
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Query: 181 NNLRKIRRLD---------------------------LC----LIYFRE----MGESGIK 205
+ L I R+D LC + RE M SG
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD++TY L+ R G E + L +DM + + P++ Y +L+ L K ++ A +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417
Query: 266 FEEMNSS 272
F +M SS
Sbjct: 418 FAQMKSS 424
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD +Y I++D L + G++ND N F + +GV P ++Y +L++ L D
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F +M G P +TY +ID+ + G +EE+ L M + P + Y +++D L K
Sbjct: 68 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 256 MGKVDLAMTIFEEM 269
+V+ A+ +F EM
Sbjct: 128 SSRVEEALLLFNEM 141
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 112/303 (36%), Gaps = 40/303 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK G + A RLL+ + D +P+ Y+ ++ +D + +L+D++
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDG-HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + ++ +V ++ N ++ ++ Q E+A
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + P+++TY ++ L + R+ + FA MK +G P+ +Y L+
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTAL----------------------------- 214
++D L F EM +GI PD + Y L
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW 500
Query: 215 --------IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+D G +E +L DM + P+ SL+ L K G+ A +
Sbjct: 501 GDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560
Query: 267 EEM 269
EE+
Sbjct: 561 EEI 563
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E V PD SY L++ L K +L+ F+++ SG+ P + YT+LI +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ LF DM ++ PS Y +ID K G ++ A + ++M
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 106
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M E + PD +Y LID + G + ++ LF + + PS Y SLI L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 259 VDLAMTIFEEMN 270
D A +F +MN
Sbjct: 61 FDDARELFADMN 72
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
MCN CK G V AA L+ + K I PN YN +++A ++DL+ I +
Sbjct: 451 MCNKIFLLFCKQGKVDAATSFLKMMEQKGI-EPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L ++ Y+ F D I ++ + ++ N II K Q
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 119 IEKALLIFDH-IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
KA + + IK + +YN ++D +VG + + + M E G P+ +++
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L+N K R+DL L EM +K DL Y ALID F + +++ + LF+++ +
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P++ VY SLI + +GK+D A+ ++++M
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSR-TLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ + + ++L++L+ R ++S Y + F+ D + E+
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ +++ +I F KS +++ AL + +K ++ K DL Y ++D + +
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
F+ + E G++P+ YN+L++ R + ++D + +++M GI DL TYT +
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ID + GNI + L++++ I P ++ L++ L K G+ A + EEM
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 128/269 (47%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL-RDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G S A +LQ+L ++K + +YN ++ + D D + + +++
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ + +T+ F ++ L E+ + + +I F K ++
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK 677
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + L P++ YN ++ +G+++ ++ + M G+ D +Y T++
Sbjct: 678 TAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++L + E+ + GI PD + + L++ + G ++ ++ +MK++ +
Sbjct: 738 DGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVT 797
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ +Y ++I + G ++ A + +EM
Sbjct: 798 PNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 111/235 (47%), Gaps = 2/235 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVS-SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
++ + A+ +T D+ ++ +L+++ S + YT+ AF+ + + + ++E+
Sbjct: 277 FSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V P S+I ++ + K ++ KAL +F+ ++ PD + ++++++ + +
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEM 396
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + MK + P + +T++ K + L F + ES I +
Sbjct: 397 EKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIF 456
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ F + G ++ + M+Q+ I P++ Y +++ +M +DLA +IF EM
Sbjct: 457 L-LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM 510
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/301 (16%), Positives = 132/301 (43%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP---NAYNCVLVASAETNDIDLSFQILKDLLVS 62
++ CK ++ A+ LL+ +R K + +P Y V+VA + +++ + +++ +++
Sbjct: 281 VQAACKTPDLVMALDLLREMRGK-LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+S T+ + ++ + L + + ++ + ++ F K+ ++EKA
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 123 LLIFDHIKGLKCKPDLITYNIVLD----------------------------------IL 148
+ + +K ++ P + + ++ +
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G+V+ + M++ G+ P+ + YN ++ +++ +DL F EM E G++P+
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY+ LID F + + + + + N M + +Y ++I+ L K+G+ A + +
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 269 M 269
+
Sbjct: 580 L 580
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F++ + Q +++ N ++ A + + ++ A IF + +P+ TY+I++D
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP--- 206
+ + + M + + + YNT++N L K+ + +EM ++ IK
Sbjct: 531 KNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA----KEMLQNLIKEKRY 586
Query: 207 --DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+Y ++ID F + G+ + ++ + +M + P++ + SLI+ K ++DLA+
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 265 IFEEMNS 271
+ EM S
Sbjct: 647 MTHEMKS 653
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
VN ++ + +S I++A I++ + + D +T +++ R + + + F +
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM 266
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNI 224
G PD + ++ + K L + L REM G+ G+ TYT++I +F + GN+
Sbjct: 267 SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM 326
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE++R+ ++M I S+ SL++ K ++ A+ +F M
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 26/223 (11%)
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ + Y + D+ T L+ + + E++ + R++ SR E L+F
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM-----SRGAEPDGLLF 277
Query: 127 DHIKGLKCK-PDLI--------------------TYNIVLDILGRVGRVNDMLNEFASMK 165
CK PDL+ TY V+ + G + + + M
Sbjct: 278 SLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV 337
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
G+ I+ +L+N K L L F M E G+ PD + ++ +++ F + +E
Sbjct: 338 GFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEME 397
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+++ + MK +I PS + ++I K + A+ IF +
Sbjct: 398 KAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND 440
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ A+ ++++++ A+ F + K P + N VL L R +++ + M
Sbjct: 173 NYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVL 232
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV D ++ L+ + R+ + + FR + G +PD L ++ + + +T ++
Sbjct: 233 IGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVM 292
Query: 227 SLRLFNDMKQQQIRP-SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L L +M+ + P S Y S+I K G ++ A+ + +EM
Sbjct: 293 ALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 96/252 (38%), Gaps = 42/252 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+ +AV + + + N PN + ++ ++N +DL+ ++ ++
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSE-NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y F +D E+ ++ ++ V N +I F +++
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 121 KALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVN---DMLNEF-------------- 161
A+ ++ + G+ C DL TY ++D L + G +N D+ +E
Sbjct: 713 AAIDLYKKMVNDGISC--DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 162 ------------------ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
MK+ V P+ + Y+T++ + L+ EM E G
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 204 IKPDLLTYTALI 215
I D + L+
Sbjct: 831 IVHDDTVFNLLV 842
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 99/168 (58%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ N +I K ++ +A +F +K + C PD++TYN ++D G+ G + ++
Sbjct: 199 NVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLV 258
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+++G D ++YN L+N K R++ YF EM G+ +++T++ +D+F +
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++E+++LF M+ + + P+ + Y SL+D K G++D A+ + +EM
Sbjct: 319 GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 366
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ V Q+ P + N I+ A++RQ +FD L P++ T+NIV+D L +
Sbjct: 157 LARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFD----LLPVPNVFTFNIVIDFLCK 212
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + + F MK G PD ++YN+L++ K L+ EM +SG D++T
Sbjct: 213 EGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVT 272
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ALI+ F + G +E++ F +MK+Q + ++ + + +D K G V AM +F +M
Sbjct: 273 YNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM 331
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 93/181 (51%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F+ SP+ ++ N +I + K +E+ + ++ C D++TYN +++
Sbjct: 222 LFVRMKAMGCSPD-VVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCF 280
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ GR+ + F MK GVV + ++++T ++ K + + F +M G+ P+
Sbjct: 281 SKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNE 340
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TYT+L+D + G +++++ L ++M Q + P++ Y ++D L K GKV A +
Sbjct: 341 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSL 400
Query: 269 M 269
M
Sbjct: 401 M 401
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 125/266 (46%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CKAG + A+ LL + + + +PN Y ++ + + + +L +
Sbjct: 347 VDGTCKAGRLDDAIVLLDEMVHQGL-VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT M ++ + L + ++ + + +I+ K +++++A
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAK 465
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + G +P+ + Y ++D L + G+ ++ + + ++G P+ ++Y L++ L
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGL 525
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + +F +M E G+ P++ YTALID F + G++ +++ L N+M + +
Sbjct: 526 CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDK 585
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLID K + A + +M
Sbjct: 586 VVYTSLIDGYMKQANLQDAFALKTKM 611
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 115/251 (45%), Gaps = 3/251 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN + +L + RL L N+F N L E + F +K +
Sbjct: 172 CNHILLRLARNRQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGC 231
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S ++ Y + + D ++ + E+ + ++ N +I F+K ++EK
Sbjct: 232 SPDVVT---YNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEK 288
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A F +K +++T++ +D + G V + + FA M+ G++P+ +Y +L++
Sbjct: 289 AYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVD 348
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K RLD ++ EM G+ P+++TYT ++D + G + E+ + + M++ ++
Sbjct: 349 GTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKA 408
Query: 242 SIYVYRSLIDN 252
+ +Y +LI
Sbjct: 409 NELLYTTLIHG 419
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V+ A +L SL ++ N Y ++ N+ + + +L +
Sbjct: 382 VDGLCKEGKVAEADNVL-SLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG 440
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L Y + + ++ + ++ I+ A K+ + +A+
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ I +P+++TY ++D L + G +++ ++ F M+E G+ P+ +Y L++
Sbjct: 501 ALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
KI L+ + EM + G+ D + YT+LID + + N++++ L M + ++ +
Sbjct: 561 CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDL 620
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y I M + A + EM
Sbjct: 621 YCYTCFISGFCNMNMMQEARGVLSEM 646
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 118/262 (45%), Gaps = 1/262 (0%)
Query: 14 NVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT 72
N A+ LL +++K + L + Y ++ + +D + +L + ++ YT
Sbjct: 425 NSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYT 484
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
A ++ + + +++ +++ +I K+ I +A+ F+ ++ L
Sbjct: 485 TIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMREL 544
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
P++ Y ++D ++G +N ++ M + G+ D + Y +L++ K L
Sbjct: 545 GLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA 604
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+M ESG++ DL YT I F ++E+ + ++M I P VY LI
Sbjct: 605 FALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRK 664
Query: 253 LKKMGKVDLAMTIFEEMNSSLS 274
+K+G ++ A ++ EM S LS
Sbjct: 665 YQKLGNMEEASSLQNEMESVLS 686
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N ++ L K +V A + +D + P+ +N ++ + +D + + + ++
Sbjct: 227 NTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEH 286
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YT+ A+ D ++ + E+ + P +++ ++ A K ++I KA
Sbjct: 287 GFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKA 346
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L +++ +KG C PD Y+ ++ IL + GR+ D + F M + G +PD ++YNT+++
Sbjct: 347 LEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISA 406
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ + L +M ES KPDL TY+ L+ R ++ L N M + I
Sbjct: 407 ACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLE 466
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y L+ L K GK++ A FEEM S
Sbjct: 467 VGTYSLLVHGLCKSGKLEHACLFFEEMVS 495
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+EE+ ++ S+ + +++ A++ + + A+ F ++ K D + N ++D L
Sbjct: 175 LVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALV 234
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ V + F K++ ++ + ++N L++ K R++D L EM E G PD++
Sbjct: 235 KENSVEHANDVFVEFKDS-ILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVI 293
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+YT++++++ R + + + N+M+++ P++ Y ++ L K ++ A+ ++E+M
Sbjct: 294 SYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKM 353
Query: 270 NSS 272
S
Sbjct: 354 KGS 356
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 133/268 (49%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLV 61
N I+ LCK V AV + + L K++ C LV + + ++ +++ ++L
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ S ++ + L ++ VV ++ V N +I + K R+ +
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A L+FD + + +P+ +TY+I++D+ R G+++ L+ M + G+ YN+L+N
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K + + EM ++P ++TYT+L+ + G I ++LRL+++M + I P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
SIY + +L+ L + G + A+ +F EM
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 3/276 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK A L + K PN Y+ ++ +D + L +++
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRM-GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ LS Y + D + F+ E++ +++ ++ + +I
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL ++ + G P + T+ +L L R G + D + F M E V P+ ++YN ++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + +EM E GI PD +Y LI TG E+ + + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ Y L+ + GK++ A+++ +EM DL
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 7/275 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD----KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
+E L K G + A+ L++ + D N+F+ NA L + ++ +L F + + +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ Y+ F L F+ E+V S+ N +I K I
Sbjct: 399 RPNDVT---YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + K +P ++TY ++ G++N L + M G+ P ++ TLL+
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + + + F EM E +KP+ +TY +I+ + G++ ++ +M ++ I P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
Y YR LI L G+ A + ++ +L
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 112/266 (42%), Gaps = 1/266 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ C+ G + A+ L + D + L YN ++ + DI + + +++
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT+ + + L E+ SI ++ ++ I A+
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ + KP+ +TYN++++ G ++ M E G+VPD SY L++ L
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++ + + + + + YT L+ F R G +EE+L + +M Q+ + +
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y LID K L + +EM+
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMH 674
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 122/272 (44%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
G + C+ G + A+ + Q + + + L Y ++ S + D L F +LK++
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM-- 673
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
R L D YT+ A T D + + ++ + + +I K+ +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN--EFASMKEAGVVPDFISYN 177
+A ++ ++ + P+ +TY LDIL + G V DM E + G++ + +YN
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEV-DMQKAVELHNAILKGLLANTATYN 791
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+ + R++ M G+ PD +TYT +I+ R ++++++ L+N M ++
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
IRP Y +LI G++ A + EM
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 3/263 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSSRTLS 67
C G ++ A+RL + K I P+ Y + S I + ++ ++ + +
Sbjct: 483 CSKGKINKALRLYHEMTGKGI-APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + D ++ F++E+ + +I + Q +A + D
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ C+ + I Y +L R G++ + L+ M + GV D + Y L++ K +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
L +EM + G+KPD + YT++ID+ +TG+ +E+ +++ M + P+ Y
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 248 SLIDNLKKMGKVDLAMTIFEEMN 270
++I+ L K G V+ A + +M
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQ 744
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 88/178 (49%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++V + + + +I + + + + +A + H++ C +++ YN+++D L +
Sbjct: 217 DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+V + + + + PD ++Y TL+ L K++ ++ L EM P +
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L++ + G IEE+L L + + P+++VY +LID+L K K A +F+ M
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 87/179 (48%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
+L+F + +++ + ++ ++ K R A+ +F+ + + +PD+ Y V+
Sbjct: 176 VLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIR 235
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L + ++ A M+ G + + YN L++ L K +++ + +++ +KP
Sbjct: 236 SLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKP 295
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D++TY L+ + E L + ++M + PS SL++ L+K GK++ A+ +
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR-LDLCLIYFREMGESGIKPDLLTY 211
+ +D+ N S E + S++ L+ + + RR LD L++ + + + P++ T
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+AL+ + + ++ LFNDM IRP +Y+Y +I +L ++ + A + M +
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 272 SLSDL 276
+ D+
Sbjct: 256 TGCDV 260
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 137/276 (49%), Gaps = 9/276 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+E LCKAG LLQ + + F P+ YN +L ++ +D + ++++ ++ S
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRG-FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + F + + I+ + + P +I N +I + +++ A
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVN-DMLNEFAS-----MKEAGVVPDFISYN 177
+ + +C PD+ITY+ ++D L + RV+ D E A MK+ G P+ +Y
Sbjct: 297 ALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA 356
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++ L + R+ L R M +S + PDL +++ +I S ++ +++ + ++F M ++
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ +P+ Y +LID L K G+VD A+ +FE M S
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF 452
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVL------------------VASAET 46
I LCKAG + A LL +RD+ I A +N V+ VA +
Sbjct: 37 IHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKC 96
Query: 47 NDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
++F IL D LV S + AF IF +++
Sbjct: 97 TPDIITFNILVDALVKSGRVEE--------AF---------QIFESMHTSSQCLPNVVTY 139
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K ++++A+ + D + C P++ITY+++++ L + GR + M
Sbjct: 140 TTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTR 199
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD I YNTLLN L K RRLD L + M SG P ++TY +L++ F R+ ++
Sbjct: 200 RGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDR 259
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ RL M ++ P + Y ++I L + ++D A + ++M
Sbjct: 260 AFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
L +AG AV+L + R +PN Y ++ + +D ++++L ++
Sbjct: 8 LVRAGQHGQAVQLFREER----CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ R L + + V II N ++ A KS ++E+A IF
Sbjct: 64 GVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123
Query: 127 DHIK-GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + +C P+++TY V++ L + G+++ + M E G P+ I+Y+ L+ L K
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCK 183
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
R D +EM G +PD++ Y L++ ++ ++E+L L M + P++
Sbjct: 184 AGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMN 270
Y SL++ + +VD A + + M+
Sbjct: 244 YNSLMELFCRSKQVDRAFRLIQVMS 268
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 122/272 (44%), Gaps = 8/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L K+G V A ++ +S+ + LPN Y V+ + +D + ++L + +
Sbjct: 107 VDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETG 166
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ + ++E+ + +I+ N ++ KSR++++AL
Sbjct: 167 CCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEAL 226
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C P ++TYN ++++ R +V+ M E G PD I+YNT++ L
Sbjct: 227 ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI------EESLRLFNDMKQQ 237
+ RLD ++M + PD++TY+ +ID + + E + + MKQ
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y +I+ L + K A+ + M
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 120/261 (45%), Gaps = 4/261 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I LCKAG A+ +++ P+ +N ++ A ++ ++ +FQI + +
Sbjct: 69 NGVIRGLCKAGRFGDALGYFKTVAGTKC-TPDIITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 61 VSSRTLSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
SS+ L + YT + + ++ + + ++I + ++ K+ +
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+K + + +PD+I YN +L+ L + R+++ L M +G P ++YN+L
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + +++D + M E G PD++ Y +I R ++++ L M +
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307
Query: 240 RPSIYVYRSLIDNLKKMGKVD 260
P + Y ++ID L K +VD
Sbjct: 308 VPDVITYSTIIDGLCKDWRVD 328
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 125/280 (44%), Gaps = 16/280 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILK--- 57
N +E C++ V A RL+Q + ++ P+ YN V+ +D + +LK
Sbjct: 245 NSLMELFCRSKQVDRAFRLIQVMSERGC-PPDVINYNTVIAGLCRDARLDDAQALLKQMV 303
Query: 58 ------DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
D++ S + C A + ++L E + Q P + +I
Sbjct: 304 AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL---EMMKQTGCPPNAGTYAVVIE 360
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
++R+ ++AL + + + PDL ++++V+ L + ++ F M E P
Sbjct: 361 GLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ ++Y L++ L K +D + F M ES +P + TY +++D G IEE++R+
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMV 479
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ P Y +LI L ++ V+ A +F+ + +
Sbjct: 480 EGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEA 519
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N L++L R G+ + F +E VP+ +Y +L++ L K +LD EM +
Sbjct: 2 NCALNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
GI P + + +I + G ++L F + + P I + L+D L K G+V+
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 262 AMTIFEEMNSS 272
A IFE M++S
Sbjct: 119 AFQIFESMHTS 129
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + KS ++ A IF + +CKP+ + Y ++D L + G V+ + F M E+
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES- 451
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P +YN++L+ L + R++ + M PD +Y ALI R +EE+
Sbjct: 452 FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAY 511
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKK 255
LF ++ + + VY L++ L K
Sbjct: 512 ELFQAVEAKGFAMEVGVYNVLVNELCK 538
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 104/240 (43%), Gaps = 46/240 (19%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
IE LC+A A+ LL+ + D + +P+ +++ V+ + +++D+D +++I ++S
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEV-VPDLSSFSMVIGSLCKSHDLDAAYKIFG--MMSE 415
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R +C N + +I +K +++KA+
Sbjct: 416 R----ECKPN-----------------------------PVAYAALIDGLSKGGEVDKAV 442
Query: 124 LIFD-HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F+ ++ + P + TYN VLD L VGR+ + + M PD SY L+
Sbjct: 443 RVFELMVESFR--PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-----KQQ 237
L ++ ++ F+ + G ++ Y L++ + + ++ + N + KQQ
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYKQQ 560
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 21/295 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILK--- 57
N I +C A + A+ L +S+R K P+ +N ++ A + +D +F++LK
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGC-RPSRFTFNILIDAHCKRGKMDEAFRLLKRMT 282
Query: 58 ------DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
D++ S +S C + AR DD LL E++V+ +++ N +I
Sbjct: 283 DDGHVPDVVTYSTLISGLC--SIAR----VDDARHLL---EDMVKRQCKPTVVTQNTLIH 333
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
K+ +I++A + D + PD++TYN ++ R G+ + M G+ P
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 393
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ ++Y L++ L K RL F +M SG P+L TYTALI F G ++ L+LF
Sbjct: 394 NVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLF 453
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKA 286
+M I P VY +L L K G+ A+ I E SL A + R A
Sbjct: 454 GEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA 508
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC A + A L + + P YN ++ AS + ++ + ++K ++
Sbjct: 52 IHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGH 111
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
Y + + L+ E+ ++ + N II + +I++A
Sbjct: 112 VPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQ 171
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F ++ PD +Y I++D L + G++N+ F M ++G+ P ++YN +++ +
Sbjct: 172 VFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMC 231
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
LD L F+ M G +P T+ LID+ + G ++E+ RL M P +
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVV 291
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI L + +VD A + E+M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDM 316
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+Y ++ A+ ++ + + + LL S T S+ YT+ M + ++
Sbjct: 12 SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ P S + N II A K +E+A + + PD++TYN V+D L + GRV
Sbjct: 72 NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRV 131
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ L F M+ G P+ S+NT++ L + ++D F EM I PD +Y L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
ID + G + E+ +LF M I PS Y +I + +D A+ +F+ M S
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 38/307 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK+G V A+ L + ++ PN ++N +++ + + ID + Q+ ++
Sbjct: 119 NTVMDGLCKSGRVEEALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + ++ S + N +I + ++
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLD 237
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL +F ++ C+P T+NI++D + G++++ M + G VPD ++Y+TL+
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Query: 181 NNLRKIRRLD---------------------------LC----LIYFRE----MGESGIK 205
+ L I R+D LC + RE M SG
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD++TY L+ R G E + L +DM + + P++ Y +L+ L K ++ A +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417
Query: 266 FEEMNSS 272
F +M SS
Sbjct: 418 FAQMKSS 424
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD +Y I++D L + G++ND + F + +GV P ++Y +L++ L D
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F +M G P +TY +ID+ + G +EE+ L M + P + Y +++D L K
Sbjct: 68 FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 256 MGKVDLAMTIFEEMN 270
G+V+ A+ +F EM
Sbjct: 128 SGRVEEALLLFNEME 142
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 112/303 (36%), Gaps = 40/303 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK G + A RLL+ + D +P+ Y+ ++ +D + +L+D++
Sbjct: 262 IDAHCKRGKMDEAFRLLKRMTDDG-HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + ++ +V ++ N ++ ++ Q E+A
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + P+++TY ++ L + R+ + FA MK +G P+ +Y L+
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTAL----------------------------- 214
++D L F EM +GI PD + Y L
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW 500
Query: 215 --------IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+D G +E +L DM + P+ SL+ L K G+ A +
Sbjct: 501 GDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560
Query: 267 EEM 269
EE+
Sbjct: 561 EEI 563
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E V PD SY L++ L K +L+ F+++ SG+ P + YT+LI +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ LF DM ++ PS Y +ID K G ++ A + ++M
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKM 106
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M E + PD +Y LID + G + ++ LF + + PS Y SLI L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 259 VDLAMTIFEEMN 270
D A +F +MN
Sbjct: 61 FDDARELFADMN 72
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 137/276 (49%), Gaps = 9/276 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+E LCKAG LLQ + + F P+ YN +L ++ +D + ++++ ++ S
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRG-FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + F + + I+ + + P +I N +I + +++ A
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVN-DMLNEFAS-----MKEAGVVPDFISYN 177
+ + +C PD+ITY+ ++D L + RV+ D E A MK+ G P+ +Y
Sbjct: 297 ALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYA 356
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++ L + R+ L R M +S + PDL +++ +I S ++ +++ + ++F M ++
Sbjct: 357 VVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ +P+ Y +LID L K G+VD A+ +FE M S
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF 452
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVL------------------VASAET 46
I LCKAG + A LL +RD+ I A +N V+ VA +
Sbjct: 37 IHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKC 96
Query: 47 NDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
++F IL D LV S + AF IF +++
Sbjct: 97 TPDIITFNILVDALVKSGRVEE--------AF---------QIFESMHTSSQCLPNVVTY 139
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K ++++A+ + D + C P++ITY+++++ L + GR + M
Sbjct: 140 TTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTR 199
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD I YNTLLN L K RRLD L + M SG P ++TY +L++ F R+ ++
Sbjct: 200 RGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDR 259
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ RL M ++ P + Y ++I L + ++D A + ++M
Sbjct: 260 AFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 122/272 (44%), Gaps = 8/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L K+G V A ++ +S+ + LPN Y V+ + +D + ++L + +
Sbjct: 107 VDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETG 166
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ + ++E+ + +I+ N ++ KSR++++AL
Sbjct: 167 CCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEAL 226
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C P ++TYN ++++ R +V+ M E G PD I+YNT++ L
Sbjct: 227 ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI------EESLRLFNDMKQQ 237
+ RLD ++M + PD++TY+ +ID + + E + + MKQ
Sbjct: 287 CRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y +I+ L + K A+ + M
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 121/261 (46%), Gaps = 4/261 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I+ LCKAG A+ +++ P+ +N ++ A ++ ++ +FQI + +
Sbjct: 69 NGVIKGLCKAGRFGDALGYFKTVAGTKC-TPDIITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 61 VSSRTLSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
SS+ L + YT + + ++ + + ++I + ++ K+ +
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+K + + +PD+I YN +L+ L + R+++ L M +G P ++YN+L
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + +++D + M E G PD++ Y +I R ++++ L M +
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307
Query: 240 RPSIYVYRSLIDNLKKMGKVD 260
P + Y ++ID L K +VD
Sbjct: 308 VPDVITYSTIIDGLCKDWRVD 328
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 125/280 (44%), Gaps = 16/280 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILK--- 57
N +E C++ V A RL+Q + ++ P+ YN V+ +D + +LK
Sbjct: 245 NSLMELFCRSKQVDRAFRLIQVMSERGC-PPDVINYNTVIAGLCRDARLDDAQALLKQMV 303
Query: 58 ------DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
D++ S + C A + ++L E + Q P + +I
Sbjct: 304 AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL---EMMKQTGCPPNAGTYAVVIE 360
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
++R+ ++AL + + + PDL ++++V+ L + ++ F M E P
Sbjct: 361 GLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKP 420
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ ++Y L++ L K +D + F M ES +P + TY +++D G IEE++R+
Sbjct: 421 NPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMV 479
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ P Y +LI L ++ V+ A +F+ + +
Sbjct: 480 EGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEA 519
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N L++L R G+ + F +E VP+ +Y +L++ L K +LD EM +
Sbjct: 2 NCALNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
GI P + + +I + G ++L F + + P I + L+D L K G+V+
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 262 AMTIFEEMNSS 272
A IFE M++S
Sbjct: 119 AFQIFESMHTS 129
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + KS ++ A IF + +CKP+ + Y ++D L + G V+ + F M E+
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES- 451
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P +YN++L+ L + R++ + M PD +Y ALI R +EE+
Sbjct: 452 FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAY 511
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKK 255
LF ++ + + VY L++ L K
Sbjct: 512 ELFQAVEAKGFAMEVGVYNVLVNELCK 538
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 104/240 (43%), Gaps = 46/240 (19%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
IE LC+A A+ LL+ + D + +P+ +++ V+ + +++D+D +++I ++S
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEV-VPDLSSFSMVIGSLCKSHDLDAAYKIFG--MMSE 415
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R +C N + +I +K +++KA+
Sbjct: 416 R----ECKPN-----------------------------PVAYAALIDGLSKGGEVDKAV 442
Query: 124 LIFD-HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F+ ++ + P + TYN VLD L VGR+ + + M PD SY L+
Sbjct: 443 RVFELMVESFR--PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-----KQQ 237
L ++ ++ F+ + G ++ Y L++ + + ++ + N + KQQ
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYKQQ 560
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
+++LCKA + A ++ +S + C L+ + +D ++++ + +L +
Sbjct: 430 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 489
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT+ R F + +E+++ + ++N + K+ ++EK +
Sbjct: 490 NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 549
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF+ I+ PD+ +Y+I++ L + G+ + N F +MK+ G D +YN +++
Sbjct: 550 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 609
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++ EM E ++P + TY A++D + ++E+ LF + K + I ++
Sbjct: 610 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLID K+G++D A I EEM
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEM 694
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 126/264 (47%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L KAG + +++ + L AYN V+ ++ + +++IL+++
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 629
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y D + + EE ++++ + +I F K +I++A L
Sbjct: 630 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 689
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I + + P++ T+N +LD L + +N+ L F SMKE P+ +Y+ L+N L
Sbjct: 690 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 749
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++++ + +++++M + G+ P+++TYT +I + GNI ++ LF K P
Sbjct: 750 RVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 809
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEE 268
+ +LI+ + + A +FEE
Sbjct: 810 SFNALIEGMSNANRAMEAYQVFEE 833
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 5/279 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ + KAG V + + +R FLP+ +Y+ ++ + + I +
Sbjct: 532 NTYMDCVFKAGEVEKGRMIFEDIRSYG-FLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + Y F + + +EE+ + ++ I+ AK +++
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 650
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++F+ K + +++ Y+ ++D G+VGR+++ M + G+ P+ ++N+LL
Sbjct: 651 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ L+ F+ M E P+ TY+ LI+ R ++ + DM++Q +
Sbjct: 711 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 770
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE--EMNSSLSDLA 277
P++ Y ++I L K+G + A ++FE + N + D A
Sbjct: 771 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 809
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 127/254 (50%), Gaps = 1/254 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N ++ CK+G V A +L+ +++K + A Y ++ A+ + +D ++ + ++
Sbjct: 602 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS 661
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L+ Y++ F + + +EE+++ ++ N ++ A K+ +I +
Sbjct: 662 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 721
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL+ F +K +KC P+ TY+I+++ L RV + N + M++ G+VP+ ++Y T+++
Sbjct: 722 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMIS 781
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K+ + F +G PD ++ ALI+ E+ ++F + + + R
Sbjct: 782 GLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRI 841
Query: 242 SIYVYRSLIDNLKK 255
+I SL+D L K
Sbjct: 842 NIKSCISLLDALNK 855
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 4/261 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
KAGNV A + L+ + + P+ +Y ++ + + + ++ + +
Sbjct: 261 KAGNVDMAWKFFHELKAQGL-KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCA 319
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + +E + + S++ N I+ K R++++AL +F+
Sbjct: 320 YAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV 379
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+K +P+ TYNI++D+L GRV + M+ A + P+ ++ N +++ L K R+
Sbjct: 380 MKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 438
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L+ F + G PD +TY +LID G+ G ++E+ RLF M + VY S
Sbjct: 439 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 498
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
LI N G+ + IF+E+
Sbjct: 499 LIRNFFIHGRKEDGHKIFKEL 519
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 9/261 (3%)
Query: 14 NVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-----ETNDIDLSFQILKDLLVSSRTLSS 68
+++A ++L+ + LPN C +A+A +D L+ +++ L +
Sbjct: 124 DLAALEKVLEEMAVLGYGLPNQ-ACAHLAAALVRARRLDDAVLAVAVMRRLKFRP---AF 179
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
YT A + L + ++ ++ + + ++ A A+ Q+ AL + D
Sbjct: 180 SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDE 239
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+KG +PD++ YN+ +D G+ G V+ F +K G+ PD +SY +++ L K R
Sbjct: 240 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 299
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L F +M P Y +I +G G E++ +L ++++ PS+ + S
Sbjct: 300 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 359
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
++ L K KVD A+++FE M
Sbjct: 360 ILTCLGKKRKVDEALSLFEVM 380
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 3/255 (1%)
Query: 18 AVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARA 77
AV +++ L+ + F +AY ++ A AE + + ++L+ + + +T RA
Sbjct: 166 AVAVMRRLKFRPAF--SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRA 223
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
L ++EV I++ N I F K+ ++ A F +K KPD
Sbjct: 224 LAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPD 283
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
++Y ++ +L + GR+ + FA M+ VP +YNT++ R +
Sbjct: 284 DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 343
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+ E G P ++++ +++ G+ ++E+L LF MK+ P+ Y +ID L G
Sbjct: 344 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGG 402
Query: 258 KVDLAMTIFEEMNSS 272
+V+ A I +EM +
Sbjct: 403 RVEEAYRILDEMEHA 417
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR-DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCKAG + A L + ++++ AYN +++ + ++++L+ L
Sbjct: 291 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 350
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S + + + L E + + A P S N II ++E+A
Sbjct: 351 IPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS-TYNIIIDMLCLGGRVEEAYR 409
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I D ++ P+L+T NI++D L + ++ + F S + G PD ++Y +L++ L
Sbjct: 410 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 469
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++D F +M ++G + + YT+LI +F G E+ ++F ++ ++ +P +
Sbjct: 470 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLT 529
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + +D + K G+V+ IFE++ S
Sbjct: 530 LLNTYMDCVFKAGEVEKGRMIFEDIRS 556
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A ++R+++ A+L ++ LK +P Y +++ L R L M+E G
Sbjct: 153 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 212
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ TL+ L + ++ L E+ S ++PD++ Y ID FG+ GN++ + + F
Sbjct: 213 GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFF 272
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+++K Q ++P Y S+I L K G++ A +F +M + S
Sbjct: 273 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 315
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 133/270 (49%), Gaps = 7/270 (2%)
Query: 6 IEKLCKA-GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
I LC+ VS A++L S+ K + P YN ++ + + ++ +F++ L+
Sbjct: 154 ISGLCRELRGVSEALKLFGSVL-KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKH 212
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ YT F L+ ++++ + ++ N +I K +++++A
Sbjct: 213 GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 272
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
++ ++ C P+ I++N ++ R G+ + F M + GV P ++YN L++
Sbjct: 273 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 332
Query: 183 LRKIR---RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L K R R+ + F M E G PD++TY+ALID G+ G ++++ RL M+ +
Sbjct: 333 LCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGC 392
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++Y Y SLI L + KVD A+ +F M
Sbjct: 393 IPNVYTYNSLISGLCGLEKVDEALELFVAM 422
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 10/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CKA + A R+LQ + +N+ +P+ YN ++ + +D + ++ D
Sbjct: 84 NALINGFCKADKLDEAQRILQRMVSENL-VPDVVTYNSLVNGLCKNGRVDEARMLIVDKG 142
Query: 61 VSSRTLS-SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S ++ S + R + +L F + Q PE + N +I K ++
Sbjct: 143 FSPNVITYSTLISGLCRELRGVSEALKL--FGSVLKQGYEPE-VPTYNILIDGLLKEDRV 199
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A +F + +PD ITY + +D L + GRV D L M E G VPD +S+N +
Sbjct: 200 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 259
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L K +R+D + M G P+ +++ LI R G ++++ F +M ++ +
Sbjct: 260 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 319
Query: 240 RPSIYVYRSLIDNL---KKMGKVDLAMTIFEEM 269
+P++ Y L+D L ++ G++ A+T+F+ M
Sbjct: 320 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAM 352
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 129/273 (47%), Gaps = 9/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC G +S A L + + K + P+ YN +L + ++D + +I +
Sbjct: 14 NALLSGLCNGGRMSDAQALYERMI-KAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAV 72
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y F D + ++ +V ++ N ++ K+ +++
Sbjct: 73 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD 132
Query: 121 KA-LLIFDHIKGLKCKPDLITYNIVLDILGRVGR-VNDMLNEFASMKEAGVVPDFISYNT 178
+A +LI D KG P++ITY+ ++ L R R V++ L F S+ + G P+ +YN
Sbjct: 133 EARMLIVD--KGFS--PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNI 188
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ L K R++ F + + G++PD +TYT ID + G +E++L + DM ++
Sbjct: 189 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + + ++I+ L K +VD A + M +
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 281
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ ITYN +L L GR++D + M +AG PD ++YNTLL+ K+ LD L
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F + G PD++TY ALI+ F + ++E+ R+ M + + P + Y SL++ L K
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 256 MGKVDLA 262
G+VD A
Sbjct: 128 NGRVDEA 134
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
+I+ LCKAG V A+ +L+ + +K +P+ ++N V+ + +D + +L +
Sbjct: 224 FIDGLCKAGRVEDALLMLKDMDEKGC-VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 282
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ---I 119
+ ++ + + + +E+++ +++ N ++ K+RQ I
Sbjct: 283 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 342
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A+ +FD + PD++TY+ ++D LG+ G+++D +M+ G +P+ +YN+L
Sbjct: 343 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 402
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
++ L + ++D L F M E G PD +TY +I +
Sbjct: 403 ISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I N ++ ++ A +++ + PD++TYN +L +VG +++ L F
Sbjct: 11 ITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDG 70
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ G VPD ++YN L+N K +LD + M + PD++TY +L++ + G
Sbjct: 71 AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGR 130
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIF 266
++E+ L D + P++ Y +LI L +++ V A+ +F
Sbjct: 131 VDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLF 171
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M++ G P+ I+YN LL+ L R+ + M ++G PD++TY L+ F + G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++E+L++F+ ++ P + Y +LI+ K K+D A I + M S
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS 108
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 7/244 (2%)
Query: 31 FLPN--AYNCVLVASAET-NDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQL 87
F+P +YN +L A T + ++ I K+++ S + + Y R F +
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA--LLIFDHIKGLKCKPDLITYNIVL 145
L F E+ + +++ N II A+ K R+I +A LL +KGL P+LI+YN+V+
Sbjct: 223 LXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLN--PNLISYNVVI 280
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ L R G++ + M + VPD +++NTL+N + L+ EM ++G+
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+++TYT LI+S + GN+ ++ + M+ + + P+ Y +LID + G + A I
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 266 FEEM 269
+EM
Sbjct: 401 MKEM 404
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK + A +LL+ + K + PN +YN V+ + + +IL+++
Sbjct: 242 NTIIDAYCKLRKIGEAFKLLRLMALKGLN-PNLISYNVVINGLCREGQMKETSEILEEM- 299
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S R D + + + Q L+ E+V+ +++ +I + K+
Sbjct: 300 -SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A+ D ++ P+ TY ++D + G + M E G P I+YN
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N + R++ +EM E G PD+++Y+ +I F R +E++ +L +M +
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P + Y SLI L K ++ +F+EM
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 34/257 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I +CKAGN++ A+ L +RD+ + PN RT
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLH-PNG----------------------------RT 380
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
YT F Q ++E+V+ +II N +I ++E A +
Sbjct: 381 -----YTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGL 435
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ PD+++Y+ ++ R + M G+ PD +Y++L+ L K
Sbjct: 436 LQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCK 495
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
RRL F+EM G+ PD +TYT+LI+++ G+++++LRL ++M Q+ P I
Sbjct: 496 QRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVT 555
Query: 246 YRSLIDNLKKMGKVDLA 262
Y LI+ K + A
Sbjct: 556 YNVLINGFNKQSRTKEA 572
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR-VNDMLNE 160
S V + ++ + A+ I KAL I + K P +++YN +LD + R + V
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M E+GV P+ +YN L+ L++ L +F EM +G P+++TY +ID++ +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I E+ +L M + + P++ Y +I+ L + G++ I EEM+
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC+ G + +L+ + K ++P+ +N ++ + + + +++
Sbjct: 277 NVVINGLCREGQMKETSEILEEM-SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMV 335
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + YT + + + + F++++ + +I F++ ++
Sbjct: 336 KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLK 395
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I + P +ITYN +++ +GR+ D M E G +PD +SY+T++
Sbjct: 396 QAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTII 455
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + L+ EM GI PD+ TY++LI + + E LF +M +
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLP 515
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI+ G +D A+ + +EM
Sbjct: 516 PDEVTYTSLINAYCIEGDLDKALRLHDEM 544
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 115/273 (42%), Gaps = 18/273 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G + A LLQ + ++ F+P+ +Y+ ++ +++ +FQ+ +++
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERG-FIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ + ++ +E++ + P + +I A+ ++
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLD 535
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL + D + PD++TYN++++ + R + + VP+ I+YNTL+
Sbjct: 536 KALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Query: 181 NNLRKIR-RLDLCLI--------------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+N + + L L+ M + G K + Y +I + GNIE
Sbjct: 596 DNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIE 655
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
++ L+ +M P +L +L GK
Sbjct: 656 KAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G A RLL+ L ++ P+ YN ++ + + + + + +++V
Sbjct: 169 INGLCKTGETKAVARLLRKLEGHSV-KPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 227
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT F + + + E+ ++ N +I A +K ++++A
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAK 287
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + KPD+ TYN ++D V V F SM + GV PD Y ++N L
Sbjct: 288 ILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGL 347
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + +D + F EM + PD++TY +LID + ++E ++ L MK+Q I+P +
Sbjct: 348 CKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDV 407
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y L+D L K G+++ A IF+ +
Sbjct: 408 YSYTILLDGLCKSGRLEDAKEIFQRL 433
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I +N +I +I+KAL D + + D ++Y +++ L + G +
Sbjct: 128 ITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRK 187
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++ V PD + YNT++N+L K + L D C +Y EM GI PD++TYT LI F G
Sbjct: 188 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY-SEMIVKGISPDVVTYTTLIHGFCIMG 246
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E+ L N+MK + I P++ + LID L K GK+ A + M
Sbjct: 247 HLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
I L+F + ++L ++ + + + L F +++V +
Sbjct: 108 ITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGT 167
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K+ + + + ++G KPD++ YN +++ L + + D + ++ M G
Sbjct: 168 LINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 227
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD ++Y TL++ + L EM I P++ T+ LID+ + G ++E+
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAK 287
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L M + I+P ++ Y SLID + +V A +F M
Sbjct: 288 ILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSM 328
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C G++ A LL ++ KNI PN +N ++ A ++ + + +L ++ +
Sbjct: 239 IHGFCIMGHLKEAFSLLNEMKLKNIN-PNVCTFNILIDALSKEGKMKEAKILLAVMMKAC 297
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + + D+ + Q + +I K++ +++A+
Sbjct: 298 IKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAM 357
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K PD++TYN ++D L + + + MKE G+ PD SY LL+ L
Sbjct: 358 SLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGL 417
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL+ F+ + G ++ YT LI+ + G +E+L L + M+ + P
Sbjct: 418 CKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDA 477
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +I L + + D A I EM
Sbjct: 478 VTFDIIIRALFEKDENDKAEKILREM 503
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
P N I+ + ++ + +F + PDL T +I+++ +
Sbjct: 53 PPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAF 112
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ FA++ + G P+ I+ NTL+ L + L + ++ G + D ++Y LI+
Sbjct: 113 SVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGL 172
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+TG + RL ++ ++P + +Y ++I++L K + A ++ EM
Sbjct: 173 CKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 223
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ L K G + A ++L ++ K P+ YN ++ +++ + + +
Sbjct: 271 NILIDALSKEGKMKEA-KILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMA 329
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T CYTN T + + EE+ I+ N +I K+ +E
Sbjct: 330 QRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 389
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + +K +PD+ +Y I+LD L + GR+ D F + G + +Y L+
Sbjct: 390 RAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLI 449
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
N L K D L +M + G PD +T+ +I + +++ ++ +M
Sbjct: 450 NRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 53/128 (41%)
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
++ P +N +L L +++ F + G+ PD + + L+N + L
Sbjct: 51 MRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITL 110
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
F + + G P+ +T LI G I+++L + + Q + Y +LI+
Sbjct: 111 AFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLIN 170
Query: 252 NLKKMGKV 259
L K G+
Sbjct: 171 GLCKTGET 178
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y FA + L I ++E++ P I +I + + + A F +K
Sbjct: 27 YVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMK 86
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
L C PD++ YNI++ G+ G + + F+ +K+ G++PD +Y +L+ RK+ +D
Sbjct: 87 LLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNID 146
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+EM E+GIKPD + Y+ LID FG+ G E++ F +++ P Y +LI
Sbjct: 147 KGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLI 206
Query: 251 DNLKKMGKVDLAMTIFEEMNSSL 273
K+G VD A +F+E S
Sbjct: 207 HAFAKVGMVDQATLVFKEAQRSF 229
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 135/303 (44%), Gaps = 46/303 (15%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K GN S A++ L+D+ + LP++ Y VL A + +ID + LK++ +
Sbjct: 106 KRGNFSQAMKYFSQLKDEGL-LPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQ 164
Query: 69 DCYT----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
Y+ F +A D F E + P+S+ N +I AFAK +++A L
Sbjct: 165 VAYSILIDMFGKAGRHEDAAA---TFRELQMSGYLPDSV-AYNTLIHAFAKVGMVDQATL 220
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F + C D + + ++ + + + L+ MKE G+ P+ + Y ++LN
Sbjct: 221 VFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFM 280
Query: 185 KIRRLDLCLIYFREMGES-----------------------------------GIKPDLL 209
+ + + F EM ES G + +++
Sbjct: 281 RANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVV 340
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ LID +G+ G ++E+ RLF+ MKQQ + ++ VY +++D K G+++ A + E+
Sbjct: 341 AYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAEL 400
Query: 270 NSS 272
S
Sbjct: 401 KDS 403
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ KA A+ +L+ +++ + PN Y VL A N + ++ +++ S+
Sbjct: 241 IQVYAKARMADQALHVLKLMKEIGL-QPNELGYGSVLNAFMRANQPMGAIKLFEEMQESN 299
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + + ++ Q+ +++ + +I + K ++++A
Sbjct: 300 CRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEAT 359
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K CK +LI YN +LD+ G+ GR+ND A +K++ +VPD ++Y TL+N
Sbjct: 360 RLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAY 419
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ R + C+ F + G+K D + +I+ +G+ + L M + I+P
Sbjct: 420 NRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDT 479
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
+ +++++ + G + A + ++N L L G
Sbjct: 480 RILKTVVEIYEDGGMCENAAELLRKIN-ELGPLEG 513
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
+ P I++ N +I + K +A+ F +K PD TY VL +VG ++
Sbjct: 88 LGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDK 147
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
M+EAG+ PD ++Y+ L++ K R + FRE+ SG PD + Y LI
Sbjct: 148 GNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIH 207
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F + G ++++ +F + ++ ++ ++I K D A+ + + M
Sbjct: 208 AFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLM 260
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 40/102 (39%)
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G P F Y + L ++++ I EM PD+ Y +I TG + +
Sbjct: 19 GFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTA 78
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F+ MK P I +Y LI K G AM F ++
Sbjct: 79 QHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQL 120
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 101/180 (56%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F +++ S+ N +I K +E A +F +K PD++TYN ++D G
Sbjct: 242 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 301
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ + F MK+A PD I+YN L+N K R+ + EM +G+KP+++
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ ID+F + G ++E+++ F DM++ + P+ + Y SLID K G + A+ + EE+
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 1/262 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
L + G + A +R +F P + N +L ++ DLS + KD+ + S
Sbjct: 195 LIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRS 254
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y D ++ + I+ N +I K +++ + IF+
Sbjct: 255 VFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFE 314
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K C PD+ITYN +++ + R+ MK G+ P+ ++Y+T ++ K
Sbjct: 315 QMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEG 374
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
L + +F +M + P+ TYT+LID+ + GN+ E+L+L ++ Q I+ ++ Y
Sbjct: 375 MLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYT 434
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+L+D L + G++ A +F M
Sbjct: 435 ALLDGLCEEGRMKEAEEVFRAM 456
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 36/300 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CKAGN++ A++L++ + I L Y +L E + + ++ + +L +
Sbjct: 402 IDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 461
Query: 65 TLSSDCYTNFARAFI--------------MTDDCTQ--LLIF------------IEEVVQ 96
+ + YT FI M + C + LL++ +EE
Sbjct: 462 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 521
Query: 97 IASP--ESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ ES I N +I+ A+ KS Q +AL + + + L +TY ++D L
Sbjct: 522 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLC 581
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G V + ++ F M E G+ P+ Y L++ L K ++ F EM + G+ PD +
Sbjct: 582 KSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKI 641
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
YTALID + GN++E+L L + M + + ++ Y +LI L G+V A + +EM
Sbjct: 642 AYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM 701
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 117 RQIEKALLIFDHIKGLK--CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
R++ + +FD + + C P ++ + L +G + + F M++ V P
Sbjct: 162 RRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPR 221
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S N LL+ L K+ R DL +F++MG +GIK + TY +ID + G++E + LF M
Sbjct: 222 SCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM 281
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
K+ P I Y SLID K+G +D + IFE+M + D
Sbjct: 282 KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 322
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G + + + + ++D + P+ YN ++ + + +F+ L ++
Sbjct: 294 NSLIDGHGKLGLLDECICIFEQMKDADC-DPDVITYNALINCFCKFERMPKAFEFLHEMK 352
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y+ F AF + + F ++ ++A + +I A K+ +
Sbjct: 353 ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLA 412
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + I K +++TY +LD L GR+ + F +M AGV P+ +Y L+
Sbjct: 413 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 472
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + ++ +EM E IKPDLL Y ++ +EE+ L ++K+ I
Sbjct: 473 HGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGIN 532
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +Y +L+D K G+ A+T+ EEM
Sbjct: 533 TNAVIYTTLMDAYFKSGQATEALTLLEEM 561
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 132/284 (46%), Gaps = 12/284 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
+G+I KA + A +L+ +++K I P+ Y +L + ++ + ++ ++
Sbjct: 473 HGFI----KAKEMEYAKDILKEMKEKCI-KPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S ++ YT A+ + T+ L +EE++ + + + +I KS ++
Sbjct: 528 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQ 587
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ F + + +P++ Y ++D L + F M + G++PD I+Y L+
Sbjct: 588 EAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 647
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K L L M E G++ DL YTALI +G ++++ L ++M + +
Sbjct: 648 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 707
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN-----SSLSDLAGP 279
P VY LI +GKVD A+ + EM + LSD A P
Sbjct: 708 PDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAVP 751
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 129/279 (46%), Gaps = 17/279 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS---FQILK 57
N I+ LCK G++ A L +++ F P+ YN ++ + +D F+ +K
Sbjct: 259 NIMIDYLCKEGDLEMARSLFTQMKEAG-FTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 317
Query: 58 DLLVSSRTLSSD----CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
D ++ + C+ F R + F+ E+ +++ + I AF
Sbjct: 318 DADCDPDVITYNALINCFCKFERM-------PKAFEFLHEMKANGLKPNVVTYSTFIDAF 370
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K +++A+ F ++ + P+ TY ++D + G + + L + +AG+ +
Sbjct: 371 CKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNV 430
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++Y LL+ L + R+ FR M +G+ P+ TYTAL+ F + +E + + +
Sbjct: 431 VTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKE 490
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
MK++ I+P + +Y +++ L +++ A + E+ S
Sbjct: 491 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES 529
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + + A + +E+A F ++ + P + N +L L +VGR + F M
Sbjct: 187 VFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM 246
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
AG+ +YN +++ L K L++ F +M E+G PD++TY +LID G+ G +
Sbjct: 247 GAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLL 306
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E + +F MK P + Y +LI+ K ++ A EM ++
Sbjct: 307 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 354
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK + A L ++ N PN Y+ + A + + + + D+
Sbjct: 329 NALINCFCKFERMPKAFEFLHEMK-ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 387
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T + YT+ A + + L +EE++Q +++ ++ + +++
Sbjct: 388 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 447
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + P+ TY ++ + + + MKE + PD + Y T+L
Sbjct: 448 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 507
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L RL+ + E+ ESGI + + YT L+D++ ++G E+L L +M +
Sbjct: 508 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLI 567
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ Y +LID L K G V AM F M+
Sbjct: 568 ATEVTYCALIDGLCKSGLVQEAMHHFGRMS 597
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN SAA+RLL S+ KN PN AYN ++ + + + +F + +++ +
Sbjct: 173 INGLCKVGNTSAAIRLLGSMVQKNC-QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV--T 229
Query: 64 RTLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ +S D +T + + + C + + E+V ++ N ++ A K ++ +
Sbjct: 230 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 289
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + D + +P+++TY ++D + +++ + F +M G +P+ ISYNTL+N
Sbjct: 290 AHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLIN 349
Query: 182 NLRKIRRLDLCLIY-------------------FREMGESGIKPDLLTYTALIDSFGRTG 222
KI+R+D + Y F M G P++++Y LI+ + +
Sbjct: 350 GYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 409
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I++++ LF +M +Q++ P Y +LI L + ++ A+ +F EM
Sbjct: 410 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 456
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 33 PNAYNC-VLVAS-AETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN Y +L+ S N + +F +L +L + +T R + + L
Sbjct: 94 PNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHL 153
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ ++ +I K A+ + + C+P++ YN ++D L +
Sbjct: 154 FDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK 213
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V + N F+ M G+ PD +YN+L++ L + EM +S I PD+++
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++D+ + G + E+ + + M Q+ + P++ Y +L+D + ++D A+ +F+ M
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 126/273 (46%), Gaps = 23/273 (8%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDID--LSFQILKDLLVSSRT 65
C + AV++ ++ K +PN +YN ++ + ID + + L D
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGC-MPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXC---- 371
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
CY N A + +F V + P ++I N +I + K ++I+KA+ +
Sbjct: 372 ----CYLNMDEA---------VKVFDTMVCKGCMP-NVISYNTLINGYCKIQRIDKAMYL 417
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F + + PD +TY+ ++ L V R+ D + F M +P+ ++Y LL+ L K
Sbjct: 418 FGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCK 477
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
R L + + + S + PD+ ID R G +E + LF+++ + ++P ++
Sbjct: 478 NRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWT 537
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
Y +I+ L + G +D A +F EM+ + L G
Sbjct: 538 YSIMINGLCRRGLLDEASKLFREMDENGCTLNG 570
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++++ P S + N+++ + AK + L + + P++ T +I+++ + R
Sbjct: 52 MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNR 111
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V + A + + G PD ++ TL+ + ++ L F +M G +PD++TY
Sbjct: 112 VGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGT 171
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ + GN ++RL M Q+ +P+++ Y ++ID+L K +V A +F EM
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
+ LL ++ P +I ++ +I +F ++ A + I L +PD T+ +
Sbjct: 78 STLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTL 137
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+ + G++ + L+ F M G PD ++Y TL+N L K+ + M +
Sbjct: 138 IRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC 197
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+P++ Y +IDS + + E+ LF++M + I P I+ Y SLI L + + T
Sbjct: 198 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT 257
Query: 265 IFEEM 269
+ EM
Sbjct: 258 LLNEM 262
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 100/231 (43%), Gaps = 3/231 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C N+ AV++ ++ K +PN +YN ++ + ID + + ++
Sbjct: 367 MDXXCCYLNMDEAVKVFDTMVCKGC-MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 425
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ + + E+V + +++ ++ K+R + +A+
Sbjct: 426 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 485
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ I+G PD+ NI +D + R G + + F+++ G+ PD +Y+ ++N L
Sbjct: 486 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 545
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ LD FREM E+G + Y + F R +++L +M
Sbjct: 546 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 596
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
+ +F E Q P+++ + +I +++ A+ +F + P+L+TY I+LD
Sbjct: 415 MYLFGEMCRQELIPDTV-TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 473
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L + + + + +++ + + PD N ++ + + L+ F + G++P
Sbjct: 474 YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 533
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D+ TY+ +I+ R G ++E+ +LF +M + + +Y ++ + + A+ +
Sbjct: 534 DVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLL 593
Query: 267 EEM 269
+EM
Sbjct: 594 QEM 596
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 104 IVVNRI-IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I VN I I ++ ++E A +F ++ +PD+ TY+I+++ L R G +++ F
Sbjct: 500 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 559
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G + YNT+ + + +EM G D T T + G
Sbjct: 560 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619
Query: 223 NIEESLR 229
+++SL+
Sbjct: 620 -LDQSLK 625
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G + A+ LL+ + D N P+ Y ++ + ++++ K++
Sbjct: 204 NALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 262
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L + CYT R + Q + + ++ ++ +I K+ +I
Sbjct: 263 LRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIG 322
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ IF ++ P+ + Y+ ++ L + +++ L A MK+A PD I+YN L+
Sbjct: 323 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 382
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ +F EM E+G KPD+ TY L+ F + GN + + +F+DM
Sbjct: 383 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCS 442
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +LI L K ++ A F+ M
Sbjct: 443 PNVVTYGTLISGLCKRRQLTKASLYFQHM 471
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 39/263 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKAG + AAVR+ +S+ + + PN Y+ ++ + +D + ++L +
Sbjct: 312 IDGLCKAGRIGAAVRIFKSMEARGL-APNEVVYSALIHGLCKARKMDCALEMLAQM---- 366
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+AF D I N +I KS +E A
Sbjct: 367 -----------KKAFCTPD--------------------TITYNILIDGLCKSGDVEAAR 395
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
FD + CKPD+ TYNI++ + G + F M + P+ ++Y TL++ L
Sbjct: 396 AFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGL 455
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+L +YF+ M E G PD Y++L+D ++G +E LF++M++ + S
Sbjct: 456 CKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ 515
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
R LI +L K +VD A+++F
Sbjct: 516 TRTR-LIFHLCKANRVDEAVSLF 537
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 88/163 (53%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ AK+++I+ A+ + + I C P + TYN +L+ L ++GR+ + ++ + + G
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y +L++ L K +R F+EM G+ D + YTALI + G I ++
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQAS 290
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ M Q P + ++ID L K G++ A+ IF+ M +
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 333
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E++ +I N ++ K ++E+A+ + I C PD++TY ++D LG
Sbjct: 187 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 246
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ R + F M G+V D + Y L+ L + ++ ++ M G PD++
Sbjct: 247 KEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 306
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T + +ID + G I ++R+F M+ + + P+ VY +LI L K K+D A+ + +M
Sbjct: 307 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366
Query: 270 NSSL 273
+
Sbjct: 367 KKAF 370
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 36/166 (21%)
Query: 140 TYNIVLDILGRVGRVNDMLN--------------------------------EFASMKEA 167
T N +LD+ R R + N FA ++E
Sbjct: 61 TGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREM 120
Query: 168 ----GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
GV P ++N +L+ L K ++ + +F +G D+ TYTA++D +
Sbjct: 121 EEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKK 180
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I++++ L + P+I Y +L++ L KMG+++ A+ + ++
Sbjct: 181 IQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 226
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 1/275 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLV 61
N + LCKA V A + + LR+ FL L+ ++ +D + ++L+++
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT F D + L F E++ ++I + +I KS ++
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRD 569
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
++ + PD I Y V+D L + ++ + MK+ G P ++YN L++
Sbjct: 570 GCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVD 629
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K+ RLD + M G PD +TY ++ D F ++ +++ RLF MK + P
Sbjct: 630 KLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSP 689
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ ++Y L+ L K+D AM I+EE + +D+
Sbjct: 690 TPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADV 724
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 37 NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ 96
NC+L A ++ + K+ + S Y+ F D Q ++E+ +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
V N II + +++ AL+ + ++ C P +ITY I++D L + R++D
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARISD 254
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
M EAG P+ ++YNTL+N K+ +D ++ F +M E+ PD+ TY LID
Sbjct: 255 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 314
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ + ++ +L +M + P+ Y +L+D+L K GK
Sbjct: 315 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 356
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 34/270 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ CK G + A L Q + D+ LP+ Y ++ I+
Sbjct: 380 NLMIDMFCKVGQLDLAYELFQLMTDRGC-LPDIY---------------TYNIM------ 417
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+S C N DD QLL E + + P ++ N I+ K+ Q+++A
Sbjct: 418 ---ISGACRAN------RIDDARQLL---ERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 465
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+++ ++ D++T + ++D L + R++D M+ G PD ++Y L++
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K +LD L +F EM + G P ++TY+ +ID ++ + + L M ++ + P
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPD 585
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
VY S+ID L K D A +++ M +
Sbjct: 586 AIVYTSVIDGLCKSDSYDEAYELYKLMKQT 615
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 49/304 (16%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CKA + A RLL + + I NA YN ++ + +D + LV R
Sbjct: 174 INGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA-------LVHYR 226
Query: 65 TLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ +C YT A + + + +E++++ +++ N +I F K
Sbjct: 227 DMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 286
Query: 119 IEKALLIFDHI--------------------------KGLK---------CKPDLITYNI 143
+++A+++F+ + G K C+P+ ITYN
Sbjct: 287 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 346
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++D L + G+ D N M P ++N +++ K+ +LDL F+ M + G
Sbjct: 347 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 406
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
PD+ TY +I R I+++ +L M + P + Y S++ L K +VD A
Sbjct: 407 CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 466
Query: 264 TIFE 267
++E
Sbjct: 467 EVYE 470
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 123/300 (41%), Gaps = 50/300 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK GN+ AV L + + N P+ YN ++ + ++L+++
Sbjct: 275 NTLINGFCKLGNMDEAVVLFNQMLE-NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM- 332
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE------VVQIASPESIIVVNRIIFAFA 114
+ C NF + D + +I+ +++ S N +I F
Sbjct: 333 -----VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFC 387
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K Q++ A +F + C PD+ TYNI++ R R++D M EAG PD +
Sbjct: 388 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 447
Query: 175 SYN-----------------------------------TLLNNLRKIRRLDLCLIYFREM 199
+YN TL++ L K RRLD REM
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM 507
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+G PD++ YT LI F + +++SL F++M + P++ Y +ID L K +V
Sbjct: 508 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 567
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 126/275 (45%), Gaps = 5/275 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK+ +S A +L+ + + PN YN ++ + ++D + + +L +S
Sbjct: 243 VDALCKSARISDASLILEDMIEAGC-APNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + ++E+V+ + I N ++ + KS + A
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + CKP T+N+++D+ +VG+++ F M + G +PD +YN +++
Sbjct: 362 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 421
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R+D M E+G PD++TY +++ + ++E+ ++ ++ +
Sbjct: 422 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
+LID L K ++D A + EM N S D+
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 516
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 39/196 (19%)
Query: 119 IEKALLIFDHIKGLKC-KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++KA+ FD G K T N +L R + + + F + + PD I+Y+
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171
Query: 178 TLLNNLRKIR-----------------------------------RLDLCLIYFREMGES 202
TL+N K R R+D L+++R+M +
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QR 230
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
P ++TYT L+D+ ++ I ++ + DM + P++ Y +LI+ K+G +D A
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290
Query: 263 MTIFEEM--NSSLSDL 276
+ +F +M NS D+
Sbjct: 291 VVLFNQMLENSCSPDV 306
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 3/204 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CKA + ++ + DK +P Y+ V+ ++ + +LK +L
Sbjct: 523 IHGFCKADQLDKSLAFFSEMLDKGC-VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + YT+ +D + + + Q +++ N ++ K ++++A+
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + ++ C PD +TYN V D + + F +MK G P Y+ LL L
Sbjct: 642 HLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701
Query: 184 RKIRRLDLCLIYFREMGESGIKPD 207
++D + + E E+G D
Sbjct: 702 VAEEKMDQAMEIWEEALEAGADVD 725
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+KLCK+ V LL+++ ++ + P+A Y V+ +++ D ++++ K + +
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGV-TPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + +E + + N + F KS + +KA
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K C P Y+++L L +++ + + EAG D TL N
Sbjct: 677 RLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTLQQNK 736
Query: 184 R 184
R
Sbjct: 737 R 737
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKAG + A RL + + +K+ +P+ AY + + N + + + ++
Sbjct: 186 LDGLCKAGRLDEACRLWEEMVEKSC-VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244
Query: 64 RTLSSDCYT---------------------NFARAFIMTDDCTQLLIFIEEVVQIASPES 102
+ ++ + R+ ++ + C EE++ P S
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF----EEMISRNHPPS 300
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLK---CKPDLITYNIVLDILGRVGRVNDMLN 159
+ N +I A KS+++ +L+F +K +K C P+L TYNI++D L + ++++
Sbjct: 301 AELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
M G+ PD ++Y+ L++ L K+ +LD EM + G+ PD T +++++
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G ++ +L MK + P + Y +L+D L K G++D A+T +M
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETN---DIDLSFQILK 57
N IE LC++G + A + + + +N P+A +N ++ A ++ D L FQ +K
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRN-HPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDD---CTQLLIFIEEVVQIA----SPESIIVVNRII 110
+ C N IM D+ QL E V ++A SP+ ++ + ++
Sbjct: 329 SMK------EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD-VVTYSALV 381
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K ++++A + + + PD T +L+ L + G+V+ L+ +MK G
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++YNTLL+ L K R+D + + +M + PD+ +YT +I + R+G + +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
F +M ++ + P +Y SL+D L + G DLA+ + +
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ K+ +++KA + ++ K ++ITY++V+D + RV+D L F +M G
Sbjct: 79 VLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGG 138
Query: 169 -VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
VPD +++N+LL L R+ + F M ++G +P++++Y+ L+D + G ++E+
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEA 198
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RL+ +M ++ P + Y S + L K +V A +M
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 20/279 (7%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G +S VRL L + + + YNC L A A+ N L+++ + +
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ R + + + ++ + ++I + +I K+ +++ AL IF +
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 131 -GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
G C PD++T+N +L L R+++ F M +AG P+ ISY+TLL+ L K RL
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS- 248
D + EM E PDL+ YT+ + + + E+ M + + + +
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255
Query: 249 ----------------LIDNLKKMGKVDLAMTIFEEMNS 271
+I++L + G +D A FEEM S
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 10/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA + A L+ + + + P+ Y+ ++ + +D + +L+++ S
Sbjct: 346 VDNLCKAKQLDEAQELVNEMANYGLS-PDVVTYSALVDGLCKLGKLDRACDLLEEM--SK 402
Query: 64 RTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ D +T+ + A L +E + S ++ N ++ K+ +I++
Sbjct: 403 EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDE 462
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + KC PD+ +Y I++ L R G+ F M + GV+PD + Y++LL+
Sbjct: 463 AITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLD 522
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + DL L + S KPD + + ++D + G E++ + M
Sbjct: 523 GLARNGLEDLALELLKT---SLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPA 579
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ Y S++ L+K+GKVD A + ++ + +
Sbjct: 580 DAFTYISVVSGLRKLGKVDKARQLVDDASET 610
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKAG + A RL + + +K+ +P+ AY + + N + + + ++
Sbjct: 186 LDGLCKAGRLDEACRLWEEMVEKSC-VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244
Query: 64 RTLSSDCYT---------------------NFARAFIMTDDCTQLLIFIEEVVQIASPES 102
+ ++ + R+ ++ + C EE++ P S
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF----EEMISRNHPPS 300
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLK---CKPDLITYNIVLDILGRVGRVNDMLN 159
+ N +I A KS+++ +L+F +K +K C P+L TYNI++D L + ++++
Sbjct: 301 AELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
M G+ PD ++Y+ L++ L K+ +LD EM + G+ PD T +++++
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G ++ +L MK + P + Y +L+D L K G++D A+T +M
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETN---DIDLSFQILK 57
N IE LC++G + A + + + +N P+A +N ++ A ++ D L FQ +K
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRN-HPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDD---CTQLLIFIEEVVQIA----SPESIIVVNRII 110
+ C N IM D+ QL E V ++A SP+ ++ + ++
Sbjct: 329 SMK------EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD-VVTYSALV 381
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K ++++A + + + PD T +L+ L + G+V+ L+ +MK G
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++YNTLL+ L K R+D + + +M + PD+ +YT +I + R+G + +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
F +M ++ + P +Y SL+D L + G DLA+ + +
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ K+ +++KA + ++ K ++ITY++V+D + RV+D L F +M G
Sbjct: 79 VLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGG 138
Query: 169 -VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
VPD +++N+LL L R+ + F M ++G +P++++Y+ L+D + G ++E+
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEA 198
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RL+ +M ++ P + Y S + L K +V A +M
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 20/279 (7%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G +S VRL L + + + YNC L A A+ N L+++ + +
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ R + + + ++ + ++I + +I K+ +++ AL IF +
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 131 -GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
G C PD++T+N +L L R+++ F M +AG P+ ISY+TLL+ L K RL
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS- 248
D + EM E PDL+ YT+ + + + E+ M + + + +
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255
Query: 249 ----------------LIDNLKKMGKVDLAMTIFEEMNS 271
+I++L + G +D A FEEM S
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 125/271 (46%), Gaps = 10/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA + A L+ + + + P+ Y+ ++ + +D + +L+++ S
Sbjct: 346 VDNLCKAKQLDEAQELVNEMANYGLS-PDVVTYSALVDGLCKLGKLDRACDLLEEM--SK 402
Query: 64 RTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ D +T+ + A L +E + S ++ N ++ K+ +I++
Sbjct: 403 EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDE 462
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + KC PD+ +Y I++ L R G+ F M + GV+PD + Y++LL+
Sbjct: 463 AITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLD 522
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + DL L + S KPD + + ++D + G E++ + M
Sbjct: 523 GLARNGLEDLALELLKT---SLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPA 579
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ Y +++ L+K+GKVD A + ++ + +
Sbjct: 580 DAFTYINVVRGLRKLGKVDKARQLVDDASET 610
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 94/163 (57%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F + I++A+ + + C PD++TYNI+L L + G+V+D + + +
Sbjct: 360 NPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 419
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G P ISYNT+++ L K+ + +L + EM G+KPDL+T T+++ R G + E
Sbjct: 420 KGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVRE 479
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ F+ +K+ IRP+ ++Y S+I L K + LA+ +M
Sbjct: 480 AMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADM 522
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I CK+G + A+R+L D+ PNA Y+ VL + + + + Q+L
Sbjct: 153 NVLISGYCKSGEIEEALRVL----DRMGVSPNAATYDAVLCSLCDRGKLKQAMQVL---- 204
Query: 61 VSSRTLSSDCYTNFARAFIMTD------DCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
R L S CY + ++ D Q + E+ ++ N +I F
Sbjct: 205 --GRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K ++++A+ + C+PD+I++N++L L GR D + A+M G +P +
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322
Query: 175 SYNTLLN-------------------------NLRKI----------RRLDLCLIYFREM 199
++N L+N N R + +D + Y M
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G PD++TY L+ + + G +++++ + + + + PS+ Y ++ID L K+GK
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442
Query: 260 DLAMTIFEEM 269
+LA+ + EEM
Sbjct: 443 ELAVELLEEM 452
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC G A++LL ++ K LP+ +N ++ + + + +L+ +
Sbjct: 290 NMILRSLCSGGRWMDAMKLLATMLRKGC-LPSVVTFNILINFLCQKGLLGKALNVLEMMP 348
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T +S + + F + + ++E +V I+ N ++ A K +++
Sbjct: 349 KHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVD 408
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A++I + C P LI+YN V+D L +VG+ + M G+ PD I+ +++
Sbjct: 409 DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVV 468
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + ++ + +F + I+P+ Y ++I ++ ++ DM + +
Sbjct: 469 GGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCK 528
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y +LI + G + A + E+ S
Sbjct: 529 PTEATYTTLIKGITYEGLAEDASKLSNELYS 559
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+E + +I +I F K + + A I ++ D+ +YN+++
Sbjct: 101 FLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYC 160
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G + + L M GV P+ +Y+ +L +L +L + +S PD++
Sbjct: 161 KSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVV 217
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T T LID+ + + ++++LFN+M+ + +P + Y LI K G++D A+ +++
Sbjct: 218 TCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKL 277
Query: 270 NS 271
S
Sbjct: 278 PS 279
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 143/269 (53%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G AA++LL+ + D + PN YN ++ + + ++ +F + +++ S
Sbjct: 150 INGLCKVGQARAALQLLRRV-DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV--S 206
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S D Y+ F + + +F + +++ P+ + N ++ F K +++
Sbjct: 207 EGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPD-VYTFNILVDGFCKDGKMK 265
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F + KP+++TY ++D V +VN + F +M + GV PD SYN ++
Sbjct: 266 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMI 325
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N KI+++D + F++M I P+++TYT+LID ++G I +L+L ++M + +
Sbjct: 326 NGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVP 385
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P I Y S++D L K +VD A+ + ++
Sbjct: 386 PDIITYSSILDALCKNHQVDKAIALLTKL 414
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 87/161 (54%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K Q AL + + G +P+++ YN ++D + +V VN+ + ++ M G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD ++Y+ L++ + +L + F +M IKPD+ T+ L+D F + G ++E
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F M +Q I+P++ Y SL+D + +V+ A +IF M
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTM 309
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 3/141 (2%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
IKGL K ++Y +++ L +VG+ L + V P+ + YNT+++++ K++
Sbjct: 137 IKGLCLK---VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 193
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ + EM GI PD++TY+ALI F G +++++ LFN M + I+P +Y +
Sbjct: 194 VNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNI 253
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+D K GK+ T+F M
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMM 274
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 32/170 (18%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S++ +N A + RQ+E +KG+ +L+T NI+++ ++G+ + F
Sbjct: 69 SLVKINCYHTAISLHRQME--------LKGIA--SNLVTLNILINCFSQLGQNPLSFSVF 118
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A++ + G P+ I+ TL+ L CL ++Y LI+ +
Sbjct: 119 ANILKKGYDPNVITLTTLIKGL--------CL--------------KVSYGTLINGLCKV 156
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G +L+L + + ++P++ +Y ++ID++ K+ V+ A ++ EM S
Sbjct: 157 GQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 206
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 57/183 (31%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCK---PDLITYNIVLDILGRVGRVNDMLNEFAS 163
N +I F K +++++A+ +F K + CK P+++TY ++D L + G+++ L
Sbjct: 322 NIMINGFCKIKKVDEAMNLF---KKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDE 378
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLD--------------------------------- 190
M + GV PD I+Y+++L+ L K ++D
Sbjct: 379 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMI 438
Query: 191 --LC--------LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
C L +M ++G PD TY +I S + NDM ++ +R
Sbjct: 439 QGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDE--------NDMAEKLLR 490
Query: 241 PSI 243
I
Sbjct: 491 EMI 493
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 75/180 (41%), Gaps = 12/180 (6%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+YN ++ + +D + + K + + + YT+ + + L ++E+
Sbjct: 320 SYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEM 379
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH----------IKGLKCKPDLITYNIV 144
P II + I+ A K+ Q++KA+ + +KG D+ Y ++
Sbjct: 380 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNL--DVYAYTVM 437
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+ G N+ L + M++ G +PD +Y ++ +L K D+ REM G+
Sbjct: 438 IQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 131/268 (48%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLV 61
N I+ LCK V AV + + L K + C LV + + ++ +++ ++L
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLR 325
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ S ++ + L ++ V + +I V N +I + K R ++
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDE 385
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A L+FD + + P+ +TY+I++D+ R G+++ L+ M + G+ P YN+L+N
Sbjct: 386 AELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLIN 445
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K + EM ++P ++TYT+L+ + G I ++LRL+++M + I P
Sbjct: 446 GHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVP 505
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
SIY + +L+ L + G + A+ +F EM
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFTEM 533
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 35/234 (14%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT R+ D ++ I ++ +I+ N +I K +++ +A+ I +
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 131 GLKCKPDLITYNIVLDILGRV-----------------------------------GRVN 155
G + KPD++TY ++ L +V G+V
Sbjct: 290 GKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVE 349
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ LN + E GV P+ YN L+++L K R D + F MG+ G+ P+ +TY+ LI
Sbjct: 350 EALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILI 409
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D F R G ++ +L +M ++PS+Y Y SLI+ K G + A ++ EM
Sbjct: 410 DMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEM 463
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 7/275 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD----KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
+E L K G V A+ L++ + + NIF+ NA L ++ +L F + + +
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGL 398
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ Y+ F L F+ E++ + S+ N +I K I
Sbjct: 399 CPNDVT---YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISA 455
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + K +P ++TY ++ G++N L + M G+VP ++ TLL+
Sbjct: 456 AESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLS 515
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + + + F EM E +KP+ +TY +I+ + GN+ ++ N+M ++ I P
Sbjct: 516 GLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVP 575
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
Y YR LI L G+ A + ++ +L
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 3/276 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK N A L + K PN Y+ ++ +D + L +++
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRM-GKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + D + + E++ +++ ++ + +I
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL ++ + G P + T+ +L L R G + D + F M E V P+ ++YN ++
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + EM E GI PD +Y LI TG E+ + + +
Sbjct: 550 EGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ Y L+ + GK++ A+++ ++M DL
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL 645
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 3/262 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSSRTLS 67
C G ++ A+RL + K I +P+ Y + S I + ++ ++ + +
Sbjct: 483 CSKGKINKALRLYHEMTGKGI-VPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPN 541
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + + ++ F+ E+++ +I + Q +A + D
Sbjct: 542 RVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ C+ + I Y +L R G++ + L+ M GV D + Y L++ K +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHK 661
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+ L +EM + G+KPD + YT++ID+ +TG+ +E+ +++ M + P+ Y
Sbjct: 662 DRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
++I+ L K G V+ A + +M
Sbjct: 722 AVINGLCKAGFVNEAEILCSKM 743
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 113/267 (42%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C+ G + A+ L + D + P+ Y N ++ + DI + ++ +++
Sbjct: 409 IDMFCRRGKLDTALSFLGEMIDMGL-KPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT+ + + L E+ SI ++ ++ I A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + KP+ +TYN++++ G ++ M E G+VPD SY L++ L
Sbjct: 528 KLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ ++ + + + + + YT L+ F R G +EE+L + DM + + +
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDL 647
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y LID K + + + +EM+
Sbjct: 648 VCYGVLIDGSLKHKDRKVFLGLLKEMH 674
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 118/272 (43%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
G + C+ G + A+ + Q + + + L Y ++ S + D + +LK++
Sbjct: 616 TGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEM-- 673
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
R L D YT+ A T D + + ++ + + +I K+ +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN--EFASMKEAGVVPDFISYN 177
+A ++ ++ P+ +TY LDIL + V DM E + G++ + +YN
Sbjct: 734 NEAEILCSKMRPGNSVPNQVTYGCFLDILTK--GVGDMKKAVELHNAILKGLLANTATYN 791
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+ + R++ M G+ PD +TYT +I R ++++++ L+N M ++
Sbjct: 792 MLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEK 851
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
IRP Y +LI G++ A + EM
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%)
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+R R LD L++ M + + P++ T +AL+ + + ++ LF+DM IRP
Sbjct: 167 VRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPD 226
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+Y+Y +I +L ++ + A + +M ++ D+
Sbjct: 227 VYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDV 260
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 101/180 (56%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F +++ S+ N +I K +E A +F +K PD++TYN ++D G
Sbjct: 43 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 102
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ + F MK+A PD I+YN L+N K R+ + EM +G+KP+++
Sbjct: 103 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 162
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ ID+F + G ++E+++ F DM++ + P+ + Y SLID K G + A+ + EE+
Sbjct: 163 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 222
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 111/237 (46%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P + N +L ++ DLS + KD+ + S Y D
Sbjct: 21 PRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFT 80
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ + I+ N +I K +++ + IF+ +K C PD+ITYN +++ +
Sbjct: 81 QMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFE 140
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ MK G+ P+ ++Y+T ++ K L + +F +M + P+ TYT
Sbjct: 141 RMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 200
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LID+ + GN+ E+L+L ++ Q I+ ++ Y +L+D L + G++ A +F M
Sbjct: 201 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 257
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G + + + + ++D + P+ YN ++ + + +F+ L ++
Sbjct: 95 NSLIDGHGKLGLLDECICIFEQMKDADCD-PDVITYNALINCFCKFERMPKAFEFLHEMK 153
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y+ F AF + + F ++ ++A + +I A K+ +
Sbjct: 154 ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLA 213
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + I K +++TY +LD L GR+ + F +M AGV P+ +Y L+
Sbjct: 214 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 273
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + ++ +EM E IKPDLL Y ++ +EE+ L ++K+ I
Sbjct: 274 HGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGIN 333
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +Y +L+D K G+ A+T+ EEM
Sbjct: 334 TNAVIYTTLMDAYFKSGQATEALTLLEEM 362
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 29/303 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CKAGN++ A++L++ + I L Y +L E + + ++ + +L +
Sbjct: 203 IDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 262
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + YT FI + ++E+ + +++ I++ ++E+A L
Sbjct: 263 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 322
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE--------------------F 161
+ IK + + Y ++D + G+ + +L E F
Sbjct: 323 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLF 382
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G++PD I+Y L++ K L L M E G++ DL YTALI +
Sbjct: 383 DEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHS 442
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN-----SSLSDL 276
G ++++ L ++M + + P VY LI +GKVD A+ + EM + LSD
Sbjct: 443 GQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 502
Query: 277 AGP 279
A P
Sbjct: 503 AVP 505
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M++ V P S N LL+ L K+ R DL +F++MG +GIK + TY +ID +
Sbjct: 9 FLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCK 68
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
G++E + LF MK+ P I Y SLID K+G +D + IFE+M + D
Sbjct: 69 EGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 123
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS---FQILKDLL 60
I+ LCK G++ A L +++ F P+ YN ++ + +D F+ +KD
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAG-FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 61 VSSRTLSSD----CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
++ + C+ F R + F+ E+ +++ + I AF K
Sbjct: 122 CDPDVITYNALINCFCKFERM-------PKAFEFLHEMKANGLKPNVVTYSTFIDAFCKE 174
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++A+ F ++ + P+ TY ++D + G + + L + +AG+ + ++Y
Sbjct: 175 GMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 234
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
LL+ L + R+ FR M +G+ P+ TYTAL+ F + +E + + +MK+
Sbjct: 235 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 294
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ I+P + +Y +++ L +++ A + E+ S
Sbjct: 295 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES 330
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A F ++ + P + N +L L +VGR + F M AG+ +YN
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K L++ F +M E+G PD++TY +LID G+ G ++E + +F MK
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y +LI+ K ++ A EM ++
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 155
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 123/242 (50%), Gaps = 2/242 (0%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P A Y C++ + ++ + IL+++ + + Y + D T
Sbjct: 190 PTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKV 249
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
E++V I++ N ++ AF K+ +++KAL + ++I+ + P + TY +LD +
Sbjct: 250 WEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVK 309
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + L F +K AG+ P +SYN+LL+ L K R+++ + EM +G+ P+ +
Sbjct: 310 GGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERS 369
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
YTAL + + R G++E++ +F MK++ + I Y +L+ K G + A +F+++
Sbjct: 370 YTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQIT 429
Query: 271 SS 272
+
Sbjct: 430 DA 431
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I AGN AA + + +N+ +P YN ++ A + +++ +L +
Sbjct: 94 ISGYASAGNNEAAEHWFEKFKAENL-VPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEG 152
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT F D + L F + + I+ F K+ + KAL
Sbjct: 153 FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKAL 212
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + P+ + Y +++D R G + M AG+ PD + YN L++
Sbjct: 213 DILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAF 272
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D L + + + P + TYT+++D + + GNI+++L +F+ +K +RP +
Sbjct: 273 CKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGV 332
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SL+ L K +++ A + EM
Sbjct: 333 VSYNSLLSGLAKARQMENARLMLNEM 358
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 10/273 (3%)
Query: 4 GYIEKL-CKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
G I KL KAGN++ A+ +L+ + DK+ PN Y ++ A D +F++ +D++
Sbjct: 196 GCIVKLFTKAGNMAKALDILEEM-DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 254
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y AF + L +E + +I I+ + K I+
Sbjct: 255 SAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQ 314
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYN 177
KAL +FD IK +P +++YN +L L + ++ + MLNE M GVVP+ SY
Sbjct: 315 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNE---MLANGVVPNERSYT 371
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L + ++ F+ M + + D++ Y AL+ + ++G ++ + +F +
Sbjct: 372 ALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDA 431
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ + Y +++D + G++ A + +M
Sbjct: 432 GLKHNRITYCTMLDGWARKGELSKARDLLNDMQ 464
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT+ A+ D + EE++ + V II +A + E A F+ K
Sbjct: 55 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 114
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P I YN ++ + G + + A M+E G + Y T+LN +IR +
Sbjct: 115 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEE 174
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
CL +F + G+ P TY ++ F + GN+ ++L + +M + + P+ +Y ++
Sbjct: 175 KCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIM 234
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
D + G A ++E+M S+
Sbjct: 235 DGYARGGDFTAAFKVWEDMVSA 256
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/268 (17%), Positives = 120/268 (44%), Gaps = 1/268 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
I +A ++ AV + + + I L A C +++ A + + + + +
Sbjct: 59 IHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENL 118
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
Y + +A+ + + + ++ + ++ + ++ FA+ R EK L
Sbjct: 119 VPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLS 178
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
F +K P TY ++ + + G + L+ M + GV P+ + Y +++
Sbjct: 179 FFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYA 238
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ + +M +G+KPD++ Y L+ +F + G ++++L + +++ ++ P+I
Sbjct: 239 RGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIE 298
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y S++D K G + A+ +F+ + ++
Sbjct: 299 TYTSILDGYVKGGNIQKALEVFDRIKTA 326
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 113/252 (44%), Gaps = 3/252 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+ G+ +AA ++ + + + P+ YN ++ A + +D + +L+++ + +
Sbjct: 239 RGGDFTAAFKVWEDMVSAGL-KPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTI 297
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
+ YT+ ++ + + L + + ++ N ++ AK+RQ+E A L+ +
Sbjct: 298 ETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNE 357
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ P+ +Y + + R G V F MK+ + D ++Y LL K
Sbjct: 358 MLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGA 417
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ F+++ ++G+K + +TY ++D + R G + ++ L NDM++ Y S
Sbjct: 418 MQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTS 477
Query: 249 LIDNLKKMGKVD 260
I + G +
Sbjct: 478 FIKACFRSGDTE 489
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 111/269 (41%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ CKAG + A+ +L+++ + N LP Y +L + +I + ++ + +
Sbjct: 269 VHAFCKAGRMDKALGVLENI-EANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAG 327
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + + E++ + + +A++ +EKA
Sbjct: 328 LRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAF 387
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K D++ Y +L + G + F + +AG+ + I+Y T+L+
Sbjct: 388 GMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGW 447
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L +M + G D + YT+ I + R+G+ EE M+++++ +
Sbjct: 448 ARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNA 507
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LI D A++ +E+ +S
Sbjct: 508 RTYTTLIHGWLAAADPDQAISCYEQAKAS 536
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 60/135 (44%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
KP L Y +++D R G F +M+ + + P+ Y +L++ + R ++ +
Sbjct: 14 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
EM GI+ + + ++I + GN E + F K + + P VY S++
Sbjct: 74 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 133
Query: 255 KMGKVDLAMTIFEEM 269
+ G ++ + +M
Sbjct: 134 QAGNMETVEALLAQM 148
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 144/309 (46%), Gaps = 41/309 (13%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAE-TNDIDLSFQILKDL 59
C I LC++G + A++L + + P+A + LV+S N +D S +L
Sbjct: 150 CQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKA 209
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ--IASPESIIVVNRIIFAFAKSR 117
+ + Y + I ++ E +Q + SP+ + N +I +
Sbjct: 210 SEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPD-VWSFNVVIKGVCRVG 268
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV-------------------------- 151
Q++KAL + + + C PD +T+NI++D L R
Sbjct: 269 QVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTF 328
Query: 152 ----------GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
G++ D + + M +G++P+ ++YN L+N K+ L + +++M
Sbjct: 329 TSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 388
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
PD++T+++LID + R G ++++LR+++DM Q +I+P++Y + +I +L K + D
Sbjct: 389 LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDE 448
Query: 262 AMTIFEEMN 270
A+ + E+N
Sbjct: 449 AICLLNELN 457
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ VS +L+ L+ + +PN + V+ + ++ + + D++ S
Sbjct: 296 VDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASG 355
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + D + +++ ++ P ++ + +I + + Q++ AL
Sbjct: 356 IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDAL 415
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYNTLL 180
I+ + + +P++ T++I++ L + R ++ +LNE + + P YN ++
Sbjct: 416 RIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPD--IAPQAFIYNPVI 473
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++D + + M E G +PD TYT LI + I E++ F++M +
Sbjct: 474 DVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCS 533
Query: 241 PSIYVYRSLIDNLKKMG---KVDLAMTIFEEMNSSLSDLAGP 279
P I L K G +VD M + SS+ + P
Sbjct: 534 PDSITVNCFISCLLKAGMPNEVDHVMRLASGGASSIQEFPSP 575
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 120 EKALLIFD--HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-EAGVVPD--FI 174
AL +F H L P + ++ +L R GR D L F M G PD F+
Sbjct: 127 SSALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFL 186
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S+ L+++ LD + E G + + Y L+ S G + + + LF
Sbjct: 187 SF--LVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERW 244
Query: 235 KQQQI-RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Q ++ P ++ + +I + ++G+V A+ + E MN
Sbjct: 245 IQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMN 281
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 10/274 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQIL 56
+C I LC+ G S A R+L++ ++F AYN ++ +D + +++
Sbjct: 76 LCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVF---AYNTLVAGYCRYGRLDAARRLI 132
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ V + YT R L +++++Q S++ ++ A KS
Sbjct: 133 ASMPVPPDAYT---YTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKS 189
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+A+ + D ++ C P+++TYN++++ + R GRV+D + G PD +SY
Sbjct: 190 SGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSY 249
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
T+L L RR D + F EM + P+ +T+ L+ F R G +E ++++ M Q
Sbjct: 250 TTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 309
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P+ + +I+ + K G+VD A M
Sbjct: 310 HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 343
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E +CK+ A+ +L +R K PN YN ++ +D + +IL L SS
Sbjct: 183 LEAVCKSSGFGEAMNVLDEMRAKGC-TPNIVTYNVIINGMCREGRVDDAKEILNRL--SS 239
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
D YT + + + E+V + + + ++ F + +E+
Sbjct: 240 YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVER 299
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + C P+ NIV++ + + GRV+D + +M G PD ISY T+L
Sbjct: 300 AIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLR 359
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R + EM P+ +T+ I + G IE++++L M +
Sbjct: 360 GLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSV 419
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I Y +L+ G+VD A+ +F +
Sbjct: 420 GIVTYNALVHGFCVQGRVDSALELFNNL 447
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 127/311 (40%), Gaps = 45/311 (14%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN----AYNCVLVASAETNDIDLSFQIL 56
+CN I +CK G V A L ++ ++ N +Y VL + + ++L
Sbjct: 318 LCNIVINAICKQGRVDDAYDFLNNM---GMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+++ + + + F Q + IE + + I+ N ++ F
Sbjct: 375 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 434
Query: 117 RQIEKALLIFDHIKGLKCKPDLITY----------------------------------- 141
+++ AL +F++ L C+P+ ITY
Sbjct: 435 GRVDSALELFNN---LPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTF 491
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+++ + G V + + M E G P+ I++NTLL+ + K + L +
Sbjct: 492 NVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVS 551
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G+ D +TY++++D R EE++++ + ++ +RP + +Y ++ L K + D
Sbjct: 552 KGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQ 611
Query: 262 AMTIFEEMNSS 272
A+ F M S+
Sbjct: 612 AIDFFAYMVSN 622
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 117/269 (43%), Gaps = 6/269 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLL 60
N + C+ G + AA RL+ S+ P+AY ++ + + + +L D+L
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASMP----VPPDAYTYTPIIRGLCDRGRVGDALALLDDML 168
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S YT A + + + ++E+ +I+ N II + +++
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 228
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A I + + +PD+++Y VL L R +D+ FA M + VP+ ++++ L+
Sbjct: 229 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 288
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ ++ + ++M + G P+ +I++ + G ++++ N+M
Sbjct: 289 RFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCN 348
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +++ L + G+ + A + EM
Sbjct: 349 PDTISYTTVLRGLCRAGRWEHAKELLPEM 377
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 3/196 (1%)
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
R I DD + +E + + ++I + + A + +
Sbjct: 47 RRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAP 106
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
D+ YN ++ R GR++ ASM V PD +Y ++ L R+ L
Sbjct: 107 VDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALAL 163
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+M + G +P ++TYT L+++ ++ E++ + ++M+ + P+I Y +I+ + +
Sbjct: 164 LDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR 223
Query: 256 MGKVDLAMTIFEEMNS 271
G+VD A I ++S
Sbjct: 224 EGRVDDAKEILNRLSS 239
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 117/268 (43%), Gaps = 4/268 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N +I LC+ G + A++L++ + + + YN ++ +D + ++ +L
Sbjct: 390 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPC 449
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T++ YT + + ++Q P + + N ++ F + +E+
Sbjct: 450 EPNTIT---YTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEE 506
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + + C P+LIT+N +LD + + + L + GV D I+Y+++++
Sbjct: 507 AMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVD 566
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R + + + + G++P + Y ++ + + ++++ F M P
Sbjct: 567 VLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMP 626
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y LI+ L G + A + E+
Sbjct: 627 NESTYIILIEGLAHEGLLKEARYVLSEL 654
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 102/239 (42%), Gaps = 6/239 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + C G V +A+ L +L + PN Y +L +D + ++L ++
Sbjct: 425 NALVHGFCVQGRVDSALELFNNLPCE----PNTITYTTLLTGLCHAERLDAAAELLAGMI 480
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L++ + F + + + ++++ ++I N ++ K E
Sbjct: 481 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 540
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + D ITY+ V+D+L R R + + ++++ G+ P YN +L
Sbjct: 541 EALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 600
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L K D + +F M +G P+ TY LI+ G ++E+ + +++ + +
Sbjct: 601 FALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C+ G V A+ L+ + + PN +N +L + + + + ++L L+ +L
Sbjct: 498 FCQKGFVEEAMELVNQMMEHGC-TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSL 556
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ Y++ D + + + V + + + N+I+FA K + ++A+ F
Sbjct: 557 DTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFF 616
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++ C P+ TY I+++ L G + + + + GV+
Sbjct: 617 AYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 660
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 123/242 (50%), Gaps = 2/242 (0%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P A Y C++ + ++ + IL+++ + + Y + D T
Sbjct: 304 PTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKV 363
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
E++V I+ N ++ AF K+ +++KAL + ++I+ + P + TY +LD +
Sbjct: 364 WEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVK 423
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + L F +K AG+ P +SYN+LL+ L K R+++ + EM +G+ P+ +
Sbjct: 424 GGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERS 483
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
YTAL + + R G++E++ +F MK++ + I Y +L+ K G + A+ +F+++
Sbjct: 484 YTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQIT 543
Query: 271 SS 272
+
Sbjct: 544 DA 545
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I AGN AA + + +N+ +P YN ++ A + +++ +L +
Sbjct: 208 ISGYASAGNNEAAEHWFEKFKAENL-VPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEG 266
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT F D + L F + + I+ F K+ + KAL
Sbjct: 267 FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKAL 326
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + P+ + Y +++D R G + M AG+ PD ++YN L++
Sbjct: 327 DILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAF 386
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D L + + + P + TYT+++D + + G+I+++L +F+ +K +RP +
Sbjct: 387 CKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGV 446
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SL+ L K +++ A + +EM
Sbjct: 447 VSYNSLLSGLAKARQMENARLMLDEM 472
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 125/265 (47%), Gaps = 9/265 (3%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
KAGN++ A+ +L+ + DK+ PN Y ++ A D +F++ +D++ +
Sbjct: 318 KAGNMAKALDILEEM-DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 376
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y AF + L +E + +I I+ + K I+KAL +FD
Sbjct: 377 VTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDR 436
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYNTLLNNLRK 185
IK +P +++YN +L L + ++ + ML+E M GVVP+ SY L +
Sbjct: 437 IKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDE---MLANGVVPNERSYTALTEGYAR 493
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
++ F+ M + + D++ Y AL+ + ++G ++ ++ +F + ++ +
Sbjct: 494 AGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRIT 553
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +++D + G++ A + ++M
Sbjct: 554 YCTMLDGWARKGELSKARDLLKDMQ 578
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/268 (18%), Positives = 121/268 (45%), Gaps = 1/268 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
I +A ++ AV + + + I L A C +++ A + + + + +
Sbjct: 173 IHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENL 232
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
Y + +A+ + + + ++ + ++ + ++ FA+ R EK L
Sbjct: 233 VPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLS 292
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
F +K P TY ++ + + G + L+ M + GV P+ + Y +++
Sbjct: 293 FFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYA 352
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ + +M +G+KPD++TY L+ +F + G ++++L + +++ ++ P+I
Sbjct: 353 RGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIE 412
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y S++D K G + A+ +F+ + ++
Sbjct: 413 TYTSILDGYVKGGHIQKALEVFDRIKTA 440
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT+ A+ D + EE++ + V II +A + E A F+ K
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 228
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P I YN ++ + G + + A M+E G + Y T+LN +IR +
Sbjct: 229 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEE 288
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
CL +F + G+ P TY ++ F + GN+ ++L + +M + + P+ +Y ++
Sbjct: 289 KCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIM 348
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
D + G A ++E+M S+
Sbjct: 349 DGYARGGDFTAAFKVWEDMVSA 370
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 114/257 (44%), Gaps = 3/257 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ + G+ +AA ++ + + + P+ YN ++ A + +D + +L+++ +
Sbjct: 348 MDGYARGGDFTAAFKVWEDMVSAGL-KPDIVTYNILVHAFCKAGRMDKALGVLENIQANR 406
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + YT+ ++ + L + + ++ N ++ AK+RQ+E A
Sbjct: 407 LLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENAR 466
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L+ D + P+ +Y + + R G V F MK+ + D ++Y LL
Sbjct: 467 LMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKAC 526
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + F+++ ++G+K + +TY ++D + R G + ++ L DM++
Sbjct: 527 CKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDT 586
Query: 244 YVYRSLIDNLKKMGKVD 260
Y S I + G +
Sbjct: 587 ICYTSFIKACFRSGDTE 603
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 113/269 (42%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ CKAG + A+ +L++++ N LP Y +L + I + ++ + +
Sbjct: 383 VHAFCKAGRMDKALGVLENIQ-ANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAG 441
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + ++E++ + + +A++ +EKA
Sbjct: 442 LRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAF 501
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K D++ Y +L + G + + F + +AG+ + I+Y T+L+
Sbjct: 502 GMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGW 561
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L ++M + G D + YT+ I + R+G+ EE M+++++ +
Sbjct: 562 ARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNA 621
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LI D A++ +E+ +S
Sbjct: 622 RTYTTLIHGWLAAADPDQAISCYEQAKAS 650
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 60/135 (44%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
KP L Y +++D R G F +M+ + + P+ Y +L++ + R ++ +
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
EM GI+ + + ++I + GN E + F K + + P VY S++
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247
Query: 255 KMGKVDLAMTIFEEM 269
+ G ++ + +M
Sbjct: 248 QAGNMETVEALLAQM 262
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 138/274 (50%), Gaps = 15/274 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-----ETNDIDLSFQILKDLL 60
IE +C+ G++ AV L +S+ +K + +PN Y ++ + N+ L+F+ ++
Sbjct: 270 IEGMCQVGDIDEAVELKRSMGEKGL-VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK-- 326
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + F+ D ++L + +V P ++I N +I K ++E
Sbjct: 327 -TGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKME 385
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYN 177
KA I + L CKP+ T+ ++++ R +GR ++L+E M++ +VP +SY
Sbjct: 386 KAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDE---MEKRNLVPSAVSYG 442
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N L + L L +M SG+KP+++ Y+ LI ++ G IEE+ RL + M
Sbjct: 443 AMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCS 502
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P I+ Y ++I L K GK++ A T E+
Sbjct: 503 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 536
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
IE C+ N+ A+ LL + +N+ +P+A Y ++ D+ L+ ++L+ + S
Sbjct: 410 IEGYCREHNMGRALELLDEMEKRNL-VPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ A+ + ++ + I N II +K+ ++E+A
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I+G KPD +T+ + + G++ + F M + G++P+ Y L+N
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K L L FR + G+ PD+ T +A I + G ++E+L++F+++K++ + P +
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y SLI K G+V+ A + +EM
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEM 674
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 123/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L KAG + A L ++ + + P+A + ++ ++T + + + ++L
Sbjct: 512 NAIISCLSKAGKMEEASTYLLEIQGRGL-KPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT + + L + + + + I K+ +++
Sbjct: 571 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQ 630
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL +F +K PD+ TY+ ++ + G V M G+ P+ YN L+
Sbjct: 631 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 690
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + F M E G++PD +TY+ +ID + ++ N+ E+ LF++M + ++
Sbjct: 691 DGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 750
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P +VY +L+ K G ++ AM +F EM
Sbjct: 751 PHSFVYNALVHGCCKEGDMEKAMNLFREM 779
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 7/263 (2%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + A RLL + + P+ YN ++ ++ ++ + L L + R L D
Sbjct: 487 GRIEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGKMEEASTYL--LEIQGRGLKPDA 543
Query: 71 YT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
T F + T T+ + +E++ + + +I K+ + +AL IF
Sbjct: 544 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRR 603
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ L PD+ T + + L + GRV + L F+ +KE G+VPD +Y++L++ K
Sbjct: 604 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 663
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ EM GI P++ Y AL+D ++G+I+ + +LF+ M ++ + P Y +
Sbjct: 664 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723
Query: 249 LIDNLKKMGKVDLAMTIFEEMNS 271
+ID K V A ++F EM S
Sbjct: 724 MIDGYCKSENVAEAFSLFHEMPS 746
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 8/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+I K G ++ A + + D + +PN Y ++ + ++ + I + L
Sbjct: 547 GAFILGYSKTGKMTEAAKYFDEMLDHGL-MPNNPLYTVLINGHFKAGNLMEALSIFRRLH 605
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ F + + L E+ + + + +I F K ++E
Sbjct: 606 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 665
Query: 121 KALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
KA + D +KG+ P++ YN ++D L + G + F M E G+ PD ++Y+T
Sbjct: 666 KAFELHDEMCLKGIA--PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K + F EM G++P Y AL+ + G++E+++ LF +M Q+
Sbjct: 724 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + +LID K K+ A +F+EM
Sbjct: 784 FATTL-SFNTLIDGYCKSCKIQEASQLFQEM 813
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 133/306 (43%), Gaps = 39/306 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK+G++ A +L + +K + P++ Y+ ++ ++ ++ +F + ++
Sbjct: 687 NALVDGLCKSGDIQRARKLFDGMPEKGL-EPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y D + + E++Q + + N +I + KS +I+
Sbjct: 746 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQ 804
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + + PD +TY V+D + G++ + F M+E ++ D ++Y +L+
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL------------ 228
K+ + F +M G+KPD +TY +I + + N+ E+
Sbjct: 865 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924
Query: 229 -----------------------RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
+L ++M + ++PS+ +L+ + + GK+D A +
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984
Query: 266 FEEMNS 271
FE + S
Sbjct: 985 FEGVKS 990
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
R ++ L+ D KGL P+ Y++V++ + +VG +++ + SM E G+VP+ +Y
Sbjct: 245 RGAKRVLIEMDE-KGLN--PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTY 301
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ L + +R++ + F EM ++G+KPD +ALID F R G+I+E LR+ + M
Sbjct: 302 TIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS 361
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I ++ Y LI L K GK++ A I + M
Sbjct: 362 CGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 394
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 124/271 (45%), Gaps = 1/271 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
C+ I+ + G++ +R+ + I + YN ++ + ++ + +ILK ++
Sbjct: 336 CSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMV 395
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S + + + + L ++E+ + S + +I + +
Sbjct: 396 TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLS 455
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + + + KP+++ Y+I++ GR+ + M +GV PD YN ++
Sbjct: 456 LANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 515
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K +++ Y E+ G+KPD +T+ A I + +TG + E+ + F++M +
Sbjct: 516 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 575
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ +Y LI+ K G + A++IF +++
Sbjct: 576 PNNPLYTVLINGHFKAGNLMEALSIFRRLHA 606
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 119/269 (44%), Gaps = 38/269 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK G++ A R+L + +K + PN Y+ V+ + DID + ++ + +
Sbjct: 235 VGALCKTGDLRGAKRVLIEMDEKGLN-PNEFIYSLVIEGMCQVGDIDEAVELKRSM--GE 291
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ L + YT I +++++ +A
Sbjct: 292 KGLVPNTYT---------------------------------YTIITAGLCRAKRMNEAK 318
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L F+ ++ KPD + ++D R G ++++L M G+ + I+YN L++ L
Sbjct: 319 LTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGL 378
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +++ + M G KP+ T+ LI+ + R N+ +L L ++M+++ + PS
Sbjct: 379 CKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 438
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y ++I+ L + LA + E+M S
Sbjct: 439 VSYGAMINGLCHCKDLSLANKLLEKMTFS 467
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 119/275 (43%), Gaps = 43/275 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVS- 62
I+ CK+ NV+ A L + K + P++ YN ++ + D++ + + +++L
Sbjct: 725 IDGYCKSENVAEAFSLFHEMPSKGV-QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Query: 63 -SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ TLS + + + +QL F E + + P+ + +I K+ ++E+
Sbjct: 784 FATTLSFNTLIDGYCKSCKIQEASQL--FQEMIAKQIMPDHVTYTT-VIDWHCKAGKMEE 840
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL- 180
A L+F ++ D +TY ++ ++G+ +++ F M GV PD ++Y ++
Sbjct: 841 ANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIY 900
Query: 181 -----NNLRKIRRL----------------DLCLI-------------YFREMGESGIKP 206
+NL + +L DL + EMGE G+KP
Sbjct: 901 AHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKP 960
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L L+ SF G ++E+ R+F +K + P
Sbjct: 961 SLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVP 995
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+I N ++ K +E +++ + K D+ TY ++ L + G +
Sbjct: 192 SLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVL 251
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E G+ P+ Y+ ++ + ++ +D + R MGE G+ P+ TYT + R
Sbjct: 252 IEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRA 311
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ E+ F +M++ ++P +LID + G +D + I + M S
Sbjct: 312 KRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS 361
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 91/182 (50%), Gaps = 9/182 (4%)
Query: 94 VVQIASPESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
VQ+ + E + N ++ ++ S ++ L F + G + ++I++D
Sbjct: 113 AVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGG----SSPVVFDILIDSY 168
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R+G +++ N F K ++ I N+LL +L K ++L + M ++ + D+
Sbjct: 169 KRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDV 228
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TYT L+ + +TG++ + R+ +M ++ + P+ ++Y +I+ + ++G +D A+ +
Sbjct: 229 YTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRS 288
Query: 269 MN 270
M
Sbjct: 289 MG 290
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/217 (17%), Positives = 89/217 (41%), Gaps = 3/217 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK+ + A +L Q + K I +P+ Y V+ + ++ + + K++
Sbjct: 791 NTLIDGYCKSCKIQEASQLFQEMIAKQI-MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 849
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + YT+ + +++ E++V + +I+A K +
Sbjct: 850 ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 909
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D + G +++++ L + + + M E G+ P + NTL+
Sbjct: 910 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ + ++D F + G+ PD T L++
Sbjct: 970 RSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 125/269 (46%), Gaps = 41/269 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
NG+ KAG+V A+ L ++D I + ++N VL I +++++ KD+
Sbjct: 145 NGFF----KAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDM--- 197
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
I SP ++I +I KSR+++KA
Sbjct: 198 --------------------------------SGIFSP-NLISYTIMIDGLCKSRKVDKA 224
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +F + PD++TY ++D LG+ RV + + F + G P ++YNT+++
Sbjct: 225 ITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDG 284
Query: 183 LRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K R++ L + +M E +KPD+ TY+ALI+ + E++ L+ +M P
Sbjct: 285 LCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSP 344
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ Y +L+D L K G D AM IF +M
Sbjct: 345 DVVTYNTLLDGLCKSGCEDKAMEIFRKMG 373
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 40/216 (18%)
Query: 93 EVVQIASPESIIVVNR-----IIFAFAKSRQIEKALLIFD-HIKGLKCKPDLITYNIVLD 146
EV Q A +S NR ++ + K+R++E A L F H+K + +PD ++YN +++
Sbjct: 87 EVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNV-FEPDEVSYNTLMN 145
Query: 147 ILGRVGRVNDMLNEFASMKEAGVV---------------------------------PDF 173
+ G V L F MK++G+ P+
Sbjct: 146 GFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNL 205
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
ISY +++ L K R++D + F++M + I PD++TY ALID G+ ++E+ LF +
Sbjct: 206 ISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEE 265
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + P++ Y ++ID L K G+++ A+T++++M
Sbjct: 266 ARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 19/264 (7%)
Query: 16 SAAVRLLQSLRDKNIFLPNAYNC-----VLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
+ A + Q ++ F N + C V V + D L FQ + +S
Sbjct: 83 NTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVS--- 139
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV----NRIIFAFAKSRQIEKALLIF 126
Y F D + L E+ +S I V N ++ +I A +F
Sbjct: 140 YNTLMNGFFKAGDVKKALALFGEM-----KDSGIAVLRSHNIVLRGLCSGGKISMAWEVF 194
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ G+ P+LI+Y I++D L + +V+ + F M + + PD ++Y L++ L K
Sbjct: 195 KDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQ 253
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYV 245
RR+ F E G P ++TY +ID + G IE +L L++DM ++ ++P ++
Sbjct: 254 RRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFT 313
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L + + A ++EEM
Sbjct: 314 YSALINGLNLSNRGEKAYELYEEM 337
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 12/250 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ LCK G + A+ +L D + P+ + SA N ++LS + K +
Sbjct: 279 NTMIDGLCKCGRIENAL----TLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELY 334
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQ-------LLIFIEEVVQIASPESIIVVNRIIFAFAK 115
L + C + + D + + IF + V ++I +I F K
Sbjct: 335 EEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCK 394
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ A+ + ++G PD +T+ V+ L + R+++ F S+ + PD +
Sbjct: 395 VDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVL 453
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+NT+L KI R+D M +SG P L TYTAL+ F RTG ++L ++++M
Sbjct: 454 FNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMI 513
Query: 236 QQQIRPSIYV 245
+ P ++
Sbjct: 514 EMGFPPERHL 523
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDL- 59
C+ I++LCKAG V +A+ LL+++ + A + +L+ + + I + + L+ +
Sbjct: 52 CHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMN 111
Query: 60 -LVSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+S+R S Y + + Q IF V + + ++ + +I F K
Sbjct: 112 RTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKID 171
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A ++ + L C P++ TYN L+ L R GR+ D + M AG PD I+Y+
Sbjct: 172 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYS 231
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ R+ D F M G +P+ +TY L+ + +E+ LF M ++
Sbjct: 232 TLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 291
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
P Y +L+ +GK++ A+ +F+EM S D
Sbjct: 292 GCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 329
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 127/269 (47%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA V A + ++ + +P+ +Y+ ++ + +++ + ++ K ++
Sbjct: 125 NSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 184
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y F + EE++ +I + +I F+ +R+ +
Sbjct: 185 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHD 244
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + C+P+ +TYN +L L + + ++ F M E G PD ++Y TLL
Sbjct: 245 QAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLL 304
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +++ + F EM G PD++ Y L+ F R G E+ +LF M ++ +
Sbjct: 305 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECK 364
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + +ID L K ++D A+ +FE M
Sbjct: 365 PDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ +++ F +IE+A+ +FD + PD++ YN +L R G+ + F
Sbjct: 298 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQV 357
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE-SGIKPDLLTYTALIDSFGRTG 222
M PD +S+N +++ L K +RLD + F M + G PDL+TY +LI FG G
Sbjct: 358 MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI--FGLCG 415
Query: 223 N--IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ E++++F ++ + ++ P + + L++ + G
Sbjct: 416 EQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PNA YNC+L + + D + ++ + ++ YT F Q +
Sbjct: 260 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEV 319
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E+V ++ N ++ F ++ + +A +F + +CKPD +++NI++D L +
Sbjct: 320 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSK 379
Query: 151 VGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R++D + F M++ G PD ++YN+L+ L +RL + F+E+ + PD
Sbjct: 380 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPH 439
Query: 210 TYTALIDSFGRTGN 223
+ L+++ G+
Sbjct: 440 AFNVLLEAMYAAGH 453
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 38/171 (22%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY----------------------- 176
T + V+ L + GRV+ L+ +M + G PD ++
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
Query: 177 --------------NTLLNNLRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRT 221
N+LLN+L K +++ F M E + PD+++Y+ LID F +
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + +L+ M P++ Y + ++ L + G++ A ++EEM S+
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISA 221
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 1/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ LC+AG V A L + L+D+ + Y+ VL + D+++ + + D++ +
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y++ A+ + L E +V +++ ++ F+ I +A L
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFL 479
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
D ++ P L TY +++ L +V + NDM FA M + G VPD + Y+ +++
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFV 539
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K L + +M + G KP++ TYT+LI+ + E + LF M + + P
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRI 599
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+Y SLI K + A+ IF EM +
Sbjct: 600 LYTSLIACYCKRSNMKAALEIFREMET 626
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 91/182 (50%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F++ + Q P + N +I F Q+ KA+ +FD +K PD+ +Y+I++D L
Sbjct: 270 FLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLC 329
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G V M G+ P+ +SY++LL+ L + R++L F+ + + G K D +
Sbjct: 330 KQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHI 389
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ ++ + ++E L+NDM P Y Y SLI + ++ A+ +FE M
Sbjct: 390 VYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELM 449
Query: 270 NS 271
S
Sbjct: 450 VS 451
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
IF + + + P++++ + II F K+ +++A ++ + KP++ TY +++ L
Sbjct: 515 IFADMIKRGYVPDTVLY-SIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGL 573
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
++ +++ F M G+ PD I Y +L+ K + L FREM G+ D
Sbjct: 574 CHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADS 633
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
YT LI F + ++ + +M + + P++ Y LI K+G AM ++
Sbjct: 634 FVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNS 693
Query: 269 M 269
M
Sbjct: 694 M 694
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 98/242 (40%), Gaps = 3/242 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C + G + A L +R + +P+ Y ++ + N + + I D+
Sbjct: 461 CTILVHGFSNEGLIGEAFLFLDKVRQFGV-VPSLCTYRVIIHGLCKVNKPNDMWGIFADM 519
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y+ F+ D + ++V + +I +I ++
Sbjct: 520 IKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKL 579
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ + +F H+ G PD I Y ++ + + L F M+ G+ D Y L
Sbjct: 580 PEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCL 639
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ K+ +D ++ EM G+ P ++TYT LI + + G+ ++++ ++N M Q I
Sbjct: 640 IGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGI 699
Query: 240 RP 241
P
Sbjct: 700 AP 701
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 22/291 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDID--LSF----- 53
N ++ C+AGN+ LL + ++ F N Y VL AE D + LSF
Sbjct: 240 NSIVQAYCQAGNMETVEALLAQMEEEG-FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLK 298
Query: 54 ------------QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPE 101
IL+++ + + Y + D T E++V
Sbjct: 299 VSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKP 358
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
I++ N ++ AF K+ +++KAL + ++I+ + P + TY +LD + G + L F
Sbjct: 359 DIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVF 418
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+K AG+ P +SYN+LL+ L K R+++ + EM +G+ P YTAL + + RT
Sbjct: 419 DRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYART 478
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G++E++ +F MK++ + I Y +L+ G + A +F+++ +
Sbjct: 479 GDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDA 529
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 131/307 (42%), Gaps = 39/307 (12%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+AGN++ A+ +L+ + DK+ PN Y ++ A D +F++ +D++ +
Sbjct: 302 QAGNMAKALDILEEM-DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 360
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y AF + L +E + +I I+ + K I+KAL +FD
Sbjct: 361 VIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDR 420
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVND---MLNE------------------------- 160
IK +P +++YN +L L + ++ + MLNE
Sbjct: 421 IKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGD 480
Query: 161 -------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
F MK+ + D ++Y LL + F+++ ++G+K + +TY
Sbjct: 481 VEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCT 540
Query: 214 LID-SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++D ++ R G +EE+ L + M++ +P +Y SLI+ G+ + + +M S
Sbjct: 541 MLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKS 600
Query: 273 LSDLAGP 279
S P
Sbjct: 601 SSKQTKP 607
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 19/221 (8%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT+ A+ D + EE++ + V II +A + E A F+ K
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 228
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P I YN ++ + G + + A M+E G + Y T+LN +IR +
Sbjct: 229 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEE 288
Query: 191 LCLIYFR-------------------EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
CL +F EM + G+ P+ + Y ++D + R G+ + +++
Sbjct: 289 KCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVW 348
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
DM ++P I +Y L+ K G++D A+ + E + ++
Sbjct: 349 EDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEAN 389
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 11/254 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+GY+ K GN+ A+ + ++ + P +YN +L A+ ++ + +L ++L
Sbjct: 403 DGYV----KGGNIQKALEVFDRIKTAGL-RPGVVSYNSLLSGLAKARQMENARLMLNEML 457
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ S YT + T D + + + + I+ ++ A S +
Sbjct: 458 ANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMH 517
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLD-ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A +F I K + ITY +LD R GRV + ++M+ G PD + YN+L
Sbjct: 518 GAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSL 577
Query: 180 LNNLRKIRR---LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+N R ++ L + KPD+ TY LI + + G I + LF + +
Sbjct: 578 INAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLAR 637
Query: 237 QQIRPSIYVYRSLI 250
++ P + +L+
Sbjct: 638 LKLVPDATTWTALM 651
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 60/135 (44%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
KP L Y +++D R G F +M+ + + P+ Y +L++ + R ++ +
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
EM GI+ + + ++I + GN E + F K + + P VY S++
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247
Query: 255 KMGKVDLAMTIFEEM 269
+ G ++ + +M
Sbjct: 248 QAGNMETVEALLAQM 262
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
L +F E Q P+ N I A A E+A +F +K C PD +TYN +LD
Sbjct: 173 LELFEEMKAQGIQPDEY-TYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLD 231
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G+ G N+ N M+ AG +P+ ++YN LL+ + + M GI+P
Sbjct: 232 VYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEP 291
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D+ TYT+L+ ++ R G +E+++ ++N M+ P+ + + +LI K M IF
Sbjct: 292 DVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIF 351
Query: 267 EEMNS 271
E+M +
Sbjct: 352 EDMQA 356
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 10 CKAGNV-SAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C +G++ A L ++ N P+ YN +L + + + +LK++ +
Sbjct: 198 CASGSLCEEATELFTQMKSSNC-TPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLP 256
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ Y AF C + +V + ++ A++++ ++E+A+ I+
Sbjct: 257 NIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIY 316
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ ++ C P+ T+N ++ + G+ ++M+ F M+ GV PD +++N+LL K
Sbjct: 317 NQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKN 376
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
L FR M ++G +PD T+ LI+++GR G+ +++L +++ M Q P + +
Sbjct: 377 GMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATF 436
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNSS 272
+L+ L + G+ + A I +E+N S
Sbjct: 437 NTLLAALAREGRWEHAELILDELNRS 462
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIK-GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
I+ + Q KAL +F+ ++ + +PD +T ++L ILGR ++ + F S++E
Sbjct: 52 IMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREE 111
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG-NIEE 226
G D +Y +L++ L + R+ L +F +M E+G +P L+TY +ID +G+ G + E
Sbjct: 112 GYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWEN 171
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L LF +MK Q I+P Y Y + I + A +F +M SS
Sbjct: 172 ILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSS 217
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 9/263 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ KAG + A +L+ + LPN YN +L A + + + +KD +
Sbjct: 227 NALLDVYGKAGWYNEAANVLKEMESAGC-LPNIVTYNELLSAFGRAGLCNAAAE-MKDSM 284
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSR 117
VS + + D YT+ A+ Q + I+ + +P S N +I K++
Sbjct: 285 VS-KGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSF-TFNALIGMHGKNK 342
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ ++IF+ ++ +PD++T+N +L G+ G +++L F MK+AG PD ++N
Sbjct: 343 NFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFN 402
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+ + D L + M ++G PDL T+ L+ + R G E + + +++ +
Sbjct: 403 ILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRS 462
Query: 238 QIRPSIYVYRSLIDNLKKMGKVD 260
+P+ Y S++ G+++
Sbjct: 463 SYKPNDIAYASMLHAYANGGELE 485
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I + K ++KA F ++ +PD++TYN ++ + GR G
Sbjct: 542 NAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMA 601
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
AG PD +SYNT++ + K +L F EM +GI+PD TY + + G E
Sbjct: 602 AGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPE 661
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+L + M + +P YR+L+D K+GK + I + + SS
Sbjct: 662 ALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +AG +AA + S+ K I P+ Y +L A + ++ + +I +
Sbjct: 262 NELLSAFGRAGLCNAAAEMKDSMVSKGI-EPDVFTYTSLLSAYSRAGKVEQAMEIYNQMR 320
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S+ T +S + + +++++ E++ I+ N ++ AF K+
Sbjct: 321 TSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYS 380
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ L +F +K +PD T+NI+++ GR G + L+ + M +AG PD ++NTLL
Sbjct: 381 EVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLL 440
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
L + R + + E+ S KP+ + Y +++ ++ G +E+
Sbjct: 441 AALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEK 486
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I V+ RI+ + Q+ +F ++ D+ Y ++ L R + + L F
Sbjct: 84 TIAVMLRIL---GRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFF 140
Query: 162 ASMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
MKEAG P ++YN +++ +K R + L F EM GI+PD TY I +
Sbjct: 141 EQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACAS 200
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
EE+ LF MK P Y +L+D K G + A + +EM S+
Sbjct: 201 GSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESA 252
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 38/272 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G + A+ LL+ + D N P+ Y ++ + ++++ K++
Sbjct: 306 NALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 364
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L + CYT R + T +I
Sbjct: 365 LRGLALDTVCYTALIRELLQTG-----------------------------------KIP 389
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++ + C PD++T + ++D L + GR+ + F SM+ G+ P+ + Y+ L+
Sbjct: 390 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 449
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R++D L +M ++ PD +TY LID ++G++E + F++M + +
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 509
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P +Y Y LI K G D A +F++M+SS
Sbjct: 510 PDVYTYNILISGFCKAGNTDAACGVFDDMSSS 541
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 39/304 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L KAG + AAVR+ +S+ + + PN Y+ ++ + +D + ++L + +
Sbjct: 133 IDGLSKAGRIGAAVRIFKSMEARGL-APNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 191
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF---------- 113
T + Y + D F +E+++ + N +I F
Sbjct: 192 CTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAS 251
Query: 114 --------------------------AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
AK+++IE+A+ + + I C P + TYN +L+
Sbjct: 252 HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNG 311
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L ++GR+ + ++ + + G PD ++Y +L++ L K +R F+EM G+ D
Sbjct: 312 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 371
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ YTALI +TG I ++ ++ M P + ++ID L K G++ A+ IF+
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 431
Query: 268 EMNS 271
M +
Sbjct: 432 SMEA 435
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 38/262 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G + A+ LL+ + D N P+ Y ++ + ++++ K++
Sbjct: 25 NALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 83
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L + CYT R + T +I
Sbjct: 84 LRGLALDTVCYTALIRELLQTG-----------------------------------KIP 108
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++ + C PD++T + ++D L + GR+ + F SM+ G+ P+ + Y+ L+
Sbjct: 109 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 168
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R++D L +M ++ PD +TY LID ++G++E + F++M + +
Sbjct: 169 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCK 228
Query: 241 PSIYVYRSLIDNLKKMGKVDLA 262
P +Y Y LI K G D A
Sbjct: 229 PDVYTYNILISGFCKAGNTDAA 250
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 124/274 (45%), Gaps = 4/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDL-SFQILKDL 59
N I+ LCK+G+V AA + + P+ YN ++ + + D S + ++
Sbjct: 200 NVLIDGLCKSGDVEAARAFFDEMLEAGC-KPDVYTYNILISGFCKAGNTDAASHSLAQET 258
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ T+ YT + + +E++ +I N ++ K ++
Sbjct: 259 TINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 318
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A+ + I C PD++TY ++D LG+ R + F M G+ D + Y L
Sbjct: 319 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTAL 378
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L + ++ ++ M G PD++T + +ID + G I ++R+F M+ + +
Sbjct: 379 IRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 438
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
P+ VY +LI L K K+D A+ + +M +
Sbjct: 439 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 472
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 83/154 (53%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+IE+A+ + + I C P + TYN +L+ L ++GR+ + ++ + + G PD ++Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ L K +R F+EM G+ D + YTALI +TG I ++ ++ M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + ++ID L K G++ A+ IF+ M +
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 154
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ + +E++ +I N ++ K ++E+A+ + I C PD++TY ++
Sbjct: 4 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 63
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
D LG+ R + F M G+ D + Y L+ L + ++ ++ M G
Sbjct: 64 DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD++T + +ID + G I ++R+F M+ + + P+ VY +LI L K K+D A+ +
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183
Query: 266 FEEMNSSL 273
+M +
Sbjct: 184 LAQMKKAF 191
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 38/200 (19%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L KAG + AAVR+ +S+ + + PN Y+ ++ + +D + ++L +
Sbjct: 414 IDGLSKAGRIGAAVRIFKSMEARGL-APNEVVYSALIHGLCKARKMDCALEMLAQM---- 468
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+AF D I N +I KS +E A
Sbjct: 469 -----------KKAFCTPD--------------------TITYNILIDGLCKSGDVEAAR 497
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
FD + CKPD+ TYNI++ + G + F M + + ++Y L++ L
Sbjct: 498 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGL 557
Query: 184 RKIRRLDLCLIYFREMGESG 203
K R+L +YF+ M E G
Sbjct: 558 CKRRQLTKASLYFQHMKERG 577
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 137/269 (50%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L KAG + A+ + +++ K +P+ YN ++ + +D + ++L+D+ +
Sbjct: 124 MDALGKAGRAAKALEVFSNMQ-KAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM--NR 180
Query: 64 RTLSSDCYTNFARAFIMTDDC---TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + DC T + + C + F + + ++ N ++ K R+ +
Sbjct: 181 KGIMPDCRT-YNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTD 239
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD ++ KC PDL T+ ++D L + GR+ D L + A + + G VP+ YN L+
Sbjct: 240 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALI 299
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + ++D F++M E PD +TYT L+ F R G+ ++ L +M ++
Sbjct: 300 SGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT 359
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y LI +L G+V+ A T+F+EM
Sbjct: 360 PALATYNVLIRSLSMAGQVEDAYTLFKEM 388
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 38/271 (14%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+CN I C+ G + A RLL + A A D+ ++ L D L
Sbjct: 84 VCNTLIHCTCRLGMLRQARRLLHH---------------MTAHAFVLDV-FTYSYLMDAL 127
Query: 61 VSSRTLSS--DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + + ++N +A M D +V N +I K +
Sbjct: 128 GKAGRAAKALEVFSNMQKAGCMPD--------------------TVVYNVLISCLGKQGK 167
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++AL + + + PD TYNIV+D+L GR + F MK PD ++YNT
Sbjct: 168 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 227
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LLN L+K+RR D F EM + PDL T+ LID+ + G +E++L + +
Sbjct: 228 LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 287
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y+Y +LI + G+VD +F++M
Sbjct: 288 HVPNSYIYNALISGFCRSGQVDKGYELFQDM 318
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 35/276 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I CKAG+ A+ + + L+ + PNA +SF L L
Sbjct: 15 NTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNA---------------VSFDTLVIFLC- 58
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+RA T L +E++ + V N +I + + +A
Sbjct: 59 ----------KMSRA-------TDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQA 101
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ H+ D+ TY+ ++D LG+ GR L F++M++AG +PD + YN L++
Sbjct: 102 RRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISC 161
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K ++D L +M GI PD TY +ID G E++ F MK+++ P
Sbjct: 162 LGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPD 221
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
+ Y +L++ LKK+ + D A +F+EM N + DL
Sbjct: 222 VVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDL 257
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 36/173 (20%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV-PDFISYNTLLNNLRKIRRLDLC 192
C PD++ YN ++ + G + L+ F +K+ G P+ +S++TL+ L K+ R
Sbjct: 7 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66
Query: 193 LIYFREMGESGIKP-----------------------------------DLLTYTALIDS 217
L F+EM +G++ D+ TY+ L+D+
Sbjct: 67 LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G+ G ++L +F++M++ P VY LI L K GKVD A+ + E+MN
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 179
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+V++ + + N +I F +S Q++K +F + C PD ITY I++ R G
Sbjct: 283 LVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGH 342
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ + M G P +YN L+ +L +++ F+EM G PD+ TY+A
Sbjct: 343 TSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSA 402
Query: 214 L 214
L
Sbjct: 403 L 403
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 36/139 (25%)
Query: 170 VPDFISYNTL-------------LNNLRKIRRLDLC-----------------------L 193
PD ++YNTL L+ R++++ C L
Sbjct: 8 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
F+EM +G++ D+ LI R G + ++ RL + M ++ Y L+D L
Sbjct: 68 AVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDAL 127
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K G+ A+ +F M +
Sbjct: 128 GKAGRAAKALEVFSNMQKA 146
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC A AV +L + +PNA Y+ VL A + + + +L+ +
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S D Y+ F + + E+ + ++ N II A K+R
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++KA L+ + +PD +TY+ ++ +GR+ + F MK+ G++P+ ++ N+
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNS 375
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L +L K R +F M G KPD+ +Y L+ + G + + LFN MK
Sbjct: 376 FLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNG 435
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I + +V+ LI K G VD AM IF EM
Sbjct: 436 IAANCHVFTILIHAYAKRGMVDDAMLIFTEMQ 467
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 129/294 (43%), Gaps = 33/294 (11%)
Query: 3 NGYIEKLCKAGNVSAAV------------RLLQSLRDKNIFLPN--AYNCVLVASAETND 48
NG++ L +A + SA + R+ + + +P YN ++
Sbjct: 113 NGFLAALARATSSSACITDGPALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARR 172
Query: 49 IDLSFQILK---------DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS 99
DL + D + ++ L CY N T++ +L+ + ++
Sbjct: 173 PDLGLALFGCILRTGLKMDQITANTLLKCLCYAN------RTEEAVNVLL--HRMSELGC 224
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDM 157
+ + + ++ A + ++AL + + +G C PD++ Y+ V+ G
Sbjct: 225 VPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKA 284
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ F M GV PD ++YN +++ L K R +D + R+M G +PD +TY+ +I
Sbjct: 285 CSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHG 344
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ G ++E+ ++F +MK++ + P+I S + +L K G+ A F+ M +
Sbjct: 345 YATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTA 398
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 105/234 (44%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ A + +D + +L+ + + Y+ + + E+
Sbjct: 303 YNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMK 362
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ +I+ N + + K + ++A FD + KPD+ +Y +L G
Sbjct: 363 KRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFA 422
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
DM+ F SMK G+ + + L++ K +D ++ F EM + G+ PD++TY+ +I
Sbjct: 423 DMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F R G + +++ FN M + I+P+ VY S+I G + A + EM
Sbjct: 483 STFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM 536
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPES-IIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y++ + F M + + E++ P I+ + +I + K ++ A IFD
Sbjct: 513 YSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLA 572
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
+ +P +IT+N ++D VG+++ +M+ GV PD ++YNTLL+ K R+
Sbjct: 573 TDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRI 632
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ L FREM G+KP+ +TY ++ R G + + F++M + ++ +Y +
Sbjct: 633 NDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGII 692
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
+ L + D A+ +F+++ +
Sbjct: 693 LGGLCRNNCADEAIILFQKLGT 714
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 53/313 (16%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVASAETNDIDLSFQILKDLL 60
CN ++ LCK G A S+ K P+ ++ C L+ + F + L
Sbjct: 373 CNSFLASLCKHGRSKEAAEFFDSMTAKG-HKPDIFSYCTLLHGYASEGC---FADMIGLF 428
Query: 61 VS--SRTLSSDC--YTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
S S ++++C +T A+ M DD +LIF E Q SP+ ++ + +I F
Sbjct: 429 NSMKSNGIAANCHVFTILIHAYAKRGMVDD--AMLIFTEMQQQGVSPD-VVTYSTVISTF 485
Query: 114 AKSRQIEKALLIFDHI-------------------------------------KGLKCKP 136
++ ++ A+ F+ + KG+ +P
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIP-RP 544
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D++ ++ V++ L + GRV D + F + G P I++N+L++ + ++D
Sbjct: 545 DIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKIL 604
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M G++PD++TY L+D + + G I + L LF +M+++ ++P+ Y ++ L +
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Query: 257 GKVDLAMTIFEEM 269
G+ A F EM
Sbjct: 665 GRTVAARKKFHEM 677
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
I +I N +I + +++KA I D ++ + +PD++TYN +LD + GR+ND
Sbjct: 575 IGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRIND 634
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
L F M+ GV P+ ++Y +L L + R F EM ESG + Y ++
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
R +E++ LF + ++ SI + ++I+ + K+ + + A +F +++S
Sbjct: 695 GLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
EVV + P+ I+ N ++ + K+ +I L +F ++ KP+ +TY I+L L R G
Sbjct: 608 EVVGV-EPD-IVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R +F M E+G Y +L L + D +I F+++G +K +
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+I++ + EE+ LF + + P+ Y +I NL K G V+ A +F M S
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKS 785
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 98/223 (43%), Gaps = 3/223 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G ++ + L + ++ K + PN Y +L + + +++ S T++
Sbjct: 628 KNGRINDGLTLFREMQRKGV-KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV 686
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + + +I +++ + SI ++N +I A K ++ E+A +F
Sbjct: 687 SIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFAT 746
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
I P+ TY +++ L + G V D N F+SM+++G+VP N ++ L +
Sbjct: 747 ISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGE 806
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ Y ++ I + T + ++ F R G +E ++L
Sbjct: 807 IAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 19/279 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC G A +L++ + K F+P+ Y+ V+ ++ +F + +++ + T
Sbjct: 432 LCGVGKFDKAFQLIKEMMRKG-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 490
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
YT +F Q EE+ + +++ +I A+ K++Q+ +A IF
Sbjct: 491 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 550
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM----------------KEAGVV 170
+ C+P+ +TY ++D L + G ++ +A + +
Sbjct: 551 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 610
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ ++Y L++ L K ++D M SG +P+ + Y ALID F + G I+ + +
Sbjct: 611 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 670
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M + PS++ Y SLID + K G++DLAM + +M
Sbjct: 671 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 709
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 16/240 (6%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+DL+ +I ++L ++ L+ NFAR + I+E+++ ++
Sbjct: 403 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 462
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + ++EKA L+F +K + PD+ TY I++D + G + F M+ G
Sbjct: 463 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 522
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P ++Y L++ K +++ F M ++G +P+ +TY AL+D + GNI ++
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582
Query: 229 RLFNDM----------------KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ + + + P++ Y +L+D L K KVD A + + M SS
Sbjct: 583 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 642
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 21/269 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-------AETNDI--------- 49
I+ CKAG + A L + +R L+ + + NDI
Sbjct: 499 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 558
Query: 50 ---DLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
D+++ L D L + +S + +A+ +D F E +P +++
Sbjct: 559 RPNDVTYGALVDGLCKAGNISK-AFEVYAKLIGTSDSADSDFYFPCEDRHTLAP-NVVTY 616
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
++ K+ +++ A + D + C+P+ I Y+ ++D + G+++ F M +
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +P +Y +L++ + K RLDL + +M + P+++TYTA+ID R G E+
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+L+L + M+++ P++ Y +LID L +
Sbjct: 737 ALKLLSLMEEKGCSPNVVTYTALIDGLGQ 765
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 52/233 (22%)
Query: 6 IEKLCKAGNVSAAVRLLQSL---------------RDKNIFLPN--AYNCVLVASAETND 48
++ LCKAGN+S A + L D++ PN Y ++ + +
Sbjct: 569 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 628
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+D + ++L +L SS C N IV +
Sbjct: 629 VDHAHELLDAML------SSGCEPNH-----------------------------IVYDA 653
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K+ +I+ A +F + P + TY ++D + + GR++ + + M +
Sbjct: 654 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 713
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
P+ ++Y +++ L +I + L M E G P+++TYTALID G++
Sbjct: 714 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/348 (19%), Positives = 126/348 (36%), Gaps = 84/348 (24%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + + C+ G + A+ L L+D + P+ YN ++ + +DL F++ K++
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFG-YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMS 236
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE-EVVQIASPESIIVVNRIIFAFAKSRQI 119
S + FA A L IE E ++ + ++ +I ++
Sbjct: 237 ESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDT----VLCTHMISGLMEASYF 292
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLD------ILGRVGRV----------------NDM 157
++A+ ++ C P+++TY +L LG R+ N +
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352
Query: 158 LNEFAS-------------MKEAGVVPDFISYNTLLNN---------------------- 182
++ + + M G P ++ YN + +
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 412
Query: 183 -------------------LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
L + + D +EM G PD TY+ +I
Sbjct: 413 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 472
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+E++ LF +MK + P +Y Y LID+ K G ++ A +FEEM S
Sbjct: 473 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 520
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEF--ASMKEAGVVPDFISYNTLLNNL------R 184
+C+ +T ++V+ +LG V ++ F + ++ G Y+ L + L R
Sbjct: 98 RCR-GFLTDSVVVAVLGAVRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRAR 156
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
RL RE+GE + L+ R G E+L +K RPS
Sbjct: 157 DAERL------LREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKV 210
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +L+ L G+VDL + +EM+ S
Sbjct: 211 TYNALVQVLSSAGQVDLGFRVQKEMSES 238
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 66/166 (39%), Gaps = 5/166 (3%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
++N ++ + +AL +K +P +TYN ++ +L G+V+ M
Sbjct: 176 LLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEM 235
Query: 165 KEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
E+G D + + L ++ R D + RE K D + T +I
Sbjct: 236 SESGFCMDRFTVGCFAHALCKEGRWADALDMIERE----DFKLDTVLCTHMISGLMEASY 291
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++ + M+ P++ YR+L+ K ++ I M
Sbjct: 292 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMM 337
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 144/309 (46%), Gaps = 41/309 (13%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAE-TNDIDLSFQILKDL 59
C I LC++G + A++L + + P+A + LV+S N +D S +L
Sbjct: 147 CQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKA 206
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ--IASPESIIVVNRIIFAFAKSR 117
+ + Y + I ++ E +Q + SP+ + N +I +
Sbjct: 207 SEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPD-VWSFNVVIKGVCRVG 265
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV-------------------------- 151
Q++KAL + + + C PD +T+NI++D L R
Sbjct: 266 QVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTF 325
Query: 152 ----------GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
G++ D + + M +G++P+ ++YN L+N K+ L + +++M
Sbjct: 326 TSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 385
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
PD++T+++LID + R G ++++LR+++DM Q +I+P++Y + +I +L K + D
Sbjct: 386 LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDE 445
Query: 262 AMTIFEEMN 270
A+ + E+N
Sbjct: 446 AIGLLNELN 454
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ +I + K+ ++E A+ +++ + P+ +TYN++++ G+VG + + +
Sbjct: 321 NVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVY 380
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M PD +++++L++ + +LD L + +M + I+P++ T++ +I S +
Sbjct: 381 QQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQ 440
Query: 222 GNIEESLRLFNDMK-QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++ L N++ + I P ++Y +ID L K GKVD A I + M
Sbjct: 441 NRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGM 489
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ VS +L+ L+ + +PN + V+ + ++ + + D++ S
Sbjct: 293 VDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASG 352
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + D + +++ ++ P ++ + +I + + Q++ AL
Sbjct: 353 IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDAL 412
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYNTLL 180
I+ + + +P++ T++I++ L + R ++ +LNE + + P YN ++
Sbjct: 413 RIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPD--IAPQAFIYNPVI 470
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++D + + M E G +PD TYT LI + I E++ F++M +
Sbjct: 471 DVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCS 530
Query: 241 PSIYVYRSLIDNLKKMG---KVDLAMTIFEEMNSSLSDLAGP 279
P I L K G +VD M + SS+ ++ P
Sbjct: 531 PDSITVNCFISCLLKAGMPNEVDHVMRLASGGASSIQEVPSP 572
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 120 EKALLIFD--HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-EAGVVPD--FI 174
AL +F H L P + ++ +L R GR D L F M G PD F+
Sbjct: 124 SSALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFL 183
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S+ L+++ LD + E G + + Y L+ S G + + + LF
Sbjct: 184 SF--LVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERW 241
Query: 235 KQQQI-RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Q ++ P ++ + +I + ++G+V A+ + E MN
Sbjct: 242 IQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMN 278
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q+ +P ++ N +I K + +A + +K + C PD++TYN ++D G+ G +
Sbjct: 188 QLPAP-NVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELE 246
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ M+ G PD ++YN L+N K R++ YF EM G+ +++T++ +
Sbjct: 247 EVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFV 306
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D+F + G + E+++LF M+ + ++P+ Y L+D K G++D A+ + EM
Sbjct: 307 DAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 95/173 (54%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
I ++ N +I + K ++E+ + ++G C+PD++TYN +++ + GR+
Sbjct: 223 IGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMER 282
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
+ FA MK GV+ + ++++T ++ K + + F +M G+KP+ +TYT L+D
Sbjct: 283 AYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVD 342
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G ++++L L N+M QQ + ++ Y L+D L K GKV A +F M
Sbjct: 343 GTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLM 395
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
+++ CK G V A++L +R K + PN Y C++ + + +D + + +++
Sbjct: 305 FVDAFCKNGMVREAMKLFAQMRMKGMK-PNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ 363
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKSRQ 118
L+ YT + E+V ++ I ++ +I +
Sbjct: 364 GVPLNVVTYTVLVDGLCKEGKVAE----AEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
E+AL + +K + D+ Y ++ L + ++++ + M E G+ P+ + Y
Sbjct: 420 SERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTN 479
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K R+ + ++M +SG +P+++TY AL+D + G+I+E++ FN M
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P++ Y +L+D L K G++D A+ + +EM
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEM 570
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 89/169 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + + AF K+ + +A+ +F ++ KP+ +TY ++D + GR++D L
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLT 357
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + GV + ++Y L++ L K ++ FR M +GI+ + L YT LI
Sbjct: 358 NEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVY 417
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
N E +L L ++MK + + + +Y +LI L + K+D A ++ +M+
Sbjct: 418 KNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMD 466
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 36/210 (17%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P ++I N I+ A K+R+ +A+ + + +P+++TY ++D L + G +++ ++
Sbjct: 472 PNNVIYTN-IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAIS 530
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M + G+ P+ +Y L++ L K RLD ++ EM + G+ D + T+L+D
Sbjct: 531 HFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHL 590
Query: 220 RTGN-----------------------------------IEESLRLFNDMKQQQIRPSIY 244
+ GN I+E+ + ++M + I P
Sbjct: 591 KQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAV 650
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
VY LI+ +K+G ++ A + EM S LS
Sbjct: 651 VYNCLINKCQKLGNMEEAAILQNEMESLLS 680
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 130/282 (46%), Gaps = 15/282 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-------AETNDIDLSFQILKD 58
++ CKAG + A+ L + + + L VLV AE D+ F++++
Sbjct: 341 VDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDV---FRLMER 397
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + L YT + + + L + E+ + + +I+ ++
Sbjct: 398 AGIRANEL---LYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQK 454
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A + + + KP+ + Y ++D + + ++ + M ++G P+ ++Y
Sbjct: 455 LDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCA 514
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ L K +D + +F +M + G++P++ YTAL+D + G +++++ L ++M +
Sbjct: 515 LVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKG 574
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM-NSSLS-DLAG 278
+ V SL+D K G + A + +M NS L DL G
Sbjct: 575 MSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYG 616
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 132/266 (49%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK ++ A L + K I P+ YN ++ + ++L D++
Sbjct: 260 NTIIDGLCKYKHMDDAFDLFNKMETKGI-KPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + AF + +E++Q + +I+ N +I F +++
Sbjct: 319 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 378
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IF + C PD++TYN ++ + RV + + F M + G+V + ++YNTL+
Sbjct: 379 EAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 438
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + D+ F++M G+ PD++TY+ L+D + G +E++L +F +++ ++
Sbjct: 439 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 498
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
P+IY Y +I+ + K GKV+ +F
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 137/280 (48%), Gaps = 25/280 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
+ LCK G++ A+ LL+ + + N+ + YN ++ + +D +F + +
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEKGKIEANVVI---YNTIIDGLCKYKHMDDAFDLFNKM-- 282
Query: 62 SSRTLSSD---------CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
++ + D C N+ R D ++LL ++++ +++ N +I A
Sbjct: 283 ETKGIKPDVFTYNSLISCLCNYGR----WSDASRLL---SDMIERKINPNVVTFNSLIDA 335
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
FAK ++ +A +FD + P+++TYN +++ R+++ F M +PD
Sbjct: 336 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 395
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++YNTL+ K +R++ + FREM + G+ + +TY LI + G+ + + ++F
Sbjct: 396 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 455
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M + P I Y L+D L K GK++ A+ +FE + S
Sbjct: 456 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 99/185 (53%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ + ++++V++ + N +I + +A+ + D + C+PDL TY V
Sbjct: 168 SEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 227
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
++ L + G ++ L+ M++ + + + YNT+++ L K + +D F +M GI
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 287
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
KPD+ TY +LI G ++ RL +DM +++I P++ + SLID K GK+ A
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347
Query: 265 IFEEM 269
+F+EM
Sbjct: 348 LFDEM 352
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 133/270 (49%), Gaps = 5/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC G S A RLL + ++ I PN +N ++ A A+ + + ++ +++
Sbjct: 295 NSLISCLCNYGRWSDASRLLSDMIERKIN-PNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + Y + F M D + IF V + P+ ++ N +I F K++++
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD-VVTYNTLIKGFCKAKRV 412
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+ + +F + + +TYN ++ L + G + F M GV PD I+Y+ L
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L K +L+ L+ F + +S ++P++ TY +I+ + G +E+ LF + + +
Sbjct: 473 LDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P++ +Y ++I + G + A +F EM
Sbjct: 533 KPNVIIYTTMISGFCRKGLKEEADALFREM 562
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 99/201 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + + ++ + I+ +V + ++ K I+ AL + ++
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 248
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + +++ YN ++D L + ++D + F M+ G+ PD +YN+L++ L R
Sbjct: 249 KGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWS 308
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+++T+ +LID+F + G + E+ +LF++M Q+ I P+I Y SLI
Sbjct: 309 DASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 368
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A IF M S
Sbjct: 369 NGFCMHDRLDEAQQIFTLMVS 389
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 91/180 (50%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ + P + + ++ F + Q+ AL + + L +PD++T + +L+
Sbjct: 105 EQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 164
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R+++ + M E G PD +++NTL++ L + + M G +PDL TY
Sbjct: 165 KRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 224
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ + G+I+ +L L M++ +I ++ +Y ++ID L K +D A +F +M +
Sbjct: 225 GTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMET 284
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 91/177 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+V+ SII ++++ A AK + + + + + ++ L + TY+I+L+ R
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRS 130
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++ L M + G PD ++ ++LLN +R+ + +M E G KPD +T+
Sbjct: 131 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFN 190
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI E++ L + M + +P ++ Y ++++ L K G +DLA+++ ++M
Sbjct: 191 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 77/152 (50%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ +F + + P +I ++ +L + ++ + + +++ M+ G+ + +Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LLN + +L L L +M + G +PD++T ++L++ + I E++ L + M +
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P + +LI L K A+ + + M
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRM 212
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 134/274 (48%), Gaps = 11/274 (4%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C I CK G A R+++ + D +P+ YN ++ T + ++L D+
Sbjct: 122 CTSLIRGFCKIGKTRKATRIMEIIEDSGA-VPDVITYNVLISGMCSTGRWMDAEKLLADM 180
Query: 60 L---VSSRTLSSDCYTNF-ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+ S ++ + NF R ++ + + +E++ + + + N ++ F K
Sbjct: 181 VRRGCSPSVVTFNILINFLCRKGLLG----RAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+++E+A+ + C PD++TYN +L L + G+V+ + + G P I+
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 296
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNT+++ L K+ + D EM G+KPD++TY++L+ R G ++E+++ F+D++
Sbjct: 297 YNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLE 356
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P+ Y +++ L K K D A+ M
Sbjct: 357 VLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYM 390
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 8/204 (3%)
Query: 72 TNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS-RQIEKALLIFD 127
T+ R F T T+++ IE+ A P+ +I N +I + R ++ L+ D
Sbjct: 123 TSLIRGFCKIGKTRKATRIMEIIED--SGAVPD-VITYNVLISGMCSTGRWMDAEKLLAD 179
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
++ C P ++T+NI+++ L R G + ++ M + G P+ +SYN LL+ K +
Sbjct: 180 MVR-RGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEK 238
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+++ + Y +M G PD++TY L+ + + G ++ ++ L N + + P + Y
Sbjct: 239 KMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYN 298
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
++ID L K+GK D A + +EM +
Sbjct: 299 TVIDGLSKVGKTDQAAKLLDEMRA 322
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 102/218 (46%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ +L+ + T +S Y F + + ++ ++ I+ N ++
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A K +++ A+ + + + C P LITYN V+D L +VG+ + M+ G+ P
Sbjct: 268 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKP 327
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y++L+ L + ++D + +F ++ G+KP+ +TY A++ + + ++
Sbjct: 328 DIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFL 387
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M Q+ +P+ Y LI+ L G A+ + E+
Sbjct: 388 AYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G V AAV LL L K + YN V+ ++ D + ++L ++
Sbjct: 263 NTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM-- 320
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ L D Y++ + + F ++ + + I N I+ K+R+
Sbjct: 321 RAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKT 380
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++A+ ++ CKP +Y I+++ L G + L + GVV
Sbjct: 381 DRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVV 431
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 134/286 (46%), Gaps = 23/286 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVAS------AETNDI-------- 49
I+ CKAG + A +R PN Y +L A + NDI
Sbjct: 494 IDSFCKAGLIEQAQSWFDEMRSAGCS-PNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552
Query: 50 ----DLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV 105
+++ L D L + + C +A+ +D+ F + SP +++
Sbjct: 553 CYPNAITYSALIDGLCKAGEIQKACEV-YAKLIGTSDNIESDFYFEGKDTDTISP-NVVT 610
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
++ K++++ A + D + C+P+ I Y+ ++D +VG ++ F M
Sbjct: 611 YGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMT 670
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ G +P +Y +L++ + K RLDL + +M + P+++TYTA++D +TG E
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETE 730
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++L L + M+++ P++ Y +LID L K GKVD + +F +M +
Sbjct: 731 KALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKT 776
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 110/237 (46%), Gaps = 16/237 (6%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+DL+ ++ +++LV+S L+ NFAR + ++E+++ +
Sbjct: 398 LDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTK 457
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++++++KA L+F +K + PD+ TY I++D + G + + F M+ AG
Sbjct: 458 VITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAG 517
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ ++Y LL+ K ++L F M P+ +TY+ALID + G I+++
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKAC 577
Query: 229 RL----------------FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ F I P++ Y +L++ L K KV A + + M
Sbjct: 578 EVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAM 634
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 5/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCKA VS A LL ++ PN Y+ ++ + +ID + ++ +
Sbjct: 615 VNGLCKAQKVSDAHDLLDAMLAAGC-EPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCG 673
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S YT+ + + ++++ + +++ ++ K+ + EKAL
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKAL 733
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ C P+++TY ++D LG+ G+V+ L F MK G P++++Y L+N+
Sbjct: 734 NLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHC 793
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
LD + EM ++ L Y + F + SL L +M+ P
Sbjct: 794 CAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDTAPIA 851
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
VY LID+ K G+++ A+ + +EM S L
Sbjct: 852 PVYGMLIDSFSKAGRLETALELHKEMMEVSSSL 884
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 41/204 (20%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL-DILGR--------------- 150
N ++ + + A +F+ + C P + YNI + I GR
Sbjct: 345 NSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKV 404
Query: 151 -------------------------VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
VG+ M G VPD +Y ++ L +
Sbjct: 405 YEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQ 464
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+R+D + F+EM + G+ PD+ TYT LIDSF + G IE++ F++M+ P++
Sbjct: 465 AKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVT 524
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +L+ K ++ A IF M
Sbjct: 525 YTALLHAYLKSKQLYQANDIFHRM 548
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 99/275 (36%), Gaps = 47/275 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + + C G A+ L L+D + P+A YN ++ A ++++F++ K++
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFG-YRPSAVTYNALVQVLASAGQVEMAFRVQKEMS 231
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + +FA+A L +E R F
Sbjct: 232 ASGFCMDRSTVGSFAQALCKEGRWGDALDLLE---------------REDF--------- 267
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K D + ++ L N+ ++ M+ +P+ ++Y TLL
Sbjct: 268 --------------KLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLL 313
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K ++L C M G P + +L+ ++ + + +LFN M
Sbjct: 314 TGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCP 373
Query: 241 PSIYVYRSLI------DNLKKMGKVDLAMTIFEEM 269
P VY I + L +DLA ++EEM
Sbjct: 374 PGYVVYNIFIGSICGREELPNPELLDLAEKVYEEM 408
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN AA+RLL+S+ KN PN YN ++ + ++ + I +++
Sbjct: 186 IHGLCKVGNSRAAIRLLRSMVQKNC-EPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKG 244
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y + + + + E+V ++++ ++ A K + A
Sbjct: 245 ISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAH 304
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + +PD++TY ++D +++ F +M G P+ ISY+TL+N
Sbjct: 305 DVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGY 364
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
KI+R+D + F EM + + P+++TY LI G + +++ LF++M P +
Sbjct: 365 CKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDL 424
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
YR L+D L K +D AM + + + S
Sbjct: 425 VTYRILLDYLCKTRHLDQAMAMLKAIEGS 453
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK L+ + D I +PN + ++ A + + ++ ++ D++
Sbjct: 253 NSIIHGLCKFSEWKHVATLMNEMVDSKI-MPNVVIFTTLVDALCKEGMVTIAHDVV-DVM 310
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R + D YT + + + + +V+ ++I + +I + K ++
Sbjct: 311 IQ-RGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQR 369
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+KA+ +F+ + + P+++TYN ++ L VGR+ D + F M +G +PD ++Y
Sbjct: 370 IDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K R LD + + + S + PD+ +Y +ID R G +E + LF+ + +
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
+ P ++ Y +I+ L G + A +F EMN +D P D
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMN---TDGCSPDD 529
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 35/258 (13%)
Query: 47 NDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
N +D F +L + + +T R + + L +++V + +
Sbjct: 123 NRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTY 182
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K A+ + + C+P++ITYN ++D L + +VN+ LN F+ M
Sbjct: 183 GTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIA 242
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES------------------------ 202
G+ P+ +YN++++ L K EM +S
Sbjct: 243 KGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTI 302
Query: 203 -----------GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
G++PD++TYTAL+D ++E+ ++F+ M ++ P++ Y +LI+
Sbjct: 303 AHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLIN 362
Query: 252 NLKKMGKVDLAMTIFEEM 269
K+ ++D AM +FEEM
Sbjct: 363 GYCKIQRIDKAMYLFEEM 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V+ A ++ + + + P+ Y ++ +++D + ++ ++
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGV-EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ + + + EE+ Q +I+ N +I ++ A+
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAI 409
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + PDL+TY I+LD L + ++ + +++ + + PD SYN +++ +
Sbjct: 410 ALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGM 469
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ L+ F + G+ PD+ TYT +I+ G + E+ +LF +M P
Sbjct: 470 CRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDD 529
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y + + + A+ + +EM
Sbjct: 530 CTYNLITRGFLRNNETLSAIQLLQEM 555
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ + P S++ +I+ + A + L + + L D+ T IV++ + R
Sbjct: 65 MLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNR 124
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V+ + A + + G PD ++ TL+ L ++ L F +M G +P+ +TY
Sbjct: 125 VDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGT 184
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI + GN ++RL M Q+ P++ Y ++ID L K +V+ A+ IF EM
Sbjct: 185 LIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEM 240
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + + +I +F +++ + I L +PD T+ ++ L G++ + L+
Sbjct: 106 PSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALH 165
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M G P+ ++Y TL++ L K+ + R M + +P+++TY +ID
Sbjct: 166 LFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLF 225
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + E+L +F++M + I P++ Y S+I L K + T+ EM S
Sbjct: 226 KDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS 278
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 89/227 (39%), Gaps = 35/227 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC G + A+ L + VAS + D+ ++++IL D L
Sbjct: 393 NTLIHGLCHVGRLRDAIALFHEM---------------VASGQIPDL-VTYRILLDYLCK 436
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+R L A A + + + L +P+ I N +I + ++E A
Sbjct: 437 TRHLDQ------AMAMLKAIEGSNL-----------APD-IQSYNIVIDGMCRVGELEAA 478
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F + PD+ TY I+++ L G + + F M G PD +YN +
Sbjct: 479 GDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRG 538
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
+ + +EM G D T T +++ G +++S++
Sbjct: 539 FLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG-LDQSVK 584
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I+ LC + + + LLQ + + I P ++ NC+ +DI + +LK +
Sbjct: 363 NNLIDGLCTSNRLQESCGLLQEMEESGI-EPTSFTNNCIFGCLCRRHDISGALHLLKKMR 421
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T+ + + F+ ++ + I+ + + K ++++
Sbjct: 422 IHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVD 481
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL +F I PD+I YNI++ L + R+ + N M+E G+VP ++YNTL+
Sbjct: 482 QALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLI 541
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K L+ +++ M E +P+++TY+ LI+ G +++L L+N+M ++
Sbjct: 542 DGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCT 601
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
PS Y + I L G+ + A+ EM
Sbjct: 602 PSSIAYMAFIHGLSNCGRPNEALVYLREM 630
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 108/241 (44%), Gaps = 3/241 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+++LCK G A + L + ++ F P+ AY+ L + ++D + ++ +D+
Sbjct: 436 VKELCKHGKEVEACKFLVDMAEEG-FQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQG 494
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + T + + E+ + S + N +I K+ +E+A+
Sbjct: 495 YCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAM 554
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L + + +P++ITY+ +++ L GR +D L + M G P I+Y ++ L
Sbjct: 555 LFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGL 614
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R + L+Y REM E +KPD Y L+++F N + + +M + P +
Sbjct: 615 SNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDL 674
Query: 244 Y 244
+
Sbjct: 675 H 675
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 119/277 (42%), Gaps = 21/277 (7%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSRTLSSD 69
K G V A L++++ +KN+ L C L+ + + +D + + + S T
Sbjct: 147 KWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDIS 206
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y + D + L E+ + +V ++I +F+K E+ F+ +
Sbjct: 207 LYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKE---EELTCFFEEM 263
Query: 130 -KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK----------------EAGVVPD 172
+ + K + YN VL+ L G V+ + ++ +A V P+
Sbjct: 264 HEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPN 323
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+++ ++N L K LDL + FR+M G KPDLL Y LID + ++ES L
Sbjct: 324 STTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQ 383
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+M++ I P+ + + L + + A+ + ++M
Sbjct: 384 EMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKM 420
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
IV+N +I K+ ++ A+ +F + + CKPDL+ YN ++D L R+ +
Sbjct: 329 IVINGLI----KTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQE 384
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+E+G+ P + N + L + + L ++M G P + T+L+ + G
Sbjct: 385 MEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGK 444
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+ + DM ++ +P I Y + +D L K+ +VD A+ +F+++
Sbjct: 445 EVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDI 490
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/282 (18%), Positives = 125/282 (44%), Gaps = 24/282 (8%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
C A+ + + D+ ++ +++A ++ +D + ++++ + + L+
Sbjct: 112 CNMAEFDKALDVFNEIHDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKK 171
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
+ + F+ + L +++ + I + + II ++ ++KAL ++ +
Sbjct: 172 TFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEM 231
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNL----- 183
KG K +PD+ IV ++ + ++ F M E + YN++LN+L
Sbjct: 232 KGFKIQPDV---KIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGS 288
Query: 184 --RKIRRLDLCLI-----------YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+ L I FR G++ + P+ T++ +I+ +TG+++ ++ L
Sbjct: 289 VHKAYHLLQAITIGNCIGDGEIGKLFR--GKAMVPPNSTTFSIVINGLIKTGDLDLAVGL 346
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F DM + +P + +Y +LID L ++ + + +EM S
Sbjct: 347 FRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEES 388
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 128/287 (44%), Gaps = 11/287 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLLVSS 63
I L AG V A L ++ + +PN+Y+ C+L +++ IDL LK++
Sbjct: 37 IRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHG 96
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + + + + L E+ + V + ++ AF+K +++KA
Sbjct: 97 WGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEY-VFSILVLAFSKWGKVDKAC 155
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + ++ + + T+ ++ + RV+ L+ F MK++G PD Y+ ++ L
Sbjct: 156 ELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGL 215
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP-- 241
+ + L + EM I+PD+ T LI SF + EE L F + + + P
Sbjct: 216 CVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSK----EEELTCFFEEMHEDMDPKA 271
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEE--MNSSLSDLAGPKDFKRKA 286
S +Y S++++L G V A + + + + + D K F+ KA
Sbjct: 272 STLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKA 318
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 136/269 (50%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G V A++LL ++ LPN YN ++ + + +++ + ++++++L
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGC-LPNDVTYNVLVNGLSHSGELEQAKELIQEML 252
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S+ Y R + + EE++ + +++ N I++ K ++
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVS 312
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + D + PDL++YN ++ R+G + + FA ++ G+VP ++YNTL+
Sbjct: 313 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLI 372
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L ++ LD+ + EM + G PD+ T+T L+ F + GN+ + LF++M + ++
Sbjct: 373 DGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQ 432
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y + I K+G A + EEM
Sbjct: 433 PDRFAYITRIVGELKLGDPSKAFGMQEEM 461
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 3/252 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ CK GN+ A L + ++ + P+ AY +V + D +F + +++L
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLNRGL-QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARG 465
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + +++++ + II A + + KA
Sbjct: 466 FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKAR 525
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + P ++TY +++ GR+ + F M E GV P+ I+YN L+N L
Sbjct: 526 AVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 585
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K+R++D +F EM GI P+ TYT LI+ G+ +E+LRL+ DM ++I+P
Sbjct: 586 CKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 645
Query: 244 YVYRSLIDNLKK 255
+ +L+ +L K
Sbjct: 646 CTHSALLKHLNK 657
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 50/312 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G VS A +LL + +KN+ +P+ +YN ++ +I +F + +L
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNL-MPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y D + +E+++ + ++ F K +
Sbjct: 358 FRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLP 417
Query: 121 KALLIFDHI--KGLKC---------------------------------KPDLITYNIVL 145
A +FD + +GL+ PDLITYN+ +
Sbjct: 418 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 477
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREM 199
D L ++G + + M G+VPD ++Y ++++ +LRK R + F EM
Sbjct: 478 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAV------FLEM 531
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
GI P ++TYT LI S+ G ++ ++ F +M ++ + P++ Y +LI+ L K+ K+
Sbjct: 532 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 591
Query: 260 DLAMTIFEEMNS 271
D A F EM +
Sbjct: 592 DQAYKFFTEMQA 603
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 35/211 (16%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+V+ +++ N ++ +F K ++++AL + ++ + C P+ +TYN++++ L G
Sbjct: 181 MVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE 240
Query: 154 -------VNDMLN------------------EFASMKEA----------GVVPDFISYNT 178
+ +ML E + EA G VP ++YNT
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L K R+ M + PDL++Y LI + R GNI E+ LF +++ +
Sbjct: 301 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG 360
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ PS+ Y +LID L +MG +D+AM + +EM
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEM 391
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGV 169
+ +AK +EK LL+F + PDL N VL +L D+ E + M E G+
Sbjct: 127 WIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGI 186
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P ++YNT+L++ K ++ L +M + G P+ +TY L++ +G +E++
Sbjct: 187 RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L +M + + S Y Y LI + G++D A + EEM S
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLS 288
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 39/170 (22%)
Query: 139 ITYNIVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
+TY ++LDIL R G + ++ + S+K V D + + LL K L+ CL+
Sbjct: 82 LTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLV 141
Query: 196 F--------------------------------RE----MGESGIKPDLLTYTALIDSFG 219
F RE M E GI+P ++TY ++DSF
Sbjct: 142 FYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFC 201
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G ++E+L+L M++ P+ Y L++ L G+++ A + +EM
Sbjct: 202 KQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEM 251
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 144/309 (46%), Gaps = 41/309 (13%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAE-TNDIDLSFQILKDL 59
C I LC++G + A++L + + P+A + LV+S N +D S +L
Sbjct: 145 CQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKA 204
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ--IASPESIIVVNRIIFAFAKSR 117
+ + Y + I ++ E +Q + SP+ + N +I +
Sbjct: 205 SEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPD-VWSFNVVIKGVCRVG 263
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV-------------------------- 151
Q++KAL + + + C PD +T+NI++D L R
Sbjct: 264 QVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTF 323
Query: 152 ----------GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
G++ D + + M +G++P+ ++YN L+N K+ L + +++M
Sbjct: 324 TSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTR 383
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
PD++T+++LID + R G ++++LR+++DM Q +I+P++Y + +I +L K + D
Sbjct: 384 LRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDE 443
Query: 262 AMTIFEEMN 270
A+ + E+N
Sbjct: 444 AIRLLNELN 452
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ VS +L+ L+ + +PN + V+ + ++ + + D++ S
Sbjct: 291 VDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASG 350
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + D + +++ ++ P ++ + +I + + Q++ AL
Sbjct: 351 IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDAL 410
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYNTLL 180
I+ + + +P++ T++I++ L + R ++ +LNE + + P YN ++
Sbjct: 411 RIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPD--IAPQAFIYNPVI 468
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++D + + M E G +PD TYT LI + I E++ F++M +
Sbjct: 469 DVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCS 528
Query: 241 PSIYVYRSLIDNLKKMG---KVDLAMTIFEEMNSSLSDLAGP 279
P I L K G +VD M + SS+ + P
Sbjct: 529 PDSITVNCFISCLLKAGMPNEVDHVMRLASGGASSIQEFPSP 570
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 120 EKALLIFD--HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-EAGVVPD--FI 174
AL +F H L P + ++ +L R GR D L F M G PD F+
Sbjct: 122 SSALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFL 181
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S+ L+++ LD + E G + + Y L+ S G + + + LF
Sbjct: 182 SF--LVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERW 239
Query: 235 KQQQI-RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Q ++ P ++ + +I + ++G+V A+ + E MN
Sbjct: 240 IQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMN 276
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 137/272 (50%), Gaps = 12/272 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
+GY+ + K + A+RLL+ +++ P+ YNC++ + ++ + +IL D+
Sbjct: 25 HGYLRQKSK---LDHALRLLEVMKESGK-KPDEILYNCLVNGLVNSGRLEAAEKILDDMK 80
Query: 61 VSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + YTN + + T DC +L F E + SP S N +I + +
Sbjct: 81 RDKVSANLVTYTNLIKEYANTGRLQDCRKL--FQEMKDKGESPNS-WTYNALIQGYGRKG 137
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++AL ++D + G+ C D+ TYNI + + G+ G + DM M GV PD ++YN
Sbjct: 138 LFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYN 197
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TLL+ K REM E+G +P++ TY ++ S + ++ E+ +LF ++K +
Sbjct: 198 TLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSK 257
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P+I Y +++ + G A +++EM
Sbjct: 258 GVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEM 289
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 13/272 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I++ G + +L Q ++DK PN+ YN ++ + ++ ++
Sbjct: 95 IKEYANTGRLQDCRKLFQEMKDKGES-PNSWTYNALIQGYGRKGLFKEALELYDEM--DG 151
Query: 64 RTLSSDCYT-NFARAFI----MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D +T N A A + +D +LL +E+ P + N ++ +AK
Sbjct: 152 VGCAKDVHTYNIAIAMYGKRGLLEDMERLL---DEMDTKGVPPDQVTYNTLLDVYAKKSY 208
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
KA I + +P++ TYNI+L + V + F ++K GVVP+ ++Y+
Sbjct: 209 FVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSA 268
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+L+ + + EM E+G P ++ Y+ LI+S+G G +E+L F DM++
Sbjct: 269 MLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSG 328
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I P +Y +L+D K G+ A ++ EM
Sbjct: 329 IVPDTKIYTALMDAYGKAGRCREAELLYFEMT 360
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 86/169 (50%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ E+ + +I N ++ + K + + +A +F+++K P+++TY+ +L + GR
Sbjct: 216 LREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGR 275
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + + M EAG +P I+Y+ L+ + L F++M +SGI PD
Sbjct: 276 HGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKI 335
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
YTAL+D++G+ G E+ L+ +M ++ P Y L+ G++
Sbjct: 336 YTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 1/171 (0%)
Query: 102 SIIVVNRIIFAFAKSR-QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++ II + + + +++ AL + + +K KPD I YN +++ L GR+
Sbjct: 16 TVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKI 75
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
MK V + ++Y L+ RL C F+EM + G P+ TY ALI +GR
Sbjct: 76 LDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGR 135
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G +E+L L+++M ++ Y I K G ++ + +EM++
Sbjct: 136 KGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDT 186
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I+ N ++ S ++E A I D +K K +L+TY ++ GR+ D F
Sbjct: 54 ILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQE 113
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK+ G P+ +YN L+ + L + EM G D+ TY I +G+ G
Sbjct: 114 MKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGL 173
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RL ++M + + P Y +L+D K A I EM +
Sbjct: 174 LEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEA 222
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA V A + ++ + F+P+ +Y+ ++ + +++ + ++ K ++
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y F + EE+V +I + +I F+ +R+ +
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + C+P+ +TYN +L L + + ++ F M E G PD ++Y TLL
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +++ + F EM G PD++ Y L+ F R G E+ +LF M +Q +
Sbjct: 630 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCK 689
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P + +ID L K ++D A+ +FE M
Sbjct: 690 PDTVSHNIMIDGLSKAKRLDDAVEVFERME 719
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 134/278 (48%), Gaps = 4/278 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILK--D 58
C+ I++LCKAG V +A+ LL+++ + A + +L+ + + I + + L+ D
Sbjct: 377 CHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMD 436
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+SSR+ S Y + + Q IF V + + ++ + +I F K
Sbjct: 437 RKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKID 496
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A ++ + L C P++ TYN L+ L R GR+ D + M AG PD I+Y+
Sbjct: 497 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYS 556
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ R+ D F M G +P+ +TY L+ + +E+ LF M ++
Sbjct: 557 TLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 616
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
P Y +L+ +GK++ A+ +F+EM S D
Sbjct: 617 GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 654
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA----YNCVLVASAETNDIDLSFQILKDLLV 61
I +LCKA + A LQ + D+ I ++ YN +L + + + +F I +V
Sbjct: 416 INELCKADKIQEAQEFLQGM-DRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF-STMV 473
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S R+ D Y+ F D+ + ++++ + ++ N + + +I
Sbjct: 474 SERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRI 533
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGVVPDFISYNT 178
A +++ + C PD+ITY+ ++ + R +D +E F +M G P+ ++YN
Sbjct: 534 ADAQGVYEEMVAAGCSPDVITYSTLIHGFS-LARKHDQAHELFETMISRGCRPNAVTYNC 592
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K + D FR+M E G PD +TYT L+ F G IE+++ +F++M +
Sbjct: 593 LLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 652
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y L+ + GK A +F+ M S
Sbjct: 653 HDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVS 685
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ +++ F +IE+A+ +FD + PD++ YN +L R G+ + F
Sbjct: 623 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE-SGIKPDLLTYTALIDSFGRTG 222
M PD +S+N +++ L K +RLD + F M + G PDL+TY +LI FG G
Sbjct: 683 MVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI--FGLCG 740
Query: 223 N--IEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+ E++++F ++ + ++ P + + L++ +K
Sbjct: 741 EQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIK 774
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PNA YNC+L + + D + ++ + ++ YT F Q +
Sbjct: 585 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEV 644
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E+V ++ N ++ F ++ + +A +F + +CKPD +++NI++D L +
Sbjct: 645 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSK 704
Query: 151 VGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R++D + F M++ G PD ++YN+L+ L +RL + F+E+ + PD
Sbjct: 705 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPH 764
Query: 210 TYTALIDS 217
+ L+++
Sbjct: 765 AFNVLLEA 772
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 122/305 (40%), Gaps = 38/305 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQIL-----K 57
++ LCK+G + A +++++ Y+ ++ E+ ID + + +
Sbjct: 309 TAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGR 368
Query: 58 DLLVSSRTLSS-----------DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI--- 103
++ SS T S D + I C + + ++ + I
Sbjct: 369 NIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEA 428
Query: 104 ------------------IVVNRIIFAFAKSRQIEKALLIFDHIKGLKC-KPDLITYNIV 144
N ++ + K++++ +A IF + + PD+++Y+I+
Sbjct: 429 QEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSIL 488
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+D ++ + + M + VP+ +YN LN L + R+ + EM +G
Sbjct: 489 IDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGC 548
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD++TY+ LI F +++ LF M + RP+ Y L+ L K K D A
Sbjct: 549 SPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHE 608
Query: 265 IFEEM 269
+F +M
Sbjct: 609 LFRKM 613
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 42/278 (15%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRT-LSSDCYTNFARAFIMTDDCTQLLI 89
P+A Y+ +++A + ++D +F++ ++ V S+ L++ +T F + Q
Sbjct: 267 PDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFE 326
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+Q + S V + +I +S +I+KA I G +P T + V+ L
Sbjct: 327 ACR-TMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELC 385
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISY--------------------------------- 176
+ GRV+ L+ +M + G PD ++
Sbjct: 386 KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSS 445
Query: 177 ----NTLLNNLRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
N+LLN+L K +++ F M E PD+++Y+ LID F + + + +L+
Sbjct: 446 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLY 505
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M P++ Y + ++ L + G++ A ++EEM
Sbjct: 506 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM 543
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
R +AL F ++ K D+ TYN +LD L R + F M GVVP+ +Y
Sbjct: 108 RDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTY 167
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L+ + R D + +F EM + G KP Y + + TG E R+F +
Sbjct: 168 AVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLE 227
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+++ + + ++L+ N K A +F M S
Sbjct: 228 KRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKS 263
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA---SAETNDIDLSFQILKDLLVSS 63
C G + AV + + K P+ AYNC+L + + + FQ++
Sbjct: 632 FCNVGKIEQAVEVFDEMVSKG-HDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKP 690
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T+S + + DD ++ +E+ SP+ ++ N +IF +++ +A+
Sbjct: 691 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQD-HGCSPD-LVTYNSLIFGLCGEQRLSEAM 748
Query: 124 LIFDHIKGLKCKPDLITYNIVLDIL 148
+F I LK PD +N++L+ +
Sbjct: 749 KVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 81/195 (41%), Gaps = 4/195 (2%)
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
F++ D + +V+ + + ++ A K +++A +F + ++ K
Sbjct: 244 FVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEM-AVESKAP 302
Query: 138 L--ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
L + + L L + G++ +M+E+ + Y+ L+ L + R+D
Sbjct: 303 LNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPV-YDMLIRLLIESGRIDKAEEA 361
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
E+ I+P T ++I + G ++ +L L M ++ P + + LI+ L K
Sbjct: 362 CLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCK 421
Query: 256 MGKVDLAMTIFEEMN 270
K+ A + M+
Sbjct: 422 ADKIQEAQEFLQGMD 436
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 140/275 (50%), Gaps = 11/275 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC +S A RL ++ PNA Y ++ +T +++++ ++ K++L +
Sbjct: 168 IKGLCMEHRISEATRLFLRMQKLGC-TPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDA 226
Query: 64 RTLSSDCYTNFARAFIMTDDCTQL-------LIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+C I+ D ++ +F E Q P+ +I + +I F +
Sbjct: 227 SQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPD-VISYSTLIHGFCCA 285
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +++ +FD + +PD++T+++++D L + G+V + M + G+VP+ I+Y
Sbjct: 286 GKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITY 345
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L++ + L+ F M G++PD ++YT LI+ + +T ++E++ L+N+M Q
Sbjct: 346 NSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQ 405
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P++ Y +L+ L + GKV A +F M +
Sbjct: 406 VGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT 440
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 15/272 (5%)
Query: 10 CKAGNVSA--AVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
CK GN++A A + + P +++N +L A+ N F + ++ ++ L
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAG--L 122
Query: 67 SSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S D +T A + ++ L + +++ +++ +I +I +A
Sbjct: 123 SPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATR 182
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVN-------DMLNEFASMKEAGVVPDFISYN 177
+F ++ L C P+ +TY ++ L + G VN +MLN+ AS P I+Y+
Sbjct: 183 LFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLND-ASQYGVNCKPGVITYS 241
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ L K+ R D F EM G+ PD+++Y+ LI F G ++S LF++M Q
Sbjct: 242 IIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P + + LID L K GKV A + E M
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM 333
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
NR++ AK + +++ ++ PDL T +I+ + L V RV++ L A +
Sbjct: 95 NRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILR 154
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +P+ ++Y TL+ L R+ F M + G P+ +TY LI +TGN+
Sbjct: 155 RGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNI 214
Query: 227 SLRL----FNDMKQQQI--RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+L+L ND Q + +P + Y +ID L K+G+ D A +FEEM +
Sbjct: 215 ALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKA 265
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQS-LRDKNIFLPN------AYNCVLVASAETNDIDLSFQILKD 58
I+ LC+ GNV+ A++L + L D + + N Y+ ++ + D + ++ ++
Sbjct: 203 IKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEE 262
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ Y+ F Q +E+V ++ + +I K +
Sbjct: 263 MKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGK 322
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A + + + P+LITYN ++D VG +N F SM G+ PD ISY T
Sbjct: 323 VTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTT 382
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N K ++ + + EM + G P++ TY L+ + G + ++ +LF MK
Sbjct: 383 LINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + +Y +D L K + AM +F E+ S
Sbjct: 443 VSANSQIYGIFLDGLCKNDCLFEAMELFNELKS 475
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 128/289 (44%), Gaps = 42/289 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G V+ A +LL+ + + I +PN YN ++ D++ + ++ L + S
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGI-VPNLITYNSLIDGFCMVGDLNSARELF--LSMPS 370
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII----------- 110
+ L D YT + T + + E++Q+ ++ ++
Sbjct: 371 KGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGD 430
Query: 111 ----------FAFAKSRQIE--------------KALLIFDHIKGLKCKPDLITYNIVLD 146
+ + + QI +A+ +F+ +K K ++ Y+ ++D
Sbjct: 431 AKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLID 490
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L + G++ F + + G+ PD ++YN +++ K+ ++D I F +M E+G P
Sbjct: 491 GLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTP 550
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
D++ Y L+ F +EE ++L + M Q+ + P+ ++D L K
Sbjct: 551 DIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + AA + + K P+ +N ++ +D ++L ++ +
Sbjct: 333 IDGFCKQNRLDAAEHMFYLMATKGCS-PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT F D ++E+V +++ N ++ + +++ AL
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451
Query: 124 LIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+F ++ K +PD+ TYNI++ L G+ + + M G+VPD
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+YN++++ L K RLD F MG P+++T+T LI+ + + G +++ L LF
Sbjct: 512 TITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 571
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++ I + Y +LI +K+G ++ A+ IF+EM +S
Sbjct: 572 EMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMAS 611
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 132/284 (46%), Gaps = 21/284 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY-------NCVLVASAETNDIDLSFQILKD 58
++ +CK G+ +A+ LL+ + + + PN C++ + + Q+L++
Sbjct: 221 VDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQE 280
Query: 59 LLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+L + +S D Y AF+ + +E++ S I + +I F K
Sbjct: 281 ML-ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQ 339
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++ A +F + C PD+IT+N ++ R RV+D + M EAG+V + I+Y
Sbjct: 340 NRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY 399
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TL++ ++ L+ +EM SG+ P+++T L+D G ++++L +F M++
Sbjct: 400 TTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 459
Query: 237 QQ-----------IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + P + Y LI L GK A ++EEM
Sbjct: 460 SKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 27/271 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVSS 63
I C+ G+++AA LLQ + + PN C +L + + + ++ K + S
Sbjct: 403 IHGFCQVGDLNAAQDLLQEMVSSGV-CPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 461
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
M D + +E VQ N +I + +A
Sbjct: 462 ----------------MDIDASHPFNGVEPDVQ--------TYNILISGLINEGKFLEAE 497
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+++ + PD ITYN V+ L + R+++ F SM P+ +++ TL+N
Sbjct: 498 ELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 557
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+D L F EMG GI + +TY LI F + GNI +L +F +M + P
Sbjct: 558 CKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDT 617
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
R+++ L ++ A+ + E++ S+
Sbjct: 618 ITIRNMLTGLWSKEELKRAVAMLEDLQMSVG 648
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN ++ LC G + A+ + ++++ + + AS N ++ Q ++L+
Sbjct: 434 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDID--------ASHPFNGVEPDVQTY-NILI 484
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S N + F+ ++ EE+ I N +I K ++++
Sbjct: 485 SG-------LINEGK-FLEAEE------LYEEMPHRGIVPDTITYNSVIHGLCKQSRLDE 530
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD + P+++T+ +++ + GRV+D L F M G+V + I+Y TL++
Sbjct: 531 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIH 590
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
RK+ ++ L F+EM SG+ PD +T ++ ++ ++ + D++
Sbjct: 591 GFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q+ P +++ ++ + ++ +A+ + D + +P+ ITY ++D + ++G
Sbjct: 173 QMCKP-NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 231
Query: 156 DMLNEFASMKE-AGVVPDFISY-----NTLLNNLRKIRRLDLCLIYFREMGE-SGIKPDL 208
LN M+E + + P+ + + ++N R +EM E I PD+
Sbjct: 232 SALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDV 291
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+TY ALI++F + G E+ L+++M + I PS Y S+ID K ++D A +F
Sbjct: 292 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
F ++ AL F I L P ++T++ +L L R+++ L+ F M + P+
Sbjct: 123 FCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PN 178
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+++ TL+N L + R+ + M E G++P+ +TY ++D + G+ +L L
Sbjct: 179 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 238
Query: 233 DMKQ-QQIRPSIYVY-----RSLIDNLKKMGKVDLAMTIFEEM 269
M++ I+P++ ++ +I+ G+ A + +EM
Sbjct: 239 KMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEM 281
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
++ I++ ++ L+ F + + G P ++++TLL+ L R+ L F +M
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
KP+++T+T L++ R G + E++ L + M + ++P+ Y +++D + KMG
Sbjct: 175 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230
Query: 260 DLAMTIFEEM 269
A+ + +M
Sbjct: 231 VSALNLLRKM 240
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/116 (18%), Positives = 54/116 (46%)
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ D ++ F M + +P I + L+ + ++ RLD+ + R+M + + ++T
Sbjct: 59 LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+ F + +L F + + P++ + +L+ L ++ A+ +F +M
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 125/236 (52%), Gaps = 2/236 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN VL+A ++ + + + ++L +L + Y RA + L + +
Sbjct: 122 AYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDD 180
Query: 95 VQIAS-PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ A +++ N ++ AF ++ +++ A + ++ +P L+T+N V++ L + GR
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ D F M G+ PD +SYNTL++ K L L F EM + G+ PD++T+T+
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTS 300
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI + R GN+E ++ L M+++ +R + + + +LID + G +D A+ +EM
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 98/170 (57%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S++ N ++ K+ ++E A +FD + PD ++YN ++ + G +++ L F
Sbjct: 224 SLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVF 283
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A M + GVVPD +++ +L++ + + L+ + +M E G++ + T+TALID F R
Sbjct: 284 AEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRN 343
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G ++++L +M++ +I+PS+ Y LI+ K+G++D A + EM +
Sbjct: 344 GFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEA 393
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 34/261 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I +C+AGN+ AV L+ +R++ + + + +F L D
Sbjct: 302 IHAMCRAGNLERAVALVGQMRERGLRMN----------------EFTFTALID------- 338
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
F R + D L+ ++E+ + S++ N +I + K ++++A +
Sbjct: 339 -------GFCRNGFLDD----ALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEAREL 387
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ KPD++TY+ +L ++G + M + GVVPD I+Y++L+ L +
Sbjct: 388 IHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCE 447
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
RRL F +M + G++PD TYT LID + GN++++L L ++M ++ + P +
Sbjct: 448 ERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVT 507
Query: 246 YRSLIDNLKKMGKVDLAMTIF 266
Y LID L K + A +
Sbjct: 508 YSVLIDGLSKSARTKEAQRLL 528
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C+AG V AA RL+ +R+ + P+ +N V+ + ++ + ++ ++
Sbjct: 194 NTLVAAFCRAGEVDAAERLVGVMREGGV-RPSLVTFNTVVNGLCKAGRMEDARKMFDEMA 252
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y + + L E+ Q ++ +I A ++ +E
Sbjct: 253 REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLE 312
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + ++ + + T+ ++D R G ++D L M+E + P + YN L+
Sbjct: 313 RAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLI 372
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K+ R+D EM G+KPD++TY+ ++ + + G+ + + L M ++ +
Sbjct: 373 NGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVV 432
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI L + ++ A +FE+M
Sbjct: 433 PDAITYSSLIRGLCEERRLGDACELFEKM 461
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 118/305 (38%), Gaps = 27/305 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY CK G + A L+ + K + P+ Y+ +L + D D +F++ + +L
Sbjct: 373 NGY----CKLGRMDEARELIHEMEAKGM-KPDVVTYSTILSGYCKIGDTDSAFELNRKML 427
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ R E+++Q+ +I K ++
Sbjct: 428 KKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQ 487
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL + D + PD++TY++++D L + R + + VPD I Y L+
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547
Query: 181 NNLRKIRRLDLCLI---------------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ R + + ++ M + K D Y+ LI R GNI
Sbjct: 548 HCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIM 607
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDLAGPK--- 280
++L + + P+ SL+ L + G A + +E+ SL+D K
Sbjct: 608 KALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALI 667
Query: 281 DFKRK 285
D RK
Sbjct: 668 DLNRK 672
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 96/163 (58%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F Q+ AL + + L +PD +T +++ R RV+D ++ M E
Sbjct: 124 NIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD ++YN ++++L K RR++ L +F+E+G GI+P+++TYTAL++ +G +
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ RL DM +++I P++ Y +L+D K GKV A IFEEM
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 133/266 (50%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK V+ A+ + + K I PN Y ++ + + + ++L+D++
Sbjct: 194 NAIIDSLCKTRRVNDALDFFKEIGRKGI-RPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y+ AF+ + EE+V+++ I+ + +I +I+
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + C PD+++YN +++ + RV D + F M + G+V + ++YNTL+
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++ +D +F +M G+ PD+ TY L+ G +E++L +F DM++ ++
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMD 432
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
I Y ++I + K GKV+ A +F
Sbjct: 433 LDIVTYTTVIQGMCKTGKVEDAWGLF 458
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ C+ VS AV L+ + + + P+ AYN ++ + +T ++ + K++
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIG-YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKG 220
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + + ++++ ++I + ++ AF K+ ++ +A
Sbjct: 221 IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + + PD++TY+ +++ L R+++ F M G PD +SYNTL+N
Sbjct: 281 EIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGF 340
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +R++ + FR+M + G+ + +TY LI F + G+++++ F+ M + P I
Sbjct: 341 CKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDI 400
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ Y L+ L G ++ A+ IFE+M S DL
Sbjct: 401 WTYNILLGGLCDNGLLEKALVIFEDMQKSEMDL 433
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 93/168 (55%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + ++ F + ++ A+ + D + + +PD++ YN ++D L + RVND L+ F
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKE 215
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ G+ P+ ++Y L+N L R + R+M + I P+++TY+AL+D+F + G
Sbjct: 216 IGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGK 275
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ E+ +F +M + I P I Y SLI+ L ++D A +F+ M S
Sbjct: 276 VLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 120/254 (47%), Gaps = 3/254 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC +G + A RLL+ + + I PN Y+ +L A + + + +I ++++ S
Sbjct: 232 VNGLCNSGRWNDAARLLRDMIKRKI-TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y++ + D + + +V ++ N +I F K++++E +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + + +TYN ++ +VG V+ F+ M GV PD +YN LL L
Sbjct: 351 KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
L+ L+ F +M +S + D++TYT +I +TG +E++ LF + + ++P I
Sbjct: 411 CDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDI 470
Query: 244 YVYRSLIDNLKKMG 257
Y +++ L G
Sbjct: 471 VTYTTMMSGLCTKG 484
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 95/177 (53%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+V+ SI+ NR++ A K ++ + + + ++ L + DL T+NIV++
Sbjct: 75 EMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCF 134
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+V+ L+ M + G PD ++ +L+N + R+ + +M E G +PD++ Y
Sbjct: 135 QVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYN 194
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
A+IDS +T + ++L F ++ ++ IRP++ Y +L++ L G+ + A + +M
Sbjct: 195 AIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDM 251
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 81/153 (52%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ A+ +F + + P ++ +N +L + ++ + + +++ M+ G+ D ++N
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N ++ L L +M + G +PD +T +L++ F R + +++ L + M +
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
RP I Y ++ID+L K +V+ A+ F+E+
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIG 217
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 9/175 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I CKA V ++L + + + + YN ++ + D+D + + +
Sbjct: 334 NTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM-- 391
Query: 62 SSRTLSSDCYTNFARAFIMTDD--CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S +S D +T + D+ + L+ E++ + I+ +I K+ ++
Sbjct: 392 DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKV 451
Query: 120 EKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
E A +F + KGLK PD++TY ++ L G +++ + MK+ G++ +
Sbjct: 452 EDAWGLFCSLSLKGLK--PDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+++ + Q +P +++ N II + K+R IEKAL ++ L P Y+ ++
Sbjct: 86 YLKRMPQHCAP-NVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFC 144
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G V+ ++ FA M G PD +++N LL+ L + R++ FR M G KPD++
Sbjct: 145 KTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVV 204
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + ++E++ L MKQ+ + P+ Y +LID+L K ++ A +FE+M
Sbjct: 205 TYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKM 264
Query: 270 NSSLSDLAGP 279
P
Sbjct: 265 AEGPCPCTEP 274
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 131/268 (48%), Gaps = 8/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCKAG ++ A L+ R PN +YN ++ + +I+ + L+++
Sbjct: 68 NNLISCLCKAGMLAEAESYLK--RMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREME 125
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ Y++ ++F T + ++ + +F E + P+ I+ N ++ ++R+I
Sbjct: 126 ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPD-IVNFNVLLSGLWRARKI 184
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A +F + CKPD++TYN ++ L + ++++ + MK+ V P F++Y TL
Sbjct: 185 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 244
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA--LIDSFGRTGNIEESLRLFNDMKQQ 237
+++L K RL F +M E Y+ LI+ + E+ +F +M+ +
Sbjct: 245 IDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGR 304
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
I P++ Y +L++ L K+ AM +
Sbjct: 305 GISPTVVTYNTLLEGLLSTAKLQDAMEL 332
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L F+ E+ ++ P + + I+ +F K+ + KA+ +F + C+PD++ +N++L
Sbjct: 118 LAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSG 177
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L R ++++ F SM G PD ++YNT++ L K ++LD + M + + P
Sbjct: 178 LWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPT 237
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS--LIDNLKKMGKVDLAMTI 265
+TYT LID + ++++ +F M + + Y LI+ L K + A +
Sbjct: 238 FVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEM 297
Query: 266 FEEMNS 271
F+EM
Sbjct: 298 FQEMRG 303
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
R + D Q +EE+ + +I F KS ++ D +
Sbjct: 2 RKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLF 61
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ I YN ++ L + G + + + M + P+ +SYN +++ K R ++ L +
Sbjct: 62 PNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAF 120
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
REM E G P Y++++ SF +TGN+ +++ +F +M + P I + L+ L +
Sbjct: 121 LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 180
Query: 256 MGKVDLAMTIFEEMNS 271
K+ A +F MNS
Sbjct: 181 ARKIHEARELFRSMNS 196
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKAL----LIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
SP +++ N ++ + +++ A+ + D + P++ TY I++ L + +V
Sbjct: 307 SP-TVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPA----PNMFTYEILISSLCKTDQV 361
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ ++M++ G VP + LL+ L + RLD ++EM + + + L
Sbjct: 362 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNIL 421
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+D R G+++E+ M I P + Y L+ L GK D A + EE+
Sbjct: 422 LDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 76/164 (46%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K+R+ +A +F ++G P ++TYN +L+ L ++ D + M +
Sbjct: 281 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQV 340
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ +Y L+++L K +++ M + G P L + L+ R G ++++
Sbjct: 341 PAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAF 400
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L+ +M + + + L+D + + G VD A ++M +
Sbjct: 401 ELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDT 444
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 134/271 (49%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK GN SAA+RLL+S+ KN PN AYN ++ + + + +F + +++ +
Sbjct: 224 MNGLCKVGNTSAAIRLLRSMVQKNC-RPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI--T 280
Query: 64 RTLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ +S D +T + + + C + + E+V +++V + ++ A K I
Sbjct: 281 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 340
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + D + +PD++TY ++D +++ + F +M G VP+ SYN L+N
Sbjct: 341 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 400
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+I+R+D + +M G+ D +TY LI G ++ ++ LF++M P
Sbjct: 401 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 460
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ YR L+D L K + AM + + + S
Sbjct: 461 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 491
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + +N +I +F R++ A + + L C+PD T+N ++ L G++ + L+
Sbjct: 144 PPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALH 203
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F G PD ++Y TL+N L K+ + R M + +P+++ Y +IDS
Sbjct: 204 LFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLC 263
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + E+ LF++M + I P I+ Y SLI L + + T+ EM +S
Sbjct: 264 KDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 316
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I +I +AL +FD G +PD++TY +++ L +VG + + SM +
Sbjct: 186 NTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQ 245
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
P+ I+YNT++++L K R++ F EM GI PD+ TY +LI + +
Sbjct: 246 KNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKH 305
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L N+M +I P++ V+ +++D L K G + +A + + M
Sbjct: 306 VTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 348
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 104/254 (40%), Gaps = 35/254 (13%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+F +L LL + + R + + L ++ + ++ ++
Sbjct: 166 AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMN 225
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
K A+ + + C+P++I YN ++D L + +V + N F+ M G+ P
Sbjct: 226 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP 285
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGES----------------------------- 202
D +YN+L++ L + EM S
Sbjct: 286 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 345
Query: 203 ------GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
G++PD++TYTAL+D ++E++++F+ M + P++ Y LI+ ++
Sbjct: 346 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 405
Query: 257 GKVDLAMTIFEEMN 270
++D AM + E+M+
Sbjct: 406 QRMDKAMGLLEQMS 419
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 7/239 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC LL + + I +PN ++ V+ A + I ++ ++ D++
Sbjct: 291 NSLIHALCNLCEWKHVTTLLNEMVNSKI-MPNVVVFSTVVDALCKEGMIAIAHDVV-DMM 348
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R + D YT + + + + + +V ++ N +I + + ++
Sbjct: 349 IK-RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 407
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++KA+ + + + D +TYN ++ L VGR+ + F M +G +PD ++Y
Sbjct: 408 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 467
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL+ L K L ++ + + S + D+L Y ID R G +E + LF+++ Q
Sbjct: 468 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQ 526
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 135/274 (49%), Gaps = 7/274 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN +AA+RLL+S+ N P+ Y ++ + + + +F + ++
Sbjct: 179 INGLCKVGNTNAAIRLLRSMEQGNC-QPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV--G 235
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ +S D YT+ + + + + +++ +++ + ++ A K +I +
Sbjct: 236 QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITE 295
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + D + +P+++TYN ++D +++ + F +M G P+ ISYNTL+N
Sbjct: 296 AHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLIN 355
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
KI+R+D F EM + + P+ +TY L+ G +++++ LF++M P
Sbjct: 356 GYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIP 415
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ YR L+D L K +D AM + + + S D
Sbjct: 416 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 449
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 97/181 (53%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+ +V ++I N +I + K ++++KA +F+ + + P+ +TYN ++ L V
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GR+ D + F M G +PD +Y LL+ L K LD + + + S + PD+ Y
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
T +ID R G +E + +F+++ + +RP++ Y +I+ L + G +D A +F EM+
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 515
Query: 272 S 272
+
Sbjct: 516 N 516
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 90/176 (51%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ + P S + NR++ + AK++Q + + + PD+ T NI+++ + R
Sbjct: 58 MLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNR 117
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ A + + G+ PD ++ TL+ L ++ L F +M G +P+++TY
Sbjct: 118 PGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT 177
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ + GN ++RL M+Q +P + VY S+ID+L K +V A +F +M
Sbjct: 178 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM 233
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + +N +I +F + A + I L +PD T+ ++ L G++ D L+
Sbjct: 99 PPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALH 158
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M G P+ ++Y TL+N L K+ + + R M + +PD++ YT++IDS
Sbjct: 159 LFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 218
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + E+ LF+ M Q I P I+ Y SLI +L + + T+ +M +S
Sbjct: 219 KDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+I AL +FD + G +P+++TY +++ L +VG N + SM++ PD + Y
Sbjct: 152 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 211
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++++L K R++ F +M GI PD+ TYT+LI S + L N M
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I P + ++ +++D L K GK+ A + + M
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 303
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
Query: 33 PNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+ Y N ++ + N +F +L +L + +T R + L
Sbjct: 100 PDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHL 159
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ +++ +I K A+ + ++ C+PD++ Y ++D L +
Sbjct: 160 FDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 219
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V + N F+ M G+ PD +Y +L+++L + +M S I PD++
Sbjct: 220 DRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVI 279
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ ++D+ + G I E+ + + M + + P++ Y +L+D ++D A+ +F+ M
Sbjct: 280 FSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/266 (18%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G ++ A ++ + + + PN YN ++ +++D + ++ ++ +
Sbjct: 284 VDALCKEGKITEAHDVVDMMIIRGV-EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 342
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + EE+ Q + + N ++ +++ A+
Sbjct: 343 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAI 402
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + PDL TY I+LD L + +++ + +++ + + PD Y +++ +
Sbjct: 403 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 462
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L+ F + G++P++ TYT +I+ R G ++E+ +LF +M P
Sbjct: 463 CRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDG 522
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ L + + A+ + +EM
Sbjct: 523 CTYNTITQGLLQNKEALRAIQLLQEM 548
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 95/234 (40%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C + AV++ ++ N + PN +YN ++ + +D + + +++
Sbjct: 316 NALMDGHCLQSEMDEAVKVFDTMV-HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMC 374
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y + E+V + ++ K ++
Sbjct: 375 QKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLD 434
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + I+G PD+ Y IV+D + R G + + F+++ G+ P+ +Y ++
Sbjct: 435 EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMI 494
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
N L + LD F EM +G PD TY + + +++L +M
Sbjct: 495 NGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 96/172 (55%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ I N ++ A K Q++ A I + P+++TY+ ++D +VGR++D LN
Sbjct: 329 QDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNM 388
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F MK GV D +SYNTLL+ K+ R + L +EM +GI+ D++TY AL+ +G+
Sbjct: 389 FNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGK 448
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E R+F +MK+ ++ P++ Y +LID K G AM +F E +
Sbjct: 449 QYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQA 500
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 42/263 (15%)
Query: 11 KAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
+ G AA RL ++ DK +IF YN +L A + +DL+F+I+ ++ +
Sbjct: 308 RGGLWEAARRLFSAMVDKGIDQDIF---TYNTLLDAVCKGGQMDLAFEIMSEMPTKN--- 361
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
I+ + ++ + +I +AK +++ AL +F
Sbjct: 362 ------------ILPN--------------------VVTYSTMIDGYAKVGRLDDALNMF 389
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ +K L D ++YN +L + ++GR L+ M+ AG+ D ++YN LL K
Sbjct: 390 NEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQ 449
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R D F EM + P+LLTY+ LID + + G +E++ +F + KQ ++ + +Y
Sbjct: 450 YRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLY 509
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+LID L K G V+ ++T+ +EM
Sbjct: 510 SALIDALCKNGLVESSVTLLDEM 532
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLN 159
+++ + +I A+ +S +A+ +FD +K P+L+TYN V+D G+ G ++
Sbjct: 223 KTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVE 282
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M GV PD I++N+LL + + F M + GI D+ TY L+D+
Sbjct: 283 IFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVC 342
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G ++ + + ++M + I P++ Y ++ID K+G++D A+ +F EM
Sbjct: 343 KGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEM 392
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G + A ++ + KNI LPN Y+ ++ A+ +D + + ++
Sbjct: 335 NTLLDAVCKGGQMDLAFEIMSEMPTKNI-LPNVVTYSTMIDGYAKVGRLDDALNMFNEMK 393
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y + Q L +E+ + ++ N ++ + K + +
Sbjct: 394 FLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYD 453
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F+ +K + P+L+TY+ ++D+ + G + + F K+AG+ D + Y+ L+
Sbjct: 454 EVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALI 513
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ L K ++ + EM + GI+P+++TY ++ID+FGR+ + +
Sbjct: 514 DALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQ 558
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
Query: 102 SIIVVNRIIFAFAKSR-QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++ N +I A K + +K + IFD + +PD IT+N +L + R G
Sbjct: 259 NLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRL 318
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F++M + G+ D +YNTLL+ + K ++DL EM I P+++TY+ +ID + +
Sbjct: 319 FSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAK 378
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G ++++L +FN+MK + Y +L+ K+G+ + A+ + +EM ++
Sbjct: 379 VGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENA 430
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLN--EFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
C PD Y +L LG G + EFA +E+G + +++ L ++ +++L
Sbjct: 151 CGPD--DYTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVEL 208
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
F + G + ++ALI ++GR+G E++++F+ MK + P++ Y ++ID
Sbjct: 209 AKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVID 268
Query: 252 NLKKMG 257
K G
Sbjct: 269 ACGKGG 274
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 6/265 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKAG AV+LL +RDK PN YN ++ E +D + ++L+++ V
Sbjct: 87 VDGLCKAGRTKDAVKLLDEMRDKGCS-PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 145
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y +F + D + F+ ++ ++ +I KS ++ A
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKFL---ARMPVTPDVVSYTTVINGLCKSGDLDSAS 202
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + C PD++TY+ ++D + G V + SM + G P+ ++YN+LL L
Sbjct: 203 RMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 262
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ + EM G PD+++Y A ID + ++++ +F+ M ++ P+
Sbjct: 263 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 322
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEE 268
Y L++ L K ++D A+T+ E+
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQ 347
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 98/199 (49%), Gaps = 3/199 (1%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + D Q F+ E+V+ +++ I+ K+ + + A+ + D ++
Sbjct: 48 YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMR 107
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C P++ TYN++++ L ++++ M G PD ++YN+ + L K R+D
Sbjct: 108 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD 167
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ M + PD+++YT +I+ ++G+++ + R+ + M + P + Y SLI
Sbjct: 168 EARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLI 224
Query: 251 DNLKKMGKVDLAMTIFEEM 269
D K G+V+ AM + + M
Sbjct: 225 DGFCKGGEVERAMGLLDSM 243
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 7/270 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I+ LCK V A + L + P+ +Y V+ ++ D+D + ++L +
Sbjct: 154 NSFIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGDLDSASRMLDQMT 209
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y++ F + + + ++ ++++ +++ N ++ A + I
Sbjct: 210 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 269
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA + ++ PD+++YN +D L + RV F M E G P+ SY+ L+
Sbjct: 270 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLV 329
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI- 239
L K + LD + + E D+L YT L+D + G +E+ LF+ + ++I
Sbjct: 330 EELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC 389
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P ++ Y ++D+ K ++D A+ I ++M
Sbjct: 390 EPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+PD T+ I+L L R ++ MKE G VPD YN L++ K +
Sbjct: 6 CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+ EM ++ P ++TYT ++D + G +++++L ++M+ + P+IY Y +++ L
Sbjct: 66 KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125
Query: 254 KKMGKVDLAMTIFEEM 269
+ K+D A + EEM
Sbjct: 126 CEERKLDEAKKMLEEM 141
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 18/276 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCKA V A + + ++ PNA Y+ ++ + ++D + +++
Sbjct: 291 NACIDGLCKAERVKKAKAVFDRMVERGC-TPNASSYSMLVEELCKKKELDDAITLVEQAR 349
Query: 61 VSSRTLSSDCYT----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ + YT + + C ++E +I P+ + N ++ + K
Sbjct: 350 EKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE--KICEPD-VFFYNVMLDSHCKR 406
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
RQI+KAL I + C +++T+NI++ L R++D +M + G +PDF++Y
Sbjct: 407 RQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 465
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TL++ + K + L F E + G PD++TY+ALI EE+ LF +
Sbjct: 466 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-- 523
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ ++I + G DL + +F E+ S
Sbjct: 524 -----DVALWNAMILGYAENGSGDLGLKLFVELIES 554
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 69/161 (42%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ +S Q+EKA + +K + C PD YN ++ + A M +
Sbjct: 16 LLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH 75
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+P ++Y +++ L K R + EM + G P++ TY +++ ++E+
Sbjct: 76 CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAK 135
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +M + P + Y S I L K +VD A M
Sbjct: 136 KMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 176
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 115/274 (41%), Gaps = 5/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L + G++ A +L + + F P+ +YN + + + + + ++
Sbjct: 256 NSLLGALHRLGHIGKAEDMLVEMERRG-FTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T ++ Y+ + + +E+ + I++ ++ K + +
Sbjct: 315 ERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFD 374
Query: 121 KALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A +F + K C+PD+ YN++LD + +++ L M E + +++N L
Sbjct: 375 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNIL 433
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L RL M + G PD +TY L+D+ + G +L LF + +
Sbjct: 434 VHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGC 493
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
P + Y +LI L + A +F +++ +L
Sbjct: 494 VPDVVTYSALITGLVHENMAEEAYLLFTKLDVAL 527
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 104/267 (38%), Gaps = 42/267 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G A L + D+ I P+ YN +L + + ID + QI K +L
Sbjct: 364 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML--E 421
Query: 64 RTLSSDCYTNFARAFIMTDD-----CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R + N + DD T LL ++E + ++ A K +
Sbjct: 422 RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDE----GFIPDFVTYGTLVDAMCKCGK 477
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLD--------------------------ILGRV- 151
AL +F+ C PD++TY+ ++ ILG
Sbjct: 478 SAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAE 537
Query: 152 -GRVNDMLNEFASMKEAGVVPDFISYNTLLNN-LRKIRRLDLCLIYFREMGESGIKPDLL 209
G + L F + E+ V P+ ++ ++ L K L F + G PDL
Sbjct: 538 NGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLF 597
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQ 236
LID F + G++EE+ R+F MKQ
Sbjct: 598 VANTLIDVFAKCGDLEEARRIFYSMKQ 624
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 133/268 (49%), Gaps = 7/268 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK GN SAA+RLL+S+ KN PN AYN ++ + + + +F + +++ ++ +
Sbjct: 265 LCKVGNTSAAIRLLRSMVQKNC-RPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI--TKGI 321
Query: 67 SSDCYTNFARAFIMTDDCT--QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S D +T + + + C + + E+V +++V + ++ A K I A
Sbjct: 322 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHD 381
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + +PD++TY ++D +++ + F +M G VP+ SYN L+N
Sbjct: 382 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC 441
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+I+R+D + +M G+ D +TY LI G ++ ++ LF++M P +
Sbjct: 442 QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV 501
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
YR L+D L K + AM + + + S
Sbjct: 502 TYRILLDYLCKNHHLAEAMVLLKAIEGS 529
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + +N +I +F R++ A + + L C+PD T+N ++ L G++ + L+
Sbjct: 182 PPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALH 241
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F G PD ++Y TL+N L K+ + R M + +P+++ Y +IDS
Sbjct: 242 LFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLC 301
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + E+ LF++M + I P I+ Y SLI L + + T+ EM +S
Sbjct: 302 KDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 354
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I +I +AL +FD G +PD++TY +++ L +VG + + SM +
Sbjct: 224 NTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQ 283
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
P+ I+YNT++++L K R++ F EM GI PD+ TY +LI + +
Sbjct: 284 KNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKH 343
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L N+M +I P++ V+ +++D L K G + +A + + M
Sbjct: 344 VTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 386
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 127/274 (46%), Gaps = 7/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC LL + + I +PN ++ V+ A + I ++ ++ D++
Sbjct: 329 NSLIHALCNLCEWKHVTTLLNEMVNSKI-MPNVVVFSTVVDALCKEGMIAIAHDVV-DMM 386
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R + D YT + + + + + +V ++ N +I + + ++
Sbjct: 387 IK-RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 445
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++KA+ + + + D +TYN ++ L VGR+ + F M +G +PD ++Y
Sbjct: 446 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 505
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K L ++ + + S + D+L Y ID R G +E + LF+++ +
Sbjct: 506 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 565
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++P + Y +I L K G +D A +F +M+ +
Sbjct: 566 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 599
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 112/275 (40%), Gaps = 37/275 (13%)
Query: 33 PNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+ Y N ++ + + +F +L LL + + R + + L
Sbjct: 183 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 242
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ + ++ ++ K A+ + + C+P++I YN ++D L +
Sbjct: 243 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 302
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES-------- 202
+V + N F+ M G+ PD +YN+L++ L + EM S
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 362
Query: 203 ---------------------------GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
G++PD++TYTAL+D ++E++++F+ M
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ P++ Y LI+ ++ ++D AM + E+M+
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 457
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 97/227 (42%), Gaps = 3/227 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
C + AV++ ++ K +PN +YN ++ + +D + +L+ + +
Sbjct: 406 CLRSEMDEAVKVFDTMVHKGC-VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 464
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ Y + E+V ++ ++ K+ + +A+++
Sbjct: 465 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 524
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
I+G D++ YNI +D + R G + + F+++ G+ PD +YN +++ L K
Sbjct: 525 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRG 584
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
LD FR+M E+G D Y +I F R+ + +L +M
Sbjct: 585 LLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEM 631
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 77/166 (46%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N +I +++ A+ +F + PDL+TY I+LD L + + + + +
Sbjct: 466 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 525
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ + + D + YN ++ + + L+ F + G++PD+ TY +I + G
Sbjct: 526 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 585
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E+ +LF M + +Y ++I + + A + +EM
Sbjct: 586 LDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEM 631
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 137/274 (50%), Gaps = 13/274 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+AG + LL + + + +P+ Y+ + + D + L +
Sbjct: 277 LSGLCRAGRMGETSALLDEMASQKM-VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG 335
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF-----AFAKSRQ 118
T+ ++ + ++ C + I E V + + +V R+I+ + ++ +
Sbjct: 336 VTIG-----DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 390
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E A F +K KPD ITYN +++ L + R+ + + M++ GV P ++NT
Sbjct: 391 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 450
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ + +L+ C I EM E+G+KP++++Y +++++F + G I E++ + +DM +
Sbjct: 451 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 510
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P+ VY ++ID + G D A + E+M S+
Sbjct: 511 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 544
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 121/268 (45%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCKA ++ A LL ++D + +N ++ A T ++ F +L ++
Sbjct: 414 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 473
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y + AF + + ++++ + V N II A+ + ++
Sbjct: 474 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 533
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ + +K P ++TYN+++ L ++++ S+ ++PD +SYNTL++
Sbjct: 534 AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLIS 593
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+D L + M + GIK + TY LI G G + E L+ M Q + P
Sbjct: 594 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 653
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S ++ +++ K G A + +EM
Sbjct: 654 SNAIHNIMVEAYSKYGNEIKAEDLRKEM 681
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 5/272 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
C+ + LCK G VS A +LQSL + + YN ++ +T +++ +F +
Sbjct: 343 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM- 401
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
SR + D Y + T + E+ ++ N +I A+ ++ Q
Sbjct: 402 -KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 460
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+EK ++ ++ KP++++Y +++ + G++ + + M V+P+ YN
Sbjct: 461 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 520
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + D I +M +GI P ++TY LI I E+ + N + +
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ P Y +LI G +D A+ + + M+
Sbjct: 581 LIPDAVSYNTLISACCYRGNIDKALDLQQRMH 612
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 129/339 (38%), Gaps = 72/339 (21%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ AG++ AV +L+ + PNA YN V+ + ++ ++
Sbjct: 168 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 227
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y I D +++V + I N ++ ++ ++
Sbjct: 228 ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 287
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA------------------ 162
+ + D + K PD TY+I+ D L R G ML+ F
Sbjct: 288 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILL 347
Query: 163 -----------------SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
S+ AG+VP + YNTL+N + L+ F +M IK
Sbjct: 348 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 407
Query: 206 PDLLTYTA-----------------------------------LIDSFGRTGNIEESLRL 230
PD +TY A LID++GRTG +E+ +
Sbjct: 408 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 467
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++M++ ++P++ Y S+++ K GK+ A+ I ++M
Sbjct: 468 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 506
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 104/238 (43%), Gaps = 3/238 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ + G + +L +++ N PN +Y ++ A + I + IL D+
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y A++ Q I +E++ SI+ N +I QI
Sbjct: 508 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 567
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I + + + PD ++YN ++ G ++ L+ M + G+ +Y+ L+
Sbjct: 568 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 627
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+ L RL+ +++M ++ + P + +++++ + GN ++ L +M Q++
Sbjct: 628 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P L + N++L+ L +GR D+ F + AG PD ++N + L +
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186
Query: 196 FREMGESGI-KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
R MG G P+ +Y +I R G +++ +F++M ++ + P+ Y ++ID
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246
Query: 255 KMGKVDLAMTIFEEM 269
K G ++ + ++M
Sbjct: 247 KGGDLEAGFRLRDQM 261
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G A RLL+ L ++ P+ YN ++ + + + + + +++V
Sbjct: 175 INGLCKTGETKAVARLLRKLEGHSV-KPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG 233
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y F + + + E+ + N +I A K +++ A
Sbjct: 234 ISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAK 293
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + KPD++TYN ++D + +V + F SM ++GV P+ +Y T+++ L
Sbjct: 294 IVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGL 353
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + +D + F EM + PD++TYT+LID + ++E ++ L MK+Q I+P +
Sbjct: 354 CKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 413
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y L+D L K G+++ A F+ +
Sbjct: 414 YSYTILLDALCKGGRLENAKEFFQRL 439
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 133/289 (46%), Gaps = 26/289 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
I+ LCK ++ A+ L + ++++ I P+ Y+ ++ A + ++ + + + LLV
Sbjct: 385 IDGLCKNHHLERAIALCKKMKEQGI-QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKG 443
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L+ Y D + + ++ I II A + + +KA
Sbjct: 444 YHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAE 503
Query: 124 LIFDHI--KGLK--------------------C-KPDLITYNIVLDILGRVGRVNDMLNE 160
I + +GL+ C KPD++TY ++D V +
Sbjct: 504 KILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYV 563
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F SM + GV P+ Y +++ L K + +D + F EM + P+++TYT+LID+ +
Sbjct: 564 FYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCK 623
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E ++ L +MK+ I+P +Y Y L+D L K G+++ A IF+ +
Sbjct: 624 NHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRL 672
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 134/269 (49%), Gaps = 15/269 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCKA A+ L + K +P+A + ++ A E ++ D + +IL++++
Sbjct: 452 NVMINGLCKADLFGEAMDLKSKMEGKGC-MPDAITFKTIICALFEKDENDKAEKILREMI 510
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+R L AR + + L + + ++ P+ ++ ++ + +++
Sbjct: 511 --ARGLQE------ARKVRLKEAKIVLAVMTKACIK---PD-VVTYGTLMDGYFLVNELK 558
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + + P++ Y I++D L + V++ ++ F MK + P+ ++Y +L+
Sbjct: 559 HAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLI 618
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K L+ + +EM E GI+PD+ +YT L+D ++G +E + +F + +
Sbjct: 619 DALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYH 678
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ VY ++I+ L K G D A+ + +M
Sbjct: 679 LNVQVYTAMINELCKAGLFDEALDLQXKM 707
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I +N +I +I+KAL D + + + ++Y +++ L + G +
Sbjct: 134 ITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRK 193
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++ V PD + YNT++++L K + L D C +Y EM GI P+++TY AL+ F G
Sbjct: 194 LEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY-SEMIVKGISPNVVTYNALVYGFCIMG 252
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E+ L N+MK + I P + + +LID L K GK+ A + M
Sbjct: 253 HLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 41/261 (15%)
Query: 47 NDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
I +F +L ++L ++ + + + L F ++VV + +
Sbjct: 112 THITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSY 171
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD-------------------- 146
+I K+ + + + ++G KPD++ YN ++
Sbjct: 172 RTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIV 231
Query: 147 ------------------ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
I+G + +LNE MK + PD ++NTL++ L K +
Sbjct: 232 KGISPNVVTYNALVYGFCIMGHLKEAFSLLNE---MKLKNINPDVCTFNTLIDALGKEGK 288
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ I M ++ IKPD++TY +LID + ++ + +F M Q + P++ Y +
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTT 348
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
+ID L K VD AM++FEEM
Sbjct: 349 MIDGLCKEKMVDEAMSLFEEM 369
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 116/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C G++ A LL ++ KNI P+ +N ++ A + + + +L ++
Sbjct: 242 NALVYGFCIMGHLKEAFSLLNEMKLKNIN-PDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + + + Q ++ +I K + ++
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F+ +K PD++TY ++D L + + + MKE G+ PD SY LL
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K RL+ +F+ + G ++ TY +I+ + E++ L + M+ +
Sbjct: 421 DALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM 480
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P ++++I L + + D A I EM
Sbjct: 481 PDAITFKTIICALFEKDENDKAEKILREM 509
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 77/170 (45%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P N I+ + ++ + +F + PDL T NI+++ + + +
Sbjct: 60 PPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFS 119
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
A++ + G P+ I+ NTL+ L + L + ++ G + + ++Y LI+
Sbjct: 120 VLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLC 179
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+TG + RL ++ ++P + +Y ++I +L K + A ++ EM
Sbjct: 180 KTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEM 229
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 58/138 (42%)
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ FD + ++ P +N +L L +++ F + G PD + N L+N
Sbjct: 47 AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + + + G P+ +T LI G I+++L + + Q +
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166
Query: 242 SIYVYRSLIDNLKKMGKV 259
+ YR+LI+ L K G+
Sbjct: 167 NQVSYRTLINGLCKTGET 184
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC+ V A L + + F PN YN ++ + + + +ILKD +
Sbjct: 369 NTVICGLCRKSRVVEAEECLHKMVNGG-FEPNDFTYNSIIDGYCKKGMVVDANRILKDAV 427
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + F D Q + ++ + SIIV N +I + I
Sbjct: 428 FKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLIL 487
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + + CKPD+ TYN++++ L ++G ++D + G +PD +YNTL+
Sbjct: 488 PALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLV 547
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + +LD + M G+ PD++TY L++ +T EE + +F M ++
Sbjct: 548 DGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCA 607
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+I Y ++I++L KV+ A+ + EM S
Sbjct: 608 PNIITYNTIIESLCNSKKVNEAVDLLGEMKS 638
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLL 60
N I+ CK G V A R+L+ K F P+ + C LV + D D + + KD L
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKG-FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 462
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + L + E+ + I N II K +
Sbjct: 463 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 522
Query: 121 KA-LLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A LI D I KG C PD+ TYN ++D R +++ + M G+ PD I+YNT
Sbjct: 523 DANHLIGDAITKG--CIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNT 580
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LLN L K + + + F+ M E G P+++TY +I+S + + E++ L +MK +
Sbjct: 581 LLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKG 640
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P + + +LI K+G +D A +F M
Sbjct: 641 LTPDVVSFGTLITGFCKVGDLDGAYGLFRGM 671
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N ++ + + +++ A+ + + + PD+ITYN +L+ L + + +++ F
Sbjct: 540 IFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFK 599
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+M E G P+ I+YNT++ +L ++++ + EM G+ PD++++ LI F + G
Sbjct: 600 AMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVG 659
Query: 223 NIEESLRLFNDM-KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+++ + LF M KQ + + Y +I + + +A+ +F EM + D
Sbjct: 660 DLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCD 713
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 133/311 (42%), Gaps = 51/311 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC+ G + A++L+ + +K P+ YN ++ + + + ++ D
Sbjct: 474 NTLIKGLCQQGLILPALQLMNEMAEKGC-KPDIWTYNLIINGLCKMGCLSDANHLIGD-- 530
Query: 61 VSSRTLSSDCYTN-FARAFIMTDDCTQLLI--FIEEVVQIAS---PESIIVVNRIIFAFA 114
++ C + F ++ C QL + IE V ++ S +I N ++
Sbjct: 531 ----AITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ + E+ + IF + C P++ITYN +++ L +VN+ ++ MK G+ PD +
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVV 646
Query: 175 SYNTLLNNLRKIRRLD------------------------------------LCLIYFRE 198
S+ TL+ K+ LD + L F E
Sbjct: 647 SFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSE 706
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M ++G PD TY LID F +TGN+ + + + ++ PS+ + +++ L K
Sbjct: 707 MKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHK 766
Query: 259 VDLAMTIFEEM 269
V A+ I M
Sbjct: 767 VQEAVGIIHLM 777
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ ++L+++ V ++ Y F D + +E+++ + N+++
Sbjct: 244 ALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVH 303
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A K + ++ +FD + P+L T+NI + L + G ++ + + G+ P
Sbjct: 304 ALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRP 363
Query: 172 DFISYNTLLNNL-RKIRRLDL--CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D ++YNT++ L RK R ++ CL +M G +P+ TY ++ID + + G + ++
Sbjct: 364 DVVTYNTVICGLCRKSRVVEAEECL---HKMVNGGFEPNDFTYNSIIDGYCKKGMVVDAN 420
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
R+ D + +P + Y SL++ + G D AM +F++
Sbjct: 421 RILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N I+ + +A ++ +K K + D+ TY I + R GR L
Sbjct: 189 SVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLL 248
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+M G + ++Y T++ + D F EM E + PD+ T+ L+ + +
Sbjct: 249 RNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKK 308
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
G + ES RLF+ + ++ + P+++ + I L K G +D A+ +
Sbjct: 309 GFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 102/274 (37%), Gaps = 39/274 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G +S A L+ K +P+ YN ++ +D + +++ +
Sbjct: 512 INGLCKMGCLSDANHLIGDAITKGC-IPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T Y T +++ + + + +II N II + S+++ +A+
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAV 630
Query: 124 LIFDHIKGLKCKPDLI------------------------------------TYNIVLDI 147
+ +K PD++ TYNI++
Sbjct: 631 DLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISA 690
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ L F+ MK+ G PD +Y L++ K ++ + E E G P
Sbjct: 691 FSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPS 750
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L T+ +++ ++E++ + + M Q+ I P
Sbjct: 751 LTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVP 784
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 36/171 (21%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKE-------AGVV----------------- 170
K L TY +L LG G+ N+M N + M+ GV
Sbjct: 116 KHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAV 175
Query: 171 ------------PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
P SYN ++N L + + + M + ++ D+ TYT I SF
Sbjct: 176 DTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSF 235
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RTG +LRL +M + Y +++ + G D A +F+EM
Sbjct: 236 CRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 39/304 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC-----VLVASAETNDIDLSFQILK 57
N I+ L K+G V A+ L ++ KN PN + VLVA + +D ++
Sbjct: 343 NTMIQALSKSGMVDKAILLFCNMI-KNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSN 401
Query: 58 DLLVSS------RTLSS-----------------------DCYTNFARAFIMTDDCTQLL 88
+ S RTLS D Y + + + +
Sbjct: 402 KFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAI 461
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ +V + ++ N ++ K +Q+ +++ +K PD+ TYNI++ L
Sbjct: 462 ELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSL 521
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
GRVG+V + + F ++ + PD ISYN+L+N L K +D + F EM + G+ PD+
Sbjct: 522 GRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDV 581
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK----VDLAMT 264
+TY+ LI+ FG+T +E + LF+ M Q P+I Y L+D L++ G+ VDL
Sbjct: 582 VTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAK 641
Query: 265 IFEE 268
+ E+
Sbjct: 642 LREQ 645
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 114/250 (45%), Gaps = 37/250 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+E LC+ G A+ LL + +K I YN VL + +
Sbjct: 448 LESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQV--------------- 492
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ L E++ Q I N +I + + ++++A+
Sbjct: 493 --------------------SHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVE 532
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ ++ CKPD+I+YN +++ LG+ G V++ F M++ G+ PD ++Y+TL+
Sbjct: 533 VFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFG 592
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++++ F M G P+++TY L+D R G E++ L+ +++Q + P
Sbjct: 593 KTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSI 652
Query: 245 VYRSLIDNLK 254
Y +++D L+
Sbjct: 653 TY-AILDRLQ 661
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 38/273 (13%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN +L A A+ +D S+++ KD+ + YT R + L EE+
Sbjct: 271 AYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEM 330
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRV 151
+ ++I N +I A +KS ++KA+L+F ++ C+P+ TY+I+L++L G++
Sbjct: 331 LTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQL 390
Query: 152 GRVNDML---NEF-----------------------------ASMKEAGVVPDFISYNTL 179
GR++++L N+F S + G D +Y ++
Sbjct: 391 GRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGG---DRDAYISM 447
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L +L + + + ++ E GI D + Y ++ + G+ + L+ MKQ
Sbjct: 448 LESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGP 507
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I+ Y LI +L ++GKV A+ +FEE+ SS
Sbjct: 508 FPDIFTYNILISSLGRVGKVKEAVEVFEELESS 540
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 9/172 (5%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N ++ A AK Q++++ +F +K C PD TY I++ + G++GR + L F
Sbjct: 269 IFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFE 328
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF---G 219
M G P+ I+YNT++ L K +D ++ F M ++ +P+ TY+ +++ G
Sbjct: 329 EMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEG 388
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ G ++E L + N I SIY Y L+ L K+G A +F M S
Sbjct: 389 QLGRLDEVLEVSNKF----INKSIYAY--LVRTLSKLGHSSEAHRLFCNMWS 434
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A +SR ++A ++ + + D+ YN++LD L + +++ F MK P
Sbjct: 243 AHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNP 302
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D +Y ++ K+ R + L F EM G P+L+ Y +I + ++G +++++ LF
Sbjct: 303 DEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLF 362
Query: 232 NDMKQQQIRPSIYVYRSLIDNL---KKMGKVDLAMTI 265
+M + RP+ + Y +++ L ++G++D + +
Sbjct: 363 CNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEV 399
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 138/274 (50%), Gaps = 13/274 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+AG + LL + + + +P+ Y+ + + D + L +
Sbjct: 92 LSGLCRAGRMGETSALLDEMASQKM-VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG 150
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFI-EEVVQIASPESII----VVNRIIFAFAKSRQ 118
T+ ++ + ++ C + I EEV+Q ++ + N +I + ++ +
Sbjct: 151 VTIG-----DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 205
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E A F +K KPD ITYN +++ L + R+ + + M++ GV P ++NT
Sbjct: 206 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 265
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ + +L+ C I EM E+G+KP++++Y +++++F + G I E++ + +DM +
Sbjct: 266 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 325
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P+ VY ++ID + G D A + E+M S+
Sbjct: 326 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 359
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 121/268 (45%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCKA ++ A LL ++D + +N ++ A T ++ F +L ++
Sbjct: 229 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 288
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y + AF + + ++++ + V N II A+ + ++
Sbjct: 289 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 348
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ + +K P ++TYN+++ L ++++ S+ ++PD +SYNTL++
Sbjct: 349 AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLIS 408
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+D L + M + GIK + TY LI G G + E L+ M Q + P
Sbjct: 409 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 468
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S ++ +++ K G A + +EM
Sbjct: 469 SNAIHNIMVEAYSKYGNEIKAEDLRKEM 496
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 5/272 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
C+ + LCK G VS A +LQSL + + YN ++ +T +++ +F +
Sbjct: 158 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM- 216
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
SR + D Y + T + E+ ++ N +I A+ ++ Q
Sbjct: 217 -KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 275
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+EK ++ ++ KP++++Y +++ + G++ + + M V+P+ YN
Sbjct: 276 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 335
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + D I +M +GI P ++TY LI I E+ + N + +
Sbjct: 336 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ P Y +LI G +D A+ + + M+
Sbjct: 396 LIPDAVSYNTLISACCYRGNIDKALDLQQRMH 427
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ +YN+V+ + R GR D + F M E V+P+ I+YNT+++ K L+
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+M G+KP+ +TY L+ R G + E+ L ++M Q++ P + Y L D L +
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 256 MGKVDLAMTIF 266
G +++F
Sbjct: 133 NGDSKAMLSLF 143
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 116/309 (37%), Gaps = 72/309 (23%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PNA YN V+ + ++ ++ + + Y I D
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++V + I N ++ ++ ++ + + D + K PD TY+I+ D L R
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 151 VGRVNDMLNEFA-----------------------------------SMKEAGVVPDFIS 175
G ML+ F S+ AG+VP +
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA---------------------- 213
YNTL+N + L+ F +M IKPD +TY A
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Query: 214 -------------LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
LID++GRTG +E+ + ++M++ ++P++ Y S+++ K GK+
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312
Query: 261 LAMTIFEEM 269
A+ I ++M
Sbjct: 313 EAVAILDDM 321
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
A P + N +I ++ + A+ +FD + P+ ITYN ++D + G +
Sbjct: 10 APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 69
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M G+ P+ I+YN LL+ L + R+ EM + PD TY+ L D
Sbjct: 70 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 129
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
R G+ + L LF + + Y L++ L K GKV +A + + +
Sbjct: 130 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 181
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 104/238 (43%), Gaps = 3/238 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ + G + +L +++ N PN +Y ++ A + I + IL D+
Sbjct: 264 NTLIDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 322
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y A++ Q I +E++ SI+ N +I QI
Sbjct: 323 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 382
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I + + + PD ++YN ++ G ++ L+ M + G+ +Y+ L+
Sbjct: 383 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 442
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+ L RL+ +++M ++ + P + +++++ + GN ++ L +M Q++
Sbjct: 443 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ P+ SYN ++ + + R + F EM E + P+ +TY +ID + G++
Sbjct: 7 RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDL 66
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
E RL + M ++P+ Y L+ L + G++ + +EM S
Sbjct: 67 EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMAS 113
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 138/274 (50%), Gaps = 13/274 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+AG + LL + + + +P+ Y+ + + D + L +
Sbjct: 140 LSGLCRAGRMGETSALLDEMASQKM-VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG 198
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFI-EEVVQIASPESII----VVNRIIFAFAKSRQ 118
T+ ++ + ++ C + I EEV+Q ++ + N +I + ++ +
Sbjct: 199 VTIG-----DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 253
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E A F +K KPD ITYN +++ L + R+ + + M++ GV P ++NT
Sbjct: 254 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 313
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ + +L+ C I EM E+G+KP++++Y +++++F + G I E++ + +DM +
Sbjct: 314 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 373
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P+ VY ++ID + G D A + E+M S+
Sbjct: 374 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 407
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 121/268 (45%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCKA ++ A LL ++D + +N ++ A T ++ F +L ++
Sbjct: 277 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 336
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y + AF + + ++++ + V N II A+ + ++
Sbjct: 337 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 396
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ + +K P ++TYN+++ L ++++ S+ ++PD +SYNTL++
Sbjct: 397 AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLIS 456
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+D L + M + GIK + TY LI G G + E L+ M Q + P
Sbjct: 457 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 516
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S ++ +++ K G A + +EM
Sbjct: 517 SNAIHNIMVEAYSKYGNEIKAEDLRKEM 544
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 5/272 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
C+ + LCK G VS A +LQSL + + YN ++ +T +++ +F +
Sbjct: 206 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM- 264
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
SR + D Y + T + E+ ++ N +I A+ ++ Q
Sbjct: 265 -KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 323
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+EK ++ ++ KP++++Y +++ + G++ + + M V+P+ YN
Sbjct: 324 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 383
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + D I +M +GI P ++TY LI I E+ + N + +
Sbjct: 384 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ P Y +LI G +D A+ + + M+
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMH 475
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 129/339 (38%), Gaps = 72/339 (21%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ AG++ AV +L+ + PNA YN V+ + ++ ++
Sbjct: 31 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 90
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y I D +++V + I N ++ ++ ++
Sbjct: 91 ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 150
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA------------------ 162
+ + D + K PD TY+I+ D L R G ML+ F
Sbjct: 151 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILL 210
Query: 163 -----------------SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
S+ AG+VP + YNTL+N + L+ F +M IK
Sbjct: 211 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 270
Query: 206 PDLLTYTA-----------------------------------LIDSFGRTGNIEESLRL 230
PD +TY A LID++GRTG +E+ +
Sbjct: 271 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 330
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++M++ ++P++ Y S+++ K GK+ A+ I ++M
Sbjct: 331 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 369
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 104/238 (43%), Gaps = 3/238 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ + G + +L +++ N PN +Y ++ A + I + IL D+
Sbjct: 312 NTLIDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 370
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y A++ Q I +E++ SI+ N +I QI
Sbjct: 371 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 430
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I + + + PD ++YN ++ G ++ L+ M + G+ +Y+ L+
Sbjct: 431 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 490
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+ L RL+ +++M ++ + P + +++++ + GN ++ L +M Q++
Sbjct: 491 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI-KPDLL 209
+GR D+ F + AG PD ++N + L + R MG G P+
Sbjct: 5 LGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 64
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y +I R G +++ +F++M ++ + P+ Y ++ID K G ++ + ++M
Sbjct: 65 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 10/275 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQIL 56
+C I LC+ G S A R+L++ ++F AYN ++ +D + +++
Sbjct: 77 LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVF---AYNTLVAGYCRYGHLDAARRLI 133
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ V+ + YT R L ++++++ +++ ++ A K+
Sbjct: 134 GSMPVAPDAYT---YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKN 190
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
E+A+ + D ++ C P+++TYN++++ + R GRV+D + + G PD +SY
Sbjct: 191 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSY 250
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TLL L +R D F EM E P+ +T+ LI F R G +E ++++ M +
Sbjct: 251 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTE 310
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + + +I+++ K G+VD A M S
Sbjct: 311 HECATNTTLCNIVINSICKQGRVDDAFKFLNNMGS 345
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E +CK A+ +L +R K PN YN ++ +D + +L L
Sbjct: 184 LEAMCKNSGFEQAMAVLDEMRAKGC-TPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242
Query: 64 RTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT + + DD +L F E + + P + + +I F + +E
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEEL--FAEMMEKNCMPNEV-TFDMLIRFFCRGGMVE 299
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + +C + NIV++ + + GRV+D +M G PD ISY T+L
Sbjct: 300 RAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVL 359
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + R + +EM + P+ +T+ I + G IE+++ L M++
Sbjct: 360 KGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCT 419
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +L++ G +D A+ +F M
Sbjct: 420 VGVVTYNALVNGFCVQGHIDSALELFRSM 448
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 132/306 (43%), Gaps = 35/306 (11%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN I +CK G V A + L ++ P+ +Y VL + + ++LK+
Sbjct: 319 LCNIVINSICKQGRVDDAFKFLNNMGSYGCN-PDTISYTTVLKGLCRAERWNDAKELLKE 377
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ ++ + + F Q ++ IE++ + ++ N ++ F
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437
Query: 119 IEKALLIFDH-------------IKGL-------------------KCKPDLITYNIVLD 146
I+ AL +F + GL C P+++T+N++++
Sbjct: 438 IDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVN 497
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G +++ + M E G P+ I+YNTL + + K + L + G+ P
Sbjct: 498 FFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSP 557
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D++T++++I + +EE++++F+ + +RP VY ++ L K ++D A+
Sbjct: 558 DVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFL 617
Query: 267 EEMNSS 272
M S+
Sbjct: 618 AYMVSN 623
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N +I LC+ G + A+ L++ +++ + YN ++ ID + ++ + +
Sbjct: 391 NTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPC 450
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T++ YT + + E++ P +++ N ++ F + +++
Sbjct: 451 KPNTIT---YTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDE 507
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + + C P+LITYN + D + + D L + GV PD I++++++
Sbjct: 508 AIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 567
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K R++ + F + G++P L Y ++ + I+ ++ M P
Sbjct: 568 ILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMP 627
Query: 242 SIYVYRSLIDNLKKMG 257
+ Y LI+ L + G
Sbjct: 628 NESTYIILIEGLAREG 643
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 120/307 (39%), Gaps = 47/307 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC-----VLVASAETNDIDLSFQILK 57
N + C+ G++ AA RL+ S+ P+AY VL D + +L
Sbjct: 114 NTLVAGYCRYGHLDAARRLIGSMP----VAPDAYTYTPLIRVLCDRGRVAD---ALSLLD 166
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
D+L + YT A Q + ++E+ +I+ N II +
Sbjct: 167 DMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 226
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY- 176
+++ A + + + C+PD ++Y +L L R +D+ FA M E +P+ +++
Sbjct: 227 RVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 286
Query: 177 ----------------------------------NTLLNNLRKIRRLDLCLIYFREMGES 202
N ++N++ K R+D + MG
Sbjct: 287 MLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSY 346
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G PD ++YT ++ R ++ L +M + P+ + + I L + G ++ A
Sbjct: 347 GCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQA 406
Query: 263 MTIFEEM 269
+ + E+M
Sbjct: 407 IMLIEQM 413
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ ++ L R GR +D + + +G D +YNTL+ + LD
Sbjct: 73 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD---AA 129
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
R +G + PD TYT LI G + ++L L +DM ++ +P++ Y L++ + K
Sbjct: 130 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189
Query: 256 MGKVDLAMTIFEEMNS 271
+ AM + +EM +
Sbjct: 190 NSGFEQAMAVLDEMRA 205
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 36/203 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---------- 152
+ +I AF + + +A+++F ++ + CKP LITYN++L++ G++G
Sbjct: 200 VYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLV 259
Query: 153 ----------------------RVNDMLNEFAS----MKEAGVVPDFISYNTLLNNLRKI 186
R ++ E A MK AG PD ++YN LL+ K
Sbjct: 260 DRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKS 319
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
RR + +EM +G P ++TY +LI ++ R G +E++L L N M ++ I+P ++ Y
Sbjct: 320 RRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTY 379
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+L+ +K GK A+ IFEEM
Sbjct: 380 TTLLSGFEKAGKDKAAVQIFEEM 402
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ + N ++ + KSR+ ++A+ + ++G C P ++TYN ++ R G + D L
Sbjct: 303 SPDKV-TYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDAL 361
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M E G+ PD +Y TLL+ K + + F EM G KP++ T+ ALI
Sbjct: 362 ELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMH 421
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G G E +++F D+K Q P I + +L+ + G +F+EM
Sbjct: 422 GNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEM 472
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 128/273 (46%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K+ A+ +LQ + + N P+ YN ++ A A ++ + ++ ++
Sbjct: 310 NALLDVYGKSRRSKEAMEVLQEM-EGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMV 368
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
YT F + EE+ +I N +I +
Sbjct: 369 EKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFT 428
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ + +F+ IK +C PD++T+N +L + G+ G +++ F MK AG VP+ ++NTL+
Sbjct: 429 EMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 488
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++ + D + ++ M E+G+ PDL +Y A++ + R G ++S ++ +MK + +
Sbjct: 489 SSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCK 548
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
P+ Y SL+ +++ + EE+ S +
Sbjct: 549 PNELTYCSLLHAYANGKEIERMCALAEEIYSGI 581
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 6/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I L K G VSAA LL +L D +++ + ++ + + F+ ++++
Sbjct: 172 ISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGC 231
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ + N M + L+ + IA P+S N +I + E+
Sbjct: 232 KPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIA-PDSY-TYNTLISCCRRGNLYEE 289
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + +K PD +TYN +LD+ G+ R + + M+ G P ++YN+L++
Sbjct: 290 AAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLIS 349
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ L+ L +M E GIKPD+ TYT L+ F + G + ++++F +M+ + +P
Sbjct: 350 AYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKP 409
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+I + +LI GK M +FE++ +
Sbjct: 410 NICTFNALIKMHGNRGKFTEMMKVFEDIKT 439
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 10 CKAGNV-SAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C+ GN+ A +L+ ++ F P+ YN +L ++ + ++L+++ +
Sbjct: 281 CRRGNLYEEAAGVLKEMKLAG-FSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPP 339
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + A+ L ++V+ + ++ F K+ + + A+ IF
Sbjct: 340 SIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIF 399
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ ++ CKP++ T+N ++ + G G+ +M+ F +K PD +++NTLL+ +
Sbjct: 400 EEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQN 459
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F+EM +G P+ T+ LI S+ R G+ ++++ ++ M + + P + Y
Sbjct: 460 GMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSY 519
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+++ L + G + + EM
Sbjct: 520 NAVLAALARGGLWKQSEKVLAEM 542
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 102/221 (46%), Gaps = 8/221 (3%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
++YN VL A A S ++L ++ + Y + A+ + ++ EE
Sbjct: 517 SSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEE 576
Query: 94 VVQ-IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR-- 150
+ I P ++++ ++ +K + + F ++ PD+ T N ++ I GR
Sbjct: 577 IYSGIIEPRAVLL-KTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQ 635
Query: 151 -VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
V + N++L+ MK G P +YN+L+ + + RE+ GI+PD++
Sbjct: 636 MVAKANEILD---CMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDII 692
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+Y +I ++ R G + ++ R+ ++M++ P I Y + I
Sbjct: 693 SYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFI 733
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+E + SP+ I +N ++ + + + + KA I D +K P L TYN ++ +
Sbjct: 609 FLELRQRGFSPD-ITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYS 667
Query: 150 RVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
R R ++L E + G+ PD ISYNT++ + R+ EM ESG P
Sbjct: 668 RSANFERSEEILREILA---KGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAP 724
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
D++TY I S+ E++ + M + +P+ Y S++D K+ + D A
Sbjct: 725 DIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEA 780
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N +++ +++S E++ I I +PD+I+YN V+ R GR+ D
Sbjct: 655 SLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVL 714
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+E+G PD I+YNT + + + M + G KP+ TY +++D + +
Sbjct: 715 SEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKL 774
Query: 222 GNIEESLRLFNDMKQ 236
+E+ N++++
Sbjct: 775 NRRDEASMFVNNLRK 789
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV---LDILGRVGRVNDMLNEFASMK 165
I+ ++ + AL +F+ ++ K L+ +I+ + ILG+ GRV+ + ++
Sbjct: 133 IVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLC 192
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG-NI 224
+ G D +Y +++ R ++ F++M E G KP L+TY +++ +G+ G
Sbjct: 193 KDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPW 252
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + L + MK I P Y Y +LI ++ + A + +EM
Sbjct: 253 NKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEM 297
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SII V II K ++ A + ++ D+ Y ++ GR + + F
Sbjct: 166 SIIAV--IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVF 223
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
M+E G P I+YN +LN K+ + + M +GI PD TY LI S R
Sbjct: 224 KKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLI-SCCR 282
Query: 221 TGNI-EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
GN+ EE+ + +MK P Y +L+D K + AM + +EM +
Sbjct: 283 RGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGN 335
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 38/277 (13%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
KAG AAV++ + +R++ PN +N ++ ++ +D+ +
Sbjct: 388 KAGKDKAAVQIFEEMRNEGC-KPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDI 446
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
+ F +++ +E+ + N +I ++++ ++A+ ++
Sbjct: 447 VTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKR 506
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN---NLRK 185
+ PDL +YN VL L R G A MK+ P+ ++Y +LL+ N ++
Sbjct: 507 MLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE 566
Query: 186 IRRL--------------------DLCLI------------YFREMGESGIKPDLLTYTA 213
I R+ L L+ F E+ + G PD+ T A
Sbjct: 567 IERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNA 626
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++ +GR + ++ + + MK+ PS+ Y SL+
Sbjct: 627 MVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLM 663
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 73/164 (44%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A+A ++IE+ + + I +P + ++ + + + + F +++ G
Sbjct: 557 LLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRG 616
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD + N +++ + + + M G P L TY +L+ + R+ N E S
Sbjct: 617 FSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSE 676
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ + IRP I Y ++I + G++ A + EM S
Sbjct: 677 EILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRES 720
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+++LC+AG V A L + ++ AYN ++ + +I+ ++++L+++
Sbjct: 52 VDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 111
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y ++ F + + ++ N ++ A K ++ +A
Sbjct: 112 EPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWG 171
Query: 125 IFD--HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F + K PDLITYN ++D RV + ++ + F + G +PD ++YN++L
Sbjct: 172 LFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 231
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + +D F++M +SG P+ TY+ ++ R GN+ L L+ +M +++ P
Sbjct: 232 LARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPD 291
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ + ++ID L K KVD A + EEM+
Sbjct: 292 VLLCNAVIDMLCKAKKVDDAHKVLEEMS 319
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ C+ A++L + + K ++P+ YN +L+ A +++D + ++ K ++
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKG-YMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 249
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + Y+ + + L EE+ + +++ N +I K+++++
Sbjct: 250 DSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVD 309
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + + + + PD++TYNI+LD L + V+ F++M + G PD +SY+ +L
Sbjct: 310 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 369
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K ++ + F M E + PD++T+ L+D + G ++E+ L + M + +
Sbjct: 370 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVL 429
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P +L+ L + + D A+ +F+ M
Sbjct: 430 PDGVTCTTLMHGLCRDKRTDEAVRLFQYM 458
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 36/269 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LCK G V+ A+ +++ + +K + N ++ I+ D L +
Sbjct: 17 ISGLCKTGKVTEALEMVEEMTEKGV----------------NPDVATYTIIVDRLCRAGK 60
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ D+ +L ++++ + + N +I K IE+A +
Sbjct: 61 V---------------DEADELF---HKMIERGCSANTVAYNALINGLCKDENIERAYKL 102
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + +PD ITYN +L L R+G+V++ F SM G PD ++YN LL+ L K
Sbjct: 103 LEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYK 162
Query: 186 IRRLDLCLIYFR--EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ F+ +M + + PDL+TY LID F R +E+++LF D+ + P
Sbjct: 163 EGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDT 222
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y S++ L + +D A +F++M S
Sbjct: 223 VTYNSILLGLARKSNMDEAEEMFKKMVDS 251
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 136/307 (44%), Gaps = 40/307 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+ G VS A + S+ + + P+ AYN +L A + + ++ + K +
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRG-YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ R ++ D Y F + + + ++V+ + N I+ A+
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVL--------------------------------- 145
+++A +F + C P+ TY+IVL
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297
Query: 146 --DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
D+L + +V+D M + G VPD ++YN LL+ L K +D F M ++G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
PD+++Y+ +++ +T + ++ LF+ M ++++ P + + L+D L K GK+D A
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417
Query: 264 TIFEEMN 270
+ + M+
Sbjct: 418 DLLDVMS 424
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ + II K+ ++ +AL + + + PD+ TY I++D L R G+V++ F
Sbjct: 10 VVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFH 69
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G + ++YN L+N L K ++ EM G +PD +TY ++ R G
Sbjct: 70 KMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMG 129
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ E+ + F+ M + P + Y L+D L K GKV A +F+ M+
Sbjct: 130 KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ T T+ L +EE+ + + I+ ++ ++++A +F +
Sbjct: 13 YSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMI 72
Query: 131 GLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
C + + YN +++ L + + R +L E AS G PD I+YNT+L+ L ++
Sbjct: 73 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS---KGYEPDNITYNTILSGLCRMG 129
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN--DMKQQQIRPSIYV 245
++ +F M G PD++ Y L+D+ + G + E+ LF DM +++ P +
Sbjct: 130 KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLIT 189
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LID ++ K D AM +F+++
Sbjct: 190 YNTLIDGFCRVEKTDEAMKLFKDV 213
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 124/262 (47%), Gaps = 5/262 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN I+ LCKA V A ++L+ + K +P+ YN +L +TN +D + ++
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMS-KIGAVPDVVTYNILLDGLCKTNLVDKAHELFST 352
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + Y+ T+ + + +++ ++ N ++ K+ +
Sbjct: 353 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 412
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A + D + PD +T ++ L R R ++ + F M E G V D + +N
Sbjct: 413 LDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNI 472
Query: 179 LLNNLRKIRRLDLCLIYFREMGESG--IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+L L + +L L++F+ M +S PD++TYT L+++ G +++++ F M
Sbjct: 473 VLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTG 532
Query: 237 QQIRPSIYVYRSLIDNLKKMGK 258
P Y +L++ L+K G+
Sbjct: 533 SGCAPDYVAYNTLMNGLRKQGR 554
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+PD++TY+ ++ L + G+V + L M E GV PD +Y +++ L + ++D
Sbjct: 7 EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADE 66
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F +M E G + + Y ALI+ + NIE + +L +M + P Y +++ L
Sbjct: 67 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLC 126
Query: 255 KMGKVDLAMTIFEEMNS 271
+MGKV A F+ M S
Sbjct: 127 RMGKVSEAKQFFDSMPS 143
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E G PD ++Y+T+++ L K ++ L EM E G+ PD+ TYT ++D R G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++E+ LF+ M ++ + Y +LI+ L K ++ A + EEM S
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS 108
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 99/169 (58%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
++ N +I + ++ ++E A F +K KPD ITYN +++ L + R+ + +
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M++ GV P ++NTL++ + +L+ C I EM E+G+KP++++Y +++++F + G
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I E++ + +DM + + P+ VY ++ID + G D A + E+M S+
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 540
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 5/272 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
C+ + LCK G VS A +LQSL + + YN ++ +T +++ +F +
Sbjct: 339 CSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM- 397
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
SR + D Y + T + E+ ++ N +I A+ ++ Q
Sbjct: 398 -KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 456
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+EK ++ ++ KP++++Y +++ + G++ + + M V+P+ YN
Sbjct: 457 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 516
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + D I +M +GI P ++TY LI I E+ + N + +
Sbjct: 517 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 576
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ P Y +LI G +D A+ + + M+
Sbjct: 577 LIPDAVSYNTLISACCYRGNIDKALDLQQRMH 608
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 121/268 (45%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCKA ++ A LL ++D + +N ++ A T ++ F +L ++
Sbjct: 410 NALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 469
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y + AF + + ++++ + V N II A+ + ++
Sbjct: 470 NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQ 529
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ + +K P ++TYN+++ L ++++ S+ ++PD +SYNTL++
Sbjct: 530 AFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLIS 589
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+D L + M + GIK + TY LI G G + E L+ M Q + P
Sbjct: 590 ACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVP 649
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S ++ +++ K G A + +EM
Sbjct: 650 SNAIHNIMVEAYSKYGNEIKAEDLRKEM 677
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 129/339 (38%), Gaps = 72/339 (21%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ AG++ AV +L+ + PNA YN V+ + ++ ++
Sbjct: 164 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 223
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y I D +++V + I N ++ ++ ++
Sbjct: 224 ERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 283
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA------------------ 162
+ + D + K PD TY+I+ D L R G ML+ F
Sbjct: 284 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILL 343
Query: 163 -----------------SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
S+ AG+VP + YNTL+N + L+ F +M IK
Sbjct: 344 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 403
Query: 206 PDLLTYTA-----------------------------------LIDSFGRTGNIEESLRL 230
PD +TY A LID++GRTG +E+ +
Sbjct: 404 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 463
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++M++ ++P++ Y S+++ K GK+ A+ I ++M
Sbjct: 464 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 502
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P L + N++L+ L +GR D+ F + AG PD ++N + L +
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182
Query: 196 FREMGESGI-KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
R MG G P+ +Y +I R G +++ +F++M ++ + P+ Y ++ID
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242
Query: 255 KMGKVDLAMTIFEEM 269
K G ++ ++ ++M
Sbjct: 243 KGGDLEAGFSLRDQM 257
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 103/238 (43%), Gaps = 3/238 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ + G + +L +++ N PN +Y ++ A + I + IL D+
Sbjct: 445 NTLIDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 503
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y A++ Q I +E++ SI+ N +I QI
Sbjct: 504 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 563
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I + + + PD ++YN ++ G ++ L+ M + G+ +Y+ L+
Sbjct: 564 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 623
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+ L RL +++M ++ + P + +++++ + GN ++ L +M Q++
Sbjct: 624 SGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 138/265 (52%), Gaps = 7/265 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK ++ A+ L + + K I PN Y+ ++ + ++L D++
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDMI--E 319
Query: 64 RTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R ++ D +T A AF+ + +E+V+ + SI+ + +I F ++++
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F+ + C PD+++Y+ ++ + RV++ + F M + G+V + ++Y TL+
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + D+ F+EM G+ P+++TY L+D + G +E+++ +F +++ ++ P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIF 266
+IY Y +I+ + K GKV+ +F
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL---- 59
+ LCK G+ A LL + ++ P Y ++ + +D + + K++
Sbjct: 228 VNGLCKRGDTDLAFILLNKM-EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+V+ +L S C N+ R D ++LL ++++ + + +I AF K
Sbjct: 287 IRPNVVTYSSLIS-CLCNYGR----WSDASRLL---SDMIERKINPDVFTFSALIDAFVK 338
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A ++D + P ++TY+ +++ R+++ F M PD +S
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVS 398
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y+TL+ K +R+D + FREM + G+ + +TYT LI + G+ + + +F +M
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P+I Y +L+D L K GK++ AM +FE + S
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 99/185 (53%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ + ++++ + + N +I + +A+ + D + C+PDL+TY +V
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVV 227
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
++ L + G + M++ + P + Y T+++ L K + +D L F+EM GI
Sbjct: 228 VNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGI 287
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+P+++TY++LI G ++ RL +DM +++I P ++ + +LID K GK+ A
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 265 IFEEM 269
+++EM
Sbjct: 348 LYDEM 352
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C+ + A+ +L + K + PN + +L + I + ++ + V+
Sbjct: 123 INCFCRRSQLPLALAVLGKMM-KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ + + + ++ + I+ +V ++ ++ K + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + ++ K +P ++ Y ++D L + ++D LN F M+ G+ P+ ++Y++L++ L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R +M E I PD+ T++ALID+F + G + E+ +L+++M ++ I PSI
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y SLI+ ++D A +FE M S
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 129/267 (48%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G S A RLL + ++ I P+ ++ ++ A + + + ++ +++ S
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S Y++ F M D + E +V ++ + +I F K++++++ +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGM 416
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGVVPDFISYNTLLNN 182
+F + + +TY ++ L + G DM E F M GV P+ ++YNTLL+
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDC-DMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K +L+ ++ F + S ++P + TY +I+ + G +E+ LF ++ + ++P
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y ++I + G + A +F+EM
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 92/180 (51%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ + P + + +I F + Q+ AL + + L +P+++T + +L+
Sbjct: 105 EQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R+++ + M G P+ +++NTL++ L + + M G +PDL+TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTY 224
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ + G+ + + L N M+Q ++ P + +Y ++ID L K +D A+ +F+EM +
Sbjct: 225 GVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMET 284
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 57/117 (48%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+++D + F M ++ P I ++ LL+ + K+ + D+ + +M G+ + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ F R + +L + M + P+I SL++ ++ A+ + ++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI----KGLKCKPD 137
D+ T +L++ + + +++ N ++ F + E+AL + H+ +GL C PD
Sbjct: 247 DEATNILLW--RMPEFGCTPNVVSYNTLVKGFCNENRAEEALELL-HVMADDQGLSCPPD 303
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+++YN V++ R G+V+ N F M + G+ PD ++YNT+++ L K + +D F+
Sbjct: 304 VVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQ 363
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+M + G+KP TY LI + TG +E +RL +M + P ++Y L+D L K G
Sbjct: 364 QMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNG 423
Query: 258 KVDLAMTIFEEM 269
+ A IF+ +
Sbjct: 424 RCTEARNIFDSV 435
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
++ +LL + + ++ P ++ N +I F + Q++KA +F + PD++T
Sbjct: 282 AEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVT 341
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN V+D L + V+ F M + GV P +YN L++ + + EM
Sbjct: 342 YNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMS 401
Query: 201 ESGIKPDLLTYTALIDSFGRTGN---------------------IEESLRLFNDMKQQQI 239
++PD Y L+D + G I+E++ +F+ M+QQ +
Sbjct: 402 THDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGL 461
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +LID L K+G+VD A+ F +M
Sbjct: 462 SPNVVNYGALIDALCKLGRVDDAILKFNQM 491
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V N ++ + ++ +A + + + + +PD+I+YN ++D GR ++
Sbjct: 523 VVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G+ P+ +YNTLL+ K RR+D REM +G PD++TY ++ +TG
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
E+ L+ +M + + +Y Y +++ L K VD A +F+ + S
Sbjct: 643 RFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCS 691
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLN 159
IV N+++ ++++++A ++ + C P++++YN ++ R + +L+
Sbjct: 231 IVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLH 290
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
A + PD +SYNT++N + ++D F +M + GI PD++TY +ID
Sbjct: 291 VMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLC 350
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ ++ + +F M + ++PS Y LI GK + + EEM++
Sbjct: 351 KAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMST 402
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 98 ASPESIIVVNRIIFAFAKSR------QIEKALLIFDHIK---GLKCKPDLITYNIVLDIL 148
A P S+ N ++ A +++ + + + +FD + K PD TY+I++
Sbjct: 146 ARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCF 205
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL-IYFREMGESGIKPD 207
R+GR+ F + + G + I +N LL L +RLD I M E G P+
Sbjct: 206 CRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPN 265
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQ---IRPSIYVYRSLIDNLKKMGKVDLAMT 264
+++Y L+ F EE+L L + M Q P + Y ++I+ + G+VD A
Sbjct: 266 VVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYN 325
Query: 265 IFEEM 269
+F +M
Sbjct: 326 LFLQM 330
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
TD+ +LL + +V I + N ++ + K+R+I+ A + + PD++T
Sbjct: 574 TDEAAKLL---DVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVT 630
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN +L L + GR ++ + +M + D +YN +LN L K +D F+ +
Sbjct: 631 YNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLC 690
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
G++ ++T+ +I + + G E+++ LF + + P + Y + +NL K G ++
Sbjct: 691 SKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 750
Query: 261 LAMTIFEEM 269
+F M
Sbjct: 751 ELGVLFSAM 759
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 88/182 (48%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
IE ++++ +I N ++ + + ++A + D + + KP+ TYN +L
Sbjct: 545 LIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYC 604
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ R++D + M G PD ++YNT+L+ L + R + M S + D+
Sbjct: 605 KARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMY 664
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +++ + ++E+ ++F + + ++ I + +I L K GK + AM +F +
Sbjct: 665 TYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATI 724
Query: 270 NS 271
++
Sbjct: 725 SA 726
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 124/271 (45%), Gaps = 8/271 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC+ G V A RL++ + + P+ +YN ++ T D + ++L D++VS
Sbjct: 533 LCREGRVMEAQRLIELMLRVGV-RPDVISYNTLVDGHCLTGRTDEAAKLL-DVMVSIGLK 590
Query: 67 SSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
++ Y + + E++ ++ N I+ ++ + +A +
Sbjct: 591 PNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKEL 650
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ ++ + + D+ TYNI+L+ L + V++ F S+ G+ I++N ++ L K
Sbjct: 651 YLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLK 710
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ + + F + G+ PD+ TY + ++ + G++EE LF+ M++ P+ +
Sbjct: 711 GGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRM 770
Query: 246 YRSLIDNLKKMGKVDLA---MTIFEEMNSSL 273
+L+ G + A ++ +E N SL
Sbjct: 771 LNALVRRFLHRGDISRAGAYLSKLDEKNFSL 801
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 135/272 (49%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LC+AG + +L + + + +P+ Y+ + + T D + ++ +
Sbjct: 262 NVLLSGLCRAGRMGETAAVLDEMASRKM-VPDGFTYSILFDGHSRTGDSQTMLSLFEESV 320
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + ++ ++ +V ++ ++ N +I + + +E
Sbjct: 321 KKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLE 380
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IF +K +PD ITYN +++ LG+V R+ + + M++ GV P ++NTL+
Sbjct: 381 GAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLI 440
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + +L+ C I +M E G+KP++++Y +++++F + G I E++ + +DM + +
Sbjct: 441 DAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVL 500
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P VY ++ID + G D A + E+M SS
Sbjct: 501 PGAQVYNAIIDAYIECGSTDQAFMLAEKMKSS 532
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 13/275 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I L K ++ A L+ + +KN P+ +N ++ A ++ F IL D+
Sbjct: 402 NALINGLGKVERITEAHDLVIEM-EKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQ 460
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-----IFIEEVVQIASPESIIVVNRIIFAFAK 115
+ Y + AF + + +FI++V+ A V N II A+ +
Sbjct: 461 EKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQ-----VYNAIIDAYIE 515
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++A ++ + +K P ++TYN+++ L + ++++ S++ G+ PD IS
Sbjct: 516 CGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVIS 575
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNTL++ D L +EM + GIKP TY L S G G + E L+ M
Sbjct: 576 YNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQML 635
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ + P +Y ++D K G+ + +EM+
Sbjct: 636 DKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMS 670
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 123/305 (40%), Gaps = 37/305 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ AG++ AV +L+ + PNA YN V+ + + ++ ++
Sbjct: 156 NKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMP 215
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y I D ++++ ++I N ++ ++ ++
Sbjct: 216 EKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMG 275
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF------------------- 161
+ + D + K PD TY+I+ D R G ML+ F
Sbjct: 276 ETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILL 335
Query: 162 ----------------ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
++ +G++ + YNTL+N +I L+ F++M I+
Sbjct: 336 NGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIR 395
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD +TY ALI+ G+ I E+ L +M++ + PS+ + +LID + G+++ I
Sbjct: 396 PDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFII 455
Query: 266 FEEMN 270
+M
Sbjct: 456 LSDMQ 460
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
C+ + LCK G +S A +LQ+L + + YN ++ + D++ +F I + +
Sbjct: 331 CSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM- 389
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
SR + D I N +I K +I
Sbjct: 390 -KSRLIRPD---------------------------------HITYNALINGLGKVERIT 415
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + ++ P + T+N ++D GR G++ + M+E G+ P+ +SY +++
Sbjct: 416 EAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIV 475
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K ++ + +M + P Y A+ID++ G+ +++ L MK +
Sbjct: 476 NAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVP 535
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
PSI Y LI L K ++ A + + +
Sbjct: 536 PSIVTYNLLIKGLCKQSQISEAEELLDSL 564
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 83 DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
DC + +F +E+ + A + I N +I K +E ++ + KP++ITYN
Sbjct: 204 DCDAVKLF-DEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYN 262
Query: 143 IVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
++L L R GR+ + +L+E AS K +VPD +Y+ L + + L F E
Sbjct: 263 VLLSGLCRAGRMGETAAVLDEMASRK---MVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ G+K T + L++ + G I ++ + + + + +Y +LI+ ++G +
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379
Query: 260 DLAMTIFEEMNSSL 273
+ A +IF++M S L
Sbjct: 380 EGAFSIFQQMKSRL 393
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 12/265 (4%)
Query: 17 AAVRLLQSLRDKNI-----FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
A+RLL L D N L++ D+ +F+ LLV++R
Sbjct: 99 GALRLLSLLADARAPLPSLSSCNLLLESLLSLGRHADVRGAFE----LLVAARARPDTFT 154
Query: 72 TNFA-RAFIMTDDCTQLLIFIEEVVQIASP-ESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
N A +A ++ D + + + + +P + N +I K+ A+ +FD +
Sbjct: 155 WNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEM 214
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
P+ ITYN ++D + G + ++ M G+ P+ I+YN LL+ L + R+
Sbjct: 215 PEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRM 274
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
EM + PD TY+ L D RTG+ + L LF + ++ ++ Y L
Sbjct: 275 GETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSIL 334
Query: 250 IDNLKKMGKVDLAMTIFEEM-NSSL 273
++ L K GK+ A + + + NS L
Sbjct: 335 LNGLCKDGKISKAEEVLQTLVNSGL 359
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 102/252 (40%), Gaps = 35/252 (13%)
Query: 52 SFQILKDLLVSSRTLSS---DCYTNFARAFIMTDDCTQLLIFI--------EEVVQIASP 100
S + K LL+SS+ ++ D Y A A + Q F+ ++ P
Sbjct: 38 SVDVAKSLLISSQPPAASVPDLYHALASAAAASPGDPQAPSFLCDAASALVVASARLRLP 97
Query: 101 ESIIVVNRIIFAFAKSRQIEKALL--------------------IFDHIKGLKCKPDLIT 140
+ + R++ A +R +L F+ + + +PD T
Sbjct: 98 DGAL---RLLSLLADARAPLPSLSSCNLLLESLLSLGRHADVRGAFELLVAARARPDTFT 154
Query: 141 YNIVLDILGRVGRVNDMLNEFASMK-EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+N + G +++ + M + P+ SYN ++ L K + F EM
Sbjct: 155 WNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEM 214
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
E + P+ +TY +ID + G++E RL++ M + ++P++ Y L+ L + G++
Sbjct: 215 PEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRM 274
Query: 260 DLAMTIFEEMNS 271
+ +EM S
Sbjct: 275 GETAAVLDEMAS 286
>gi|225446845|ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Vitis vinifera]
Length = 844
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 7/257 (2%)
Query: 22 LQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSS--RTLSSDCYTNFARAFI 79
L++ DK F+PN + V+ A D D S + + L+ +CY
Sbjct: 163 LETQLDKLHFVPNMSH-VIQALKIVTDTDASLSLFRWAKRQPWYSMLNDECYALLFDRLN 221
Query: 80 MTDDCTQLLIFIEEVVQIASP----ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
+ D + +E+++ + S+I N+++ AK+ ++E A F ++ CK
Sbjct: 222 QSRDFDAIQSLFDEMIRDSGDNNGVSSVIACNQVVRDLAKAEKLEVAFCCFKKVQDSGCK 281
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
D TYN ++ + G + SM+ AG + D +Y ++ +L K RLD
Sbjct: 282 IDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKL 341
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F+EM E ++P L + +L+DS G+ G ++ S++++ +M+ +RPS +Y SLI++ K
Sbjct: 342 FQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVK 401
Query: 256 MGKVDLAMTIFEEMNSS 272
GK++ A+ I++EM +
Sbjct: 402 AGKLETALRIWDEMKKA 418
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 94/166 (56%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F KA +++ ++ C D TY +++ L + GR++ F MKE
Sbjct: 288 NSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKE 347
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P F+ + +L++++ K RLD + + EM G++P Y +LI+SF + G +E
Sbjct: 348 KNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLET 407
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+LR++++MK+ RP+ +Y ++++ K GK++ AM++F +M +
Sbjct: 408 ALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKA 453
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 91/164 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + AKS +++ A +F +K +P + + ++D +G+ GR++ + + M+ G
Sbjct: 325 MIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFG 384
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P Y +L+ + K +L+ L + EM ++G +P+ YT +++S ++G +E ++
Sbjct: 385 LRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAM 444
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+F+DM++ P+ Y L++ G+VD AM ++ M ++
Sbjct: 445 SVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNA 488
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 121/271 (44%), Gaps = 1/271 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
CN + L KA + A + ++D + A YN ++ +F++ + +
Sbjct: 252 CNQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESME 311
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L Y + + +E+ + S +V ++ + K+ +++
Sbjct: 312 AAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLD 371
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++ ++ ++G +P Y +++ + G++ L + MK+AG P++ Y ++
Sbjct: 372 TSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVV 431
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +L+ + F +M ++G P TY+ L++ +G ++ +++L+N M +R
Sbjct: 432 ESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLR 491
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y +L+ L VD+A + EM +
Sbjct: 492 PGLSTYTALLTLLANKKLVDVAAKVLLEMKA 522
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 121/265 (45%), Gaps = 6/265 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI---FLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
I L K+G + AA +L Q +++KN+ FL + ++ + + +D S ++ ++
Sbjct: 326 IPSLAKSGRLDAAFKLFQEMKEKNLRPSFL--VFASLVDSMGKAGRLDTSMKVYMEMQGF 383
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S+ Y + +F+ L +E+ + + + ++ + AKS ++E A
Sbjct: 384 GLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETA 443
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +F ++ P TY+ +L++ G+V+ + + SM AG+ P +Y LL
Sbjct: 444 MSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALLTL 503
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + +D+ EM G D+ L+ + + G+++ +LR M IR +
Sbjct: 504 LANKKLVDVAAKVLLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMGSSGIRTN 562
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFE 267
++ R L ++ K G + A + E
Sbjct: 563 NFIIRQLFESCMKNGLYESAKPLLE 587
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 39/304 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC-----VLVASAETNDIDLSFQILK 57
N I+ L K+G V A+ L ++ KN PN + VLVA + +D ++
Sbjct: 348 NTMIQALSKSGMVDKAILLFCNM-IKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSN 406
Query: 58 DLLVSS------RTLSS-----------------------DCYTNFARAFIMTDDCTQLL 88
+ S RTLS D Y + + + +
Sbjct: 407 KFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAI 466
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ +V + ++ N ++ K +Q+ +++ +K PD+ TYNI++ L
Sbjct: 467 ELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSL 526
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
GRVG+V + + F ++ + PD ISYN+L+N L K +D + F EM + G+ PD+
Sbjct: 527 GRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDV 586
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK----VDLAMT 264
+TY+ LI+ FG+T +E + LF+ M Q P+I Y L+D L++ G+ VDL
Sbjct: 587 VTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAK 646
Query: 265 IFEE 268
+ E+
Sbjct: 647 LREQ 650
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 114/250 (45%), Gaps = 37/250 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+E LC+ G A+ LL + +K I YN VL + +
Sbjct: 453 LESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQV--------------- 497
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ L E++ Q I N +I + + ++++A+
Sbjct: 498 --------------------SHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVE 537
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ ++ CKPD+I+YN +++ LG+ G V++ F M++ G+ PD ++Y+TL+
Sbjct: 538 VFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFG 597
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++++ F M G P+++TY L+D R G E++ L+ +++Q + P
Sbjct: 598 KTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSI 657
Query: 245 VYRSLIDNLK 254
Y +++D L+
Sbjct: 658 TY-AILDRLQ 666
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 38/273 (13%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN +L A A+ +D S+++ KD+ + YT R + L EE+
Sbjct: 276 AYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEM 335
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRV 151
+ ++I N +I A +KS ++KA+L+F ++ C+P+ TY+I+L++L G++
Sbjct: 336 LTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQL 395
Query: 152 GRVNDML---NEF-----------------------------ASMKEAGVVPDFISYNTL 179
GR++++L N+F S + G D +Y ++
Sbjct: 396 GRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGG---DRDAYISM 452
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L +L + + + ++ E GI D + Y ++ + G+ + L+ MKQ
Sbjct: 453 LESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGP 512
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I+ Y LI +L ++GKV A+ +FEE+ SS
Sbjct: 513 FPDIFTYNILISSLGRVGKVKEAVEVFEELESS 545
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 9/172 (5%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N ++ A AK Q++++ +F +K C PD TY I++ + G++GR + L F
Sbjct: 274 IFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFE 333
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF---G 219
M G P+ I+YNT++ L K +D ++ F M ++ +P+ TY+ +++ G
Sbjct: 334 EMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEG 393
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ G ++E L + N I SIY Y L+ L K+G A +F M S
Sbjct: 394 QLGRLDEVLEVSNKF----INKSIYAY--LVRTLSKLGHSSEAHRLFCNMWS 439
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A +SR ++A ++ + + D+ YN++LD L + +++ F MK P
Sbjct: 248 AHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNP 307
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D +Y ++ K+ R + L F EM G P+L+ Y +I + ++G +++++ LF
Sbjct: 308 DEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLF 367
Query: 232 NDMKQQQIRPSIYVYRSLIDNL---KKMGKVDLAMTI 265
+M + RP+ + Y +++ L ++G++D + +
Sbjct: 368 CNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEV 404
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ +CK G++ A +L + + PN YN VL + ++L ++
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + F +++ +E+++ +I +I F K I++A+
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + CKP+ ++Y IVL L GR D + M + G P+ +++NTL+N L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + ++M +G PDL++Y+ +ID G+ G EE+L L N M + I P+
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y S+ L + G+V+ + +F+ + +
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDT 560
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 9/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+E C++G +VR+L+++ K L + NC LV +A E +D + +L+ L
Sbjct: 153 LEAACRSGGFRNSVRVLEAMHAKGCTL-DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + M + ++E+V++ +I+ N +I ++ E+
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRV---NDMLNEFASMKEAGVVPDFISYNTLL 180
+ + C PD+ Y ++D + + G + N++LN M G+ P+ + YNT+L
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR---MPSYGLKPNVVCYNTVL 328
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L R EM + D +T+ L+D F + G ++ + L M
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y ++I+ K G +D A+ + + M+S
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + +P+ Y V+ + ID + +LK +
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGC-MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + +++Q P + + N +I K +E+A+
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ + L M G+ P+ I Y+++ L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F + ++ I+ D + Y A+I S + + ++ F M P+
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G A + E+ S
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCS 629
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ A +S ++ + + + C D N+VL+ + G V++ + + G
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D +SYN +L L +R EM P+++T+ LI R G E
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M + P I +Y ++ID + K G +++A I M S
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ +I AL + D + C P Y+++L+ R G + + +M G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF---GRTGNIE 225
D + N +LN + + +D + R++ G + D+++Y A++ R G++E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
E L ++M + P+I + +LI L + G + + +M+
Sbjct: 237 E---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCK G + A ++ +++ +K L +YN +++ +D + ++ LL
Sbjct: 189 NVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLE 248
Query: 62 SSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ D T + + + + +++ S ++ + +I + KS I
Sbjct: 249 DGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGII 308
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KA+ ++ + L P TY++++D ++ +N F+ MK +G+ P YNTL
Sbjct: 309 DKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTL 368
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ +L K L+ F+EM ES +PD +++ +ID + G+I + L NDM+Q +
Sbjct: 369 MASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGL 428
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y Y S I+ L K+G+++ A F+ M +S
Sbjct: 429 TPDAYTYSSFINRLSKLGQMEEAKGAFDSMIAS 461
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 91/167 (54%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ N II K +++EKA+ + ++G C+P+ TY I++D L + GRV + +
Sbjct: 10 IVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLG 69
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
MK G+ D + Y+TL++ LD F EM E GI P+++ Y+ LI+ F + G
Sbjct: 70 EMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKG 129
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+ + + M ++ I+P +Y Y +I L K G+ A+ +F+ M
Sbjct: 130 LWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 11/254 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDL- 59
N I+ LCK G + AV + ++ ++ F N + C ++ ++ ID + ++ K +
Sbjct: 261 NTVIQGLCKEGRLDKAVEIYDTMIERGSF-GNLFTCHILIGEYIKSGIIDKAMELWKRVH 319
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
LV S T S F + ++ +F + SP ++ N ++ + K
Sbjct: 320 KLGLVPSSTTYSVMIDGFCKMHMLN---FAKGLFSRMKISGLSP-TLFDYNTLMASLCKE 375
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+E+A +F +K C+PD I++NI++D + G ++ M++ G+ PD +Y
Sbjct: 376 SSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTY 435
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++ +N L K+ +++ F M SGI PD Y +LI FG IEE + L M
Sbjct: 436 SSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMAD 495
Query: 237 QQIRPSIYVYRSLI 250
+ + + S++
Sbjct: 496 MGVILDLEITNSIL 509
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 130/272 (47%), Gaps = 11/272 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL---V 61
++ LCK G V A+RLL ++ K + + Y+ ++ +D + ++L +
Sbjct: 52 MDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGI 111
Query: 62 SSRTLSSDCYTN-FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + C N F + + + L E +Q P+ + +I K +
Sbjct: 112 SPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQ---PD-VYTYTCMIGGLCKDGRAR 167
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL +FD + +P +TYN++++ L + G + D F +M E G + +SYNTL+
Sbjct: 168 KALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLI 227
Query: 181 NNLRKIRRLDLCLIYFREMGESG--IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L +LD + F + E G ++PD++T+ +I + G +++++ +++ M ++
Sbjct: 228 MGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG 287
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+++ LI K G +D AM +++ ++
Sbjct: 288 SFGNLFTCHILIGEYIKSGIIDKAMELWKRVH 319
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK ++PD +SYNT++N L K +RL+ + EM S +P+ TY L+D + G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+EE++RL +MK++ + + VY +LI G +D +F+EM
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM 106
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 7/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL-RDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
N I LC G + A++L SL D N P+ +N V+ + +D + +I D
Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIY-DT 282
Query: 60 LVSSRTLSS--DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ + + C+ +I + + + + V ++ S + +I F K
Sbjct: 283 MIERGSFGNLFTCHILIGE-YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMH 341
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ A +F +K P L YN ++ L + + F MKE+ PD IS+N
Sbjct: 342 MLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFN 401
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ K + +M + G+ PD TY++ I+ + G +EE+ F+ M
Sbjct: 402 IMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIAS 461
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P +VY SLI +++ + + +M
Sbjct: 462 GITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ +CK G++ A +L + + PN YN VL + ++L ++
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + F +++ +E+++ +I +I F K I++A+
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + CKP+ ++Y IVL L GR D + M + G P+ +++NTL+N L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + ++M +G PDL++Y+ +ID G+ G EE+L L N M + I P+
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y S+ L + G+V+ + +F+ + +
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDT 560
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 9/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+E C++G +VR+L+++ K L + NC LV +A E +D + +L+ L
Sbjct: 153 LEAACRSGGFRNSVRVLEAMHAKGCTL-DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + M + ++E+V++ +I+ N +I ++ E+
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRV---NDMLNEFASMKEAGVVPDFISYNTLL 180
+ + C PD+ Y ++D + + G + N++LN M G+ P+ + YNT+L
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR---MPSYGLKPNVVCYNTVL 328
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L R EM + D +T+ L+D F + G ++ + L M
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y ++I+ K G +D A+ + + M+S
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + +P+ Y V+ + ID + +LK +
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGC-MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + +++Q P + + N +I K +E+A+
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ + L M G+ P+ I Y+++ L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F + ++ I+ D + Y A+I S + + ++ F M P+
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G A + E+ S
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCS 629
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ A +S ++ + + + C D N+VL+ + G V++ + + G
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D +SYN +L L +R EM P+++T+ LI R G E
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M + P I +Y ++ID + K G +++A I M S
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ +I AL + D + C P Y+++L+ R G + + +M G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF---GRTGNIE 225
D + N +LN + + +D + R++ G + D+++Y A++ R G++E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
E L ++M + P+I + +LI L + G + + +M+
Sbjct: 237 E---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ +CK G++ A +L + + PN YN VL + ++L ++
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + F +++ +E+++ +I +I F K I++A+
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + CKP+ ++Y IVL L GR D + M + G P+ +++NTL+N L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + ++M +G PDL++Y+ +ID G+ G EE+L L N M + I P+
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y S+ L + G+V+ + +F+ + +
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDT 560
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 9/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+E C++G +VR+L+++ K L + NC LV +A E +D + +L+ L
Sbjct: 153 LEAACRSGGFRNSVRVLEAMHAKGCTL-DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + M + ++E+V++ +I+ N +I ++ E+
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRV---NDMLNEFASMKEAGVVPDFISYNTLL 180
+ + C PD+ Y ++D + + G + N++LN M G+ P+ + YNT+L
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR---MPSYGLKPNVVCYNTVL 328
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L R EM + D +T+ L+D F + G ++ + L M
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y ++I+ K G +D A+ + + M+S
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + +P+ Y V+ + ID + +LK +
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGC-MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + +++Q P + + N +I K +E+A+
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ + L M G+ P+ I Y+++ L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F + ++ I+ D + Y A+I S + + ++ F M P+
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G A + E+ S
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCS 629
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ A +S ++ + + + C D N+VL+ + G V++ + + G
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D +SYN +L L +R EM P+++T+ LI R G E
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M + P I +Y ++ID + K G +++A I M S
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ +I AL + D + C P Y+++L+ R G + + +M G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF---GRTGNIE 225
D + N +LN + + +D + R++ G + D+++Y A++ R G++E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
E L ++M + P+I + +LI L + G + + +M+
Sbjct: 237 E---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ +CK G++ A +L + + PN YN VL + ++L ++
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + F +++ +E+++ +I +I F K I++A+
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + CKP+ ++Y IVL L GR D + M + G P+ +++NTL+N L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + ++M +G PDL++Y+ +ID G+ G EE+L L N M + I P+
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y S+ L + G+V+ + +F+ + +
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDT 560
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 9/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+E C++G +VR+L+++ K L + NC LV +A E +D + +L+ L
Sbjct: 153 LEAACRSGGFRNSVRVLEAMHAKGCTL-DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + M + ++E+V++ +I+ N +I ++ E+
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRV---NDMLNEFASMKEAGVVPDFISYNTLL 180
+ + C PD+ Y ++D + + G + N++LN M G+ P+ + YNT+L
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR---MPSYGLKPNVVCYNTVL 328
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L R EM + D +T+ L+D F + G ++ + L M
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y ++I+ K G +D A+ + + M+S
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + +P+ Y V+ + ID + +LK +
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGC-MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + +++Q P + + N +I K +E+A+
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ + L M G+ P+ I Y+++ L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F + ++ I+ D + Y A+I S + + ++ F M P+
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G A + E+ S
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCS 629
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ A +S ++ + + + C D N+VL+ + G V++ + + G
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D +SYN +L L +R EM P+++T+ LI R G E
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M + P I +Y ++ID + K G +++A I M S
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ +I AL + D + C P Y+++L+ R G + + +M G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF---GRTGNIE 225
D + N +LN + + +D + R++ G + D+++Y A++ R G++E
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
E L ++M + P+I + +LI L + G + + +M+
Sbjct: 237 E---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 133/268 (49%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLV 61
N +I LCK+ V AV + +SL +K + C LV + ++ +++ +++
Sbjct: 264 NVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIE 323
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S + I + +V ++ ++ V N +I + K+ ++E+
Sbjct: 324 LGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEE 383
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A L+F + P+ +TY I++D GR +++ F M E G+ SYN+++N
Sbjct: 384 AELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMIN 443
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K ++ + + F+EM + G+KP + TYT+LI + + G + ++ +L+++M + I P
Sbjct: 444 CQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAP 503
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + +LI L ++ K+ A +F+EM
Sbjct: 504 NTVTFTALICGLCQINKMAEASKLFDEM 531
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 7/273 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRD----KNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
+G IE L K G++ A LL + N+F+ N+ L + + + +L F ++ +
Sbjct: 334 SGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAE 393
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ ++ YT F + ++++ ++ N +I K +
Sbjct: 394 RGLNPNDVT---YTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGK 450
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ A L+F + KP + TY ++ + G V + M G+ P+ +++
Sbjct: 451 MKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTA 510
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ L +I ++ F EM E I P+ +TY LI+ R GN + L ++M ++
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG 570
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P Y YR LI L G+V A +++
Sbjct: 571 LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHH 603
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 7/270 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLL 60
N IE C+ GN + A LL + K + P+ Y ++ T + + + + DL
Sbjct: 544 NVLIEGHCREGNTTRAFELLDEMIKKGLS-PDTYTYRPLIAGLCSTGRVSEAKEFINDLH 602
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII-FAFAKSRQI 119
+ L CYT + F + L+ +E+V ++ +I A ++ +I
Sbjct: 603 HKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI 662
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
LL H KG++ PD + Y I++D + G + + M G VP+ ++Y L
Sbjct: 663 LFELLREMHGKGMQ--PDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTAL 720
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L K ++ + F+ M P+ +TY +D + GN+E +L+L N M Q
Sbjct: 721 VNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF 780
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y LI ++GK A + + M
Sbjct: 781 ANTV-TYNILIRGYCQIGKFQEAAKLLDVM 809
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
Q+L + +V + ++ + + KA I + +G C ++TYN+ +
Sbjct: 208 QVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFI 267
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ L + RV + + S+ E G+ D ++Y TL+ L +I+ ++ + EM E G
Sbjct: 268 NGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYV 327
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P + LI+ + G+IE + L N + + + P+++VY S+I++L K GK++ A +
Sbjct: 328 PSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELL 387
Query: 266 FEEM 269
F M
Sbjct: 388 FSVM 391
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ N I KS+++ +A+ + + K DL+TY ++ L R+ +
Sbjct: 259 SIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMM 318
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E G VP + + L+ L K+ ++ ++G+ G+ P+L Y ++I+S +T
Sbjct: 319 DEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKT 378
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +EE+ LF+ M ++ + P+ Y LID + K+D+A F +M
Sbjct: 379 GKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
++ CK G + A+ Q + + + + VL++ A + + F++L+++
Sbjct: 617 LQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQ 676
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ YT FI + + + F ++ + + ++ K+ + +A L+
Sbjct: 677 PDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLL 736
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F + + P+ ITY LD L + G + + L +M + G + ++YN L+ +
Sbjct: 737 FKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQ 795
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
I + M G+ PD +TY+ I + + GN++ ++ ++ M Q+ ++P V
Sbjct: 796 IGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVV 855
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+ LI G++D A+ + +M
Sbjct: 856 FNFLIHACCLNGELDRALQLRNDM 879
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 90/218 (41%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+YN ++ + + ++ + K+++ + YT+ + + E+
Sbjct: 437 SYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM 496
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ + +I + ++ +A +FD + LK P+ +TYN++++ R G
Sbjct: 497 TGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNT 556
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
M + G+ PD +Y L+ L R+ + ++ + D L YTAL
Sbjct: 557 TRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTAL 616
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ F + G I+E+L +M + ++ + Y LI
Sbjct: 617 LQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG 654
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K+GN+ A + + ++PN+ Y ++ + ++ + + K +LV
Sbjct: 686 IDGFIKSGNLKKAFEFWYIMIGEG-YVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGE 744
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F + L ++Q S + + N +I + + + ++A
Sbjct: 745 AIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAA 803
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + G+ PD ITY+ + + G V+ ++ + M + G+ PD + +N L++
Sbjct: 804 KLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHAC 863
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
LD L +M G+KP TY +L+
Sbjct: 864 CLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 130/275 (47%), Gaps = 10/275 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQIL 56
+C I LC+ G S A R+L++ ++F AYN ++ +D + +++
Sbjct: 78 LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVF---AYNTLVAGYCRYGHLDAARRLI 134
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ V+ + YT R L ++++++ +++ ++ A ++
Sbjct: 135 GSMPVAPDAYT---YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRN 191
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
E+A+ + D ++ C P+++TYN++++ + R GRV+D + G PD +SY
Sbjct: 192 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSY 251
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TLL L +R D F EM E P+ +T+ LI F R G +E ++++ M +
Sbjct: 252 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTE 311
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + +I+++ K G+VD A + +M S
Sbjct: 312 HGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGS 346
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 132/306 (43%), Gaps = 35/306 (11%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN I +CK G V A +LL + P+ +Y VL D + ++L +
Sbjct: 320 LCNIVINSICKQGRVDDAFKLLNDMGSYGCN-PDTISYTTVLKGLCRAERWDDAKELLNE 378
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ ++ + + F Q ++ IE++ + ++ N ++ F
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438
Query: 119 IEKALLIFDHIK-------------GL-------------------KCKPDLITYNIVLD 146
I+ AL +F + GL C P+++T+N+++
Sbjct: 439 IDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVS 498
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G + + + M E G P+ I+YNTLL+ + K + L + G+ P
Sbjct: 499 FFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSP 558
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D++T++++I + IEE+++LF+ ++ +RP VY ++ L K ++D A+ F
Sbjct: 559 DVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFF 618
Query: 267 EEMNSS 272
M S+
Sbjct: 619 AYMVSN 624
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E +C+ A+ +L +R K PN YN ++ +D + ++L L
Sbjct: 185 LEAMCRNSGFEQAMAVLDEMRAKGC-TPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243
Query: 64 RTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT + + DD +L F E + + P + + +I F + +E
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEEL--FAEMMEKNCMPNEV-TFDMLIRFFCRGGMVE 300
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + + C + NIV++ + + GRV+D M G PD ISY T+L
Sbjct: 301 RAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVL 360
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + R D EM + P+ +T+ I + G IE+++ L M +
Sbjct: 361 KGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCT 420
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +L++ G +D A+ +F M
Sbjct: 421 VGVVTYNALVNGFCVQGHIDSALELFRSM 449
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 114/256 (44%), Gaps = 4/256 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N +I LC+ G + A+ L++ + + + YN ++ ID + ++ + +
Sbjct: 392 NTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPC 451
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T++ YT + + E+++ P +++ N ++ F + +E+
Sbjct: 452 KPNTIT---YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEE 508
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + + C P+LITYN +LD + + D L + GV PD I++++++
Sbjct: 509 AIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 568
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K R++ + F + + G++P + Y ++ + I+ ++ F M P
Sbjct: 569 ILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMP 628
Query: 242 SIYVYRSLIDNLKKMG 257
+ Y LI+ L G
Sbjct: 629 NESTYIILIEGLAHEG 644
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ ++ L R GR +D + + +G D +YNTL+ + LD
Sbjct: 74 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD---AA 130
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
R +G + PD TYT LI G + ++L L +DM ++ +P++ Y L++ + +
Sbjct: 131 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190
Query: 256 MGKVDLAMTIFEEMNS 271
+ AM + +EM +
Sbjct: 191 NSGFEQAMAVLDEMRA 206
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
EV Q+ +I N +I A ++ ++ A+ +F+ + +C+PDL TYN ++ + GR G
Sbjct: 125 EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCG 184
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ D F + E G PD ++YN+LL K D E+ +G K D +TY
Sbjct: 185 KAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYN 244
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I +G+ G ++ +L L+++M+ P Y LID+L KM ++ A + EEM
Sbjct: 245 TMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEM 301
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 113/235 (48%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ + ++ ++L+ + Y + AF D + EE+V
Sbjct: 173 YNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELV 232
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + I N +I + K +++ AL ++D ++ L C PD +TY +++D LG++ R++
Sbjct: 233 RAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRIS 292
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D M +AG+ P ++++ L+ K R + + F M SG+KPD L Y ++
Sbjct: 293 DAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVML 352
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
D R+G++ + + L+ M RP +Y+ ++ L K + D + ++M
Sbjct: 353 DIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDME 407
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS-DCYTNFARAFIMTDDCTQLLIFIEEV 94
+N ++ A AE+ + + + D+++ L + D RA I+ +L + ++E+
Sbjct: 627 WNALIHAYAESGLYEHARAVF-DIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQEL 685
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ S V ++ AF K+ I + + I++ +K P++ Y ++ +L R R
Sbjct: 686 QDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRY 745
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D+ M+ AG PD NTLL D + + + E+G++P+ TY L
Sbjct: 746 RDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTL 805
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I + R EE L N+M ++ + P + Y+SL+ K + A +FEE+ S
Sbjct: 806 IVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRS 862
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN- 182
L F H+ G + +N ++ + R GR +D+ +M+ + PD +S+NTL+N
Sbjct: 53 LRFPHLPGATVQ----VFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINAR 108
Query: 183 -----LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L DL L E+ + G++PD++TY LI + + N+++++ +F +M
Sbjct: 109 AKSGCLAPGSAFDLLL----EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMAS 164
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ RP ++ Y +++ + GK A +F E+
Sbjct: 165 ECRPDLWTYNAMVSVHGRCGKAQDAERMFREL 196
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 3/235 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + + G A R+ + L +K F P+A YN +L A A+ D D ++ ++L+
Sbjct: 174 NAMVSVHGRCGKAQDAERMFRELVEKG-FKPDAVTYNSLLYAFAKEGDADTVERVCEELV 232
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + L +E+ + + +I + K +I
Sbjct: 233 RAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRIS 292
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + + + KP L+T++ ++ + GR + + F+ M +GV PD ++Y +L
Sbjct: 293 DAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVML 352
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ + + + + ++ M G +PD Y ++ + + +E + DM+
Sbjct: 353 DIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDME 407
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 79/204 (38%), Gaps = 35/204 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ ++N ++ + + +K + ++ I +P+ TYN ++ + R R +
Sbjct: 764 LTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLN 823
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE------------------------ 198
M + G+ P SY +LL K + + F E
Sbjct: 824 EMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDAC 883
Query: 199 -----------MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
M E GI+P + T L+ S+G G+ +E+ ++ N +K + S Y
Sbjct: 884 NHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYS 943
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
++ + K G +L +T EM +
Sbjct: 944 TVFNAYLKNGDYNLGITKLLEMKA 967
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE--ESLRLFND 233
+N ++ + R D M ++PDL+++ LI++ ++G + + L +
Sbjct: 66 FNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLE 125
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++Q +RP + Y +LI + +D A+ +FEEM +S
Sbjct: 126 VRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMAS 164
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 50/115 (43%)
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA + +K +P + T +I++ G G ++ S+K + + + Y+T+
Sbjct: 887 KAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVF 946
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
N K +L + EM G+KPD +T I + +++ L N ++
Sbjct: 947 NAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAASLCERTADAILLLNSLR 1001
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 136/272 (50%), Gaps = 12/272 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
+GY+ + K + A+RLL+ +++ P+ YNC++ + ++ + +IL D+
Sbjct: 25 HGYLRQKSK---LDHALRLLEVMKESGK-KPDEILYNCLVNGLVNSGRLEAAEKILDDMK 80
Query: 61 VSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + YTN + + DC +L F E + SP S N +I + +
Sbjct: 81 QDKVSANLVTYTNLIKEYANAGRLQDCRKL--FQEMKDKGESPNS-WTYNALIQGYGRKG 137
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++AL ++D + G+ C D+ TYNI + + G+ G + DM M GV PD ++YN
Sbjct: 138 LFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYN 197
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TLL+ K REM E+G +P++ TY ++ S + ++ E+ +LF ++K +
Sbjct: 198 TLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSK 257
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P+I Y +++ + G A +++EM
Sbjct: 258 GVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEM 289
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 13/272 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I++ AG + +L Q ++DK PN+ YN ++ + ++ ++
Sbjct: 95 IKEYANAGRLQDCRKLFQEMKDKGES-PNSWTYNALIQGYGRKGLFKEALELYDEM--DG 151
Query: 64 RTLSSDCYT-NFARAFI----MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D +T N A A + +D +LL +E+ P + N ++ +AK
Sbjct: 152 VGCAKDVHTYNIAIAMYGKRGLLEDMERLL---DEMDTKGVPPDQVTYNTLLDVYAKKSY 208
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
KA I + +P++ TYNI+L + V + F ++K GVVP+ ++Y+
Sbjct: 209 FVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSA 268
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+L+ + + EM E+G P ++ Y+ LI+S+G G +E+L F DM++
Sbjct: 269 MLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSG 328
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I P +Y +L+D K G+ A ++ EM
Sbjct: 329 IVPDTKIYTALMDAYGKAGRCREAELLYFEMT 360
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 86/169 (50%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ E+ + +I N ++ + K + + +A +F+++K P+++TY+ +L + GR
Sbjct: 216 LREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGR 275
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + + M EAG +P I+Y+ L+ + L F++M +SGI PD
Sbjct: 276 HGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKI 335
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
YTAL+D++G+ G E+ L+ +M ++ P Y L+ G++
Sbjct: 336 YTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 1/171 (0%)
Query: 102 SIIVVNRIIFAFAKSR-QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++ II + + + +++ AL + + +K KPD I YN +++ L GR+
Sbjct: 16 TVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKI 75
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
MK+ V + ++Y L+ RL C F+EM + G P+ TY ALI +GR
Sbjct: 76 LDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGR 135
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G +E+L L+++M ++ Y I K G ++ + +EM++
Sbjct: 136 KGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDT 186
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I+ N ++ S ++E A I D +K K +L+TY ++ GR+ D F
Sbjct: 54 ILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQE 113
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK+ G P+ +YN L+ + L + EM G D+ TY I +G+ G
Sbjct: 114 MKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGL 173
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RL ++M + + P Y +L+D K A I EM +
Sbjct: 174 LEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEA 222
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 146/313 (46%), Gaps = 43/313 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN SAA+RLL S+ KN PN AYN ++ + + + +F + +++ +
Sbjct: 140 INGLCKVGNTSAAIRLLGSMVQKNC-QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV--T 196
Query: 64 RTLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ +S D +T + + + C + + E+V ++ N ++ A K ++ +
Sbjct: 197 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 256
Query: 122 ALLIFDH-IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + D I+ C P++I+YN +++ ++ R++ + F M ++PD ++Y+TL+
Sbjct: 257 AHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 316
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL-------------------------- 214
+ L + RL + F EM P+L+TY L
Sbjct: 317 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLD 376
Query: 215 ---------IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
ID R G +E + LF+++ + ++P ++ Y +I+ L + G +D A +
Sbjct: 377 PDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 436
Query: 266 FEEMNSSLSDLAG 278
F EM+ + L G
Sbjct: 437 FREMDENGCTLNG 449
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 2/187 (1%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAK--SRQIEKALLIFDHIKGLKCKPDLITYN 142
+ LL ++ P +I ++ +I +F +I +AL +FD + G +PD++TY
Sbjct: 78 STLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYG 137
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+++ L +VG + + SM + P+ +YNT++++L K R++ F EM
Sbjct: 138 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 197
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
GI PD+ TY +LI + + L N+M +I P + + +++D L K GKV A
Sbjct: 198 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 257
Query: 263 MTIFEEM 269
+ ++M
Sbjct: 258 HDVVDKM 264
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ +I K A+ + + C+P++ YN ++D L + +V + N F+
Sbjct: 133 VVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFS 192
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G+ PD +YN+L++ L + EM +S I PD++++ ++D+ + G
Sbjct: 193 EMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG 252
Query: 223 NIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E+ + + M Q+ P++ Y +LI+ K+ ++D AM +F EM
Sbjct: 253 KVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV-- 151
++++ P S + N+++ + AK + L + + P++ T +I+++ +
Sbjct: 52 MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNR 111
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G++ + L+ F M G PD ++Y TL+N L K+ + M + +P++ Y
Sbjct: 112 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 171
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+IDS + + E+ LF++M + I P I+ Y SLI L + + T+ EM
Sbjct: 172 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 229
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 102/234 (43%), Gaps = 2/234 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK G V+ A ++ + + +PN +YN ++ + ID + + ++
Sbjct: 242 NTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 301
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y+ + + E+V + +++ ++ K+R +
Sbjct: 302 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 361
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + I+G PD+ NI +D + R G + + F+++ G+ PD +Y+ ++
Sbjct: 362 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 421
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
N L + LD FREM E+G + Y + F R +++L +M
Sbjct: 422 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 1/180 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+++ + Q +P +++ N II + K+R IEKAL ++ L P Y+ ++
Sbjct: 32 YLKRMPQHCAP-NVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFC 90
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G V+ ++ FA M G PD +++N LL+ L + R++ FR M G KPD++
Sbjct: 91 KTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVV 150
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + ++E++ L MKQ+ + P+ Y +LID+L K ++ A +FE+M
Sbjct: 151 TYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKM 210
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 136/277 (49%), Gaps = 8/277 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCKAG ++ A L+ R PN +YN ++ + +I+ + L+++
Sbjct: 14 NNLISCLCKAGMLAEAESYLK--RMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREME 71
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ Y++ ++F T + ++ + +F E + P+ I+ N ++ ++R+I
Sbjct: 72 ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPD-IVNFNVLLSGLWRARKI 130
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A +F + CKPD++TYN ++ L + ++++ + MK+ V P F++Y TL
Sbjct: 131 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 190
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+++L K RL F +M E Y+ L + R G + E+ R+++DM ++ +
Sbjct: 191 IDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNV 250
Query: 240 RPSIYVYRSLIDNLKKM--GKVDLAMTIFEEMNSSLS 274
+ Y ++ L KM G V+ A + E M ++
Sbjct: 251 CMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIA 287
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 7/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCKA A + Q +R + I P YN +L T + + ++ +L
Sbjct: 297 INGLCKARRPGEAKEMFQEMRGRGIS-PTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQG 355
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R + Y R F D + +++++ + N +I F K A
Sbjct: 356 RLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAW 415
Query: 124 LIFDHIKGLK----CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++F ++ K P++ TY I++ L + +V + ++M++ G VP + L
Sbjct: 416 MLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVL 475
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L + RLD ++EM + + + L+D R G+++E+ M I
Sbjct: 476 LSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGI 535
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y L+ L GK D A + EE+
Sbjct: 536 VPDKFTYDKLVVGLCWQGKADQARKLVEEL 565
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E A L+ + + G K PD Y+I+++ L + R + F M+ G+ P ++YNT
Sbjct: 272 VEAAKLVTEMM-GKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 330
Query: 179 LLNNLRKIRRLD--LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
LL L +L + L YF M + G PD +Y +I F G+ E+ LF DM +
Sbjct: 331 LLEGLLSTAKLQDAMELTYF--MLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIK 388
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
I + + Y +I K A +F+ M S +D
Sbjct: 389 DGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKND 427
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 39/201 (19%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K+R+ +A +F ++G P ++TYN +L+ L ++ D + M + G
Sbjct: 296 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQG 355
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI------------------------ 204
+PD SYN ++ + F++M + GI
Sbjct: 356 RLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAW 415
Query: 205 ---------------KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
P++ TY LI S +T +EE+ +L + M+ + PS+ ++ L
Sbjct: 416 MLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVL 475
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
+ L + G++D A +++EM+
Sbjct: 476 LSRLARAGRLDDAFELYKEMS 496
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M EAG+ P+ I YN L++ L K L Y + M + P++++Y +ID + + N
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
IE++L +M++ P+ + Y S++ + K G V AM +F EM +
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPA 107
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/149 (17%), Positives = 70/149 (46%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ + ++ A++ +++ A ++ + + C+ + + NI+LD + R G V++ +
Sbjct: 468 SLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFL 527
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G+VPD +Y+ L+ L + D E+ G +P+ L+ +
Sbjct: 528 KQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQ 587
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
G+ + + + + + ++ ++ +L+
Sbjct: 588 GDFQGAYEFYCWLPSVGVEVTLGMHNTLV 616
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 2/272 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G + LL+ ++ NI PN YNC++ + + D + ++ + +
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN 420
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + F E+ + +I AF I
Sbjct: 421 EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNIN 480
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ F+ + C PD + Y ++ L GR+ND + +K AG D YN L+
Sbjct: 481 RAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLI 540
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K ++L+ EM E+G+KPD +TY LI G+TG+ + ++ M ++ +R
Sbjct: 541 SGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLR 600
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
PS+ Y ++I VD M IF EM S+
Sbjct: 601 PSVVTYGAIIHAYCSKKNVDEGMKIFGEMCST 632
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 98/178 (55%), Gaps = 7/178 (3%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKG------LKCKPDLITYNIVLDILGRVGRVN 155
S++ ++ K+R+I++AL +FD ++G + +PD++ +N ++D L +VG+
Sbjct: 315 SVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEE 374
Query: 156 DMLNEFASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D L+ MK + P+ ++YN L++ K D FR+M E G++P+++T L
Sbjct: 375 DGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTL 434
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+D + G + ++ FN+MK + ++ + Y +LI + ++ AM FEEM SS
Sbjct: 435 VDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSS 492
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 120/269 (44%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N ++ LCK G V AV ++ K + A Y ++ A N+I+ + Q +++L
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S + + Y + + + + ++ N +I F K +++E+
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLER 551
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ ++ KPD ITYN ++ LG+ G M + G+ P ++Y +++
Sbjct: 552 VYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIH 611
Query: 182 NLRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +D + F EM S + P+ + Y LID+ R +++ ++ L DMK +++R
Sbjct: 612 AYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVR 671
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y +++ ++ + A + + M
Sbjct: 672 PNTTTYNAILKGVRDKKMLHKAFELMDRM 700
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 137 DLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
D + N +L LGR + R+N++L A M++ + P +++ L+N+L K RR+D L
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELL---AEMEKRKIRPSVVTFGILVNHLCKARRIDEAL 336
Query: 194 IYF---REMGES---GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI-RPSIYVY 246
F R G S G++PD++ + LID + G E+ L L +MK I RP+ Y
Sbjct: 337 QVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTY 396
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMN 270
LID K G D A +F +MN
Sbjct: 397 NCLIDGFFKAGNFDRAHELFRQMN 420
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 103/239 (43%), Gaps = 3/239 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC AG ++ A ++ L+ L + YN ++ + ++ +++L ++ +
Sbjct: 505 ISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGV 564
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y T D +E++++ S++ II A+ + +++ +
Sbjct: 565 KPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMK 624
Query: 125 IFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF + K P+ + YNI++D L R V+ ++ MK V P+ +YN +L +
Sbjct: 625 IFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGV 684
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
R + L M E +PD +T L + G IE+ L+ F + Q P+
Sbjct: 685 RDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK-LKHFVEGYQDSSYPA 742
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 13/115 (11%)
Query: 164 MKEAGVVPDFISYNTLLNNL---RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
M+ G V D S N LL L R I+R++ L EM + I+P ++T+ L++ +
Sbjct: 273 MRLGGAV-DAASCNALLTWLGRGRDIKRMNELLA---EMEKRKIRPSVVTFGILVNHLCK 328
Query: 221 TGNIEESLRLFNDMKQQ------QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+E+L++F+ ++ + + P + ++ +LID L K+GK + +++ EEM
Sbjct: 329 ARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM 383
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 139 ITYNIVLDILGRVGRV---NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
+T IV L R GR +++ A + E GV PD L+ L ++ +
Sbjct: 209 VTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEV 268
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+ G D + AL+ GR +I+ L +M++++IRPS+ + L+++L K
Sbjct: 269 LHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCK 328
Query: 256 MGKVDLAMTIFEEM 269
++D A+ +F+ +
Sbjct: 329 ARRIDEALQVFDRL 342
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 127/258 (49%), Gaps = 3/258 (1%)
Query: 14 NVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+ A+RL Q +++ PN YN +L + + ++L ++ + + + Y
Sbjct: 160 HCQEALRLFQEMKEAGC-CPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTY 218
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
A+ C + + ++ +I AF ++ + EKAL F ++
Sbjct: 219 NELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRK 278
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
C P+++TYNI++DI GR+ +++DM+ F M+E PD +++N+LL + L
Sbjct: 279 TNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTE 338
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
FREM +G P + T+ LI+ +GR G ++ S+ ++ + + ++P++ + +L+
Sbjct: 339 VSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMA 398
Query: 252 NLKKMGKVDLAMTIFEEM 269
+L + G+ + +EM
Sbjct: 399 SLAREGRWQQCEKVSQEM 416
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ I V N +I AK IE+A+ + + I+ + KPD +TYN ++ + GR G +
Sbjct: 493 SPD-IKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAE 551
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ M+ AG P+ I+YNTLL + K R+D F +M + ++PD T+ L+ S+
Sbjct: 552 EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSY 611
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
G +E+L + M + +P+ +++L+D
Sbjct: 612 SSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 645
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
FQ +KDL +S + Y A I C + L +E+ + + + N ++
Sbjct: 133 FQEMKDLEISPDDYT---YNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDV 189
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+ K ++A + ++ P+++TYN ++ R G ++ S+ G+ PD
Sbjct: 190 YGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPD 249
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+Y TL++ + R + L F EM ++ P+++TY LID +GR +++ +++F
Sbjct: 250 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 309
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M+++ P + + SL+ + G + +F EM
Sbjct: 310 FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREM 346
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 4/181 (2%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-F 161
+ +I +++R+ ++ + +F+ ++ + + +TYN++LD+ G+ G D + F
Sbjct: 74 VYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLF 133
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK+ + PD +YNT++ + L F+EM E+G P+ +TY AL+D +G+
Sbjct: 134 QEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 193
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
G +E+ L +M+ I P+I Y LI + G D A + S LS P +
Sbjct: 194 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAAL---KKSLLSKGLCPDE 250
Query: 282 F 282
F
Sbjct: 251 F 251
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIA-SPESIIVVNRIIFA 112
++ +++ + LS C+ ++ + QL +I+E+ + A P S I+ + A
Sbjct: 411 KVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLA 470
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+ K +A L + + PD+ +N ++ + + G + + +++A + PD
Sbjct: 471 YCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPD 530
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++YN L++ + EM +G P+L+TY L+ S+ + G ++++ R+F
Sbjct: 531 GVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFG 590
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
DM ++RP + + +L+ + +G A+++ E M
Sbjct: 591 DMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMT 628
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K G A LL + I PN YN ++ A A D + + K LL
Sbjct: 184 NALLDVYGKGGMHKEASELLVEMEAAGIS-PNIVTYNELIAAYARAGLCDEAAALKKSLL 242
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S+ L D Y AF + + L E+ + +I+ N +I + + +
Sbjct: 243 --SKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEK 300
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ + +F ++ C PDL+T+N +L G G + ++ N F MK AG +P ++N
Sbjct: 301 LDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNI 360
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + +D + ++ + +G++P + T+ AL+ S R G ++ ++ +M +
Sbjct: 361 LIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAG 420
Query: 239 IRPSIYVYRSLIDNLKKMGK 258
++ S + LI + G+
Sbjct: 421 LQLSDACHAGLIHSYANSGQ 440
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP-DLITYNIVLDILGRVGRVNDMLNEFA 162
+ I+ Q+ AL +F+ +K + D+ Y ++ IL R R ++ + F
Sbjct: 39 VATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFE 98
Query: 163 SMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+M+ G + ++YN +L+ ++ D F+EM + I PD TY +I + +
Sbjct: 99 TMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQN 158
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +E+LRLF +MK+ P+ Y +L+D K G A + EM ++
Sbjct: 159 SHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAA 209
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+EE+ + + N ++ + + KA + ++ P+LITYN +L
Sbjct: 518 LLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYT 577
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ GR++D F M A V PD ++NTL+ + + L M E G +P +
Sbjct: 578 KHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQI 637
Query: 210 TYTALIDSF 218
T+ AL+D +
Sbjct: 638 TFKALLDGY 646
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
DD ++ F++E + +P+ ++ N ++ +F + + +F +K P + T+
Sbjct: 302 DDMMKVFKFMQE--KNCTPD-LVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTF 358
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
NI+++ GR G V+ ++ + + G+ P ++ L+ +L + R C +EM E
Sbjct: 359 NILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAE 418
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+G++ + LI S+ +G + + +++++ +P
Sbjct: 419 AGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP 458
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC+A V A LL + +K I PNA Y + +++ +I ++ + KD+L
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGI-KPNAHTYGAFINLYSKSGEIQVAERYFKDML 583
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S ++ YT + + + L + +++ I + II + +K+ + +
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F PD+ YN ++ + G + + M G+ P+ + YNTL+
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K+ + F E+ E + PD++TY+ +ID + ++GN+ E+ +LF++M + I
Sbjct: 704 NGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGIS 763
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
P Y+Y LID K G ++ A+++F E
Sbjct: 764 PDGYIYCILIDGCGKEGNLEKALSLFHE 791
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ +I A K + K ++ ++ +CKP+L TYN + L + G V++ L
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G+ PD +Y L++ K +R + F M SG+ P+ TYTALID F + G
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
NIEE+LR+ ++M + ++ ++ Y ++I + K G++ AM++F EM
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 133/268 (49%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLL-QSLRD---KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I LC + ++ A +L Q +R+ N+F+ Y ++ A + + +++ ++LK ++
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFM---YGTLIKAYVQESRYEMAIELLKIMIA 514
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ CY + + + ++ + + I ++KS +I+
Sbjct: 515 NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQV 574
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A F + P+ + Y I++ VG + L+ F M E G++PD +Y+ +++
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIH 634
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L K + + F + ++G+ PD+ Y +LI F + G+IE++ +L+++M I P
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINP 694
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I VY +LI+ L K+G+V A +F+E+
Sbjct: 695 NIVVYNTLINGLCKLGEVTKARELFDEI 722
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 135/277 (48%), Gaps = 18/277 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G V+ A L + +K++ +P+ Y+ ++ ++ ++ +F++ +++
Sbjct: 700 NTLINGLCKLGEVTKARELFDEIEEKDL-VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMI 758
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQ-------LLIFIEEVVQIASPESIIVVNRIIFAF 113
S+ +S D Y I+ D C + L +F E Q S S+ N +I +F
Sbjct: 759 --SKGISPDGYI----YCILIDGCGKEGNLEKALSLFHE--AQQKSVGSLSAFNSLIDSF 810
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K ++ +A +FD + K P+++TY I++D G+ + + F M+ ++P+
Sbjct: 811 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 870
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++Y +LL + +I + F++M GI D + Y + ++ + G E+L+L N
Sbjct: 871 LTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ I+ V+ +LI +L K ++ + + EM
Sbjct: 931 SLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 967
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 130/302 (43%), Gaps = 37/302 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C GN A+ + + +K + +P+ AY+ ++ + ++ + + L +
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGL-IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + F D + +E++ +I+V N +I K ++ KA
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD I+ PD++TY+ ++D + G + + F M G+ PD Y L++
Sbjct: 717 ELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 776
Query: 184 RKIRRLDLCLIYFRE----------------------------------MGESGIKPDLL 209
K L+ L F E M + + P+++
Sbjct: 777 GKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 836
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TYT LID++G+ +EE+ +LF DM+ + I P+ Y SL+ + ++G +++F++M
Sbjct: 837 TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 896
Query: 270 NS 271
+
Sbjct: 897 EA 898
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ K GN+ A+R+ + + + L YN ++ A+ ++ + + ++L++
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y ++ + D + + E+ S + +I S ++KA
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + KP++ Y ++ + R + M GV+PD YN L+ L
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++++ + +MGE GIKP+ TY A I+ + ++G I+ + R F DM I P+
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y LI +G A++ F+ M
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCM 617
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 124/265 (46%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ K+ +++ A LL ++ + + P Y+ ++ ++D+ + ++L ++ +
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y +A++ + ++ ++ + N +I +++++E+A +
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + KP+ TY +++ + G + F M +G+VP+ + Y L+
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC 602
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ L F+ M E G+ PD+ Y+A+I S + G +E++ +F + + P ++
Sbjct: 603 DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLI K G ++ A +++EM
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEM 687
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 18/281 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK---NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
I+ CK G+V +L + + N+F YN + +T +D + ++ K ++
Sbjct: 249 IKAHCKVGDVIKGKMVLSEMEKECKPNLF---TYNAFIGGLCQTGAVDEALEVKKLMMEK 305
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF-----AFAKSR 117
YT F + + E + P S + NR + F K
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM-----PSSGLNPNRFTYTALIDGFIKEG 360
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
IE+AL I D + K +++TYN ++ + + G + ++ F M AG+ PD +YN
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYN 420
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ K + EM + P TY+ LI + +++++ + + M +
Sbjct: 421 LLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRN 480
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
++P++++Y +LI + + ++A+ + + M N L DL
Sbjct: 481 GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 133/310 (42%), Gaps = 44/310 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-----ETNDIDLSFQILK 57
N +I LC+ G V A+ + + + +K + P+ + L+ + + L F+ +
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLG-PDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ + YT FI + + L +E++ +++ N +I AK+
Sbjct: 339 SSGLNPNRFT---YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMK--------- 165
++ KA+ +F+ + +PD TYN+++D + + + ++L E + K
Sbjct: 396 EMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYS 455
Query: 166 -----------------------EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
GV P+ Y TL+ + R ++ + + M +
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G+ PDL Y LI R +EE+ L DM ++ I+P+ + Y + I+ K G++ +A
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVA 575
Query: 263 MTIFEEMNSS 272
F++M SS
Sbjct: 576 ERYFKDMLSS 585
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
+L ++I +D +G +N+ + F + G P I N L+ +L K + L +
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M E+ I PD+ TYT +I + + G++ + + ++M +++ +P+++ Y + I L +
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289
Query: 257 GKVDLAMTI 265
G VD A+ +
Sbjct: 290 GAVDEALEV 298
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 140/282 (49%), Gaps = 18/282 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K G + A L ++DK IF P+ Y+C++ + + ++L+++LV
Sbjct: 159 IDGLWKDGRHTDAQNLFIEMQDKGIF-PDIVTYSCMINGFCSSGKWSEAQRLLQEMLV-- 215
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R +S D ++ A + D ++E++ +++ N ++ S +++
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKD 275
Query: 122 ALLIFDHIKGL-----------KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
AL +F ++ +PD+ TYNI++ L G+ + + M G+V
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 335
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++Y++++N L K RLD F MG P+++T+ LI + + G +++ L L
Sbjct: 336 PDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F +M ++ I + Y +LI +K+G ++ ++ IF+EM SS
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q+ P +++ ++ + ++ +A+ + D + +P+ ITY ++D + ++G
Sbjct: 75 QMCKP-NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133
Query: 156 DMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
LN M+E + + PD + Y+ +++ L K R F EM + GI PD++TY+ +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+ F +G E+ RL +M ++I P + + LI+ L K G ++ A + +EM SS
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 78/148 (52%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
KPD++ Y+ ++D L + GR D N F M++ G+ PD ++Y+ ++N +
Sbjct: 149 KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQR 208
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+EM I PD++T++ LI++ + G++ + L +M + P++ +L+D L
Sbjct: 209 LLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLC 268
Query: 255 KMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
GK+ A+ +F+ M S+ D+ F
Sbjct: 269 DSGKLKDALEMFKAMQKSMMDIDATHAF 296
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
I+ +QI P I N +I F ++ AL F + L P L+T+N +L L
Sbjct: 5 IKHGLQI--PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCV 62
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
RV++ L+ F M + P+ +++ TL+N L + R+ + M E G++P+ +T
Sbjct: 63 EDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT 118
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++D + G+ +L L M++ I+P + +Y ++ID L K G+ A +F EM
Sbjct: 119 YGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM 178
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDK--NIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
CN ++ LC +G + A+ + ++++ +I +A+N V +T +I +S I +
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV-EPDVQTYNILISGLINEGK 318
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + L Y I+ D + + +I K ++
Sbjct: 319 FLEAEEL----YEEMPHRGIVPD--------------------TVTYSSMINGLCKQSRL 354
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +FD + P+++T+N ++ + G V+D L F M G+V + I+Y TL
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ RK+ ++ L F+EM SG+ PD +T ++ ++++L + +++
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL- 145
LL +EE+ I P+ +++ + II K + A +F ++ PD++TY+ ++
Sbjct: 138 LLRKMEELSHI-KPD-VVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMIN 195
Query: 146 -------------------------DILGRVGRVNDMLNE---------FASMKEAGVVP 171
D++ G +N ++ E M +GV P
Sbjct: 196 GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCP 255
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGES-----------GIKPDLLTYTALIDSFGR 220
+ ++ NTLL+ L +L L F+ M +S G++PD+ TY LI
Sbjct: 256 NVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLIN 315
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G E+ L+ +M + I P Y S+I+ L K ++D A +F+ M S
Sbjct: 316 EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 132/266 (49%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC NV+ A+ L + +K I PN YN ++ + ++L D++
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ AF+ + +E+++ + I + +I F +++
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + C P+++TYN ++ + RV++ + F M + G+V + ++Y TL+
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + R D I F++M G+ PD++TY+ L+D G +E +L +F +++ ++
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
P IY Y +I+ + K GKV+ +F
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ ++V++ N +I + + +A+ + D + C+PDL+TY IV++ L
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ L+ M++ + P + YNT+++ L + ++ L F EM GI+P+++
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +LI G ++ RL +DM +++I P++ + +LID K GK+ A +++EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
VV+ P+ ++ ++ K I+ AL + ++ K +P ++ YN ++D L
Sbjct: 213 VVKGCQPD-LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
VND LN F M G+ P+ ++YN+L+ L R +M E I P+++T++A
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LID+F + G + E+ +L+++M ++ I P I+ Y SLI+ ++D A +FE M S
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL---- 59
+ LCK G++ A+ LL+ + I P YN ++ A +++ + + ++
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKI-EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+V+ +L C N+ R D ++LL ++++ +++ + +I AF K
Sbjct: 287 IRPNVVTYNSLIR-CLCNYGRW----SDASRLL---SDMIERKINPNVVTFSALIDAFVK 338
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A ++D + PD+ TY+ +++ R+++ + F M P+ ++
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNTL+ K +R+D + FREM + G+ + +TYT LI F + + + +F M
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y L+D L GKV+ A+ +FE + S
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 110/233 (47%), Gaps = 3/233 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C + A + + + K+ F PN YN ++ + +D ++ +++
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT F +C I +++V I+ + ++ + ++E AL
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++F++++ K +PD+ TYNI+++ + + G+V D + F S+ GV P+ ++Y T+++
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ + FREM E G PD TY LI + R G+ S L +M+
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 94/180 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ + ++ + +I F + Q+ AL + + L +PD++T N +L+
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R++D ++ M E G PD ++NTL++ L + R + M G +PDL+TY
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ + G+I+ +L L M+Q +I P + +Y ++ID L V+ A+ +F EM++
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 6/212 (2%)
Query: 66 LSSDCYTNFA------RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+S DC+ N + F + + E+ Q + + +I F ++R+
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A ++F + PD++TY+I+LD L G+V L F ++ + + PD +YN +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + K +++ F + G+KP+++TYT ++ F R G EE+ LF +MK++
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P Y +LI + G + + EM S
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 87/168 (51%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ ++++ A AK + + + + + ++ L +L TY+I+++ R +++ L
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A M + G PD ++ N+LLN R+ + +M E G +PD T+ LI R
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E++ L + M + +P + Y +++ L K G +DLA+++ ++M
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/152 (18%), Positives = 77/152 (50%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ +F + + P ++ ++ +L + ++ + + +++ M+ G+ + +Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + +L L L +M + G +PD++T +L++ F I +++ L M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P + + +LI L + + A+ + + M
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 129/270 (47%), Gaps = 3/270 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G + A +L+ + ++ P+ Y V+ +D + ++++++ +
Sbjct: 84 INGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKG 143
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES-IIVVNRIIFAFAKSRQIEKA 122
++ + + L +E++ +S + ++ +I F KS +EKA
Sbjct: 144 VEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKA 203
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + ++G KC P+++TY+ +L L + G ++ L+ F M G VP+ ++Y TL++
Sbjct: 204 MKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHG 263
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L ++D + EM + PD ++Y AL+D + R G IEE+ +LF +M + P
Sbjct: 264 LCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPD 323
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y L+ +++ A + E M ++
Sbjct: 324 RITYTCLVRGFCNASRLEEARFLLENMKTA 353
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/302 (18%), Positives = 126/302 (41%), Gaps = 39/302 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK+GN+ A+++L + + +PN Y+ +L + D+D + + + +
Sbjct: 191 IDGFCKSGNLEKAMKMLGVMEGRKC-VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 249
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + ++E+ P + N ++ + + +IE+A
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAK 309
Query: 124 LIFDHIKGLKC------------------------------------KPDLITYNIVLDI 147
+F + C PD++TY+IV+
Sbjct: 310 QLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAG 369
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
R R + M V P+ ++Y++L++ L K R+D + + M ++P
Sbjct: 370 YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPS 429
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ T+ ++I + R G+++E+ +L M + P + Y +L++ + G++++A +FE
Sbjct: 430 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 489
Query: 268 EM 269
M
Sbjct: 490 VM 491
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 11/276 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC A V AA RLL P+ +YN +L I+ + Q+ K++ S
Sbjct: 261 IHGLCAAHKVDAA-RLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA-FAKSRQIEKA 122
YT R F + +E + A + +V I+ A ++++++ +A
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 379
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ P+ +TY+ ++D L + GRV+ + +M V P ++N+++
Sbjct: 380 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGA 439
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L ++ +D M G++P ++TYT L++ F RTG +E + LF M+++ + S
Sbjct: 440 LCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSS 499
Query: 243 I-------YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +LI L K ++D AM + EE+ S
Sbjct: 500 SAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRS 535
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ II F K+ Q+++AL F+ ++ P+ TYN+V++ L + +
Sbjct: 6 TVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVL 64
Query: 162 ASMKEA-GVVPDFISYNTLLNNLRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFG 219
M++ V PD ++Y+T++N K +D REM GI PD++TYT+++D
Sbjct: 65 KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
R G ++ + + +MK + + P + + +LI KVD A+ +++E+ +S S
Sbjct: 125 RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
++C+P ++T+ I++D + ++ L F M+E V P+ +YN ++N L K R
Sbjct: 1 MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSK 59
Query: 192 CLIYFREM--GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRS 248
+EM G+S + PDL+TY+ +I+ F + G ++ + + +M + I P + Y S
Sbjct: 60 AYEVLKEMRDGKS-VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118
Query: 249 LIDNLKKMGKVDLAMTIFEEMN 270
++D L + GK+D A + EM
Sbjct: 119 VVDGLCRDGKMDRACEMVREMK 140
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/286 (17%), Positives = 114/286 (39%), Gaps = 60/286 (20%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C+ G + A +L + + K+ LP+ Y C++ + ++ + +L+++
Sbjct: 293 NALLDGYCRLGRIEEAKQLFKEMATKSC-LPDRITYTCLVRGFCNASRLEEARFLLENMK 351
Query: 61 VSSRTLSSDCYT------NFARA--FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
++ + D T ++RA F+ + FI+E++ + + + +I
Sbjct: 352 TAA-GIDPDVVTYSIVVAGYSRAKRFVEAAE------FIQEMIARNVAPNAVTYSSLIDG 404
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K+ +++ A+ + ++ + +P + T+N V+ L R+G +++ +M G+ P
Sbjct: 405 LCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 464
Query: 173 FISYNTLLNN------------------------------------------LRKIRRLD 190
++Y TLL L K R +D
Sbjct: 465 MVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREID 524
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ E+ +P A++D R G EE+ +L N + +
Sbjct: 525 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 570
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 140/282 (49%), Gaps = 18/282 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K G + A L ++DK IF P+ Y+C++ + + ++L+++LV
Sbjct: 159 IDGLWKDGRHTDAQNLFIEMQDKGIF-PDIVTYSCMINGFCSSGKWSEAQRLLQEMLV-- 215
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R +S D ++ A + D ++E++ +++ N ++ S +++
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKD 275
Query: 122 ALLIFDHIKGL-----------KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
AL +F ++ +PD+ TYNI++ L G+ + + M G+V
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 335
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++Y++++N L K RLD F MG P+++T+ LI + + G +++ L L
Sbjct: 336 PDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F +M ++ I + Y +LI +K+G ++ ++ IF+EM SS
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q+ P +++ ++ + ++ +A+ + D + +P+ ITY ++D + ++G
Sbjct: 75 QMCKP-NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133
Query: 156 DMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
LN M+E + + PD + Y+ +++ L K R F EM + GI PD++TY+ +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+ F +G E+ RL +M ++I P + + LI+ L K G ++ A + +EM SS
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 78/148 (52%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
KPD++ Y+ ++D L + GR D N F M++ G+ PD ++Y+ ++N +
Sbjct: 149 KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQR 208
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+EM I PD++T++ LI++ + G++ + L +M + P++ +L+D L
Sbjct: 209 LLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLC 268
Query: 255 KMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
GK+ A+ +F+ M S+ D+ F
Sbjct: 269 DSGKLKDALEMFKAMQKSMMDIDATHAF 296
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
I+ +QI P I N +I F ++ AL F + L P L+T+N +L L
Sbjct: 5 IKHGLQI--PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCV 62
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
RV++ L+ F M + P+ +++ TL+N L + R+ + M E G++P+ +T
Sbjct: 63 EDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT 118
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++D + G+ +L L M++ I+P + +Y ++ID L K G+ A +F EM
Sbjct: 119 YGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM 178
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 106/236 (44%), Gaps = 27/236 (11%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDK--NIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
CN ++ LC +G + A+ + ++++ +I +A+N V +T +I +S I +
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV-EPDVQTYNILISGLINEGK 318
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + L Y I+ D + + +I K ++
Sbjct: 319 FLEAEEL----YEEMPHRGIVPD--------------------TVTYSSMINGLCKQSRL 354
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +FD + P+++T+N ++ + G V+D L F M G+V + I+Y TL
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ RK+ ++ L F+EM SG+ PD +T ++ ++ +L + +++
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL- 145
LL +EE+ I P+ +++ + II K + A +F ++ PD++TY+ ++
Sbjct: 138 LLRKMEELSHI-KPD-VVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMIN 195
Query: 146 -------------------------DILGRVGRVNDMLNE---------FASMKEAGVVP 171
D++ G +N ++ E M +GV P
Sbjct: 196 GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCP 255
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGES-----------GIKPDLLTYTALIDSFGR 220
+ ++ NTLL+ L +L L F+ M +S G++PD+ TY LI
Sbjct: 256 NVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLIN 315
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G E+ L+ +M + I P Y S+I+ L K ++D A +F+ M S
Sbjct: 316 EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 131/273 (47%), Gaps = 9/273 (3%)
Query: 3 NGY---IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKD 58
+GY I LCK GN A +LL ++R K AY+ ++ + N ++ + ++++
Sbjct: 46 SGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEK 105
Query: 59 LLVSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ +R D Y T L +EE+ + N ++ +
Sbjct: 106 M---ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQE 162
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++E+A L+F+ + + P+++TYN +++ L + R+ F M G VP +SY
Sbjct: 163 EKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSY 222
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NTL++ K + L F +M S P+++TYT LID ++G ++ + + + M +
Sbjct: 223 NTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVK 282
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + P++ Y LID K+ +VD A + E+M
Sbjct: 283 KGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQM 315
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 11/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDID---LSFQILKDLL 60
+E+LCK + A+ ++ + + I P+A YN VL + ++ L F+ +
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGI-KPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 61 VSSRTLSSDCYTN-FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ ++ + N +A+ + T +F E + P + N +I F K + +
Sbjct: 180 INPNVVTYNTLINGLCKAWRIE---TAYELFKEMAGKGYVPTEV-SYNTLIDGFCKKKDL 235
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A +FD + C P+++TY ++D L + G+V M + GV P+ +Y+ L
Sbjct: 236 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 295
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K+RR+D +M GI P ++TY L++S R +E++ +LF M Q++
Sbjct: 296 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 355
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +L+ L ++D A ++ EM
Sbjct: 356 HPTVVTYNTLLRALCHHKQLDGAHRLYAEM 385
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+ V A L + + + I PN YN ++ + I+ ++++ K++
Sbjct: 153 NFVLSGLCQEEKVEEARLLFEKMVKQRIN-PNVVTYNTLINGLCKAWRIETAYELFKEMA 211
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y F D +++V+ +++ +I +KS +++
Sbjct: 212 GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQ 271
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + D + P++ TY+ ++D +V RV++ M G+ P ++YN LL
Sbjct: 272 AAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILL 331
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N+L + +L+ FR M + P ++TY L+ + ++ + RL+ +M +
Sbjct: 332 NSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCP 391
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P Y +L L + GKV A + E+M
Sbjct: 392 PDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 3/241 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCKA + A L + + K ++P +YN ++ + D+ + + ++
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKG-YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S+ + YT + ++ +V+ ++ + +I F K R+++
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + + + P ++TYNI+L+ L R ++ D F M + P ++YNTLL
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L ++LD + EM G PD +TY L R G + E+ L MK +
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 426
Query: 241 P 241
P
Sbjct: 427 P 427
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 69/203 (33%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV----------------VPDF------ 173
P T+N V D + GR+ + + M EAG V +F
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 174 -------------ISYNTLLNNLRKIRRLD--------------------------LC-- 192
I+Y+T++N L K+ R++ LC
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKT 127
Query: 193 ------LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
L EM GIKPD Y ++ + +EE+ LF M +Q+I P++ Y
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+LI+ L K +++ A +F+EM
Sbjct: 188 NTLINGLCKAWRIETAYELFKEM 210
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%)
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V+P ++NT+ + K RL+ ++ M E+G Y LI + GN +E+
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L + M+ ++ + Y ++I+ L K+ +V+ A + E+M
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM 106
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 137/271 (50%), Gaps = 5/271 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC + AV LL+S++D + P+ Y ++ + D+D + ++L ++ S
Sbjct: 101 MRALCADRRAAQAVGLLRSMQDCGVR-PDVVTYGTLIRGLCDAADVDTAVELLNEMCESG 159
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ + T + EE+ +++ +I + + +++KA
Sbjct: 160 IEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAA 219
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + +P+++TYN++++ + + G V + L+ +M E GV PD ++YNTL+ L
Sbjct: 220 RVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGL 279
Query: 184 RKIRRLDLCLIYFREM--GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ +D + EM GE+ ++PDL+T+ ++I + G + ++L++ M + R
Sbjct: 280 SSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRC 339
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ + LI L ++ KV AM + +EM SS
Sbjct: 340 NLVAFNLLIGGLLRVHKVKKAMELMDEMASS 370
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 6/269 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL--PNA--YNCVLVASAETNDIDLSFQILKD 58
N + LC+ G + AA+ LL+ + + PNA Y ++ A + +L+
Sbjct: 60 NTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRS 119
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ Y R D + + E+ + +++V + ++ + K+ +
Sbjct: 120 MQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGR 179
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
E +F+ + G +PD++ Y ++D L R G+V M E G+ P+ ++YN
Sbjct: 180 WESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNV 239
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N++ K + L + M E G++PD++TY LI ++E++ L +M Q +
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE 299
Query: 239 --IRPSIYVYRSLIDNLKKMGKVDLAMTI 265
+RP + + S+I L K+G + A+ +
Sbjct: 300 TRVRPDLMTFNSVIHGLCKIGWMRQALQV 328
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 16/281 (5%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNI--------FLPN-----AYNCVLVASAETNDIDL 51
Y+ L + G AA RL + LR + LP+ +YN VL A +D
Sbjct: 15 YLAVLLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDA 74
Query: 52 SFQILKDLLVSSRTLSSD---CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+ +L+ + R S YT RA Q + + + ++
Sbjct: 75 ALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGT 134
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + ++ A+ + + + +P+++ Y+ +L + GR + F M G
Sbjct: 135 LIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRG 194
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD + Y L+++L + ++ M E G++P+++TY LI+S + G++ E+L
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREAL 254
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L +M ++ ++P + Y +LI L + ++D AM + EEM
Sbjct: 255 DLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM 295
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 123/274 (44%), Gaps = 40/274 (14%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M I+ LC+ G V A R++ + ++ + PN YN ++ + + + + + K+
Sbjct: 201 MYTALIDSLCRHGKVKKAARVMDMMTERGLE-PNVVTYNVLINSMCKEGSVREALDLRKN 259
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ S + + D ++ N +I + +
Sbjct: 260 M--SEKGVQPD---------------------------------VVTYNTLITGLSSVLE 284
Query: 119 IEKALLIFDHI-KG-LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++A+ + + + +G + +PDL+T+N V+ L ++G + L A M E G + +++
Sbjct: 285 MDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAF 344
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L+ L ++ ++ + EM SG++PD TY+ LI+ F + +E + ++M+
Sbjct: 345 NLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRH 404
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Q + P Y L+ + G + A +F EM+
Sbjct: 405 QGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD 438
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/307 (17%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +CK G+V A+ L +++ +K + P+ YN ++ + ++D + +L++++
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGV-QPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296
Query: 61 VSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D T + Q L + + +++ N +I + +
Sbjct: 297 QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHK 356
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP------- 171
++KA+ + D + +PD TY+I+++ ++ +V + + M+ G+ P
Sbjct: 357 VKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIP 416
Query: 172 ---------------------------DFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
D +Y+T+++ K + + ++M + G+
Sbjct: 417 LLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGL 476
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD +TY+ I+ F ++G++ + R+ M P + V+ SLI G + +
Sbjct: 477 IPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILE 536
Query: 265 IFEEMNS 271
+ EM +
Sbjct: 537 LTREMTA 543
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGES---GIKPDLLTYTALIDSFGRTGNIEE 226
V D +SYNT+L L + LD L R M +P+ ++YT L+ + +
Sbjct: 53 VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ L M+ +RP + Y +LI L VD A+ + EM S
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCES 158
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 1/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ LC+AG V A L + L+D+ + Y+ VL + D+++ + + D++ +
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y++ A+ + L E ++ +++ ++ F+ I +A L
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFL 479
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
D ++ P+L TY ++++ L +V + ND+ FA M + G VPD + Y+ +++
Sbjct: 480 FLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFV 539
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K L + +M + G KP++ TYT+LI+ + E + LF M + + P
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRI 599
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+Y SLI K + A+ IF EM +
Sbjct: 600 LYTSLIACYCKRSNMKAALEIFREMET 626
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLL----VSSRTLSSDCYTNFARAFIMTDDCTQLL 88
PN Y+ ++ S T+ L + ++LL V ++ Y +
Sbjct: 209 PNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAW 268
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F++ + Q P + N +I F Q+ KA+ +FD +K PD+ +Y+I++D L
Sbjct: 269 NFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGL 328
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G V M G+ P+ +SY++LL+ L + R++L F+ + + G K D
Sbjct: 329 CKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDH 388
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ Y+ ++ + ++E L+NDM P Y Y SLI + ++ A+ +FE
Sbjct: 389 IVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFEL 448
Query: 269 M 269
M
Sbjct: 449 M 449
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 98/242 (40%), Gaps = 3/242 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C + G + A L +R + +PN Y ++ + N + + I D+
Sbjct: 461 CTILVHGFSNEGLIGEAFLFLDKVRQFGV-VPNLCTYRVIINGLCKVNKPNDVWGIFADM 519
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y+ F+ D + ++V + +I +I ++
Sbjct: 520 IKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKL 579
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ + +F H+ G PD I Y ++ + + L F M+ G+ D Y L
Sbjct: 580 PEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCL 639
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ K+ +D ++ EM G+ P ++TYT LI + + G+ ++++ ++N M Q I
Sbjct: 640 IGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGI 699
Query: 240 RP 241
P
Sbjct: 700 AP 701
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
IF + + + P++++ + II F K+ +++A ++ + KP++ TY +++ L
Sbjct: 515 IFADMIKRGYVPDTVLY-SIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGL 573
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
++ +++ F M G+ PD I Y +L+ K + L FREM G+ D
Sbjct: 574 CHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADS 633
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
YT LI F + ++ + +M + + P++ Y LI K+G AM ++
Sbjct: 634 FVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNS 693
Query: 269 M 269
M
Sbjct: 694 M 694
>gi|302143554|emb|CBI22115.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 97/171 (56%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+I N+++ AK+ ++E A F ++ CK D TYN ++ + G +
Sbjct: 161 SVIACNQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVY 220
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
SM+ AG + D +Y ++ +L K RLD F+EM E ++P L + +L+DS G+
Sbjct: 221 ESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKA 280
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G ++ S++++ +M+ +RPS +Y SLI++ K GK++ A+ I++EM +
Sbjct: 281 GRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKA 331
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 94/166 (56%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F KA +++ ++ C D TY +++ L + GR++ F MKE
Sbjct: 201 NSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKE 260
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P F+ + +L++++ K RLD + + EM G++P Y +LI+SF + G +E
Sbjct: 261 KNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLET 320
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+LR++++MK+ RP+ +Y ++++ K GK++ AM++F +M +
Sbjct: 321 ALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKA 366
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 91/164 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + AKS +++ A +F +K +P + + ++D +G+ GR++ + + M+ G
Sbjct: 238 MIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFG 297
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P Y +L+ + K +L+ L + EM ++G +P+ YT +++S ++G +E ++
Sbjct: 298 LRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAM 357
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+F+DM++ P+ Y L++ G+VD AM ++ M ++
Sbjct: 358 SVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNA 401
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 121/271 (44%), Gaps = 1/271 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
CN + L KA + A + ++D + A YN ++ +F++ + +
Sbjct: 165 CNQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESME 224
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L Y + + +E+ + S +V ++ + K+ +++
Sbjct: 225 AAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLD 284
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++ ++ ++G +P Y +++ + G++ L + MK+AG P++ Y ++
Sbjct: 285 TSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVV 344
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +L+ + F +M ++G P TY+ L++ +G ++ +++L+N M +R
Sbjct: 345 ESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLR 404
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y +L+ L VD+A + EM +
Sbjct: 405 PGLSTYTALLTLLANKKLVDVAAKVLLEMKA 435
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 121/265 (45%), Gaps = 6/265 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI---FLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
I L K+G + AA +L Q +++KN+ FL + ++ + + +D S ++ ++
Sbjct: 239 IPSLAKSGRLDAAFKLFQEMKEKNLRPSFL--VFASLVDSMGKAGRLDTSMKVYMEMQGF 296
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S+ Y + +F+ L +E+ + + + ++ + AKS ++E A
Sbjct: 297 GLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETA 356
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +F ++ P TY+ +L++ G+V+ + + SM AG+ P +Y LL
Sbjct: 357 MSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLSTYTALLTL 416
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + +D+ EM G D+ L+ + + G+++ +LR M IR +
Sbjct: 417 LANKKLVDVAAKVLLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLRFMGSSGIRTN 475
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFE 267
++ R L ++ K G + A + E
Sbjct: 476 NFIIRQLFESCMKNGLYESAKPLLE 500
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 128/259 (49%)
Query: 18 AVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARA 77
A L++ + + + AYN VLV+ + +D++ + ++ + + ++ YT+ +
Sbjct: 273 AFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQC 332
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
F + + + +++++Q ++ +I A K + IE+A + ++ C+P+
Sbjct: 333 FFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPN 392
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+ TYN ++ L V R + L M++ GV P+ +Y L + L K+RRLD F
Sbjct: 393 IYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFN 452
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
E G+KP+ +TY L++ + R + E++ + +M Q P Y +LI L +
Sbjct: 453 EALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGN 512
Query: 258 KVDLAMTIFEEMNSSLSDL 276
++ A+ + +EM + D+
Sbjct: 513 QLPDALRMHDEMENKGYDV 531
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 3/254 (1%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A++LL + N + P+ Y V+ A + I+ ++ +L+ + + + Y
Sbjct: 342 AMKLLDDMIQNN-YAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALI 400
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
+ + L + + Q P +I + K R++++A +F+ K
Sbjct: 401 QGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLK 460
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ +TYN +L+ R R+ + ++ M + PD ++Y TL+ L + +L L
Sbjct: 461 PNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRM 520
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
EM G + T L R GN +++ + MK + S Y I L
Sbjct: 521 HDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLST 580
Query: 256 MGKVDLAMTIFEEM 269
G+++ A + EM
Sbjct: 581 AGEMEEAQALLYEM 594
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 110/266 (41%), Gaps = 17/266 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A +LQ +R+ N PN YN ++ + + +++ L+
Sbjct: 365 ISALCKRKMIEQAYGVLQKMRE-NGCEPNIYTYNALIQGLCAVRRPEEALELVT--LMEQ 421
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-------IFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ + YT I+T +L +F E + + P + N ++ + +
Sbjct: 422 GGVPPNIYT----YTILTHGLCKLRRLDRAKEMFNEALARGLKPNRV-TYNTLLNGYCRG 476
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ +A+ I + C PD +TY ++ L + ++ D L M+ G +F +
Sbjct: 477 SRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTL 536
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L L ++ I++R M + G Y I G +EE+ L +M
Sbjct: 537 NILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMIN 596
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLA 262
+ P++ Y ++I + G++D A
Sbjct: 597 KGYSPNLTTYNTMIKGFCRQGRLDDA 622
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 100/266 (37%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N I+ LC A+ L+ +L ++ PN Y ++ + +D + ++ + L
Sbjct: 397 NALIQGLCAVRRPEEALELV-TLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEAL 455
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + + ++E+ Q + +I + Q+
Sbjct: 456 ARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLP 515
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + D ++ + T NI+ L RVG D + MK+ G Y +
Sbjct: 516 DALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAI 575
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L ++ EM G P+L TY +I F R G ++++ + N M + I
Sbjct: 576 HCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIG 635
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
P Y LI G+ A ++
Sbjct: 636 PDTGSYNILIKEFHNQGRTQDADQLY 661
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSI--YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + S+GR+G +ESL FN MK+ P + Y S++ +L K K+D+A +F +M
Sbjct: 256 SFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQM 314
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 1/201 (0%)
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK-SRQIEKALLIFDH 128
YT+ A+ + ++ +++ + ++I N I+ + K K + D
Sbjct: 222 AYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDS 281
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+K PDL TYN ++ R + F MK AG PD ++YN LL+ K RR
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ +EM SG P ++TY +LI ++ R G ++E++ L + M ++ I+P ++ Y +
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+ +K GK D AM +FEEM
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEM 422
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L K G S A LL LR+ + + AY ++ A A + + K L
Sbjct: 192 ISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGC 251
Query: 65 TLSSDCYTNFARAF-IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + M +++ ++ + + N +I + + E+A
Sbjct: 252 RPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAA 311
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K PD +TYN +LD+ G+ R + + M+ +G P ++YN+L++
Sbjct: 312 EVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAY 371
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ LD + +M + GIKPD+ TYT L+ F +TG + ++++F +M+ +P+I
Sbjct: 372 ARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNI 431
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI G M +FEE+
Sbjct: 432 CTFNALIKMHGNRGNFVEMMKVFEEI 457
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 128/273 (46%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K+ A+ +L+ + + + F P+ YN ++ A A +D + ++ ++
Sbjct: 330 NALLDVYGKSRRPREAMEVLKEM-EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMV 388
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
YT F T + EE+ +I N +I
Sbjct: 389 KKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFV 448
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ + +F+ IK +C PD++T+N +L + G+ G +++ F MK AG VP+ ++NTL+
Sbjct: 449 EMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 508
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + D + +R M ++G+ PDL TY A++ + R G E+S ++ +MK + +
Sbjct: 509 SAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCK 568
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
P+ Y SL+ +V+ + EE+ S +
Sbjct: 569 PNELTYCSLLHAYANGKEVERMSALAEEIYSGI 601
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E SP+ + N ++ + KSR+ +A+ + ++ P ++TYN ++
Sbjct: 313 VFEEMKAAGFSPDKV-TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAY 371
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G +++ + + M + G+ PD +Y TLL+ K + D + F EM +G +P++
Sbjct: 372 ARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNI 431
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
T+ ALI G GN E +++F ++K + P I + +L+ + G +F+E
Sbjct: 432 CTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 491
Query: 269 M 269
M
Sbjct: 492 M 492
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 10 CKAGNV-SAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C+ G++ A + + ++ F P+ YN +L ++ + ++LK++ S
Sbjct: 301 CRRGSLYEEAAEVFEEMKAAG-FSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAP 359
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + A+ + + ++V+ + ++ F K+ + + A+ +F
Sbjct: 360 SIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVF 419
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ ++ C+P++ T+N ++ + G G +M+ F +K VPD +++NTLL +
Sbjct: 420 EEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQN 479
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F+EM +G P+ T+ LI ++ R G ++++ ++ M + P + Y
Sbjct: 480 GMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTY 539
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+++ L + G + + + EM
Sbjct: 540 NAVLAALARGGLWEQSEKVLAEM 562
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 120/254 (47%), Gaps = 11/254 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I + G A+ + + + D + P+ YN VL A A + S ++L ++
Sbjct: 505 NTLISAYSRCGFFDQAMAIYRRMLDAGV-TPDLSTYNAVLAALARGGLWEQSEKVLAEMK 563
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ-IASPESIIVVNRIIFAFAKSRQI 119
+ Y + A+ + ++ EE+ I P+++++ ++ ++KS +
Sbjct: 564 DGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLL-KTLVLVYSKSDLL 622
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISY 176
+ F ++ PD+ T N ++ I GR V + N++LN +K++G P +Y
Sbjct: 623 TETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILN---FIKDSGFTPSLTTY 679
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L+ + + RE+ G+KPD++++ +I ++ R G ++E+ R+F +MK
Sbjct: 680 NSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKD 739
Query: 237 QQIRPSIYVYRSLI 250
+ P + Y + I
Sbjct: 740 FGLAPDVITYNTFI 753
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 14/190 (7%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+E Q SP+ I +N ++ + + R + K I + IK P L TYN ++ +
Sbjct: 629 FLELREQGFSPD-ITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYS 687
Query: 150 RVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
R + D+L E + G+ PD IS+NT++ + R+ F EM + G+ P
Sbjct: 688 RTEHFEKSEDILREIIA---KGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAP 744
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D++TY I S+ E++ + M + + +P+ Y SLID K+ + D
Sbjct: 745 DVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRD------ 798
Query: 267 EEMNSSLSDL 276
E NS +S+L
Sbjct: 799 -EANSFISNL 807
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 1/187 (0%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
+ F+ AS S VV II K + A + ++ D+ Y ++
Sbjct: 169 VFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLIT 228
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR-RLDLCLIYFREMGESGIK 205
GR + + F ++E G P I+YN +LN K+ M SG+
Sbjct: 229 AYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVA 288
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PDL TY LI S R EE+ +F +MK P Y +L+D K + AM +
Sbjct: 289 PDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEV 348
Query: 266 FEEMNSS 272
+EM +S
Sbjct: 349 LKEMEAS 355
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N +++ ++++ EK+ I I KPD+I++N V+ R GR+ + F
Sbjct: 675 SLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIF 734
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A MK+ G+ PD I+YNT + + + + M ++ KP+ TY +LID F +
Sbjct: 735 AEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKL 794
Query: 222 GNIEESLRLFNDMKQQQIRPSI 243
+E+ ++++ + PS+
Sbjct: 795 NRRDEANSFISNLR--NLDPSV 814
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N I A K +Q+ ++D ++ PD+ TYNI++ GRVG V+ F M++
Sbjct: 429 NMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMED 488
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
PD ++YN+++N L K LD + F++M E G PD+ TY+ LI+ FG++ ++
Sbjct: 489 GSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDM 548
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LF++M Q P+I Y L+D L++ GK A +E +
Sbjct: 549 ACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETL 591
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 150/349 (42%), Gaps = 79/349 (22%)
Query: 3 NGY-----IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSF 53
NGY ++ ++ V + + +R K +IF AYN +L A A+ +D ++
Sbjct: 182 NGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIF---AYNMLLNALAKAGMVDQAY 238
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
Q+ +D+ + + YT R T+ + +EE+V ++I N +I A
Sbjct: 239 QVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEAL 298
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLN----------- 159
K++ +++A+ + + C+P+ TY+I+LD+L G++ R+N++L+
Sbjct: 299 GKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVY 358
Query: 160 ---------------------------------EFASMKEA------------------- 167
F SM EA
Sbjct: 359 SYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPE 418
Query: 168 -GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ D YN + + L K++++ + M +G+ PD+ TY +I SFGR G +++
Sbjct: 419 KGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDK 478
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ LF +M+ +P + Y S+I+ L K G +D A +F++M D
Sbjct: 479 ASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYD 527
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N +I +F + ++KA +F+ ++ CKPD++TYN +++ LG+ G +++ F
Sbjct: 460 VFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFK 519
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+E G PD +Y+ L+ K ++D+ F EM G P+++TY L+D R G
Sbjct: 520 DMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRG 579
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
E+ + + +KQQ + P Y S+++ L+
Sbjct: 580 KTTEAHKFYETLKQQGLTPDSITY-SILERLE 610
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 103/216 (47%), Gaps = 13/216 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+E LC A + A+ LL + +K I YN + A + + L D + ++
Sbjct: 397 LEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSF-MSSLYDTMRANG 455
Query: 65 TLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D +T +F R ++ D ++L EE+ + ++ N +I K+
Sbjct: 456 VVP-DVFTYNIMISSFGRVGLV-DKASELF---EEMEDGSCKPDVVTYNSMINCLGKNGD 510
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A ++F ++ PD+ TY+I+++ G+ +V+ + F M G +P+ ++YN
Sbjct: 511 LDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNI 570
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
LL+ L + + ++ + + G+ PD +TY+ L
Sbjct: 571 LLDCLERRGKTTEAHKFYETLKQQGLTPDSITYSIL 606
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 131/266 (49%), Gaps = 1/266 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I C G RLL + D+N+ L YN ++ A + + + + ++ +
Sbjct: 260 IHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQ 319
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + + +D + + + + N +I + K+ +I++AL
Sbjct: 320 RPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALS 379
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ + K P+++TY+ ++D L + GR++ F+++ + G P+ I+YN +L+ L
Sbjct: 380 LFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALC 439
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
KI+ +D + F M E G+ P++ +Y LI+ + ++ I+E++ LF +M ++ + P
Sbjct: 440 KIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSV 499
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y LID L K G++ A +F M+
Sbjct: 500 TYNCLIDGLCKSGRISHAWELFNVMH 525
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I+ + +I KS +I A +F I P++ITYNI+LD L ++ V+ + F
Sbjct: 392 NIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELF 451
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E G+ P+ SYN L+N K +R+D + F EM + PD +TY LID ++
Sbjct: 452 NLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKS 511
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G I + LFN M + Y L D K+ V
Sbjct: 512 GRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 59/228 (25%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT--------------- 140
Q+ P ++++ N I+ K + +A ++ + G PD+ T
Sbjct: 212 QVVRP-NVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWR 270
Query: 141 --------------------YNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYN 177
YNI++D L G +G+ +DM N M E G PD +++N
Sbjct: 271 EVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRN---LMIERGQRPDLVTFN 327
Query: 178 TLL------NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
TL+ N++ + R+L F E GI PD+ +Y LI + + I+E+L LF
Sbjct: 328 TLMSGYCLYNDVVEARKL------FDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLF 381
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
N M +++ P+I Y SLID L K G++ A +F S++ D GP
Sbjct: 382 NKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELF----SAIHD-GGP 424
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I + I+ + ++ KAL D + D +TY +++ L ++G +
Sbjct: 149 ITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHK 208
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ V P+ + YN +++ L K + + ++ GI PD+ TYT LI F G
Sbjct: 209 MEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQ 268
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
E RL DM + + ++Y Y LID L K G + A
Sbjct: 269 WREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKA 307
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 83/193 (43%), Gaps = 3/193 (1%)
Query: 77 AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP 136
F DD L ++ + S++ N I+ + K + A+ + + P
Sbjct: 55 GFDAIDDAVALF---TRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITP 111
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
++T +I+++ +G + + + + G + I+ T++ L + L +
Sbjct: 112 SIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFH 171
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
+ G D +TY LI+ + G E+ L + M+ Q +RP++ +Y ++D L K
Sbjct: 172 DSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKD 231
Query: 257 GKVDLAMTIFEEM 269
G V A ++ ++
Sbjct: 232 GLVTEARDLYSDV 244
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 127/258 (49%), Gaps = 3/258 (1%)
Query: 14 NVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+ A+RL Q +++ PN YN +L + + ++L ++ + + + Y
Sbjct: 299 HCQEALRLFQEMKEAGC-CPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTY 357
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
A+ C + + ++ +I AF ++ + EKAL F ++
Sbjct: 358 NELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRK 417
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
C P+++TYNI++DI GR+ +++DM+ F M+E PD +++N+LL + L
Sbjct: 418 TNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTE 477
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
FREM +G P + T+ LI+ +GR G ++ S+ ++ + + ++P++ + +L+
Sbjct: 478 VSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMA 537
Query: 252 NLKKMGKVDLAMTIFEEM 269
+L + G+ + +EM
Sbjct: 538 SLAREGRWQQCEKVSQEM 555
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 1/157 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ I V N +I AK IE+A+ + + I+ + KPD +TYN ++ + GR G
Sbjct: 632 SPD-IKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAE 690
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ M+ AG P+ I+YNTLL + K R+D F +M + ++PD T+ L+ S+
Sbjct: 691 EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSY 750
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
G +E+L + M + +P+ +++L+D +
Sbjct: 751 SSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
FQ +KDL +S + Y A I C + L +E+ + + + N ++
Sbjct: 272 FQEMKDLEISPDDYT---YNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDV 328
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+ K ++A + ++ P+++TYN ++ R G ++ S+ G+ PD
Sbjct: 329 YGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPD 388
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+Y TL++ + R + L F EM ++ P+++TY LID +GR +++ +++F
Sbjct: 389 EFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 448
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M+++ P + + SL+ + G + +F EM
Sbjct: 449 FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREM 485
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-F 161
+ +I +++R+ ++ + +F+ ++ + + +TYN++LD+ G+ G D + F
Sbjct: 213 VYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLF 272
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK+ + PD +YNT++ + L F+EM E+G P+ +TY AL+D +G+
Sbjct: 273 QEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 332
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
G +E+ L +M+ I P+I Y LI + G D A +
Sbjct: 333 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAAL 376
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K G A LL + I PN YN ++ A A D + + K LL
Sbjct: 323 NALLDVYGKGGMHKEASELLVEMEAAGIS-PNIVTYNELIAAYARAGLCDEAAALKKSLL 381
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S+ L D Y AF + + L E+ + +I+ N +I + + +
Sbjct: 382 --SKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEK 439
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ + +F ++ C PDL+T+N +L G G + ++ N F MK AG +P ++N
Sbjct: 440 LDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNI 499
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + +D + ++ + +G++P + T+ AL+ S R G ++ ++ +M +
Sbjct: 500 LIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAG 559
Query: 239 IRPSIYVYRSLIDNLKKMGK 258
++ S + LI + G+
Sbjct: 560 LQLSDACHAGLIHSYANSGQ 579
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIA-SPESIIVVNRIIFA 112
++ +++ + LS C+ ++ + QL +I+E+ + A P S I+ + A
Sbjct: 550 KVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLA 609
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+ K +A L + + PD+ +N ++ + + G + + +++A + PD
Sbjct: 610 YCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPD 669
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++YN L++ + EM +G P+L+TY L+ S+ + G ++++ R+F
Sbjct: 670 GVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFG 729
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
DM ++RP + + +L+ + +G A+++ E M
Sbjct: 730 DMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMT 767
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP-DLITYNIVLDILGRVGRVNDMLNEFA 162
+ I+ Q+ AL +F+ +K + D+ Y ++ IL R R ++ + F
Sbjct: 178 VATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFE 237
Query: 163 SMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+M+ G + ++YN +L+ ++ D F+EM + I PD TY +I + +
Sbjct: 238 TMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQN 297
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +E+LRLF +MK+ P+ Y +L+D K G A + EM ++
Sbjct: 298 SHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAA 348
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+EE+ + + N ++ + + KA + ++ P+LITYN +L
Sbjct: 657 LLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYT 716
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ GR++D F M A V PD ++NTL+ + + L M E G +P +
Sbjct: 717 KHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQI 776
Query: 210 TYTALIDSFGRTGN 223
T+ AL+D + R +
Sbjct: 777 TFKALLDGYNRNAS 790
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 108/248 (43%), Gaps = 17/248 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I +AG A L +SL K + C L+++ + + + K L
Sbjct: 358 NELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISA-----FNRAERYEKALETF 412
Query: 63 SRTLSSDCYTNFARAFIMTD---------DCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
+ ++C N I+ D D ++ F++E + +P+ ++ N ++ +F
Sbjct: 413 TEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQE--KNCTPD-LVTWNSLLKSF 469
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ + +F +K P + T+NI+++ GR G V+ ++ + + G+ P
Sbjct: 470 GNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTV 529
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++ L+ +L + R C +EM E+G++ + LI S+ +G + + ++
Sbjct: 530 PTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDE 589
Query: 234 MKQQQIRP 241
+++ +P
Sbjct: 590 LEKSAKQP 597
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 141/282 (50%), Gaps = 25/282 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +CK G + A++ L ++ PN +N +L + T + ++L D+L
Sbjct: 121 NVLINGICKEGRLDEAIKFLNNMPSYGC-QPNVITHNIILRSMCSTGRWMDAEKLLSDML 179
Query: 61 ---VSSRTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFA 112
S ++ + NF C Q L+ +E++ + + N ++
Sbjct: 180 RKGCSPSVVTFNILINFL--------CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 231
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGV 169
F K +++++A+ D + C PD++TYN +L L + G+V+ ++LN+ +S G
Sbjct: 232 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS---KGC 288
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P I+YNT+++ L K+ + + + EM G+KPD++TY++L+ R G ++E+++
Sbjct: 289 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 348
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
F+D++ IRP+ Y S++ L K + D A+ M S
Sbjct: 349 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS 390
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
Y++ CK V A++LL +R+K P+ YN ++ + +D + + L ++
Sbjct: 88 YVQTTCKESGVGQAMKLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 146
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + R+ T + ++++ S++ N +I + + +A
Sbjct: 147 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 206
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ I + + C P+ ++YN +L + +++ + M G PD ++YNTLL
Sbjct: 207 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 266
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K ++D+ + ++ G P L+TY +ID + G E +++L ++M+++ ++P
Sbjct: 267 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 326
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y SL+ L + GKVD A+ F ++
Sbjct: 327 IITYSSLVSGLSREGKVDEAIKFFHDLEG 355
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 40/240 (16%)
Query: 70 CYTNFARAFIMTDDCT-----QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
C++ +F + C Q + ++E+ S ++ N +I K ++++A+
Sbjct: 79 CFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 138
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGR-------VNDMLNEFAS-------------- 163
+++ C+P++IT+NI+L + GR ++DML + S
Sbjct: 139 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 198
Query: 164 --------------MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
M G P+ +SYN LL+ K +++D + Y M G PD++
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 258
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY L+ + + G ++ ++ + N + + P + Y ++ID L K+GK + A+ + +EM
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 318
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 107/220 (48%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ IL+ + + T +S Y F + + +++ +V I+ N ++
Sbjct: 206 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 265
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A K +++ A+ I + + C P LITYN V+D L +VG+ + M+ G+ P
Sbjct: 266 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 325
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y++L++ L + ++D + +F ++ GI+P+ +TY +++ ++ + ++
Sbjct: 326 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 385
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ +P+ Y LI+ + G A+ + E+ S
Sbjct: 386 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 425
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G V AV +L L K + YN V+ ++ + + ++L ++
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM-- 318
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ L D Y++ + + F ++ + + I N I+ KSRQ
Sbjct: 319 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 378
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFAS 163
++A+ ++ +CKP TY I+++ + G D+LNE S
Sbjct: 379 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 425
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 130/271 (47%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN SAA+RLL+S+ N P+ Y ++ + + + +F + ++
Sbjct: 168 INGLCKVGNTSAAIRLLRSMEQGNC-QPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV--G 224
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ +S D YT+ A + + + ++V +++ + ++ A K ++ +
Sbjct: 225 QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 284
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A I D + +PD++TY ++D +++ + F M G PD ISY TL+N
Sbjct: 285 AHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLIN 344
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
KI ++D + F EM PD TY L+ G +++++ LF++M + P
Sbjct: 345 GYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMP 404
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ Y L+D+L K ++ AM + + + +S
Sbjct: 405 DLVTYSILLDSLCKNCHLEEAMALLKAIEAS 435
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC LL + + I LP+ ++ V+ A + + + +I+ D+++
Sbjct: 238 VHALCNLCEWKHVTTLLNQMVNSKI-LPDVVIFSTVVDALCKEGKVTEAHEIV-DMMIQ- 294
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R + D YT + + + + + +V+ +I +I + K +I+K
Sbjct: 295 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 354
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ +F+ + + PD TYN ++ L VGR+ D + F M G +PD ++Y+ LL+
Sbjct: 355 AMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 414
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L K L+ + + + S + PD+ Y +ID R G +E + LF+++ + + P
Sbjct: 415 SLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 474
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
S++ Y +I L K G ++ A +F EM+ +
Sbjct: 475 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGN 505
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P ++ +N +I +F ++ A + I L +PD T+ ++ L G++ + L+
Sbjct: 88 PPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALH 147
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M + G P+ ++Y TL+N L K+ + R M + +PD++ YT++IDS
Sbjct: 148 LFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC 207
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + E+ LF+ M Q I P I+ Y SL+ L + + T+ +M +S
Sbjct: 208 KDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 260
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
Query: 33 PNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN Y N ++ + N + +F +L +L +T R + + L
Sbjct: 89 PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 148
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ +++ +I K A+ + ++ C+PD++ Y ++D L +
Sbjct: 149 FDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK 208
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V + N F+ M G+ PD +Y +L++ L + +M S I PD++
Sbjct: 209 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 268
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ ++D+ + G + E+ + + M Q+ + P + Y +L+D ++D A+ +F+ M
Sbjct: 269 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 327
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ + P SI+ +++ + AK + L + + P++ T NI+++ + R
Sbjct: 47 LLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNR 106
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V + A + + G PD ++ TL+ L ++ L F +M + G +P+++TY
Sbjct: 107 VGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGT 166
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ + GN ++RL M+Q +P + +Y S+ID+L K +V A +F +M
Sbjct: 167 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM 222
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V+ A ++ + + + P+ Y ++ +++D + ++ D++V
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGV-EPDVVTYTTLMDGHCLQSEMDEAVKVF-DMMVR- 329
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + D YT + + + EE+ + N ++ +++
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQD 389
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ +F + PDL+TY+I+LD L + + + + +++ + + PD YN +++
Sbjct: 390 AIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIID 449
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + L+ F + G+ P + TY +I + G + E+ +LF +M P
Sbjct: 450 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 509
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ + + A+ + EEM
Sbjct: 510 DGCTYNTIARGFLQNNETLRAIQLLEEM 537
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/250 (18%), Positives = 101/250 (40%), Gaps = 3/250 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
C + AV++ + K F P+ +Y ++ + + ID + + +++
Sbjct: 312 CLQSEMDEAVKVFDMMVRKG-FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 370
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ Y + E+V ++ + ++ + K+ +E+A+ +
Sbjct: 371 TKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLK 430
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
I+ PD+ YNI++D + R G + + F+++ G+ P +YN +++ L K
Sbjct: 431 AIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRG 490
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
L+ F EM + PD TY + F + +++L +M + +
Sbjct: 491 LLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTT 550
Query: 248 SLIDNLKKMG 257
L++ L G
Sbjct: 551 LLVEMLSDDG 560
>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
Length = 506
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 137/311 (44%), Gaps = 46/311 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA----YN---CVLVASAETNDIDLSFQI 55
NG + LCKAGNV A+ + KN F A Y+ L A+ ND+ ++I
Sbjct: 115 NGCLRGLCKAGNVDGALEFFREA--KNSFSLRASVSTYSILVAALTAAKRNNDV---YEI 169
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE----------------------- 92
L+++ D Y+ + + + + +E
Sbjct: 170 LREMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSK 229
Query: 93 -----EVVQIASPE------SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
E V+IA S++ N ++ F K+R++++ + +F + PD+ TY
Sbjct: 230 TGRVDEAVEIAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTY 289
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
NI+ + L R G M + GV+PD +++N+L+N L + R + +EM
Sbjct: 290 NILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVS 349
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G P+ +TYT L+ R +E + LF + +++ P++Y Y +++ L K G++D
Sbjct: 350 RGCDPNAITYTILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQ 409
Query: 262 AMTIFEEMNSS 272
A +F M +S
Sbjct: 410 AHRLFGVMLAS 420
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 127/301 (42%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL---- 59
I LCK+G V A L++ + +N +P+A Y+ V+ ++T +D + +I K+
Sbjct: 189 IHSLCKSGMVDKAKVLVERMISRNC-VPDARIYDPVIEELSKTGRVDEAVEIAKEADAKH 247
Query: 60 -------------LVSSRTLSSD--CYTNFARAFIMTDDCTQLLIF-------------- 90
+ +R L +T AR D T ++F
Sbjct: 248 CTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYK 307
Query: 91 -IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ + Q + N +I + + +A+ + + C P+ ITY I+L L
Sbjct: 308 LLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLA 367
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG-IKPDL 208
R R ++ + F + + + P+ +YNT+++ L K RLD F M S P+
Sbjct: 368 RNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNA 427
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY ALI +E ++ L + M ++ P + Y +++ K G++D A + E
Sbjct: 428 ITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAFCKQGRIDEAFELLER 487
Query: 269 M 269
M
Sbjct: 488 M 488
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 112/271 (41%), Gaps = 5/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LCKAG + A RL + + PNA Y ++ +++ + +L +
Sbjct: 8 NTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVLLLDAVY 67
Query: 61 VSSRTLSSDCYTNFA-RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
L Y +A + + ++++ + S SI +N + K+ +
Sbjct: 68 FKLSWLVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNV 127
Query: 120 EKALLIFDHIK-GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ AL F K + + TY+I++ L R ND+ M+ G+ D +Y+
Sbjct: 128 DGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEADKDTYSL 187
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++++L K +D + M PD Y +I+ +TG ++E++ + + +
Sbjct: 188 IIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEADAKH 247
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S+ Y SL+ K ++ + +F M
Sbjct: 248 C-TSVVTYNSLVLGFLKARRLKRGIKVFTRM 277
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 20/150 (13%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFISYNTLLNNL-------RKIR 187
P++ TYN V+ L + GR++ F M + P+ I+Y L++ L R +
Sbjct: 2 PNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVL 61
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSF---GRTGNIEESLRLFNDMKQQQIRPSIY 244
LD +YF+ L+ T LI F GN+ ++ L DM + SI
Sbjct: 62 LLDA--VYFKLSW-------LVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQ 112
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ L K G VD A+ F E +S S
Sbjct: 113 DLNGCLRGLCKAGNVDGALEFFREAKNSFS 142
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 40/182 (21%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L + V L Q L D+ + PN YN V+ A + +D + ++ +L S
Sbjct: 363 LKWLARNARADECVELFQRLLDRKL-APNVYTYNTVMSALCKAGRLDQAHRLFGVMLAS- 420
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
DCT P + I +I ++E+A+
Sbjct: 421 -------------------DCT--------------PPNAITYRALIHGLCLKMELERAV 447
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L+ D + C PD+ Y ++ + GR+++ M AG D + + TL+ L
Sbjct: 448 LLLDAMAKRDCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAG---DKVMFRTLVRAL 504
Query: 184 RK 185
K
Sbjct: 505 CK 506
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 133/271 (49%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C+ G VS A L+ + K + P YN ++ + + + ++L ++L
Sbjct: 263 NTLVNAYCRRGLVSEAFGLVDCMAGKGL-KPGLFTYNALINGLCKEGSYERAKRVLDEML 321
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ + +D + E++Q +I + I+ F+++ ++
Sbjct: 322 GVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELG 381
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL F+ +KG+ PD + Y I+++ R V+ L M E G V D ++YNTLL
Sbjct: 382 RALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLL 441
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L + + LD F+EM E G+ PD T T LI + + GN+ ++L LF M + ++
Sbjct: 442 NGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLK 501
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y +L+D K+G+++ A ++ +M S
Sbjct: 502 PDVVTYNTLMDGFCKVGEMEKAKELWYDMIS 532
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G+ A R+L + + PNA +N +LV S D+ + ++ ++L
Sbjct: 298 NALINGLCKEGSYERAKRVLDEMLGVGL-CPNAATFNPMLVESCRKEDVWEAERVFNEML 356
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+++ F + + L + E++ + ++ +I + ++ +
Sbjct: 357 QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVS 416
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + + C D++TYN +L+ L R ++D F M E GV PDF + TL+
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLI 476
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + L F M +KPD++TY L+D F + G +E++ L+ DM ++I
Sbjct: 477 HGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIF 536
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
PS + LI+ +G V A +++EM
Sbjct: 537 PSYISFSILINGFCSLGLVSEAFRLWDEM 565
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N + LC+ + A L + + ++ +F P+ Y + D +++ + ++
Sbjct: 438 NTLLNGLCRGKMLDDADELFKEMVERGVF-PDFYTLTTLIHGYCKDGNMTKALSLFETMT 496
Query: 63 SRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R+L D Y F + + +++ S I + +I F +
Sbjct: 497 LRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVS 556
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFISYN 177
+A ++D +K KP L+T N ++ R G + ND LN +M GV PD I+YN
Sbjct: 557 EAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLN---TMISEGVPPDCITYN 613
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL+N+ K D M E G+ P+L+TY A++ F R G ++E+ + + M +
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P Y SLI+ + A + +EM
Sbjct: 674 GINPDKSTYTSLINGYVSKDNMKEAFRVHDEM 705
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 122/271 (45%), Gaps = 35/271 (12%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
NA N +L A + +DL++++ +D + S ++ A + +++ E
Sbjct: 190 NACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSE 249
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG- 152
+ + ++ N ++ A+ + + +A + D + G KP L TYN +++ L + G
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS 309
Query: 153 -----RV----------------NDMLNE-------------FASMKEAGVVPDFISYNT 178
RV N ML E F M + GVVPD IS+++
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ + L L YF +M G+ PD + YT LI+ + R ++ +L++ N+M ++
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +L++ L + +D A +F+EM
Sbjct: 430 CVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 114/238 (47%), Gaps = 3/238 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK GN++ A+ L +++ +++ P+ YN ++ + +++ + ++ D++
Sbjct: 476 IHGYCKDGNMTKALSLFETMTLRSL-KPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 534
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S ++ F ++ +E+ + +++ N II + ++ + KA
Sbjct: 535 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 594
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD ITYN +++ + + +M+E G++P+ ++YN +L
Sbjct: 595 DFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGF 654
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ R+ + +M + GI PD TYT+LI+ + N++E+ R+ ++M Q+ P
Sbjct: 655 SRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 87/167 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V + +I + ++R++ + F ++ + N +L + +VG V+ +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++G + + + N ++N L K +LD +Y EM E G+ DL+TY L++++ R G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E+ L + M + ++P ++ Y +LI+ L K G + A + +EM
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM 320
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 139/273 (50%), Gaps = 7/273 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M N I LCK VS A +L + K I P+ +N +++ + +F + +
Sbjct: 201 MYNIIINSLCKDKAVSDAYQLYSEMITKRIS-PDVVTFNSLILGFCVVGQLKEAFGLFHE 259
Query: 59 LLVSSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+++ + ++ D YT A + T+ + +++ ++ + ++ +
Sbjct: 260 MVL--KNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ KA +F + L P +YNI+++ LG++ V++ L+ F M G+ PD ++Y
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L++ L K+ R+ EM +GI D+LTY +LID + +I++++ L +K
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKD 437
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Q I+PS+Y Y LID L K G++ A +F+++
Sbjct: 438 QGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDL 470
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 126/267 (47%), Gaps = 34/267 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LCK G AA+++L+ + K + N + + I+ + L +
Sbjct: 171 INGLCKIGETRAALQMLKKIEGKLV----------------NTDVVMYNIIINSLCKDKA 214
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+S D QL + E + + SP+ ++ N +I F Q+++A +
Sbjct: 215 VS---------------DAYQL--YSEMITKRISPD-VVTFNSLILGFCVVGQLKEAFGL 256
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F + PD+ T++I++D L + G + N A M + GV+PD ++Y++L++
Sbjct: 257 FHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCL 316
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ ++ F M G+ P +Y +I+ G+ ++E+L LF +M + I P
Sbjct: 317 VNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVT 376
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y SLID L K+G++ A + +EM+++
Sbjct: 377 YNSLIDGLCKLGRISYAWQLVDEMHNN 403
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 124/275 (45%), Gaps = 9/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLL 60
N I C G + A L + KNI P+ Y ++ A D I + +L ++
Sbjct: 238 NSLILGFCVVGQLKEAFGLFHEMVLKNIN-PDVYTFSILVDALCKDGNITRAKNMLAVMM 296
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y++ + + ++ + + ++ N +I K + ++
Sbjct: 297 KQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVD 356
Query: 121 KALLIFDHIKGLKCK---PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+AL +F K + CK PD +TYN ++D L ++GR++ M G+ D ++YN
Sbjct: 357 EALSLF---KEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYN 413
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ L K +D + +++ + GI+P + TY LID + G ++ + +F D+ +
Sbjct: 414 SLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIK 473
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + Y +I+ L K G + A + +M ++
Sbjct: 474 GYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENN 508
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 117/272 (43%), Gaps = 5/272 (1%)
Query: 3 NGYIEKLCKAGN--VSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
N + + KA N + A+ L L K I P +N ++ ++ +F I
Sbjct: 61 NKILGSIVKANNNHYTTAISLSHQLELKGI-TPTIVTFNILVNCYCHLGEMTFAFSIFAK 119
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L ++ + + + L F + V+ + + +I K +
Sbjct: 120 ILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGE 179
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
AL + I+G D++ YNI+++ L + V+D ++ M + PD +++N+
Sbjct: 180 TRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNS 239
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + +L F EM I PD+ T++ L+D+ + GNI + + M +Q
Sbjct: 240 LILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQG 299
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ P + Y SL+D + +V+ A +F M+
Sbjct: 300 VIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 121/269 (44%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS---FQILKDLL 60
++ LCK GN++ A +L + + + +P+ Y+ ++ N+++ + F + L
Sbjct: 276 VDALCKDGNITRAKNMLAVMMKQGV-IPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V+ S + N M D+ L F E + +P+++ N +I K +I
Sbjct: 335 VAPHAHSYNIMINGLGKIKMVDEALSL--FKEMCCKGIAPDTV-TYNSLIDGLCKLGRIS 391
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + D + D++TYN ++D+L + ++ + +K+ G+ P +YN L+
Sbjct: 392 YAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILI 451
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K RL F+++ G + TY +I+ + G E+ L + M+ I
Sbjct: 452 DGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGII 511
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y ++I L + + + A + EM
Sbjct: 512 PDAVTYETIIRALFRKDENEKAEKLLREM 540
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS-------MKEAGVVPDFISYNT 178
F + ++ P ++ +N ILG + + N+ N + + ++ G+ P +++N
Sbjct: 45 FHRMLRMRPTPSIVEFN---KILGSIVKANN--NHYTTAISLSHQLELKGITPTIVTFNI 99
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N + + F ++ + G P +T+ LI+ G ++E+L + +
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
YR+LI+ L K+G+ A+ + +++ L
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL 194
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 1/201 (0%)
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK-SRQIEKALLIFDH 128
YT+ A+ + ++ +++ + ++I N I+ + K K + D
Sbjct: 222 AYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDS 281
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+K PDL TYN ++ R + F MK AG PD ++YN LL+ K RR
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ +EM SG P ++TY +LI ++ R G ++E++ L + M ++ I+P ++ Y +
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+ +K GK D AM +FEEM
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEM 422
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L K G S A LL LR+ + + AY ++ A A + + K L
Sbjct: 192 ISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGC 251
Query: 65 TLSSDCYTNFARAF-IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + M +++ ++ + + N +I + + E+A
Sbjct: 252 RPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAA 311
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K PD +TYN +LD+ G+ R + + M+ +G P ++YN+L++
Sbjct: 312 EVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAY 371
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ LD + +M + GIKPD+ TYT L+ F +TG + ++++F +M+ +P+I
Sbjct: 372 ARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNI 431
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI G M +FEE+
Sbjct: 432 CTFNALIKMHGNRGNFVEMMKVFEEI 457
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 128/273 (46%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K+ A+ +L+ + + + F P+ YN ++ A A +D + ++ ++
Sbjct: 330 NALLDVYGKSRRPREAMEVLKEM-EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMV 388
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
YT F T + EE+ +I N +I
Sbjct: 389 KKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFV 448
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ + +F+ IK +C PD++T+N +L + G+ G +++ F MK AG VP+ ++NTL+
Sbjct: 449 EMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 508
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + D + +R M ++G+ PDL TY A++ + R G E+S ++ +MK + +
Sbjct: 509 SAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCK 568
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
P+ Y SL+ +V+ + EE+ S +
Sbjct: 569 PNELTYCSLLHAYANGKEVERMSALAEEIYSGI 601
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E SP+ + N ++ + KSR+ +A+ + ++ P ++TYN ++
Sbjct: 313 VFEEMKAAGFSPDKV-TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAY 371
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G +++ + + M + G+ PD +Y TLL+ K + D + F EM +G +P++
Sbjct: 372 ARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNI 431
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
T+ ALI G GN E +++F ++K + P I + +L+ + G +F+E
Sbjct: 432 CTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 491
Query: 269 M 269
M
Sbjct: 492 M 492
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 10 CKAGNV-SAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C+ G++ A + + ++ F P+ YN +L ++ + ++LK++ S
Sbjct: 301 CRRGSLYEEAAEVFEEMKAAG-FSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAP 359
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + A+ + + ++V+ + ++ F K+ + + A+ +F
Sbjct: 360 SIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVF 419
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ ++ C+P++ T+N ++ + G G +M+ F +K VPD +++NTLL +
Sbjct: 420 EEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQN 479
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F+EM +G P+ T+ LI ++ R G ++++ ++ M + P + Y
Sbjct: 480 GMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTY 539
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+++ L + G + + + EM
Sbjct: 540 NAVLAALARGGLWEQSEKVLAEM 562
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 120/254 (47%), Gaps = 11/254 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I + G A+ + + + D + P+ YN VL A A + S ++L ++
Sbjct: 505 NTLISAYSRCGFFDQAMAIYRRMLDAGV-TPDLSTYNAVLAALARGGLWEQSEKVLAEMK 563
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ-IASPESIIVVNRIIFAFAKSRQI 119
+ Y + A+ + ++ EE+ I P+++++ ++ ++KS +
Sbjct: 564 DGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLL-KTLVLVYSKSDLL 622
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISY 176
+ F ++ PD+ T N ++ I GR V + N++LN +K++G P +Y
Sbjct: 623 TETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILN---FIKDSGFTPSLTTY 679
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L+ + + RE+ G+KPD++++ +I ++ R G ++E+ R+F +MK
Sbjct: 680 NSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKD 739
Query: 237 QQIRPSIYVYRSLI 250
+ P + Y + I
Sbjct: 740 FGLAPDVITYNTFI 753
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+E Q SP+ I +N ++ + + R + K I + IK P L TYN ++ +
Sbjct: 629 FLELREQGFSPD-ITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYS 687
Query: 150 RVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
R + D+L E + G+ PD IS+NT++ + R+ F EM + G+ P
Sbjct: 688 RTEHFEKSEDILREIIA---KGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAP 744
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
D++TY I S+ E++ + M + +P+ Y SLID K+ + D A
Sbjct: 745 DVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEA 800
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 1/187 (0%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
+ F+ AS S VV II K + A + ++ D+ Y ++
Sbjct: 169 VFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLIT 228
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR-RLDLCLIYFREMGESGIK 205
GR + + F ++E G P I+YN +LN K+ M SG+
Sbjct: 229 AYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVA 288
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PDL TY LI S R EE+ +F +MK P Y +L+D K + AM +
Sbjct: 289 PDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEV 348
Query: 266 FEEMNSS 272
+EM +S
Sbjct: 349 LKEMEAS 355
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 129/270 (47%), Gaps = 11/270 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G V ++LL + + + F P+ YN ++ + N +D + ++ K L
Sbjct: 268 NSLMDGYCKLGRVDDGLKLLLQMVECDNF-PDIQTYNILVAGFSRANRLDDALELFKLLS 326
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT + + F +E + + I +I A S++I+
Sbjct: 327 SYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDV------ISYTTVIKGLADSKRID 380
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ +K C P+++ Y V+D L + GR+ D L F M + VP +Y ++
Sbjct: 381 EACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVI 440
Query: 181 NNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L K + L D C + F +M + G PD +TYT LID F + ++E+ +L + M +
Sbjct: 441 DGLCKAQMLPDACKV-FEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 499
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y S++ K+ ++ A + +M
Sbjct: 500 EPTAVTYGSIVHGFCKLDMINEAKEVIAQM 529
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKA + A ++ + + K +P+ Y ++ ++ + +D + ++L +L
Sbjct: 440 IDGLCKAQMLPDACKVFEQMVQKGC-VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 498
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + F D + I ++ + + + ++ + + E+A
Sbjct: 499 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 558
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PD+I Y ++D+L GRV + + F SM E G PD ++Y T++ N
Sbjct: 559 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 618
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
KI ++ M +SG+ PD Y +L+D + + ++++ +++ M I+P+
Sbjct: 619 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 678
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L+ L K GK D A ++F+EM
Sbjct: 679 VTFNVLMHGLFKDGKTDRAFSLFKEM 704
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ E + +P+ I+ + I F+ R + +A +FD + C PD +TY ++
Sbjct: 560 VLTEMTARGCAPDVILYTSLIDLLFSTGR-VPEARHVFDSMIEKGCAPDALTYGTIIQNF 618
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
++G V M ++GV PD +YN+L++ K+ R+D + M SGIKP+
Sbjct: 619 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 678
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+T+ L+ + G + + LF +M ++ ++ P++ Y LID L K G+V A + F+
Sbjct: 679 VTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQ 738
Query: 268 EM 269
EM
Sbjct: 739 EM 740
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 126/270 (46%), Gaps = 4/270 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN + LCKA + A+ L + P +YN V+ A + +D +++ +
Sbjct: 23 CNIVLNGLCKARKIDKAIELFLEMPSMGC-EPTIVSYNTVISGLASIDKMDEAYKFFNSM 81
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + +T F + + + ++ P+ + + +I + K+ +
Sbjct: 82 IDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPD-VFLYTSVIHGYCKAGDL 140
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ I + + C PD Y +++D L ++GRV++ F M+++G + D++++ TL
Sbjct: 141 DTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTL 200
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L +LD +REM E G +P L +LI + + G ++E+ ++ + +++
Sbjct: 201 IEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKV 260
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S Y SL+D K+G+VD + + +M
Sbjct: 261 ATSRVAYNSLMDGYCKLGRVDDGLKLLLQM 290
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ + K ++++A ++D + KP+ +T+N+++ L + G+ + + F M E
Sbjct: 647 NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 706
Query: 167 AG-VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
V P +SY L++ L K R+ F+EM + GI P+ TYT+LI S + G I
Sbjct: 707 KDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIP 766
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+ +L DM + + P + Y +LI L VD A +F+EM
Sbjct: 767 EAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 810
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 125/271 (46%), Gaps = 12/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKN----IFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
+ CK ++ A ++ +R++ +F+ + +L + ++Q+L ++
Sbjct: 510 VHGFCKLDMINEAKEVIAQMRERGCEPGLFI---FTSLLSYYLSKGRAEEAYQVLTEM-- 564
Query: 62 SSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++R + D YT+ T + + +++ + II F+K +
Sbjct: 565 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 624
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E A I + + PD YN ++D ++ RV+ + M +G+ P+ +++N L
Sbjct: 625 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 684
Query: 180 LNNLRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L K + D F+EM E + P L++YT LID G+ G + E+ F +M +
Sbjct: 685 MHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRG 744
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P + Y SLI +L K G++ A + E+M
Sbjct: 745 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 775
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 136/340 (40%), Gaps = 82/340 (24%)
Query: 6 IEKLCKAGNVSAAVRLL-QSLRD--KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
I CKAG LL Q+L+ ++FL Y V+ + D+D F+IL+++L +
Sbjct: 97 IHGFCKAGQPQVGHMLLNQALKRFRPDVFL---YTSVIHGYCKAGDLDTGFKILEEMLAA 153
Query: 63 SRTLSSDCYTNFARAFIMTD-------------------------DCTQLLIFIE----- 92
C + A F++ D D + IE
Sbjct: 154 G------CIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNH 207
Query: 93 -----------EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
E+++ + V + +IFA K+ ++++A I+ + K + Y
Sbjct: 208 GKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAY 267
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N ++D ++GRV+D L M E PD +YN L+ + RLD L F+ +
Sbjct: 268 NSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSS 327
Query: 202 SGIKP-----------------------------DLLTYTALIDSFGRTGNIEESLRLFN 232
G KP D+++YT +I + I+E+ LF
Sbjct: 328 YGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFE 387
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+K P++ Y ++ID L K G+++ + FE+M+ S
Sbjct: 388 KLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGS 427
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 91/170 (53%), Gaps = 1/170 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ K+R+I+KA+ +F + + C+P +++YN V+ L + ++++ F
Sbjct: 20 VVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFN 79
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
SM + G PD I++ TL++ K + + + + + +PD+ YT++I + + G
Sbjct: 80 SMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAG 138
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+++ ++ +M P Y LID L K+G+VD A +FE M S
Sbjct: 139 DLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKS 188
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV-NRIIFAFAKSRQIEKALLIFDHIKG 131
F++A M D+ +LL +V+ PE V I+ F K I +A + ++
Sbjct: 477 GFSKASKM-DEARKLL----DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 531
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
C+P L + +L GR + M G PD I Y +L++ L R+
Sbjct: 532 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 591
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
F M E G PD LTY +I +F + GN+E + + M + + P + Y SL+D
Sbjct: 592 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 651
Query: 252 NLKKMGKVDLAMTIFEEMNSS 272
K+ +VD A +++ M +S
Sbjct: 652 GYVKLERVDQAFGVYDRMVAS 672
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
H GL PD++ NIVL+ L + +++ + F M G P +SYNT+++ L I
Sbjct: 12 HTTGLM--PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASID 69
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
++D +F M ++G +PD++ +T LI F + G + L N ++ RP +++Y
Sbjct: 70 KMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKRFRPDVFLYT 128
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
S+I K G +D I EEM
Sbjct: 129 SVIHGYCKAGDLDTGFKILEEM 150
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 126/259 (48%), Gaps = 8/259 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L G V A + S+ +K P+A Y ++ ++ +++ + +IL+ L++
Sbjct: 580 IDLLFSTGRVPEARHVFDSMIEKGC-APDALTYGTIIQNFSKIGNVEAAGEILE--LMAK 636
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ DC Y + ++ + Q + +V + + N ++ K + ++
Sbjct: 637 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 696
Query: 122 ALLIF-DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + ++ + P L++Y I++D LG+ GRV++ ++F M + G++P+ +Y +L+
Sbjct: 697 AFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI 756
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+L K R+ +M + G+ PD+ Y+ALI + ++ + +F +M ++
Sbjct: 757 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 816
Query: 241 PSIYVYRSLIDNLKKMGKV 259
P+ Y+ L + G+
Sbjct: 817 PNEVTYKVLRRGFRAAGRA 835
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ + L+ M G++PD ++ N +LN L K R++D + F EM G +P +++Y
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+I ++E+ + FN M P + + +LI K G+
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ 105
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+EM +G+ PD++ +++ + I++++ LF +M P+I Y ++I L
Sbjct: 8 LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67
Query: 256 MGKVDLAMTIFEEM 269
+ K+D A F M
Sbjct: 68 IDKMDEAYKFFNSM 81
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 127/271 (46%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ +CK G + A++LL + D + PN +Y+C++ + + +++L+F + +
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVD-PNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + +T + M + L + ++Q +++ N +I + +E
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + D ++ C P++ TY+I++D + G + + M G P+ ++Y ++
Sbjct: 367 EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMV 426
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K D +M G P+ +T+ I G +E +++L M+
Sbjct: 427 DVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCL 486
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+I Y L+D L +M K + A +F+E+ +
Sbjct: 487 PNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II + + E+AL +F I CKP + YN +LD L + + + +MK+ G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
++P+ +YN LL L K R+D F EM G PD +TYT ++ S + G I+++
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L + +PS+ VY +LID + K G++++A+ + EM
Sbjct: 235 EL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEM 270
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 7/258 (2%)
Query: 14 NVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
N+S+ + ++ + N F A Y ++ ++D+ IL+ + + D +
Sbjct: 53 NLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
+ Q L + + ++ + N ++ A + + ++ ++K
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
P++ TYNI+L L + RV+ F M G PD ++Y T++++L K ++D
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
RE+ KP + Y ALID + G IE +++L +M + P++ Y +I+
Sbjct: 233 A----RELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Query: 252 NLKKMGKVDLAMTIFEEM 269
+L G V+LA +F +M
Sbjct: 288 SLCVSGNVELAFALFAQM 305
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 8/263 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K+G++ A + PN Y C++ + + D + +++ + +
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGC-RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T ++ + F + + +E + +I N ++ A + + E+A
Sbjct: 450 CTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F I+ +P+L+TYN VL R G + + L F G PD I+YNT+++
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569
Query: 184 RKIRRLDLCL-IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K ++ + + R PD++TYT+LI NIEE++ + Q I P+
Sbjct: 570 CKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPN 629
Query: 243 IYVYRSLI----DNLKKMGKVDL 261
+ +L+ D+L MG + +
Sbjct: 630 FATWNALVRCFFDSLGHMGPIHI 652
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 5/180 (2%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+ P + ++ + K+ +I+ A + G + KP + YN ++D + + G
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAG-RFKPSVPVYNALIDGMCKEG 258
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ + M + GV P+ +SY+ ++N+L ++L F +M G ++ T+T
Sbjct: 259 RIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFT 318
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LI G + E+L L+ M Q P++ Y +LI L G ++ A+ + ++M S
Sbjct: 319 PLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRS 378
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 11/246 (4%)
Query: 28 KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCT 85
K+ +PN YN +L A + + +D + ++ ++ + YT +
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK-- 229
Query: 86 QLLIFIEEVVQIAS--PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI 143
I++ ++A S+ V N +I K +IE A+ + + P++++Y+
Sbjct: 230 -----IDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+++ L G V FA M G + ++ L+ +L L ++ M + G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+P+++ Y LI G++EE+L++ + M++ P++ Y LID K G + A
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404
Query: 264 TIFEEM 269
+ M
Sbjct: 405 ETWNRM 410
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TY ++++ LGR ++ + MK G+ + ++N +++ + L F +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
GE G KP + Y L+D+ + L+ +MK+ + P+++ Y L+ L K +V
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 260 DLAMTIFEEMNS 271
D A +F EM++
Sbjct: 196 DAAHKLFVEMSN 207
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 3/255 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I LCK GN+ A++L + K P+ Y N ++ + + ++ + + D+
Sbjct: 451 NCLICALCKDGNIEEALQLFGEMSGKGC-KPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ Y AF+M D Q ++E++ P I N +I A K+ +E
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K L +F+ + G P +I+ NI++ L R G+VND L M G+ PD ++YN+L+
Sbjct: 570 KGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLI 629
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K+ + F ++ GI+PD +TY LI G ++ L
Sbjct: 630 NGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFI 689
Query: 241 PSIYVYRSLIDNLKK 255
P+ + LI+ + K
Sbjct: 690 PNEVTWSILINYIVK 704
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 138/346 (39%), Gaps = 87/346 (25%)
Query: 4 GYI-EKLCKAGNVSAAVRLLQSLRDKNIFLPNA------------------YNCVLVASA 44
GY+ LC+ G V A LL + + N L N YN +++A
Sbjct: 314 GYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGY 373
Query: 45 ETNDIDLSFQILKDLLVSSRTLSSD-----------------CYTNFARAFIMTDDCTQL 87
E + +F I+ D LV L S YT F C Q
Sbjct: 374 EPDAY--TFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGF-----CKQG 426
Query: 88 LIFIEEVVQIASPES-------IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
+ EE +I + S + N +I A K IE+AL +F + G CKPD+ T
Sbjct: 427 RL--EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN------------------ 182
+N +++ L + ++ + L+ + M GV+ + ++YNTL++
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544
Query: 183 -----------------LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
L K ++ L F EM GI P +++ LI RTG +
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVN 604
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++L+ DM + + P I Y SLI+ L KMG V A +F ++ S
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQS 650
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 20/273 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL----PN--AYNCVLVASAETNDIDLSFQILKDL 59
I LC+ VS A++LL+ ++FL P+ +N V+ I + ++L +
Sbjct: 247 IHALCENNRVSEALQLLE-----DMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRM 301
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV--QIASPESIIVVNRIIFAFAKSR 117
L+ R S+D T ++M C + + +I +P +++ N +I + S
Sbjct: 302 LL--RGFSTDALT---YGYLMHGLCRMGQVDEARALLNKIPNPNTVLY-NTLISGYVASG 355
Query: 118 QIEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ E+A L+++++ +PD T+NI++D L + G + L M P+ I+Y
Sbjct: 356 RFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITY 415
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L+N K RL+ M G+ + + Y LI + + GNIEE+L+LF +M
Sbjct: 416 TILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSG 475
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +P IY + SLI+ L K K++ A++++ +M
Sbjct: 476 KGCKPDIYTFNSLINGLCKNHKMEEALSLYHDM 508
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 121/271 (44%), Gaps = 10/271 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC+AG + A +LL + + F +A Y ++ +D + +L +
Sbjct: 279 NDVIHGLCRAGRIHEAAKLLDRMLLRG-FSTDALTYGYLMHGLCRMGQVDEARALLNKIP 337
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQL--LIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ L Y ++ + + L++ V+ P++ N +I K
Sbjct: 338 NPNTVL----YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAY-TFNIMIDGLVKKGY 392
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ AL + + + + +P++ITY I+++ + GR+ + SM G+ + + YN
Sbjct: 393 LVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNC 452
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ L K ++ L F EM G KPD+ T+ +LI+ + +EE+L L++DM +
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + Y +L+ + A + +EM
Sbjct: 513 VIANTVTYNTLVHAFLMRDSIQQAFKLVDEM 543
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 111/241 (46%), Gaps = 11/241 (4%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+ V+ A +++D + +L+D+ +S Y A + ++ L +E++
Sbjct: 207 TFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDM 266
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ + N +I ++ +I +A + D + D +TY ++ L R+G+V
Sbjct: 267 FLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQV 326
Query: 155 ND---MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL-IYFREMGESGIKPDLLT 210
++ +LN+ + P+ + YNTL++ R + + + M +G +PD T
Sbjct: 327 DEARALLNKIPN-------PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYT 379
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +ID + G + +L L N+M ++ P++ Y LI+ K G+++ A I M+
Sbjct: 380 FNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMS 439
Query: 271 S 271
+
Sbjct: 440 A 440
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 124 LIFDHIKGLKCKPDLITYNIVLDIL--GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L+ D C P +YN+VLDIL G RV N F M GV P ++ ++
Sbjct: 156 LLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAP--NVFYDMLSRGVSPTVYTFGVVMK 213
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + +D R+M + G P+ + Y LI + + E+L+L DM P
Sbjct: 214 ALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEP 273
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + +I L + G++ A + + M
Sbjct: 274 DVQTFNDVIHGLCRAGRIHEAAKLLDRM 301
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P + T+ +V+ L V V+ + M + G VP+ + Y TL++ L + R+ L
Sbjct: 203 PTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQL 262
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+M +PD+ T+ +I R G I E+ +L + M + Y L+ L +
Sbjct: 263 LEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCR 322
Query: 256 MGKVDLAMTIFEEM 269
MG+VD A + ++
Sbjct: 323 MGQVDEARALLNKI 336
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 12/186 (6%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++EV + II N +I A ++ +++A+ +F H++ +C+PDL TYN ++ + G
Sbjct: 323 LLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYG 382
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLL------NNLRKIRRLDLCLIYFREMGESG 203
R G + F +K G PD ++YN+LL N K+R + EM + G
Sbjct: 383 RCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDIS------EEMVKMG 436
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
D +TY +I +G+ G +E+LRL+ DMK P Y LID L K K++ A
Sbjct: 437 FGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEAS 496
Query: 264 TIFEEM 269
+ EM
Sbjct: 497 KVMSEM 502
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+++ N +++AF+K EK I + + + D +TYN ++ + G+ GR ++ L
Sbjct: 403 SPDAV-TYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEAL 461
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ MK +G PD ++Y L++ L K +++ EM ++G+KP L TY+ALI ++
Sbjct: 462 RLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAY 521
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G E+ FN M++ I+ Y ++D + ++ A +++EM
Sbjct: 522 AKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEM 572
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + AF + ++ EE+V++ + + N II + K + ++AL ++ +K
Sbjct: 409 YNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMK 468
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD +TY +++D+LG+ ++ + + M +AGV P +Y+ L+ K+ R
Sbjct: 469 SSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRV 528
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M ESGIK D L Y+ ++D F R I+++ L+ +M + P +Y ++
Sbjct: 529 EAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVML 588
Query: 251 DNL--KKMGKV 259
L + MG V
Sbjct: 589 PALVRENMGDV 599
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 6/240 (2%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
+N ++ A A + + + I ++ + + + +A I+ ++L + I+E+
Sbjct: 827 WNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQ 886
Query: 96 QI---ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ S SI++ ++ AFA++ + + +++ +K P + Y +++ +L R
Sbjct: 887 DMDLKISKSSILL---MLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFK 943
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
RV D+ + M EAG PD +N++L I + ++ + ++G+ PD TY
Sbjct: 944 RVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYN 1003
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LI + R EE L L + MK + P YRS+I K D A +FEE+ S+
Sbjct: 1004 TLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSN 1063
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 98 ASPESII-----VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR-- 150
A ES+I V N ++ +A++ EK +F+ ++ C+PD++++N +++ +
Sbjct: 254 AKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSC 313
Query: 151 ---VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
G ++L+E G+ PD I+YNTL++ + L + F M + +PD
Sbjct: 314 ATVSGLAIELLDEVGKF---GLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPD 370
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
L TY A+I +GR G ++ LF +K P Y SL+ K G + I E
Sbjct: 371 LWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISE 430
Query: 268 EM 269
EM
Sbjct: 431 EM 432
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 79/139 (56%), Gaps = 12/139 (8%)
Query: 141 YNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL----DLCL 193
YN ++ + R G +VN+M N M+E G PD +S+NTL+N K++ L +
Sbjct: 267 YNAMMGVYARNGNFEKVNEMFN---LMRERGCEPDIVSFNTLINA--KVKSCATVSGLAI 321
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
E+G+ G++PD++TY LI + R N++E++ +F+ M+ + +P ++ Y ++I
Sbjct: 322 ELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVY 381
Query: 254 KKMGKVDLAMTIFEEMNSS 272
+ G A +FE++ S+
Sbjct: 382 GRCGFALKAEHLFEKLKSN 400
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
KPDL +N VL + + +M + +++AG+ PD +YNTL+ + R + L
Sbjct: 961 KPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLS 1020
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+M G++P TY ++I +F + +++ LF +++ + Y ++ +
Sbjct: 1021 LMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYR 1080
Query: 255 KMGKVDLAMTIFEEMNSS 272
G A + E M +
Sbjct: 1081 TSGDHQKAENLLEIMKEA 1098
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 81/183 (44%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ + E+ + + + N ++ ++ + + +I+ I+ PD TYN ++ +
Sbjct: 950 VMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMY 1009
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R R + L+ MK G+ P +Y +++ K + D F E+ +G K D
Sbjct: 1010 CRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDR 1069
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y ++ + +G+ +++ L MK+ I P+ L+ + K G+ + A I +
Sbjct: 1070 SFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKN 1129
Query: 269 MNS 271
+ +
Sbjct: 1130 LRT 1132
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 78/168 (46%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I AF+K + ++A +F+ ++ K D Y++++ + G N MKEAG
Sbjct: 1040 MIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAG 1099
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P+ + + L+ + K + + + + G D L Y+++ID++ + G+ + +
Sbjct: 1100 IEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGI 1159
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+MK+ I P ++ I G+V+ A + + + DL
Sbjct: 1160 EKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQAVGFDL 1207
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 126/270 (46%), Gaps = 6/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
I LC+ G ++ +R + + LV S A+ DL+ +++ ++
Sbjct: 100 IRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEA 159
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+SS Y + + + +E + SP + N +I + ++EK
Sbjct: 160 RISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFE 219
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+F+ ++ C PD++TYN ++ L + R D+L E S + PD ++Y ++++
Sbjct: 220 LFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCS--PDVMTYTSIIS 277
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
RK+ +L+ + F EM SGI+P ++T+ LID FG+ GN+ + + M P
Sbjct: 278 GFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIP 337
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + SLID + G + L + +++ M +
Sbjct: 338 DVVTFTSLIDGYCRTGDIRLGLKVWDVMKA 367
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 14/275 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC+ G V L +++ LP+ YN ++ + N++D + +LK+
Sbjct: 202 NILIRGLCRVGEVEKGFELFNAMQSFGC-LPDVVTYNTLISGLCKANELDRACDLLKE-- 258
Query: 61 VSSRTLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
V SR +DC YT+ F + EE+++ +++ N +I F
Sbjct: 259 VQSR---NDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFG 315
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K + A + + + C PD++T+ ++D R G + L + MK V P+
Sbjct: 316 KIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIY 375
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y+ ++N L K R+ R++ S + P Y +ID F + GN++E+ + +M
Sbjct: 376 TYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEM 435
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++ RP + LI G++ A+ IF++M
Sbjct: 436 EEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKM 470
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
F +Y L+ +L ++ DL + M G D L+ SF + G + + +L
Sbjct: 93 FSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLII 152
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+++ ++ R S +VY L++ L K GKV A+ +F+E
Sbjct: 153 EVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKE 188
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVL--VASAETNDIDLSFQILKDLLV 61
I+ +CK G+ A +L + + PN YN VL + SAE ++ +DLL
Sbjct: 290 IDGICKDGHHEVANDILSRMPSYGLK-PNVVCYNTVLKGLCSAE------RWEEAEDLL- 341
Query: 62 SSRTLSSDCYTNFARAFIMTDD-CTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAK 115
+ DC + I+ D C L+ +E++++ +I +I F K
Sbjct: 342 -AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK 400
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+++A+++ ++ CKP+ I+Y IVL L R R D + M + G +P+ ++
Sbjct: 401 EGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVT 460
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+NTL+N + K ++ + ++M +G PDL++Y+ +ID G+ G EE+L L N M
Sbjct: 461 FNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI 520
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ I P+ +Y S+ L + G+ D + +F+ + +
Sbjct: 521 NKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDA 557
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 15/279 (5%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKD 58
MC+ +E C+ G +AVR LQ L K L ++ NC LV SA E +D ++L+
Sbjct: 145 MCHVILEAACRGGGFRSAVRALQVLHAKGCTL-DSGNCNLVVSAICEQGCVDEGVELLRK 203
Query: 59 LLVSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
L Y + M DD +L++ E+V++ P ++ N +I +
Sbjct: 204 LPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMV---EMVRVGCPPNVATFNTLIAYLCR 260
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR---VNDMLNEFASMKEAGVVPD 172
+ E+ + C PDL Y ++D + + G ND+L+ M G+ P+
Sbjct: 261 NGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR---MPSYGLKPN 317
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+ YNT+L L R + EM + D +T+ L+D F + G ++ + L
Sbjct: 318 VVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLE 377
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + P + Y ++I+ K G VD A+ + + M++
Sbjct: 378 QMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSA 416
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 115/268 (42%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + + +P+ Y V+ + +D + +LK++
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGC-IPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + I ++Q + + N +I K +E+A+
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ + L M G+ P+ I Y+++ + L
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R D + F + ++ ++ D Y A+I S + + ++ F M P+
Sbjct: 539 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 598
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G V A + E+ S
Sbjct: 599 STYTILIRGLASEGLVREAQDLLSELCS 626
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 143/309 (46%), Gaps = 43/309 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL--- 60
I LCK + A+ +L S+ KN +PN Y ++ + + LK +
Sbjct: 238 IAALCKGQAMDKAMEVLTSMV-KNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDG 296
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
V L D Y + + + ++ +V+ V N +I A+AK +
Sbjct: 297 VEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGK 356
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A+L+F ++ PD +TY V+ IL + GRV D + F M + G+ P I YN+
Sbjct: 357 VDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 416
Query: 179 LLNNL---RKIRRLD----------LCL--IYFREMGES--------------------G 203
L++ L K R + +CL I+F + +S G
Sbjct: 417 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 476
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+KPD++TY+ LID + G ++E+++L + M ++P+ YR+LI+ K+ ++ A+
Sbjct: 477 VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDAL 536
Query: 264 TIFEEMNSS 272
+F+EM SS
Sbjct: 537 VLFKEMESS 545
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 9/264 (3%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDLLVSSRT 65
K G V A+ + +R + + P+A Y V L S D L F+ + D +S
Sbjct: 353 KQGKVDEAMLVFSKMRQQGLN-PDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 411
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y + + + I E++ + I N II + K ++ ++ +
Sbjct: 412 I---VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 468
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
FD + + KPD+ITY+ ++D G++++ + + M G+ P+ ++Y TL+N K
Sbjct: 469 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCK 528
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
I R+ L+ F+EM SG+ PD++TY ++ +T + L+ + + + +
Sbjct: 529 ISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 588
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ L K D A+ +F+ +
Sbjct: 589 YNIILHGLCKNKLTDDALRMFQNL 612
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 130/270 (48%), Gaps = 11/270 (4%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCK+G V A+ + + D+ + N YN ++ N + + +++ ++L L+
Sbjct: 386 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 445
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEE-----VVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + + I+ C + + E +V+I II + +I + + ++++A
Sbjct: 446 TIFFNS-----IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 500
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + + + KP+ +TY +++ ++ R+ D L F M+ +GV PD I+YN +L
Sbjct: 501 MKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQG 560
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + RR + + ESG + +L TY ++ + +++LR+F ++ ++
Sbjct: 561 LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLE 620
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +ID L K+G+ A +F +S+
Sbjct: 621 ARTFNIMIDALLKVGRNGEAKDLFVAFSSN 650
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 5/204 (2%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT F D + E++ ++ + II A K + ++KA+ + +
Sbjct: 199 YTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMV 258
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI-----SYNTLLNNLRK 185
P+ TY ++ G+ + + ++ GV PD + +Y TLL
Sbjct: 259 KNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYAT 318
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
L M +GI PD Y LI ++ + G ++E++ +F+ M+QQ + P
Sbjct: 319 KGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVT 378
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++I L K G+V+ AM FE+M
Sbjct: 379 YGAVIGILCKSGRVEDAMLYFEQM 402
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
S ++ +I F K KA + + + PD++TY+ ++ L + ++
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL-----TYT 212
+ SM + GV+P+ +Y ++++ + + + +++ G++PD L TY
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYC 310
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+ + G + L + M + I P YVY LI K GKVD AM +F +M
Sbjct: 311 TLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKM 367
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 109/257 (42%), Gaps = 3/257 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC A L+ + D+ I L + ++ S + + L DL+V
Sbjct: 415 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 474
Query: 63 SRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ D Y+ + + + + + +V + + + +I + K ++
Sbjct: 475 I-GVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMG 533
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL++F ++ PD+ITYNI+L L + R + + E+G + +YN +L
Sbjct: 534 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 593
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + D L F+ + +K + T+ +ID+ + G E+ LF +
Sbjct: 594 HGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLV 653
Query: 241 PSIYVYRSLIDNLKKMG 257
P+ + YR + +N+ G
Sbjct: 654 PNYWTYRLMAENIIGQG 670
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML---NEFASMKEAGVV 170
A R + ++ + L C PD+ + I+L L R + L + A + G
Sbjct: 134 ADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSA 193
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD +SY T++N K + EM + I PD++TY+++I + + +++++ +
Sbjct: 194 PDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + + P+ Y S++ G+ A+ +++ S
Sbjct: 254 LTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRS 294
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 137 DLITYNIVLDILGRVGRVNDMLN-EFASMKEAGVVPDFISYNTLLNNL----RKIRRLDL 191
+ IT+ +L L R +D ++ M E +PD S LL L R L+L
Sbjct: 121 EAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALEL 180
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ G G PD+++YT +I+ F + G+ ++ +++M ++I P + Y S+I
Sbjct: 181 PHMMADGRG-GGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIA 239
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K +D AM + M
Sbjct: 240 ALCKGQAMDKAMEVLTSM 257
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 140/280 (50%), Gaps = 25/280 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +CK G + A++ L ++ PN +N +L + T + ++L D+L
Sbjct: 290 NVLINGICKEGRLDEAIKFLNNMPSYGC-QPNVITHNIILRSMCSTGRWMDAEKLLSDML 348
Query: 61 ---VSSRTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFA 112
S ++ + NF C Q L+ +E++ + + N ++
Sbjct: 349 RKGCSPSVVTFNILINFL--------CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 400
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGV 169
F K +++++A+ D + C PD++TYN +L L + G+V+ ++LN+ +S G
Sbjct: 401 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS---KGC 457
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P I+YNT+++ L K+ + + + EM G+KPD++TY++L+ R G ++E+++
Sbjct: 458 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 517
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F+D++ IRP+ Y S++ L K + D A+ M
Sbjct: 518 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 557
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 138/310 (44%), Gaps = 53/310 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK+G + A+++L D+ P+ YN +L ++ + + ++L
Sbjct: 188 NVLISGYCKSGEIDNALQVL----DRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL---- 239
Query: 61 VSSRTLSSDCYTNFARAFIMTD------DCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
R L +CY + I+ + Q + ++E+ S ++ N +I
Sbjct: 240 --DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR-------VNDMLNEFAS---- 163
K ++++A+ +++ C+P++IT+NI+L + GR ++DML + S
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357
Query: 164 ------------------------MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
M G P+ +SYN LL+ K +++D + Y M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G PD++TY L+ + + G ++ ++ + N + + P + Y ++ID L K+GK
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477
Query: 260 DLAMTIFEEM 269
+ A+ + +EM
Sbjct: 478 ERAIKLLDEM 487
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 107/220 (48%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ IL+ + + T +S Y F + + +++ +V I+ N ++
Sbjct: 375 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 434
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A K +++ A+ I + + C P LITYN V+D L +VG+ + M+ G+ P
Sbjct: 435 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 494
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y++L++ L + ++D + +F ++ GI+P+ +TY +++ ++ + ++
Sbjct: 495 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 554
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ +P+ Y LI+ + G A+ + E+ S
Sbjct: 555 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 594
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
N R + + F+E +V II +I F + + +KA + + ++
Sbjct: 119 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 178
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
PD+ITYN+++ + G +++ L M V PD ++YNT+L L +L
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQA 235
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ + PD++TYT LI++ + + ++++L ++M+ + +P + Y LI+
Sbjct: 236 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 295
Query: 253 LKKMGKVDLAMTIFEEMNS 271
+ K G++D A+ M S
Sbjct: 296 ICKEGRLDEAIKFLNNMPS 314
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G V AV +L L K + YN V+ ++ + + ++L ++
Sbjct: 430 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM-- 487
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ L D Y++ + + F ++ + + I N I+ KSRQ
Sbjct: 488 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 547
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFAS 163
++A+ ++ +CKP TY I+++ + G D+LNE S
Sbjct: 548 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 594
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ V AA R+L + K P+ ++ ++ A + + +D + IL ++
Sbjct: 169 IKALCQNDRVGAARRMLDEMARKGC-RPDEVSHTTIISALCKLDRLDEARGILAEM---- 223
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T Y A ++ + ++E+V + I+ AF K+R++ A
Sbjct: 224 -TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMAC 282
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + C P++ T+ +++ G+V+D L + M G P ISYN L+ L
Sbjct: 283 AILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGL 342
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
I L L F MG+S PD+ TY+ LID F + G+++ ++ ++NDM +P++
Sbjct: 343 CHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNV 402
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
VY +++D L K D A + ++M+
Sbjct: 403 VVYTNMVDVLCKKVMFDQAENLIDKMS 429
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC G++ A+ + + K+ LP+ Y+ ++ ++ D+D++ I D+
Sbjct: 336 NVLIRGLCHIGDLKRALFVFSCM-GKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMT 394
Query: 61 VSSRTLSSDCYTNFARAF---IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + YTN +M D L I+++ P + + N +I +
Sbjct: 395 NAGCKPNVVVYTNMVDVLCKKVMFDQAENL---IDKMSLENCPPNTLTFNTLIRSLCDLG 451
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ +AL +F ++ C P+ TYN +L L R G D L M G +SYN
Sbjct: 452 RAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYN 511
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T ++ L ++R + +I M GI+PD T+ A+I ++ + GN+ + + M
Sbjct: 512 TTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAV 571
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I Y SL+ L K+D AM +M
Sbjct: 572 NCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKM 603
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 118/264 (44%), Gaps = 4/264 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LCK + A +L + + +YN V+ A + F ++ +++
Sbjct: 204 ISALCKLDRLDEARGILAEMTP----VGASYNAVVHALCGQFRMREVFLVVDEMVHRGLR 259
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ YT+ AF + + +V ++ ++ F ++ AL +
Sbjct: 260 PDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGM 319
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ + P I+YN+++ L +G + L F+ M ++ +PD +Y+TL++ K
Sbjct: 320 WNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSK 379
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
LD+ + + +M +G KP+++ YT ++D + +++ L + M + P+
Sbjct: 380 AGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLT 439
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI +L +G+ A+ +F M
Sbjct: 440 FNTLIRSLCDLGRAGRALNVFHGM 463
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 98/235 (41%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AY ++ A + ++ ++ IL ++ + +T + F L +
Sbjct: 264 AYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWM 323
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V S I N +I +++AL +F + C PD+ TY+ ++D + G +
Sbjct: 324 VAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDL 383
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ ++ + M AG P+ + Y +++ L K D +M P+ LT+ L
Sbjct: 384 DVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTL 443
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I S G +L +F+ M++ P+ Y L+ L + G + A+ + EM
Sbjct: 444 IRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEM 498
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 114/272 (41%), Gaps = 8/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ L + V+A V + ++R + PN YN ++ A + + + + ++L ++
Sbjct: 131 NHLLDALLRENLVAAVVPVYDNMRKAGVE-PNVYTYNLLIKALCQNDRVGAARRMLDEMA 189
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+T A D + + E+ + + N ++ A ++
Sbjct: 190 RKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS-----YNAVVHALCGQFRMR 244
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ L+ D + +PD + Y ++ + + A M G VP+ ++ L+
Sbjct: 245 EVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLV 304
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++ L + M G P ++Y LI G+++ +L +F+ M +
Sbjct: 305 KGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCL 364
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y +LID K G +D+AM+I+ +M ++
Sbjct: 365 PDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNA 396
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 6/221 (2%)
Query: 57 KDLLVSSRTLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
+ L V S SDC Y+ F D + ++ +++V ++
Sbjct: 350 RALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMV 409
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K ++A + D + C P+ +T+N ++ L +GR LN F M+ G
Sbjct: 410 DVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCP 469
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ +YN LL+ L + + L EM G + L++Y I + I+E++ L
Sbjct: 470 PNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMIL 529
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M Q I+P + + ++I K G V A + M++
Sbjct: 530 LGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDA 570
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG-LKCK-PDLITYNIVLDILGRVGRV 154
+A PE +V I AFA++ ++AL F + L C P + YN +LD L R V
Sbjct: 86 VACPEGALVA--AICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLV 143
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
++ + +M++AGV P+ +YN L+ L + R+ EM G +PD +++T +
Sbjct: 144 AAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTI 203
Query: 215 IDSFGRTGNIEESLRLFNDM 234
I + + ++E+ + +M
Sbjct: 204 ISALCKLDRLDEARGILAEM 223
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 5/157 (3%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH-- 128
Y +C L + E++ S++ N I + R I++A+++
Sbjct: 475 YNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMI 534
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
I+G++ PD T+N ++ + G V M + ++Y +L++ L +
Sbjct: 535 IQGIQ--PDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHK 592
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDS-FGRTGNI 224
LD ++Y +M GI P+ T+ L+ F G I
Sbjct: 593 LDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTI 629
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 141/282 (50%), Gaps = 25/282 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +CK G + A++ L ++ PN +N +L + T + ++L D+L
Sbjct: 233 NVLINGICKEGRLDEAIKFLNNMPSYGC-QPNVITHNIILRSMCSTGRWMDAEKLLSDML 291
Query: 61 ---VSSRTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFA 112
S ++ + NF C Q L+ +E++ + + N ++
Sbjct: 292 RKGCSPSVVTFNILINFL--------CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 343
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGV 169
F K +++++A+ D + C PD++TYN +L L + G+V+ ++LN+ +S G
Sbjct: 344 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS---KGC 400
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P I+YNT+++ L K+ + + + EM G+KPD++TY++L+ R G ++E+++
Sbjct: 401 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 460
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
F+D++ IRP+ Y S++ L K + D A+ M S
Sbjct: 461 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS 502
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 138/310 (44%), Gaps = 53/310 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK+G + A+++L D+ P+ YN +L ++ + + ++L
Sbjct: 131 NVLISGYCKSGEIDNALQVL----DRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL---- 182
Query: 61 VSSRTLSSDCYTNFARAFIMTD------DCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
R L +CY + I+ + Q + ++E+ S ++ N +I
Sbjct: 183 --DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR-------VNDMLNEFAS---- 163
K ++++A+ +++ C+P++IT+NI+L + GR ++DML + S
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300
Query: 164 ------------------------MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
M G P+ +SYN LL+ K +++D + Y M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G PD++TY L+ + + G ++ ++ + N + + P + Y ++ID L K+GK
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420
Query: 260 DLAMTIFEEM 269
+ A+ + +EM
Sbjct: 421 ERAIKLLDEM 430
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 107/220 (48%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ IL+ + + T +S Y F + + +++ +V I+ N ++
Sbjct: 318 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 377
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A K +++ A+ I + + C P LITYN V+D L +VG+ + M+ G+ P
Sbjct: 378 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 437
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y++L++ L + ++D + +F ++ GI+P+ +TY +++ ++ + ++
Sbjct: 438 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 497
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ +P+ Y LI+ + G A+ + E+ S
Sbjct: 498 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 537
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
N R + + F+E +V II +I F + + +KA + + ++
Sbjct: 62 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 121
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
PD+ITYN+++ + G +++ L M V PD ++YNT+L L +L
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQA 178
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ + PD++TYT LI++ + + ++++L ++M+ + +P + Y LI+
Sbjct: 179 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 238
Query: 253 LKKMGKVDLAMTIFEEMNS 271
+ K G++D A+ M S
Sbjct: 239 ICKEGRLDEAIKFLNNMPS 257
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G V AV +L L K + YN V+ ++ + + ++L ++
Sbjct: 373 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM-- 430
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ L D Y++ + + F ++ + + I N I+ KSRQ
Sbjct: 431 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 490
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFAS 163
++A+ ++ +CKP TY I+++ + G D+LNE S
Sbjct: 491 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 537
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 5/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G + A ++ S+ DK + P+ YN ++ + + IL ++L
Sbjct: 157 NTLIGAYCREGLLEEAFEIMNSMADKGL-KPSLFTYNAIINGLCKKGRYARAKGILIEML 215
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y D+ ++ IF E + Q P+ ++ + +I F+++R +
Sbjct: 216 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPD-LVSFSSLIAVFSRNRHL 274
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++AL+ F +K PD + Y +++ R G + + L M E G V D I+YNT+
Sbjct: 275 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 334
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
LN L K + L F EM E G PD T+T LI + GN+ ++L LF M Q+ I
Sbjct: 335 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 394
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P I Y +LID K+G+++ A +++ M S
Sbjct: 395 KPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 426
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP---NAYNCVLVASAETNDIDLSFQILKDL 59
N I LCK G + A +L + NI L YN +LV S ++ + +I ++
Sbjct: 192 NAIINGLCKKGRYARAKGILIEML--NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 249
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
L +++ F Q L++ ++ + ++ ++ + ++ +
Sbjct: 250 LRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM 309
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+AL I D + C D+I YN +L+ L + + D F M E G +PDF ++ TL
Sbjct: 310 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ + + L F M + IKPD++ Y LID F + G +E++ L++ M ++I
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y LI+ +G V A +++ M
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVM 459
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 36/300 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I +A + + LR K + NA N +L + + ++L++++ ++++ S
Sbjct: 55 IRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGI 114
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
L+ A + F+ E+ ++ N +I A+ + +E+A
Sbjct: 115 ELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFE 174
Query: 125 IFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNE--------------------- 160
I + + KP L TYN +++ L GR R +L E
Sbjct: 175 IMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESC 234
Query: 161 -----------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
F M GVVPD +S+++L+ + R LD L+YFR+M + G+ PD +
Sbjct: 235 RRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNV 294
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
YT L+ + R GN+ E+L++ ++M +Q + Y ++++ L K + A +F+EM
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C+ GN++ A+ L ++ +NI P+ AYN ++ + +++ + + L D ++S
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNI-KPDIVAYNTLIDGFCKVGEMEKASE-LWDGMISR 427
Query: 64 RTLSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + Y A+ ++ + +++ +++ N +I + +S KA
Sbjct: 428 KIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKA 487
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ PD I+YN +++ R ++ M++ G++PD I+YN ++N
Sbjct: 488 DEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNG 547
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ R+ + R+M E GI PD TYTALI+ N+ E+ R ++M Q+ P
Sbjct: 548 FCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 36/296 (12%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
C+ GN+ A+++ + ++ L AYN +L + + + ++ +++
Sbjct: 304 CRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDF 363
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
+T + T+ L + Q I+ N +I F K ++EKA ++D
Sbjct: 364 YTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDG 423
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDML------------------------------ 158
+ K P+ ITY I+++ VG V++
Sbjct: 424 MISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGD 483
Query: 159 ----NEF-ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+EF M GV PD ISYNTL+N + +D ++ +M + G+ PD++TY
Sbjct: 484 SSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNV 543
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ F R G ++E+ + M ++ I P Y +LI+ ++ A +EM
Sbjct: 544 VMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEM 599
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 114/250 (45%), Gaps = 3/250 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
C+ N S A + + + + +P+ +++ ++ + +D + +D+
Sbjct: 234 CRRDNFSEAKEIFGEMLRQGV-VPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPD 292
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ YT + + + L +E+++ +I N I+ K + + A +FD
Sbjct: 293 NVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFD 352
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ PD T+ ++ + G + L+ F +M + + PD ++YNTL++ K+
Sbjct: 353 EMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVG 412
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
++ + M I P+ +TY LI+++ G++ E+ RL++ M ++ I+P++
Sbjct: 413 EMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCN 472
Query: 248 SLIDNLKKMG 257
++I + G
Sbjct: 473 TVIKGYCRSG 482
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+V + +I + ++R++ + F + L+ K L++ N +LG + +++ + +
Sbjct: 49 LVFDLLIRTYVQARKLREGTEAF---RILRSKGYLVSINACNSLLGGLVKIDWVELAWEV 105
Query: 164 MKE---AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+E +G+ + + N ++N L K + D + EM +GI D++TY LI ++ R
Sbjct: 106 HREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCR 165
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +EE+ + N M + ++PS++ Y ++I+ L K G+ A I EM
Sbjct: 166 EGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 214
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 5/208 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK G + A L + + IF PN Y ++ A + +F+ L D++
Sbjct: 402 NTLIDGFCKVGEMEKASELWDGMISRKIF-PNHITYGILINAYCSVGHVSEAFR-LWDVM 459
Query: 61 VSSRTLSSDCYTNFA-RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + N + + + D ++ F+ ++ I N +I F + +
Sbjct: 460 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNM 519
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KA L + ++ PD+ITYN+V++ R GR+ + M E G+ PD +Y L
Sbjct: 520 DKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTAL 579
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPD 207
+N L+ + EM + G PD
Sbjct: 580 INGHVTQDNLNEAFRFHDEMLQRGFAPD 607
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I +LC G S A+++ + YN ++ DI+ + + + +L
Sbjct: 419 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 478
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y ++ + ++ + + N ++ F+K ++E
Sbjct: 479 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 538
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A F + P+ ++Y ++D + G+V+ L+ M+E G P+ SYN ++N
Sbjct: 539 ASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVIN 598
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K R +M E G+ P+++TYT LID R G + + ++F+DM++++ P
Sbjct: 599 GLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 658
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y SLI L + GK D A + +EM
Sbjct: 659 NLYTYSSLIYGLCQEGKADEAEILLKEM 686
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 122/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I L + G + A+ L + + + +PN YN ++ + +I +
Sbjct: 387 ISGLSRLGKLEVAIGLYHKMLKEGL-VPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 445
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + + D + ++ E+++++ +++ N +I + + A
Sbjct: 446 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 505
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D +K C+PD TYN ++ + G++ F M E G+ P+ +SY TL++
Sbjct: 506 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGH 565
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D+ L M E G P++ +Y A+I+ + E+ ++ + M +Q + P++
Sbjct: 566 SKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNV 625
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LID L + G+ A IF +M
Sbjct: 626 ITYTTLIDGLCRNGRTQFAFKIFHDM 651
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC G++ A+ L + + K LP YN ++ +++ + ++L +
Sbjct: 454 NEIIKGLCLGGDIEKAMVLFEKML-KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 512
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y F + +E+V+ + + +I +K +++
Sbjct: 513 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVD 572
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + ++ + C P++ +YN V++ L + R ++ M E G++P+ I+Y TL+
Sbjct: 573 IALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLI 632
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L + R F +M + P+L TY++LI + G +E+ L +M+++ +
Sbjct: 633 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 692
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + SLID +G++D A + M
Sbjct: 693 PDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ + ++ Q + +I ++R ++ A +FD + C P+ +TY+ +++ L
Sbjct: 261 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 320
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
GRV++ L+ M E G+ P +Y + L I + + M + G +P++
Sbjct: 321 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 380
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TYTALI R G +E ++ L++ M ++ + P+ Y +LI+ L G+ A+ IF
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 440
Query: 269 MNSSLS 274
M S
Sbjct: 441 MEGHGS 446
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 126/304 (41%), Gaps = 38/304 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I L K G V A +L + ++ P+ Y +++ ++DL+F + ++
Sbjct: 244 NTLINILSKKGKVREAELILSQIFQYDLS-PDVFTYTSLILGHCRNRNLDLAFGVFDRMV 302
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S Y+ + L +EE+++ ++ I A E
Sbjct: 303 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 362
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + +K C+P++ TY ++ L R+G++ + + M + G+VP+ ++YN L+
Sbjct: 363 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 422
Query: 181 NNLRKIRRLD---------------------------LCL--------IYFREMGESGIK 205
N L R LCL + F +M + G
Sbjct: 423 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 482
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P ++TY LI+ + GN+ + RL + MK+ P + Y L+ K GK++ A
Sbjct: 483 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 542
Query: 266 FEEM 269
F+EM
Sbjct: 543 FQEM 546
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 7/255 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY+ K GNV+ A RLL +++ N P+ YN ++ ++ ++ + ++++
Sbjct: 493 NGYLTK----GNVNNAARLLDLMKE-NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT L +E + ++ ++ N +I +K +
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I D + P++ITY ++D L R GR F M++ +P+ +Y++L+
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 667
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + + D I +EM G+ PD +T+T+LID F G I+ + L M +
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCK 727
Query: 241 PSIYVYRSLIDNLKK 255
P+ Y L+ L+K
Sbjct: 728 PNYRTYSVLLKGLQK 742
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+ E+ + S+ N ++ AK +E A ++ + +P L+T+N +++IL
Sbjct: 192 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 251
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+V + + + + + PD +Y +L+ + R LDL F M + G P+ +
Sbjct: 252 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 311
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY------------------------- 244
TY+ LI+ G ++E+L + +M ++ I P++Y
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371
Query: 245 ----------VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI L ++GK+++A+ ++ +M
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 406
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 124/294 (42%), Gaps = 31/294 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ G A ++ + +K LPN Y+ ++ + D + +LK++
Sbjct: 632 IDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM--ER 688
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIAS---------------------P 100
+ L+ D +T+ F++ + + +V +
Sbjct: 689 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLE 748
Query: 101 ESIIVVNRIIFAFA---KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
E + V + +++F+ K E + + + C+P L TY+ ++ L R GR +
Sbjct: 749 EKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEA 808
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
MKE G PD Y +LL K +D L F + G + L Y ALI +
Sbjct: 809 EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICA 868
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ G +EE+ LF++M +++ V+ L+D L K G++DL M + M S
Sbjct: 869 LCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMES 922
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A +I + + I G+ L + N +L L + V N + M +G
Sbjct: 176 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 235
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P +++NTL+N L K ++ + ++ + + PD+ TYT+LI R N++ +
Sbjct: 236 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 295
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F+ M ++ P+ Y +LI+ L G+VD A+ + EEM
Sbjct: 296 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 336
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A K+ +++ AL IF I+ + L Y ++ L + G+V + F +M E
Sbjct: 830 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 889
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D I + L++ L K LDLC+ M P++ TY L R G ES
Sbjct: 890 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESE 949
Query: 229 RLFNDMK 235
L + +K
Sbjct: 950 PLADKLK 956
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 73/303 (24%), Positives = 137/303 (45%), Gaps = 38/303 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN SAA+RLL+S+ N P+ Y ++ + + + +F + ++
Sbjct: 177 INGLCKVGNTSAAIRLLRSMEQGNC-QPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG 235
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT+ A + + + ++V +++ + ++ A K ++ +A
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I D + +PD++TY ++D +++ + F M G PD ISY TL+N
Sbjct: 296 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 355
Query: 184 RKIRRLD--------LC-------------LIY--------------FREMGESGIKPDL 208
KI ++D +C L+Y F EM G PDL
Sbjct: 356 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDL 415
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY+ L+DS + ++EE++ L ++ + P I VY +ID + + G+++ A +F
Sbjct: 416 VTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 475
Query: 269 MNS 271
++S
Sbjct: 476 LSS 478
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 132/271 (48%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC LL + + I LP+ ++ V+ A + + + +I+ D+++
Sbjct: 247 VHALCNLCEWKHVTTLLNQMVNSKI-LPDVVIFSTVVDALCKEGKVTEAHEIV-DMMIQ- 303
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R + D YT + + + + + +V+ +I +I + K +I+K
Sbjct: 304 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 363
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ +F+ + + PD TYN ++ L VGR+ D + F M G +PD ++Y+ LL+
Sbjct: 364 AMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 423
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L K R L+ + + + S + PD+ Y +ID R G +E + LF+++ + + P
Sbjct: 424 SLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 483
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
S++ Y +I L K G ++ A +F EM+ +
Sbjct: 484 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGN 514
Score = 87.0 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 37/274 (13%)
Query: 33 PNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN Y N ++ + N + +F +L +L +T R + + L
Sbjct: 98 PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 157
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ +++ +I K A+ + ++ C+PD++ Y ++D L +
Sbjct: 158 FDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK 217
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISY----------------NTLLNNLRKIRRLDLCLI 194
+V + N F+ M G+ PD +Y TLLN + + L +I
Sbjct: 218 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 277
Query: 195 Y-------------------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ M + G++PD++TYT L+D ++E++++F+ M
Sbjct: 278 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 337
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ P + Y +LI+ K+ K+D AM +FEEM
Sbjct: 338 RKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEM 371
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 87/173 (50%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P ++ +N +I +F ++ A + I L +PD T+ ++ L G++ + L+
Sbjct: 97 PPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALH 156
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M + G P+ ++Y TL+N L K+ + R M + +PD++ YT++IDS
Sbjct: 157 LFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC 216
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + E+ LF+ M Q I P I+ Y SL+ L + + T+ +M +S
Sbjct: 217 KDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 269
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 89/176 (50%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ + P SI+ +++ + AK + L + + P++ T NI+++ + R
Sbjct: 56 LLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNR 115
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V + A + + G PD ++ TL+ L ++ L F +M + G +P+++TY
Sbjct: 116 VGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGT 175
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ + GN ++RL M+Q +P + +Y S+ID+L K +V A +F +M
Sbjct: 176 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM 231
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 118/268 (44%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V+ A ++ + + + P+ Y ++ +++D + ++ D++V
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGV-EPDVVTYTTLMDGHCLQSEMDEAVKVF-DMMVR- 338
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + D YT + + + EE+ + N +++ +++
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ +F + PDL+TY+I+LD L + + + + +++ + + PD YN +++
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + L+ F + G+ P + TY +I + G + E+ +LF +M P
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 518
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ + + A+ + EEM
Sbjct: 519 DGCTYNTIARGFLQNNETLRAIQLLEEM 546
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 42/209 (20%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N + LC G + A+ L + VA + D+ +++ IL D L
Sbjct: 384 NTLMYGLCHVGRLQDAIALFHEM---------------VARGQMPDL-VTYSILLDSLCK 427
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+R L A A + + + L +P+ I V N II ++ ++E A
Sbjct: 428 NRHLEE------AMALLKAIEASNL-----------NPD-IQVYNIIIDGMCRAGELEAA 469
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL--- 179
+F ++ P + TYNI++ L + G +N+ F M PD +YNT+
Sbjct: 470 RDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARG 529
Query: 180 -LNNLRKIRRLDLCLIYFREMGESGIKPD 207
L N +R + L EM G D
Sbjct: 530 FLQNNETLRAIQL----LEEMLARGFSAD 554
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 5/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK + + LL+ + + + PN +N ++ A + + + + + ++
Sbjct: 124 INGFCKCMDTEVTLELLEEMLARGL-RPNLALFNMMMDAHSRSGKHEQVIALFERMVEHE 182
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y AF ++ + F++ + + N ++ K+ + AL
Sbjct: 183 CRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHLGAYNTLMNRLGKANKAHAAL 242
Query: 124 LIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
IF IK KPDL+TYN+++D+LG+VG++++ + + M+ PD SYNTLL
Sbjct: 243 EIFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMR-LHFQPDIFSYNTLLGR 301
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + R+DL +M G++ D +TY L++ + R GN++ +L +MK P+
Sbjct: 302 LGRAGRVDLFASVLDDMSRDGVQQDRITYAILVEGYARAGNLDVALAYLEEMKSSGFSPT 361
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+++L K G+ A + +EM +
Sbjct: 362 PSALEVLVNSLLKAGRFGAAEAVVQEMAA 390
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D L +EE++ ++ + N ++ A ++S + E+ + +F+ +
Sbjct: 120 YAALINGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMV 179
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+C+PD +Y ++++ GR+++ ++ P +YNTL+N L K +
Sbjct: 180 EHECRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAPHLGAYNTLMNRLGKANKAH 239
Query: 191 LCL-IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L I+++ KPDL+TY LID G+ G I+E + M+ +P I+ Y +L
Sbjct: 240 AALEIFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMR-LHFQPDIFSYNTL 298
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
+ L + G+VDL ++ ++M+
Sbjct: 299 LGRLGRAGRVDLFASVLDDMS 319
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 128/277 (46%), Gaps = 14/277 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR---DKNIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
N I LC G ++ A ++ D + F Y ++ + D +++ ++L+++
Sbjct: 87 NFLISSLCSLGKMAEARWRFSYMKKYCDPDEF---TYAALINGFCKCMDTEVTLELLEEM 143
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQI---ASPESIIVVNRIIFAFAKS 116
L + + A + Q++ E +V+ P+S V ++ AFA S
Sbjct: 144 LARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEHECRPDPKSYRV---LVEAFAVS 200
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFIS 175
+I++A + P L YN +++ LG+ + + L F +K+ PD ++
Sbjct: 201 GRIDEAFGFVQRYADSENAPHLGAYNTLMNRLGKANKAHAALEIFYKIKDRPNYKPDLVT 260
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN L++ L K+ ++D C +++M +PD+ +Y L+ GR G ++ + +DM
Sbjct: 261 YNVLIDLLGKVGKIDECWSCYQKM-RLHFQPDIFSYNTLLGRLGRAGRVDLFASVLDDMS 319
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ Y L++ + G +D+A+ EEM SS
Sbjct: 320 RDGVQQDRITYAILVEGYARAGNLDVALAYLEEMKSS 356
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+IF+ ++ +P+ TYN ++ L +G++ + F+ MK+ PD +Y L+N
Sbjct: 69 MIFESMRKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYMKKY-CDPDEFTYAALINGF 127
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ L EM G++P+L + ++D+ R+G E+ + LF M + + RP
Sbjct: 128 CKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEHECRPDP 187
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
YR L++ G++D A + S
Sbjct: 188 KSYRVLVEAFAVSGRIDEAFGFVQRYADS 216
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+TY I+L I V D L F M+ + + P Y+ ++ L +++ + + F
Sbjct: 14 VTYRILLRIYVDASMVEDALETFHKMEFSEIKPTLDDYHYIMFKLIRLKCPRVVPMIFES 73
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M ++ ++P+ TY LI S G + E+ F+ MK + P + Y +LI+ K
Sbjct: 74 MRKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYMK-KYCDPDEFTYAALINGFCKCMD 132
Query: 259 VDLAMTIFEEM 269
++ + + EEM
Sbjct: 133 TEVTLELLEEM 143
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 127/271 (46%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ +CK G + A++LL + D + PN +Y+C++ + + +++L+F + +
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVD-PNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + +T + M + L + ++Q +++ N +I + +E
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + D ++ C P++ TY+I++D + G + + M G P+ ++Y ++
Sbjct: 367 EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMV 426
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K D +M G P+ +T+ I G +E +++L M+
Sbjct: 427 DVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCL 486
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+I Y L+D L +M K + A +F+E+ +
Sbjct: 487 PNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II + + E+AL +F I CKP + YN +LD L + + + +MK+ G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
++P+ +YN LL L K R+D F EM G PD +TYT ++ S + G I+++
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L + +PS+ VY +LID + K G++++A+ + EM
Sbjct: 235 EL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEM 270
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 7/258 (2%)
Query: 14 NVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
N+S+ + ++ + N F A Y ++ ++D+ IL+ + + D +
Sbjct: 53 NLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
+ Q L + + ++ + N ++ A + + ++ ++K
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
P++ TYNI+L L + RV+ F M G PD ++Y T++++L K ++D
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
RE+ KP + Y ALID + G IE +++L +M + P++ Y +I+
Sbjct: 233 A----RELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Query: 252 NLKKMGKVDLAMTIFEEM 269
+L G V+LA +F +M
Sbjct: 288 SLCVSGNVELAFALFAQM 305
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 8/263 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K+G++ A + PN Y C++ + + D + +++ + +
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGC-RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T ++ + F + + +E + +I N ++ A + + E+A
Sbjct: 450 CTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F I+ +P+L+TYN VL R G + + L F G PD I+YNT+++
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569
Query: 184 RKIRRLDLCL-IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K ++ + + R PD++TYT+LI NIEE++ + Q I P+
Sbjct: 570 CKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPN 629
Query: 243 IYVYRSLI----DNLKKMGKVDL 261
+ +L+ D+L MG + +
Sbjct: 630 FATWNALVRCFFDSLGHMGPIHI 652
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 5/180 (2%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+ P + ++ + K+ +I+ A + G + KP + YN ++D + + G
Sbjct: 204 EMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAG-RFKPSVPVYNALIDGMCKEG 258
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ + M + GV P+ +SY+ ++N+L ++L F +M G ++ T+T
Sbjct: 259 RIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFT 318
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LI G + E+L L+ M Q P++ Y +LI L G ++ A+ + ++M S
Sbjct: 319 PLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRS 378
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 11/249 (4%)
Query: 28 KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCT 85
K+ +PN YN +L A + + +D + ++ ++ + YT +
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK-- 229
Query: 86 QLLIFIEEVVQIAS--PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI 143
I++ ++A S+ V N +I K +IE A+ + + P++++Y+
Sbjct: 230 -----IDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+++ L G V FA M G + ++ L+ +L L ++ M + G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+P+++ Y LI G++EE+L++ + M++ P++ Y LID K G + A
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404
Query: 264 TIFEEMNSS 272
+ M S
Sbjct: 405 ETWNRMISH 413
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TY ++++ LGR ++ + MK G+ + ++N +++ + L F +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
GE G KP + Y L+D+ + L+ +MK+ + P+++ Y L+ L K +V
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195
Query: 260 DLAMTIFEEMNS 271
D A +F EM++
Sbjct: 196 DAAHKLFVEMSN 207
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 5/265 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN S A+R L+S+ +N P Y+ ++ + + + + + D+L
Sbjct: 166 INGLCKVGNTSTAIRFLRSMEQRNC-RPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKG 224
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ ++ Y++ + + + +F + + P+ + N ++ A K + KA
Sbjct: 225 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQL-TFNTLVDALCKEGMVVKA 283
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ D + KPD++TYN ++D + +N F +M G VP ISY TL+N
Sbjct: 284 HYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLING 343
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
KI+ +D + F EM + G+ PD +TY LI G + +++ LF++M P
Sbjct: 344 YCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPD 403
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFE 267
+ YR L D L K ++ AM + +
Sbjct: 404 LVTYRILFDYLCKNHRLAEAMVLLK 428
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G+ A+RL ++ + I +P+ +N ++ A + + + ++ ++ S
Sbjct: 236 IHGLCILGHWKEAIRLFYAMIHRKI-MPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSD 294
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + + + + + +V+ S+I +I + K + ++KA+
Sbjct: 295 LKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAM 354
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + PD +TYN ++ L VGR+ D + F M G +PD ++Y L + L
Sbjct: 355 GLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYL 414
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL ++ + + + + PD+ Y+ ++D R G +E + LF+ + + + P +
Sbjct: 415 CKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDV 474
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I+ L + G + A +F EM+
Sbjct: 475 RTYTIMINGLCQQGLLAEASKLFGEMD 501
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ +++++ S +I +I +AL +FD + G +PD++TY +++ L +
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
VG + + SM++ P + Y+T++++L K R+L L F +M GI P+ T
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y++LI G+ +E++RLF M ++I P + +L+D L K G V A + + M
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291
Query: 271 SS 272
S
Sbjct: 292 QS 293
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + +N +I +F ++ A + I L +P T+ ++ L G++ + L
Sbjct: 86 PHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQ 145
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M G PD ++Y TL+N L K+ + + R M + +P ++ Y+ +IDS
Sbjct: 146 LFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLC 205
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + E+L LF+DM + I P+ + Y SLI L +G A+ +F M
Sbjct: 206 KDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM 255
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 108/241 (44%), Gaps = 8/241 (3%)
Query: 34 NAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFI 91
N Y N ++ + N + +F +L D+L S+ +T R + + L
Sbjct: 88 NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 147
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+++ ++ +I K A+ ++ C+P ++ Y+ ++D L +
Sbjct: 148 DKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKD 207
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
++ + L+ F+ M G+ P+ +Y++L++ L + + F M I PD LT+
Sbjct: 208 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 267
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL---KKMGKVDLAMTIFEE 268
L+D+ + G + ++ + + M Q ++P + Y SL+D +MGK + +F+
Sbjct: 268 NTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGK---TVNVFDT 324
Query: 269 M 269
M
Sbjct: 325 M 325
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 116/271 (42%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK G V A ++ + ++ P+ YN ++ +++ + + ++
Sbjct: 268 NTLVDALCKEGMVVKAHYVVDVMIQSDL-KPDVVTYNSLMDGHCLRSEMGKTVNVFDTMV 326
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S YT + + + EE+ Q + N +I ++
Sbjct: 327 RKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ +F + PDL+TY I+ D L + R+ + + ++ + PD Y+ ++
Sbjct: 387 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 446
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + L+ F ++ G+ PD+ TYT +I+ + G + E+ +LF +M +
Sbjct: 447 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCS 506
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y + + + A+ +F+EM S
Sbjct: 507 PNACTYNLITRGFLRNNETLRAIQLFQEMLS 537
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
++ ++E A +F + PD+ TY I+++ L + G + + F M E G P
Sbjct: 448 GMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSP 507
Query: 172 DFISYNTL----LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ +YN + L N +R + L F+EM G D+ T T L++ G +++S
Sbjct: 508 NACTYNLITRGFLRNNETLRAIQL----FQEMLSRGFSIDVSTTTLLVEMLSDDG-LDQS 562
Query: 228 LR 229
++
Sbjct: 563 VK 564
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 2 CNGYIEKLCKA-GNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDL 59
CN ++ +L + + A R+ + + + +YN +L + + + +L +
Sbjct: 219 CNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQM 278
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
Y+ + + ++L +EE+ + + N II K+ ++
Sbjct: 279 EFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRV 338
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A + +K + PD + Y ++ G+ G V+ F MK +VPDF++Y ++
Sbjct: 339 VEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSM 398
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L + ++ F EM G+KPD +TYTALID + + G ++E+ L N M ++ +
Sbjct: 399 IHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P++ Y +L+D L K G+VD+A + EM+
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 140/276 (50%), Gaps = 16/276 (5%)
Query: 9 LCKAGNVSAAVRLLQSLRDK-NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LC+ G V A LL + + N+ +Y+ ++ + + +++++L + L
Sbjct: 262 LCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL--QRKGLK 319
Query: 68 SDCYT-NFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKSRQIEKA 122
+ YT N +F+ T ++ E+V+++ + I +V +I F KS +
Sbjct: 320 PNQYTYNSIISFLCK---TGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE 376
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+FD +K K PD +TY ++ L + G+V + F+ M G+ PD ++Y L++
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K + +M E G+ P+++TYTAL+D + G ++ + L ++M ++ ++P+
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
+ Y +LI+ L K+G ++ A+ + EEM DLAG
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEM-----DLAG 527
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 127/267 (47%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ + ++L++ L+ K + PN YN ++ +T + + Q+L+ ++ +
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGL-KPNQYTYNSIISFLCKTGRVVEAEQVLR-VMKNQ 351
Query: 64 RTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
R + YT F + + + +E+ + + +I ++ ++ +A
Sbjct: 352 RIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEA 411
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F + KPD +TY ++D + G + + + M E G+ P+ ++Y L++
Sbjct: 412 RKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDG 471
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K +D+ EM E G++P++ TY ALI+ + GNIE++++L +M P
Sbjct: 472 LCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPD 531
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +++D KMG++ A + M
Sbjct: 532 TITYTTIMDAYCKMGEMAKAHELLRIM 558
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 122/255 (47%), Gaps = 7/255 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N I LCK G V A ++L+ ++++ IF N Y ++ ++ ++ + +++ ++
Sbjct: 326 NSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR 385
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
YT+ + E++ + +I + K+ ++++
Sbjct: 386 KKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKE 445
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV---NDMLNEFASMKEAGVVPDFISYNT 178
A + + + P+++TY ++D L + G V N++L+E M E G+ P+ +YN
Sbjct: 446 AFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE---MSEKGLQPNVCTYNA 502
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K+ ++ + EM +G PD +TYT ++D++ + G + ++ L M +
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 239 IRPSIYVYRSLIDNL 253
++P+I + L++
Sbjct: 563 LQPTIVTFNVLMNGF 577
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 122/271 (45%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I K+GNVS +L ++ K I +P+ Y ++ + + + ++ ++L S
Sbjct: 364 ISGFGKSGNVSVEYKLFDEMKRKKI-VPDFVTYTSMIHGLCQAGKVVEARKLFSEML--S 420
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ L D YT + + + ++V+ +++ ++ K +++
Sbjct: 421 KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDI 480
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + +P++ TYN +++ L +VG + + M AG PD I+Y T+++
Sbjct: 481 ANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMD 540
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ + R M + G++P ++T+ L++ F +G +E+ RL M + I P
Sbjct: 541 AYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMP 600
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + SL+ + + I++ M++
Sbjct: 601 NATTFNSLMKQYCIRNNMRATIEIYKGMHAQ 631
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 23/279 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CKAG + A L + +K + PN Y ++ + ++D++ ++L ++ S
Sbjct: 434 IDGYCKAGEMKEAFSLHNQMVEKGL-TPNVVTYTALVDGLCKCGEVDIANELLHEM--SE 490
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ L + Y + Q + +EE+ I I+ A+ K ++ K
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550
Query: 122 A--LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A LL KGL+ P ++T+N++++ G + D M + G++P+ ++N+L
Sbjct: 551 AHELLRIMLDKGLQ--PTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL 608
Query: 180 L------NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+ NN+R + ++ M G+ PD TY LI + N++E+ L +
Sbjct: 609 MKQYCIRNNMRATIEI------YKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE 662
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M ++ + Y SLI K K + A +FEEM +
Sbjct: 663 MVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTH 701
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 3/248 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V A LL + +K + PN YN ++ + +I+ + ++++++ ++
Sbjct: 469 VDGLCKCGEVDIANELLHEMSEKGL-QPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT A+ + + + ++ +I+ N ++ F S +E
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE 587
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + P+ T+N ++ + + + M GVVPD +YN L+
Sbjct: 588 RLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGH 647
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R + +EM E G +Y +LI F + EE+ +LF +M+
Sbjct: 648 CKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEK 707
Query: 244 YVYRSLID 251
+Y +D
Sbjct: 708 EIYDIFVD 715
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 60/112 (53%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F E GV + +SYN +L+ L ++ ++ +M G PD+++Y+ ++D + +
Sbjct: 240 FREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ 299
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + L+L +++++ ++P+ Y Y S+I L K G+V A + M +
Sbjct: 300 VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQ 351
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 132/265 (49%), Gaps = 30/265 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQS-LRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LC+ GN+S A++L Q L D +++ N + +S+ I+ D L R
Sbjct: 208 MKGLCRTGNISIALKLHQEMLNDSSLYGINF-----------KPVVISYSIIIDALCKDR 256
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
D+ L F E VQ +P ++I +I F + E+A
Sbjct: 257 R---------------EDEARDL--FEEMKVQGMTP-TVISYTSLIHGFCCGGKWEEAKR 298
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ + +P+++T+N+++D+L + G+V + + M + G+VP+ ++YN+L+
Sbjct: 299 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 358
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ L+ F M G +PD++ YT LI+ + +T +EE+++L+N M Q RP +
Sbjct: 359 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 418
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +L+ L + GKV A +F M
Sbjct: 419 TYGALLTGLFQGGKVGDAKKLFGVM 443
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 15/272 (5%)
Query: 10 CKAGNVSA--AVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
CK GN++A A + + N P +++ +L A+ F + + +S +
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSG--I 127
Query: 67 SSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S DC T + + L + +++ I+ +I +I KA L
Sbjct: 128 SPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAAL 187
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVN-------DMLNEFASMKEAGVVPDFISYN 177
+F ++ L C P+ ITY ++ L R G ++ +MLN+ +S+ P ISY+
Sbjct: 188 LFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLND-SSLYGINFKPVVISYS 246
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ L K RR D F EM G+ P +++YT+LI F G EE+ RLFN+M Q
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQ 306
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P++ + LID L K GKV A + E M
Sbjct: 307 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 338
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C G A RL + ++ + PN +N ++ + + + +L+ ++
Sbjct: 284 IHGFCCGGKWEEAKRLFNEMVNQGV-QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG 342
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ Y + F + D +F+ + P+ +I +I + K+ ++E+A
Sbjct: 343 IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPD-VICYTVLINGYCKTSKVEEA 401
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +++ + + +PD+ TY +L L + G+V D F MK G+ D Y LN
Sbjct: 402 MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNG 461
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K L + F ++ IK D+ + LID + G +E + LF + Q++++P
Sbjct: 462 LCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPD 521
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +I + G+V A +F++M
Sbjct: 522 VVTYNIMIHEFCRGGQVVKANILFQKM 548
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 14/266 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G V A LL+ + + I +PN YN ++ D++ + ++L
Sbjct: 316 NVLIDVLCKEGKVIEAKDLLEVMIQRGI-VPNLLTYNSLIEGFCLVGDLNSA----RELF 370
Query: 61 VS--SRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
VS S+ D CYT + T + + ++Q+ + ++ +
Sbjct: 371 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 430
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ A +F +K DL Y I L+ L + G + + + F +K + D +
Sbjct: 431 GKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECF 490
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ L K +L+ F ++ + ++PD++TY +I F R G + ++ LF M++
Sbjct: 491 NCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEK 550
Query: 237 QQIRPSIYVYRSLIDNL---KKMGKV 259
P Y +LI KK+ KV
Sbjct: 551 NGCTPDKITYATLIRGFFESKKLEKV 576
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 111/249 (44%), Gaps = 7/249 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N IE C G++++A L S+ K P+ Y ++ +T+ ++ + ++ +L
Sbjct: 351 NSLIEGFCLVGDLNSARELFVSMPSKGC-EPDVICYTVLINGYCKTSKVEEAMKLYNGML 409
Query: 61 VSSRTLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ Y + L + +V I P + + + K+
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGI--PGDLYIYGIFLNGLCKNGC 467
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A+ +F+ +K K D+ +N ++D L + G++ F + + + PD ++YN
Sbjct: 468 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 527
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + ++ I F++M ++G PD +TY LI F + +E+ + L + M Q+
Sbjct: 528 MIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRD 587
Query: 239 IRPSIYVYR 247
+ + + R
Sbjct: 588 VSLDVNILR 596
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 134/282 (47%), Gaps = 17/282 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLL 60
N I+ K G + + RLL+ + + PN C ++ A N I+ ++ I+ +
Sbjct: 428 NTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 61 VSSRTLSSDCYTNFARAFI-MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + ARA+ + CT + I ++ ++ I+ + + ++
Sbjct: 488 SFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVL-------DILGRVGRVNDMLNEFASMKEAGVVPD 172
E+AL F +K L P+L +N ++ D+ G VG V D++ EF GV PD
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG-VGEVVDLMEEF------GVKPD 600
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++++TL+N + + C +R+M E GI PD+ ++ L + R G E++ ++ N
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 660
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
M++ +RP++ +Y +I G++ AM ++ +M S+
Sbjct: 661 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVG 702
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 44/259 (16%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ I L+ S YT A LL I +V + I+ N II
Sbjct: 338 AHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIIN 397
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG------------------- 152
A ++S +++A+ IF+ +K CKP T+N ++ G++G
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQ 457
Query: 153 -----------------RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL-- 193
++ + N M+ GV PD +++NTL +I C
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIG--STCTAE 515
Query: 194 -IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID- 251
+ M + +KP++ T +++ + G +EE+LR F MK+ + P+++V+ SLI
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 252 --NLKKMGKVDLAMTIFEE 268
N+ M V + + EE
Sbjct: 576 FLNINDMDGVGEVVDLMEE 594
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A IF+ + KP +ITY ++ L R + +L+ + +++ G+ PD I +N +
Sbjct: 336 QEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAI 395
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQ 238
+N + LD + F +M ESG KP T+ LI +G+ G +EES RL M + +
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEM 455
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++P+ L+ K++ A I +M S
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 67/118 (56%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GR + + F ++ E G P I+Y TL+ L + + L ++ ++G++PD + +
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILF 392
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
A+I++ +GN+++++++F MK+ +P+ + +LI K+GK++ + + E M
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMM 450
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S L+N L + R F + E G KP ++TYT L+ + R + L L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLI 377
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +++ +RP ++ ++I+ + G +D AM IFE+M S
Sbjct: 378 SKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
>gi|242039157|ref|XP_002466973.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
gi|241920827|gb|EER93971.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
Length = 504
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 142/283 (50%), Gaps = 21/283 (7%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDL 59
M N ++ + G V A RL + + DK + + + ++ ++ AS + L ++++
Sbjct: 181 MYNLVMKVFAECGEVKAMWRLFEEMMDKGLPVSSRTFHLLICASGKAG---LRRRLVEGF 237
Query: 60 LVSSRTLSSDCYTNFARAF------IMTDDCTQLLIFIEE--VVQIASPESII--VVNRI 109
+ SS T + Y F AF ++T + L+ ++ E +++ SP+ + VV R
Sbjct: 238 IKSS-TFN---YRPFRNAFNAILHTLLTIEQYSLIEWVHEKMILEGYSPDVLTYNVVMRA 293
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
+ K Q + L D + PDL TYN++L +LG+ + LN M + G
Sbjct: 294 KYMLGKLDQFHRLL---DEMGRDGLTPDLHTYNLLLHVLGKGDKPLAALNLLNYMSDVGC 350
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
VP+ + + L++ L + L+ C +F EM + G PD++ YT +I S+ G EE+ R
Sbjct: 351 VPNVLHFTNLIDGLGRAGNLEACKYFFDEMIKKGCDPDVVCYTVMISSYVAAGEFEEAQR 410
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F+DM + P++Y Y S+I L +G+ D A + ++M+S
Sbjct: 411 FFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAFAMLKDMDSH 453
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 108/265 (40%), Gaps = 4/265 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIF----LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+C +G RL++ + F NA+N +L L + + +++
Sbjct: 221 ICASGKAGLRRRLVEGFIKSSTFNYRPFRNAFNAILHTLLTIEQYSLIEWVHEKMILEGY 280
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y RA M Q ++E+ + + N ++ K + AL
Sbjct: 281 SPDVLTYNVVMRAKYMLGKLDQFHRLLDEMGRDGLTPDLHTYNLLLHVLGKGDKPLAALN 340
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ +++ + C P+++ + ++D LGR G + F M + G PD + Y ++++
Sbjct: 341 LLNYMSDVGCVPNVLHFTNLIDGLGRAGNLEACKYFFDEMIKKGCDPDVVCYTVMISSYV 400
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ +F +M G P++ TY ++I G +++ + DM P+
Sbjct: 401 AAGEFEEAQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAFAMLKDMDSHGCTPNFS 460
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SL+ L+ GK A + + M
Sbjct: 461 VYSSLVSRLRSAGKDTQANNVIKYM 485
>gi|255577348|ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530966|gb|EEF32823.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 140/277 (50%), Gaps = 6/277 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N I LCK A +L + + +LP+ Y ++ A + D+D + +I++ +L
Sbjct: 350 NSIIHGLCKERGCMRAYQLFEEGIEFG-YLPSEYTYKVLVEALCQEMDLDKARRIVEAML 408
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + RA +T+ T+LL + ++Q +I +N ++ F K +IE
Sbjct: 409 NKDGVDRTRIYNIYLRALCLTNSATELLNVLVSMLQTECQPDVITLNTVVNGFCKMHRIE 468
Query: 121 KALLIF-DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGVVPDFISYNT 178
+AL I D G C PD +T+ ++ L GR + LN + M E G+ P +YN
Sbjct: 469 EALTILTDMTMGKFCAPDAVTFTTIIAGLLNAGRSQEALNLLYKVMHEKGISPGVETYNA 528
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K++ + + F+ M +G+ D TYT +ID +G I+++ +L++D+
Sbjct: 529 VIHGLFKLQLAEEAMRAFKRMLAAGVAADSKTYTLIIDGLCESGLIDKAKKLWDDVIWPS 588
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMT-IFEEMNSSLS 274
+VY S++ L + GK+D A ++E ++S +S
Sbjct: 589 RIHDDFVYASILKGLCRAGKLDEACHFLYELVDSGVS 625
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 117/268 (43%), Gaps = 5/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+AG A R++ ++ K + P+ +YN ++ + ++Q+ ++ +
Sbjct: 318 IDSLCRAGKNHGASRIVYMMKKKGL-TPSLVSYNSIIHGLCKERGCMRAYQLFEEGIEFG 376
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S Y A D + +E ++ + + N + A + + L
Sbjct: 377 YLPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVDRTRIYNIYLRALCLTNSATELL 436
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG-VVPDFISYNTLLNN 182
+ + +C+PD+IT N V++ ++ R+ + L M PD +++ T++
Sbjct: 437 NVLVSMLQTECQPDVITLNTVVNGFCKMHRIEEALTILTDMTMGKFCAPDAVTFTTIIAG 496
Query: 183 LRKIRRLDLCL-IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R L + ++ M E GI P + TY A+I + EE++R F M +
Sbjct: 497 LLNAGRSQEALNLLYKVMHEKGISPGVETYNAVIHGLFKLQLAEEAMRAFKRMLAAGVAA 556
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +ID L + G +D A +++++
Sbjct: 557 DSKTYTLIIDGLCESGLIDKAKKLWDDV 584
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 47/211 (22%)
Query: 102 SIIVVNRIIFAFAKSRQIEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
S+I NR I+ + Q + A L+FD I C P+++T+ +L RVG V +
Sbjct: 164 SLINYNRFIYQCCEFSQPDVAHRLLFDMISRGHC-PNVVTFTSLLTGYCRVGEVGNAYKL 222
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLD------------------------------ 190
F M+E VVP+ ++Y+ L+ L +R+ D
Sbjct: 223 FDEMRECSVVPNSLTYSVLIRGL--LRQGDFEHGRELMCNLWETMKDEEKNQSVNAAAFV 280
Query: 191 -----LCLIYF--------REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LC F +M + Y +IDS R G + R+ MK++
Sbjct: 281 NVIDSLCREGFLNDVFKIAEDMPQGKSVNQEFAYAHMIDSLCRAGKNHGASRIVYMMKKK 340
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ PS+ Y S+I L K A +FEE
Sbjct: 341 GLTPSLVSYNSIIHGLCKERGCMRAYQLFEE 371
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 82/205 (40%), Gaps = 37/205 (18%)
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
+I + R++++AL + DH++ +PD + ++ ++ L R + + F +
Sbjct: 63 KIHLLCTQQRKVDEALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKEAHHRFLLCIAS 122
Query: 168 GVVPD-------------------------------------FISYNTLLNNLRKIRRLD 190
VPD I+YN + + + D
Sbjct: 123 DCVPDERTCNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFSQPD 182
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ +M G P+++T+T+L+ + R G + + +LF++M++ + P+ Y LI
Sbjct: 183 VAHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLI 242
Query: 251 DNLKKMGKVDLAMTIFEEMNSSLSD 275
L + G + + + ++ D
Sbjct: 243 RGLLRQGDFEHGRELMCNLWETMKD 267
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 113/300 (37%), Gaps = 71/300 (23%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
C+ G V A +L +R+ ++ +PN+ Y+ ++ D + +++ +L + +
Sbjct: 211 CRVGEVGNAYKLFDEMRECSV-VPNSLTYSVLIRGLLRQGDFEHGRELMCNLWETMKDEE 269
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS--PESIIVVNRIIFAFAKSRQIEKALLI 125
+ N A AF+ D F+ +V +IA P+ V FA+A
Sbjct: 270 KNQSVN-AAAFVNVIDSLCREGFLNDVFKIAEDMPQGKSVNQE--FAYAH---------- 316
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++D L R G+ + MK+ G+ P +SYN++++ L K
Sbjct: 317 ------------------MIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGLCK 358
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR------------------------- 220
R F E E G P TY L+++ +
Sbjct: 359 ERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVDRTRI 418
Query: 221 ----------TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
T + E L + M Q + +P + ++++ KM +++ A+TI +M
Sbjct: 419 YNIYLRALCLTNSATELLNVLVSMLQTECQPDVITLNTVVNGFCKMHRIEEALTILTDMT 478
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 118/233 (50%)
Query: 39 VLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIA 98
+L+A A+ N + + + L + + +T F + L + +++++
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SI+ ++ F + +A+ + D I GL +P+++ YN ++D L G+VN L
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ MK+ G+ PD ++YN+L+ L + +M GI PD++T++ALID +
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G+ G + E+ + +N+M Q+ + P+I Y SLI+ L G +D A + + S
Sbjct: 265 GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ +R++ A AK + E + +F H++ L DL ++ ++D R R++ L+
Sbjct: 78 SIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCL 137
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P +++ +L+N + R + ++ G +P+++ Y +IDS
Sbjct: 138 GKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEK 197
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G + +L + MK+ IRP + Y SLI L G ++ I +M
Sbjct: 198 GQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 98/200 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + F + + + ++++V + ++++ N II + + Q+ AL + H+K
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ +PD++TYN ++ L G + M G+ PD I+++ L++ K +L
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ EM + + P+++TY +LI+ G ++E+ ++ N + + P+ Y +LI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
+ K +VD M I M+
Sbjct: 332 NGYCKAKRVDDGMKILCVMS 351
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 116/272 (42%), Gaps = 38/272 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC+ G V+ A+ +L+ ++ I P+ YN ++ + +S +IL D++
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGI-RPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R I SP+ +I + +I + K Q+
Sbjct: 247 ---------------RMGI-------------------SPD-VITFSALIDVYGKEGQLL 271
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++ + P+++TYN +++ L G +++ + G P+ ++YNTL+
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K +R+D + M G+ D TY L + + G + ++ M +
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P +Y + L+D L GK+ A+ E++ S
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 73/134 (54%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P ++ ++ +L + ++ + +++ F ++ G+ D S+ TL++ + RL L L
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+M + G +P ++T+ +L++ F E++ L + + P++ +Y ++ID+L +
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 256 MGKVDLAMTIFEEM 269
G+V+ A+ + + M
Sbjct: 197 KGQVNTALDVLKHM 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 38/237 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC G + A ++L L K F PNA YN ++ + +D +IL +
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKG-FFPNAVTYNTLINGYCKAKRVDDGMKIL--CV 349
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S + D +T N + + ++ +
Sbjct: 350 MSRDGVDGDTFT---------------------------------YNTLYQGYCQAGKFS 376
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + + PD+ T+NI+LD L G++ L ++++ V I+YN ++
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L K +++ F + G+ PD++TY ++ R E+ L+ M+++
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 68/152 (44%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N +I + K+++++ + I + D TYN + + G+ +
Sbjct: 325 VTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGR 384
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M GV PD ++N LL+ L ++ L+ ++ +S ++TY +I +
Sbjct: 385 MVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+E++ LF + + + P + Y +++ L++
Sbjct: 445 VEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 102/182 (56%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+ +++++ I +I F +IE+A+ + + + + KPD++ Y ++D L
Sbjct: 128 FLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLC 187
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G V++ L+ F M+ G+ PD + Y +L+N L R + R M + IKPD++
Sbjct: 188 KNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVI 247
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+ ALID+F + G + ++ L+N+M Q I P+I+ Y SLI+ L G++D A +F M
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307
Query: 270 NS 271
+
Sbjct: 308 ET 309
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+I N +I AF K ++ A +++ + + P++ TY +++ L GR+++ F
Sbjct: 246 VITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY 305
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+ G PD ++Y +L+N K ++++ + F EM + G+ + +TYT LI FG G
Sbjct: 306 LMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVG 365
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
+ +F M + + P+I Y L+ L GKV+ A+ IFE+M D P
Sbjct: 366 KPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPP 422
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 103/201 (51%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T+ F + + + + + ++V++ +++ II + K+ ++ AL +F+ ++
Sbjct: 144 FTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQME 203
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+PD++ Y +++ L GR D M + + PD I++N L++ K +L
Sbjct: 204 NYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLL 263
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ EM + I P++ TYT+LI+ G ++E+ ++F M+ + P + Y SLI
Sbjct: 264 DAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLI 323
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ K KV+ AM IF EM+
Sbjct: 324 NGFCKCKKVEDAMKIFYEMSQ 344
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 127/274 (46%), Gaps = 16/274 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDLL 60
I+ LCK G+V A+ L + + I P+ Y + L S D DL +L+ ++
Sbjct: 183 IDSLCKNGHVDNALSLFNQMENYGI-RPDVVMYTSLVNGLCNSGRWRDADL---LLRGMM 238
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R + D T A AF+ E++Q++ +I +I +
Sbjct: 239 --KRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGR 296
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F ++ C PD++ Y +++ + +V D + F M + G+ + I+Y T
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTT 356
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + + ++ F M G+ P++ TY L+ G + ++L +F DM++++
Sbjct: 357 LIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKRE 416
Query: 239 I---RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P+I Y L+ L GK++ A+ +F +M
Sbjct: 417 IDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDM 450
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 88/155 (56%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
S Q +AL +F H+ + P +I + +L+++ ++ + + ++N ++ GV D
Sbjct: 48 HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLY 107
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ N L+N + + L + ++ + G +PD+ T+T+LI+ F IEE++ + N M
Sbjct: 108 TCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQM 167
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I+P + +Y ++ID+L K G VD A+++F +M
Sbjct: 168 VEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQM 202
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 51 LSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
LSF L L R + Y R + + + L +V+ SII R++
Sbjct: 21 LSFSRLLGLSFWVRAFCN--YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLL 78
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
AK ++ + + + H++ + DL T N++++ + + + + + G
Sbjct: 79 NVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFE 138
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++ +L+N R++ + +M E GIKPD++ YT +IDS + G+++ +L L
Sbjct: 139 PDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSL 198
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
FN M+ IRP + +Y SL++ L G+
Sbjct: 199 FNQMENYGIRPDVVMYTSLVNGLCNSGR 226
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 3/202 (1%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT+ F + E+ Q + I +I F + A +F H+
Sbjct: 319 YTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMV 378
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA---GVVPDFISYNTLLNNLRKIR 187
P++ TYN++L L G+VN L F M++ GV P+ +YN LL+ L
Sbjct: 379 SRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNG 438
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+L+ L+ F +M + + ++TYT +I + G ++++L LF + + ++P++ Y
Sbjct: 439 KLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYT 498
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
++I L + G + A +F +M
Sbjct: 499 TMISGLFREGLMLEAHVLFRKM 520
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 6/239 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G + A ++ + K F P+ AY ++ + ++ + +I ++
Sbjct: 288 INGLCMEGRLDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T ++ YT + F + +V P +I N ++ + ++ KAL
Sbjct: 347 LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKAL 406
Query: 124 LIFDHIKGLK---CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+IF+ ++ + P++ TYN++L L G++ L F M++ + I+Y ++
Sbjct: 407 MIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIII 466
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ K ++ L F + G+KP+++TYT +I R G + E+ LF MK+ +
Sbjct: 467 QGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 5/226 (2%)
Query: 48 DIDLSFQILKDLLVSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQ-IASPESII 104
+I++ Q K R DC Y R ++ I+EVV+ S
Sbjct: 105 EINVKIQFFK-WAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPA 163
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V++ ++ A +++ + KAL +F KG KCKP TYN V+ +L + G+ + + M
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 165 -KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
E PD I+Y+ L+++ K+ R D + F EM ++ ++P YT L+ + + G
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++L LF +MK+ P++Y Y LI L K G+VD A +++M
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 4/262 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G V A+ L + ++ P Y ++ + +D ++ KD+L T
Sbjct: 280 KVGKVEKALDLFEEMKRAGC-SPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV 338
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR-QIEKALLIFD 127
N +L E+ +++ N +I A +S+ + + FD
Sbjct: 339 VFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFD 398
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K P TY+I++D + RV L M E G P +Y +L+N L K +
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R + F+E+ E+ Y +I FG+ G + E++ LFN+MK Q P +Y Y
Sbjct: 459 RYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+L+ + K G ++ A ++ +M
Sbjct: 519 ALMSGMVKAGMINEANSLLRKM 540
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 4/180 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I + +I ++ K + + A+ +FD +K +P Y +L I +VG+V L+ F
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK AG P +Y L+ L K R+D ++++M G+ PD++ L++ G+ G
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+EE +F++M + P++ Y ++I L + V + F++M +D P +F
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK---ADSVSPSEF 410
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 109/239 (45%), Gaps = 7/239 (2%)
Query: 35 AYNCVLVA----SAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
+YN V+ A A +++ F +K VS + Y+ + T+ + L+
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT---YSILIDGYCKTNRVEKALLL 431
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+EE+ + P +I A K+++ E A +F +K Y +++ G+
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G++++ ++ F MK G PD +YN L++ + K ++ R+M E+G + D+ +
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINS 551
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++ F RTG ++ +F +K I+P Y +L+ G + A + EM
Sbjct: 552 HNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK V A+ LL+ + +K P AY ++ A + + + ++ K+L +
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+SS Y + F ++ + E+ S + N ++ K+ I +A
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ ++ C+ D+ ++NI+L+ R G + F ++K +G+ PD ++YNTLL
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ REM + G + D +TY++++D+ G + ++ + F
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 100/167 (59%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V + ++ + ++ A +F + + PD+ Y+I+++ L ++ RV++ LN F
Sbjct: 303 VVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFE 362
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ + +VPD ++Y +L++ L K R+ F EM + G PD++TY LID+ + G
Sbjct: 363 EIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNG 422
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ ++ LFN MK Q IRP++Y + L+D L K+G++ A+ F+++
Sbjct: 423 HLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDL 469
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 131/274 (47%), Gaps = 5/274 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+ C G ++ A+ LL + +NI P+ Y ++ A + + + +L ++ +
Sbjct: 240 VSGFCIVGQLNRAIDLLNEMVLENIN-PDIYTYTILVDALCKEGKVKEAENVLAVMVKAC 298
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L Y+ + + ++ + Q+ + + +I K +++++AL
Sbjct: 299 VNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEAL 358
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ I PD +TY ++D L + GR++ + + F M + G PD I+YN L++ L
Sbjct: 359 NLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDAL 418
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K LD + F +M + I+P++ T+T L+D + G ++ +L F D+ + ++
Sbjct: 419 CKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNV 478
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
Y +I+ L K G +D A+ + M N +SD
Sbjct: 479 RTYTVMINGLCKEGLLDEALALQSRMEDNGCISD 512
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 98/208 (47%), Gaps = 7/208 (3%)
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
+C+ +F + + + +++++ + I +N ++ ++++AL D
Sbjct: 101 NCFCHFGQVVLAFSG-------VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDK 153
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ + I+Y I+++ + ++G + ++ + P+ + Y+ +++ L K
Sbjct: 154 VLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTL 213
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+D + EM GI PD++TY+ L+ F G + ++ L N+M + I P IY Y
Sbjct: 214 VDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTI 273
Query: 249 LIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
L+D L K GKV A + M + +L
Sbjct: 274 LVDALCKEGKVKEAENVLAVMVKACVNL 301
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K + A+ + I+ +P+++ Y++++D L + V++ + + M G
Sbjct: 169 LINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKG 228
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE-- 226
+ PD ++Y+ L++ + +L+ + EM I PD+ TYT L+D+ + G ++E
Sbjct: 229 ISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAE 288
Query: 227 ---------------------------------SLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+ R+F M Q + P ++ Y +I+ L
Sbjct: 289 NVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGL 348
Query: 254 KKMGKVDLAMTIFEEMNS 271
K+ +VD A+ +FEE++
Sbjct: 349 CKIKRVDEALNLFEEIHQ 366
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 82/163 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N+I+ + ++ A+ ++ ++ + +PD T NI+++ G+V + + + +
Sbjct: 62 NKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILK 121
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G P+ I+ NTL+ L ++ L + ++ G + ++Y LI+ + G
Sbjct: 122 LGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRA 181
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++RL +++ IRP++ +Y +ID L K VD A ++ EM
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEM 224
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
+N II F Q+ A I L +P+ IT N ++ L G+V + L +
Sbjct: 96 LNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVL 155
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
G ISY L+N + KI + R + I+P+++ Y+ +ID + ++
Sbjct: 156 AQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVD 215
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+ L+ +M + I P + Y L+ +G+++ A+ + EM
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 42/309 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA----YN---CVLVASAETNDI------ 49
NG + LCKAGNV A+ L+ KN F A Y+ L A+ ND
Sbjct: 55 NGCLRGLCKAGNVDGALEFLREA--KNSFSLRASVSTYSILVAALTAAKRNNDALELLEQ 112
Query: 50 --DLSFQILKD---LLVSS---------------RTLSSDCYTNFARAFIMTDDCTQLLI 89
+ + KD L++ S R +S +C + AR + +
Sbjct: 113 MESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPD-ARIYDPVIEELSKTG 171
Query: 90 FIEEVVQIASPE------SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI 143
++E V+IA S++ N ++ F K+R++++ + +F + PD+ TYNI
Sbjct: 172 RVDEAVEIAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNI 231
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+ + L R G M + GV+PD +++N+L+N L + R + +EM G
Sbjct: 232 LFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRG 291
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
P+ +TYT L+ R +E + LF + +++ P++Y Y +++ L K G++D A
Sbjct: 292 CDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAH 351
Query: 264 TIFEEMNSS 272
+F M +S
Sbjct: 352 RLFGVMLAS 360
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 37/283 (13%)
Query: 29 NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
++ A+ + V +E ++ + ++LKD+ + TLS R + L
Sbjct: 12 QLWKKQAFPALAVKYSEQGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGAL 71
Query: 89 IFIEEVVQ------IASPESIIVV------------------------------NRIIFA 112
F+ E S SI+V + II +
Sbjct: 72 EFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQMESVGLEADKDTYSLIIHS 131
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
KS ++KA ++ + + C PD Y+ V++ L + GRV++ + E A +A
Sbjct: 132 LCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAV-EIAKEADAKHCTS 190
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++YN+L+ K RRL + F M +G PD+ TY L + R G + +L
Sbjct: 191 VVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLP 250
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
M Q + P + + SLI+ L + + A+T+ +EM S D
Sbjct: 251 RMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCD 293
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL---- 59
I LCK+G V A L++ + +N +P+A Y+ V+ ++T +D + +I K+
Sbjct: 129 IHSLCKSGMVDKAKVLVERMISRNC-VPDARIYDPVIEELSKTGRVDEAVEIAKEADAKH 187
Query: 60 -------------LVSSRTLSSD--CYTNFARAFIMTDDCTQLLIF-------------- 90
+ +R L +T AR D T ++F
Sbjct: 188 CTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYK 247
Query: 91 -IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ + Q ++ N +I + + +A+ + + C P+ ITY I+L L
Sbjct: 248 LLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLA 307
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG-IKPDL 208
R R ++ + F + + + P+ +YNT+++ L K RLD F M S P+
Sbjct: 308 RNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNA 367
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY ALI +E ++ L + M ++ P + Y +++ K G++D A + E
Sbjct: 368 ITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAFCKQGRIDEAFELLER 427
Query: 269 M 269
M
Sbjct: 428 M 428
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 40/184 (21%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ L + V L Q L D+ + PN YN V+ A + +D + ++ +L S
Sbjct: 303 LKWLARNARTDECVELFQRLLDRKL-APNVYTYNTVMSALCKAGRLDQAHRLFGVMLAS- 360
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
DCT P + I +I ++E+A+
Sbjct: 361 -------------------DCT--------------PPNAITYRALIHGLCLKMELERAV 387
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L+ D + C PD+ Y ++ + GR+++ M AG D + + TL+ L
Sbjct: 388 LLLDAMAKRGCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAG---DKVMFRTLVRAL 444
Query: 184 RKIR 187
K++
Sbjct: 445 CKLQ 448
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 126/270 (46%), Gaps = 7/270 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
C I+KLC +G + A R+L + + AYN ++ T +D + +++ D+ +
Sbjct: 97 CAALIKKLCASGRTAEARRVLAACEPDVM----AYNAMVAGYCVTGQLDAARRLVADMPM 152
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y R L+ ++++++ ++ ++ A K ++
Sbjct: 153 EPDSYT---YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 209
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + D ++ C PD+ITYN+V++ + + GRV+D + S+ G P+ +SYN +L
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R + EM + G P+++T+ LI R G +E ++ + + + + P
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ++ K K+D AM E M S
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVS 359
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 15/272 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +C+ G V A+ L+SL PN +YN VL + + +++ ++
Sbjct: 230 NVVVNGICQEGRVDDAIEFLKSLPSHGCE-PNTVSYNIVLKGLCTAERWEDAEKLMAEM- 287
Query: 61 VSSRTLSSDCYT-NFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFA 114
S + + T N +F+ C + L+ ++++ + + + N I+ AF
Sbjct: 288 -SQKGYPPNVVTFNMLISFL----CRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFC 342
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K +++++A+ + + C PD+++YN +L L R G V+ + +K+ G P I
Sbjct: 343 KQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLI 402
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYNT+++ L K + L EM G++PD++TY+ + R IEE++R F +
Sbjct: 403 SYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKV 462
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ IRP+ +Y +++ L K + A+ +F
Sbjct: 463 QDMGIRPNTVLYNAILLGLCKRRETHNAIDLF 494
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC A A +L+ + K + PN +N ++ ++ + ++L +
Sbjct: 268 LKGLCTAERWEDAEKLMAEMSQKG-YPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T +S Y AF + + F+E +V I+ N ++ A + +++ A+
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ +K C P LI+YN V+D L + G+ + L M G+ PD I+Y+T+ + L
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F ++ + GI+P+ + Y A++ + ++ LF M P+
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNE 506
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI+ L G V A + E+ S
Sbjct: 507 STYTILIEGLTYEGLVKEARELLGELCS 534
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC+ G V AAV LL L+DK + +YN V+ + + ++L +++
Sbjct: 370 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVT 429
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
Y+ + D + + +V + + ++ N I+ K R+
Sbjct: 430 KGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHN 489
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFAS 163
A+ +F ++ C P+ TY I+++ L G V ++L E S
Sbjct: 490 AIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCS 534
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 4/278 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
LCK G V AA L + L D+ +YN + + + ID + + ++ ++ S
Sbjct: 117 LCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSL 176
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESII----VVNRIIFAFAKSRQIEKALL 124
Y + Q + +EE+++ ++ N +I F K+RQ+ A
Sbjct: 177 LTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARY 236
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + C P+++T+N +LD L G++++ F M E P ++Y L+
Sbjct: 237 VLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHA 296
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ R+D YF +M G++P++ TYTALI +E++L + M P++
Sbjct: 297 RALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVV 356
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
Y +I L K G+++ A +F + S + P +
Sbjct: 357 TYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSY 394
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 38/210 (18%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++ N + A K KA IFD + +C P++ TY IVL L + + L
Sbjct: 35 HTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALEL 94
Query: 161 FASMKEAGVVP----------------------------------DFISYNTLLNNLRKI 186
M+ + P D ISYN L L K
Sbjct: 95 LQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKA 154
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM----KQQQIRPS 242
++D L F EM E+ + P LLTY L+ + R G +E+++ L +M K + P
Sbjct: 155 DQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPD 214
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y Y ++I K ++ A + M S
Sbjct: 215 MYSYNTVISGFCKARQLPTARYVLRRMIKS 244
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 6/193 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC G + A + + + ++N P A Y ++ A ID + D+L
Sbjct: 254 NTLLDGLCLTGKLDEANAMFEYMVERNC-EPTAVTYTVLITGHARALRIDKANDYFVDML 312
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT + L ++ + +++ R+I A K QIE
Sbjct: 313 RRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIE 372
Query: 121 KALLIFDHIKG---LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+A +F+ G KCKPD Y+ ++ L R + + F M E+ +V Y
Sbjct: 373 RATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYK 432
Query: 178 TLLNNLRKIRRLD 190
+ + L ++ +
Sbjct: 433 AMADGLELVQETE 445
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN LN L K F +M P++ TY ++ + +L L DM
Sbjct: 39 TYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM 98
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ + + P+ ++ L+ L K GKVD A +++ ++ S
Sbjct: 99 ESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECS 138
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ TY A +++ + G+ ++ ++F+DM ++ P+IY Y ++ L K D A+ + +
Sbjct: 37 VFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQ 96
Query: 268 EMNSSL 273
+M S +
Sbjct: 97 DMESKM 102
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 5/226 (2%)
Query: 48 DIDLSFQILKDLLVSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQ-IASPESII 104
+I++ Q K R DC Y R ++ I+EVV+ S
Sbjct: 105 EINVKIQFFK-WAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPA 163
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V++ ++ A +++ + KAL +F KG KCKP TYN V+ +L + G+ + + M
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 165 -KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
E PD I+Y+ L+++ K+ R D + F EM ++ ++P YT L+ + + G
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++L LF +MK+ P++Y Y LI L K G+VD A +++M
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 4/262 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G V A+ L + ++ P Y ++ + +D ++ KD+L T
Sbjct: 280 KVGKVEKALDLFEEMKRAGC-SPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV 338
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR-QIEKALLIFD 127
N +L E+ +++ N +I A +S+ + + FD
Sbjct: 339 VFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFD 398
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K P TY+I++D + RV L M E G P +Y +L+N L K +
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R + F+E+ E+ Y +I FG+ G + E++ LFN+MK Q P +Y Y
Sbjct: 459 RYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+L+ + K G ++ A ++ +M
Sbjct: 519 ALMSGMVKAGMINEANSLLRKM 540
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 4/180 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I + +I ++ K + + A+ +FD +K +P Y +L I +VG+V L+ F
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK AG P +Y L+ L K R+D ++++M G+ PD++ L++ G+ G
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+EE +F++M + P++ Y ++I L + V + F++M +D P +F
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK---ADSVSPSEF 410
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 109/239 (45%), Gaps = 7/239 (2%)
Query: 35 AYNCVLVA----SAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
+YN V+ A A +++ F +K VS + Y+ + T+ + L+
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT---YSILIDGYCKTNRVEKALLL 431
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+EE+ + P +I A K+++ E A +F +K Y +++ G+
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G++++ ++ F MK G PD +YN L++ + K ++ R+M E+G + D+ +
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINS 551
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++ F RTG ++ +F +K I+P Y +L+ G + A + EM
Sbjct: 552 HNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK V A+ LL+ + +K P AY ++ A + + + ++ K+L +
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFG 475
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+SS Y + F ++ + E+ S + N ++ K+ I +A
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ ++ C+ D+ ++NI+L+ R G + F ++K +G+ PD ++YNTLL
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ REM + G + D +TY++++D+ G + ++ + F
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + AA + + K PN +N ++ ID ++L ++ +
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F + D L ++E++ I+ + ++ + +++ AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 124 LIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+F ++ K +PD+ TYNI++ L G+ + + M G+VPD
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+Y+++++ L K RLD F MG P+++T+T LI+ + + G +++ L LF
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++ I + Y +LI +K+G ++ A+ IF+EM SS
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G S A L +++K IF P+ YN ++V + + Q+L+++L
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIF-PDLFTYNSMIVGFCSSGRWSDAEQLLQEML--E 318
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R +S D ++ N +I AF K + +A
Sbjct: 319 RKISPD---------------------------------VVTYNALINAFVKEGKFFEAE 345
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++D + P+ ITY+ ++D + R++ + F M G P+ I++NTL++
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+R+D + EM E+G+ D TY LI F G++ +L L +M + P I
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+L+D L GK+ A+ +F+ M S DL F
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + D ++ L F ++ + +++ ++ + +I +A+ + D +
Sbjct: 152 FTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRL 189
+P ITY ++D + + G LN M+E + ++P+ + Y+ ++++L K R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
F EM E GI PDL TY ++I F +G ++ +L +M +++I P + Y +L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I+ K GK A +++EM
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N +I F ++ AL F I L PD++T+ +L L RV++ L+ F
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E P+ +++ TL+N L + R+ + M E G++P +TY ++D + G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 223 NIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +L L M++ I P++ +Y ++ID+L K G+ A +F EM
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ ++ ++ ++ +AL F + C+P+++T+ +++ L R G
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE-SGIKPDLLTY 211
R+ + + M E G+ P I+Y T+++ + K L R+M E S I P+++ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+A+IDS + G ++ LF +M+++ I P ++ Y S+I G+ A + +EM
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD ITY+ ++D L + R+++ F SM P+ +++ TL+N K R+D L
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EMG GI + +TY LI F + GNI +L +F +M + P R+++ L
Sbjct: 604 FCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS 663
Query: 256 MGKVDLAMTIFEEMNSSL 273
++ A+ + E++ S+
Sbjct: 664 KEELKRAVAMLEKLQMSM 681
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K ++C D+ ++NI++ ++ L+ F + + G+ PD +++ TLL+ L R+
Sbjct: 108 KQIRC--DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L +F +M E+ +P+++T+T L++ R G I E++ L + M + ++P+ Y ++
Sbjct: 166 SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+D + K G A+ + +M
Sbjct: 226 VDGMCKKGDTVSALNLLRKM 245
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
EE+ I + +I K ++++A +FD + P+++T+ +++ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GRV+D L F M G+V + I+Y TL+ RK+ ++ L F+EM SG+ PD +T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 81/158 (51%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F + + +E A+ +F + + P ++ + ++ ++ R+ R + +++ + M+ +
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S+N L+ +L L F ++ + G+ PD++T+T L+ + E+L F
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + RP++ + +L++ L + G++ A+ + + M
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 4/278 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
LCK G V AA L + L D+ +YN + + + ID + + ++ ++ S
Sbjct: 117 LCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSL 176
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESII----VVNRIIFAFAKSRQIEKALL 124
Y + Q + +EE+++ ++ N +I F K+RQ+ A
Sbjct: 177 LTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARY 236
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + C P+++T+N +LD L G++++ F M E P ++Y L+
Sbjct: 237 VLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHA 296
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ R+D YF +M G++P++ TYTALI +E++L + M P++
Sbjct: 297 RALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVV 356
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
Y +I L K G+++ A +F + S + P +
Sbjct: 357 TYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSY 394
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 38/210 (18%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++ N + A K KA IFD + +C P++ TY IVL L + + L
Sbjct: 35 HTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALEL 94
Query: 161 FASMKEAGVVP----------------------------------DFISYNTLLNNLRKI 186
M+ + P D ISYN L L K
Sbjct: 95 LQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKA 154
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM----KQQQIRPS 242
++D L F EM E+ + P LLTY L+ + R G +E+++ L +M K + P
Sbjct: 155 DQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPD 214
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y Y ++I K ++ A + M S
Sbjct: 215 MYSYNTVISGFCKARQLPTARYVLRRMIKS 244
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 6/193 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC G + A + + + ++N P A Y ++ A ID + D+L
Sbjct: 254 NTLLDGLCLTGKLDEANAMFEYMVERNC-EPTAVTYTVLITGHARALRIDKANDYFVDML 312
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT + L ++ + +++ R+I A K QIE
Sbjct: 313 RRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIE 372
Query: 121 KALLIFDHIKG---LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+A +F+ G KCKPD Y+ ++ L R + + F M E+ +V Y
Sbjct: 373 RATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYK 432
Query: 178 TLLNNLRKIRRLD 190
+ + L ++ +
Sbjct: 433 AMADGLELVQETE 445
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN LN L K F +M P++ TY ++ + +L L DM
Sbjct: 39 TYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM 98
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ + + P+ ++ L+ L K GKVD A +++ ++ S
Sbjct: 99 ESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECS 138
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ TY A +++ + G+ ++ ++F+DM ++ P+IY Y ++ L K D A+ + +
Sbjct: 37 VFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQ 96
Query: 268 EMNSSL 273
+M S +
Sbjct: 97 DMESKM 102
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 108/198 (54%), Gaps = 6/198 (3%)
Query: 75 ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKC 134
AR F + C++LL +E+ + ++ NR+I A+ ++ + +A+ IF ++ C
Sbjct: 80 ARNF---EACSRLL---QEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGC 133
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
PD +TY ++D+ + G ++ ++ + M++AG PD +Y+ +++ L K ++ L
Sbjct: 134 SPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALK 193
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F EM E G P L+TY +ID ++GN +++L+NDM+ P Y +++ L
Sbjct: 194 LFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLG 253
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G + A +F EM +
Sbjct: 254 QIGHLQEAELMFNEMEQA 271
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 87/164 (53%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++R E + ++ C+P ++TYN ++ GR + + + F M+E G
Sbjct: 73 MIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEG 132
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K D + +++M ++G +PD TY+ +I G+ G + E+L
Sbjct: 133 CSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEAL 192
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+LF +M ++ PS+ Y +ID K G +AM ++ +M +
Sbjct: 193 KLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDA 236
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 86/163 (52%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ ++ +AL +F+ + P L+TYNI++D+ + G + + M++AG
Sbjct: 178 IIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAG 237
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L +I L + F EM ++G PD Y ++D +G+ N E +L
Sbjct: 238 FHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERAL 297
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M + P++ + SL+ + +M + DLA + E M +
Sbjct: 298 EWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKA 340
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 100 PESIIV---VNRIIFAFA------KSRQIEKALLIFDHIKGLKC-KPDLITYNIVLDILG 149
P++++ VNR + AF ++ AL FD K + K D+ TY ++ I+G
Sbjct: 19 PDTLVALSRVNRTLSAFHINEVLKHQKESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMG 78
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R M+ G P ++YN L++ + L + F +M E G PD +
Sbjct: 79 RARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRV 138
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY L+D + G + ++ ++ M+Q +P + Y +I L K GKV A+ +FEEM
Sbjct: 139 TYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEM 198
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 119/255 (46%), Gaps = 9/255 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLV-----ASAETNDIDLSFQILK 57
N I +A + A+R+ ++++ C LV A N +D+ +Q ++
Sbjct: 106 NRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDM-YQKMQ 164
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
T + Y+ ++ L EE+V+ S++ N II AKS
Sbjct: 165 QAGFQPDTFT---YSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSG 221
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
A+ +++ ++ PD +TY+I++++LG++G + + F M++AG VPD Y
Sbjct: 222 NYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYG 281
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ K R + L ++++M +SG+ P++ +L+ S+ R + + + MK
Sbjct: 282 VMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAW 341
Query: 238 QIRPSIYVYRSLIDN 252
+ P++ + L+ +
Sbjct: 342 GLVPTLQTHTILLSS 356
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ + + R + C +EM G +P ++TY LI ++GR +
Sbjct: 59 EQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFL 118
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++R+F M+++ P Y +L+D K G D AM ++++M +
Sbjct: 119 GEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQA 166
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 136/265 (51%), Gaps = 12/265 (4%)
Query: 14 NVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
++ +A R L S+ + PN YN ++ A ++ + ++ D+ + ++ Y
Sbjct: 132 SLPSARRFLSSMLRHGV-APNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTY 190
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPES-----IIVVNRIIFAFAKSRQIEKALLIF 126
AF + L E VV + E ++ N ++ K+ ++E A +F
Sbjct: 191 NTLVAAFCRAGE----LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVF 246
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D + PD+++YN +L +VG +++ L F+ M + G+VPD +++ +L++ K
Sbjct: 247 DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 306
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
L+ + +M E G++ + +T+TALID F + G ++++L +M++ I+PS+ Y
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+LI+ K+G++DLA + EM +
Sbjct: 367 NALINGYCKLGRMDLARELIREMEA 391
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 125/261 (47%), Gaps = 34/261 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I CKAGN+ AV L+ +R++ + + +++F L D
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMN----------------EVTFTALID------- 336
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
F + + D L+ +EE+ + S++ N +I + K +++ A +
Sbjct: 337 -------GFCKKGFLDD----ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ + KPD++TY+ ++ +VG ++ M + GV+PD I+Y++L+ L +
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 445
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+RL+ F M + G++PD TYT LID + GN+E++L L ++M ++ + P +
Sbjct: 446 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 505
Query: 246 YRSLIDNLKKMGKVDLAMTIF 266
Y LI+ L K + A +
Sbjct: 506 YSVLINGLSKSARTKEAHRLL 526
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 126/269 (46%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C+AG + A R++ +R++ PN +N ++ + ++ + ++ +++
Sbjct: 191 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 250
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + L E+ Q ++ +I A K+ +E
Sbjct: 251 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 310
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + ++ + + +T+ ++D + G ++D L M++ G+ P + YN L+
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 370
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K+ R+DL REM +KPD++TY+ +I + + GN++ + +L M ++ +
Sbjct: 371 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 430
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI L + +++ A +FE M
Sbjct: 431 PDAITYSSLIRGLCEEKRLNDACELFENM 459
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKAG + A ++ + + + P+ +YN +L + + S + ++
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGL-APDVVSYNTLLSGYCKVGCLHESLAVFSEM- 284
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R L D +T+ A + Q + + ++ + + + +I F K
Sbjct: 285 -TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ ALL + ++ +P ++ YN +++ ++GR++ M+ V PD ++Y+T
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K+ LD ++M + G+ PD +TY++LI + ++ LF +M Q
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P + Y +LID K G V+ A+++ +EM
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 108/274 (39%), Gaps = 18/274 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + A L++ + K + P+ Y+ ++ + ++D +FQ+ + +L
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRV-KPDVVTYSTIISGYCKVGNLDSAFQLNQKML 425
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ R E ++Q+ +I K +E
Sbjct: 426 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 485
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL + D + PD++TY+++++ L + R + + VPD I Y+ L+
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545
Query: 181 -----NNLRKIRRL--DLCLI--------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ + L C+ ++ M + K D Y+ LI R GN+
Sbjct: 546 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
++L M + P+ SL+ L + G V
Sbjct: 606 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 639
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 99/180 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F ++V +S+ N +I K + A +F +K + PD++TYN ++D G
Sbjct: 239 FFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYG 298
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ F MK+ G PD I+YN L+N K ++ + EM SG+KP+++
Sbjct: 299 KLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVV 358
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ LID+ + ++++++ DM++ + P+ + Y SLID K G + A+ + +EM
Sbjct: 359 TYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM 418
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 121/240 (50%), Gaps = 2/240 (0%)
Query: 32 LPNAYNC--VLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLI 89
P A +C L A+T DLS + +D++ + S Y D
Sbjct: 214 FPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKS 273
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++ Q+ I+ N +I + K ++++ +F+ +K + C+PD+ITYN +++
Sbjct: 274 LFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFC 333
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ ++ + MK +G+ P+ ++Y+TL++ L K L + + +M G+ P+
Sbjct: 334 KYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEF 393
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TYT+LID+ + G + ++L+L ++M Q Q+ ++ Y +L+D L K G++ A +F M
Sbjct: 394 TYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAM 453
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 116 SRQIEKALLIFDHIKGLK--CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
SR+I +F+ + + C P ++ + + +G + + F+ M V P
Sbjct: 158 SRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKA 217
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
S N L L K + DL +FR+M +GI + TY +I + G++ + LF+
Sbjct: 218 RSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQ 277
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
MKQ + P I Y SLID K+G +D + +FEEM
Sbjct: 278 MKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEM 313
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF-AS 163
V + + F + +E+A F + + P + N L L + G+ D+ N+F
Sbjct: 184 VFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGK-GDLSNKFFRD 242
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M AG+ +YN ++ + K + F +M + G+ PD++TY +LID +G+ G
Sbjct: 243 MVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGL 302
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ES LF +MK P + Y +LI+ K ++ A EM +S
Sbjct: 303 LDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNS 351
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +CK G++ A L ++ + P+ YN ++ + +D SF + +++
Sbjct: 256 NIMIGYMCKEGDMVTAKSLFHQMKQMGL-TPDIVTYNSLIDGYGKLGLLDESFCLFEEMK 314
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y F + + F+ E+ +++ + +I A K ++
Sbjct: 315 DVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQ 374
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ ++ + P+ TY ++D + G ++D L M + V + ++Y TLL
Sbjct: 375 QAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLL 434
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R+ FR M ++G+ P+L TYTAL+ + +E +L L ++K+++I+
Sbjct: 435 DGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIK 494
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + +Y ++I L K++ + EM +
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEECEFVMSEMKA 525
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK + A L +++ + PN Y+ ++ A + + + + + L D+
Sbjct: 326 NALINCFCKYEQMPKAFHFLHEMKNSGL-KPNVVTYSTLIDALCKEHMLQQAIKFLLDMR 384
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT+ A + L +E++Q+ +++ ++ K ++
Sbjct: 385 RVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMM 444
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + P+L TY ++ + RV + L +KE + PD + Y T++
Sbjct: 445 EAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTII 504
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L +L+ C EM GI+ + + YT +D++ +TG E+L L +M +
Sbjct: 505 WGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVE 564
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I + LID L K G V+ A+ F M
Sbjct: 565 VTIVTFCVLIDGLCKKGLVEEAIDYFARM 593
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G + + L + ++D P+ YN ++ + + +F L ++
Sbjct: 291 NSLIDGYGKLGLLDESFCLFEEMKDVGC-EPDVITYNALINCFCKYEQMPKAFHFLHEMK 349
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + Y+ A Q + F+ ++ ++ + +I A K+ +
Sbjct: 350 NSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLS 409
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + D + ++ +++TY +LD L + GR+ + + F +M +AGV P+ +Y L+
Sbjct: 410 DALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALV 469
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +R++ L +E+ E IKPDLL Y +I +EE + ++MK IR
Sbjct: 470 HGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIR 529
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +Y +D K GK A+ + +EM
Sbjct: 530 ANSVIYTIRMDAYFKTGKTVEALNLLQEM 558
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 114/253 (45%), Gaps = 3/253 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI-FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CKAG +S A++L + + F Y +L + + + + + ++ +
Sbjct: 399 IDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGV 458
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
T + YT I L ++E+ + +++ II+ ++E+
Sbjct: 459 TPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEF 518
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ +K + + + Y I +D + G+ + LN M + GV +++ L++ L
Sbjct: 519 VMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLC 578
Query: 185 KIRRLDLCLIYFREMGESGIKPD-LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + YF M + ++P+ + TALID + IE + +LF++M+ + + P
Sbjct: 579 KKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDK 638
Query: 244 YVYRSLID-NLKK 255
Y +LID NLK
Sbjct: 639 IAYTALIDGNLKH 651
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 119/268 (44%), Gaps = 4/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK + A++ L +R + PN Y ++ A+ + + + ++ ++L
Sbjct: 364 IDALCKEHMLQQAIKFLLDMRRVGL-SPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ 422
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + +++ ++ ++ K++++E AL
Sbjct: 423 VGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENAL 482
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ IK K KPDL+ Y ++ L ++ + + MK G+ + + Y ++
Sbjct: 483 ELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAY 542
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP-S 242
K + L +EM + G++ ++T+ LID + G +EE++ F M ++P +
Sbjct: 543 FKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNN 602
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ V +LID L K ++ A +F+EM
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQ 630
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
Y ++ N ++ ++ ++ +S YT A+ T + L ++E+
Sbjct: 500 YGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMC 559
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY-NIVLDILGRVGRV 154
+ +I+ +I K +E+A+ F + +P+ + ++D L + +
Sbjct: 560 DLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYI 619
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
F M++ +VPD I+Y L++ K + L M E G++ DL YT+L
Sbjct: 620 EAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSL 679
Query: 215 IDSFGRTGNIEESLRLF-NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + GN+ + R+F N+M + I P + L+ ++G +D A+ + +E+
Sbjct: 680 VWGLSQ-GNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDEL 734
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + AA + + K PN +N ++ ID ++L ++ +
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F + D L ++E++ I+ + ++ + +++ AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 124 LIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+F ++ K +PD+ TYNI++ L G+ + + M G+VPD
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+Y+++++ L K RLD F MG P+++T+T LI+ + + G +++ L LF
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++ I + Y +LI +K+G ++ A+ IF+EM SS
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G S A L +++K IF P+ YN ++V + + Q+L+++L
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIF-PDLFTYNSMIVGFCSSGRWSDAEQLLQEML--E 318
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R +S D ++ N +I AF K + +A
Sbjct: 319 RKISPD---------------------------------VVTYNALINAFVKEGKFFEAE 345
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++D + P+ ITY+ ++D + R++ + F M G P+ I++NTL++
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+R+D + EM E+G+ D TY LI F G++ +L L +M + P I
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+L+D L GK+ A+ +F+ M S DL F
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F ++ AL F I L PD++T+N +L L RV++ LN F M E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ +++ TL+N L + R+ + M E G++P +TY ++D + G+ +L
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 229 RLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
L M++ I P++ +Y ++ID+L K G+ A +F EM
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 97/200 (48%), Gaps = 1/200 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + D ++ L ++ + +++ ++ + +I +A+ + D +
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRL 189
+P ITY ++D + + G LN M+E + ++P+ + Y+ ++++L K R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
F EM E GI PDL TY ++I F +G ++ +L +M +++I P + Y +L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I+ K GK A +++EM
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ ++ N ++ ++ +AL +F + C+P+++T+ +++ L R G
Sbjct: 139 KITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE-SGIKPDLLTY 211
R+ + + M E G+ P I+Y T+++ + K L R+M E S I P+++ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+A+IDS + G ++ LF +M+++ I P ++ Y S+I G+ A + +EM
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD ITY+ ++D L + R+++ F SM P+ +++ TL+N K R+D L
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EMG GI + +TY LI F + GNI +L +F +M + P R+++ L
Sbjct: 604 FCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS 663
Query: 256 MGKVDLAMTIFEEMNSSL 273
++ A+ + E++ S+
Sbjct: 664 KEELKRAVAMLEKLQMSM 681
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K ++C D+ ++ I++ ++ L+ F + + G+ PD +++NTLL+ L R+
Sbjct: 108 KQIRC--DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRV 165
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L F +M E+ +P+++T+T L++ R G I E++ L + M + ++P+ Y ++
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+D + K G A+ + +M
Sbjct: 226 VDGMCKKGDTVSALNLLRKM 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
EE+ I + +I K ++++A +FD + P+++T+ +++ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GRV+D L F M G+V + I+Y TL+ RK+ ++ L F+EM SG+ PD +T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 80/158 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F + + +E A+ +F + + P ++ + ++ ++ R+ R + +++ + M+ +
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S+ L+ +L L F ++ + G+ PD++T+ L+ + E+L LF
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + RP++ + +L++ L + G++ A+ + + M
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + AA + + K PN +N ++ ID ++L ++ +
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F + D L ++E++ I+ + ++ + +++ AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 124 LIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+F ++ K +PD+ TYNI++ L G+ + + M G+VPD
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+Y+++++ L K RLD F MG P+++T+T LI+ + + G +++ L LF
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++ I + Y +LI +K+G ++ A+ IF+EM SS
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G S A L +++K IF P+ YN ++V + + Q+L+++L
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIF-PDLFTYNSMIVGFCSSGRWSDAEQLLQEML--E 318
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R +S D ++ N +I AF K + +A
Sbjct: 319 RKISPD---------------------------------VVTYNALINAFVKEGKFFEAE 345
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++D + P+ ITY+ ++D + R++ + F M G P+ I++NTL++
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+R+D + EM E+G+ D TY LI F G++ +L L +M + P I
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+L+D L GK+ A+ +F+ M S DL F
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N +I F ++ AL F I L PD++T+ +L L RV++ LN F
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E P+ +++ TL+N L + R+ + M E G++P +TY ++D + G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 223 NIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +L L M++ I P++ +Y ++ID+L K G+ A +F EM
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + D ++ L ++ + +++ ++ + +I +A+ + D +
Sbjct: 152 FTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRL 189
+P ITY ++D + + G LN M+E + ++P+ + Y+ ++++L K R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
F EM E GI PDL TY ++I F +G ++ +L +M +++I P + Y +L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I+ K GK A +++EM
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ ++ ++ ++ +AL +F + C+P+++T+ +++ L R G
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE-SGIKPDLLTY 211
R+ + + M E G+ P I+Y T+++ + K L R+M E S I P+++ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+A+IDS + G ++ LF +M+++ I P ++ Y S+I G+ A + +EM
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD ITY+ ++D L + R+++ F SM P+ +++ TL+N K R+D L
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EMG GI + +TY LI F + GNI +L +F +M + P R+++ L
Sbjct: 604 FCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS 663
Query: 256 MGKVDLAMTIFEEMNSSL 273
++ A+ + E++ S+
Sbjct: 664 KEELKRAVAMLEKLQMSM 681
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K ++C D+ ++NI++ ++ L+ F + + G+ PD +++ TLL+ L R+
Sbjct: 108 KQIRC--DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L F +M E+ +P+++T+T L++ R G I E++ L + M + ++P+ Y ++
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+D + K G A+ + +M
Sbjct: 226 VDGMCKKGDTVSALNLLRKM 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
EE+ I + +I K ++++A +FD + P+++T+ +++ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GRV+D L F M G+V + I+Y TL+ RK+ ++ L F+EM SG+ PD +T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 82/158 (51%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F + + +E A+ +F + + P ++ + ++ ++ R+ R + +++ + M+ +
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S+N L+ +L L F ++ + G+ PD++T+T L+ + E+L LF
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + RP++ + +L++ L + G++ A+ + + M
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + AA + + K PN +N ++ ID ++L ++ +
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F + D L ++E++ I+ + ++ + +++ AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 124 LIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+F ++ K +PD+ TYNI++ L G+ + + M G+VPD
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+Y+++++ L K RLD F MG P+++T+T LI+ + + G +++ L LF
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++ I + Y +LI +K+G ++ A+ IF+EM SS
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G S A L +++K IF P+ YN ++V + + Q+L+++L
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIF-PDLFTYNSMIVGFCSSGRWSDAEQLLQEML--E 318
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R +S D ++ N +I AF K + +A
Sbjct: 319 RKISPD---------------------------------VVTYNALINAFVKEGKFFEAE 345
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++D + P+ ITY+ ++D + R++ + F M G P+ I++NTL++
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+R+D + EM E+G+ D TY LI F G++ +L L +M + P I
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+L+D L GK+ A+ +F+ M S DL F
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F ++ AL F + L PD++T+N +L L RV++ LN F M E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ +++ TL+N L + R+ + M E G++P +TY ++D + G+ +L
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239
Query: 229 RLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
L M++ I P++ +Y ++ID+L K G+ A +F EM
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 97/200 (48%), Gaps = 1/200 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + D ++ L ++ + +++ ++ + +I +A+ + D +
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRL 189
+P ITY ++D + + G LN M+E + ++P+ + Y+ ++++L K R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
F EM E GI PDL TY ++I F +G ++ +L +M +++I P + Y +L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I+ K GK A +++EM
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ ++ +AL +F + C+P+++T+ +++ L R GR+ + +
Sbjct: 149 VVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE-SGIKPDLLTYTALIDSFGRT 221
M E G+ P I+Y T+++ + K L R+M E S I P+++ Y+A+IDS +
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++ LF +M+++ I P ++ Y S+I G+ A + +EM
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD ITY+ ++D L + R+++ F SM P+ +++ TL+N K R+D L
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EMG GI + +TY LI F + GNI +L +F +M + P R+++ L
Sbjct: 604 FCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS 663
Query: 256 MGKVDLAMTIFEEMNSSL 273
++ A+ + E++ S+
Sbjct: 664 KEELKRAVAMLEKLQMSM 681
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K ++C D+ ++ I++ ++ L+ F + + G+ PD +++NTLL+ L R+
Sbjct: 108 KQIRC--DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRV 165
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L F +M E+ +P+++T+T L++ R G I E++ L + M + ++P+ Y ++
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+D + K G A+ + +M
Sbjct: 226 VDGMCKKGDTVSALNLLRKM 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
EE+ I + +I K ++++A +FD + P+++T+ +++ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GRV+D L F M G+V + I+Y TL+ RK+ ++ L F+EM SG+ PD +T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 80/158 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F + + +E A+ +F + + P ++ + ++ ++ R+ R + +++ + M+ +
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S+ L+ +L L F ++ + G+ PD++T+ L+ + E+L LF
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + RP++ + +L++ L + G++ A+ + + M
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 142/271 (52%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G SAA++LL+ + D + PN YN ++ + + ++ +F + +++ S
Sbjct: 184 INGLCKVGQTSAALQLLRRV-DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV--S 240
Query: 64 RTLSSD--CYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ +S D Y F + D T L F + + + +P ++ N ++ F K R+
Sbjct: 241 KGISPDVVTYNALISGFCIVGKMKDATDL--FNKMIFENINP-NVYTFNILVDGFCKERR 297
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A + + KPD+ TYN ++D V VN + F ++ + GV P+ SY+
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ KI+++D + F+EM + I PD++TY +LID + G I +L+L ++M +
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y S++D L K +VD A+ + +M
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKM 448
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 35/255 (13%)
Query: 51 LSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
LSF +L +L + T + + Q L F ++VV + + + +I
Sbjct: 125 LSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLI 184
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K Q AL + + G +P+++ YN ++D + +V VN+ + ++ M G+
Sbjct: 185 NGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS 244
Query: 171 PDFISYNTLL-----------------------------------NNLRKIRRLDLCLIY 195
PD ++YN L+ + K RRL
Sbjct: 245 PDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNV 304
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
M + GIKPD+ TY +L+D + + ++ +FN + Q+ + P+I+ Y +I K
Sbjct: 305 LAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCK 364
Query: 256 MGKVDLAMTIFEEMN 270
+ KVD AM +F+EM+
Sbjct: 365 IKKVDEAMNLFKEMH 379
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 90/161 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K +++++A+ +F + PD++TYN ++D L ++G+++ L M + G
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V D I+YN++L+ L K ++D + +M + GI+PD+ TYT L+D + G +E++
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR 477
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F D+ + + +Y ++I G D ++ + +M
Sbjct: 478 IVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKM 518
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I K +I AL + D + D ITYN +LD L + +V+ +
Sbjct: 387 VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 446
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
MK+ G+ PD +Y TL++ L K RL+ I F ++ G D+ YTA+I F G
Sbjct: 447 KMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHG 506
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ESL L + M++ P+ Y +I +L + D A + EM
Sbjct: 507 LFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 100/234 (42%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +++ C V+ A + ++ + + PN +Y+ ++ + +D + + K++
Sbjct: 321 NSLMDRYCLVKEVNKAKHIFNTISQRGVN-PNIHSYSIMIHGFCKIKKVDEAMNLFKEMH 379
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y + + L ++E+ P I N I+ A K+ Q++
Sbjct: 380 CNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVD 439
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ + +K +PD+ TY ++D L + GR+ D F + G + D Y ++
Sbjct: 440 KAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMI 499
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
D L +M E+G P+ +TY +I S +++ +L +M
Sbjct: 500 QGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 82/170 (48%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI +I+ + KS + + ++ DL+ +I+++ ++G+ +
Sbjct: 71 SIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVL 130
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A + + G P+ I+ TL+ L ++ L + ++ G + ++Y LI+ +
Sbjct: 131 AKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKV 190
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G +L+L + + ++P++ +Y ++ID++ K+ V+ A ++ EM S
Sbjct: 191 GQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 240
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ +CK G+ A +L + + PN YN VL + + + ++L ++ +
Sbjct: 273 IDGICKEGHHEVANEILSRMPSYGLK-PNVVCYNTVLKGICSADRWEKAEELLTEMYQKN 331
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + F +++ +E++++ +I +I F K I++A+
Sbjct: 332 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 391
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ ++ CKP+ I+Y IVL L R D + M + G +P+ +++NT++N L
Sbjct: 392 MLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFL 451
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + ++M +G PDL++Y+ +ID G+ G EE+L L N M + I P++
Sbjct: 452 CKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNV 511
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y S+ L + G++D + +F+ + +
Sbjct: 512 ITYSSMAFALAREGRIDKVIQMFDNIQDA 540
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + + +P+ Y V+ + ID + +LK++
Sbjct: 343 VDFFCQNGLVDRVIELLEQMLEHGC-MPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCG 401
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + T+ + ++Q + + N II K +E+A+
Sbjct: 402 CKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAI 461
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ + L M G+ P+ I+Y+++ L
Sbjct: 462 ELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFAL 521
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R+D + F + ++ I+ D + Y A+I S + + ++ M P+
Sbjct: 522 AREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNE 581
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LI L G + A + E+ S
Sbjct: 582 STYTALIKGLASEGLLCEAQDLLSELCS 609
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 30/269 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
IE C++G S+A+R+L++L K L + NC LV +A + +D ++L+ L +
Sbjct: 158 IESACRSGGYSSALRVLEALHAKGSTL-DTGNCNLVINAICDQGCVDEGLEMLRKLPLFG 216
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + ++E+V++ A ++ Q
Sbjct: 217 CEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHE------------ALSQMAQ----- 259
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS-MKEAGVVPDFISYNTLLNN 182
H C PD+ Y ++D + + G +++ NE S M G+ P+ + YNT+L
Sbjct: 260 ----H----GCTPDIRMYATIIDGICKEGH-HEVANEILSRMPSYGLKPNVVCYNTVLKG 310
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ R + EM + D +T+ L+D F + G ++ + L M + P
Sbjct: 311 ICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPD 370
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ++I+ K G +D A+ + + M S
Sbjct: 371 VITYTTVINGFCKEGLIDEAVMLLKNMPS 399
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 115/286 (40%), Gaps = 22/286 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LC AG + AVR L + + + YN ++ ++ + + L ++
Sbjct: 59 IRSLCVAGRTADAVRALDAAGNAAGVV--DYNAMVAGYCRVGQVEAARR-----LAAAVP 111
Query: 66 LSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + YT F R L ++E+ + + + II + +S AL
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + D N+V++ + G V++ L + G D +SYN +L L
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231
Query: 184 RKIRRL--------DLCLIY--FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+R ++ ++ +M + G PD+ Y +ID + G+ E + + +
Sbjct: 232 CAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSR 291
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM---NSSLSDL 276
M ++P++ Y +++ + + + A + EM N L D+
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDV 337
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKA + A ++ + + K +P+ Y ++ ++ + +D + ++L +L
Sbjct: 185 IDGLCKAQMLPDACKVFEQMVQKGC-VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 243
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + F D + I ++ + + + ++ + + E+A
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 303
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PD+I Y ++D+L GRV + + F SM E G PD ++Y T++ N
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
KI ++ M +SG+ PD Y +L+D + + ++++ +++ M I+P+
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 423
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L+ L K GK D A ++F+EM
Sbjct: 424 VTFNVLMHGLFKDGKTDRAFSLFKEM 449
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ E + +P+ I+ + I F+ R + +A +FD + C PD +TY ++
Sbjct: 305 VLTEMTARGCAPDVILYTSLIDLLFSTGR-VPEARHVFDSMIEKGCAPDALTYGTIIQNF 363
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
++G V M ++GV PD +YN+L++ K+ R+D + M SGIKP+
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 423
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+T+ L+ + G + + LF +M +++++ P++ Y LID L K G+V A F+
Sbjct: 424 VTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQ 483
Query: 268 EM 269
EM
Sbjct: 484 EM 485
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+I +I A S++I++A +F+ +K C P+++ Y V+D L + GR+ D L F
Sbjct: 108 VISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 167
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + VP +Y +++ L K + L D C + F +M + G PD +TYT LID F +
Sbjct: 168 EMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV-FEQMVQKGCVPDTITYTTLIDGFSKA 226
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E+ +L + M + P+ Y S++ K+ ++ A + +M
Sbjct: 227 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 274
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLL-QSLRD--KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
I CKAG +LL Q+L+ ++FL Y V+ + D+D + +
Sbjct: 49 IHGFCKAGQPQVGHKLLNQALKRFRPDVFL---YTSVIHGYCKAGDLDTGYF---RAVTP 102
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+L YT + + + EE+ +++ +I K+ +IE
Sbjct: 103 KASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDG 162
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L F+ + G C P TY +V+D L + + D F M + G VPD I+Y TL++
Sbjct: 163 LKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDG 222
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K ++D M G +P +TY +++ F + I E+ + M+++ P
Sbjct: 223 FSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPG 282
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++++ SL+ G+ + A + EM +
Sbjct: 283 LFIFTSLLSYYLSKGRAEEAYQVLTEMTA 311
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ + K ++++A ++D + KP+ +T+N+++ L + G+ + + F M E
Sbjct: 392 NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 451
Query: 167 -AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
V P +SY L++ L K R+ + F+EM + GI P+ TYT+LI S + G I
Sbjct: 452 KEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIP 511
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+ +L DM + + P + Y +LI L VD A +F+EM
Sbjct: 512 EAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 555
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 125/271 (46%), Gaps = 12/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKN----IFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
+ CK ++ A ++ +R++ +F+ + +L + ++Q+L ++
Sbjct: 255 VHGFCKLDMINEAKEVIAQMRERGCEPGLFI---FTSLLSYYLSKGRAEEAYQVLTEM-- 309
Query: 62 SSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++R + D YT+ T + + +++ + II F+K +
Sbjct: 310 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 369
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E A I + + PD YN ++D ++ RV+ + M +G+ P+ +++N L
Sbjct: 370 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 429
Query: 180 LNNLRKIRRLDLCLIYFREMGE-SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L K + D F+EM E + P L++YT LID G+ G + E+ F +M +
Sbjct: 430 MHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRG 489
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P + Y SLI +L K G++ A + E+M
Sbjct: 490 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 520
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV-NRIIFAFAKSRQIEKALLIFDHIKG 131
F++A M D+ +LL +V+ PE V I+ F K I +A + ++
Sbjct: 222 GFSKASKM-DEARKLL----DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 276
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
C+P L + +L GR + M G PD I Y +L++ L R+
Sbjct: 277 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 336
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
F M E G PD LTY +I +F + GN+E + + M + + P + Y SL+D
Sbjct: 337 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 396
Query: 252 NLKKMGKVDLAMTIFEEMNSS 272
K+ +VD A +++ M +S
Sbjct: 397 GYVKLERVDQAFGVYDRMVAS 417
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 125/259 (48%), Gaps = 8/259 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L G V A + S+ +K P+A Y ++ ++ +++ + +IL+ L++
Sbjct: 325 IDLLFSTGRVPEARHVFDSMIEKGC-APDALTYGTIIQNFSKIGNVEAAGEILE--LMAK 381
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ DC Y + ++ + Q + +V + + N ++ K + ++
Sbjct: 382 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 441
Query: 122 ALLIF-DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + ++ + P L++Y I++D LG+ GRV++ +F M + G++P+ +Y +L+
Sbjct: 442 AFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLI 501
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+L K R+ +M + G+ PD+ Y+ALI + ++ + +F +M ++
Sbjct: 502 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 561
Query: 241 PSIYVYRSLIDNLKKMGKV 259
P+ Y+ L + G+
Sbjct: 562 PNEVTYKVLRRGFRAAGRA 580
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK------ 185
+ C+P +++YN V+ L + ++++ F SM + G PD I++ TL++ K
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 186 --------IRRL------------------DLCLIYFREMGESGIKPDLLTYTALIDSFG 219
++R DL YFR + D+++YT +I
Sbjct: 61 GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKA-SLDVISYTTVIKGLA 119
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ I+E+ LF ++K P++ Y ++ID L K G+++ + FEEM+ S
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGS 172
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + AA + + K PN +N ++ ID ++L ++ +
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F + D L ++E++ I+ + ++ + +++ AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 124 LIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+F ++ K +PD+ TYNI++ L G+ + + M G+VPD
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+Y+++++ L K RLD F MG P+++T+T LI+ + + G +++ L LF
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++ I + Y +LI +K+G ++ A+ IF+EM SS
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 38/279 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G S A L +++K IF P+ YN ++V + + Q+L+++L
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIF-PDLFTYNSMIVGFCSSGRWSDAEQLLQEML--E 318
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R +S D ++ N +I AF K + +A
Sbjct: 319 RKISPD---------------------------------VVTYNALINAFVKEGKFFEAE 345
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++D + P+ ITY+ ++D + R++ + F M G P+ I++NTL++
Sbjct: 346 ELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGY 405
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+R+D + EM E+G+ D TY LI F G++ +L L +M + P I
Sbjct: 406 CGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+L+D L GK+ A+ +F+ M S DL F
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F ++ AL F I L PD++T+N +L L RV++ LN F M E
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ +++ TL+N L + R+ + M E G++P +TY ++D + G+ +L
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239
Query: 229 RLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
L M++ I P++ +Y ++ID+L K G+ A +F EM
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ ++ N ++ ++ +AL +F + C+P+++T+ +++ L R G
Sbjct: 139 KITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE-SGIKPDLLTY 211
R+ + + M E G+ P I+Y T+++ + KI L R+M E S I P+++ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIY 258
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+A+IDS + G ++ LF +M+++ I P ++ Y S+I G+ A + +EM
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + D ++ L ++ + +++ ++ + +I +A+ + D +
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRL 189
+P ITY ++D + ++G L+ M+E + ++P+ + Y+ ++++L K R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRH 271
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
F EM E GI PDL TY ++I F +G ++ +L +M +++I P + Y +L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I+ K GK A +++EM
Sbjct: 332 INAFVKEGKFFEAEELYDEM 351
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD ITY+ ++D L + R+++ F SM P+ +++ TL+N K R+D L
Sbjct: 544 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EMG GI + +TY LI F + GNI +L +F +M + P R+++ L
Sbjct: 604 FCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS 663
Query: 256 MGKVDLAMTIFEEMNSSL 273
++ A+ + E++ S+
Sbjct: 664 KEELKRAVAMLEKLQMSM 681
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K ++C D+ ++ I++ ++ L+ F + + G+ PD +++NTLL+ L R+
Sbjct: 108 KQIRC--DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRV 165
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L F +M E+ +P+++T+T L++ R G I E++ L + M + ++P+ Y ++
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+D + K+G A+ + +M
Sbjct: 226 VDGMCKIGDTVSALDLLRKM 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
EE+ I + +I K ++++A +FD + P+++T+ +++ +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GRV+D L F M G+V + I+Y TL+ RK+ ++ L F+EM SG+ PD +T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 80/158 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F + + +E A+ +F + + P ++ + ++ ++ R+ R + +++ + M+ +
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S+ L+ +L L F ++ + G+ PD++T+ L+ + E+L LF
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + RP++ + +L++ L + G++ A+ + + M
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 134/272 (49%), Gaps = 5/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G + A ++ S+ DK + P+ YN ++ + + IL ++L
Sbjct: 5 NTLIGAYCREGLLEEAFEIMNSMADKGL-KPSLFTYNAIINGLCKKGRYARAKGILIEML 63
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y D+ ++ IF E + Q P+ ++ + ++ F+++R +
Sbjct: 64 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPD-LVSFSSLMAVFSRNRHL 122
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++AL+ F +K PD + Y +++ R G + + L M E G V D I+YNT+
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
LN L K + L F EM E G PD T+T LI + GN+ ++L LF M Q+ I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P I Y +LID K+G+++ A +++ M S
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 274
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP---NAYNCVLVASAETNDIDLSFQILKDL 59
N I LCK G + A +L + NI L YN +LV S ++ + +I ++
Sbjct: 40 NAIINGLCKKGRYARAKGILIEML--NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 97
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
L +++ F Q L++ ++ + ++ ++ + ++ +
Sbjct: 98 LRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM 157
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+AL I D + C D+I YN +L+ L + + D F M E G +PDF ++ TL
Sbjct: 158 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 217
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ + + L F M + IKPD++ Y LID F + G +E++ L++ M ++I
Sbjct: 218 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 277
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y LI+ +G V A +++ M
Sbjct: 278 FPNHITYGILINAYCSVGHVSEAFRLWDVM 307
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 35/202 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLN 159
++ N +I A+ + +E+A I + + KP L TYN +++ L GR R +L
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 160 E--------------------------------FASMKEAGVVPDFISYNTLLNNLRKIR 187
E F M GVVPD +S+++L+ + R
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
LD L+YFR+M + G+ PD + YT L+ + R GN+ E+L++ ++M +Q + Y
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
++++ L K + A +F+EM
Sbjct: 181 TILNGLCKEKMLTDADKLFDEM 202
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 114/250 (45%), Gaps = 3/250 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
C+ N S A + + + + +P+ +++ ++ + +D + +D+
Sbjct: 82 CRRDNFSEAKEIFGEMLRQGV-VPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPD 140
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ YT + + + L +E+++ +I N I+ K + + A +FD
Sbjct: 141 NVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFD 200
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ PD T+ ++ + G + L+ F +M + + PD ++YNTL++ K+
Sbjct: 201 EMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVG 260
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
++ + M I P+ +TY LI+++ G++ E+ RL++ M ++ I+P++
Sbjct: 261 EMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCN 320
Query: 248 SLIDNLKKMG 257
++I + G
Sbjct: 321 TVIKGYCRSG 330
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+V+ + +I + + KAL +F + KPD++ YN ++D +V
Sbjct: 200 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKV 259
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G + + M + P+ I+Y L+N + + + M E GIKP L+T
Sbjct: 260 GEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTC 319
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+I + R+G+ ++ M + + P Y +LI++ K+
Sbjct: 320 NTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINDGKR 363
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 136/277 (49%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVL--VASAETNDIDLSFQILKDLLV 61
I+ +CK G+ A +L + + PN YN VL + SAE ++ +DLL
Sbjct: 265 IDGICKDGHHEVANDILSRMPSYGLK-PNVVCYNTVLKGLCSAE------RWEEAEDLL- 316
Query: 62 SSRTLSSDCYTNFARAFIMTDD-CTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAK 115
+ DC + I+ D C L+ +E++++ +I +I F K
Sbjct: 317 -AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK 375
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+++A+++ ++ CKP+ I+Y IVL L R R D + M + G +P+ ++
Sbjct: 376 EGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVT 435
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+NTL+N + K + + ++M +G PDL++Y+ +ID G+ G EE+L L N M
Sbjct: 436 FNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI 495
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ I P+ +Y S+ L + G+ D + +F+ + +
Sbjct: 496 NKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDA 532
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 13/265 (4%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKD 58
MC+ +E C+ G +AVR LQ L K L ++ NC LV SA E +D ++L+
Sbjct: 145 MCHVILEAACRGGGFRSAVRALQVLHAKGCTL-DSGNCNLVVSAICEQGCVDEGVELLRK 203
Query: 59 LLVSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIAS--PESIIVVN-----R 108
L Y + M DD +L++ + V + S PE +
Sbjct: 204 LPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYAT 263
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K E A I + KP+++ YN VL L R + + A M +
Sbjct: 264 IIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED 323
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D +++N L++ + +D + +M E G PD++TYT +I+ F + G ++E++
Sbjct: 324 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAV 383
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNL 253
L +M +P+ Y ++ L
Sbjct: 384 MLLKNMSACGCKPNTISYTIVLKGL 408
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + + +P+ Y V+ + +D + +LK++
Sbjct: 335 VDFFCQNGLVDRVIELLEQMLEHGC-IPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 393
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + I ++Q + + N +I K E+A+
Sbjct: 394 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAI 453
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ + L M G+ P+ I Y+++ + L
Sbjct: 454 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 513
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R D + F + ++ ++ D Y A+I S + + ++ F M P+
Sbjct: 514 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 573
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G V A + E+ S
Sbjct: 574 STYTILIRGLASEGLVREAQDLLSELCS 601
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM--------- 157
N ++ A + +++ + + + C+PD+++YN VL L R +D+
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 158 -LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
+ M E G PD Y T+++ + K ++ M G+KP+++ Y ++
Sbjct: 242 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 301
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE+ L +M Q+ + L+D + G VD + + E+M
Sbjct: 302 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 354
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 44/272 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G +S A L Q + DK + P +YN +++ ++D++ + D+L
Sbjct: 457 NSLLSWLCKEGKMSEATTLWQKMLDKGL-APTKVSYNSMILGHCRQGNLDMAASVFSDML 515
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
DC ++I + ++ + K+ E
Sbjct: 516 --------DC---------------------------GLKPNVITYSILMDGYFKNGDTE 540
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGVVPDFISYN 177
A +FD + P TYNI ++ L +VGR + DML +F E G VP ++YN
Sbjct: 541 YAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFV---EKGFVPVCLTYN 597
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++++ K + L +REM ESG+ P+++TYT LI+ F + N + +L++ N+M+ +
Sbjct: 598 SIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNK 657
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I Y +LID K ++ A +F E+
Sbjct: 658 GLELDIAAYGALIDGFCKKQDIETASWLFSEL 689
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G S A +L+ +K F+P YN ++ + + + +++ S
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKG-FVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESG 623
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + YT F ++ L E+ I +I F K + IE A
Sbjct: 624 VSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETAS 683
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + P+ + YN ++ + + LN M G+ D +Y TL++ L
Sbjct: 684 WLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGL 743
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL L L + EM GI PD++ YT LI+ G +E + ++ +M++ I P++
Sbjct: 744 LKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNV 803
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y +LI K G + A + EM
Sbjct: 804 PIYNALIAGHFKAGNLQEAFRLHNEM 829
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 118/258 (45%), Gaps = 5/258 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K G+VS+A+ + + + + PN Y ++ + N+ DL+ ++ ++
Sbjct: 597 NSIMDGFIKEGSVSSALTAYREMCESGVS-PNVITYTTLINGFCKNNNTDLALKMRNEMR 655
Query: 61 VSSRTLSSDCYTNFARAFIMTDDC-TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
L Y F D T +F E + SP S+I N +I + +
Sbjct: 656 NKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIY-NSLISGYRNLNNM 714
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E AL + + G DL TY ++D L + GR+ L+ ++ M G++PD I Y L
Sbjct: 715 EAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVL 774
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L +L+ EM I P++ Y ALI + GN++E+ RL N+M + +
Sbjct: 775 INGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGL 834
Query: 240 RPSIYVYRSLIDNLKKMG 257
P+ Y LI+ K G
Sbjct: 835 TPNDTTYDILINGKIKGG 852
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK-PDLITYNIVLDILGRVGRVNDMLNE 160
++ +VN +I F K E+A +FD + + C ++ TYN +L L + G++++
Sbjct: 418 TVFIVNSLIRGFLKVESREEASKLFD--EAVACDIANIFTYNSLLSWLCKEGKMSEATTL 475
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ M + G+ P +SYN+++ + LD+ F +M + G+KP+++TY+ L+D + +
Sbjct: 476 WQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFK 535
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
G+ E + +F+ M + I PS + Y I+ L K+G+ A + ++
Sbjct: 536 NGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKK 583
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 117/269 (43%), Gaps = 34/269 (12%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AY+ V+ A + D++L+ +LKD+ S +T+ A + + + L +E+
Sbjct: 281 AYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEM 340
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V +++V ++ + K ++ AL FD + P+ +TY ++++ + G +
Sbjct: 341 VSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNM 400
Query: 155 NDMLNEFASMKEAGVVP----------------------------------DFISYNTLL 180
+ + MK + P + +YN+LL
Sbjct: 401 AKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLL 460
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ +++M + G+ P ++Y ++I R GN++ + +F+DM ++
Sbjct: 461 SWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLK 520
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y L+D K G + A +F+ M
Sbjct: 521 PNVITYSILMDGYFKNGDTEYAFYVFDRM 549
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 104/267 (38%), Gaps = 35/267 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
IE CK GN++ A L +++KNI C V +V+S
Sbjct: 391 IEWCCKNGNMAKAYDLYTQMKNKNI-------CPTV-----------------FIVNS-- 424
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
R F+ + + +E V +I N ++ K ++ +A +
Sbjct: 425 --------LIRGFLKVESREEASKLFDEAVA-CDIANIFTYNSLLSWLCKEGKMSEATTL 475
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + P ++YN ++ R G ++ + F+ M + G+ P+ I+Y+ L++ K
Sbjct: 476 WQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFK 535
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ F M + I P TY I+ + G E+ + ++ P
Sbjct: 536 NGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLT 595
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y S++D K G V A+T + EM S
Sbjct: 596 YNSIMDGFIKEGSVSSALTAYREMCES 622
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 1/219 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CK N A+++ +R+K + L AY ++ + DI+ + + +LL
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ +S Y + + ++ L + ++ + +I K ++ AL
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
++ + PD+I Y ++++ L G++ + A M+ + P+ YN L+
Sbjct: 755 LYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHF 814
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
K L EM + G+ P+ TY LI+ + GN
Sbjct: 815 KAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I +N ++ A K+ I +A +++ + D T +I++ + + F
Sbjct: 209 IKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFL 268
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
K GV D +Y+ ++ K ++L ++M + G P T+T++I + + G
Sbjct: 269 EAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQG 328
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
N+ E+LRL ++M ++ ++ V +L+ K K+ A+ F++MN +
Sbjct: 329 NMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNEN 378
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-- 160
I + N ++ ++ K+ ++ A+ F+ + + D++ + L+ L NDM+ E
Sbjct: 174 IRIYNYLLNSYIKANKLNDAIGCFNRL----VESDIVPWIKFLNFLLTALVKNDMIYEAR 229
Query: 161 --FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ M GV D + + ++ K + +F E G+K D Y+ +I +F
Sbjct: 230 EVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAF 289
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ ++E + L DM+ + PS + S+I K G + A+ + +EM S
Sbjct: 290 CKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVS 342
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 136/265 (51%), Gaps = 12/265 (4%)
Query: 14 NVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
++ +A R L S+ + PN YN ++ A ++ + ++ D+ + ++ Y
Sbjct: 132 SLPSARRFLSSMLRHGV-APNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTY 190
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPES-----IIVVNRIIFAFAKSRQIEKALLIF 126
AF + L E VV + E ++ N ++ K+ ++E A +F
Sbjct: 191 NTLVAAFCRAGE----LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVF 246
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D + PD+++YN +L +VG +++ L F+ M + G+VPD +++ +L++ K
Sbjct: 247 DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 306
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
L+ + +M E G++ + +T+TALID F + G ++++L +M++ I+PS+ Y
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+LI+ K+G++DLA + EM +
Sbjct: 367 NALINGYCKLGRMDLARELIREMEA 391
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 124/257 (48%), Gaps = 34/257 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I CKAGN+ AV L+ +R++ + + +++F L D
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMN----------------EVTFTALID------- 336
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
F + + D L+ +EE+ + S++ N +I + K +++ A +
Sbjct: 337 -------GFCKKGFLDD----ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ + KPD++TY+ ++ +VG ++ M + GV+PD I+Y++L+ L +
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 445
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+RL+ F M + G++PD TYT LID + GN+E++L L ++M ++ + P +
Sbjct: 446 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 505
Query: 246 YRSLIDNLKKMGKVDLA 262
Y LI+ L K + A
Sbjct: 506 YSVLINGLSKSARTKEA 522
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 126/269 (46%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C+AG + A R++ +R++ PN +N ++ + ++ + ++ +++
Sbjct: 191 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 250
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + L E+ Q ++ +I A K+ +E
Sbjct: 251 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 310
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + ++ + + +T+ ++D + G ++D L M++ G+ P + YN L+
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 370
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K+ R+DL REM +KPD++TY+ +I + + GN++ + +L M ++ +
Sbjct: 371 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 430
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI L + +++ A +FE M
Sbjct: 431 PDAITYSSLIRGLCEEKRLNDACELFENM 459
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKAG + A ++ + + + P+ +YN +L + + S + ++
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGL-APDVVSYNTLLSGYCKVGCLHESLAVFSEM- 284
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R L D +T+ A + Q + + ++ + + + +I F K
Sbjct: 285 -TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ ALL + ++ +P ++ YN +++ ++GR++ M+ V PD ++Y+T
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K+ LD ++M + G+ PD +TY++LI + ++ LF +M Q
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P + Y +LID K G V+ A+++ +EM
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 108/274 (39%), Gaps = 18/274 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + A L++ + K + P+ Y+ ++ + ++D +FQ+ + +L
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRV-KPDVVTYSTIISGYCKVGNLDSAFQLNQKML 425
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ R E ++Q+ +I K +E
Sbjct: 426 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 485
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL + D + PD++TY+++++ L + R + + VPD I Y+ L+
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545
Query: 181 -----NNLRKIRRL--DLCLI--------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ + L C+ ++ M + K D Y+ LI R GN+
Sbjct: 546 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
++L M + P+ SL+ L + G V
Sbjct: 606 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 639
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 146/337 (43%), Gaps = 70/337 (20%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C I C++G A R+++ L + +P+ YN ++ ++ +ID + ++L+ +
Sbjct: 144 CTSLIRGFCRSGKTKKATRIMEILENSGA-VPDVITYNVLIGGYCKSGEIDKALEVLERM 202
Query: 60 LVSS--------------------------RTLSSDCYTNFARAFIMTD------DCTQL 87
V+ R L +CY + I+ + Q
Sbjct: 203 SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQA 262
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
+ ++E+ + ++ N +I K ++++A+ +++ CKP++IT+NI+L
Sbjct: 263 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRS 322
Query: 148 LGRVGR-------VNDMLNEFAS----------------------------MKEAGVVPD 172
+ GR ++DML + S M + G VP+
Sbjct: 323 MCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPN 382
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+SYN LL+ + +++D + Y M G PD++TY L+ + + G ++ ++ + N
Sbjct: 383 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + P + Y ++ID L K+GK + A+ + EEM
Sbjct: 443 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEM 479
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 137/273 (50%), Gaps = 11/273 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +CK G + A++ L ++ PN +N +L + T + ++L D+L
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGC-KPNVITHNIILRSMCSTGRWMDAERLLSDML 340
Query: 61 ---VSSRTLSSDCYTNF-ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
S ++ + NF R ++ + + +E++ + + + N ++ F +
Sbjct: 341 RKGCSPSVVTFNILINFLCRKRLLG----RAIDVLEKMPKHGCVPNSLSYNPLLHGFCQE 396
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++++A+ + + C PD++TYN +L L + G+V+ + + G P I+Y
Sbjct: 397 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITY 456
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NT+++ L K+ + + + EM G+KPD++TY+ L+ GR G ++E++++F+DM+
Sbjct: 457 NTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEG 516
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+PS Y +++ L K + A+ M
Sbjct: 517 LSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 549
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
R + + + L F+E ++ +I +I F +S + +KA I + ++
Sbjct: 114 RKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAV 173
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ITYN+++ + G ++ L M V PD ++YNT+L +L +L +
Sbjct: 174 PDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEV 230
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+ PD++TYT LI++ + ++++L ++M+++ +P + Y LI+ + K
Sbjct: 231 LDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 290
Query: 256 MGKVDLAMTIFEEMNS 271
G++D A+ M S
Sbjct: 291 EGRLDEAIKFLNNMPS 306
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F + + ++E +V I+ N ++ A K +++ A+ I + +
Sbjct: 386 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLS 445
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C P LITYN V+D L +VG+ + M+ G+ PD I+Y+TLL L + ++D
Sbjct: 446 SKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVD 505
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F +M IKP +TY A++ + ++ M ++ +P+ Y LI
Sbjct: 506 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565
Query: 251 DNL 253
+ +
Sbjct: 566 EGI 568
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 182 NLRKIRR---LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+LRK+ R L+ L + M G PD++ T+LI F R+G +++ R+ ++
Sbjct: 112 HLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSG 171
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P + Y LI K G++D A+ + E M+
Sbjct: 172 AVPDVITYNVLIGGYCKSGEIDKALEVLERMS 203
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G V AAV +L L K + YN V+ + + + ++L+++
Sbjct: 422 NTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEM-- 479
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ L D Y+ R + + ++ ++ S + N I+ K++Q
Sbjct: 480 RRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 539
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLD 146
+A+ ++ CKP TY I+++
Sbjct: 540 SRAIDFLAYMVEKGCKPTEATYTILIE 566
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 36/200 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG----RVNDMLNE---- 160
+I AFA S + +A+ +F ++ CKP LITYN++L++ G++G ++ ++ +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 161 ----------------------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
F MK AG D ++YN LL+ K R
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEA 333
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ EM +G P ++TY +LI ++ R G ++E++ L N M ++ +P ++ Y +L+
Sbjct: 334 MKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
++ GKV+ AM IFEEM ++
Sbjct: 394 FERAGKVESAMNIFEEMRNA 413
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 2/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L K G VS+A L L++ L +Y ++ A A + + + K +
Sbjct: 180 ISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGC 239
Query: 65 TLSSDCYTNFARAF-IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F M ++ +E++ N +I + ++A
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K D +TYN +LD+ G+ R + + M+ G P ++YN+L++
Sbjct: 300 QVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAY 359
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ LD + +M E G KPD+ TYT L+ F R G +E ++ +F +M+ +P+I
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNI 419
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ + I GK M IF+E+N
Sbjct: 420 CTFNAFIKMYGNRGKFVDMMKIFDEIN 446
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 123/273 (45%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K+ A+++L + + N F P+ YN ++ A A +D + ++ +
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEM-ELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
YT F + EE+ +I N I + +
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFV 436
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ IFD I PD++T+N +L + G+ G +++ F MK AG VP+ ++NTL+
Sbjct: 437 DMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + + +R M ++G+ PDL TY ++ + R G E+S ++ +M+ + +
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
P+ Y SL+ ++ L ++ EE+ S +
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 112/234 (47%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN +L +++ + ++L ++ ++ + S Y + A+ + + ++
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + + ++ F ++ ++E A+ IF+ ++ CKP++ T+N + + G G+
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFV 436
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
DM+ F + G+ PD +++NTLL + F+EM +G P+ T+ LI
Sbjct: 437 DMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ R G+ E+++ ++ M + P + Y +++ L + G + + + EM
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 87/179 (48%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
EE+ + N ++ + KS + ++A+ + + ++ P ++TYN ++ R
Sbjct: 302 FEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYAR 361
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G +++ + M E G PD +Y TLL+ + +++ + F EM +G KP++ T
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICT 421
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ A I +G G + +++F+++ + P I + +L+ + G +F+EM
Sbjct: 422 FNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 9/175 (5%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVN 155
SP+ I +N ++ + + + + KA + D++K P + TYN ++ + R G+
Sbjct: 626 SPD-ITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
++L E + G+ PD ISYNT++ R R D I F EM +SGI PD++TY
Sbjct: 685 EILREILA---KGIKPDIISYNTVIYAYCRNTRMRDASRI-FSEMRDSGIVPDVITYNTF 740
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I S+ EE++ + M + RP+ Y S++D K+ + D A E++
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 16/271 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I + G+ A+ + + + D + P+ YN VL A A + S ++L ++
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGV-TPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + A+ + + EEV +++ ++ +K +
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYN 177
+A F +K PD+ T N ++ I GR VG+ N++L+ MKE G P +YN
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLD---YMKERGFTPSMATYN 668
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L+ + RE+ GIKPD+++Y +I ++ R + ++ R+F++M+
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDS 728
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
I P + Y + I + A ++FEE
Sbjct: 729 GIVPDVITYNTFIGSYA-------ADSMFEE 752
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
IV+ +LG+ GRV+ N F ++E G D SY +L++ R + F++M E
Sbjct: 178 IVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEE 237
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESL-RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G KP L+TY +++ FG+ G + L MK I P Y Y +LI K+
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 262 AMTIFEEMNSS 272
A +FEEM ++
Sbjct: 298 AAQVFEEMKAA 308
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+I + +I K ++ A +F+ ++ D+ +Y ++ GR + +N F
Sbjct: 174 SVIAI--VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKI---------------------------------RR 188
M+E G P I+YN +LN K+ +R
Sbjct: 232 KKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 189 LDL---CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
L F EM +G D +TY AL+D +G++ +E++++ N+M+ PSI
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVT 351
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI + G +D AM + +M
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQM 375
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N +++ ++S K+ I I KPD+I+YN V+ R R+ D F
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+++G+VPD I+YNT + + + + R M + G +P+ TY +++D + +
Sbjct: 723 SEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 222 GNIEESLRLFNDMK 235
+E+ D++
Sbjct: 783 NRKDEAKLFVEDLR 796
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 35/201 (17%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY------------------------- 141
N ++ A A+ E++ + ++ +CKP+ +TY
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 142 ------NIVLDILGRVGRVNDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
++L L V D+L E F+ +KE G PD + N++++ + + +
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGK 647
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
M E G P + TY +L+ R+ + +S + ++ + I+P I Y ++I
Sbjct: 648 ANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 252 NLKKMGKVDLAMTIFEEMNSS 272
+ ++ A IF EM S
Sbjct: 708 AYCRNTRMRDASRIFSEMRDS 728
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 51/109 (46%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ E++ II N +I+A+ ++ ++ A IF ++ PD+ITYN +
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAA 746
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+ + M + G P+ +YN++++ K+ R D ++ ++
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G V AV++ + K P A YN ++ + +D + ++
Sbjct: 188 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 247
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y A M T+ +EE+ + N +I K ++KAL
Sbjct: 248 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 307
Query: 124 LIFDHI--KGLKC---------------------------------KPDLITYNIVLDIL 148
IF+++ +G++ +PDL+ YN +++
Sbjct: 308 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 367
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G ++ M++ + PD ++YNTL+ L + R+D EM E GI+PDL
Sbjct: 368 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDL 427
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY LI + G+++++LR+ N+M + P++ Y +LI L K G+ D A + +E
Sbjct: 428 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 487
Query: 269 M 269
M
Sbjct: 488 M 488
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 36/269 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G V AA+ +++ +R++ PN Y V+ + +D + ++ ++L
Sbjct: 149 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 208
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
PE+++ N +I + +++
Sbjct: 209 TKGEV---------------------------------KPEAVMY-NALIGGYCDQGKLD 234
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
ALL D + + TYN+++ L GR + M G+ PD +YN L+
Sbjct: 235 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 294
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K + L F M G++ ++TYTALI + + G ++E+ +LF++ ++ IR
Sbjct: 295 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 354
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + +Y +LI++ G +D A I EM
Sbjct: 355 PDLVLYNALINSHSTSGNIDRAFEIMGEM 383
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 3/243 (1%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + A L++ + K + P+ YN ++ + ++ + +I +++ +
Sbjct: 266 GRGTEAYELVEEMGGKGL-APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 324
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT A + +E V+ +++ N +I + + S I++A I ++
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 384
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ PD +TYN ++ L +GRV++ M E G+ PD ++YNTL++ +
Sbjct: 385 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L EM G P LLTY ALI + G +++ + +M + I P Y SLI
Sbjct: 445 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504
Query: 251 DNL 253
+ L
Sbjct: 505 EGL 507
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 42/217 (19%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK---GLKCKPDLITYNIVLDI 147
+E + Q+ P ++ N +I F +++ AL I ++ G+ P+ TY V+
Sbjct: 134 LELLRQMPRPNAV-TYNTVIAGFCSRGRVQAALDIMREMRERGGIA--PNQYTYGTVISG 190
Query: 148 LGRVGRVNDMLNEFASMKEAGVV-PDFISYNTLLNNLRKIRRLDLCLIY----------- 195
+VGRV++ + F M G V P+ + YN L+ +LD L+Y
Sbjct: 191 WCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 250
Query: 196 ------------------------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
EMG G+ PD+ TY LI+ + GN++++L +F
Sbjct: 251 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 310
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+M ++ +R ++ Y +LI L K G+V +F+E
Sbjct: 311 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 347
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 33/233 (14%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVA---SAETNDIDLSFQ-- 54
+ NG+ CK GNV A+ + +++ + + Y ++ A + + D F
Sbjct: 293 LINGH----CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 348
Query: 55 ---------ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV 105
+L + L++S + S N RAF + + + I ++V
Sbjct: 349 VRRGIRPDLVLYNALINSHSTSG----NIDRAFEIMGEMEKKRIAPDDVT---------- 394
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
N ++ ++++A + D + +PDL+TYN ++ G V D L M
Sbjct: 395 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 454
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
G P ++YN L+ L K + D +EM E+GI PD TY +LI+
Sbjct: 455 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 35/220 (15%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + EV + II N +I A ++ +E+A+ +F ++ +C+PDL TYN ++ +
Sbjct: 306 LQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISV 365
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL------NNLRKIR-------------- 187
GR R F ++ G PD ++YN+LL N K+R
Sbjct: 366 YGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQD 425
Query: 188 ---------------RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
R D + +R+M SG PD +TYT LIDS G+ +EE+ + +
Sbjct: 426 EMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMS 485
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++P+++ Y +LI K GK + A F M S
Sbjct: 486 EMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRS 525
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 129/258 (50%), Gaps = 11/258 (4%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A++LL +R I P+ YN ++ A + ++++ + + D+ S D +T +
Sbjct: 305 ALQLLNEVRRSGI-RPDIITYNTLISACSRESNLEEAVAVFSDM--ESHRCQPDLWT-YN 360
Query: 76 RAFIMTDDCTQLLIFIEEVVQIAS----PESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
+ C + E ++ S P+++ N +++AF++ EK I + +
Sbjct: 361 AMISVYGRCARARKAEELFKELESKGFFPDAV-TYNSLLYAFSREGNTEKVRDICEEMVK 419
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
D +TYN ++ + G+ GR + + + MK +G PD ++Y L+++L K +++
Sbjct: 420 RGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEE 479
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
EM ++G+KP L TY+ALI ++ + G EE+ FN M++ I+P Y ++D
Sbjct: 480 AANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLD 539
Query: 252 NLKKMGKVDLAMTIFEEM 269
+ ++ AM ++ EM
Sbjct: 540 FFLRFNEMKKAMGLYHEM 557
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD--LCLIYFRE 198
YN ++ + R GR + + M+E G VPD +S+NTL+N K ++ L L E
Sbjct: 252 YNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNE 311
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ SGI+PD++TY LI + R N+EE++ +F+DM+ + +P ++ Y ++I + +
Sbjct: 312 VRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCAR 371
Query: 259 VDLAMTIFEEMNS 271
A +F+E+ S
Sbjct: 372 ARKAEELFKELES 384
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + AF + ++ EE+V+ + + N II + K + ++A+ I+ +K
Sbjct: 394 YNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMK 453
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD +TY +++D LG+ +V + N + M +AGV P +Y+ L+ K + +
Sbjct: 454 SSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKRE 513
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M SGIKPD L Y+ ++D F R +++++ L+++M ++ P +Y ++
Sbjct: 514 EAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMM 573
Query: 251 DNLKKMGKVDLAMTIFEEM 269
L + D+ I +M
Sbjct: 574 HALVRENMWDVVDRIIRDM 592
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN----- 155
+++ V N ++ +A++ + K + D ++ C PDL+++N +++ + G +
Sbjct: 247 DTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLAL 306
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+LNE ++ +G+ PD I+YNTL++ + L+ + F +M +PDL TY A+I
Sbjct: 307 QLLNE---VRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMI 363
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+GR ++ LF +++ + P Y SL+ + G + I EEM
Sbjct: 364 SVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEM 417
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 11/272 (4%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSS 63
G ++ KA ++ ++R S D+ + +N ++ A A + + + I ++
Sbjct: 785 GKLKIWQKAESLVGSLRQRCSKMDRKV-----WNALIHAYAFSGCYERARAIFNTMMRDG 839
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIA---SPESIIVVNRIIFAFAKSRQIE 120
+ + D +A I+ +L + I+E+ + S SI++ + AFA++ +
Sbjct: 840 PSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLT---LEAFAQAGNLF 896
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ I++ +K P + Y I+L +L + RV D+ M+EAG PD N++L
Sbjct: 897 EVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSIL 956
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
I I ++++ ++ +KPD TY LI + R EE L N M+ +
Sbjct: 957 KLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLE 1016
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + YRSLI K + A +FEE+ S+
Sbjct: 1017 PKLDTYRSLITAFNKQRMYEQAEELFEELRSN 1048
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I AF K R E+A +F+ ++ K D Y++++ G N A MKE+G
Sbjct: 1025 LITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESG 1084
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P + + L+ + K + + + + +G+ D L Y+++ID++ + G+ + +
Sbjct: 1085 IEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGI 1144
Query: 229 RLFNDMKQQQIRPSIYVYRSLI 250
+MK+ I P ++ I
Sbjct: 1145 EKLTEMKEAGIEPDHRIWTCFI 1166
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+I+ I+ KPD TYN ++ + R R + + M+ G+ P +Y +L+
Sbjct: 970 IIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAF 1029
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R + F E+ +G K D Y ++ ++ +G+ ++ L MK+ I P+I
Sbjct: 1030 NKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTI 1089
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L+ + K G+ + A + + + ++
Sbjct: 1090 STMHLLMVSYGKSGQPEEAENVLKNLRTT 1118
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I + + R+ E+ + + ++ L +P L TY ++ + F ++
Sbjct: 988 NTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRS 1047
Query: 167 AGVVPDFISYNTLLNNLRK---IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
G D Y+ ++ R R+ + L M ESGI+P + T L+ S+G++G
Sbjct: 1048 NGYKLDRAFYHLMMKTYRTSGDHRKAENLLAI---MKESGIEPTISTMHLLMVSYGKSGQ 1104
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
EE+ + +++ + Y S+ID K G + EM +
Sbjct: 1105 PEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEA 1153
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 51/101 (50%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+P + T ++++ G+ G+ + N +++ GVV D + Y+++++ K +
Sbjct: 1086 EPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIE 1145
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
EM E+GI+PD +T I + + E++ L N ++
Sbjct: 1146 KLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQ 1186
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G V AV++ + K P A YN ++ + +D + ++
Sbjct: 557 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 616
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y A M T+ +EE+ + N +I K ++KAL
Sbjct: 617 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 676
Query: 124 LIFDHI--KGLKC---------------------------------KPDLITYNIVLDIL 148
IF+++ +G++ +PDL+ YN +++
Sbjct: 677 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 736
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G ++ M++ + PD ++YNTL+ L + R+D EM E GI+PDL
Sbjct: 737 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDL 796
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY LI + G+++++LR+ N+M + P++ Y +LI L K G+ D A + +E
Sbjct: 797 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 856
Query: 269 M 269
M
Sbjct: 857 M 857
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 36/269 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G V AA+ +++ +R++ PN Y V+ + +D + ++ ++L
Sbjct: 518 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 577
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
PE+++ N +I + +++
Sbjct: 578 TKGEV---------------------------------KPEAVMY-NALIGGYCDQGKLD 603
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
ALL D + + TYN+++ L GR + M G+ PD +YN L+
Sbjct: 604 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 663
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K + L F M G++ ++TYTALI + + G ++E+ +LF++ ++ IR
Sbjct: 664 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 723
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + +Y +LI++ G +D A I EM
Sbjct: 724 PDLVLYNALINSHSTSGNIDRAFEIMGEM 752
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 3/243 (1%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + A L++ + K + P+ YN ++ + ++ + +I +++ +
Sbjct: 635 GRGTEAYELVEEMGGKGL-APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 693
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT A + +E V+ +++ N +I + + S I++A I ++
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 753
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ PD +TYN ++ L +GRV++ M E G+ PD ++YNTL++ +
Sbjct: 754 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L EM G P LLTY ALI + G +++ + +M + I P Y SLI
Sbjct: 814 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873
Query: 251 DNL 253
+ L
Sbjct: 874 EGL 876
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 42/217 (19%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK---GLKCKPDLITYNIVLDI 147
+E + Q+ P ++ N +I F +++ AL I ++ G+ P+ TY V+
Sbjct: 503 LELLRQMPRPNAV-TYNTVIAGFCSRGRVQAALDIMREMRERGGIA--PNQYTYGTVISG 559
Query: 148 LGRVGRVNDMLNEFASMKEAGVV-PDFISYNTLLNNLRKIRRLDLCLIY----------- 195
+VGRV++ + F M G V P+ + YN L+ +LD L+Y
Sbjct: 560 WCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 619
Query: 196 ------------------------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
EMG G+ PD+ TY LI+ + GN++++L +F
Sbjct: 620 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 679
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+M ++ +R ++ Y +LI L K G+V +F+E
Sbjct: 680 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 716
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 29/228 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVA---SAETNDIDLSFQ------- 54
I CK GNV A+ + +++ + + Y ++ A + + D F
Sbjct: 663 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 722
Query: 55 ----ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
+L + L++S + S N RAF + + + I ++V N ++
Sbjct: 723 RPDLVLYNALINSHSTSG----NIDRAFEIMGEMEKKRIAPDDVT----------YNTLM 768
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++++A + D + +PDL+TYN ++ G V D L M G
Sbjct: 769 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 828
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
P ++YN L+ L K + D +EM E+GI PD TY +LI+
Sbjct: 829 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G V AV++ + K P A YN ++ + +D + ++
Sbjct: 562 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 621
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y A M T+ +EE+ + N +I K ++KAL
Sbjct: 622 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 681
Query: 124 LIFDHI--KGLKC---------------------------------KPDLITYNIVLDIL 148
IF+++ +G++ +PDL+ YN +++
Sbjct: 682 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 741
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G ++ M++ + PD ++YNTL+ L + R+D EM E GI+PDL
Sbjct: 742 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDL 801
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY LI + G+++++LR+ N+M + P++ Y +LI L K G+ D A + +E
Sbjct: 802 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 861
Query: 269 M 269
M
Sbjct: 862 M 862
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 36/269 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G V AA+ +++ +R++ PN Y V+ + +D + ++ ++L
Sbjct: 523 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 582
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
PE+++ N +I + +++
Sbjct: 583 TKGEV---------------------------------KPEAVMY-NALIGGYCDQGKLD 608
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
ALL D + + TYN+++ L GR + M G+ PD +YN L+
Sbjct: 609 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 668
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K + L F M G++ ++TYTALI + + G ++E+ +LF++ ++ IR
Sbjct: 669 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 728
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + +Y +LI++ G +D A I EM
Sbjct: 729 PDLVLYNALINSHSTSGNIDRAFEIMGEM 757
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 3/243 (1%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + A L++ + K + P+ YN ++ + ++ + +I +++ +
Sbjct: 640 GRGTEAYELVEEMGGKGL-APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 698
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT A + +E V+ +++ N +I + + S I++A I ++
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 758
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ PD +TYN ++ L +GRV++ M E G+ PD ++YNTL++ +
Sbjct: 759 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L EM G P LLTY ALI + G +++ + +M + I P Y SLI
Sbjct: 819 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878
Query: 251 DNL 253
+ L
Sbjct: 879 EGL 881
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 42/217 (19%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK---GLKCKPDLITYNIVLDI 147
+E + Q+ P ++ N +I F +++ AL I ++ G+ P+ TY V+
Sbjct: 508 LELLRQMPRPNAV-TYNTVIAGFCSRGRVQAALDIMREMRERGGIA--PNQYTYGTVISG 564
Query: 148 LGRVGRVNDMLNEFASMKEAGVV-PDFISYNTLLNNLRKIRRLDLCLIY----------- 195
+VGRV++ + F M G V P+ + YN L+ +LD L+Y
Sbjct: 565 WCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 624
Query: 196 ------------------------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
EMG G+ PD+ TY LI+ + GN++++L +F
Sbjct: 625 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 684
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+M ++ +R ++ Y +LI L K G+V +F+E
Sbjct: 685 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 721
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 29/228 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVA---SAETNDIDLSFQ------- 54
I CK GNV A+ + +++ + + Y ++ A + + D F
Sbjct: 668 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 727
Query: 55 ----ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
+L + L++S + S N RAF + + + I ++V N ++
Sbjct: 728 RPDLVLYNALINSHSTSG----NIDRAFEIMGEMEKKRIAPDDVT----------YNTLM 773
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++++A + D + +PDL+TYN ++ G V D L M G
Sbjct: 774 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 833
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
P ++YN L+ L K + D +EM E+GI PD TY +LI+
Sbjct: 834 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 132/263 (50%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC NV+ A+ L + +K I PN YN ++ + ++L D++
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ ++ AF+ + +E+++ + I + +I F ++++A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + C P+++TYN ++ + RV + + F M + G+V + ++YNTL+ L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ D+ F++M G+ PD++TY+ L+D + G +E++L +F +++ ++ P I
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
Y Y +I+ + K GKV+ +F
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLF 523
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 133/271 (49%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC G S A RLL + ++ I PN ++ ++ A + + + ++ +++
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R++ D Y++ F M D + E ++ +++ N +I F K+++
Sbjct: 353 --KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+ + +F + + +TYN ++ L + G + F M GV PD I+Y+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K +L+ L+ F + +S ++PD+ TY +I+ + G +E+ LF + +
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P++ +Y ++I + G + A +F EM
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + + ++ + I+ +V + ++ K I+ AL + ++
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + D++ Y ++D L VND LN F M G+ P+ ++YN+L+ L R
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+++T++ALID+F + G + E+ +L+++M ++ I P I+ Y SLI
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A +FE M S
Sbjct: 368 NGFCMHDRLDEAKHMFELMIS 388
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDL----- 59
+ LCK G++ A+ LL+ + I Y ++ A +++ + + ++
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+V+ +L C N+ R D ++LL ++++ +++ + +I AF K
Sbjct: 287 RPNVVTYNSLIR-CLCNYGR----WSDASRLL---SDMIERKINPNVVTFSALIDAFVKE 338
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ +A ++D + PD+ TY+ +++ R+++ + F M P+ ++Y
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NTL+ K +R++ + FREM + G+ + +TY LI + G+ + + ++F M
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y L+D L K GK++ A+ +FE + S
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 98/185 (52%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ + ++++ + + + N +I + +A+ + D + C+PDL TY V
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
++ L + G ++ L+ M++ + D + Y T+++ L + ++ L F EM GI
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+P+++TY +LI G ++ RL +DM +++I P++ + +LID K GK+ A
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 265 IFEEM 269
+++EM
Sbjct: 347 LYDEM 351
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 91/177 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+VQ SI+ N+++ A AK + + + + + ++ L+ DL +YNI+++ R
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++ L M + G PD ++ ++LLN +R+ + +M +P+ +T+
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI E++ L + M + +P ++ Y ++++ L K G +DLA+++ ++M
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 83/165 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F + Q+ AL + + L +PD++T + +L+ R+++ + M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
P+ +++NTL++ L + + M G +PDL TY +++ + G+I+
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+L L M++ +I + +Y ++ID L V+ A+ +F EM++
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 77/152 (50%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ +F + + P ++ +N +L + ++ + + +++ M+ + D SYN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + +L L L +M + G +PD++T ++L++ + I E++ L + M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +P+ + +LI L K A+ + + M
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK V+ A + + K I PN Y ++ ++ + ++L D++
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y+ AF+ + EE+V+++ I+ + +I +I+
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + C D+++YN +++ + RV D + F M + G+V + ++YNTL+
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +D +F +M GI PD+ TY L+ G +E++L +F DM+++++
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
I Y ++I + K GKV+ A ++F
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 137/273 (50%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ C+ VS AV L+ + + + P+ AYN ++ + +T ++ +F K++
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + + + ++++ ++I + ++ AF K+ ++ +A
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + + PD++TY+ +++ L R+++ F M G + D +SYNTL+N
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +R++ + FREM + G+ + +TY LI F + G+++++ F+ M I P I
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ Y L+ L G+++ A+ IFE+M DL
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 94/163 (57%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F Q+ AL I + L +PD +T +++ R RV+D ++ M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD ++YN ++++L K +R++ +F+E+ GI+P+++TYTAL++ + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ RL +DM +++I P++ Y +L+D K GKV A +FEEM
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 91/168 (54%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + ++ F + ++ A+ + D + + KPD++ YN ++D L + RVND + F
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ G+ P+ ++Y L+N L R +M + I P+++TY+AL+D+F + G
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ E+ LF +M + I P I Y SLI+ L ++D A +F+ M S
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC + S A RLL + K I PN Y+ +L A + + + ++ ++++ S
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKI-TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y++ + D + + +V ++ N +I F K++++E +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + + +TYN ++ + G V+ F+ M G+ PD +YN LL L
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
L+ L+ F +M + + D++TYT +I +TG +EE+ LF + + ++P I
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +++ L G + ++ +M
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 89/168 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ NR++ A K ++ + + + ++ L + DL T+NIV++ +V+ L+
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G PD ++ +L+N + R+ + +M E G KPD++ Y A+IDS +T
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ F +++++ IRP++ Y +L++ L + A + +M
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 58 DLLVSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
DL+VS L+ Y F + E+ Q + + N +I F ++
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++KA F + PD+ TYNI+L L G + L F M++ + D ++Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
T++ + K +++ F + G+KPD++TYT ++ G + E L+ MKQ
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 237 QQI 239
+ +
Sbjct: 499 EGL 501
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 72/134 (53%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P ++ +N +L + ++ + + +++ M+ G+ D ++N ++N ++ L L
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+M + G +PD +T +L++ F R + +++ L + M + +P I Y ++ID+L K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 256 MGKVDLAMTIFEEM 269
+V+ A F+E+
Sbjct: 203 TKRVNDAFDFFKEI 216
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I CKA V ++L + + + + YN ++ + D+D + + +
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + + L+ E++ + I+ +I K+ ++E+
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 122 ALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
A +F + KGLK PD++TY ++ L G ++++ + MK+ G++ +
Sbjct: 454 AWSLFCSLSLKGLK--PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 133/273 (48%), Gaps = 8/273 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ G + A +++ ++ K + P+ ++ ++ +D + ++ K++L SS
Sbjct: 88 VDGLCRDGKMDRACEMVREMKLKGVE-PDKFTFSALITGWCNARKVDEALKLYKEILTSS 146
Query: 64 RTL----SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
L SS T R + + +L +E A ++ +I F KS +
Sbjct: 147 CRLDAVSSSALITGLCRERRI-GEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNL 205
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKA+ + ++G KC P+++TY+ +L L + G ++ L+ F M G VP+ ++Y TL
Sbjct: 206 EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL 265
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L ++D + EM + D ++Y AL+D + R G IEE+ +LF +M +
Sbjct: 266 IHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSC 325
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y L+ +++ A + E M ++
Sbjct: 326 LPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA S A +L+ +RD P+ Y+ V+ + ++D + +IL+++
Sbjct: 13 NVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM- 71
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V+ ++ D ++ ++ + +++
Sbjct: 72 VTRDGMAPD---------------------------------VVTYTSVVDGLCRDGKMD 98
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + +K +PD T++ ++ +V++ L + + + D +S + L+
Sbjct: 99 RACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALI 158
Query: 181 NNLRKIRRLDLCLIYFREM---GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L + RR+ F+EM + KPD++TYTALID F ++GN+E+++++ M+ +
Sbjct: 159 TGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGR 218
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P++ Y SL+ L K G +D A+ +F M S
Sbjct: 219 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 252
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 128/287 (44%), Gaps = 16/287 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN---AYNCVLVASAETNDIDLSFQILKDLLVS 62
I LC A V AA L+ + P +YN +L I+ + Q+ K++
Sbjct: 266 IHGLCAAHKVDAARLLMDEM--TATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAK 323
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA-FAKSRQIEK 121
S YT R F + +E + A + +V I+ A ++++++ +
Sbjct: 324 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVE 383
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + P+ +TY+ ++D L + GRVN + ++ + PD ++Y ++
Sbjct: 384 AAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIE 439
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R + L EM ++P + T+ ++I + R G+++E+ +L M + P
Sbjct: 440 GLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 499
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM------NSSLSDLAGPKDF 282
+ Y +L++ + G++++A +FE M +SS ++L + F
Sbjct: 500 GMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAF 546
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 135/286 (47%), Gaps = 29/286 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C+ G + A +L + + K+ LP+ Y C++ + ++ + +L+++
Sbjct: 298 NALLDGYCRLGRIEEAKQLFKEMAAKSC-LPDRITYTCLVRGFCNASRLEEARFLLENMK 356
Query: 61 VSSRTLSSDCYT------NFARA--FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
++ + D T ++RA F+ + FI+E++ + + + +I
Sbjct: 357 TAA-GIDPDVVTYSIVVAGYSRAKRFVEAAE------FIQEMIARNVAPNAVTYSSLIDG 409
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K+ ++ A+ + ++ KPD++TY IV++ L R + L M V P
Sbjct: 410 LCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPS 465
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++N+++ L ++ +D M G++P ++TYT L++ F RTG +E + LF
Sbjct: 466 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 525
Query: 233 DMKQQQIRPSI-------YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M+++ + S + +LI L K ++D AM + EE+ S
Sbjct: 526 VMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRS 571
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFISYNTLLNNLRKIRRLDLCLI 194
P+ TYN+V++ L + + M++ V PD ++Y+T++N K +D
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 195 YFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
REM G+ PD++TYT+++D R G ++ + + +MK + + P + + +LI
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 254 KKMGKVDLAMTIFEEMNSS 272
KVD A+ +++E+ +S
Sbjct: 127 CNARKVDEALKLYKEILTS 145
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREM--GESGIKPDLLTYTALIDSFGRTGNIEE 226
V P+ +YN ++N L K R +EM G+S + PDL+TY+ +I+ F + G ++
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKS-VAPDLVTYSTVINGFCKQGEMDR 63
Query: 227 SLRLFNDM-KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ + +M + + P + Y S++D L + GK+D A + EM
Sbjct: 64 ACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMK 108
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 16/229 (6%)
Query: 18 AVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A +Q + +N+ PNA Y+ ++ + ++ + ++LK+ V + + YT
Sbjct: 384 AAEFIQEMIARNV-APNAVTYSSLIDGLCKAGRVNHAMEVLKN--VDKPDVVT--YTIVI 438
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
TD + L +EE+V S+ N +I A + +++A + + +
Sbjct: 439 EGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 498
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKE--------AGVVPDFISYNTLLNNLRKIR 187
P ++TY +L+ R GR+ F M+ A +VP+ +++ L+ L K R
Sbjct: 499 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKAR 557
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+D + E+ +P A++D R G EE+ +L N + +
Sbjct: 558 EIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 606
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 129/272 (47%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N +I LCK G + A L+ + + + +PNA YN ++ D+D ++ +++
Sbjct: 290 NSFISGLCKEGRLEEASGLICKMLEGGL-VPNAVTYNALIDGYCNKGDLDKAYAYRDEMI 348
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y F A M I+E+ + + N +I + + +
Sbjct: 349 SKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAK 408
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D + G +P L+TY ++ +LG+ R+ + F+ +++ G++PD I +N L+
Sbjct: 409 RAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALI 468
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +D +EM + PD +TY L+ + R G +EE+ +L ++MK++ I+
Sbjct: 469 DGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIK 528
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y +LI K G + A + +EM ++
Sbjct: 529 PDHISYNTLISGYSKRGDMKDAFRVRDEMMTT 560
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 3/254 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N +I L G + A +++ +R+K + +P+A +N ++ D +F +L +++
Sbjct: 360 NLFIHALFMEGRMGDADNMIKEMREKGM-MPDAVTHNILINGYCRCGDAKRAFGLLDEMV 418
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT+ + + ++ Q IIV N +I + I+
Sbjct: 419 GKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID 478
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + + +K PD ITYN ++ R G+V + MK G+ PD ISYNTL+
Sbjct: 479 RAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLI 538
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + EM +G P +LTY ALI + E + L +M + I
Sbjct: 539 SGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGIT 598
Query: 241 PSIYVYRSLIDNLK 254
P Y S+I+ ++
Sbjct: 599 PDDSTYLSIIEAME 612
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 116/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G A + Q+++DK + P+ YN + + ++ + ++ +L
Sbjct: 255 NTIIHGHCLRGKFQRARVIFQTMKDKGL-EPDCYTYNSFISGLCKEGRLEEASGLICKML 313
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y + D + + +E++ S++ N I A ++
Sbjct: 314 EGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMG 373
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + ++ PD +T+NI+++ R G M G+ P ++Y +L+
Sbjct: 374 DADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI 433
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K R+ F ++ + G+ PD++ + ALID GNI+ + +L +M ++
Sbjct: 434 YVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVL 493
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +L+ + GKV+ A + +EM
Sbjct: 494 PDEITYNTLMQGYCREGKVEEARQLLDEM 522
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
FI + + +++ N II + ++A +IF +K +PD TYN + L
Sbjct: 238 FIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLC 297
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ GR+ + M E G+VP+ ++YN L++ LD Y EM GI L+
Sbjct: 298 KEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLV 357
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY I + G + ++ + +M+++ + P + LI+ + G A + +EM
Sbjct: 358 TYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEM 417
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 85/170 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I N+++ F K + + A +++ + + + L T+NI++++L + G++
Sbjct: 180 NIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFI 239
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+ GV P+ ++YNT+++ + + F+ M + G++PD TY + I +
Sbjct: 240 GHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKE 299
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G +EE+ L M + + P+ Y +LID G +D A +EM S
Sbjct: 300 GRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMIS 349
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 2/192 (1%)
Query: 73 NFARAFIMTDDCTQLLIFIEEVV--QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
N + I++ CT IF E + ++ ++ + ++ A+ + ++ +AL F IK
Sbjct: 114 NLIQRLILSPTCTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIK 173
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P++ T N +L + ++ R +A M + ++N ++N L K +L
Sbjct: 174 EKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLK 233
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ M G+KP+++TY +I G + + +F MK + + P Y Y S I
Sbjct: 234 KAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFI 293
Query: 251 DNLKKMGKVDLA 262
L K G+++ A
Sbjct: 294 SGLCKEGRLEEA 305
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 27/235 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETN---DIDLSFQ--- 54
NGY C+ G+ A LL + K I P Y ++ + N + D F
Sbjct: 399 NGY----CRCGDAKRAFGLLDEMVGKGI-QPTLVTYTSLIYVLGKRNRMKEADALFSKIQ 453
Query: 55 ---ILKDLLVSSRTLSSDCYT-NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
+L D++V + + C N RAF + + + + +E I N ++
Sbjct: 454 QEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDE----------ITYNTLM 503
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
+ + ++E+A + D +K KPD I+YN ++ + G + D M G
Sbjct: 504 QGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFD 563
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
P ++YN L+ L K + + +EM GI PD TY ++I++ ++E
Sbjct: 564 PTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 102/187 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F ++V ++ N +I K + A +F+ +K + PD++TYN ++D G
Sbjct: 119 FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ + F MK G PD I+YN L+N+ K + + +FREM + +KP+++
Sbjct: 179 KIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVI 238
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y+ LID+ + G ++ +++ F DM + + P+ + Y SLID K G + A + +EM
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298
Query: 270 NSSLSDL 276
DL
Sbjct: 299 LQEHVDL 305
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 6/167 (3%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE---FAS 163
N + +K+ + + + F + G P + TYNI ++G V + DML F
Sbjct: 101 NAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNI---MIGHVCKEGDMLTARSLFEQ 157
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK+ G+ PD ++YNTL++ KI LD + F EM G +PD++TY ALI+SF +
Sbjct: 158 MKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKG 217
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ + F +MK + ++P++ Y +LID L K G + +A+ F +M
Sbjct: 218 MLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMT 264
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 123/243 (50%), Gaps = 2/243 (0%)
Query: 32 LPNAYNC--VLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLI 89
LP A +C L ++ + DLS +D++ + + Y D
Sbjct: 94 LPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARS 153
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
E++ ++ I+ N +I + K +++++ +F+ +K + C+PD+ITYN +++
Sbjct: 154 LFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFC 213
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ + F MK+ + P+ ISY+TL++ L K + + + +F +M G+ P+
Sbjct: 214 KFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEF 273
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY++LID+ + GN+ E+ L ++M Q+ + +I Y +L+D L + G ++ A +F M
Sbjct: 274 TYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333
Query: 270 NSS 272
+
Sbjct: 334 GKA 336
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 121/270 (44%), Gaps = 3/270 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN ++ +L KAG + + + I P YN ++ + D+ + + + +
Sbjct: 100 CNAFLHRLSKAGEGDLSRDFFRDMVGAGI-APTVFTYNIMIGHVCKEGDMLTARSLFEQM 158
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
T Y + + + EE+ + +I N +I +F K + +
Sbjct: 159 KKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGM 218
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A F +K KP++I+Y+ ++D L + G + + F M G++P+ +Y++L
Sbjct: 219 LRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSL 278
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K L + EM + + +++TYT L+D G + E+ LF M + +
Sbjct: 279 IDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGV 338
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +LI K+ +D AM +F EM
Sbjct: 339 TPNLQAYTALIHGHIKVRSMDKAMELFNEM 368
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 122/267 (45%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G + A++ + + LPN Y+ ++ A+ + ++ +F + ++L
Sbjct: 244 IDALCKEGMMQMAIKFFVDMTRVGL-LPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L+ YT + + + ++ +I K R ++KA+
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ ++ KPD++ + ++ L ++ + MKE+G+ + + Y TL++
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAY 422
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + EM + G + ++T+ ALID + G ++E++ F M ++P++
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
VY +LID L K + A +F+EM
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQ 509
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRL----LQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I+ CKAGN+ A L LQ D NI Y +L E ++ + ++ + +
Sbjct: 279 IDANCKAGNLGEAFMLADEMLQEHVDLNIV---TYTTLLDGLCEEGMMNEAEELFRAMGK 335
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ T + YT I + + E+ + I++ I++ ++E+
Sbjct: 336 AGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEE 395
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+I +K + + Y ++D + G + +N M++ G +++ L++
Sbjct: 396 CKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALID 455
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K + + YF M + ++P++ YTALID + I ++ +LF++M+ + + P
Sbjct: 456 GLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIP 515
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ID K G A+ + +M
Sbjct: 516 DKIAYTAMIDGNLKHGNFQEALNMRNKM 543
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C P ++ + +L +G + F M + V+P S N L+ L K DL
Sbjct: 58 CVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSR 117
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+FR+M +GI P + TY +I + G++ + LF MK+ + P I Y +LID
Sbjct: 118 DFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY 177
Query: 254 KKMGKVDLAMTIFEEM 269
K+G +D ++ +FEEM
Sbjct: 178 GKIGLLDESVCLFEEM 193
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E A F + + P + N L L + G + + F M AG+ P +YN
Sbjct: 78 LEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNI 137
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ ++ K + F +M + G+ PD++TY LID +G+ G ++ES+ LF +MK
Sbjct: 138 MIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMG 197
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y +LI++ K + A F EM
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREM 228
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 119/261 (45%), Gaps = 3/261 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K ++ A+ L +R+K+I P+ + ++ + ++ I+ ++ S +
Sbjct: 354 KVRSMDKAMELFNEMREKDI-KPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANP 412
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
YT A+ + T+ + +EE+ + + +++ +I K +++A+ F
Sbjct: 413 VIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGR 472
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ +P++ Y ++D L + + D F M++ ++PD I+Y +++ K
Sbjct: 473 MPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGN 532
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L +M E GI+ DL YT+L+ + G ++++ + +M + I P +
Sbjct: 533 FQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTR 592
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+ ++G +D A+ + E+
Sbjct: 593 LLRKHYELGNIDEAIELQNEL 613
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 34/229 (14%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
KAGN + A+ LL+ +RD + C L+ + R L +
Sbjct: 424 KAGNRTEAINLLEEMRDLGTEVTVVTFCALIDG-----------------LCKRGLVQEA 466
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
F R M D Q ++ V +I K+ I A +FD ++
Sbjct: 467 IYYFGR---MPDHDLQ--------------PNVAVYTALIDGLCKNNCIGDAKKLFDEMQ 509
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD I Y ++D + G + LN M E G+ D +Y +L+ L + ++
Sbjct: 510 DKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQ 569
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ EM GI PD T L+ GNI+E++ L N++ ++ +
Sbjct: 570 QARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 138/275 (50%), Gaps = 11/275 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +CK G + A++ L S+ PN +N +L + T + ++L +++
Sbjct: 55 NVLVNGMCKEGRLDEAIKFLNSMPSYG-SQPNVITHNIILRSMCSTGRWMDAEKLLTEMV 113
Query: 61 ---VSSRTLSSDCYTNF-ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
S ++ + NF R ++ + + +E++ + + N ++ F K
Sbjct: 114 RKGCSPSVVTFNILINFLCRKGLLG----RAIDILEKMPTHGCTPNSLSYNPLLHGFCKE 169
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++++A+ + + C PD++TYN +L L + G+V+ + + G P I+Y
Sbjct: 170 KKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITY 229
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NT+++ L K+ + D + EM G+KPD++TY++LI R G +EE+++ F+D++
Sbjct: 230 NTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEG 289
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++P+ + Y S++ L K + D A+ M S
Sbjct: 290 FGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMIS 324
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 103/220 (46%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ IL+ + T +S Y F + + ++E +V I+ N ++
Sbjct: 140 AIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLT 199
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A K +++ A+ + + + C P LITYN V+D L +VG+ + + M+ G+ P
Sbjct: 200 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKP 259
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y++L+ L + +++ + +F ++ G+KP+ TY +++ + + ++
Sbjct: 260 DVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFL 319
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + +P+ Y LI+ + G A+ + E+ S
Sbjct: 320 AYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCS 359
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 61 VSSRTLSSDCYTNFARAFIMTD-DCT-----QLLIFIEEVVQIASPESIIVVNRIIFAFA 114
V R L +CY + I+ + C Q + ++E+ ++ N ++
Sbjct: 3 VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNEFA--------- 162
K ++++A+ + + +P++IT+NI+L + GR D +L E
Sbjct: 63 KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122
Query: 163 -----------------------SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
M G P+ +SYN LL+ K +++D + Y M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G PD++TY ++ + + G ++ ++ L N + + P + Y ++ID L K+GK
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242
Query: 260 DLAMTIFEEM 269
D A+ + EM
Sbjct: 243 DQAVELLHEM 252
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 5/171 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G V AAV LL L K + YN V+ ++ D + ++L ++
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEM-- 252
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ L D Y++ + + F +V + N I+F K++Q
Sbjct: 253 RGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++A+ ++ CKP ++Y I+++ + G + L + GVV
Sbjct: 313 DRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 96/177 (54%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
EV Q +I N +I A ++S +E A+ +F+ + +C+PDL TYN ++ + GR G
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCG 342
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ + F + E G +PD ++YN+LL K +D E+ ++G K + +TY
Sbjct: 343 KAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYN 402
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I +G+ G ++ ++ L+++M+ P Y +ID+L KM K+ A + E+M
Sbjct: 403 TMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDM 459
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 38/270 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + + G A RL L +K F+P+A YN +L A A+ ++D
Sbjct: 332 NAMVSVHGRCGKAEEAERLFGELVEKG-FMPDAVTYNSLLYAFAKEGNVD---------- 380
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ C EE+V+ ++ I N +I + K +++
Sbjct: 381 ----KVEHTC---------------------EELVKAGFKKNEITYNTMIHMYGKMGRLD 415
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ ++D ++ + C PD +TY +++D LG++ ++ + M +AG+ P ++++ L+
Sbjct: 416 LAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALI 475
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K R F M SG+KPD L Y ++D F R+G E+ LRL+ M R
Sbjct: 476 CAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYR 535
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P +Y+ L+ L K K + I ++M
Sbjct: 536 PDDDMYQVLLVALAKEDKCEEIEEIIQDME 565
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 130/271 (47%), Gaps = 5/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRL--LQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
N I K+G ++A V L L +R + P+ YN ++ A +++++++ + + ++
Sbjct: 260 NTLINARSKSGCLAAGVALDLLFEVRQSGL-RPDVITYNTLISACSQSSNLEDAVTVFEE 318
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ S Y + E+V+ + N +++AFAK
Sbjct: 319 MIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGN 378
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++K + + K + ITYN ++ + G++GR++ + + M+ G PD ++Y
Sbjct: 379 VDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTV 438
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++++L K+ ++ +M ++G+KP L+ ++ALI ++ + G ++ + F+ M
Sbjct: 439 MIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASG 498
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P Y ++D + G+ + + ++ M
Sbjct: 499 VKPDRLAYLVMLDVFARSGETEKMLRLYRTM 529
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%)
Query: 21 LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIM 80
L++ LR + +N ++ A AE+ + + + +++ + + D RA I+
Sbjct: 768 LVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIV 827
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
+L + + E+ + S V ++ AFAK+ + + + I++ +K P++
Sbjct: 828 DGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHL 887
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
Y + +L R D+ A M+ AG PD +N+LLN D ++ +
Sbjct: 888 YRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSIL 947
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
E+G++PD TY LI + R+ EE L N+M ++ + P + Y+SL+ K +
Sbjct: 948 EAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELRE 1007
Query: 261 LAMTIFEEMNS 271
A +FEEM S
Sbjct: 1008 QADQLFEEMRS 1018
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E + + +P S V ++ ++RQ A +F G + +N ++ + R
Sbjct: 178 EWLARSTAPASRAVAV-VLGVLGRARQDSIAEEVFLRFAGEGAT--VQVFNAMMGVYARS 234
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL--DLCLIYFREMGESGIKPDLL 209
GR +D +M + G+ PD +S+NTL+N K L + L E+ +SG++PD++
Sbjct: 235 GRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVI 294
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY LI + ++ N+E+++ +F +M + RP ++ Y +++ + GK + A +F E+
Sbjct: 295 TYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGEL 354
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
A+P+ + V R + + R AL F+ + P +VL +LGR + D
Sbjct: 153 ATPDEVAFVVRAVGESSWRR----ALDAFEWL-ARSTAPASRAVAVVLGVLGRARQ--DS 205
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ E ++ AG +N ++ + R D M + GI PDL+++ LI++
Sbjct: 206 IAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINA 265
Query: 218 FGRTGNIEE--SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++G + +L L +++Q +RP + Y +LI + ++ A+T+FEEM +S
Sbjct: 266 RSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIAS 322
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 75/217 (34%), Gaps = 35/217 (16%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ I E+ + + N ++ + + ++ ++ I +PD TYN ++ +
Sbjct: 906 LMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMY 965
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM--------- 199
R R + M + G+ P SY +LL K + F EM
Sbjct: 966 CRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNR 1025
Query: 200 --------------------------GESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
E GI+P + T L+ S+G G E+ + N
Sbjct: 1026 SIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNS 1085
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+K + S Y ++ D K G DL + EM
Sbjct: 1086 LKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMK 1122
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 129/283 (45%), Gaps = 14/283 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK + AA + + K P+ +N ++ ID ++L ++
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCS-PDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y F + D L ++++ I+ N ++ + +++
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 476
Query: 121 KALLIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
AL +F ++ K +PD+ TYNI++ L G+ + + M G+
Sbjct: 477 DALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGI 536
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
VP+ I+Y++++N L K RLD F MG PD++T+ L+ + + G +++ L
Sbjct: 537 VPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF +M ++ I Y +LI +K+G ++ A+ IF+EM SS
Sbjct: 597 LFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISS 639
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDLL 60
++ +CK G+ +A+ LL+ + + + PN Y+ + L +D + +++
Sbjct: 220 VDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKG 279
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + +C + F + ++ ++E+++ +++ + +I A+ K R+
Sbjct: 280 IFPDLFTYNCMID---GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFF 336
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++D + P+ ITYN ++D + R++ + F M G PD ++NTL+
Sbjct: 337 EAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLI 396
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +R+D EM E+G+ D TY LI F G++ +L L M +
Sbjct: 397 DGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 456
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
P I +L+D L GK+ A+ +F+ M S DL + F
Sbjct: 457 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPF 498
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + N +I F ++ AL F I L +PD++T++ +L L RV++ L+
Sbjct: 109 PCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALD 168
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M P+ +++ TL+N L + R+ + M E G++P+ +TY ++D
Sbjct: 169 LFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 224
Query: 220 RTGNIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ G+ +L L M++ I+P++ +Y ++ID L K G+ A ++ EM
Sbjct: 225 KIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQ 276
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 20/249 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLL 60
N I C G+++AA+ L Q + + P+ C +L + + + ++ K +
Sbjct: 428 NTLIHGFCLVGDLNAALDLSQQMISSGV-CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLI--------FIE-EVVQIASPESIIVVNRIIF 111
S L + N + T +LI F+E E + P IV N I +
Sbjct: 487 KSKMDLDASRPFNGVEPDVQT---YNILISGLINEGKFLEAEELYKEMPHRGIVPNTITY 543
Query: 112 A-----FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+ K ++++A +FD + PD++T+N ++ + GRV+D L F M
Sbjct: 544 SSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGR 603
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+V D I+Y TL++ RK+ ++ L F+EM SG+ PD +T +++ ++
Sbjct: 604 RGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKR 663
Query: 227 SLRLFNDMK 235
++ + D++
Sbjct: 664 AVAMLEDLQ 672
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+I N+++ + + + + ++ ++ + D+ ++NI++ ++ L+ F
Sbjct: 76 SVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTF 135
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ + G PD ++++TLL+ L R+ L F +M +P+++T+T L++ R
Sbjct: 136 GKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCRE 191
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G + E++ L + M + ++P+ Y +++D + K+G A+ + +M
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM 239
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F + + +E A+ +F + + P +I +N ++ ++ R+ R + +++ + M+ +
Sbjct: 51 GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S+N L+ +L L F ++ + G +PD++T++ L+ + E+L LF
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Q RP++ + +L++ L + G+V A+ + + M
Sbjct: 171 H----QMCRPNVVTFTTLMNGLCREGRVVEAVALLDRM 204
>gi|224112321|ref|XP_002316152.1| predicted protein [Populus trichocarpa]
gi|222865192|gb|EEF02323.1| predicted protein [Populus trichocarpa]
Length = 785
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 125/251 (49%), Gaps = 4/251 (1%)
Query: 22 LQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD-CYTNFARAFIM 80
L++ DK F+PN + V+ A N+ D + K + + +D CY
Sbjct: 109 LETQLDKLQFVPNMTH-VVQALKIINESDALLSLFKWAKRQTWYVPNDECYVMLFDGLNQ 167
Query: 81 TDDCTQLLIFIEEVV--QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDL 138
+ D + +E+V I S NR++ AK+ ++E + F ++ CK D
Sbjct: 168 SRDFDGIQSLFDEMVCDSIKSATQFSAYNRVLKYLAKAEKLEVSFCCFKKVQDSGCKIDT 227
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
TYNI++ + G + +M+ A D +Y ++ +L K RLD F+E
Sbjct: 228 ETYNILMKLFLNKGLPYKAFEIYETMEAAHCSLDVSTYELMIPSLAKSGRLDAAFKLFQE 287
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M E +P L +++L+DS G+ G +E S++++ +M+ +RPS +Y SLI++ K GK
Sbjct: 288 MKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGK 347
Query: 259 VDLAMTIFEEM 269
+D A+ +++EM
Sbjct: 348 LDAALRLWDEM 358
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 90/152 (59%)
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA I++ ++ C D+ TY +++ L + GR++ F MKE P +++L+
Sbjct: 245 KAFEIYETMEAAHCSLDVSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLV 304
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+++ K RL+ + + EM G++P + Y +LI+S+ + G ++ +LRL+++MK R
Sbjct: 305 DSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFR 364
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ +Y +I++ K GK+D+AM+IF +M +
Sbjct: 365 PNFGLYTLIIESHAKSGKLDIAMSIFRDMEKA 396
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 118/239 (49%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
+AYN VL A+ +++SF K + S + ++ Y + F+ + E
Sbjct: 193 SAYNRVLKYLAKAEKLEVSFCCFKKVQDSGCKIDTETYNILMKLFLNKGLPYKAFEIYET 252
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ + +I + AKS +++ A +F +K +P L ++ ++D +G+ GR
Sbjct: 253 MEAAHCSLDVSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAGR 312
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ + + M+ G+ P I Y +L+ + K +LD L + EM +G +P+ YT
Sbjct: 313 LETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTL 372
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+I+S ++G ++ ++ +F DM++ P+ Y SL++ G+VD AM ++ M ++
Sbjct: 373 IIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNA 431
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 94/170 (55%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ + + ++ + K+ ++E ++ ++ ++GL +P I Y +++ + G+++ L +
Sbjct: 296 SLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLW 355
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK AG P+F Y ++ + K +LD+ + FR+M ++G P TY++L++ +
Sbjct: 356 DEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAAS 415
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G ++ +++L+N M +RP + Y +L+ L VD+A I EM +
Sbjct: 416 GQVDAAMKLYNSMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKA 465
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L K+G + AA +L Q ++++N F P+ ++ ++ + + ++ S ++ ++
Sbjct: 269 IPSLAKSGRLDAAFKLFQEMKERN-FRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLG 327
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S+ Y + ++ L +E+ + + II + AKS +++ A+
Sbjct: 328 LRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAM 387
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF ++ P TY+ +L++ G+V+ + + SM AG+ P +Y LL L
Sbjct: 388 SIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNAGLRPGLSTYTALLTLL 447
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +D+ EM G D+ L+ + + G+++ SLR M IR +
Sbjct: 448 AHKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLSLRWLRFMSSSGIRTNN 506
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFE 267
++ R L ++ K G + A + E
Sbjct: 507 FIIRQLFESCMKNGLYESAKPLLE 530
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 132/263 (50%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC NV+ A+ L + +K I PN YN ++ + ++L D++
Sbjct: 246 IDALCNYKNVNDALNLFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ ++ AF+ + +E+++ + I + +I F ++++A
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + C P+++TYN ++ + RV + + F M + G+V + ++YNTL+ L
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ D+ F++M G+ PD++TY+ L+D + G +E++L +F +++ ++ P I
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
Y Y +I+ + K GKV+ +F
Sbjct: 485 YTYNIMIEGMCKAGKVEDGWDLF 507
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 133/271 (49%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC G S A RLL + ++ I PN ++ ++ A + + + ++ +++
Sbjct: 278 NSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R++ D Y++ F M D + E ++ +++ N +I F K+++
Sbjct: 337 --KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+ + +F + + +TYN ++ L + G + F M GV PD I+Y+
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 454
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K +L+ L+ F + +S ++PD+ TY +I+ + G +E+ LF + +
Sbjct: 455 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 514
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P++ +Y ++I + G + A +F EM
Sbjct: 515 VKPNVIIYTTMISGFCRKGLKEEADALFREM 545
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + + ++ + I+ +V + ++ K I+ AL + ++
Sbjct: 172 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 231
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + D++ Y ++D L VND LN F M G+ P+ ++YN+L+ L R
Sbjct: 232 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 291
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+++T++ALID+F + G + E+ +L+++M ++ I P I+ Y SLI
Sbjct: 292 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A +FE M S
Sbjct: 352 NGFCMHDRLDEAKHMFELMIS 372
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDL----- 59
+ LCK G++ A+ LL+ + I Y ++ A +++ + + ++
Sbjct: 211 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+V+ +L C N+ R D ++LL ++++ +++ + +I AF K
Sbjct: 271 RPNVVTYNSLIR-CLCNYGR----WSDASRLL---SDMIERKINPNVVTFSALIDAFVKE 322
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ +A ++D + PD+ TY+ +++ R+++ + F M P+ ++Y
Sbjct: 323 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 382
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NTL+ K +R++ + FREM + G+ + +TY LI + G+ + + ++F M
Sbjct: 383 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 442
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y L+D L K GK++ A+ +FE + S
Sbjct: 443 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 98/185 (52%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ + ++++ + + + N +I + +A+ + D + C+PDL TY V
Sbjct: 151 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 210
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
++ L + G ++ L+ M++ + D + Y T+++ L + ++ L F EM GI
Sbjct: 211 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+P+++TY +LI G ++ RL +DM +++I P++ + +LID K GK+ A
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 330
Query: 265 IFEEM 269
+++EM
Sbjct: 331 LYDEM 335
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 91/177 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+VQ SI+ N+++ A AK + + + + + ++ L+ DL +YNI+++ R
Sbjct: 54 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 113
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++ L M + G PD ++ ++LLN +R+ + +M +P+ +T+
Sbjct: 114 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 173
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI E++ L + M + +P ++ Y ++++ L K G +DLA+++ ++M
Sbjct: 174 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 83/165 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F + Q+ AL + + L +PD++T + +L+ R+++ + M
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
P+ +++NTL++ L + + M G +PDL TY +++ + G+I+
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+L L M++ +I + +Y ++ID L V+ A+ +F EM++
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 267
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 77/152 (50%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ +F + + P ++ +N +L + ++ + + +++ M+ + D SYN
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + +L L L +M + G +PD++T ++L++ + I E++ L + M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +P+ + +LI L K A+ + + M
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 195
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CK G+ AA++LLQ + D + PN Y+ ++ A + + ++ + ++ V
Sbjct: 171 INGVCKIGDTRAAIKLLQKI-DGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKG 229
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ F + + + + E+V ++ N ++ A K ++++A
Sbjct: 230 ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + KPD+ITY+ ++D V V + F +M GV PD +Y L+N
Sbjct: 290 SVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + +D L F+EM + + P ++TY++LID ++G I L ++M + ++
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANV 409
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLID L K G +D A+ +F +M
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKM 435
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 125/266 (46%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C G + A+ LL + K I PN YN ++ A + + + +L +L +
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTIN-PNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ + + + + + + + +I F K++ +++AL
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + P ++TY+ ++D L + GR+ + + M + G + I+Y++L++ L
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K LD + F +M + GI+P+ T+T L+D + G ++++ +F D+ + ++
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y +ID K G ++ A+T+ +M
Sbjct: 480 YTYNVMIDGHCKQGLLEEALTMLSKM 505
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 89/179 (49%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ ++++ P + +N +I Q++KAL D + + + ++Y +++ + +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G + + P+ + Y+T+++ L K + + F EM GI D++T
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ LI F G ++E++ L N+M + I P++Y Y L+D L K GKV A ++ M
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 87/167 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
II N+I+ +FAK + A+ + ++ +PDLIT NI+++ +G++ + A
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ + G PD ++ NTL+ L ++ L + ++ G + + ++Y LI+ + G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIG 178
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++L + + +P++ +Y ++ID L K V A +F EM
Sbjct: 179 DTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEM 225
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I +I Q+ KAL D + + + ++Y +++ + ++G +
Sbjct: 997 ITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRK 1056
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ PD + YNT+++ L K + + F EM GI D++TY LI F G
Sbjct: 1057 IDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGK 1116
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK--VDLAMTIFEEM 269
++E++ L N M + I P++ Y L+D L K GK +D ++++ +M
Sbjct: 1117 LKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKM 1164
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+KG++ PDL T NI+++ +G++ + A + + G PD I++ TL+N L +
Sbjct: 954 LKGIQ--PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQ 1011
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ L + ++ G + + ++Y LI+ + G+ +++L + + +P + +Y +
Sbjct: 1012 VNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNT 1071
Query: 249 LIDNLKKMGKVDLAMTIFEEMN 270
+ID L K V A +F EMN
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMN 1093
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 3/247 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V A +L + K P+ Y+ ++ ++ + + + +
Sbjct: 276 VDALCKEGKVKEAKSVLAVML-KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T YT F + L +E+ Q I+ + +I KS +I
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVW 394
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + ++ITY+ ++D L + G ++ + F MK+ G+ P+ ++ LL+ L
Sbjct: 395 DLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGL 454
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL F+++ G ++ TY +ID + G +EE+L + + M+ P
Sbjct: 455 CKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDA 514
Query: 244 YVYRSLI 250
+ +I
Sbjct: 515 VTFEIII 521
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 5/260 (1%)
Query: 14 NVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+ S AV L L K I P+ + N ++ I +F IL +L + +
Sbjct: 941 HYSTAVSLSHRLELKGI-QPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
T + + L F ++++ + + +I K A+ + I G
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
KPD++ YN ++D L + V+ F M G+ D ++YNTL+ + +L
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGN--IEESLRLFNDMKQQQIRPSIYVYRSL 249
+ +M I P++ TY L+D+ + G ++ESL + + M+ + + + +
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I L + + D + EM
Sbjct: 1180 ISALFEKDENDKVEKLLHEM 1199
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 77/158 (48%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ ++ A+ F+ + ++ P +I +N +LD ++ + ++ ++ G+ PD I+
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L+N + ++ ++ + G PD +T LI G ++++L + +
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
Q + + Y +LI+ + K+G A+ + ++++ L+
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLT 195
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G+ PD + N L+N + ++ ++ + G PD +T+T LI+ G + ++
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
L + + Q + + Y +LI+ + K+G A+ + +++ L+
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062
>gi|302796848|ref|XP_002980185.1| hypothetical protein SELMODRAFT_11844 [Selaginella moellendorffii]
gi|300151801|gb|EFJ18445.1| hypothetical protein SELMODRAFT_11844 [Selaginella moellendorffii]
Length = 370
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 10/263 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
+GYI K NV+ A RL + ++ LP +N + A+ ++D + + + +
Sbjct: 107 DGYI----KCHNVTGATRLFLEMLERGC-LPGEEIFNLLFGLHAKAGELDEAVNLFRKIA 161
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y F M ++ F E++ S + N ++ +K+ +
Sbjct: 162 ENGCQPTVKSYGMLLDTFAMVNNLEGAHAFYMELIGKNIYPSSVSCNSLLSRLSKAGKTT 221
Query: 121 KALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
AL F +K KP+ ITYNI +D+ G+ + + EF MK G P ++YNTL
Sbjct: 222 LALTFFREMKSFPGTKPNGITYNIAIDLFGKTAKFAEAWEEFLDMKRNGCSPSVVTYNTL 281
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L + ++LC + EM GI + TY LID R +E +L ++MK+
Sbjct: 282 IVRLGRGGYIELCFDLYEEMRGRGITANQFTYCGLIDVLTRYNQVEHALEFLDEMKRLHF 341
Query: 240 RPSIYVYRSLIDNLKKMGKVDLA 262
PS + +I +L K G DLA
Sbjct: 342 HPSFNTLQLVIKSLWKTG--DLA 362
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+P+S V N +I + +++A+ +F +K K DL TY I++D + V
Sbjct: 62 APDSY-VYNAVISSLCNVANMDEAMKVFSKMKD-KSTIDLFTYTILIDGYIKCHNVTGAT 119
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M E G +P +N L K LD + FR++ E+G +P + +Y L+D+F
Sbjct: 120 RLFLEMLERGCLPGEEIFNLLFGLHAKAGELDEAVNLFRKIAENGCQPTVKSYGMLLDTF 179
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
N+E + + ++ + I PS SL+ L K GK LA+T F EM S
Sbjct: 180 AMVNNLEGAHAFYMELIGKNIYPSSVSCNSLLSRLSKAGKTTLALTFFREMKS 232
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 113/268 (42%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC N+ A+++ ++DK+ Y ++ + +++ + ++ ++L
Sbjct: 69 NAVISSLCNVANMDEAMKVFSKMKDKSTIDLFTYTILIDGYIKCHNVTGATRLFLEMLER 128
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + + + + ++ + ++ ++ FA +E A
Sbjct: 129 GCLPGEEIFNLLFGLHAKAGELDEAVNLFRKIAENGCQPTVKSYGMLLDTFAMVNNLEGA 188
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLN 181
+ + G P ++ N +L L + G+ L F MK G P+ I+YN ++
Sbjct: 189 HAFYMELIGKNIYPSSVSCNSLLSRLSKAGKTTLALTFFREMKSFPGTKPNGITYNIAID 248
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K + F +M +G P ++TY LI GR G IE L+ +M+ + I
Sbjct: 249 LFGKTAKFAEAWEEFLDMKRNGCSPSVVTYNTLIVRLGRGGYIELCFDLYEEMRGRGITA 308
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + Y LID L + +V+ A+ +EM
Sbjct: 309 NQFTYCGLIDVLTRYNQVEHALEFLDEM 336
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + G V D L F+ M+ + P F Y +++ + + + + ++ + +G PD
Sbjct: 5 LFKGGYVEDALEVFSQMERSSSPPGFNEYKYVIDRMLRSECYLVVPVLYKGLMTAGHAPD 64
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
Y A+I S N++E++++F+ MK + ++ Y LID K V A +F
Sbjct: 65 SYVYNAVISSLCNVANMDEAMKVFSKMKDKST-IDLFTYTILIDGYIKCHNVTGATRLFL 123
Query: 268 EM 269
EM
Sbjct: 124 EM 125
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I KA + A R+L ++ + FLP+ YN ++ + +DL+ +I ++LL
Sbjct: 142 NALISGFIKANQLENANRVLDRMKSRG-FLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT A I+ + ++E++ + N II K ++
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA + + CKPD+ITYNI+L L G+ ++ + M G P+ ++++ L+
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + +++ + R M E G+KPD Y LI F R G ++ + M
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P I Y +++ L + GK D A+ +FE+++
Sbjct: 381 PDIVNYNTIMAGLCRTGKADQALEVFEKLD 410
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 127/272 (46%), Gaps = 9/272 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
IE G + A++LL + K + P+ YN ++ + +D +F++L+ L SS
Sbjct: 215 IEATILDGGIDVAMKLLDEMLSKGLE-PDTLTYNAIIRGMCKEMMVDKAFELLRSL--SS 271
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R D Y R + ++ I E++ I +++ + +I + ++E+
Sbjct: 272 RGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEE 331
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS-MKEAGVVPDFISYNTLL 180
A+ + +K KPD Y+ ++ R GR+ D+ EF M G +PD ++YNT++
Sbjct: 332 AVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRL-DLATEFLEYMISDGCLPDIVNYNTIM 390
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + + D L F ++ E G P++ +Y L + +G+ +L + + Q I
Sbjct: 391 AGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGID 450
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y SLI L + G VD A+ + +M S
Sbjct: 451 PDEITYNSLISCLCRDGMVDEAIELLVDMQSG 482
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 3/232 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ G V AV LL+S+++K + P+AY + ++ +DL+ + L+ ++
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGL-KPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y T Q L E++ ++ P ++ N + A S +AL
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRAL 438
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD ITYN ++ L R G V++ + M+ P+ +SYN +L L
Sbjct: 439 EMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGL 498
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
K+ R + + M E G +P+ TY LI+ G +G E++ L N +
Sbjct: 499 CKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLH 550
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L F+E +V +I+ ++I F SR I KA + + ++ KPD+ YN ++
Sbjct: 89 LYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISG 147
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ ++ + MK G +PD ++YN ++ + +LDL L F E+ + +P
Sbjct: 148 FIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPT 207
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++TYT LI++ G I+ +++L ++M + + P Y ++I + K VD A +
Sbjct: 208 VITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLR 267
Query: 268 EMNS 271
++S
Sbjct: 268 SLSS 271
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLN---NLRKIRRLDLCLIYFREMGESGIKP 206
R G+ N+ L M + G PD I L+ N R I + + G KP
Sbjct: 81 RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG----KP 136
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D+ Y ALI F + +E + R+ + MK + P + Y +I + GK+DLA+ IF
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196
Query: 267 EEM 269
EE+
Sbjct: 197 EEL 199
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G + A +L ++ K P+ YN ++ ++ + ++ ++
Sbjct: 272 IDALCKEGRILEAQGVL-AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV--K 328
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R L D Y + T + ++ +E+ +I N +I S +I
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D + G PD++TYNI++D L + GR+ + L M + GV P+ ++YN +++
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD 448
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+++ F M +SG++PD+L Y LI+ + +T ++E++ LF +M+ + + P
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I Y SLID L +G++ + +EM S
Sbjct: 509 DIASYNSLIDGLCNLGRIPHVQELLDEMCDS 539
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N +E C NV A L + + + P+ YN ++ +T +D + + K+L
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGL-EPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + + + + ++E+ A P ++ N +I A K +I
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + KP+++TYN ++D VN + F M ++G+ PD ++YN L+
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K +D ++ F+EM + PD+ +Y +LID G I L ++M
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y L+D K D A+++F ++
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQI 571
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC +G +S +LL + + P+ YN ++ A + I + +L ++
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHG-SAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + ++ +V+ I+ N +I + K+ ++
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD 492
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+A+++F ++ PD+ +YN ++D L GR+ V ++L+E M ++G PD I+YN
Sbjct: 493 EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE---MCDSGQSPDVITYN 549
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL+ K + D + FR++ E GI PD T A++D+ + ++ + +
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y LI+ L K G AM + +M
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSKM 640
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-ETNDIDLSFQILKDLLVSSRTLSSD 69
+ G+ A+ L L+ K I A +L+ + +F +L +L S +
Sbjct: 67 RMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLV 126
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
+ F + + L F + ++ +I +K+ QI+ AL + +
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
+ +P+L+ Y+ ++D L + G V+D L + + E G++ D ++YN+L++ + R
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246
Query: 190 ----DLCLIYFRE-------------------------------MGESGIKPDLLTYTAL 214
L RE M + G KPD++TY AL
Sbjct: 247 QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNAL 306
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + N+ E+ LFN M ++ + P + Y LID K VD AM +F+E+
Sbjct: 307 MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G + A+ +L + K + PN YN ++ N+++++ I ++ S
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGV-KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + T+ + ++ +E+ I N +I +I
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + PD+ITYNI+LD + + ++ F + E G+ PDF + + +++NL
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNL 589
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +L + + + G P++ TYT LI++ + G+ E++ L + M+ P
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +I L + + D A + EEM
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEM 675
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N II F + I KAL ++ D TY +++ L + G++ L+
Sbjct: 124 NLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLL 183
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+++ V P+ + Y+ L++ L K + L ++GE GI D +TY +LID
Sbjct: 184 QEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSV 243
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G +E +L M ++ + P Y + LID L K G++ A + M+
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 72/156 (46%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
R ++ A+ F+ + + P ++ +L + R+G ++ F ++ G+ P ++
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L+N + +SG +P+L+T+ +I+ F G I ++L ++
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Q + Y +LI+ L K G++ A+ + +EM S
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKS 189
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 139/274 (50%), Gaps = 8/274 (2%)
Query: 1 MCNG-YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILK 57
+C G I LCK G SAA++LL+ + D + PN YN ++ + + ++ +F +
Sbjct: 162 VCYGTLINGLCKVGQTSAALQLLRRV-DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 220
Query: 58 DLLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+++ S+ +S D Y+ F + + +++ + + ++ F K
Sbjct: 221 EMV--SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCK 278
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++++A + + KPD++TY ++D V +VN + F +M + GV + S
Sbjct: 279 EGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQS 338
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN ++N KI+++D + F+EM I PD++TY +LID ++G I +L+L ++M
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH 398
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + Y S++D L K +VD A+ + +M
Sbjct: 399 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKM 432
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 114/235 (48%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+N ++ ++ SF + ++L ++ T + + Q L F ++V
Sbjct: 93 TFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKV 152
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V + + + +I K Q AL + + G +P+++ YN ++D + +V V
Sbjct: 153 VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 212
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
N+ + ++ M G+ PD ++Y+ L++ + +L+ + F +M I PD+ T++ L
Sbjct: 213 NEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSIL 272
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+D F + G ++E+ + M +Q I+P + Y SL+D + +V+ A +IF M
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTM 327
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 92/166 (55%), Gaps = 6/166 (3%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCK---PDLITYNIVLDILGRVGRVNDMLNEFAS 163
N +I F K +++++A+ +F K + CK PD++TYN ++D L + G+++ L
Sbjct: 340 NIMINGFCKIKKVDEAMNLF---KEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE 396
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M + GV D I+YN++L+ L K ++D + +M + GI+PD+ TYT LID + G
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGR 456
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++ +F D+ + ++Y Y +I D A+ + +M
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKM 502
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLV-ASAETNDIDLSFQILKDLLVSSR 64
++ CK G V A +L + + I C L+ ++ + I +
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGV 332
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
T + Y F + + +E+ ++ N +I KS +I AL
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + D ITYN +LD L + +V+ + MK+ G+ PD +Y L++ L
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLC 452
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K RL F ++ G + TYT +I F +++L L + M+ P+
Sbjct: 453 KGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAK 512
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I +L + + D+A + EM
Sbjct: 513 TYEIIILSLFEKDENDMAEKLLREM 537
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 36/223 (16%)
Query: 83 DCTQLLIFIEEVVQIASPES-IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
+C Q I + ++ S ++ N +I F++ + +F +I +P+ IT
Sbjct: 70 NCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITL 129
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI----------RRLD- 190
++ L G+++ L+ + G + + Y TL+N L K+ RR+D
Sbjct: 130 TTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDG 189
Query: 191 ----------------LCLI--------YFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+C + + EM GI PD++TY+ALI F G + +
Sbjct: 190 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLND 249
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ LFN M ++I P +Y + L+D K G+V A + M
Sbjct: 250 AIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
DD L+ ++ I I +I+ + K + A+ + ++ DL+T+
Sbjct: 35 DDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTF 94
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS-------------------------- 175
NI+++ ++G + + FA++ + G P+ I+
Sbjct: 95 NILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVA 154
Query: 176 ---------YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
Y TL+N L K+ + L R + ++P+++ Y +IDS + + E
Sbjct: 155 LGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 214
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ L+++M + I P + Y +LI +GK++ A+ +F +M S
Sbjct: 215 AFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMIS 259
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN YI LCK + A+++++ +R K P+ Y V+ + + + +++
Sbjct: 266 CNIYIYYLCKQNRLPDALQMVEKMRTKGT-SPDVVTYQTVVSGLCDNKKFAEAIGLWEEM 324
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS-------PESIIVVNRIIFA 112
+ R L D ++ A F + + ++E ++AS S+ + N +I
Sbjct: 325 V--KRDLKPDVFSCGALIFGLCKNNK-----VDEAFELASRMLTLDIELSVCIYNALISG 377
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
F ++ I+KA I ++ C+PD++TYNI+L+ +G + M+ +GV PD
Sbjct: 378 FWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPD 437
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
SYN LL L K +LD + + E G D ++ LID+F +T ++ +L LF
Sbjct: 438 RYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFK 497
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+M + ++ Y +LI+ L +G +LA +FE+M
Sbjct: 498 EMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQM 534
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +AG++ A +++ +R N P+ YN +L ++ + ++++ +
Sbjct: 372 NALISGFWRAGSIDKAYKIISFMR-TNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKME 430
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + T + F+ + +++ + N +I AF K+++++
Sbjct: 431 TSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVK 490
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL +F + + D +TY +++ L VG N F M A + P+ YN +L
Sbjct: 491 SALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIML 550
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++L K+ F M + + PD +T+ LI G+ E+L LF DM+ + +
Sbjct: 551 HHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVE 610
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P ++ LI L GK LA ++E M
Sbjct: 611 PDTLTFKYLISGLLDEGKSTLAYEVWEYM 639
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 127/279 (45%), Gaps = 17/279 (6%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
C I LCK V A L + +I L YN ++ ID +++I+
Sbjct: 336 CGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKII---- 391
Query: 61 VSSRTLSSDCYTNFARAFIMTDD-CT-QLLIFIEEVVQIASPESI----IVVNRIIFAFA 114
S ++ C + I+ + CT ++ E++++ + N+++
Sbjct: 392 --SFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLC 449
Query: 115 KSRQIEKAL-LIFDHIK-GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K+ Q++KA + DH++ G C D ++ NI++D + +V L F M G+ D
Sbjct: 450 KTHQLDKAFAFVSDHMEVGGFC--DTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQAD 507
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++Y TL+N L + +L F +M + I P++ Y ++ + G+ + + +F+
Sbjct: 508 AVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFS 567
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M Q+++ P + +LI L K + A+ +F++M +
Sbjct: 568 HMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRT 606
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+R I A +S +IE + + L C PD+ NI + L + R+ D L M+
Sbjct: 232 SRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRT 291
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD ++Y T+++ L ++ + + EM + +KPD+ + ALI + ++E
Sbjct: 292 KGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDE 351
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ L + M I S+ +Y +LI + G +D A I M ++
Sbjct: 352 AFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTN 397
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ I N I+ K ++ AL + + ++ PD++TY V+ L + + +
Sbjct: 260 SPD-IWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAI 318
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ M + + PD S L+ L K ++D M I+ + Y ALI F
Sbjct: 319 GLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGF 378
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
R G+I+++ ++ + M+ P I Y L+++ +G ++ A + +M +S
Sbjct: 379 WRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETS 432
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG P TY+ + L + R+ + M + G PD + N + L K RL
Sbjct: 222 KGFCLTP--FTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRL 279
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L +M G PD++TY ++ E++ L+ +M ++ ++P ++ +L
Sbjct: 280 PDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGAL 339
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I L K KVD A + M
Sbjct: 340 IFGLCKNNKVDEAFELASRM 359
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 16/276 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA AV+LL +RDK PN YN ++ E +D + ++L+++ V
Sbjct: 119 VDGLCKAERTRDAVKLLDEMRDKGCS-PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y +F + D + F+ ++ ++ +I KS ++ A
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFL---ARMPVTPDVVSYTTVINGLCKSGDLDSAS 234
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ DH+ C PD++TY+ ++D + G V + SM + G P+ ++YN+LL L
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS- 242
++ + EM G PD+++Y A ID + ++++ +F+ M ++ P+
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354
Query: 243 ---------IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I +Y L+D L K G+ D A +F ++
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKV 390
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 97/199 (48%), Gaps = 3/199 (1%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + D Q F+ E+V+ +++ I+ K+ + A+ + D ++
Sbjct: 80 YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMR 139
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C P++ TYN++++ L ++++ M G PD ++YN+ + L K R+D
Sbjct: 140 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD 199
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ M + PD+++YT +I+ ++G+++ + R+ + M + P + Y SLI
Sbjct: 200 EARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLI 256
Query: 251 DNLKKMGKVDLAMTIFEEM 269
D K G+V+ AM + + M
Sbjct: 257 DGFCKGGEVERAMGLLDSM 275
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++ N+++ + + +KA +F + C+PD T+ I+L L R ++
Sbjct: 5 HNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKL 64
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
MKE G VPD YN L++ K + + EM ++ P ++TYT ++D +
Sbjct: 65 LGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCK 124
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++L ++M+ + P+IY Y +++ L + K+D A + EEM
Sbjct: 125 AERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEM 173
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 34/270 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCKA V A + + ++ PNA Y+ ++V DI L +L L
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGC-TPNASSYSMLIV------DILLYTVLLDGLC 375
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R F A C ++E +I P+ + N ++ + K RQI+
Sbjct: 376 KGGR---------FDEA------CALFSKVLDE--KICEPD-VFFYNVMLDSHCKRRQID 417
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL I + C +++T+NI++ L R++D +M + G +PDF++Y TL+
Sbjct: 418 KALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 476
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + K + L F E + G PD++TY+ALI EE+ LF + +++
Sbjct: 477 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWV 536
Query: 241 PS------IYVYRSLIDNLKKMGKVDLAMT 264
P ++ L++ +K VDL +T
Sbjct: 537 PDDKTLGLLHRKLKLLNKPRKAEVVDLYLT 566
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + + P++ ++ +S Q+EKA + +K + C PD YN ++
Sbjct: 29 VFQEMIDKSCQPDAFTFAI-LLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGY 87
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ A M + +P ++Y +++ L K R + EM + G P++
Sbjct: 88 SKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNI 147
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY +++ ++E+ ++ +M + P + Y S I L K +VD A
Sbjct: 148 YTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLAR 207
Query: 269 M 269
M
Sbjct: 208 M 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 125/311 (40%), Gaps = 48/311 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK+G++ +A R+L + ++ P+ Y+ ++ + +++ + +L +L
Sbjct: 221 INGLCKSGDLDSASRMLDHMSNRGC-TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 279
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + A + + E+ + ++ N I K+ +++KA
Sbjct: 280 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 339
Query: 124 LIFDHIKGLKCKP----------DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV-PD 172
+FD + C P D++ Y ++LD L + GR ++ F+ + + + PD
Sbjct: 340 AVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 399
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGE------------------------------- 201
YN +L++ K R++D L ++M E
Sbjct: 400 VFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLT 459
Query: 202 ---SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
G PD +TY L+D+ + G +L LF + + P + Y +LI L
Sbjct: 460 MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENM 519
Query: 259 VDLAMTIFEEM 269
+ A +F ++
Sbjct: 520 AEEAYLLFTKL 530
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%)
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G + +YN LL L + R D F+EM + +PD T+ L+ R+ +E++
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L MK+ P +Y +LI K A EM
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 103
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 132/270 (48%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L + G+ L + ++ LP+ Y+ ++ A + D + + ++
Sbjct: 198 NSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMK 257
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT + + L ++E+ + ++ +I K+ ++E
Sbjct: 258 ENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVE 317
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IF ++ CKPD++ N ++++LG+ GR+ D + F M+ P+ ++YNT++
Sbjct: 318 EAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVI 377
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R +++ +M E+G+ P TY+ LID F +T +E++L L +M ++
Sbjct: 378 KALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGF 437
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI+ L K + + A +F+E+
Sbjct: 438 APCPAAYCSLINALGKAKRYEAANELFQEL 467
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 134/275 (48%), Gaps = 10/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA----SAETNDIDLSFQIL 56
N I L KAG ++ A++L + + PN YN V+ A A ++ L ++ +
Sbjct: 339 NNLINLLGKAGRLADAIKLFEEMESLQC-TPNVVTYNTVIKALFESKARASEAFLWYEKM 397
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K+ + SS Y+ F T+ + L+ +EE+ + +I A K+
Sbjct: 398 KE---NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKA 454
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ E A +F ++ Y +++ LG+ GR+++ ++ F MK+ G PD +Y
Sbjct: 455 KRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAY 514
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ + ++ D R M E+G PDL ++ +++ F RTG + ++ +F MK
Sbjct: 515 NALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKN 574
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+I+P + Y +++ L + G + A + +EMNS
Sbjct: 575 SKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNS 609
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFA 162
++ I+ K++ + KAL IF IKG KCKP TYN ++ +L G +V+++ NE
Sbjct: 162 LSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMC 221
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ E +PD ++Y+ L+ K+ R D + F EM E+G+ P YT ++ + + G
Sbjct: 222 N--EGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++L L +MK++ ++Y Y LI + K GKV+ A +IF M
Sbjct: 280 RVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNM 326
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 43/312 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I K G +A+ L +++ N P A Y +L + ++ + +++++
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKE-NGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKG 295
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
L+ YT + + IF+ + + P+ ++++N +I K+ ++ A
Sbjct: 296 CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPD-VVLINNLINLLGKAGRLADA 354
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDIL-GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ +F+ ++ L+C P+++TYN V+ L R ++ + MKE GVVP +Y+ L++
Sbjct: 355 IKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILID 414
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT-------------------- 221
K R++ L+ EM E G P Y +LI++ G+
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYS 474
Query: 222 ---------------GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
G + E++ LFN+MK+ P +Y Y +L+ + ++G D A ++
Sbjct: 475 SARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLL 534
Query: 267 EEM--NSSLSDL 276
M N DL
Sbjct: 535 RTMEENGCTPDL 546
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK V A+ LL+ + +K P AY ++ A + + + ++ ++L
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL----- 467
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+C + AR + + +I K ++ +A+
Sbjct: 468 --RENCGYSSARVYAV----------------------------MIKHLGKCGRLSEAVD 497
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ +K L C PD+ YN ++ + RVG ++ + +M+E G PD S+N +LN
Sbjct: 498 LFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFA 557
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ + F M S IKPD+++Y ++ R G EE+ +L +M + +
Sbjct: 558 RTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLI 617
Query: 245 VYRSLIDNLKKMGKVD 260
Y S+ L+ +GK+D
Sbjct: 618 TYSSI---LEAVGKID 630
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I AF K + + A+ +FD +K P Y +L I ++GRV L
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MKE G +Y L+ + K +++ F M + G KPD++ LI+ G+ G
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
+ ++++LF +M+ Q P++ Y ++I L + + A +E+M +
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKEN 400
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D TY ++ L G + +M M + V + ++ L K + ++ L F
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSLIDNLKK 255
++ KP TY ++I + G+ E+ L+N+M + P Y +LI K
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242
Query: 256 MGKVDLAMTIFEEMNSS 272
+G+ D A+++F+EM +
Sbjct: 243 LGRDDSAISLFDEMKEN 259
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 129/271 (47%), Gaps = 8/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G + A + + ++PN YN ++ + + ++ + +++ ++
Sbjct: 188 IDGLCKCGQIDEACSVFDDMIAGG-YVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF-----AFAKSRQ 118
T Y+ AF + L + + +++V +++ F K+
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
E+A +F+ + +PD++T+ ++D L + G+V + M GV P+ ++YN
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ L K R++ + EM SG PD +TY +L+ + R +++L+L +++K
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y L+D L K GK + A+T+ EEM
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 138/284 (48%), Gaps = 24/284 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK+ ++ A + L + L ++ P+ YN ++ + + D++ + ++ D+
Sbjct: 41 NTIINGLCKSNDLGAGMELFEELVERG-HHPDVVTYNTLIDSLCKAGDLEEARRLHGDM- 98
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE--EVVQIASPES------IIVVNRIIFA 112
SSR C N ++ + ++ E E++Q + +S II N +
Sbjct: 99 -SSR----GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDG 153
Query: 113 FAKSRQIEKALLIFDHIK--GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K +A + ++ L+ PD +T++ ++D L + G++++ + F M G V
Sbjct: 154 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 213
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ I+YN L+N L K +++ M + G+ PD++TY+ L+D+F + ++E+L L
Sbjct: 214 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 273
Query: 231 FNDMKQQQIRPSIYV-----YRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + P++ V + LI K G + A +FEEM
Sbjct: 274 LHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEM 317
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 141 YNIVLDILGRVGRVNDMLNEF-ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
YNIVL L R G L F M GV P ++YNT++N L K L + F E+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
E G PD++TY LIDS + G++EE+ RL DM + P++ Y LI+ L K+G++
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 260 DLAMTIFEEMNSSLSDL 276
D A + +EM D+
Sbjct: 124 DEARELIQEMTRKSCDV 140
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
++ CKA V A+ LL + + N+ +P+ +N ++ + + + + + + +++
Sbjct: 258 VDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEM 317
Query: 60 LVSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ ++ L D T A ++ + + P +++ N ++ KS
Sbjct: 318 V--AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+IE+A + + C PD ITY ++ L R R +D L + +K G PD ++YN
Sbjct: 376 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 435
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L K + + + EM G +PD T+ A R+GN+ ++ L + +
Sbjct: 436 ILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAK 495
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ P S++D + + GK+D + +E
Sbjct: 496 GMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
D L IF E+ + +I+ N II KS + + +F+ + PD++TY
Sbjct: 16 DTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTY 75
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N ++D L + G + + M G VP+ ++Y+ L+N L K+ R+D +EM
Sbjct: 76 NTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR 135
Query: 202 SG--IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR--PSIYVYRSLIDNLKKMG 257
+ P+++TY + +D + E+ L ++ +R P + +LID L K G
Sbjct: 136 KSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 195
Query: 258 KVDLAMTIFEEM 269
++D A ++F++M
Sbjct: 196 QIDEACSVFDDM 207
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 121/272 (44%), Gaps = 6/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+AG+ + A+ + + ++ P YN ++ ++ND+ ++ ++L+
Sbjct: 8 LQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERG 67
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + D + ++ +++ + +I K +I++A
Sbjct: 68 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAR 127
Query: 124 LIFDHIKGLKCK--PDLITYNIVLDILGRVGRVNDMLNEFASMKEAG--VVPDFISYNTL 179
+ + C P++ITYN LD L + + S+++ V PD ++++TL
Sbjct: 128 ELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTL 187
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K ++D F +M G P+++TY AL++ + +E + + M + +
Sbjct: 188 IDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGV 247
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y L+D K +VD A+ + M S
Sbjct: 248 TPDVITYSVLVDAFCKASRVDEALELLHGMAS 279
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK V+ A + + K I PN Y ++ ++ + ++L D++
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGI-RPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y+ AF+ + EE+V+++ I+ + ++ +I+
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRID 312
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + C D+++YN +++ + RV D + F M + G+V + ++YNTL+
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +D +F +M GI PD+ TY L+ G +E++L +F DM+++++
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
I Y ++I + K GKV+ A ++F
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 137/273 (50%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ C+ VS AV L+ + + + P+ AYN ++ + +T ++ +F K++
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + + + ++++ ++I + ++ AF K+ ++ +A
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + + PD++TY+ +++ L R+++ F M G + D +SYNTL+N
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +R++ + FREM + G+ + +TY LI F + G+++++ F+ M I P I
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ Y L+ L G+++ A+ IFE+M DL
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 94/163 (57%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F Q+ AL I + L +PD +T +++ R RV+D ++ M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD ++YN ++++L K +R++ +F+E+ GI+P+++TYTAL++ + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ RL +DM +++I P++ Y +L+D K GKV A +FEEM
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 91/168 (54%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + ++ F + ++ A+ + D + + KPD++ YN ++D L + RVND + F
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ G+ P+ ++Y L+N L R +M + I P+++TY+AL+D+F + G
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ E+ LF +M + I P I Y SL++ L ++D A +F+ M S
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVS 323
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC + S A RLL + K I PN Y+ +L A + + + ++ ++++ S
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKI-TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y++ + D + + +V ++ N +I F K++++E +
Sbjct: 291 IDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + + +TYN ++ + G V+ F+ M G+ PD +YN LL L
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
L+ L+ F +M + + D++TYT +I +TG +EE+ LF + + ++P I
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +++ L G + ++ +M
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 89/168 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ NR++ A K ++ + + + ++ L + DL T+NIV++ +V+ L+
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G PD ++ +L+N + R+ + +M E G KPD++ Y A+IDS +T
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ F +++++ IRP++ Y +L++ L + A + +M
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 58 DLLVSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
DL+VS L+ Y F + E+ Q + + N +I F ++
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++KA F + PD+ TYNI+L L G + L F M++ + D ++Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
T++ + K +++ F + G+KPD++TYT ++ G + E L+ MKQ
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 237 QQI 239
+ +
Sbjct: 499 EGL 501
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 72/134 (53%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P ++ +N +L + ++ + + +++ M+ G+ D ++N ++N ++ L L
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+M + G +PD +T +L++ F R + +++ L + M + +P I Y ++ID+L K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 256 MGKVDLAMTIFEEM 269
+V+ A F+E+
Sbjct: 203 TKRVNDAFDFFKEI 216
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I CKA V ++L + + + + YN ++ + D+D + + +
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + + L+ E++ + I+ +I K+ ++E+
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 122 ALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
A +F + KGLK PD++TY ++ L G ++++ + MK+ G++ +
Sbjct: 454 AWSLFCSLSLKGLK--PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 96/167 (57%), Gaps = 5/167 (2%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFA 162
++ I+ + + + KAL IF +KG KC+P TYN V+ +L G +V+++ NE
Sbjct: 163 LSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMC 222
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
S E PD ++Y+ L++ K+ R D + F EM E+G++P YT L+ + + G
Sbjct: 223 S--EGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLG 280
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+EE+L L ++M+ ++ P++Y Y LI L K G+V+ A +++ M
Sbjct: 281 KVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNM 327
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 12/276 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA-----SAETNDIDLSFQI 55
N I L ++ + AV L + +R N PN YN ++ + + + ++
Sbjct: 340 NNLINILGRSDRLKEAVELFEEMRLLNC-TPNVVTYNTIIKSLFEDKAPPSEASSWLERM 398
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
KD +V S S Y+ F T+ + L+ +EE+ + P +I + K
Sbjct: 399 KKDGVVPS----SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGK 454
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+++ E A +F +K + Y +++ G+ GR N+ + F MK+ G +PD +
Sbjct: 455 AKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYA 514
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN L+ + + +D FR M E+G PD+ ++ +++ RTG + ++ +F MK
Sbjct: 515 YNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMK 574
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I+P Y +++ L + G + A + +EMNS
Sbjct: 575 SSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNS 610
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L + G+ L + + P+ Y+ ++ A + N D + ++ ++
Sbjct: 199 NSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMK 258
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT + + L + E+ ++ +I KS ++E
Sbjct: 259 ENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVE 318
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A ++ ++ CKPD++ N +++ILGR R+ + + F M+ P+ ++YNT++
Sbjct: 319 DAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTII 378
Query: 181 NNLRKIRR-LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+L + + + M + G+ P TY+ LID F +T +E++L L +M ++
Sbjct: 379 KSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGF 438
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y SLI++L K + + A +F+E+ +
Sbjct: 439 PPCPAAYCSLINSLGKAKRYEAANELFQELKEN 471
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 17 AAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNF 74
+AVRL +++ N P A Y ++ + ++ + ++ ++ + + YT
Sbjct: 249 SAVRLFDEMKE-NGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTEL 307
Query: 75 ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKC 134
R + + +++ ++++N +I +S ++++A+ +F+ ++ L C
Sbjct: 308 IRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNC 367
Query: 135 KPDLITYN-IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
P+++TYN I+ + ++ + MK+ GVVP +Y+ L++ K R++ L
Sbjct: 368 TPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKAL 427
Query: 194 IYFREMGESGIKPDLLTYTALIDS-----------------------------------F 218
+ EM E G P Y +LI+S F
Sbjct: 428 LLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHF 487
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G+ G E++ LFN+MK+ P +Y Y +LI + + +D A ++F M +
Sbjct: 488 GKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEEN 541
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK V A+ LL+ + +K P AY ++ + + + + ++ ++L +
Sbjct: 414 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCG 473
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ S Y + F + + E+ ++ + N +I ++ +++A
Sbjct: 474 SSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFS 533
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F ++ C PD+ ++NI+L+ L R G + FA MK + + PD +SYNT+L L
Sbjct: 534 LFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLS 593
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ + +EM G + DL+TY++++++ G+
Sbjct: 594 RAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGK 629
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E+ + S+ V +I F K + +A+ +F+ +K L C PD+ YN ++ +
Sbjct: 464 LFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMV 523
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R +++ + F +M+E G PD S+N +LN L + + F +M S IKPD +
Sbjct: 524 RADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAV 583
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+Y ++ R G EE+ +L +M + + Y S+ L+ +GKVD
Sbjct: 584 SYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSI---LEAVGKVD 631
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K+ ++EKALL+ + + P Y +++ LG+ R F +KE
Sbjct: 413 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENC 472
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
Y ++ + K R + + F EM + G PD+ Y ALI R ++E+
Sbjct: 473 GSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAF 532
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF M++ P I + +++ L + G AM +F +M SS
Sbjct: 533 SLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSS 576
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL-RDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
N I LCK+GN+ A LL+ + R P+ YN ++ A + I + + +
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKM 195
Query: 60 LVSSRTLSSDCYT-NFARAFIMTDDCTQLLIFIEEVVQIASP-ESIIVVNRIIFAFAKSR 117
+ ++ D T N + I D + + I + +++A P +I N II A +
Sbjct: 196 KAAG--INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG 253
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A I +K + C PDL+T+N +LD + G + L M ++PD I+Y
Sbjct: 254 KVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N L ++ ++ + E+ G PD++ YT+L+D ++G IEE+ +L +M +
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
R + +Y SL+ + G V A I EM S
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS 404
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 135/280 (48%), Gaps = 6/280 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CKAG + A+ +L+ + +NI LP+ Y ++ + ++F +L++++
Sbjct: 275 NTLLDGFCKAGMLPRALEVLEEMCRENI-LPDVITYTILVNGLCRVGQVQVAFYLLEEIV 333
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
YT+ + + + ++E+ +++ + ++ + ++ +
Sbjct: 334 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVH 393
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA I + + P L TYNIVL L + G ++ ++ + + G VPD ++YNTL+
Sbjct: 394 KAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLI 453
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R+ EM G P+ +T +++ R G ++++ L +M +++
Sbjct: 454 DGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA 513
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS---SLSDLA 277
P++ VY SLID L K ++D A + + M +L D A
Sbjct: 514 PNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFA 553
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 117/242 (48%), Gaps = 4/242 (1%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
++YN +L ++ + ++ KDLL S + + + R + L F+
Sbjct: 28 HSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRA 87
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG- 152
+ + + + + N +I K ++A+ +F++++ + KP+++TYN V+ L + G
Sbjct: 88 LDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGN 147
Query: 153 --RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ ++L E K PD ++YNTL+N + R+ + +M +GI PD+LT
Sbjct: 148 LEKARELLEEMIR-KGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLT 206
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
L+ + G++EE+L + + MK P + Y S+I L GKV A I + M+
Sbjct: 207 CNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS 266
Query: 271 SS 272
S
Sbjct: 267 CS 268
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+ G V A LL+ + + ++P+ AY ++ ++ +I+ + +++K++ V
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQG-YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG 371
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y++ + + + + E+V I + N ++ K I KA+
Sbjct: 372 CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV 431
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD++TYN ++D L + RV + + M G P+ ++ +++ L
Sbjct: 432 SLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGL 491
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ R+D EM P+++ YT+LID ++ ++++ + + M+ Q +
Sbjct: 492 CRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDD 551
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ YR LI ++ G+V AM +++EM
Sbjct: 552 FAYRKLIVSMSHGGRVAEAMAMYDEM 577
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 124/269 (46%), Gaps = 6/269 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N I +A + A + ++ I P+ C ++ S + D++ + +IL +
Sbjct: 173 NTLINAFYRASRIREACAFREKMKAAGIN-PDVLTCNILVSGICKDGDVEEALEILDGMK 231
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y + A + + ++ + SP+ ++ N ++ F K+ +
Sbjct: 232 LAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS--CSPD-LVTFNTLLDGFCKAGMLP 288
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + + PD+ITY I+++ L RVG+V + G +PD I+Y +L+
Sbjct: 289 RALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 348
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ +EM G + ++ Y++L+ + R GN+ ++ + +M +
Sbjct: 349 DGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMV 408
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P ++ Y ++ L K G + A+++ ++
Sbjct: 409 PPLFTYNIVLGGLIKDGSISKAVSLISDL 437
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
K D+ +YN +LDIL + G + + +G P+ +++ L+ K + L
Sbjct: 24 KHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALE 83
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+ R + E + PD+ + LI + GN +++++LF +M+ +++P I Y ++I L
Sbjct: 84 FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLC 143
Query: 255 KMGKVDLAMTIFEEM 269
K G ++ A + EEM
Sbjct: 144 KSGNLEKARELLEEM 158
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 106/245 (43%), Gaps = 1/245 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LCK+G + A +L++ + + Y+ ++ ++ + +IL +++ +
Sbjct: 348 VDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
Y I ++ + I ++V ++ N +I K+ ++ +A
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + C P+ +T V+ L RVGRV+D + M P+ + Y +L++ L
Sbjct: 468 LADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 527
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K R+D + M G+ D Y LI S G + E++ ++++M + P
Sbjct: 528 KSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGS 587
Query: 245 VYRSL 249
++L
Sbjct: 588 TSKTL 592
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 127/246 (51%), Gaps = 11/246 (4%)
Query: 33 PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN YN ++ A ++ + ++ D+ + ++ Y AF + L
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE----LDG 63
Query: 91 IEEVVQIASPES-----IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
E VV + E ++ N ++ K+ ++E A +FD + PD+++YN +L
Sbjct: 64 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 123
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+VG +++ L F+ M + G+VPD +++ +L++ K L+ + +M E G++
Sbjct: 124 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 183
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
+ +T+TALID F + G ++++L +M++ I+PS+ Y +LI+ K+G++DLA +
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243
Query: 266 FEEMNS 271
EM +
Sbjct: 244 IREMEA 249
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 125/261 (47%), Gaps = 34/261 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I CKAGN+ AV L+ +R++ + + +++F L D
Sbjct: 158 IHATCKAGNLEQAVALVAQMRERGLRMN----------------EVTFTALID------- 194
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
F + + D L+ +EE+ + S++ N +I + K +++ A +
Sbjct: 195 -------GFCKKGFLDD----ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ + KPD++TY+ ++ +VG ++ M + GV+PD I+Y++L+ L +
Sbjct: 244 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 303
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+RL+ F M + G++PD TYT LID + GN+E++L L ++M ++ + P +
Sbjct: 304 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 363
Query: 246 YRSLIDNLKKMGKVDLAMTIF 266
Y LI+ L K + A +
Sbjct: 364 YSVLINGLSKSARTKEAHRLL 384
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 126/269 (46%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C+AG + A R++ +R++ PN +N ++ + ++ + ++ +++
Sbjct: 49 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 108
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + L E+ Q ++ +I A K+ +E
Sbjct: 109 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 168
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + ++ + + +T+ ++D + G ++D L M++ G+ P + YN L+
Sbjct: 169 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 228
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K+ R+DL REM +KPD++TY+ +I + + GN++ + +L M ++ +
Sbjct: 229 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 288
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI L + +++ A +FE M
Sbjct: 289 PDAITYSSLIRGLCEEKRLNDACELFENM 317
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKAG + A ++ + + + P+ +YN +L + + S + ++
Sbjct: 85 NSMVNGLCKAGRMEGARKVFDEMVREGL-APDVVSYNTLLSGYCKVGCLHESLAVFSEM- 142
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R L D +T+ A + Q + + ++ + + + +I F K
Sbjct: 143 -TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ ALL + ++ +P ++ YN +++ ++GR++ M+ V PD ++Y+T
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K+ LD ++M + G+ PD +TY++LI + ++ LF +M Q
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P + Y +LID K G V+ A+++ +EM
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M GV P+ +YN L+ L RL+ + +M +G P+ +TY L+ +F R G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 224 IEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + R+ + M+++ +P++ + S+++ L K G+++ A +F+EM
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 107
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 108/274 (39%), Gaps = 18/274 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + A L++ + K + P+ Y+ ++ + ++D +FQ+ + +L
Sbjct: 225 NALINGYCKLGRMDLARELIREMEAKRV-KPDVVTYSTIISGYCKVGNLDSAFQLNQKML 283
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ R E ++Q+ +I K +E
Sbjct: 284 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 343
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL + D + PD++TY+++++ L + R + + VPD I Y+ L+
Sbjct: 344 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403
Query: 181 -----NNLRKIRRL--DLCLI--------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ + L C+ ++ M + K D Y+ LI R GN+
Sbjct: 404 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 463
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
++L M + P+ SL+ L + G V
Sbjct: 464 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 497
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 11/272 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LC+AG + + L + +R+ + + V++ + ND +L DL R
Sbjct: 291 IHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM---DLFNEMRE 347
Query: 66 LSSDCYTNFARAFIMTDD-CTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S C N +M D C + + + E+++ S++ N +I + + +I
Sbjct: 348 RS--CEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRI 405
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E AL I ++ C+P+ TYN ++ + V+ + + M E+ + P ++YN+L
Sbjct: 406 EAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSL 465
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K D + E+G+ PD TY+ ID+ ++ +EE+ LFN +K++ I
Sbjct: 466 IHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGI 525
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + +Y +LID K GK+D A+++ E M+S
Sbjct: 526 KANEVMYTALIDGHCKAGKIDEAISLLERMHS 557
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F+K + + KA+ + + K P L+TYN ++ + + G + +KE
Sbjct: 428 NELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKE 487
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+VPD +Y+ ++ L K +R++ F + E GIK + + YTALID + G I+E
Sbjct: 488 NGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDE 547
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ L M + P+ Y SLI + K GKV +++ E M+
Sbjct: 548 AISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ +CK + + R+L + +K + +P+ YN ++ E I+ + +IL + ++
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGL-VPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F + + + ++++ S++ N +I K+ + A
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAY 479
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D +K PD TY++ +D L + R+ + + F S+KE G+ + + Y L++
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D + M P+ TY +LI + G ++E L + +M + ++P++
Sbjct: 540 CKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTV 599
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI+ + + G D A +F +M S
Sbjct: 600 ATYTILIEEMLREGDFDHANRVFNQMVS 627
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I CKAG+ +A +LL L++ N +P+ + ++ + D L
Sbjct: 463 NSLIHVQCKAGHFDSAYKLLDLLKE-NGLVPDQW---------------TYSVFIDTLCK 506
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S+ + C + + + I EV+ A +I K+ +I++A
Sbjct: 507 SKRMEEAC--------DLFNSLKEKGIKANEVMYTA----------LIDGHCKAGKIDEA 548
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + + + C P+ TYN ++ + + G+V + L+ +M + GV P +Y L+
Sbjct: 549 ISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEE 608
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ + D F +M G KPD+ TYTA I ++ +GN++E+ + M + + P
Sbjct: 609 MLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPD 668
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
Y LI +++G A + + M + D + P
Sbjct: 669 SLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHP 705
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II ++ +I++ + +F ++ C P + TY +++ L R + ++ F M+E
Sbjct: 290 IIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERS 349
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ +Y +++ + K R+LD EM E G+ P ++TY ALI + G IE +L
Sbjct: 350 CEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAAL 409
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M+ RP+ Y LI K V AMT+ +M
Sbjct: 410 EILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKM 450
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + E ++I+ ++ + V+ I F RQ+ + +K K + +YN +L +
Sbjct: 135 LFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRD------DNDIKFKLSVRSYNELLMM 188
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L R +++M + M +VP+ + NT++N K+ + +Y ++ ++G+ PD
Sbjct: 189 LARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPD 248
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
TYT+LI + R ++ + ++FN M + R + Y ++I L + G++D +++F+
Sbjct: 249 SFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFK 308
Query: 268 EM 269
+M
Sbjct: 309 KM 310
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 98/247 (39%), Gaps = 36/247 (14%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSS 63
+I+ LCK+ + A L SL++K I Y ++ + ID + +L+
Sbjct: 500 FIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLE------ 553
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R S DC N + N +I+ K ++++ L
Sbjct: 554 RMHSEDCLPNSS-----------------------------TYNSLIYGVCKEGKVQEGL 584
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ +++ + KP + TY I+++ + R G + F M G PD +Y ++
Sbjct: 585 SMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTY 644
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ M E+G+ PD LTYT LI ++ R G ++ + M PS
Sbjct: 645 CTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSH 704
Query: 244 YVYRSLI 250
++ +LI
Sbjct: 705 PIWNNLI 711
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 93/163 (57%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F + I++A+ + + C PD++TYNI+L L + G+V+D + + +
Sbjct: 350 NPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 409
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G P ISYNT+++ L K+ + +L + EM G+KPDL+T T+++ R G + E
Sbjct: 410 KGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHE 469
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ F+ +K I+P+ ++Y S++ L K + LA+ +M
Sbjct: 470 AIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDM 512
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 133/310 (42%), Gaps = 53/310 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I CK+G + A+R+L D PNA Y+ VL + + + + Q+L
Sbjct: 143 NVLINAYCKSGEIEEALRVL----DHTSVAPNAATYDAVLCSLCDRGKLKQAMQVL---- 194
Query: 61 VSSRTLSSDCYTNFARAFIMTD------DCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
R L S CY + ++ D Q + E+ ++ N +I F
Sbjct: 195 --DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFC 252
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K ++++A++ + C+ D+I++N++L L GR D + A+M G P +
Sbjct: 253 KEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVV 312
Query: 175 SYNTLLN-------------------------NLRKI----------RRLDLCLIYFREM 199
++N L+N N R + +D + + M
Sbjct: 313 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIM 372
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G PD++TY L+ + + G +++++ + + + + PS+ Y ++ID L K+GK
Sbjct: 373 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 432
Query: 260 DLAMTIFEEM 269
+LA+ + EEM
Sbjct: 433 ELAVELLEEM 442
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 117/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC G A++LL ++ K F P+ +N ++ + + + +L+ +
Sbjct: 280 NMILRSLCSGGRWMDAMKLLATMLRKGCF-PSVVTFNILINFLCQKGLLGKALNVLEMMP 338
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T +S + + F + + +E +V I+ N ++ A K +++
Sbjct: 339 KHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVD 398
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A++I + C P LI+YN V+D L +VG+ + M G+ PD I+ +++
Sbjct: 399 DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVV 458
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + ++ + +F + GIKP+ Y +++ + ++ DM +
Sbjct: 459 GGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCK 518
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y +LI + G + A + E+ S
Sbjct: 519 PTEASYTTLIKGITYEGLAEEASKLSNELYS 549
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+E + ++ +I F K + + A I ++ D +YN++++
Sbjct: 91 FLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYC 150
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G + + L + V P+ +Y+ +L +L +L + +S PD++
Sbjct: 151 KSGEIEEALR---VLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVV 207
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T T LID+ + + ++++LFN+M+ + +P + Y LI K G++D A+ +++
Sbjct: 208 TCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKL 267
Query: 270 NS 271
S
Sbjct: 268 PS 269
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 54/306 (17%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
CK G + A+ + +NI P+A YN ++ ND D + + LK++ + R +
Sbjct: 205 FCKTGRLKDALEIF-----RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEM--NERKV 257
Query: 67 SSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ D +T +A TD +++L E+V + N I+ K+ + E
Sbjct: 258 APDVFTYNILIDGLCKAS-KTDKASEML---HEMVDRGVTPDTVTFNSIMDGLCKAGKFE 313
Query: 121 KALLIFDHIKGLKCKP-----------------------------------DLITYNIVL 145
+A + + C+P D++TY+I+
Sbjct: 314 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILA 373
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
D L + GR+++ M G P+ ++YNTL++ L K + + + SG
Sbjct: 374 DGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFV 433
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD++TYT ++D + G ++++L++ M ++ PS+ Y +L++ L + G+VD A I
Sbjct: 434 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 493
Query: 266 FEEMNS 271
F+EM S
Sbjct: 494 FKEMVS 499
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 127/303 (41%), Gaps = 34/303 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N +++ L + G+ + + + D + P++Y LV + + N ID +F +L
Sbjct: 129 NCFLQTLLENGSSDRIPAMFERMLDAG-YAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAK 187
Query: 61 VSSRTLSSDCYTNFARAFIMT-------------------------------DDCTQLLI 89
V YT RAF T +DC L
Sbjct: 188 VRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALE 247
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F++E+ + + N +I K+ + +KA + + PD +T+N ++D L
Sbjct: 248 FLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLC 307
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+ + A M E P +YNTL++ L K + +D E SG PD++
Sbjct: 308 KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVV 367
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ L D + G I+E+ L +M + P++ Y +LID L K K + A + E +
Sbjct: 368 TYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESL 427
Query: 270 NSS 272
SS
Sbjct: 428 VSS 430
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 125/269 (46%), Gaps = 6/269 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCKAG A LL + ++N P+ YN ++ + ++D + ++ + +
Sbjct: 300 NSIMDGLCKAGKFERAHSLLAVMAERNC-RPSCCTYNTLISGLCKQQNVDRAKDLVDEFV 358
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y+ A + ++E+ +++ N +I K+ + E
Sbjct: 359 SSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTE 418
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA + + + PD++TY I++D L + GR++ L M + G P I+Y L+
Sbjct: 419 KAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 478
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + R+D F+EM D L Y +L++ + ++ +E+ ++ + ++
Sbjct: 479 EGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--- 535
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P I VY +L+D K G++D +FE+M
Sbjct: 536 PYIDVYNALMDGYCKEGRLDEIPNVFEDM 564
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 6/269 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCKA A LL+SL F+P+ Y ++ + +D + ++++ +L
Sbjct: 405 NTLIDGLCKASKTEKAYELLESLVSSG-FVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 463
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T S YT T + +E+V + ++ + KS + +
Sbjct: 464 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTK 523
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D I+G P + YN ++D + GR++++ N F M G VP+ +YN ++
Sbjct: 524 EAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 580
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++D + M +G PD+++Y +ID + +E+ ++ + M Q I
Sbjct: 581 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 640
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +L+ K + D A+ I + M
Sbjct: 641 PDAVTYNTLMAQFCKEERFDDAVGILKNM 669
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 7/270 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
NGY CK+ A +++ +R + YN ++ + +D + +D+
Sbjct: 514 NGY----CKSSRTKEAQKVVDGIRGTPYI--DVYNALMDGYCKEGRLDEIPNVFEDMACR 567
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ Y + F+E + ++ N II K+ + ++A
Sbjct: 568 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 627
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ D + PD +TYN ++ + R +D + +M +AGV PD ++YNTL++
Sbjct: 628 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 687
Query: 183 LRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + RL EM +G + TY +ID + G ++++L L + M +
Sbjct: 688 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 747
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ID L K G++D A ++ EM++
Sbjct: 748 NTVTYNIFIDRLCKEGRLDEASSLLSEMDT 777
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L KA A ++L + I P+A YN ++ + D + ILK+++ +
Sbjct: 615 IDGLFKASKPKEARQVLDQMIQAGI-PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV-NRIIFAFAKSRQIEKA 122
+ Y T+ + E+++ S N II K +++A
Sbjct: 674 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQA 733
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM-KEAGVVPDFISYNTLLN 181
LL+ DH+ G + + +TYNI +D L + GR L+E +S+ E + D +SY T++
Sbjct: 734 LLLMDHMTGHGVEANTVTYNIFIDRLCKEGR----LDEASSLLSEMDTLRDEVSYTTVII 789
Query: 182 NLRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K +LD REM G+ T+ LID+F +T ++E+L L M Q+
Sbjct: 790 GLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCS 849
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF---------------------------------- 266
PS+ Y +I L K+ KVD A +F
Sbjct: 850 PSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQV 909
Query: 267 -EEMNSS 272
EEM SS
Sbjct: 910 LEEMASS 916
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 34/196 (17%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
VV+R++ K Q ++ +G K T N L L G + + F M
Sbjct: 95 VVSRVLQRL-KDPQTAIVFFVWAGDRGFK--HSTFTRNCFLQTLLENGSSDRIPAMFERM 151
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+AG PD +Y+ ++ +L ++ ++D + G KP++ YT L +F +TG +
Sbjct: 152 LDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRL 211
Query: 225 EESLRLF-------------------------------NDMKQQQIRPSIYVYRSLIDNL 253
+++L +F +M ++++ P ++ Y LID L
Sbjct: 212 KDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGL 271
Query: 254 KKMGKVDLAMTIFEEM 269
K K D A + EM
Sbjct: 272 CKASKTDKASEMLHEM 287
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 42/212 (19%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQ---SLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
N +I++LCK G + A LL +LRD+ +Y V++ + +D + ++ +++
Sbjct: 753 NIFIDRLCKEGRLDEASSLLSEMDTLRDEV-----SYTTVIIGLCKAEQLDRASKLAREM 807
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + C T+ N +I AF K++++
Sbjct: 808 VA----VKGLCITSH------------------------------TFNLLIDAFTKTKRL 833
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++AL + + C P +ITYN+V+ L ++ +V+ F M G+V +SY L
Sbjct: 834 DEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 893
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
+ L R L EM S + D L +
Sbjct: 894 IYGLCGQGRGKEALQVLEEMASSDCEIDDLKW 925
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%)
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+V +L R+ + F + G + N L L + D F M ++
Sbjct: 95 VVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDA 154
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G PD TY +I S + I+++ + + K + +P + VY L K G++ A
Sbjct: 155 GYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA 214
Query: 263 MTIFEEMNS 271
+ IF + S
Sbjct: 215 LEIFRNIPS 223
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 132/270 (48%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L + G+ L + ++ LP+ Y+ ++ A + D + + ++
Sbjct: 198 NSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMK 257
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT + + L ++E+ + ++ +I K+ ++E
Sbjct: 258 ENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVE 317
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IF ++ CKPD++ N ++++LG+ GR+ D + F M+ P+ ++YNT++
Sbjct: 318 EAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVI 377
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R +++ +M E+G+ P TY+ LID F +T +E++L L +M ++
Sbjct: 378 KALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGF 437
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI+ L K + + A +F+E+
Sbjct: 438 APCPAAYCSLINALGKAKRYEAANELFQEL 467
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 134/275 (48%), Gaps = 10/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA----SAETNDIDLSFQIL 56
N I L KAG ++ A++L + + PN YN V+ A A ++ L ++ +
Sbjct: 339 NNLINLLGKAGRLADAIKLFEEMESLQC-TPNVVTYNTVIKALFESKARASEAFLWYEKM 397
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K+ + SS Y+ F T+ + L+ +EE+ + +I A K+
Sbjct: 398 KE---NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKA 454
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ E A +F ++ Y +++ LG+ GR+++ ++ F MK+ G PD +Y
Sbjct: 455 KRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAY 514
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ + ++ D R M E+G PDL ++ +++ F RTG + ++ +F MK
Sbjct: 515 NALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKN 574
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+I+P + Y +++ L + G + A + +EMNS
Sbjct: 575 SKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNS 609
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFA 162
++ I+ K++ + KAL IF IKG KCKP TYN ++ +L G +V+++ NE
Sbjct: 162 LSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMC 221
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ E +PD ++Y+ L+ K+ R D + F EM E+G+ P YT ++ + + G
Sbjct: 222 N--EGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++L L +MK++ ++Y Y LI + K GKV+ A +IF M
Sbjct: 280 RVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNM 326
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 135/307 (43%), Gaps = 43/307 (14%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G +A+ L +++ N P A Y +L + ++ + +++++ L+
Sbjct: 242 KLGRDDSAISLFDEMKE-NGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTV 300
Query: 69 DCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
YT + + IF+ + + P+ ++++N +I K+ ++ A+ +F+
Sbjct: 301 YTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPD-VVLINNLINLLGKAGRLADAIKLFE 359
Query: 128 HIKGLKCKPDLITYNIVLDIL-GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
++ L+C P+++TYN V+ L R ++ + MKE GVVP +Y+ L++ K
Sbjct: 360 EMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKT 419
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT------------------------- 221
R++ L+ EM E G P Y +LI++ G+
Sbjct: 420 NRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVY 479
Query: 222 ----------GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM-- 269
G + E++ LFN+MK+ P +Y Y +L+ + ++G D A ++ M
Sbjct: 480 AVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEE 539
Query: 270 NSSLSDL 276
N DL
Sbjct: 540 NGCTPDL 546
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK V A+ LL+ + +K P AY ++ A + + + ++ ++L
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL----- 467
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+C + AR + + +I K ++ +A+
Sbjct: 468 --RENCGYSSARVYAV----------------------------MIKHLGKCGRLSEAVD 497
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ +K L C PD+ YN ++ + RVG ++ + +M+E G PD S+N +LN
Sbjct: 498 LFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFA 557
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ + F M S IKPD+++Y ++ R G EE+ +L +M + +
Sbjct: 558 RTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLI 617
Query: 245 VYRSLIDNLKKMGKVD 260
Y S+ L+ +GK+D
Sbjct: 618 TYSSI---LEAVGKID 630
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I AF K + + A+ +FD +K P Y +L I ++GRV L
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MKE G +Y L+ + K +++ F M + G KPD++ LI+ G+ G
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
+ ++++LF +M+ Q P++ Y ++I L + + A +E+M +
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKEN 400
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D TY ++ L G + +M M + V + ++ L K + ++ L F
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSLIDNLKK 255
++ KP TY ++I + G+ E+ L+N+M + P Y +LI K
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242
Query: 256 MGKVDLAMTIFEEMNSS 272
+G+ D A+++F+EM +
Sbjct: 243 LGRDDSAISLFDEMKEN 259
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 7/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDL--LVS 62
I CKAG V A LL ++++ + + + L+ ID + + K + S
Sbjct: 118 INGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECS 177
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIE---EVVQIASPESIIVVNRIIFAFAKSRQI 119
++ + N D+ +L +E E P+ +I + +I A K++++
Sbjct: 178 PNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPD-VISYSTVIDALCKAQRV 236
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KA F ++ + C P+++TY+ ++D L +V R ++ L MKE G + I +N +
Sbjct: 237 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAM 296
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L K + +F + +SG KP+++TY + + G ++E+ R+ +M + ++
Sbjct: 297 LHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKV 356
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y S+ID K G++D A +F M
Sbjct: 357 TPDVITYSSIIDGFCKAGRMDKADDVFTRM 386
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 12/277 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPN--AYNCVLVASAETNDIDLSFQIL 56
N + LCKA + A+ L + + + P+ +Y+ V+ A + +D +++
Sbjct: 184 NTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF 243
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
K + + Y++ D +C +LL+ ++E +II N ++ A
Sbjct: 244 KRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEK---GFGINIIDFNAMLHAL 300
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K+ + EKA F+ + KP+++TYN+ + L + GRV++ M E+ V PD
Sbjct: 301 WKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDV 360
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
I+Y+++++ K R+D F M P +T+ L+ F E+ R+ D
Sbjct: 361 ITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHED 420
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
M P + Y L+D + V+ A+ I+ +M
Sbjct: 421 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMK 457
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKA V A + +R PN Y+ ++ + + ++L +
Sbjct: 227 IDALCKAQRVDKAYEYFKRMRAVGC-APNVVTYSSLIDGLCKVDRPSECLELLLHMKEKG 285
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ + A D+ + F E +++ +++ N + K+ ++++A
Sbjct: 286 FGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAY 345
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + K PD+ITY+ ++D + GR++ + F M +P +++ TLL+
Sbjct: 346 RILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGF 405
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ ++ +M +G P L TY L+D ++E +L +++ MK+++ +P
Sbjct: 406 SEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDC 465
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L + +VD A + M +
Sbjct: 466 NTYAPLIQCLCRARRVDEAKEFLDVMEA 493
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 116/264 (43%), Gaps = 3/264 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK S + LL +++K F N +N +L A + ++ + + Q + LL S
Sbjct: 262 IDGLCKVDRPSECLELLLHMKEKG-FGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 320
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y + + E+V+ +I + II F K+ +++KA
Sbjct: 321 KKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 380
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + +C P +T+ +L + + M AG +P +YN L++ +
Sbjct: 381 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 440
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ L + +M +PD TY LI R ++E+ + M+ + P+
Sbjct: 441 CGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNG 500
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFE 267
+ +L++ L K G+VD A ++ +
Sbjct: 501 AICHALVEVLCKQGEVDEACSVLD 524
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 107/240 (44%), Gaps = 15/240 (6%)
Query: 20 RLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTN----FA 75
RLL+S + N+ YN + + +D +++IL +++ S T Y++ F
Sbjct: 315 RLLKSGKKPNVV---TYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFC 371
Query: 76 RAFIM--TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK 133
+A M DD +F +V P + + ++ F++ ++ +A + + +
Sbjct: 372 KAGRMDKADD-----VFTRMMVHECIPHPVTFMT-LLHGFSEHKKSREAFRVHEDMVNAG 425
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
P L TYN+++D + V L + MK PD +Y L+ L + RR+D
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAK 485
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+ M + P+ AL++ + G ++E+ + +++ + +P ++ L++ L
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D TY++ + + + G+ ++ + M GV PD +Y +L +L + R++ + F
Sbjct: 566 DAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEF 625
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
+M G P L+TYT LI +E+ R+F M P R+L L+
Sbjct: 626 EKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDA 685
Query: 257 GKVDL 261
G DL
Sbjct: 686 GYQDL 690
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 137 DLITY--NIVLDILGRV-GRVNDMLNEFASMKEAGVVPDF----ISYNTLLNNLRKIRRL 189
DL Y + ++ GRV +V D + + AG P F + LLN K +R
Sbjct: 33 DLAGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRH 92
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ +E E P+ + YT +I+ F + G ++++ L ++MK++ ++ + ++ +L
Sbjct: 93 EEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTL 152
Query: 250 IDNLKKMGKVDLAMTIFEEMNSSLS 274
I L + G++D A+ F+ M S
Sbjct: 153 IQGLCRKGRIDEALEQFKSMGEECS 177
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 120/304 (39%), Gaps = 37/304 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKAG V A R+L + + + P+ Y+ ++ + +D + + ++
Sbjct: 329 NVAVHGLCKAGRVDEAYRILLEMVESKV-TPDVITYSSIIDGFCKAGRMDKADDVFTRMM 387
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V + F + E++V + N ++ + +E
Sbjct: 388 VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 447
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFISYNTL 179
AL I+ +K K +PD TY ++ L R RV D EF + EA VVP+ + L
Sbjct: 448 SALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRV-DEAKEFLDVMEADNVVPNGAICHAL 506
Query: 180 LNNLRKIRRLD-LCLI-----------------------YFREMGES--------GIKPD 207
+ L K +D C + Y R+ E+ G D
Sbjct: 507 VEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVAD 566
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
TY+ + + G +E++ + M + +RP Y +++ +L + +V+ A+ FE
Sbjct: 567 AATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFE 626
Query: 268 EMNS 271
+M S
Sbjct: 627 KMAS 630
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 7/167 (4%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS- 163
+ + ++ K ++++A + D++ + C+P T+ I+++ L + E AS
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKW-----EAASK 556
Query: 164 -MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++ G V D +Y+ + + K + D + +M G++PD TY A++ S
Sbjct: 557 LLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLD 616
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E ++ F M + P + Y LI D A IFE M
Sbjct: 617 RVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAM 663
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 76/214 (35%), Gaps = 37/214 (17%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+C+ +E LCK G V A +L + V + +F+IL + L
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDN----------------VVEVGCQPLGETFKILVEEL 545
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + R+ D + + E+ + P+ + V IE
Sbjct: 546 YLRKKWEA--ASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEV------------IE 591
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +L KG++ PD TY VL L + RV + EF M G P ++Y L+
Sbjct: 592 QMVL-----KGVR--PDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLI 644
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D F M +G P T L
Sbjct: 645 GEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 135/276 (48%), Gaps = 6/276 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+V+ A L + + + I P+ YN V+ A + +D + L+ +
Sbjct: 226 NTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYNSVVHALCKARAMDKAEAFLRQM- 283
Query: 61 VSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V+ R L ++ Y N + T + + +E+ + + ++ ++ ++ + K +I
Sbjct: 284 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 343
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +FD + PD+ +YNI+L+ G + DM + F M G+ PDF ++N L
Sbjct: 344 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 403
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ LD +I F EM + G+KPD++TY +I + R G +++++ FN M Q +
Sbjct: 404 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 463
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEE-MNSSLS 274
P Y Y LI G + A + E MN+ +
Sbjct: 464 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 48/252 (19%)
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFAK 115
R LS +T +A I+ D CT+ L F ++++ +II+ N ++ F +
Sbjct: 106 GPRVLSPTSHT-YA---ILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCE 161
Query: 116 SRQIEKALLIFDHIK--------------------------------------GLKCKPD 137
+++ ++AL I H G C P+
Sbjct: 162 AKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPN 221
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
++ YN V+D + G VN + F M + G+ PD ++YN++++ L K R +D + R
Sbjct: 222 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 281
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+M + P+ TY LI + TG +E++R+F +M++ I P + L+ +L K G
Sbjct: 282 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 341
Query: 258 KVDLAMTIFEEM 269
K+ A +F+ M
Sbjct: 342 KIKEARDVFDTM 353
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ G + A+ + +RD + P+ Y V+ A +D + + ++
Sbjct: 401 NVLIKAYANCGMLDKAMIIFNEMRDHGV-KPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + F + I E++ I+ + II K ++
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 519
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IFD + PD + YN+++D VG++ L F +M AG+ P+ + Y TL+
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N KI R+D L FREM + GIKP + Y+ +ID G + F++M + I
Sbjct: 580 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y ++ L K D A+ +F+E+ +
Sbjct: 640 MDICTYNIVLRGLFKNRCFDEAIFLFKELRA 670
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + + + L + +V +++ ++ + K +I++ L +F +
Sbjct: 540 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 599
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
KP I Y+I++D L GR +F M E+G+ D +YN +L L K R D
Sbjct: 600 QRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 659
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F+E+ +K +++T +ID +T +EE+ LF + + ++ PS+ Y +I
Sbjct: 660 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMI 719
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
NL K G V+ A +F M ++
Sbjct: 720 TNLIKEGLVEEAEDMFSSMQNA 741
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D + +E+VQ P ++ N ++ A K+R ++KA +
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 284
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ P+ TYN ++ G+ + + F M+ ++PD ++ + L+ +L K ++
Sbjct: 285 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 344
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M G PD+ +Y +++ + G + + LF+ M I P Y + LI
Sbjct: 345 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 404
Query: 251 DNLKKMGKVDLAMTIFEEM 269
G +D AM IF EM
Sbjct: 405 KAYANCGMLDKAMIIFNEM 423
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA + A L+ + +K + LPN YN ++ + T + ++ K++
Sbjct: 261 NSVVHALCKARAMDKAEAFLRQMVNKRV-LPNNWTYNNLIYGYSSTGQWKEAVRVFKEM- 318
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLI------FIEEVVQIASPESIIVVNRIIFAFA 114
++ D T + +M C I F ++ +P+ + N ++ +A
Sbjct: 319 -RRHSILPDVVT---LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD-VFSYNIMLNGYA 373
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ +FD + G PD T+N+++ G ++ + F M++ GV PD +
Sbjct: 374 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 433
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y T++ L +I ++D + F +M + G+ PD Y LI F G++ ++ L +++
Sbjct: 434 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 493
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ I + S+I+NL K+G+V A IF+
Sbjct: 494 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 526
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 15/237 (6%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQI 55
+ NGY CK G + + L + + + I P+ Y+ + L + T + F
Sbjct: 578 LVNGY----CKIGRIDEGLSLFREMLQRGI-KPSTILYSIIIDGLFEAGRTVPAKMKFHE 632
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFI-EEVVQIASPESIIVVNRIIFAFA 114
+ + S C N + + C IF+ +E+ + +II +N +I
Sbjct: 633 MTE----SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 688
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++R++E+A +F I + P ++TY+I++ L + G V + + F+SM+ AG P+
Sbjct: 689 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 748
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
N ++ L K + Y ++ E + LT L+D F G E +R
Sbjct: 749 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 122/281 (43%), Gaps = 12/281 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI---FLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
I LCK G V A Q++ D + P+A YN ++ ++ + ++ ++
Sbjct: 509 INNLCKLGRVMDA----QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 564
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + + L E++Q S I+ + II ++ +
Sbjct: 565 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTV 624
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + F + D+ TYNIVL L + ++ + F ++ V + I+ NT++
Sbjct: 625 PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 684
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + RR++ F + S + P ++TY+ +I + + G +EE+ +F+ M+
Sbjct: 685 DGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 744
Query: 241 PSIYVYRSLIDNLKKMGKVDLA---MTIFEEMNSSLSDLAG 278
P+ + ++ L K ++ A ++ +E N SL L
Sbjct: 745 PNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTA 785
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 133/284 (46%), Gaps = 8/284 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ L K +V A +++ + ++N ++ D D + + ++D+
Sbjct: 235 NVLIDALVKGDSVEHAHKVVLEFKGSIPLSSRSFNVLMHGWCRARDFDNARKAMEDMKEH 294
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YTNF A+ D ++ +EE+ + P + + ++ K+ Q+ KA
Sbjct: 295 GFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKA 354
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L +++ +K C D Y+ ++ ILG+ GR+ D + F M + GVV D ++YN++++
Sbjct: 355 LEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMIST 414
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
R + L +EM + KP++ TY L+ + ++ L + M + I P
Sbjct: 415 ACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNISPD 474
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM--------NSSLSDLAG 278
+ Y L++ L+K GKV+ A + EEM S+L LAG
Sbjct: 475 LATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPSTLKKLAG 518
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 48/181 (26%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI-- 186
+ G + P+L YN+++DILG+ R D ++E ++E + +++ T+ +R++
Sbjct: 154 LTGYRHSPEL--YNLMVDILGKC-RSFDSMSEL--VEEMARLEGYVTLETMTKVMRRLAR 208
Query: 187 -RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE--------------SLRLF 231
R+ + + F M + G+K D LID+ + ++E S R F
Sbjct: 209 ARKHEDAIEAFGRMEKFGVKKDTAALNVLIDALVKGDSVEHAHKVVLEFKGSIPLSSRSF 268
Query: 232 N--------------------DMKQQQIRPSIYVYRSLID---NLKKMGKVDLAMTIFEE 268
N DMK+ P ++ Y + I+ + + KVD + EE
Sbjct: 269 NVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVD---QVLEE 325
Query: 269 M 269
M
Sbjct: 326 M 326
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E CK A++LL +RDK P+ YN V+ + +D + + LK+L
Sbjct: 202 LEATCKRSGYKQAMKLLDEMRDKGC-TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 260
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII------------- 110
++ Y + + + E+ Q P +++ N +I
Sbjct: 261 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 320
Query: 111 ----------------------FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
AF K ++++KA+ D + C PD+++YN +L L
Sbjct: 321 EVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 380
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G V+ + +K+ G P ISYNT+++ L K + L EM G++PD+
Sbjct: 381 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 440
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY+ + R IE+++R F ++ IRP+ +Y ++I L K + A+ +F
Sbjct: 441 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 500
Query: 269 M 269
M
Sbjct: 501 M 501
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
C I+KL +G + A R+L + + AYN ++ +D + +
Sbjct: 101 CAALIKKLSASGRTAEARRVLAACGPDVM----AYNAMMAGYCGAGQVDAARR-----WC 151
Query: 62 SSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ R + D YT R L ++E+++ ++ ++ A K
Sbjct: 152 AERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGY 211
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A+ + D ++ C PD++TYN+V++ + + GRV+D + ++ G P+ +SYN +
Sbjct: 212 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 271
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L L R + EMG+ G P+++T+ LI R G +E +L + + +
Sbjct: 272 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 331
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y L+ K K+D AM + M S
Sbjct: 332 SPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 1/271 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
C+ I LC G + A+ +L + LR + + Y +L A+ + + + ++L ++
Sbjct: 163 CDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 222
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y + F++ + + + N ++ + + E
Sbjct: 223 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 282
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + + C P+++T+N+++ L R G V L + + G P+ +SYN LL
Sbjct: 283 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLL 342
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +++D + + M G PD+++Y L+ + R+G ++ ++ L + +K +
Sbjct: 343 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 402
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y ++ID L K GK A+ + EM S
Sbjct: 403 PVLISYNTVIDGLTKAGKTKEALELLNEMVS 433
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC A A L+ + K PN +N ++ ++ + ++L+ +
Sbjct: 272 LKGLCTAERWEDAEELMGEMGQKGCP-PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 330
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ +S Y AF + + F++ +V I+ N ++ A +S +++ A+
Sbjct: 331 CSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 390
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ +K C P LI+YN V+D L + G+ + L M G+ PD I+Y+T+ L
Sbjct: 391 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F ++ + GI+P+ + Y A+I + ++ LF M P+
Sbjct: 451 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 510
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI+ L G + A + +E+ S
Sbjct: 511 STYTILIEGLAYEGLIKEARDLLDELCS 538
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G + A +L ++ K P+ YN ++ ++ + ++ ++
Sbjct: 272 IDALCKEGRILEAQGVL-AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV--K 328
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R L D Y + T + ++ +E+ +I N +I S +I
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D + G PD++TYNI++D L + GR+ + L M + GV P+ ++YN +++
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD 448
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+++ F M +SG++PD+L Y LI+ + +T ++E++ LF +M+ + + P
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I Y SLID L +G++ + +EM S
Sbjct: 509 DIASYNSLIDGLCNLGRIPHVQELLDEMCDS 539
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N +E C NV A L + + + P+ YN ++ +T +D + + K+L
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGL-EPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + + + + ++E+ A P ++ N +I A K +I
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + KP+++TYN ++D VN + F M ++G+ PD ++YN L+
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K +D ++ F+EM + PD+ +Y +LID G I L ++M
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y L+D K D A+++F ++
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQI 571
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC +G +S +LL + + P+ YN ++ A + I + +L ++
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHG-SAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + ++ +V+ I+ N +I + K+ ++
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD 492
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+A+++F ++ PD+ +YN ++D L GR+ V ++L+E M ++G PD I+YN
Sbjct: 493 EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE---MCDSGQSPDVITYN 549
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL+ K + D + FR++ E GI PD T A++D+ + ++ + +
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y LI+ L K G AM + +M
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSKM 640
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-ETNDIDLSFQILKDLLVSSRTLSSD 69
+ G+ A+ L L+ K I A +L+ + +F +L +L S +
Sbjct: 67 RMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLV 126
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
+ F + + L F + ++ +I +K+ QI+ AL + +
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
+ +P+L+ Y+ ++D L + G V+D L + + E G++ D ++YN+L++ + R
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246
Query: 190 ----DLCLIYFRE-------------------------------MGESGIKPDLLTYTAL 214
L RE M + G KPD++TY AL
Sbjct: 247 QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNAL 306
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + N+ E+ LFN M ++ + P + Y LID K VD AM +F+E+
Sbjct: 307 MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G + A+ +L + K + PN YN ++ N+++++ I ++ S
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGV-KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + T+ + ++ +E+ I N +I +I
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + PD+ITYNI+LD + + ++ F + E G+ PDF + + +++NL
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNL 589
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +L + + + G P++ TYT LI++ + G+ E++ L + M+ P
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +I L + + D A + EEM
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEM 675
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N II F + I KAL ++ D TY +++ L + G++ L+
Sbjct: 124 NLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLL 183
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+++ V P+ + Y+ L++ L K + L ++GE GI D +TY +LID
Sbjct: 184 QEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSV 243
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G +E +L M ++ + P Y + LID L K G++ A + M+
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 72/156 (46%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
R ++ A+ F+ + + P ++ +L + R+G ++ F ++ G+ P ++
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L+N + +SG +P+L+T+ +I+ F G I ++L ++
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Q + Y +LI+ L K G++ A+ + +EM S
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKS 189
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I +LC G S A+++ + YN ++ DI+ + + + +L
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y ++ + ++ + + N ++ F+K ++E
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A F + P+ ++Y ++D + G+V+ L+ M+E G P+ SYN ++N
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVIN 556
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K R +M E G+ P+++TYT LID R G + + ++F+DM++++ P
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y SLI L + GK D A + +EM
Sbjct: 617 NLYTYSSLIYGLCQEGKADEAEILLKEM 644
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 122/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I L + G + A+ L + + + +PN YN ++ + +I +
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGL-VPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + + D + ++ E+++++ +++ N +I + + A
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D +K C+PD TYN ++ + G++ F M E G+ P+ +SY L++
Sbjct: 464 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH 523
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D+ L + M E G P++ +Y A+I+ + E+ ++ + M +Q + P++
Sbjct: 524 SKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNV 583
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LID L + G+ A IF +M
Sbjct: 584 ITYTTLIDGLCRNGRTQFAFKIFHDM 609
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC G++ A+ L + + LP YN ++ +++ + ++L +
Sbjct: 412 NEIIKGLCLGGDIEKAMVLFEKMLKMGP-LPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y F + +E+V+ + + +I +K +++
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + ++ + C P++ +YN V++ L + R ++ M E G++P+ I+Y TL+
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L + R F +M + P+L TY++LI + G +E+ L +M+++ +
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 650
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + SLID +G++D A + M
Sbjct: 651 PDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ + ++ Q + +I ++R ++ A +FD + C P+ +TY+ +++ L
Sbjct: 219 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 278
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
GRV++ L+ M E G+ P +Y + L I + + M + G +P++
Sbjct: 279 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TYTALI R G +E ++ L++ M ++ + P+ Y +LI+ L G+ A+ IF
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398
Query: 269 MNSSLS 274
M S
Sbjct: 399 MEGHGS 404
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 126/304 (41%), Gaps = 38/304 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I L K G V A +L + ++ P+ Y +++ ++DL+F + ++
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQYDLS-PDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S Y+ + L +EE+++ ++ I A E
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + +K C+P++ TY ++ L R+G++ + + M + G+VP+ ++YN L+
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380
Query: 181 NNLRKIRRLD---------------------------LCL--------IYFREMGESGIK 205
N L R LCL + F +M + G
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P ++TY LI+ + GN+ + RL + MK+ P + Y L+ K GK++ A
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500
Query: 266 FEEM 269
F+EM
Sbjct: 501 FQEM 504
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 7/255 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY+ K GNV+ A RLL +++ N P+ YN ++ ++ ++ + ++++
Sbjct: 451 NGYLTK----GNVNNAARLLDLMKE-NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT L ++ + ++ ++ N +I +K +
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I D + P++ITY ++D L R GR F M++ +P+ +Y++L+
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + + D I +EM G+ PD +T+T+LID F G I+ + L M +
Sbjct: 626 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCK 685
Query: 241 PSIYVYRSLIDNLKK 255
P+ Y L+ L+K
Sbjct: 686 PNYRTYSVLLKGLQK 700
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+ E+ + S+ N ++ AK +E A ++ + +P L+T+N +++IL
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+V + + + + + PD +Y +L+ + R LDL F M + G P+ +
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY------------------------- 244
TY+ LI+ G ++E+L + +M ++ I P++Y
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329
Query: 245 ----------VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI L ++GK+++A+ ++ +M
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A +I + + I G+ L + N +L L + V N + M +G
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P +++NTL+N L K ++ + ++ + + PD+ TYT+LI R N++ +
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F+ M ++ P+ Y +LI+ L G+VD A+ + EEM
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L G L + ++ P+ Y+ ++ A + D + ++L ++
Sbjct: 194 NSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMK 253
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT F ++ L EE+ + +I K+ + +
Sbjct: 254 DNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFD 313
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A F ++ C+PD + N +++ LG+ GR++D + F M +P ++YNT++
Sbjct: 314 EAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTII 373
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R+ +F M SGI P TY+ LID F +T E+++ L +M ++
Sbjct: 374 KALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGF 433
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y SLID L K + D+A +F+E+ +
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDIAHELFQELKEN 466
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%), Gaps = 10/274 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAET----NDIDLSFQIL 56
N I L KAG + AV+L + + +P+ YN ++ A E+ ++I F+ +
Sbjct: 335 NNMINFLGKAGRLDDAVKLFEEMGTLQC-IPSVVTYNTIIKALFESKSRISEISSWFERM 393
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K +S + Y+ F T+ + ++ +EE+ + P +I A K+
Sbjct: 394 KGSGISPSPFT---YSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 450
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ + A +F +K Y +++ LG+ GR++D +N F M + G P+ +Y
Sbjct: 451 KRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAY 510
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ L + LD L R M E G PD+ +Y +++ +TG ++ + ++MKQ
Sbjct: 511 NALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 570
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I+P Y +++ + G + A + +EMN
Sbjct: 571 SAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMN 604
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 10/208 (4%)
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV---VNRIIFAFAKSRQIEKALL 124
+ Y R + + ++ I+E+V+ +P ++ ++ II ++ I KA+
Sbjct: 119 TSTYMALIRCLEVVEQYGEMWKMIQEMVR--NPVCVVTPMELSDIIRMLGNAKMISKAVA 176
Query: 125 IFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
IF IK KC+P YN ++ +L G+ +V+++ NE ++ E PD ++Y+ L++
Sbjct: 177 IFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSN--EGHCFPDTVTYSALIS 234
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ R D + EM ++G++P YT LI F + N+ +L LF +M+ Q RP
Sbjct: 235 AFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRP 294
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y LI L K G+ D A F EM
Sbjct: 295 DVFTYTELIRGLGKAGRFDEAYNFFHEM 322
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK A+ LL+ + +K P AY ++ A + D++ ++ ++L
Sbjct: 409 IDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQEL----- 463
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+C ++ AR + + +I K+ +++ A+
Sbjct: 464 --KENCGSSSARVYAV----------------------------MIKHLGKAGRLDDAVN 493
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD + L C P++ YN ++ L R G +++ L M+E G +PD SYN +LN L
Sbjct: 494 LFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLA 553
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + M +S IKPD ++Y ++ + G EE+ +L +M +
Sbjct: 554 KTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLI 613
Query: 245 VYRSLIDNLKKMGKVD 260
Y S+ L+ +GKVD
Sbjct: 614 TYSSI---LEAIGKVD 626
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K+ + EKA+++ + + P Y ++D LG+ R + F +KE
Sbjct: 408 LIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENC 467
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
Y ++ +L K RLD + F EM + G P++ Y AL+ R G ++E+L
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEAL 527
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M++ P I Y +++ L K G AM + M S
Sbjct: 528 TTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 571
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 30/304 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA---------SAETNDIDL 51
N ++ LCK+ V A+ L + ++ PN ++N +++ + + +D
Sbjct: 432 NTVMDGLCKSSRVEEALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDE 490
Query: 52 SFQILK---------DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES 102
+F++LK D++ S +S C + AR DD LL E++V+ +
Sbjct: 491 AFRLLKRMTDDGHVPDVVTYSTLISGLC--SIAR----VDDARHLL---EDMVKRQCKPT 541
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I K+ +I++A + D + PD++TYN ++ R G+ +
Sbjct: 542 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 601
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G+ P+ ++Y L++ L K RL F +M SG P+L TYTALI F G
Sbjct: 602 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 661
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
++ L+LF +M I P VY +L L K G+ A+ I E SL A +
Sbjct: 662 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV 721
Query: 283 KRKA 286
R A
Sbjct: 722 YRFA 725
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKD-----LLVS 62
LCKA V A+ L +++ +K I L + + VLV ++ ID + Q+ ++ LV+
Sbjct: 155 LCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVT 214
Query: 63 SRTL----SSDCYTNFARAFI--MTDD---------CTQLLIF-----IEEVVQIASPES 102
L S + AR + M D+ CT L +EE V++
Sbjct: 215 LNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRE 274
Query: 103 IIVV-------------NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ N +I ++ +I++A+ +F+ + PD +Y I++D L
Sbjct: 275 LPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLA 334
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G++ND N F + +GV P ++Y +L++ L D F +M G P +
Sbjct: 335 KAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPV 394
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +ID+ + G +EE+ L M + P + Y +++D L K +V+ A+ +F EM
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454
Query: 270 N 270
Sbjct: 455 E 455
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 32/280 (11%)
Query: 7 EKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
+LC G++ A +LL+ + N +AYN V+VA + +D D L +RT+
Sbjct: 122 HELCLRGSMERAFQLLEIMPVAN---SSAYNIVVVALCKAARVD-------DALELARTM 171
Query: 67 SSDCYTNFARAFIMTDDCTQLLIF------IEEVVQI----ASPESIIVVNRIIFAFAKS 116
S R + +L+ I+E +Q+ ++ +N ++ F
Sbjct: 172 SEK------RIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSR 225
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK------EAGVV 170
Q++KA + + +C PD ++Y VLD L + GRV + + F + +
Sbjct: 226 GQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSP 285
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P YN ++ L + R+D + F +M E + PD +Y LID + G + ++ L
Sbjct: 286 PSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNL 345
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
F + + PS Y SLI L D A +F +MN
Sbjct: 346 FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 385
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 38/270 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LCKAG + A +L ++ V+S ++ D+ + + LV
Sbjct: 546 NTLIHGLCKAGRIKEAREVLDAM---------------VSSGQSPDV-----VTYNTLVH 585
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ T AR + ++V +++ ++ K+ ++ +A
Sbjct: 586 GHCRAGQ--TERARELL------------SDMVARGLAPNVVTYTALVSGLCKANRLPEA 631
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F +K C P+L TY ++ G+V+ L F M AG+ PD + Y TL
Sbjct: 632 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAE 691
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLL---TYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L K R L RE G ++ + Y +D G +E +L DM +
Sbjct: 692 LCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQ 750
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ SL+ L K G+ A + EE+
Sbjct: 751 LPAPERCASLVAGLCKSGQGGEARAVLEEI 780
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFISYNTLLNNLRKIRRLDLCLI 194
P + + V+ VGR + + F+ M+E PD YN L+++L K + +
Sbjct: 8 PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEAVKK 65
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+ M + G PD T+T ++ + G ++E+ + ++M+ + I P L L
Sbjct: 66 MVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELC 125
Query: 255 KMGKVDLAMTIFEEM---NSS 272
G ++ A + E M NSS
Sbjct: 126 LRGSMERAFQLLEIMPVANSS 146
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 119/239 (49%), Gaps = 4/239 (1%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+A YN ++ A + I+ D+L ++ S Y N A + + + L
Sbjct: 183 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 242
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++ ++ N ++ AF Q KAL F+ IKG +PD T+NI++ L +
Sbjct: 243 CKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVK 302
Query: 151 VGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ + + ++ F SMKE + PD +++ ++++ ++ C F M G+KP++
Sbjct: 303 LKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNI 362
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++Y AL+ ++ G E+L++FN++KQ RP + Y SL++ + K A IF+
Sbjct: 363 VSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFK 421
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 127/273 (46%), Gaps = 10/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA--SAETNDIDLS-FQILK 57
N I +GN A+ + + + D + P+ +N +L A S LS F+++K
Sbjct: 224 NNLINACGSSGNWKEALNVCKKMTDNGVG-PDLVTHNIMLTAFKSGTQYSKALSYFELIK 282
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ T + + + D + ++E P+ ++ +I ++
Sbjct: 283 GTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPD-VVTFTSMIHLYSVCG 341
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
IE F+ + KP++++YN +L G N+ L F +K+ G PD +SY
Sbjct: 342 HIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYT 401
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+LLN + R+ F+ + + +KP++++Y ALID++G G +E+++ + +M+Q
Sbjct: 402 SLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQD 461
Query: 238 QIRPSIYVYRSLIDNLKKMG---KVDLAMTIFE 267
+I P++ +L+ + G K+D ++ E
Sbjct: 462 KIHPNVVSICTLLAACGRCGQKVKIDTVLSAAE 494
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I A+ + ++A +F ++ +CKPD TYN +++ GR G+ +N M
Sbjct: 152 IYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 211
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
A + P +YN L+N L ++M ++G+ PDL+T+ ++ +F
Sbjct: 212 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQY 271
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
++L F +K IRP + +I L K+ + D A+ IF M S+
Sbjct: 272 SKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSE 322
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A ++ Q A+ I D + P TYN +++ G G + LN M +
Sbjct: 189 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 248
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV PD +++N +L + + L YF + + I+PD T+ +I + ++
Sbjct: 249 NGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDK 308
Query: 227 SLRLFNDMKQQ--QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +FN MK++ + P + + S+I G ++ F M
Sbjct: 309 AVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMM 353
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I+ N ++ A+A +AL +F+ IK +PD+++Y +L+ GR + F
Sbjct: 361 NIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIF 420
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT----------- 210
+K + P+ +SYN L++ L+ + REM + I P++++
Sbjct: 421 KMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRC 480
Query: 211 ------------------------YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
Y + I S+ G ++++ L+N M++++I+ Y
Sbjct: 481 GQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTY 540
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
LI KM K A++ EEM
Sbjct: 541 TVLISGCCKMSKFGEALSFMEEM 563
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 90/225 (40%), Gaps = 39/225 (17%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ L E+ Q ++ ++ A+ +SR+ +KA IF IK KP++++YN ++
Sbjct: 380 EALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALI 439
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFIS------------------------------ 175
D G G + D + M++ + P+ +S
Sbjct: 440 DAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIK 499
Query: 176 -----YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
YN+ + + + D + + M + IK D +TYT LI + E+L
Sbjct: 500 LNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSF 559
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKK----MGKVDLAMTIFEEMNS 271
+M ++ S VY S+I K +G++ A + F M S
Sbjct: 560 MEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKS 604
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 75/188 (39%), Gaps = 31/188 (16%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ L F+EE++ + P S V + II A++K
Sbjct: 555 EALSFMEEMMHLKLPMSKEVYSSIICAYSKQASA-------------------------- 588
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+G++ + + F MK G PD ++Y +L+ + + F EM E+ +K
Sbjct: 589 -----LGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVK 643
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D + AL+ +F + G L L M+++ I S ++ ++ + A+ +
Sbjct: 644 LDTIACAALMRAFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDM 703
Query: 266 FEEMNSSL 273
+ M SL
Sbjct: 704 IKYMEPSL 711
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 129/283 (45%), Gaps = 7/283 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I C+ N+ A LLQ++ + YN ++ + + + Q+L+ +
Sbjct: 156 NTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA 215
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S Y++F + +E++ +++ N I+ KS +I+
Sbjct: 216 SGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDT 275
Query: 122 ALLIFDHIKGL-KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + + C +++ Y+ V+D L ++GR + + +M AG PD ++Y++L+
Sbjct: 276 ALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLV 335
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-----K 235
N L K +++ + REM G KP+ +TY +L+ G + E+ R+ +M
Sbjct: 336 NGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGG 395
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
PS+ Y +LI L K G++D A+ F+ M S D G
Sbjct: 396 GDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 127/274 (46%), Gaps = 5/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + K G RLL+++ + I PN +YN +L + + ++++D++
Sbjct: 14 NALVNGFSKQGRPGDCERLLETMAARGI-QPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D Y+ + + ++EV+ ++ +++ + KS +
Sbjct: 73 SRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSAR 132
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +AL + + + C P LIT+N ++ R + + +M +GV D ++YNT
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNT 192
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ L K RL M SG PD++ Y++ + ++G + + ++ M+
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSD 252
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y +++D L K GK+D A+ + E+M SS
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
S ++ + ++ + K+ ++E++ + + +PD + Y V+ L + R+ + L
Sbjct: 78 STPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEAL 137
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M AG P I++NTL++ + + L++ + M SG+K D++TY L+D
Sbjct: 138 ELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGL 197
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ G ++E+ +L MK P + Y S + L K GKV A + E+M S D
Sbjct: 198 CKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHD 254
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 9/226 (3%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
++ LCK+G V A ++L+ +RD + PN YN +L ++ ID + ++++ + S
Sbjct: 228 FVYGLCKSGKVLNAHQVLEQMRDSD-HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286
Query: 63 SRT-LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L+ Y+ + +E + + ++ + ++ K+ +IE+
Sbjct: 287 DGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEE 346
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEA--GVVPDFISY 176
A+ + CKP+ +TY ++ L GR+ M+ E +S P +Y
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTY 406
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
N L+ L K R+D L +F+ M G PD ++Y+ +++ R+G
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C P+ +T+N +++ + GR D +M G+ P+ +SYN LL L K+ R
Sbjct: 6 CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65
Query: 194 IYFREMGESGIK--PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
R+M G + PDL+TY+ L+ + + G +EES L ++ + +RP +Y ++
Sbjct: 66 ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125
Query: 252 NLKK 255
+L K
Sbjct: 126 SLCK 129
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G P+ +++N L+N K R C M GI+P++++Y L++ +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 224 IEESLRLFNDMKQQQIR--PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+ L DM + R P + Y +L+ K GKV+ + + +E+
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEV 108
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/156 (17%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G A +++++ P+ Y+ ++ + I+ + + ++++ +
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCR-PDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIA-----SPESIIVVNRIIFAFAKSRQ 118
++ Y + + +EE+ P S+ N +I K+ +
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGR 418
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
I+ AL F ++ C PD ++Y+ +++ L R GR
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G V AV++ + K P A YN ++ + +D + ++
Sbjct: 115 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 174
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y A M T+ +EE+ + N +I K ++KAL
Sbjct: 175 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 234
Query: 124 LIFDHI--KGLKC---------------------------------KPDLITYNIVLDIL 148
IF+++ +G++ +PDL+ YN +++
Sbjct: 235 EIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 294
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G ++ M++ + PD ++YNTL+ L + R+D EM + GI+PDL
Sbjct: 295 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDL 354
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY LI + G+++++LR+ N+M + P++ Y +LI L K G+ D A + +E
Sbjct: 355 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 414
Query: 269 M 269
M
Sbjct: 415 M 415
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 36/269 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G V AA+ +++ +R++ PN Y V+ + +D + ++ ++L
Sbjct: 76 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 135
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
PE+++ N +I + +++
Sbjct: 136 TKGEV---------------------------------KPEAVMY-NALIGGYCDQGKLD 161
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
ALL D + + TYN+++ L GR + M G+ PD +YN L+
Sbjct: 162 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 221
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K + L F M G++ ++TYT+LI + + G ++E+ +LF++ ++ IR
Sbjct: 222 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR 281
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + +Y +LI++ G +D A I EM
Sbjct: 282 PDLVLYNALINSHSTSGNIDRAFEIMGEM 310
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 3/243 (1%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + A L++ + K + P+ YN ++ + ++ + +I +++ +
Sbjct: 193 GRGTEAYELVEEMGGKGL-APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 251
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT+ A + +E V+ +++ N +I + + S I++A I ++
Sbjct: 252 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 311
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ PD +TYN ++ L +GRV++ M + G+ PD ++YNTL++ +
Sbjct: 312 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 371
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L EM G P LLTY ALI + G +++ + +M + I P Y SLI
Sbjct: 372 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431
Query: 251 DNL 253
+ L
Sbjct: 432 EGL 434
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 38/215 (17%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK-CKPDLITYNIVLDILG 149
+E + Q+ P ++ N +I F +++ AL I ++ P+ TY V+
Sbjct: 61 LELLRQMPRPNAV-TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 119
Query: 150 RVGRVNDMLNEFASMKEAG-VVPDFISYNTLLNNLRKIRRLDLCLIY------------- 195
+VGRV++ + F M G V P+ + YN L+ +LD L+Y
Sbjct: 120 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 179
Query: 196 ----------------------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
EMG G+ PD+ TY LI+ + GN++++L +F +
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 239
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
M ++ +R ++ Y SLI L K G+V +F+E
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDE 274
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 29/228 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVA---SAETNDIDLSFQ------- 54
I CK GNV A+ + +++ + + Y ++ A + + D F
Sbjct: 221 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280
Query: 55 ----ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
+L + L++S + S N RAF + + + I ++V N ++
Sbjct: 281 RPDLVLYNALINSHSTSG----NIDRAFEIMGEMEKKRIAPDDVT----------YNTLM 326
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++++A + D + +PDL+TYN ++ G V D L M G
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 386
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
P ++YN L+ L K + D +EM E+GI PD TY +LI+
Sbjct: 387 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 129/268 (48%), Gaps = 5/268 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN I+KLC G V+ A R++++L + YN ++ +ID + +++ +
Sbjct: 99 CNILIKKLCADGRVADAERVVEALGPSATII--TYNTMVNGYCRAGNIDAARRMIDSVPF 156
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ T + Y RA + L ++++ S++ + ++ A K ++
Sbjct: 157 APDTFT---YNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQ 213
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+++ D ++ C+PD++TYN++++ + G V + L S+ G PD ++Y +L
Sbjct: 214 AVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLK 273
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L R + +M + PD +T+ A+I S + G + + ++ M + P
Sbjct: 274 SLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTP 333
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I Y S++D L K +VD A+ + +E+
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKEL 361
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 92 EEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
E VV+ P +II N ++ + ++ I+ A + D + PD TYN ++ L
Sbjct: 116 ERVVEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPF---APDTFTYNPLIRALCV 172
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G V D L F M G P ++Y+ LL+ K ++ EM G +PD++T
Sbjct: 173 RGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVT 232
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y LI++ G++ E+L++ N + +P Y ++ +L + + A + +M
Sbjct: 233 YNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMF 292
Query: 271 SS 272
S+
Sbjct: 293 SN 294
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 127/283 (44%), Gaps = 20/283 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I +C G+V A+++L SL P+A Y VL + + + + ++L
Sbjct: 234 NVLINAMCSQGDVGEALKVLNSLPSYGC-KPDAVTYTPVLKSLCSSERWEEADKLL---- 288
Query: 61 VSSRTLSSDCYTN-FARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFA 114
++ S+DC + ++T C + + + ++ + II + I+
Sbjct: 289 --TKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLC 346
Query: 115 KSRQIEKALLIFDHIKG----LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K R++++A+ + + C PD +T+N ++ L + G + + M E G +
Sbjct: 347 KERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCI 406
Query: 171 PDFISYNTLLNN-LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
PD +YN +++ L K + + L M +G+ PD TY +L R +E ++
Sbjct: 407 PDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIG 466
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+F ++ + P +Y +++ L K + DLA+ F M S+
Sbjct: 467 MFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSN 509
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC+ G V A ++L + + P+ Y+ ++ + +D + ++LK+LL
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGC-TPDIITYSSIMDGLCKERRVDEAIKLLKELL 362
Query: 61 VSSRTLSSDCYTN-FARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAF- 113
+ +S +C + I+T C + L ++E+ + I N I+ F
Sbjct: 363 --AEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFL 420
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
KS + E+AL + + + PD TY + L R + + F ++ G+ PD
Sbjct: 421 CKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDK 480
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+ YN +L L K R DL + +F M +G PD TY L++ G +EE+ L +
Sbjct: 481 MLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGN 540
Query: 234 M 234
+
Sbjct: 541 L 541
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
NR + + +++ AL + I G P +I NI++ L GRV D ++
Sbjct: 64 ANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALG 123
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES-GIKPDLLTYTALIDSFGRTGNI 224
+ + I+YNT++N + +D R M +S PD TY LI + G +
Sbjct: 124 PSATI---ITYNTMVNGYCRAGNIDA----ARRMIDSVPFAPDTFTYNPLIRALCVRGCV 176
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++L +F+DM + PS+ Y L+D K A+ + +EM S
Sbjct: 177 LDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRS 223
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 135/275 (49%), Gaps = 6/275 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+V+ A L + + + I P+ YN V+ A + +D + L+ +
Sbjct: 236 NTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYNSVVHALCKARAMDKAEAFLRQM- 293
Query: 61 VSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V+ R L ++ Y N + T + + +E+ + + ++ ++ ++ + K +I
Sbjct: 294 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 353
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +FD + PD+ +YNI+L+ G + DM + F M G+ PDF ++N L
Sbjct: 354 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 413
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ LD +I F EM + G+KPD++TY +I + R G +++++ FN M Q +
Sbjct: 414 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 473
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEE-MNSSL 273
P Y Y LI G + A + E MN+ +
Sbjct: 474 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 508
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C P+++ YN V+D + G VN + F M + G+ PD ++YN++++ L K R +D
Sbjct: 225 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 284
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ R+M + P+ TY LI + TG +E++R+F +M++ I P + L+
Sbjct: 285 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 344
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+L K GK+ A +F+ M
Sbjct: 345 GSLCKYGKIKEARDVFDTM 363
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ G + A+ + +RD + P+ Y V+ A +D + + ++
Sbjct: 411 NVLIKAYANCGMLDKAMIIFNEMRDHGV-KPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + F + I E++ I+ + II K ++
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IFD + PD + Y++++D VG++ L F +M AG+ P+ + Y TL+
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N KI R+D L FREM + GIKP + Y+ +ID + G + F++M + I
Sbjct: 590 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y ++ L K D A+ +F+E+ +
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELRA 680
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ + + + L + +V +++V ++ + K +I++ L +F +
Sbjct: 550 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 609
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
KP I Y+I++D L + GR +F M E+G+ D +YN +L L K R D
Sbjct: 610 QRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 669
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F+E+ +K +++T +ID +T +EE+ LF + + ++ P++ Y +I
Sbjct: 670 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMI 729
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
NL K G V+ A +F M ++
Sbjct: 730 TNLIKEGLVEEAEDMFSSMQNA 751
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D + +E+VQ P ++ N ++ A K+R ++KA +
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 294
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ P+ TYN ++ G+ + + F M+ ++PD ++ + L+ +L K ++
Sbjct: 295 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 354
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M G PD+ +Y +++ + G + + LF+ M I P Y + LI
Sbjct: 355 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 414
Query: 251 DNLKKMGKVDLAMTIFEEM 269
G +D AM IF EM
Sbjct: 415 KAYANCGMLDKAMIIFNEM 433
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA + A L+ + +K + LPN YN ++ + T + ++ K++
Sbjct: 271 NSVVHALCKARAMDKAEAFLRQMVNKRV-LPNNWTYNNLIYGYSSTGQWKEAVRVFKEM- 328
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLI------FIEEVVQIASPESIIVVNRIIFAFA 114
++ D T + +M C I F ++ +P+ + N ++ +A
Sbjct: 329 -RRHSILPDVVT---LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD-VFSYNIMLNGYA 383
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ +FD + G PD T+N+++ G ++ + F M++ GV PD +
Sbjct: 384 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 443
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y T++ L +I ++D + F +M + G+ PD Y LI F G++ ++ L +++
Sbjct: 444 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 503
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ I + S+I+NL K+G+V A IF+
Sbjct: 504 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 536
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQI 55
+ NGY CK G + + L + + + I P+ Y+ + L + T + F
Sbjct: 588 LVNGY----CKIGRIDEGLSLFREMLQRGI-KPSTILYSIIIDGLFQAGRTVPAKMKFHE 642
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFI-EEVVQIASPESIIVVNRIIFAFA 114
+ + S C N + + C IF+ +E+ + +II +N +I
Sbjct: 643 MTE----SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 698
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++R++E+A +F I + P+++TY+I++ L + G V + + F+SM+ AG P+
Sbjct: 699 QTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 758
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
N ++ L K + Y ++ E + LT L+D F G E +R
Sbjct: 759 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L E++Q S I+ + II ++ + A + F + D+ TYNIVL
Sbjct: 602 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 661
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + ++ + F ++ V + I+ NT+++ + + RR++ F + S + P+
Sbjct: 662 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA---MT 264
++TY+ +I + + G +EE+ +F+ M+ P+ + ++ L K ++ A ++
Sbjct: 722 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 781
Query: 265 IFEEMNSSLSDLAG 278
+E N SL L
Sbjct: 782 KIDERNFSLEHLTA 795
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E CK A++LL +RDK P+ YN V+ + +D + + LK+L
Sbjct: 200 LEATCKRSGYKQAMKLLDEMRDKGC-TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 258
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII------------- 110
++ Y + + + E+ Q P +++ N +I
Sbjct: 259 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 318
Query: 111 ----------------------FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
AF K ++++KA+ D + C PD+++YN +L L
Sbjct: 319 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 378
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G V+ + +K+ G P ISYNT+++ L K + L EM G++PD+
Sbjct: 379 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 438
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY+ + R IE+++R F ++ IRP+ +Y ++I L K + A+ +F
Sbjct: 439 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 498
Query: 269 M 269
M
Sbjct: 499 M 499
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 122/270 (45%), Gaps = 7/270 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
C I+KL +G + A R+L + + AYN ++ +D + +++ ++ V
Sbjct: 99 CAALIKKLSASGRTAEARRVLAACGPDVM----AYNAMVAGYCGAGQLDAARRLVAEMPV 154
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y R L ++E+++ ++ ++ A K ++
Sbjct: 155 EPDAYT---YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQ 211
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + D ++ C PD++TYN+V++ + + GRV+D + ++ G P+ +SYN +L
Sbjct: 212 AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLK 271
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R + EMG+ G P+++T+ LI R G +E +L + + + P
Sbjct: 272 GLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 331
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y L+ K K+D AM + M S
Sbjct: 332 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC A A L+ + K PN +N ++ ++ + ++L+ +
Sbjct: 270 LKGLCTAERWEDAEELMGEMGQKGCP-PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T +S Y AF + + F++ +V I+ N ++ A +S +++ A+
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 388
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ +K C P LI+YN V+D L + G+ + L M G+ PD I+Y+T+ L
Sbjct: 389 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 448
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F ++ + GI+P+ + Y A+I + ++ LF M P+
Sbjct: 449 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 508
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI+ L G + A + +E+ S
Sbjct: 509 STYTILIEGLAYEGLIKEARDLLDELCS 536
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC++G V AV LL L+DK + +YN V+ + + ++L +++
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV- 430
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S+ L D Y+ A D + +V + + ++ N II K R+
Sbjct: 431 -SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 489
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFAS 163
A+ +F ++ G C P+ TY I+++ L G + D+L+E S
Sbjct: 490 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 536
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 36/200 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG----RVNDMLNE---- 160
+I AFA S + +A+ +F ++ CKP LITYN++L++ G++G ++ ++ +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 161 ----------------------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
F MK AG D ++YN LL+ K R
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ EM +G P ++TY +LI ++ R G ++E++ L N M ++ +P ++ Y +L+
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
++ GKV+ AM+IFEEM ++
Sbjct: 394 FERAGKVESAMSIFEEMRNA 413
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 2/247 (0%)
Query: 29 NIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQ 86
N F P+ YN ++ A A +D + ++ + YT F
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
+ EE+ +I N I + + + + IFD I PD++T+N +L
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G+ G +++ F MK AG VP+ ++NTL++ + + + +R M ++G+ P
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
DL TY ++ + R G E+S ++ +M+ + +P+ Y SL+ ++ L ++
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 267 EEMNSSL 273
EE+ S +
Sbjct: 583 EEVYSGV 589
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 2/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L K G VS+A + L++ L +Y ++ A A + + + K +
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 65 TLSSDCYTNFARAF-IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F M ++ +E++ N +I + ++A
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K D +TYN +LD+ G+ R + + M G P ++YN+L++
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ LD + +M E G KPD+ TYT L+ F R G +E ++ +F +M+ +P+I
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ + I GK M IF+E+N
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 125/262 (47%), Gaps = 2/262 (0%)
Query: 10 CKAGNVSA-AVRLLQSLRDKNI-FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
CK G++ A ++ + ++ + YN +L +++ + ++L +++++ + S
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + A+ + + ++ + + + ++ F ++ ++E A+ IF+
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
++ CKP++ T+N + + G G+ +M+ F + G+ PD +++NTLL +
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
F+EM +G P+ T+ LI ++ R G+ E+++ ++ M + P + Y
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+++ L + G + + + EM
Sbjct: 529 TVLAALARGGMWEQSEKVLAEM 550
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVN 155
SP+ I +N ++ + + + + KA + D++K P + TYN ++ + R G+
Sbjct: 626 SPD-ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
++L E + G+ PD ISYNT++ R R D I F EM SGI PD++TY
Sbjct: 685 EILREILA---KGIKPDIISYNTVIYAYCRNTRMRDASRI-FSEMRNSGIVPDVITYNTF 740
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I S+ EE++ + M + RP+ Y S++D K+ + D A E++
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
I++ +LG+ GRV+ N F ++E G D SY +L++ R + F++M E
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESL-RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G KP L+TY +++ FG+ G + L MK I P Y Y +LI K+
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 262 AMTIFEEMNSS 272
A +FEEM ++
Sbjct: 298 AAQVFEEMKAA 308
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 67/134 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N +++ ++S K+ I I KPD+I+YN V+ R R+ D F
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+ +G+VPD I+YNT + + + + R M + G +P+ TY +++D + +
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 222 GNIEESLRLFNDMK 235
+E+ D++
Sbjct: 783 NRKDEAKLFVEDLR 796
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 35/179 (19%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A+++ E+A+ ++ + PDL TYN VL L R G A M++
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCL-----IY-------------------------- 195
P+ ++Y +LL+ + + L +Y
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 196 ----FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F E+ E G PD+ T +++ +GR + ++ + + MK++ PS+ Y SL+
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 41/204 (20%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY------------------------- 141
N ++ A A+ E++ + ++ +CKP+ +TY
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 142 ------NIVLDILGRVGRVNDMLNE----FASMKEAGVVPDFISYNTLLN---NLRKIRR 188
++L L V D+L E F+ +KE G PD + N++++ + + +
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ L Y M E G P + TY +L+ R+ + +S + ++ + I+P I Y +
Sbjct: 648 ANGVLDY---MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 249 LIDNLKKMGKVDLAMTIFEEMNSS 272
+I + ++ A IF EM +S
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNS 728
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 51/109 (46%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ E++ II N +I+A+ ++ ++ A IF ++ PD+ITYN +
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+ + M + G P+ +YN++++ K+ R D ++ ++
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 5/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I G + A L+ ++ K F P YN V+ + + + ++ ++L
Sbjct: 264 NTLISAYSSQGLMEEAFELMHAMPSKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEML 322
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + S Y + D + IF + + P+ ++ + ++ F +S +
Sbjct: 323 RSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPD-LVCFSSMMSLFTRSGNL 381
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KAL+ F+ +K PD + Y I++ R G +++ +N M + G D ++YNT+
Sbjct: 382 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTI 441
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L K + L F EM E G+ PD T T LID + GN++ ++ LF MK+++I
Sbjct: 442 LHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRI 501
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + Y +L+D K+G +D A I+ +M S
Sbjct: 502 KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 533
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 128/273 (46%), Gaps = 11/273 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCK G A + + LR Y +L+ + + D + I D+
Sbjct: 299 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDM-- 356
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
SR + D C+++ F + + + L++ V + ++ +I + + I
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 416
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISY 176
+A+ + + + C D++TYN +L L + +G + + NE M E G+ PD +
Sbjct: 417 SEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE---MTERGLFPDSYTL 473
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L++ K+ L + F++M E IK D++TY L+D FG+ G+I+ + ++ DM
Sbjct: 474 TILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 533
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++I P+ + L++ L G + A +++EM
Sbjct: 534 KEILPTPISFSILVNALCSKGHLSEAFRVWDEM 566
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 9/242 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK GN+ A+ L + +++K I L YN +L + DID + +I D++
Sbjct: 477 IDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 536
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ ++ A ++ +E++ + ++++ N +I + +S +
Sbjct: 537 LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEI 596
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA-----SMKEAGVVPDFISYNTL 179
+ + PD I+YN + I G V N M F K+ G+VPD +YN++
Sbjct: 597 FLEKMISEGFVPDCISYNTL--IYGFVKEEN-MSKAFGLVKKMEEKQGGLVPDVFTYNSI 653
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ + ++ R+M E G+ PD TYT+LI+ F N+ E+ R ++M Q+
Sbjct: 654 LHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGF 713
Query: 240 RP 241
P
Sbjct: 714 SP 715
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 121/280 (43%), Gaps = 20/280 (7%)
Query: 6 IEKLCKAGNVSAAVR-LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I L ++G +S A +L+ +R + N ++ + D F +L V +R
Sbjct: 110 IHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQAR 169
Query: 65 TLSSDCYTNF----ARAFIMTDDCTQLLI--------------FIEEVVQIASPESIIVV 106
L + Y F ++ + ++ D LI +E+ + ++ +
Sbjct: 170 KLR-EAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTL 228
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ A K ++EK ++ PD++TYN ++ G + + +M
Sbjct: 229 NIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPS 288
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G P +YNT++N L K + + F EM SG+ PD TY +L+ + G+ E
Sbjct: 289 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVE 348
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ +F+DM+ + + P + + S++ + G +D A+ F
Sbjct: 349 TENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 388
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/262 (18%), Positives = 120/262 (45%), Gaps = 3/262 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
CK G+ + +R +++ +P+ ++ ++ + ++D + + +
Sbjct: 341 CKKGDAVETENIFSDMRSRDV-VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 399
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ YT + + ++ + E++Q ++ N I+ K + + +A +F+
Sbjct: 400 NVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 459
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ PD T I++D ++G + + + F MKE + D ++YNTLL+ K+
Sbjct: 460 EMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVG 519
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+D + +M I P ++++ L+++ G++ E+ R++++M + I+P++ +
Sbjct: 520 DIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICN 579
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
S+I + G E+M
Sbjct: 580 SMIKGYCRSGNASDGEIFLEKM 601
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ A+ +F +K + K D++TYN +LD G+VG ++ +A M
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
++P IS++ L+N L L + EM IKP ++ ++I + R+GN +
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGE 595
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
M + P Y +LI K + A + ++M L
Sbjct: 596 IFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGL 643
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 135/275 (49%), Gaps = 6/275 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+V+ A L + + + I P+ YN V+ A + +D + L+ +
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYNSVVHALCKARAMDKAEAFLRQM- 280
Query: 61 VSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V+ R L ++ Y N + T + + +E+ + + ++ ++ ++ + K +I
Sbjct: 281 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +FD + PD+ +YNI+L+ G + DM + F M G+ PDF ++N L
Sbjct: 341 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 400
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ LD +I F EM + G+KPD++TY +I + R G +++++ FN M Q +
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEE-MNSSL 273
P Y Y LI G + A + E MN+ +
Sbjct: 461 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 495
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C P+++ YN V+D + G VN + F M + G+ PD ++YN++++ L K R +D
Sbjct: 212 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 271
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ R+M + P+ TY LI + TG +E++R+F +M++ I P + L+
Sbjct: 272 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+L K GK+ A +F+ M
Sbjct: 332 GSLCKYGKIKEARDVFDTM 350
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ + + + L + +V +++V ++ + K +I++ L +F +
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 596
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
KP I Y+I++D L + GR +F M E+G+ D +YN +L L K R D
Sbjct: 597 QRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 656
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F+E+ +K +++T +ID +T +EE+ LF + + ++ PS+ Y +I
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMI 716
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
NL K G V+ A +F M ++
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNA 738
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ G + A+ + +RD + P+ Y V+ A +D + + ++
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGV-KPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + F + I E++ I+ + II K ++
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IFD + PD + Y++++D VG++ L F +M AG+ P+ + Y TL+
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 576
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N KI R+D L FREM + GIKP + Y+ +ID + G + F++M + I
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 636
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y ++ L K D A+ +F+E+ +
Sbjct: 637 MDICTYNIVLRGLFKNRCFDEAIFLFKELRA 667
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D + +E+VQ P ++ N ++ A K+R ++KA +
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 281
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ P+ TYN ++ G+ + + F M+ ++PD ++ + L+ +L K ++
Sbjct: 282 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M G PD+ +Y +++ + G + + LF+ M I P Y + LI
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 401
Query: 251 DNLKKMGKVDLAMTIFEEM 269
G +D AM IF EM
Sbjct: 402 KAYANCGMLDKAMIIFNEM 420
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA + A L+ + +K + LPN YN ++ + T + ++ K++
Sbjct: 258 NSVVHALCKARAMDKAEAFLRQMVNKRV-LPNNWTYNNLIYGYSSTGQWKEAVRVFKEM- 315
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLI------FIEEVVQIASPESIIVVNRIIFAFA 114
++ D T + +M C I F ++ +P+ + N ++ +A
Sbjct: 316 -RRHSILPDVVT---LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD-VFSYNIMLNGYA 370
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ +FD + G PD T+N+++ G ++ + F M++ GV PD +
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 430
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y T++ L +I ++D + F +M + G+ PD Y LI F G++ ++ L +++
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI 490
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ I + S+I+NL K+G+V A IF+
Sbjct: 491 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 523
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 5/232 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+ NGY CK G + + L + + + I +++ + ++ +
Sbjct: 575 LVNGY----CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEM 630
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFI-EEVVQIASPESIIVVNRIIFAFAKSRQI 119
S C N + + C IF+ +E+ + +II +N +I ++R++
Sbjct: 631 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 690
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A +F I + P ++TY+I++ L + G V + + F+SM+ AG P+ N +
Sbjct: 691 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 750
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ L K + Y ++ E + LT L+D F G E +R
Sbjct: 751 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L E++Q S I+ + II ++ + A + F + D+ TYNIVL
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRG 648
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + ++ + F ++ V + I+ NT+++ + + RR++ F + S + P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 708
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA---MT 264
++TY+ +I + + G +EE+ +F+ M+ P+ + ++ L K ++ A ++
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 768
Query: 265 IFEEMNSSLSDL 276
+E N SL L
Sbjct: 769 KIDERNFSLEHL 780
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L G L + ++ P+ Y+ ++ A + D + +L ++
Sbjct: 194 NSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMK 253
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT D+ L EE+ + +I K+ +++
Sbjct: 254 DNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLD 313
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A F ++ C+PD + N +++ LG+ GR++D + F M+ +P ++YNT++
Sbjct: 314 EAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTII 373
Query: 181 NNLRKIR-RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + R+ +F M SGI P TY+ LID F +T E+++ L +M ++
Sbjct: 374 KALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGF 433
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y SLID L K + DLA +F+E+ +
Sbjct: 434 PPCPAAYCSLIDALGKAKRYDLANELFQELKEN 466
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 10/208 (4%)
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV---VNRIIFAFAKSRQIEKALL 124
+ Y R + + ++ I+E+V+ +P ++ ++ II ++ I KA+
Sbjct: 119 TSTYMALIRCLEVVEQYGEMWKMIQEMVR--NPVCVVTPMELSDIIRMLGNAKMISKAVA 176
Query: 125 IFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
IF IK KC+P YN ++ +L G +V+++ NE ++ E PD ++Y+ L++
Sbjct: 177 IFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSN--EGQCFPDTVTYSALIS 234
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ R D + EM ++G++P YT L+ + N+ +L LF +M+ Q RP
Sbjct: 235 AFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRP 294
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y LI L K G++D A F EM
Sbjct: 295 DVFTYTELIRGLGKAGRLDEAYNFFHEM 322
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 10/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAET----NDIDLSFQIL 56
N I L KAG + A++L + + +P+ YN ++ A E+ ++I F+ +
Sbjct: 335 NNMINFLGKAGRLDDAIKLFEEMETLRC-IPSVVTYNTIIKALFESKSRVSEISSWFERM 393
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K +S + Y+ F T+ + ++ +EE+ + P +I A K+
Sbjct: 394 KGSGISPSPFT---YSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 450
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ + A +F +K Y +++ LG+ GR++D ++ F M G P+ +Y
Sbjct: 451 KRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAY 510
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ L + LD L R M + G PD+ +Y ++++ +TG + ++ + +MKQ
Sbjct: 511 NALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQ 570
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I+P Y +++ L G + A + +EMN+
Sbjct: 571 SAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNA 605
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 39/256 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK A+ LL+ + +K P AY ++ A + DL+ ++ ++L
Sbjct: 409 IDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQEL----- 463
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+C ++ AR + + +I K+ +++ A+
Sbjct: 464 --KENCGSSSARVYAV----------------------------MIKHLGKAGRLDDAVD 493
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD + L C P++ YN ++ L R G +++ L M++ G +PD SYN +LN L
Sbjct: 494 LFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALA 553
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K D + M +S IKPD ++Y ++ + G EE+ +L +M +
Sbjct: 554 KTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLI 613
Query: 245 VYRSLIDNLKKMGKVD 260
Y S+ L+ +GKVD
Sbjct: 614 TYSSI---LEAIGKVD 626
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEA 167
+I F K+ + EKA+++ + + P Y ++D LG+ R D+ NE F +KE
Sbjct: 408 LIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY-DLANELFQELKEN 466
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
Y ++ +L K RLD + F EM G P++ Y AL+ R G ++E+
Sbjct: 467 CGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEA 526
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L M+ P I Y +++ L K G D AM + M S
Sbjct: 527 LTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQS 571
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
Y+ ++ A + D +F++ ++ + + YT + + L +EE+
Sbjct: 233 YSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMK 292
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
++ +I K +++ A +F ++ CKPD++ N +++ILGR GR+
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE 352
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR-LDLCLIYFREMGESGIKPDLLTYTAL 214
D L F M P+ ++YNT++ + + + ++F +M +GI P TY L
Sbjct: 353 DALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAIL 412
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ID F +T +E++L L +M ++ P Y SLID+L + + + A +F+E+
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQEL 467
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Query: 97 IASPESI--IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRV 151
I SP S+ + I+ K++ + KAL +F IKG KC P YN ++ +L G
Sbjct: 151 IRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHH 210
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
+++++ NE S E PD I+Y+ L++ K+ R D F EM E+G+ P Y
Sbjct: 211 EKIHELYNEICS--EGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIY 268
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T ++ + + +E +LRL +MK + P+++ Y LI L K+G+VD A ++F M
Sbjct: 269 TTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNM 326
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA----SAETNDIDLSFQIL 56
N I L +AG + A++L + D PN YN V+ A A ++ L F+ +
Sbjct: 339 NNLINILGRAGRLEDALKLFGKM-DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKM 397
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K ++ SS Y F T+ + L+ +EE+ + P +I + ++
Sbjct: 398 KANGIAP---SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRA 454
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ E A +F +K + Y +++ G GR++D ++ F MK+ G PD +Y
Sbjct: 455 KRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTY 514
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ + + +D R M E+G PD+ ++ +++ +TG + ++ +F MK+
Sbjct: 515 NALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKE 574
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I P Y +++ L + G ++A + EM
Sbjct: 575 SEIMPDAVSYNTILSCLSRAGMFEMAAKLMREM 607
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
V N +I EK +++ I +G C PD ITY+ ++ G++ R + F
Sbjct: 196 VYNTLILMLMHEGHHEKIHELYNEICSEG-NCSPDTITYSALISAFGKLERYDFAFRLFD 254
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
MKE G+ P Y T+L K+ +++ L EM G P + TYT LI G+ G
Sbjct: 255 EMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVG 314
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++++ LF +M + +P + + +LI+ L + G+++ A+ +F +M+S
Sbjct: 315 RVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDS 363
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD-ILGRVGRVNDMLNEF 161
++++N +I ++ ++E AL +F + L+C P+++TYN V+ I ++ F
Sbjct: 335 VVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWF 394
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK G+ P +Y L++ K R++ L+ EM E G P Y +LIDS GR
Sbjct: 395 EKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRA 454
Query: 222 -----------------------------------GNIEESLRLFNDMKQQQIRPSIYVY 246
G + +++ LF +MK+ P +Y Y
Sbjct: 455 KRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTY 514
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+L+ + + G +D A ++ M
Sbjct: 515 NALMSGMIRAGMIDEAHSLMRNM 537
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F ++ A+ +F +K L C PD+ TYN ++ + R G +++ + +M+E G
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENG 541
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD S+N +LN L K + F +M ES I PD ++Y ++ R G E +
Sbjct: 542 CTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAA 601
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+L +MK + Y S+ L+ +GKVD
Sbjct: 602 KLMREMKLKGFEYDSITYSSI---LEAVGKVD 630
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP++I + +I AF K + + A +FD +K P Y +L + ++ +V L
Sbjct: 227 SPDTI-TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAAL 285
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
MK G P +Y L+ L K+ R+D F M + G KPD++ LI+
Sbjct: 286 RLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINIL 345
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
GR G +E++L+LF M Q P++ Y ++I + + A FE+M ++
Sbjct: 346 GRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K+ ++EKALL+ + + P Y ++D LGR R F +KE
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENC 471
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
Y ++ + RL + F EM + G PD+ TY AL+ R G I+E+
Sbjct: 472 GRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAH 531
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L +M++ P I + +++ L K G A+ +F +M S
Sbjct: 532 SLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES 575
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 133/270 (49%), Gaps = 6/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I LC++G A++L + D++ +LP A VA + TN +D + +L
Sbjct: 115 IAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTKGSRLG 174
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ--IASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + I + E +Q + SP+ + N +I + +K
Sbjct: 175 CCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPD-VWSFNVVIKGVCRMGNFQK 233
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV-VPDFISYNTLL 180
AL + + + C PD IT+NI++D L R +VN ++ GV +P+ ++Y +++
Sbjct: 234 ALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVI 293
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +++ + + +M ESG +P+ +TY LI+ +G+ ++E ++R++ + +
Sbjct: 294 SGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCP 353
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P + + SLID + G++D A I++EM
Sbjct: 354 PDVVTFSSLIDGYCRCGQLDDAKRIWKEMG 383
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 116/267 (43%), Gaps = 38/267 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+A V+ +L+ L+ + +PNA Y V+ + ++ + + D+L S
Sbjct: 257 VDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLES- 315
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + + N +I + K+ +E A+
Sbjct: 316 ----------------------------------GTRPNTVTYNVLINGYGKALDMESAV 341
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + C PD++T++ ++D R G+++D + M + P+ +++ ++++L
Sbjct: 342 RMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSL 401
Query: 184 RKIRRLDLCLIYFREMG-ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K R L RE+ + I P Y +ID + G ++E+ + DMK++ P
Sbjct: 402 CKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPD 461
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y LI G++ A+T+F +M
Sbjct: 462 KYTYTILIIGHCMKGRIPEAITLFHKM 488
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E CK A++LL +RDK P+ YN V+ + +D + + LK+L
Sbjct: 74 LEATCKRSGYKQAMKLLDEMRDKGC-TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 132
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII------------- 110
++ Y + + + E+ Q P +++ N +I
Sbjct: 133 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 192
Query: 111 ----------------------FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
AF K ++++KA+ D + C PD+++YN +L L
Sbjct: 193 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 252
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G V+ + +K+ G P ISYNT+++ L K + L EM G++PD+
Sbjct: 253 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 312
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY+ + R IE+++R F ++ IRP+ +Y ++I L K + A+ +F
Sbjct: 313 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 372
Query: 269 M 269
M
Sbjct: 373 M 373
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN ++ +D + +++ ++ V + Y R L ++E+
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYT---YNTLIRGLCGRGRTANALAVLDEM 58
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
++ ++ ++ A K ++A+ + D ++ C PD++TYN+V++ + + GRV
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+D + ++ G P+ +SYN +L L R + EMG+ G P+++T+ L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I R G +E +L + + + P+ Y L+ K K+D AM + M S
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 235
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC A A L+ + K PN +N ++ ++ + ++L+ +
Sbjct: 144 LKGLCTAERWEDAEELMGEMGQKGC-PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T +S Y AF + + F++ +V I+ N ++ A +S +++ A+
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ +K C P LI+YN V+D L + G+ + L M G+ PD I+Y+T+ L
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F ++ + GI+P+ + Y A+I + ++ LF M P+
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 382
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI+ L G + A + +E+ S
Sbjct: 383 STYTILIEGLAYEGLIKEARDLLDELCS 410
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G V A+ LL ++++ + PN YN ++ ++ +++ + +++++L
Sbjct: 219 NTMLDSYCKEGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEML 277
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S +S+ Y F + +EE+V + ++ N +++ K Q+
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 337
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
L F + K PD++++N +L R G +++ F +K +VP I+YNTL+
Sbjct: 338 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 397
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L LD L +EM + G+ PD+ TYT L++ + G + + FN+M + ++
Sbjct: 398 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 457
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y + I K+ +A ++ EEM
Sbjct: 458 PDRFAYNTRIVGEMKIADTSVAFSMQEEM 486
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 38/290 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN---------------------------- 34
N I LC G + AA+RL + + D+ +F P+
Sbjct: 394 NTLIHGLCMWGYLDAALRLKKEMTDQGLF-PDIFTYTILVNGCFKLGYVSMARGFFNEML 452
Query: 35 ---------AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCT 85
AYN +V + D ++F + +++L + Y F A +
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFE 512
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ +E +V + II F K+ + KA +F+ + P ++TY +++
Sbjct: 513 EACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLI 572
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
++ F+ M E V + I+YN ++N L RR+D YF EM E GI
Sbjct: 573 HAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGIL 632
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
P+ +YT LI+ G EE+LRL+ +M ++I+P + + + NL +
Sbjct: 633 PNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHR 682
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
NRI+ + KA ++ ++ KP ++TYN +LD + GRV+ L + M+E
Sbjct: 184 NRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQE 243
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G P+ ++YN L+N L K L+ EM SG+ TY LI+ F + G E
Sbjct: 244 RGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVE 303
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L +M ++ P++ Y +L+ L K +V F +M
Sbjct: 304 AFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%)
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
LL+FD + PD+ N +L +L ++ N + M++ G+ P ++YNT+L++
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K R+D L EM E G P+ +TY L++ + G +E++ L +M + S
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y LI+ + G A + EEM
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEM 311
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M G++PD + N +L LR L + M + GIKP ++TY ++DS+ +
Sbjct: 168 FDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCK 227
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM-NSSLS 274
G ++++L L ++M+++ P+ Y L++ L K G+++ A + EEM NS L+
Sbjct: 228 EGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN 282
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 13/275 (4%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN YI+ LCK + A+++++ +R K +P+ V N+ S + +
Sbjct: 263 CNIYIDCLCKQNRLHDALQMVEKMRGKGT-IPDVVTYTTVVGCLCNNKRFSEAVGLWEEM 321
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS-------PESIIVVNRIIFAFA 114
L D A F + + +EE ++AS S+ + N +I F
Sbjct: 322 VKMGLKPDVVACGALIFGLCKNSK-----VEEAFELASRMLSLNIELSVSIYNALISGFW 376
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ I+KA I ++ C+P ++TYNI+L+ +G + N M+ +GV PD
Sbjct: 377 RAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRY 436
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYN LL L K +LD + + E G D+++ LID+F + ++ +L LF +M
Sbjct: 437 SYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEM 496
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ Y +LI+ L +G +LA +FE+M
Sbjct: 497 DYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQM 531
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +AG++ A ++ +R N P YN +L ++ + ++ +
Sbjct: 369 NALISGFWRAGSIDKAYTIISFMR-TNGCEPGVVTYNILLNHYCTIGMMEKAENLITKME 427
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + T + F+ + +++ I+ N +I AF K ++++
Sbjct: 428 TSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVK 487
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL +F + + D +TY +++ L VG N F M +A + P+ YN +L
Sbjct: 488 SALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIML 547
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++L K+ L F M + I PD++TY LI G+ E+L LF DM+ + +
Sbjct: 548 HHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVE 607
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P ++ LI+ L G+ LA ++E M
Sbjct: 608 PDSLTFKYLINGLLDEGRSTLAYEVWEYM 636
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 129/276 (46%), Gaps = 11/276 (3%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
C I LCK V A L + NI L + YN ++ ID ++ I+ +
Sbjct: 333 CGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMR 392
Query: 61 VSS---RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ ++ + N M + L+ +E +P+ N+++ K+
Sbjct: 393 TNGCEPGVVTYNILLNHYCTIGMMEKAENLITKME--TSGVNPDRY-SYNQLLKGLCKTH 449
Query: 118 QIEKAL-LIFDHIK-GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
Q++KA + DH++ G C D+++ NI++D +V +V L F M G+ D ++
Sbjct: 450 QLDKAFAFVSDHMEVGGFC--DIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVT 507
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y TL+N L + +L F +M ++ I P++ Y ++ + G+++ + ++F M
Sbjct: 508 YGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMI 567
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Q++I P I Y +LI L K + A+ +F++M +
Sbjct: 568 QKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRT 603
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+R I A +S +IE + + PD+ NI +D L + R++D L M+
Sbjct: 229 SRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRG 288
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +PD ++Y T++ L +R + + EM + G+KPD++ ALI + +EE
Sbjct: 289 KGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEE 348
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ L + M I S+ +Y +LI + G +D A TI M ++
Sbjct: 349 AFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTN 394
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ I N I K ++ AL + + ++G PD++TY V+ L R ++ +
Sbjct: 257 SPD-IWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAV 315
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ M + G+ PD ++ L+ L K +++ M I+ + Y ALI F
Sbjct: 316 GLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGF 375
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
R G+I+++ + + M+ P + Y L+++ +G ++ A + +M +S
Sbjct: 376 WRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETS 429
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KGL P TY+ + L + R+ + A M G PD + N ++ L K RL
Sbjct: 219 KGLCLTP--FTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRL 276
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L +M G PD++TYT ++ E++ L+ +M + ++P + +L
Sbjct: 277 HDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGAL 336
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
I L K KV+ A + M S
Sbjct: 337 IFGLCKNSKVEEAFELASRMLS 358
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
Y+ ++ A + D +F++ ++ + + YT + + L +EE+
Sbjct: 233 YSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMK 292
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
++ +I K +++ A +F ++ CKPD++ N +++ILGR GR+
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE 352
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR-LDLCLIYFREMGESGIKPDLLTYTAL 214
D L F M P+ ++YNT++ + + + ++F +M +GI P TY L
Sbjct: 353 DALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAIL 412
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ID F +T +E++L L +M ++ P Y SLID+L + + + A +F+E+
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQEL 467
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Query: 97 IASPESI--IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRV 151
I SP S+ + I+ K++ + KAL +F IKG KC P YN ++ +L G
Sbjct: 151 IRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHH 210
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
+++++ NE S E PD I+Y+ L++ K+ R D F EM E+G+ P Y
Sbjct: 211 EKIHELYNEICS--EGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIY 268
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T ++ + + +E +LRL +MK + P+++ Y LI L K+G+VD A ++F M
Sbjct: 269 TTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNM 326
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 127/273 (46%), Gaps = 10/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA----SAETNDIDLSFQIL 56
N I L +AG + A++L + D PN YN V+ A A ++ L F+ +
Sbjct: 339 NNLINILGRAGRLEDALKLFGKM-DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKM 397
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K ++ SS Y F T+ + L+ +EE+ + P +I + ++
Sbjct: 398 KANGIAP---SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRA 454
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ E A +F +K + Y +++ G GR++D ++ F ++ G PD +Y
Sbjct: 455 KRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTY 514
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ + + +D R M E+G PD+ ++ +++ +TG + ++ +F MK+
Sbjct: 515 NALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKE 574
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I P Y +++ L + G ++A + EM
Sbjct: 575 SEIMPDAVSYNTILSCLSRAGMFEMAAKLMREM 607
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
V N +I EK +++ I +G C PD ITY+ ++ G++ R + F
Sbjct: 196 VYNTLILMLMHEGHHEKIHELYNEICSEG-NCSPDTITYSALISAFGKLERYDFAFRLFD 254
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
MKE G+ P Y T+L K+ +++ L EM G P + TYT LI G+ G
Sbjct: 255 EMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVG 314
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++++ LF +M + +P + + +LI+ L + G+++ A+ +F +M+S
Sbjct: 315 RVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDS 363
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD-ILGRVGRVNDMLNEF 161
++++N +I ++ ++E AL +F + L+C P+++TYN V+ I ++ F
Sbjct: 335 VVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWF 394
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK G+ P +Y L++ K R++ L+ EM E G P Y +LIDS GR
Sbjct: 395 EKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRA 454
Query: 222 GNIEESLRLFNDMKQQQIR-----------------------------------PSIYVY 246
E + LF ++K+ R P +Y Y
Sbjct: 455 KRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTY 514
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+L+ + + G +D A ++ M
Sbjct: 515 NALMSGMIRAGMIDEAHSLMRNM 537
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP++I + +I AF K + + A +FD +K P Y +L + ++ +V L
Sbjct: 227 SPDTI-TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAAL 285
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
MK G P +Y L+ L K+ R+D F M + G KPD++ LI+
Sbjct: 286 RLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINIL 345
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
GR G +E++L+LF M Q P++ Y ++I + + A FE+M ++
Sbjct: 346 GRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K+ ++EKALL+ + + P Y ++D LGR R F +KE
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENC 471
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
Y ++ + RL + F E + G PD+ TY AL+ R G I+E+
Sbjct: 472 GRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAH 531
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L +M++ P I + +++ L K G A+ +F +M S
Sbjct: 532 SLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES 575
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
Query: 48 DIDLSFQILKDLLVSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQ-IASPESII 104
+I++ Q K R DC T A R ++ I+EVV+ +
Sbjct: 105 EINVKIQFFK-WAGKRRNFQHDCSTYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPV 163
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V++ ++ A +++ + KAL +F KG KCKP TYN V+ +L + G+ + + M
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 165 -KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
E PD I+Y+ L+++ K+ R D + F EM ++ ++P YT L+ + + G
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++L LF +MK+ P++Y Y LI L K G+V+ A +++ M
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNM 329
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT + + L EE+ + ++ +I K+ ++E+A ++ ++
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNML 330
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR-L 189
PD++ N +++ILG+VGR+ ++ N F M P +SYNT++ L + + +
Sbjct: 331 TDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPV 390
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+F +M G+ P TY+ LID + +T +E++L L +M ++ P Y SL
Sbjct: 391 SEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 250 IDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
I+ L K + + A +F+E+ + +++
Sbjct: 451 INALGKAKRYEAANELFKELKENFGNVS 478
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 4/262 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G V A+ L + ++ P Y ++ + ++ ++ + K++L T
Sbjct: 280 KVGKVEKALDLFEEMKRAGC-SPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDV 338
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ-IEKALLIFD 127
N +L E+ +++ N +I A +S+ + + FD
Sbjct: 339 VFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFD 398
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K P TY+I++D + RV L M E G P +Y +L+N L K +
Sbjct: 399 KMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R + F+E+ E+ Y +I FG+ G + E++ LFN+MK Q P +Y Y
Sbjct: 459 RYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+L+ + K G V+ A ++ +M
Sbjct: 519 ALMSGMVKAGMVNEANSLLRKM 540
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 108/239 (45%), Gaps = 7/239 (2%)
Query: 35 AYNCVLVA----SAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
+YN V+ A A +++ F +K VS + Y+ + T+ + L+
Sbjct: 375 SYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFT---YSILIDGYCKTNRVEKALLL 431
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+EE+ + P +I A K+++ E A +F +K Y +++ G+
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G++++ ++ F MK G PD +YN L++ + K ++ R+M E+G D+ +
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINS 551
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++ F RTG ++ +F MK I+P Y +L+ G + A + EM
Sbjct: 552 HNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREM 610
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK V A+ LL+ + +K P AY ++ A + + + ++ K+L +
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+SS Y + F ++ + E+ S + N ++ K+ + +A
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANS 535
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ ++ C D+ ++NI+L+ R G + F +MK G+ PD ++YNTLL
Sbjct: 536 LLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFA 595
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ REM + G + D +TY++++D+ G
Sbjct: 596 HAGMFEEAARLMREMKDKGFEYDAITYSSILDAVG 630
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I + +I ++ K + + A+ +FD +K +P Y +L I +VG+V L+ F
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK AG P +Y L+ L K R++ ++ M G+ PD++ L++ G+ G
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGR 353
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+EE +FN+M + P++ Y ++I L + V + F++M +D P +F
Sbjct: 354 LEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMK---ADGVSPSEF 410
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 36/200 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---------------- 152
+I A + + +A+++F ++ CKP LITYN++L++ G++G
Sbjct: 39 LITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNA 98
Query: 153 ----------------RVNDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
R + E F MK G VPD ++YNTLL+ K RR+
Sbjct: 99 GILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEA 158
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ REM +G P ++TY +LI ++ R G +EE++ L N M ++ I+ ++ Y +++
Sbjct: 159 IEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSG 218
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
+ GK + AM +FEEM ++
Sbjct: 219 FVRTGKDESAMRVFEEMRTA 238
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-----CVLVASAETNDIDLSFQILKDLL 60
I L K G VS A LL +L K+ F P+ Y V++ + + F+ +++
Sbjct: 5 INMLGKEGKVSVAASLLNNLH-KDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 61 VSSRTLSSDCYTN-FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ + N + + + + T L E + N +I +
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKITGLF---EGMKNAGILPDEYTYNTLITCCRRGSLY 120
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A +F+ +K + PD +TYN +LD+ G+ R+ + + M+ G P ++YN+L
Sbjct: 121 EEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSL 180
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ + L+ + +M E GIK D+ TYTA++ F RTG E ++R+F +M+
Sbjct: 181 ISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGC 240
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P+I + +LI GK M +FEE+
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEI 270
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 112/238 (47%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ A A ++ + ++ ++ L YT F+ T + EE+
Sbjct: 177 YNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMR 236
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+I N +I + + + +F+ IK C PD++T+N +L + G+ G +
Sbjct: 237 TAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDS 296
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ F MK G VP+ +YNTL++ + D + ++ M ++GI PDL TY A++
Sbjct: 297 EVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVL 356
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ R G E+S ++ +M+ +P+ + SL+ ++ + + EE+ S +
Sbjct: 357 AALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGV 414
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 127/267 (47%), Gaps = 4/267 (1%)
Query: 10 CKAGNV-SAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C+ G++ A + + ++ F+P+ YN +L ++ I + ++L+++ V+ +
Sbjct: 114 CRRGSLYEEAAAVFEDMKSMG-FVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSP 172
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + A+ + + ++V+ + ++ F ++ + E A+ +F
Sbjct: 173 SIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVF 232
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ ++ CKP++ T+N ++ + G G+ +M+ F +K VPD +++NTLL +
Sbjct: 233 EEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQN 292
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F+EM G P+ TY LI ++ R G+ ++++ ++ M I P + Y
Sbjct: 293 GMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTY 352
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+++ L + G + + I EM +
Sbjct: 353 NAVLAALARGGLWEQSEKILAEMQDGM 379
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 129/314 (41%), Gaps = 48/314 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I + G+ A+ + + + D I P+ YN VL A A + S +IL ++
Sbjct: 318 NTLISAYSRCGSFDQAMAMYKRMLDTGI-TPDLSTYNAVLAALARGGLWEQSEKILAEMQ 376
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + A+ + ++L EE+ +++ ++ +K +
Sbjct: 377 DGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLL 436
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAG--------- 168
+A F +K PDL T N ++ I GR V + N++LN MKE+G
Sbjct: 437 EAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILN---FMKESGFTPSLATYN 493
Query: 169 --------------------------VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+ PD ISYNT++ + R+ F EM ES
Sbjct: 494 SLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRES 553
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G+ PD++TY + S+ EE++ + M + +P+ Y S+ID K+ + D A
Sbjct: 554 GLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDA 613
Query: 263 MTIFEEMNSSLSDL 276
+ SSL +L
Sbjct: 614 IKFI----SSLHEL 623
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N +++ ++S E++ + I KPD+I+YN V+ R GR+ + + F
Sbjct: 488 SLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIF 547
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+E+G++PD I+YNT + + + + M + G KP+ TY ++ID + +
Sbjct: 548 SEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKL 607
Query: 222 GNIEESLRLFNDMKQQQIRPSI 243
+++++ + + ++ P I
Sbjct: 608 NRRDDAIKFISSL--HELDPHI 627
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+++++LG+ G+V+ + ++ + G PD +Y +L+ R ++ F++M E
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLR-LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G KP L+TY +++ +G+ G + LF MK I P Y Y +LI ++ +
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122
Query: 262 AMTIFEEMNS 271
A +FE+M S
Sbjct: 123 AAAVFEDMKS 132
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K ++ A + +++ +PD+ Y ++ GR + + F M+E G
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 169 VVPDFISYNTLLNNLRKIRR-LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
P I+YN +LN K+ + F M +GI PD TY LI R EE+
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEA 123
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F DMK P Y +L+D K ++ A+ + EM
Sbjct: 124 AAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREM 165
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 10/248 (4%)
Query: 31 FLP--NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
F+P + YN ++ A + D + + K +L + T Y A Q
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSE 369
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ E+ + + ++ A+A ++I + L + + I C + + ++L L
Sbjct: 370 KILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEI----CSGVIEPHAVLLKTL 425
Query: 149 GRVGRVNDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
V D+L E F +K G PD + N ++ + + + M ESG
Sbjct: 426 VLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGF 485
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
P L TY +L+ ++ N E S + ++ + I+P I Y ++I + G++ A
Sbjct: 486 TPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASH 545
Query: 265 IFEEMNSS 272
IF EM S
Sbjct: 546 IFSEMRES 553
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 14/283 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K + AA R+ + K P+ ++ ++ +D ++L ++
Sbjct: 357 NSMIDGFSKQNRLDAAERMFYLMATKGCS-PDVITFSILIDGYCGAKRVDDGMKLLHEMS 415
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT F + L ++E++ +++ N ++ + +++
Sbjct: 416 RRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLK 475
Query: 121 KALLIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
AL +F ++ K +PD+ TYNI++ L G+ ++ + M G+
Sbjct: 476 DALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGL 535
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
VPD I+YN++++ L K RLD F MG G PD++T+T LI+ + + G + + L
Sbjct: 536 VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLE 595
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+F +M ++ I + YR+LI ++G ++ A+ IF+EM SS
Sbjct: 596 VFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISS 638
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 8/282 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDLL 60
++ +CK G+ +A+ LL+ + + + PN Y+ + L D F +++
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG 278
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S + +C N F + ++ + E+ + ++ + +I A K +
Sbjct: 279 ISPNLFTYNCMIN---GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFF 335
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +++ + P+ ITYN ++D + R++ F M G PD I+++ L+
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILI 395
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +R+D + EM G+ + +TYT LI F + GN+ +L L +M +
Sbjct: 396 DGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVC 455
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
P++ +L+D L GK+ A+ +F+ M S DL F
Sbjct: 456 PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPF 497
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 107/248 (43%), Gaps = 23/248 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I C+ GN++AA+ LLQ + + PN C + N+ L KD L +
Sbjct: 430 IHGFCQLGNLNAALDLLQEMISSGV-CPNVVTCNTLLDGLCNNGKL-----KDALEMFKV 483
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ M D + +E VQ N +I + +A +
Sbjct: 484 MQKS---------KMDLDASHPFNDVEPDVQ--------TYNILICGLINEGKFSEAEEL 526
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ + PD ITYN V+D L + R+++ F SM G PD +++ TL+N K
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCK 586
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ R+ L F EMG GI + +TY LI F + GNI +L +F +M + P
Sbjct: 587 VGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTIT 646
Query: 246 YRSLIDNL 253
R+++ L
Sbjct: 647 IRNMLTGL 654
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 125/267 (46%), Gaps = 4/267 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC+ G V AV LL + + + PN Y ++ + D + +L+ + SR
Sbjct: 187 LCREGRVVEAVALLDRMVEDGL-QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIK 245
Query: 67 SSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y+ T E+ + ++ N +I F S + +A +
Sbjct: 246 PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRL 305
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ K PD++T++++++ L + G+ + + M G++P+ I+YN++++ K
Sbjct: 306 LREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
RLD F M G PD++T++ LID + +++ ++L ++M ++ + +
Sbjct: 366 QNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTIT 425
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LI ++G ++ A+ + +EM SS
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISS 452
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 21/194 (10%)
Query: 94 VVQIASPESIIVVNR----------------IIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
VV++ P+ +I ++R +I F ++ AL F I L P
Sbjct: 86 VVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPS 145
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L+T++ +L L RV++ L+ F + + P+ I++ TL+N L + R+ +
Sbjct: 146 LVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLD 201
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKM 256
M E G++P+ +TY ++D + G+ +L L M++ +I+P++ +Y ++ID L K
Sbjct: 202 RMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKD 261
Query: 257 GKVDLAMTIFEEMN 270
G+ A +F EM
Sbjct: 262 GRQTDAQNLFSEMQ 275
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN +L A ++ ++ ++ K++ + Y + + Q + ++
Sbjct: 804 YNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLM 863
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ ++ KS ++ A +F+ + C+P+ YNI+L+ G
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTE 923
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ F M E G+ PD SY L++ L RL+ L YFR++ E G++PDL+ Y LI
Sbjct: 924 NVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLI 983
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D G++ IEE++ LFN+MK++ I P++Y Y SLI +L K GK A ++EE+
Sbjct: 984 DGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEEL 1037
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 2/240 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+Y V+ A + +D + + ++ + Y + F+ D + L +
Sbjct: 348 SYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHM 407
Query: 95 VQIA-SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
SP V I + + KS Q KA+ ++H+K PD+ N VL L GR
Sbjct: 408 NACGPSPNGYTHVLFINY-YGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGR 466
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ F +K GV PD I+Y ++ K + D + +F +M ESG PD+L +
Sbjct: 467 LGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNS 526
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
LID+ + G E+ +LF+ +K+ +I P+ Y +L+ L + GKV M + EEM ++
Sbjct: 527 LIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTI 586
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP S+ + ++ AF K R ++ L + + ++ KP++ +Y I + +LG+ R ++
Sbjct: 203 SP-SVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAY 261
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ M+++G PD +++ ++ L RL F +M S KPD +TY L+D
Sbjct: 262 HILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKC 321
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +G+ + + ++N M +I Y +++D L ++G+VD A+ +F+EM
Sbjct: 322 GDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEM 372
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I I+ A +F +K L C PD TYN++LD +G+ RV +ML M
Sbjct: 770 NSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHR 829
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCL-IYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
G +++YNT+++ L K +RL+ + +Y+ M E G P TY L+D ++G +
Sbjct: 830 KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSE-GFSPTPCTYGPLLDGLLKSGKMV 888
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ LFN+M + P+ +Y L++ + G + +FE+M
Sbjct: 889 DAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKM 932
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 14/244 (5%)
Query: 3 NGYIEKL-----CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS--- 52
NGY L K+G A++ + ++ K I +P+ A N VL + A + + ++
Sbjct: 415 NGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGI-VPDVAAANAVLYSLAGSGRLGMAKRV 473
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
F LK + VS T++ YT + + + F ++V+ ++ +N +I
Sbjct: 474 FYELKAMGVSPDTIT---YTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDT 530
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K + +A +F +K +K +P TYN +L LGR G+V +++ M P+
Sbjct: 531 LYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPN 590
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+YNT+L+ L K ++ + M E G PDL +Y ++ + +EE+ R+F
Sbjct: 591 LITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFC 650
Query: 233 DMKQ 236
MK+
Sbjct: 651 QMKK 654
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I L K+G + A+ + +++ + I P+ Y+ ++VA + D+D +L ++
Sbjct: 175 NGLIYFLVKSGFDAEAMEVYKAMVEDGIS-PSVRTYSVLMVAFGKKRDVDTVLWLLNEME 233
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT R + + ++ ++ II + ++
Sbjct: 234 ARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLS 293
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F +K KPD +TY +LD G G ++ + +M G + +SY ++
Sbjct: 294 DAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVV 353
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L ++ R+D L F EM E G+ P+ +Y +LI F + + +L LFN M
Sbjct: 354 DALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPS 413
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y + I+ K G+ A+ +E M S
Sbjct: 414 PNGYTHVLFINYYGKSGQSLKAIQRYEHMKS 444
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 35/204 (17%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN------------------ 142
++I+ ++ A + ++++AL +FD +K P+ +YN
Sbjct: 344 DNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALEL 403
Query: 143 -----------------IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ ++ G+ G+ + + MK G+VPD + N +L +L
Sbjct: 404 FNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAG 463
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
RL + F E+ G+ PD +TYT +I + +E++ F+DM + P +
Sbjct: 464 SGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLA 523
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
SLID L K GK + A +F ++
Sbjct: 524 LNSLIDTLYKGGKGNEAWQLFHKL 547
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/305 (17%), Positives = 128/305 (41%), Gaps = 36/305 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LC+ G V A+ + +++K + +YN ++ + + D + ++ +
Sbjct: 353 VDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGP 412
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + + F + + + + E + + N ++++ A S ++ A
Sbjct: 413 SPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKR 472
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI---------- 174
+F +K + PD ITY +++ + + ++ +N F+ M E+G VPD +
Sbjct: 473 VFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLY 532
Query: 175 -------------------------SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+YNTLL+ L + ++ + EM + P+L+
Sbjct: 533 KGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLI 592
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY ++D + G + ++ + M ++ P + Y +++ L K +++ A +F +M
Sbjct: 593 TYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM 652
Query: 270 NSSLS 274
L+
Sbjct: 653 KKILA 657
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
T++ QL E++V+ I +I + ++ L F + L +PDLI
Sbjct: 922 TENVCQLF---EKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIV 978
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN+++D LG+ R+ + ++ F MK+ G++P+ +YN+L+ +L K + + E+
Sbjct: 979 YNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELL 1038
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
G KP + TY ALI + +G+ + + + M +P+ Y L + L
Sbjct: 1039 RKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R + +D + R+ D L +F Q + N ++ ++
Sbjct: 64 RVVGTDSVVHMLRS--APDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMA 121
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD ++ K ++ T+ + +G G + M+EAG+ + +YN L+ L
Sbjct: 122 QVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFL 181
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + ++ M E GI P + TY+ L+ +FG+ +++ L L N+M+ + ++P++
Sbjct: 182 VKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNV 241
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y Y I L + + D A I +M S
Sbjct: 242 YSYTICIRVLGQAARFDEAYHILGKMEDS 270
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN ++ L + G + + + +M E G+ P +Y+ L+ K R +D L EM
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G+KP++ +YT I G+ +E+ + M+ +P + + +I L G++
Sbjct: 233 EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRL 292
Query: 260 DLAMTIFEEMNSS 272
A +F +M +S
Sbjct: 293 SDAKAVFWKMKAS 305
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 126/305 (41%), Gaps = 46/305 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L + G V ++LL+ + + I+ PN YN VL ++ +++ + +L +
Sbjct: 560 NTLLSGLGREGKVKEVMQLLEEMT-RTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMT 618
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y I + + ++ +I +P+ + I+ +F K+ ++
Sbjct: 619 EKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCT-ILPSFVKNGLMK 677
Query: 121 KAL-LIFDHIKGLKCKPDLITYNIVLD-ILGRVG-------------------------- 152
+AL + ++I C D +++ +++ IL + G
Sbjct: 678 EALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPL 737
Query: 153 -----------RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+ + N+F K GV SYN+L+ L +D+ F EM
Sbjct: 738 IRHLCKHKKALEAHQLFNKF---KGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKR 794
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G PD TY ++D+ G++ +EE L++ +M ++ + Y ++I L K +++
Sbjct: 795 LGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQ 854
Query: 262 AMTIF 266
A+ ++
Sbjct: 855 AIDLY 859
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + + + + F E + + P N +I + +++KA +F+ ++
Sbjct: 205 YNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMR 264
Query: 131 GLKCKPDLITYNIVLDILGRVGRV---NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
G C PD+ITYN +++ RV V +D+L E S + + PD ++Y ++++ K+
Sbjct: 265 GFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKND--LSPDVVTYTSIISGYCKLG 322
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+++ I F M SGIKP+ T+ LI+ FG+ G++ + ++ +M P I +
Sbjct: 323 KMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFT 382
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
SLID + GKV+ ++ ++ E+N+
Sbjct: 383 SLIDGHCRTGKVERSLKLWHELNA 406
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S++V N+++ + Q+++A+ F GL D ++NI++ L R+G+V+ F
Sbjct: 201 SLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELF 260
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE-MGESGIKPDLLTYTALIDSFGR 220
M+ G PD I+YNTL+N ++ +D +E + ++ + PD++TYT++I + +
Sbjct: 261 NEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCK 320
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +E++ LFN+M I+P+ + + LI+ K+G + A ++EEM
Sbjct: 321 LGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEM 369
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 37/266 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ G V A L +R P+ YN ++ N++D +LK+LL S
Sbjct: 244 IRGLCRIGKVDKAFELFNEMRGFGC-SPDVITYNTLINGFCRVNEVDRGHDLLKELL-SK 301
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
LS D ++ II + K ++EKA
Sbjct: 302 NDLSPD---------------------------------VVTYTSIISGYCKLGKMEKAS 328
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++F+++ KP+ T+NI+++ G+VG + N + M G PD I++ +L++
Sbjct: 329 ILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGH 388
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +++ L + E+ + P+ T+ L ++ + + E+ D+K + I
Sbjct: 389 CRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQP 448
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y +ID K G VD A I EM
Sbjct: 449 FMYNPVIDGFCKAGNVDEANVILAEM 474
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ V LL+ L KN P+ Y ++ + ++ + + +++
Sbjct: 276 NTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMI 335
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S ++ + F D EE++ + P II +I ++ ++E
Sbjct: 336 SSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVE 395
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++L ++ + P+ T+ I+ + L + R+++ +K +V YN ++
Sbjct: 396 RSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVI 455
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D + EM E KPD +TYT LI G + E++ +FN M
Sbjct: 456 DGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCA 515
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE 267
P SLI L K G + A I +
Sbjct: 516 PDSITMTSLISCLLKAGMPNEAYRIMQ 542
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFRE-MGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV + YN LLN L + ++D + +FRE MG G D ++ LI R G +++
Sbjct: 197 GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHG-PFDSCSFNILIRGLCRIGKVDK 255
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LFN+M+ P + Y +LI+ ++ +VD + +E+
Sbjct: 256 AFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKEL 298
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 123/243 (50%), Gaps = 4/243 (1%)
Query: 32 LPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLI 89
+P A YN ++ + ++ +L++++ S YT F + L
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH-IKGLKCKPDLITYNIVLDIL 148
E++V ++ + +I K ++++A+ +F IK C P+ +TYN ++
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R+G++++ +N M E G PD ++Y TL+N K+ RLD +M G+ P++
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT-IFE 267
+T+T+L+D R + +++ + +M+++ P++Y Y +++D ++ +++ A + E
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290
Query: 268 EMN 270
EM+
Sbjct: 291 EMD 293
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/267 (17%), Positives = 122/267 (45%), Gaps = 6/267 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK+ A+R+ + L + F P+ Y+C++ + + + + ++ S
Sbjct: 96 ITGFCKSKKSDDALRVFEQLVARG-FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 154
Query: 64 RTLSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + Y + F + + +E + + S ++ ++ F K +++ A
Sbjct: 155 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 214
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + + P+++T+ ++D L R R++D ++ M+ P +YNT+L+
Sbjct: 215 YDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 274
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
++ +L+ + E E P+++++ +I + E++ L + ++++ P
Sbjct: 275 YCRVNQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 332
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +Y ++ID L + KVD A ++ +M
Sbjct: 333 VVMYTTVIDVLCREKKVDEACRVYRKM 359
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%)
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A++++A VP ++YN+L++ L K R EM SG PD+ TYT LI F ++
Sbjct: 43 AAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKS 102
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+++LR+F + + RP + Y LID L K G++ A+ +F M S S
Sbjct: 103 KKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 155
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 100/234 (42%), Gaps = 4/234 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G + A+ L + +PN YN ++ +D + +L+ + +
Sbjct: 131 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 190
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT F + ++ + +++ ++ + ++ A+
Sbjct: 191 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAV 250
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I ++ C P + TYN +LD RV ++ + +F ++E P+ +S+N ++ L
Sbjct: 251 HILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA-RKFM-LEEMDCPPNVVSFNIMIRGL 308
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
K+ R + E PD++ YT +ID R ++E+ R++ M ++
Sbjct: 309 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 35/202 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
II N +I A +++ +E+A+ +FD + C+PDL TYN ++ + GR G F
Sbjct: 328 IITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFN 387
Query: 163 SMKEAGVVPDFISYNTLL------NNLRKIRRL--------------------------- 189
++ G PD +SYN+ L N+ K++ +
Sbjct: 388 DLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQG 447
Query: 190 --DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
DL L +R+M SG PD++TYT LIDS G+T IEE+ + ++M ++P++ Y
Sbjct: 448 QNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYS 507
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+LI K GK A F+ M
Sbjct: 508 ALICGYAKAGKPVEAEETFDCM 529
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 5/182 (2%)
Query: 93 EVVQIASPE---SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
EV A P ++ V N ++ +A+S + K +FD ++ C+PDL+++N +++
Sbjct: 243 EVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARL 302
Query: 150 RVGRV--NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ G + N + ++ +G+ PD I+YNTL++ + L+ + F +M +PD
Sbjct: 303 KAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPD 362
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
L TY A+I +GR G ++ +LFND++ + P Y S + + G V+ I E
Sbjct: 363 LWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICE 422
Query: 268 EM 269
EM
Sbjct: 423 EM 424
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 134/276 (48%), Gaps = 15/276 (5%)
Query: 3 NGYIEKLCKAGNVSA--AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
N I KAG ++ A+ LL +R ++ P+ YN ++ A + ++++ + + D
Sbjct: 295 NTLINARLKAGEMTPNLAIELLTEVR-RSGLRPDIITYNTLISACSRASNLEEAVNVFDD 353
Query: 59 LLVSSRTLSSDCYTNFARAFI-----MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
++ + D +T A + ++ QL +E + P+++ N ++AF
Sbjct: 354 MV--AHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLES--RGFFPDAV-SYNSFLYAF 408
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
A+ +EK I + + + D +TYN ++ + G+ G+ + L + MK +G PD
Sbjct: 409 AREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDV 468
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
I+Y L+++L K +++ EM +G+KP L TY+ALI + + G E+ F+
Sbjct: 469 ITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDC 528
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M + RP Y ++D + + AMT ++EM
Sbjct: 529 MLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEM 564
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL--DLCLIYFRE 198
YN ++ + R G+ N + F M+E G PD +S+NTL+N K + +L + E
Sbjct: 259 YNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTE 318
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ SG++PD++TY LI + R N+EE++ +F+DM P ++ Y ++I + G
Sbjct: 319 VRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGL 378
Query: 259 VDLAMTIFEEMNS 271
A +F ++ S
Sbjct: 379 SGKAEQLFNDLES 391
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
+N ++ A A + + + + ++ + + D +A I+ +L + ++E+
Sbjct: 818 WNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQ 877
Query: 96 QIA---SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
I S SI++ ++ AFA++ I + I+ +K P + Y ++ +L R
Sbjct: 878 DIGFKISKSSILL---MLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGK 934
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+V D+ + M+EAG PD +N++L I ++ + E G++PD TY
Sbjct: 935 QVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYN 994
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LI + R +E L L ++M+ + P + Y+SL+ + K V+ A +FEE+ S+
Sbjct: 995 ILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQST 1054
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 21/269 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAY-----NCVLVASAETNDIDLSF 53
N I +A N+ AV + + + +++ NA C L AE
Sbjct: 332 NTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAE-------- 383
Query: 54 QILKDLLVSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
Q+ DL SR D Y +F AF + ++ EE+V+I + + N +I
Sbjct: 384 QLFNDL--ESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIH 441
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+ K Q + AL ++ +K PD+ITY +++D LG+ ++ + + M GV P
Sbjct: 442 MYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKP 501
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+Y+ L+ K + F M SG +PD L Y+ ++D R + ++ +
Sbjct: 502 TLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFY 561
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+M I P +Y ++ L KV+
Sbjct: 562 KEMIHDGIMPEHSLYELMLRTLGNANKVE 590
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 100/244 (40%), Gaps = 3/244 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC+ V +L + + F P+ +N VL +D + QI + +
Sbjct: 930 LCRGKQVRDVEAMLSEMEEAG-FKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEP 988
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
D Y + + L+ ++E+ + + ++ +F K + +E+A +F
Sbjct: 989 DEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELF 1048
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ ++ CK D Y+I++ I G + F+ MK+ GV P + + L+ +
Sbjct: 1049 EELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSS 1108
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+ + E+ L Y+++ID++ R G+ ++ +K++ + P ++
Sbjct: 1109 GQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIW 1168
Query: 247 RSLI 250
I
Sbjct: 1169 TCFI 1172
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N ++ + K I+ IK +PD TYNI++ + R R + L M
Sbjct: 957 IWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEM 1016
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G+ P +Y +L+ + K + ++ F E+ +G K D Y ++ + +G+
Sbjct: 1017 RTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSH 1076
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
++ RLF+ MK + + P+I L+ + G+ A + + + ++L+
Sbjct: 1077 SKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLS 1129
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 69/151 (45%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I + + + ++ L++ D ++ + +P L TY ++ G+ V F ++
Sbjct: 994 NILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQS 1053
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G D Y+ ++ R F M + G++P + T L+ S+G +G +E
Sbjct: 1054 TGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQE 1113
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+ ++ +++K+ S Y S+ID + G
Sbjct: 1114 AEKVLSNLKETDANLSTLPYSSVIDAYVRNG 1144
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I V +I A+ + + +KA + +++ + +N +++ G F
Sbjct: 779 NISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVF 838
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+M + G P S N LL L RL+ + +E+ + G K + ++D+F R
Sbjct: 839 NTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARA 898
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
GNI E ++++ MK PS+++YR + L + +V + EM +
Sbjct: 899 GNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEA 949
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 129/270 (47%), Gaps = 7/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I+ LCK G + A+ + K N+F YN ++ + D Q+L+D++
Sbjct: 272 IDNLCKDGRLDDALSFFSEMETKGIKANVF---TYNSLIGSFCSFGRWDDGAQLLRDMIT 328
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T + ++ + + T+ E++ + I N +I+ +++++
Sbjct: 329 RKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDE 388
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + D + C PD+ TYNI+++ + +V+D + F M G++ D ++Y+TL+
Sbjct: 389 ANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQ 448
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ R+L + F+EM G+ P ++TY L+D G +EE+L + + M + ++
Sbjct: 449 GFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMEL 508
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I +Y +I + KVD A ++F + S
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPS 538
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 89/167 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+I +N I+ ++ +A+ + + C+P+ TY +L+ + + G L+
Sbjct: 195 LITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLR 254
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+ + P ++Y +++NL K RLD L +F EM GIK ++ TY +LI SF G
Sbjct: 255 KMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFG 314
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +L DM ++I P++ + +LID+L K GK+ A ++ EM
Sbjct: 315 RWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
++NR+ KS AL + ++ K KP ++TY I++D L + GR++D L+ F+ M
Sbjct: 236 ILNRM----CKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G+ + +YN+L+ + R D R+M I P+++T++ALIDS + G +
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
E+ L+N+M + I P+ Y SLI L ++D A + + M S D
Sbjct: 352 TEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCD 402
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 137/273 (50%), Gaps = 15/273 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ ++CK+GN ++A+ LL+ + + I P+ Y ++ + +D + ++ +
Sbjct: 237 LNRMCKSGNTASALDLLRKMEHRKI-KPHVVTYTIIIDNLCKDGRLDDALSFFSEM--ET 293
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + ++ +T +F +F DD QLL +++ +++ + +I + K
Sbjct: 294 KGIKANVFTYNSLIGSFC-SFGRWDDGAQLL---RDMITRKITPNVVTFSALIDSLVKEG 349
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A +++ + +P+ ITYN ++ L R+++ M G PD +YN
Sbjct: 350 KLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYN 409
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N K +++D + FR+M G+ D +TY+ LI F ++ + + ++F +M Q
Sbjct: 410 ILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQ 469
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ P I Y L+D L G+++ A+ I ++M+
Sbjct: 470 GVHPGIMTYAILLDGLCDNGELEEALGILDQMH 502
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 89/169 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ +N +I F + R++ A I L +P+ +T+N +L+ L GRV + +
Sbjct: 125 LYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVD 184
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + VPD I+ NT++N L R+ + M +G +P+ TY +++ ++G
Sbjct: 185 CMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSG 244
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
N +L L M+ ++I+P + Y +IDNL K G++D A++ F EM +
Sbjct: 245 NTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMET 293
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 91/177 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ + + N ++ ++ +A+ + D + + PDLIT N +++ L
Sbjct: 150 KIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKD 209
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
RV++ ++ A M G P+ +Y +LN + K L R+M IKP ++TYT
Sbjct: 210 RVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYT 269
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ID+ + G ++++L F++M+ + I+ +++ Y SLI + G+ D + +M
Sbjct: 270 IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDM 326
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 10/245 (4%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ + +D ++ + + + + Y+ + F + +E+
Sbjct: 407 TYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEM 466
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V I+ ++ + ++E+AL I D + K + D+ YNI++ + +V
Sbjct: 467 VSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKV 526
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+D + F S+ GV D SYN +L+ L K L FR+M E G +PD TY L
Sbjct: 527 DDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTL 586
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
I + R +I S++L +MK+ + ++D L G++D S L+
Sbjct: 587 IRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSS-GELD---------KSFLN 636
Query: 275 DLAGP 279
L+GP
Sbjct: 637 MLSGP 641
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 8/252 (3%)
Query: 22 LQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFI 79
+Q R K P+A YN ++ A A + I+ D+L ++ S Y N A
Sbjct: 179 MQEWRCK----PDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACG 234
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
+ + L +++++ ++ N ++ AF Q KA F+ +KG PD
Sbjct: 235 AAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTF 294
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGV--VPDFISYNTLLNNLRKIRRLDLCLIYFR 197
T NIV+ L +VG+ D ++ SM+E V PD ++Y +++++ +++ C F
Sbjct: 295 TLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFD 354
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M G+KP++++Y AL+ ++ G E+ +F +KQ +RP + Y +L++ +
Sbjct: 355 MMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSA 414
Query: 258 KVDLAMTIFEEM 269
+ + A +F EM
Sbjct: 415 QPEKAREVFNEM 426
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 7/253 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLS-----FQILK 57
N + AGN A+ L + + +N P+ +V SA N + F+++K
Sbjct: 227 NNVVNACGAAGNWKKALELCKKM-IRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMK 285
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ T + + + D LL + E SP+ ++ II ++
Sbjct: 286 GANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPD-VVTYTSIIHSYYVCG 344
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
Q+E +FD + KP++++YN +L G + F +K+ G+ PD +SY
Sbjct: 345 QVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYT 404
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TLLN + + + F EM ++ KP+ ++Y ALID++G G +E++ L ++M++
Sbjct: 405 TLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKD 464
Query: 238 QIRPSIYVYRSLI 250
I P + +L+
Sbjct: 465 GIPPDVVSISTLL 477
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 125/305 (40%), Gaps = 38/305 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
I L K G AV LL S+R+K + P+ Y ++ + ++ + ++
Sbjct: 300 IHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAE 359
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ Y A+ T+ + + Q ++ ++ A+ +S Q EKA
Sbjct: 360 GVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKA 419
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN- 181
+F+ ++ CKP+ ++YN ++D G G + ++ M++ G+ PD +S +TLL
Sbjct: 420 REVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAA 479
Query: 182 --------------NLRKIRRLDLCLIYFRE--------------------MGESGIKPD 207
K R ++L ++ + M S + PD
Sbjct: 480 CGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPD 539
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+TY LI + G ESL+ F DM +I + VY SLI + K K+ A + F
Sbjct: 540 AVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFI 599
Query: 268 EMNSS 272
M +S
Sbjct: 600 NMKAS 604
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I+ N I ++ EKAL ++ + PD +TYNI++ L ++G+ + L F
Sbjct: 504 NIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFF 563
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + + Y++L+ + K +L F M SG PD+LTYTA+I ++
Sbjct: 564 EDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDH 623
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G+ LF +M+ I P + SL++ L K + + + + M+
Sbjct: 624 GSWTSVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMH 672
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
A+ Q+++A +F ++ +CKPD YN +++ R G +N M A + P
Sbjct: 164 ARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSR 223
Query: 174 ISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+YN ++N N +K L+LC ++M +G+ PDL+T+ ++ +F ++
Sbjct: 224 ATYNNVVNACGAAGNWKKA--LELC----KKMIRNGVGPDLVTHNIVLSAFKNGFQYTKA 277
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F MK I P + +I L K+G+ A+ + M
Sbjct: 278 TGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSM 319
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 2/192 (1%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ + + E+ + P ++ ++ ++ A + RQ K + + K + +++ YN +
Sbjct: 453 EAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGI 512
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
G L +A+M + V PD ++YN L++ L K+ + L +F +M + I
Sbjct: 513 GSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIP 572
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
Y++LI S+ + + E+ F +MK P + Y ++I G +
Sbjct: 573 LTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDL 632
Query: 266 FEEM--NSSLSD 275
F+EM N+ L D
Sbjct: 633 FKEMEGNAILPD 644
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 103/243 (42%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN + + D + + ++ ++ S+ + Y + L F E++
Sbjct: 507 AYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDM 566
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V + P + V + +I ++ K ++ +A F ++K C PD++TY ++ G
Sbjct: 567 VDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSW 626
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + F M+ ++PD I ++L+ L K + L + M + I+ + Y +
Sbjct: 627 TSVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEI 686
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
I S + + + + + S+ L++ L K GK + M +F +M SS S
Sbjct: 687 IASCSMLRDWKTASEIIEHLDSSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKMVSSCS 746
Query: 275 DLA 277
+
Sbjct: 747 TVG 749
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 128/272 (47%), Gaps = 8/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CKAG + L + + + PN N ++ T + + +
Sbjct: 423 NCLIDGFCKAGEIEKGKELFDEMNKEGV-APNVVTVNTLVGGMCRTGRVSSAVNFFVE-- 479
Query: 61 VSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R + D YT AF ++ + + E+++ IV +I F+++ +
Sbjct: 480 AQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGR 539
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A + +K L +PD + YN ++ R + + + M+EAG+ PD I+YNT
Sbjct: 540 MADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNT 599
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK-QQ 237
L+ K L R+M ++G+ P + TY A+I+++ GN E++ +F DMK
Sbjct: 600 LIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAAS 659
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ P+ +Y LI++L K KV A+++ E+M
Sbjct: 660 KVPPNTVIYNILINSLCKNNKVKSAVSLMEDM 691
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 2/272 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G + L++ +R + P+ YNC++ + +I+ ++ ++
Sbjct: 387 NTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMN 446
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T + + F E + + +I AF E
Sbjct: 447 KEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFE 506
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ +F+ + C PD I Y ++ + GR+ D A +K+ G+ PD + YNTL+
Sbjct: 507 KAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 566
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + +EM E+G+KPD +TY LI + G+++ + ++ M + +
Sbjct: 567 GGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVV 626
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y ++I+ G + AM IF++M ++
Sbjct: 627 PTVATYGAVINAYCLNGNGNEAMEIFKDMKAA 658
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 26/264 (9%)
Query: 28 KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFAR-----AFIMTD 82
KN +L N + +L+ S D + +++ ++ S+ S+C N A +F++
Sbjct: 188 KNTYLRNVWLSILLRSGRVKD---ALKVIDEMFESND--DSNCRPNDATGDILFSFLLKR 242
Query: 83 DCTQLLIFIEEVVQIA---SPESIIV----VNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
+ + L+ +E+V + +++ + R+I ++R+ + +F + L
Sbjct: 243 ERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAV 302
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
+ N +L L R G N M M E + P+ +++ L+N++ K RR+D L
Sbjct: 303 LESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEV 362
Query: 196 FREMG---ESG-----IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVY 246
+M ESG ++PD++ Y LID + G +E L L M+ Q+ P Y
Sbjct: 363 LEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITY 422
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMN 270
LID K G+++ +F+EMN
Sbjct: 423 NCLIDGFCKAGEIEKGKELFDEMN 446
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 4/223 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I +AG ++ A +L L+ I P+ YN ++ TN F++LK++ +
Sbjct: 531 ISGFSQAGRMADASFVLAELKKLGI-RPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG 589
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y D + ++++ ++ +I A+ + +A+
Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAM 649
Query: 124 LIFDHIKGL-KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
IF +K K P+ + YNI+++ L + +V ++ MK GV P+ +YN +
Sbjct: 650 EIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKG 709
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
LR + L+ + M E PD +T L + G IE
Sbjct: 710 LRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/295 (17%), Positives = 109/295 (36%), Gaps = 37/295 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + +C+ G VS+AV + + + Y ++ A N+ + + ++ ++L
Sbjct: 458 NTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLK 517
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S + + Y F + E+ ++ + N +I F ++ + +
Sbjct: 518 SGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHR 577
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV--------------------------- 154
+ ++ KPD ITYN ++ + G +
Sbjct: 578 VFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVIN 637
Query: 155 --------NDMLNEFASMKEAG-VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
N+ + F MK A V P+ + YN L+N+L K ++ + +M G+
Sbjct: 638 AYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVT 697
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
P+ TY A+ ++E+ + M + P L + L +G+++
Sbjct: 698 PNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I + G VS A L + + + +P+ Y+ + A + +D + +L+ ++
Sbjct: 231 NTVIHGFFREGEVSKACNLFHEMMQQGV-VPDVVTYSSYIDALCKARAMDKAELVLRQMI 289
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + + E+ + I N + + K + +
Sbjct: 290 SNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSK 349
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A FD + KPDL+TY+++L G V DMLN F SM+ G+V D YN L+
Sbjct: 350 EAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILI 409
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D ++ F +M E G+ PD TY +I +F R G + +++ FN M ++
Sbjct: 410 DAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLK 469
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P VY SLI G + A + EM S
Sbjct: 470 PDTIVYNSLIQGFCMHGNLVKAKELISEMMS 500
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 132/268 (49%), Gaps = 8/268 (2%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
YI+ LCKA + A +L+ + N F P+ YNC++ + + + +++ +
Sbjct: 268 YIDALCKARAMDKAELVLRQMI-SNGFEPDKVTYNCMIHGYSILGQWKETAGMFREM--T 324
Query: 63 SRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R L D +T ++ + + F + + ++ + ++ +A +
Sbjct: 325 RRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVV 384
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
L +F+ ++G D YNI++D G+ G +++ + F M+E GV+PD +Y T++
Sbjct: 385 DMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI- 239
++ RL + F +M G+KPD + Y +LI F GN+ ++ L ++M + I
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIP 504
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
RP+ + S+I++L K G+V A IF+
Sbjct: 505 RPNTVFFNSIINSLCKEGRVVEAQDIFD 532
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 4/266 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC A AV +L + P+ +Y+ VL + E + + +L ++ S
Sbjct: 164 LCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGC 223
Query: 67 SSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S + Y F + ++ E++Q ++ + I A K+R ++KA L
Sbjct: 224 SPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAEL 283
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + +PD +TYN ++ +G+ + F M G++PD + N+ +++L
Sbjct: 284 VLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLC 343
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + +F M G KPDL+TY+ L+ + G + + L LFN M+ I
Sbjct: 344 KHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHS 403
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
VY LID K G +D AM IF +M
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQ 429
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 125/269 (46%), Gaps = 4/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K G + A+ + ++++ + +P+A Y V+ A + + + ++
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGV-MPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKA 122
+ Y + + F M + + I E++ P + + N II + K ++ +A
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
IFD + + +PD+IT+N ++D G VG++ +M G+ PD ++Y+ LL+
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ R+D LI FREM G+KP +TY ++ G + ++ ++M +
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I ++ L + D A+ +F+++ +
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIALFKKLGA 676
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGVVPDFISYNTLLNNL----RKIRRL 189
K D+I NI+L L R +D +N M E GV PD ISY+T+L +L R R L
Sbjct: 151 KTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRAL 210
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
DL ++ G G P++++Y +I F R G + ++ LF++M QQ + P + Y S
Sbjct: 211 DLLHTMVKKSG--GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSY 268
Query: 250 IDNLKKMGKVDLAMTIFEEMNSS 272
ID L K +D A + +M S+
Sbjct: 269 IDALCKARAMDKAELVLRQMISN 291
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 47/310 (15%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA-SAETNDID---LSFQI 55
CN Y+ LCK G A S+ K P+ Y+ +L +AE +D L +
Sbjct: 335 CNSYMSSLCKHGKSKEAAEFFDSMAAKG-HKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM 393
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+ +V+ ++ + + + +M + +LIF + + P++ +I AF++
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDE---AMLIFTQMQERGVMPDAW-TYGTVIAAFSR 449
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFAS--------- 163
++ A+ F+ + + KPD I YN ++ + G + + ++++E S
Sbjct: 450 MGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTV 509
Query: 164 ---------MKEAGVV---------------PDFISYNTLLNNLRKIRRLDLCLIYFREM 199
KE VV PD I++N+L++ + +++ M
Sbjct: 510 FFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM 569
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
GI+PD++TY+AL+D + R G I++ L LF +M + ++P+ Y ++ L G+
Sbjct: 570 ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRT 629
Query: 260 DLAMTIFEEM 269
A + EM
Sbjct: 630 VGAKKMCHEM 639
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 116/273 (42%), Gaps = 4/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ C GN+ A L+ + + I PN +N ++ + + + + Q + DL+
Sbjct: 476 NSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRV-VEAQDIFDLV 534
Query: 61 VS-SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + + + + + ++ ++ + ++ + ++ + ++ +I
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRI 594
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ L++F + KP ITY I+L L GR M E+G D + +
Sbjct: 595 DDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGII 654
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L L + D + F+++G +K ++ +ID+ + EE+ LF+ + +
Sbjct: 655 LGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGL 714
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ Y +I NL K G V+ A +F M S
Sbjct: 715 VPNASTYGVMITNLLKEGSVEEADNMFSLMEKS 747
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I ++N +I A K R+ E+A +FD I P+ TY +++ L + G V + N F
Sbjct: 682 NIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMF 741
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+++G P N ++ L + + Y ++ I + T + ++ F R
Sbjct: 742 SLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRK 801
Query: 222 GNIEESLRLFNDMKQ 236
G E ++ M Q
Sbjct: 802 GKYREQIKSLPAMYQ 816
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 8/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I L V AV L + L +NI PN Y V+ + +F +L+ + S
Sbjct: 149 IRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS 208
Query: 64 RTLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT AF M D T LL E+ Q + P I + +I A K Q E
Sbjct: 209 TKPNTRTYTIVIDAFCKDGMLDGATSLL---NEMKQKSIPPDIFTYSTLIDALCKLSQWE 265
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+F + L P++ T+N V+D L + G+V D M E GV PD I+YN ++
Sbjct: 266 NVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMII 325
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ ++D F M I+PD+++Y LI+ + R I+E++++ ++ Q+ ++
Sbjct: 326 DGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLK 385
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
PSI L+ L ++G+ A F+EM S+
Sbjct: 386 PSIVTCNVLLHGLFELGRTKSAQNFFDEMLSA 417
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 38/298 (12%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G+ A LL+ L ++ PN Y V+ A + +D + +L ++ S
Sbjct: 188 LCKKGHTQKAFDLLR-LMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPP 246
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
Y+ A + E++ + ++ N +I K ++E A I
Sbjct: 247 DIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
++ PD+ITYN+++D G G+V+ F SM + PD ISYN L+N +
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQ 366
Query: 187 RRLDLCLIYFREMGESGIK-----------------------------------PDLLTY 211
+++D + RE+ + G+K PDL T+
Sbjct: 367 KKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTH 426
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+ + + G +EE++ F+ +++++ +I +Y ++ID L K GK+D A FE++
Sbjct: 427 CTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKL 484
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 120/277 (43%), Gaps = 40/277 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G V A +++ + +K + P+ YN ++ +D + +I ++
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMRYMIEKGV-DPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++++ D II N +I +A+ ++I+
Sbjct: 346 --NKSIEPD---------------------------------IISYNILINGYARQKKID 370
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + I KP ++T N++L L +GR N F M AG +PD ++ TLL
Sbjct: 371 EAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLL 430
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K ++ + +F ++ ++ YTA+ID + G ++++ F + +
Sbjct: 431 GGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLH 490
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
P + Y ++I + G +D A + +M N L+D
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLAD 527
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 109/195 (55%), Gaps = 6/195 (3%)
Query: 75 ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKC 134
AR F D ++LL E++V+ +++ NR+I + + +++AL +F+ ++ + C
Sbjct: 390 ARRF---DSISKLL---EQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGC 443
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+PD +TY ++DI + G ++ ++ + M+EAG+ PD +Y+ ++N L K L
Sbjct: 444 EPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHW 503
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F EM E G P+L+TY +I + N E +L+L++DM+ +P Y +++ L
Sbjct: 504 LFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALG 563
Query: 255 KMGKVDLAMTIFEEM 269
G ++ A ++F EM
Sbjct: 564 HCGYLEEAESVFVEM 578
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 86/160 (53%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
++R+ + + + + C+P+++TYN ++ G + + LN F M+E G PD
Sbjct: 387 LGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPD 446
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++Y TL++ K +D+ + ++ M E+G+ PD TY+ +I+ G+ GN+ + LF
Sbjct: 447 RVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFC 506
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M + P++ Y +I K ++A+ ++ +M ++
Sbjct: 507 EMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNA 546
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 66/130 (50%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TY ++ ILGR R + + M + G P+ ++YN L++ L L F EM
Sbjct: 379 TYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEM 438
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
E G +PD +TY LID + G I+ ++ ++ M++ + P + Y +I+ L K G +
Sbjct: 439 QEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNL 498
Query: 260 DLAMTIFEEM 269
A +F EM
Sbjct: 499 AAAHWLFCEM 508
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 82/158 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+V+ +++ N +I AK+R E AL ++ ++ +PD +TY+IV++ LG G
Sbjct: 507 EMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCG 566
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ + + F M++ VPD Y L++ K ++ +++ M +G+ P++ T
Sbjct: 567 YLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCN 626
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+L+ +F R + ++ L M +RPS+ Y L+
Sbjct: 627 SLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLL 664
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 75/161 (46%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + C P+L+TYNI++ + + L + M+ AG
Sbjct: 488 IINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAG 547
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM + PD Y L+D +G+ GN+E++
Sbjct: 548 FQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKAS 607
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + P++ SL+ ++ ++ A + + M
Sbjct: 608 EWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSM 648
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 60/108 (55%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ L + RR D +M + G +P+++TY LI +G +
Sbjct: 369 RQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYL 428
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+L +FN+M++ P Y +LID K G +D+AM++++ M +
Sbjct: 429 KEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEA 476
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N +I +LCK + A +L L + + +PNA YN ++ D+D +F +++
Sbjct: 291 NSFISRLCKERRIEEASGVLCKLLESGL-VPNAVTYNALIDGCCNKGDLDKAFAYRDEMM 349
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y A + + I+E+ + ++ N I + + +
Sbjct: 350 NRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAK 409
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL +FD + +P + TY ++D+ G+ R+++ +F + G++PD I +N L+
Sbjct: 410 KALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALI 469
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +D +EM + + PD +T+ L+ + R +EE+ +L ++MK++ I+
Sbjct: 470 DGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIK 529
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +LI K G + A+ +F+EM
Sbjct: 530 PDHISYNTLISGYSKRGDMKDALEVFDEM 558
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 19/274 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC+ G A + + + PN YN V+ + + +I K + + L
Sbjct: 227 LCREGKWKKAKDFIGHMEVYGV-KPNVVTYNTVINGYCLRGKFEAASKIFKTM--KDKNL 283
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF-----AFAKSRQIEK 121
DCYT +FI + C + I V ES +V N + + ++K
Sbjct: 284 KPDCYT--YNSFI-SRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDK 340
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A D + + TYN+++ L R+ DM+ E M+E GV PD ++YN
Sbjct: 341 AFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE---MREKGVEPDVVTYNI 397
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+N + L F EM E I+P + TYT+LID FG+ + E+ F ++
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I ++ +LID G +D A + +EM+++
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA 491
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
II+ N +I + I++A + + K PD +T+N ++ R +V +
Sbjct: 462 IIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLD 521
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
MKE G+ PD ISYNTL++ K + L F EM G P LLTY ALI + + G
Sbjct: 522 EMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIG 581
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+ + L +M+ + I P Y +I+ +K
Sbjct: 582 EADHAEELLREMQSKGITPDDSTYLYVIEAMK 613
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 94/178 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
EE+V++ SI+ N +I + + +KA H++ KP+++TYN V++
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G+ F +MK+ + PD +YN+ ++ L K RR++ ++ ESG+ P+ +TY
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ALID G+++++ ++M + I S++ Y LI L +++ A + +EM
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQ------- 54
NGY C+ GN A+ L + +KNI Y ++ + N + + +
Sbjct: 400 NGY----CRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIK 455
Query: 55 --ILKDLLVSSRTLSSDCYT-NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+L D+++ + + C N RAF + + + +EV N ++
Sbjct: 456 EGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVT----------FNTLMQ 505
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+ + R++E+A + D +K KPD I+YN ++ + G + D L F M G P
Sbjct: 506 GYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDP 565
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
++YN L+ KI D REM GI PD TY +I++ ++ E+
Sbjct: 566 TLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVEN 621
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ A +++ + + K ++T+NI+++IL R G+ + M+ GV P+ ++YNT
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++N + + F+ M + +KPD TY + I + IEE+ + + +
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P+ Y +LID G +D A +EM
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEM 348
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI-FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LC G V+ A+ L + I F +Y ++ + D + ++++ +
Sbjct: 136 IKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLT 195
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + Y A ++ E+ ++ +I+ F + ++++A+
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIG 255
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + + P++ TYNI++D L + G+V + N A M +A V PD I+Y+TL++
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ L F M G+ PD+ +YT LI+ F + ++E+L LF +M Q+ + P I
Sbjct: 316 LVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLID L K G++ + +EM
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLIDEM 400
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 141/303 (46%), Gaps = 42/303 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CK G+ A++L++ + D + PN YN ++ A + + ++ + ++ ++
Sbjct: 171 INGVCKIGDTRGAIKLVRKI-DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEM--TA 227
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE- 120
+ +S+D YT F + + + + E+V ++ N ++ A K +++
Sbjct: 228 KGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287
Query: 121 ----------------------------------KALLIFDHIKGLKCKPDLITYNIVLD 146
KA +F+ + + PD+ +Y I+++
Sbjct: 288 AKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILIN 347
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ V++ LN F M + +VP ++Y++L++ L K R+ EM + GI
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPA 407
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+++TY +LID + G+++ ++ LFN MK Q IRP + + L+D L K G++ A F
Sbjct: 408 NVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAF 467
Query: 267 EEM 269
+++
Sbjct: 468 QDL 470
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 90/161 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K++ +++AL +F + P ++TY+ ++D L + GR++ + + M++ G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ + I+YN+L++ L K LD + F +M + GI+P T+T L+D + G ++++
Sbjct: 405 IPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQ 464
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F D+ + +Y Y +I+ K G ++ A+T+ +M
Sbjct: 465 EAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKM 505
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 89/169 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
II N+I+ +FAK + A+ + ++ +PDLIT NI+++ +G++ + A
Sbjct: 59 IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ + G P I++ TL+ L +++ L + ++ GIK D ++Y LI+ + G
Sbjct: 119 KILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIG 178
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +++L + + +P++ +Y ++ID L K V A +F EM +
Sbjct: 179 DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTA 227
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 111/270 (41%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K + S AV L L K I P+ N ++ I F +L +L
Sbjct: 63 NKILDSFAKIKHYSTAVSLSHRLELKGI-QPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +T + + + L F ++++ + +I K
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR 181
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + I G KP++ YN ++D L + V++ F+ M G+ D ++Y TL+
Sbjct: 182 GAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI 241
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+L + EM I P++ TY L+D+ + G ++E+ + M + ++
Sbjct: 242 YGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVK 301
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P + Y +L+D + ++ A +F M+
Sbjct: 302 PDVITYSTLMDGYFLVYELKKAQHVFNAMS 331
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V A +L + K P+ Y+ ++ ++ + + + +
Sbjct: 276 VDALCKEGKVKEAKNVLAVML-KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG 334
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T YT F + L +E+ Q I+ + +I KS +I
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D ++ ++ITYN ++D L + G ++ + F MK+ G+ P ++ LL+ L
Sbjct: 395 DLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGL 454
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL F+++ G D+ Y +I+ + G +EE+L + + M++ P+
Sbjct: 455 CKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNA 514
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +I+ L K + D A + +M
Sbjct: 515 VTFDIIINALFKKDENDKAEKLLRQM 540
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 77/158 (48%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ ++ A+ F+ + ++ P +I +N +LD ++ + ++ ++ G+ PD I+
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L+N + ++ ++ + G +P +T+T LI G + ++L + +
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
Q I+ Y +LI+ + K+G A+ + +++ L+
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLT 195
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%)
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ V+D +++F M P I +N +L++ KI+ + + GI+PDL+T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ F G I + + ++ +P + +LI L G+V+ A+ +++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 128/272 (47%), Gaps = 38/272 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G + AV++L + ++ PNA YN ++ + + N +D + +I + L
Sbjct: 347 NSLISGLCKLGEIEEAVKILDQMVSRDCS-PNAVTYNAIISSLCKENRVDEATEIAR--L 403
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++S+ I+ D CT N +I S +
Sbjct: 404 LTSKG-------------ILPDVCT--------------------FNSLIQGLCLSSNHK 430
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ +F+ +KG C+PD TYN+++D L ++ + LN M+ G + + YNTL+
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +R++ F EM G+ D +TY LID ++ +E++ +L + M + +R
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y SL+ + K G + A I + M SS
Sbjct: 551 PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSS 582
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 31/306 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + A+ +Q + F P+ YN ++ + + +++ +L
Sbjct: 277 NVLINGFCKQGRIDQALSFIQEAVSEG-FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML 335
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQI--------ASPESIIVVNRIIFA 112
+ L D YT + +++ C L IEE V+I SP ++ N II +
Sbjct: 336 LGG--LDPDIYTYNS---LISGLCK--LGEIEEAVKILDQMVSRDCSPNAV-TYNAIISS 387
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K ++++A I + PD+ T+N ++ L ++ F MK G PD
Sbjct: 388 LCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPD 447
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+YN L+++L R+L+ L +EM +G +++ Y LID F + IEE+ +F+
Sbjct: 448 EFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFD 507
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM------------NSSLSDLAGPK 280
+M+ Q + Y +LID L K +V+ A + ++M NS L+
Sbjct: 508 EMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTG 567
Query: 281 DFKRKA 286
D K+ A
Sbjct: 568 DIKKAA 573
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 110/238 (46%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
+ +N ++ A + + + + +++++ + +T + +I + L E+
Sbjct: 204 STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQ 263
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+V+ P + + VN +I F K +I++AL +PD TYN +++ L ++G
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ +M G+ PD +YN+L++ L K+ ++ + +M P+ +TY A
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNA 383
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+I S + ++E+ + + + I P + + SLI L AM +FEEM
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG 441
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 10/276 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC + N +A+ L + ++ K P+ YN ++ + + ++ + +LK++
Sbjct: 417 NSLIQGLCLSSNHKSAMDLFEEMKGKGC-RPDEFTYNMLIDSLCSSRKLEEALNLLKEME 475
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ + Y F + IF E +Q S +S+ N +I KS+++
Sbjct: 476 LNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSV-TYNTLIDGLCKSKRV 534
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E A + D + +PD TYN +L + G + + +M +G PD ++Y TL
Sbjct: 535 EDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATL 594
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K R+ + R + G+ Y +I + + E++RLF +M +
Sbjct: 595 ISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSE 654
Query: 240 RPSI----YVYRSLIDNLKKMGK-VDLAMTIFEEMN 270
P VYR L + +G+ VD + + E N
Sbjct: 655 PPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGN 690
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 121/271 (44%), Gaps = 11/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
IE L + + AA+R+ + F+P++ Y +L + + ++L+++ +S
Sbjct: 68 IETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSG 127
Query: 64 RTLSSDCYTNFARA---FIMTDDCTQLLIFIEEVVQIASPESII--VVNRIIFAFAKSRQ 118
+ F + F + D+ ++ +E+ +I P++ V+ ++ K +
Sbjct: 128 CEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRI-KPDTRFYNVLLNVLVDANKLKL 186
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E A + + + D+ T+NI++ L + +V + M G+ PD ++ T
Sbjct: 187 VESA---HSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTT 243
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ + LD L +M E G +T LI+ F + G I+++L + +
Sbjct: 244 IMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG 303
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RP + Y +L++ L K+G AM + + M
Sbjct: 304 FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G V A+ LL ++++ + PN YN ++ ++ +++ + +++++L
Sbjct: 219 NTMLDSYCKEGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEML 277
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S +S+ Y F + +EE+V + ++ N +++ K Q+
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 337
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
L F + K PD++++N +L R G +++ F +K +VP I+YNTL+
Sbjct: 338 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 397
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L LD L +EM + G+ PD+ TYT L++ + G + + FN+M + ++
Sbjct: 398 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 457
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y + I K+ +A ++ EEM
Sbjct: 458 PDRFAYNTRIVGEMKIADTSVAFSMQEEM 486
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 38/290 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN---------------------------- 34
N I LC G + AA+RL + + D+ +F P+
Sbjct: 394 NTLIHGLCMWGYLDAALRLKKEMTDQGLF-PDIFTYTILVNGCFKLGYVSMARGFFNEML 452
Query: 35 ---------AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCT 85
AYN +V + D ++F + +++L + Y F A +
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFE 512
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ +E +V + II F K+ + KA +F+ + P ++TY +++
Sbjct: 513 EACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLI 572
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
++ F+ M E V + I+YN ++N L RR+D YF EM E GI
Sbjct: 573 HAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGIL 632
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
P+ +YT LI+ G EE+LRL+ +M ++I+P + + + NL +
Sbjct: 633 PNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHR 682
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
NRI+ + KA ++ ++ KP ++TYN +LD + GRV+ L + M+E
Sbjct: 184 NRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQE 243
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G P+ ++YN L+N L K L+ EM SG+ TY LI+ F + G E
Sbjct: 244 RGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVE 303
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L +M ++ P++ Y +L+ L K +V F +M
Sbjct: 304 AFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%)
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
LL+FD + PD+ N +L +L ++ N + M++ G+ P ++YNT+L++
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K R+D L EM E G P+ +TY L++ + G +E++ L +M + S
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y LI+ + G A + EEM
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEM 311
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M G++PD + N +L LR L + M + GIKP ++TY ++DS+ +
Sbjct: 168 FDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCK 227
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM-NSSLS 274
G ++++L L ++M+++ P+ Y L++ L K G+++ A + EEM NS L+
Sbjct: 228 EGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN 282
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ +P ++ N +I K ++ +A +F +K + C PD++TYN ++D G+ G +
Sbjct: 193 HLPAP-NVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELE 251
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ + M+++G D ++YN L+N K ++ YF EM G+ +++T + +
Sbjct: 252 EVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFV 311
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D+F + G + E+++LF M+ + + P+ + Y SL+D K G++D A+ + +EM
Sbjct: 312 DAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ V Q+ P + N I+ A++RQ +F+H+ P++ T+NIV+D L +
Sbjct: 156 LARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCK 211
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + + F MK G PD ++YN+L++ K L+ + EM +SG D++T
Sbjct: 212 QGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVT 271
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ALI+ F + G IE++ F +MK+ + ++ + +D K G V AM +F +M
Sbjct: 272 YNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQM 330
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F+ SP+ ++ N +I + K ++E+ L+ ++ C D++TYN +++
Sbjct: 221 LFVRMKAMGCSPD-VVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCF 279
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G + + F MK GV+ + ++ +T ++ K + + F +M G+ P+
Sbjct: 280 SKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNE 339
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
TYT+L+D + G +++++ L ++M Q + P++ Y ++D L K GKV +A
Sbjct: 340 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVA 393
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 129/304 (42%), Gaps = 38/304 (12%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN + +L + RL + L N+F N L E + F +K +
Sbjct: 171 CNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGC 230
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S ++ Y + + + ++ + + E+ + ++ N +I F+K IEK
Sbjct: 231 SPDVVT---YNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEK 287
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A F +K L +++T + +D + G V + + FA M+ G++P+ +Y +L++
Sbjct: 288 AYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVD 347
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG------------------- 222
K RLD ++ EM G+ P+++TYT ++D + G
Sbjct: 348 GTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKA 407
Query: 223 ----------------NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
N E +L L N+MK + + + +Y +LI L K+ K+D A ++
Sbjct: 408 NELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLL 467
Query: 267 EEMN 270
+M+
Sbjct: 468 HKMD 471
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 125/266 (46%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CKAG + A+ LL + + + +PN Y ++ + + ++ +L + +
Sbjct: 346 VDGTCKAGRLDDAIVLLDEMVHQGL-VPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAG 404
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT M + + L + E+ + + +I+ K +++++A
Sbjct: 405 VKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAK 464
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + +P+ + Y ++D + G+ ++ + + ++G+ P+ ++Y L++ L
Sbjct: 465 SLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGL 524
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + +F +M E G+ P++ YT LID F + G++ +++ L N+M + +
Sbjct: 525 CKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDK 584
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLID K G + A + +M
Sbjct: 585 VVYTSLIDGHMKQGDLQGAFALKAKM 610
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P ++I I+ AF K+ + +A+ + I +P+++TY ++D L + G + + ++
Sbjct: 477 PNTVIYTT-IMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAIS 535
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M+E G+ P+ Y TL++ KI L + EM + G+ D + YT+LID
Sbjct: 536 HFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHM 595
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G+++ + L M + ++ +Y Y I M + A + EM
Sbjct: 596 KQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 645
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 117/262 (44%), Gaps = 1/262 (0%)
Query: 14 NVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT 72
N A+ LL +++K + L + Y ++ + +D + +L + ++ YT
Sbjct: 424 NSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYT 483
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
AF ++ + + ++ +++ +I K+ I +A+ FD ++ L
Sbjct: 484 TIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMREL 543
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
P++ Y ++D ++G ++ ++ M + G+ D + Y +L++ K L
Sbjct: 544 GLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGA 603
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+M E+G++ DL YT I F ++E+ + ++M I P Y LI
Sbjct: 604 FALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRK 663
Query: 253 LKKMGKVDLAMTIFEEMNSSLS 274
+K+G ++ A ++ EM S LS
Sbjct: 664 YQKLGNMEEASSLQNEMESVLS 685
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 97/180 (53%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
EV Q +I N +I A ++S +E A+ +F+ + +C+PDL TYN ++ + GR G
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCG 342
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ + F + E G +PD I+YN+LL K +D ++ ++G K + +TY
Sbjct: 343 KAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYN 402
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+I +G+ G ++ ++ L+++M+ P Y +ID+L KM ++ A + E+M +
Sbjct: 403 TMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDA 462
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 38/270 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + + G A RL + L +K F+P+A YN +L A A+ ++D
Sbjct: 332 NAMVSVHGRCGKAEEAERLFRELVEKG-FMPDAITYNSLLYAFAKEGNVD---------- 380
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ C E++V+ ++ I N +I + K +++
Sbjct: 381 ----KVEHTC---------------------EQLVKAGFKKNEITYNTMIHMYGKMGRLD 415
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ ++D ++ + C PD +TY +++D LG++ R+ + M +AG+ P I+++ L+
Sbjct: 416 LAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALI 475
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K R F M SG+KPD L Y ++D F R+G+ E+ L L+ M R
Sbjct: 476 CAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYR 535
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P +Y+ L+ L K K + + ++M
Sbjct: 536 PDDDMYQVLLVALAKEDKCEEIEEVIQDME 565
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%)
Query: 21 LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIM 80
L++ LR + +N ++ A AE+ + + + +++ + + D RA I+
Sbjct: 768 LVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIV 827
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
+L + +EE+ + S V ++ AFAK+ + + + I++ +K P++
Sbjct: 828 DGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHL 887
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
Y ++ +L R D+ A M+ AG PD N LLN D +R +
Sbjct: 888 YRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSIL 947
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
E+G++PD TY LI + R+ EE L N+M ++ + P + Y+SL+ K +
Sbjct: 948 EAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELRE 1007
Query: 261 LAMTIFEEMNS 271
A IFEEM S
Sbjct: 1008 QADQIFEEMRS 1018
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 129/271 (47%), Gaps = 5/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRL--LQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
N I K+G ++A V L L +R + P+ YN ++ A +++++++ + + +D
Sbjct: 260 NTLINARSKSGCLAAGVALDLLFEVRQSGL-RPDVITYNTLISACSQSSNLEDAVTVFED 318
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ S Y + E+V+ I N +++AFAK
Sbjct: 319 MIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGN 378
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++K + + K + ITYN ++ + G++GR++ + + M+ G PD ++Y
Sbjct: 379 VDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTV 438
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++++L K+ R+ +M ++G+KP L+ ++ALI ++ + G ++ F+ M
Sbjct: 439 MIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASG 498
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P Y ++D + G + + ++ +M
Sbjct: 499 VKPDRLAYLVMLDVFARSGDTEKMLCLYRKM 529
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 5/180 (2%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E + + ++P S V ++ ++RQ A +F G + +N ++ + R
Sbjct: 178 EWLARSSAPASRAVAV-VLGVLGRARQDSIAEEVFLRFAGEGAT--VQVFNAMMGVYARS 234
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL--DLCLIYFREMGESGIKPDLL 209
GR +D +M + G+ PD +S+NTL+N K L + L E+ +SG++PD++
Sbjct: 235 GRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVI 294
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY LI + ++ N+E+++ +F DM + RP ++ Y +++ + GK + A +F E+
Sbjct: 295 TYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFREL 354
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
ASP+ + V R + +AL F+ + P +VL +LGR + D
Sbjct: 153 ASPDEVAFVVRAV----GESSWRRALDAFEWL-ARSSAPASRAVAVVLGVLGRARQ--DS 205
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ E ++ AG +N ++ + R D M + GI PDL+++ LI++
Sbjct: 206 IAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINA 265
Query: 218 FGRTGNIEE--SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++G + +L L +++Q +RP + Y +LI + ++ A+T+FE+M +S
Sbjct: 266 RSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIAS 322
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 76/216 (35%), Gaps = 35/216 (16%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ I E+ + ++N ++ + + ++ ++ I +PD TYN ++ +
Sbjct: 906 LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMY 965
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM--------- 199
R R + M + G+ P SY +LL K + F EM
Sbjct: 966 CRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNR 1025
Query: 200 --------------------------GESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
E GI+P + T L+ S+G G E+ + N+
Sbjct: 1026 SIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNN 1085
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+K + S Y ++ D K G + T EM
Sbjct: 1086 LKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEM 1121
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 14/274 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CKA + A RLL + + I NA YN ++ + +D + LV R
Sbjct: 40 INGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA-------LVHYR 92
Query: 65 TLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ C YT A + + + +E++++ +++ N +I F K
Sbjct: 93 DMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 152
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A+++F+ + C PD+ TYNI++D + R D M + G P+FI+YNT
Sbjct: 153 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 212
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+++L K + + M KP T+ +ID F + G ++ + LF M +
Sbjct: 213 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 272
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P IY Y +I + ++D A + E M +
Sbjct: 273 CLPDIYTYNIMISGACRANRIDDARQLLERMTEA 306
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 37 NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ 96
NC+L A ++ + K+ L + S Y+ F D Q ++E+ +
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
V N II + +++ AL+ + ++ C P +ITY I++D L + R++D
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISD 120
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
M EAG P+ ++YNTL+N K+ +D ++ F +M E+ PD+ TY LID
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ + ++ +L +M + P+ Y +L+D+L K GK
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 222
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N +I ++ +I+ A + + + C PD++TYN ++ L + +V++ +
Sbjct: 277 IYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE 336
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++ G D ++ +TL++ L K RRLD REM +G PD++ YT LI F +
Sbjct: 337 VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD 396
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+++SL F++M + P++ Y +ID L K +V
Sbjct: 397 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 433
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ CK G + A L Q + D+ LP+ Y ++ I+
Sbjct: 246 NLMIDMFCKVGQLDLAYELFQLMTDRGC-LPDIY---------------TYNIM------ 283
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+S C N DD QLL E + + P ++ N I+ K+ Q+++A
Sbjct: 284 ---ISGACRAN------RIDDARQLL---ERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+++ ++ D++T + ++D L + R++D M+ G PD ++Y L++
Sbjct: 332 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 391
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
K +LD L +F EM + G P ++TY+ +ID ++ + + L M ++ +
Sbjct: 392 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 125/253 (49%), Gaps = 9/253 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ KAG++ + + +R++ + PN Y V+ + D+ + ++ SS
Sbjct: 140 IDAWGKAGDLRRMWQAWEDMREQGL-RPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSS 198
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR-----IIFAFAKSRQ 118
T + A + + Q++ +E +V+ + + ++ ++ A++++ +
Sbjct: 199 GDGVEPNRTTY-NAMVHSYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGR 257
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++KAL FD I +P L + +L +LG GR ++ML MK GV P YNT
Sbjct: 258 VDKALEAFDSIAATGGQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNT 317
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++N K R + + F+ M G+ D+ TY LID++ +TG E+ + + MK++
Sbjct: 318 IINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREG 377
Query: 239 IRPSIYVYRSLID 251
++P++Y SL+D
Sbjct: 378 LQPTMYTIASLMD 390
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR--DKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLV 61
I L K G+V+A R ++ + PN YN ++ + + +D + L + +
Sbjct: 175 IATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMD-KMEALVERMR 233
Query: 62 SSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ L D +T+ A A+ + L + + S+ I+ + +
Sbjct: 234 ADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHMLGTAGRS 293
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++ L D +K L KP YN +++ G+ ++ M++ F +M+ GV D +YNTL
Sbjct: 294 DEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTL 353
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K + ++ M G++P + T +L+D++ R E+ LRL + MK++
Sbjct: 354 IDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGR 413
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIF 266
P V+ LID +MGK + A +
Sbjct: 414 APDNVVFNLLIDTYGRMGKPEEAEKVL 440
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
R+M E G++P + TYT LID++G+ G++ + + DM++Q +RP++ VY S+I L K+
Sbjct: 122 RDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIATLGKL 181
Query: 257 GKVDLAMTIFEEMNSSLSDLAGP 279
G V F EM S D P
Sbjct: 182 GDVAAMERTFAEMQRSSGDGVEP 204
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 39/200 (19%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA- 167
+I A+ K+ + + ++ ++ +P+++ Y V+ LG++G V M FA M+ +
Sbjct: 139 LIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSS 198
Query: 168 --GVVPDFISYNTLLNN-------------LRKIR-----------------------RL 189
GV P+ +YN ++++ + ++R R+
Sbjct: 199 GDGVEPNRTTYNAMVHSYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRV 258
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
D L F + +G +P L +TA++ G G +E LR + MK+ ++PS VY ++
Sbjct: 259 DKALEAFDSIAATGGQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTI 318
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I+ K + M F+ M
Sbjct: 319 INAFGKARNIHSMMDTFKAM 338
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + V + ++ + ++ ++ + ++ + +P + TY I++D G+ G + M
Sbjct: 95 PVPLAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQ 154
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES---GIKPDLLTYTALID 216
+ M+E G+ P+ + Y +++ L K+ + F EM S G++P+ TY A++
Sbjct: 155 AWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVH 214
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSI----YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
S+G+ +++ L M+ P + + + +++ + G+VD A+ F+ + ++
Sbjct: 215 SYGQQQMMDKMEALVERMRAD---PGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAAT 271
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 122 ALLIFDHIKGLKCKP------DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
A ++DH++ L ++++L GR G + M+E GV P +
Sbjct: 76 ATQLYDHLRAETTTTQAAAPVPLAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMST 135
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y L++ K L + +M E G++P+++ YT++I + G+ G++ R F +M+
Sbjct: 136 YTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQ 195
Query: 236 QQQ---IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + P+ Y +++ + + +D + E M +
Sbjct: 196 RSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEALVERMRA 234
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 130/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CKAG + A+ + + KN+ P+ Y ++ A D D + ++
Sbjct: 262 IKGYCKAGKLQKAMEKFRDMEMKNV-KPDKITYMTLIQACYSERDFDTCLSLYLEMEERG 320
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ C + E + Q ++ + +I +++K+ +E+A+
Sbjct: 321 LEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAM 380
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K +PD +TY+++++ L + GR++D + F + GV + + Y +L++ L
Sbjct: 381 RLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGL 440
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R++ F EM E G D Y A+ID+ + G I+++L LF M+++ ++
Sbjct: 441 GKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTV 500
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y + LID L K K + A+ +++M
Sbjct: 501 YTFTILIDGLFKEHKNEEAIKFWDKM 526
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 50 DLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRI 109
D+ + +K ++ TL CY+ R F D C L + +EE P S +V
Sbjct: 280 DMEMKNVKPDKITYMTLIQACYSE--RDF---DTCLSLYLEMEERGLEIPPHSYSLV--- 331
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
I K R+ +A +F+ + C+ ++ Y ++D + G + + + F MK G
Sbjct: 332 IGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGF 391
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
PD ++Y+ L+N L K RLD + F G+ + + Y +LID G+ G IE++
Sbjct: 392 EPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAEN 451
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
LF +M ++ Y Y ++ID L K GK+D A+ +F M D
Sbjct: 452 LFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCD 497
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 49/241 (20%)
Query: 76 RAFIMTDDCTQLLI-------FIEEVVQIAS-------PESIIVVNRIIFAFAKSRQIEK 121
R +MT+ LI +EE++ + S+ N ++ S IE
Sbjct: 179 RGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIES 238
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F+ + G K PD +TYNI++ + G++ + +F M+ V PD I+Y TL+
Sbjct: 239 AEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQ 298
Query: 182 NLRKIRRLDLCLIYFREMGESGI-----------------------------------KP 206
R D CL + EM E G+ +
Sbjct: 299 ACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRA 358
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
++ YTALIDS+ + G++EE++RLF MK + P Y L++ L K G++D M +F
Sbjct: 359 NVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 418
Query: 267 E 267
+
Sbjct: 419 D 419
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 104 IVVNRIIFA-----FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+ +N + +A K+ +IE A +F+ + C D YN ++D L + G+++ L
Sbjct: 426 VAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQAL 485
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M+E G ++ L++ L K + + + ++ +M + GI P + ++ AL
Sbjct: 486 ALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 545
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G + + ++ +D+ I P + +I+ L K ++ A
Sbjct: 546 CLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEA 588
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 97/235 (41%), Gaps = 16/235 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-----AETNDIDLSFQILKDLL 60
+ LCK+G + + L R+K + A N + AS + I+ + + +++
Sbjct: 402 VNGLCKSGRLDDGMELFDFCRNKGV----AINAMFYASLIDGLGKAGRIEDAENLFEEMS 457
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S CY A Q L + + +++ +I K + E
Sbjct: 458 EKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNE 517
Query: 121 KALLIFDHIKGLKCKPDLITYN---IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+A+ +D + P + ++ I L + G+V R +L++ A M G++P+ ++
Sbjct: 518 EAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPM---GIIPE-TAFE 573
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++N L K +R+ + + G + T LI++ + GN + ++L +
Sbjct: 574 DMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMH 628
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 5/263 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G A++LL+ + D++ PN Y+ ++ + ++ ++ + ++
Sbjct: 125 LCKTGETRCAIKLLRMIEDRST-RPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFP 183
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ Y AF + + E++ + + +I A K + K IF
Sbjct: 184 NVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQ--IF 241
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ + P++ +YNI+++ L + RV++ +N M +VPD ++YN+L++ L K
Sbjct: 242 HAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 301
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+ L EM G D++TYT+L+D+ + N++++ LF MK++ I+P++Y Y
Sbjct: 302 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 361
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+LID L K G++ A +F+ +
Sbjct: 362 TALIDGLCKGGRLKNAQELFQHL 384
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 5/271 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M + I+ LCK V+ A L + + IF PN YN ++ A + +F +L +
Sbjct: 152 MYSAIIDGLCKDKLVNEAYDLYSEMDAREIF-PNVITYNTLICAFCLAGQLMGAFSLLHE 210
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+++ + ++ D YT + + +VQ+ ++ N +I K ++
Sbjct: 211 MIL--KNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 268
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A+ + + PD +TYN ++D L + GR+ LN M G D ++Y +
Sbjct: 269 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 328
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K + LD F +M E GI+P + TYTALID + G ++ + LF + +
Sbjct: 329 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y +I L K G D A+ I +M
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKM 419
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 107/218 (49%), Gaps = 2/218 (0%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
SF +L +L ++ +T + + + +LL F ++VV A + + ++
Sbjct: 64 SFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLN 123
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
K+ + A+ + I+ +P+++ Y+ ++D L + VN+ + ++ M + P
Sbjct: 124 GLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFP 183
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ I+YNTL+ +L EM I PD+ T++ LID+ + G + + ++F
Sbjct: 184 NVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIF 241
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M Q + P++Y Y +I+ L K +VD AM + EM
Sbjct: 242 HAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM 279
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 7/270 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA---ETNDIDLSFQILKDL 59
N I C AG + A LL + KNI P+ Y ++ A E + F + +
Sbjct: 189 NTLICAFCLAGQLMGAFSLLHEMILKNIN-PDVYTFSILIDALCKEGKNAKQIFHAMVQM 247
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V+ S + N D+ LL E++ + N +I KS +I
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLL---REMLHKNMVPDTVTYNSLIDGLCKSGRI 304
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
AL + + + D++TY +LD L + ++ F MKE G+ P +Y L
Sbjct: 305 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 364
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K RL F+ + G D+ TYT +I + G +E+L + + M+
Sbjct: 365 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 424
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ + +I +L + + D A + EM
Sbjct: 425 IPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 81/169 (47%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++++ ++ +I F Q+ + + I L P+ IT+ ++ L G V +L+
Sbjct: 43 QNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHF 102
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ + +SY TLLN L K + R + + +P+++ Y+A+ID +
Sbjct: 103 HDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCK 162
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E+ L+++M ++I P++ Y +LI G++ A ++ EM
Sbjct: 163 DKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEM 211
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+V+ SP II N+I+ + K + + + + + +L+T +I+++ +G+
Sbjct: 3 LVRHTSP--IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQ 60
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ + + + G P+ I++ TL+ L + L + ++ + + ++Y
Sbjct: 61 MAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGT 120
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L++ +TG +++L ++ + RP++ +Y ++ID L K V+ A ++ EM++
Sbjct: 121 LLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDA 178
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 95/170 (55%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+II ++ K+ ++E+A + D + C+P+ I Y+ ++D + G++ + F
Sbjct: 608 NIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF 667
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E G P+ +Y++L+N+L K +RLDL L +M E+ P+++ YT +ID +
Sbjct: 668 VKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKV 727
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G EE+ RL M++ P++ Y ++ID K+GK++ + ++ +M S
Sbjct: 728 GKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCS 777
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 135/319 (42%), Gaps = 50/319 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR---------------DKNIFLPN--AYNCVLVASAETND 48
I+ CKAG + A ++ ++ D + PN Y ++ + N
Sbjct: 565 IDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANR 624
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
++ + ++L + V+ + Y F T ++ + ++ +
Sbjct: 625 VEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSS 684
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + K ++++ L + + C P+++ Y ++D L +VG+ + M+E G
Sbjct: 685 LINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVG 744
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ I+Y +++ KI +++ CL +R+M G P+ +TY LI+ TG ++E+
Sbjct: 745 CYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAH 804
Query: 229 RLFNDMKQ---------------------------------QQIRPSIYVYRSLIDNLKK 255
RL ++MKQ + P +YR LIDN K
Sbjct: 805 RLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIK 864
Query: 256 MGKVDLAMTIFEEMNSSLS 274
G+++ A+ + EE++SS S
Sbjct: 865 AGRLEGALNLLEEISSSPS 883
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 131/293 (44%), Gaps = 23/293 (7%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSL----RDKNIFLPNAYNCVLVASAE---TNDIDLSF 53
M N + CK+ + S A +L + + L N + + ++ E ++ ++L+
Sbjct: 344 MFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAE 403
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
+ ++L L+ +NFAR + I E++ +++I
Sbjct: 404 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFL 463
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ ++EKA L+F+ +K P + TY I++D + G + N F M P+
Sbjct: 464 CDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNV 523
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF-- 231
++Y +L++ K R++ F M G KP+++TYTALID + G I+++ +++
Sbjct: 524 VTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYAR 583
Query: 232 --NDMKQQQI------------RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
D++ I P+I Y +L+D L K +V+ A + + M+
Sbjct: 584 MQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMS 636
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 132/306 (43%), Gaps = 48/306 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA V A LL ++ N PN Y+ ++ +T ++ + ++ + +S
Sbjct: 616 VDGLCKANRVEEAHELLDTM-SVNGCEPNQIVYDALIDGFCKTGKLENAQEVF--VKMSE 672
Query: 64 RTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R + YT + + +L + ++++ + ++++ +I K + E+
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEE 732
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + ++ + C P++ITY ++D G++G++ L + M G P+FI+Y L+N
Sbjct: 733 AYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLIN 792
Query: 182 NLRKIRRLDLCLIYFREMGES--------------GIKPDLLT----------------- 210
+ LD EM ++ G + +T
Sbjct: 793 HCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVE 852
Query: 211 --YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI-----YVYRSLIDNLKKMGKVDLAM 263
Y LID+F + G +E +L L ++ PS+ Y+Y SLI++L KVD A
Sbjct: 853 SLYRILIDNFIKAGRLEGALNLLEEISSS---PSLAVANKYLYTSLIESLSHASKVDKAF 909
Query: 264 TIFEEM 269
++ M
Sbjct: 910 ELYASM 915
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 104 IVVNRI-IFAFAK----SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+V+N++ + FA+ + + +KA I + PD TY+ V+ L +V
Sbjct: 414 VVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAF 473
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F MK+ G+VP +Y L+++ K + +F EM P+++TYT+LI ++
Sbjct: 474 LLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAY 533
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ + ++ +LF M + +P++ Y +LID K G++D A I+ M +
Sbjct: 534 LKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDI 588
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 124/312 (39%), Gaps = 51/312 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I+K C+ G + A+ L L+D P YN ++ + +D +F + +++
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S + FA + C L +E+ + P+++ NR++ ++ ++
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFV--PDTVFY-NRMVSGLCEASLFQE 290
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A+ I D ++ + C P+++TY I+L G++GR +L + M G P+ +N+
Sbjct: 291 AMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRIL---SMMMTEGCYPNREMFNS 347
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS--------------------- 217
L++ K R F++M + G +P L Y I S
Sbjct: 348 LVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYS 407
Query: 218 ----------------FGR----TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
F R G +++ + +M + P Y +I L
Sbjct: 408 EMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDAS 467
Query: 258 KVDLAMTIFEEM 269
KV+ A +FEEM
Sbjct: 468 KVEKAFLLFEEM 479
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 21/242 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G A RL+ + + + PN Y ++ + I+ ++ +D+
Sbjct: 721 IDGLCKVGKTEEAYRLMLKMEEVGCY-PNVITYTAMIDGFGKIGKIEQCLELYRDMC--- 776
Query: 64 RTLSSDCYTNFARAFIMTDDC--TQLL----IFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S C NF ++ + C T LL ++E+ Q P I +II F +R
Sbjct: 777 ---SKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NR 831
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN---EFASMKEAGVVPDFI 174
+ ++ + D + + P Y I++D + GR+ LN E +S V ++
Sbjct: 832 EFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYL 891
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
Y +L+ +L ++D + M + P+L T+ LI R G +E+L+L + +
Sbjct: 892 -YTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950
Query: 235 KQ 236
Q
Sbjct: 951 CQ 952
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 137/350 (39%), Gaps = 86/350 (24%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVL-------------------- 40
N ++ LCKAG V A+ L++LR F+ Y+C++
Sbjct: 285 NAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVL 344
Query: 41 ----------------VASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDC 84
AE + +F ++ T + CY +A D
Sbjct: 345 EQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDL 404
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
+ E+V+ I +I K + +++A+ +FD + + C P ++TYN++
Sbjct: 405 DGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVL 464
Query: 145 LDILGRVGRVNDMLNEFASMK--------------------------------------- 165
+D L R R+ + F M+
Sbjct: 465 IDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLK 524
Query: 166 ---------EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
++GVVPD ++YNTLLN L K+R LD L FRE+ G D +TY LID
Sbjct: 525 AYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLID 584
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
S R ++L LF D+ PS+ +Y S++ +L +M K+ A+ ++
Sbjct: 585 SLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLW 634
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKG-LKCKPDLITYNIVLDIL-GRVGRVNDMLNEFASMKE 166
+IFA A + + +A+ F ++G C+P YN VL +L G V L + M
Sbjct: 145 LIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVA 204
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
AG +P+ +YN L++ L K L F EM GI P++ T+T L+ S G ++E
Sbjct: 205 AGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKE 264
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFK 283
+ L + M+ + P Y + + L K G+VD A+ E + + + + G K +
Sbjct: 265 AENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYS 321
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
PD++ Y I++ GR ND F MKE G PD YNTLL L LD
Sbjct: 350 SPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARS 409
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
EM + + D+ TYT +I + ++E++++F+ M + PS+ Y LID L
Sbjct: 410 LMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLY 469
Query: 255 KMGKVDLAMTIFEEM 269
+ +++ A +F +M
Sbjct: 470 RAHRLEEARMLFYKM 484
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 37/200 (18%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I K AL +FD + P++ T+ I+L + G++ + N SM++
Sbjct: 215 NVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMED 274
Query: 167 AGVVPDFISYNTLLNNLRKIRRLD----------------------LCLI---------- 194
G PD ++YN L+ L K R+D CLI
Sbjct: 275 KGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYE 334
Query: 195 -----YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
Y + ++ + PD++ YT +I G ++ F++MK++ P + Y +L
Sbjct: 335 EGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTL 394
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+ L G +D A ++ EM
Sbjct: 395 LKALCDAGDLDGARSLMSEM 414
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 53/283 (18%)
Query: 31 FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQ---- 86
F+ NA VLVAS + L+ +R +++ C N A ++ +
Sbjct: 176 FVYNAVLRVLVASGGAVPLALALY--------NRMVAAGCLPNRATYNVLIHGLCKRGTP 227
Query: 87 ---LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI 143
L +F E + + +P ++ ++ + + Q+++A + ++ C PD +TYN
Sbjct: 228 VDALKLFDEMISRGITP-NVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNA 286
Query: 144 VLDILGRVGRVNDMLNEFASMKEAG----------------------------------- 168
L L + GRV++ + +++ G
Sbjct: 287 FLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQ 346
Query: 169 --VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
V PD + Y ++ + R + +F EM E G PD Y L+ + G+++
Sbjct: 347 ADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDG 406
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L ++M + + I+ Y ++I L K VD AM +F+ M
Sbjct: 407 ARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGM 449
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 113/250 (45%), Gaps = 24/250 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N ++ LC AG++ A L+ + N+ L + Y +++ + +D + Q+ ++
Sbjct: 392 NTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVE 451
Query: 62 SSRTLSSDCYT----NFARAFIMTDDCTQLLIFIEEVV--------------QIASPESI 103
S Y RA + + ++L + EV Q+ E++
Sbjct: 452 VGCHPSVMTYNVLIDGLYRAHRLEE--ARMLFYKMEVGNNPSLFLRLTLGANQVRDSETL 509
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+++ + +S Q+ KA + I PD++TYN +L+ L +V ++ L F
Sbjct: 510 ---QKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRE 566
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ G D I+Y TL+++L + R + L F+++ SG P + Y +++ S R
Sbjct: 567 LQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQK 626
Query: 224 IEESLRLFND 233
+ +++ L+ D
Sbjct: 627 LSQAINLWFD 636
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 126/268 (47%), Gaps = 6/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK + AV L++++ ++ P YN ++ +D + ++ ++
Sbjct: 116 VDGLCKCERLDEAVALVETMAERGC-APTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG 174
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT F + D + L + EV + I+ + +I K+ ++ A+
Sbjct: 175 CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + C P ITYN ++ R G +++ + M + PD ++Y TL++
Sbjct: 235 DIFEE---MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K+ RLD F++M + + PD++T+T+L+D G +E++L L ++ ++ P+I
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y Y ++D K +V A + + S
Sbjct: 352 YTYNCVVDGYCKANQVRKAEELVADFRS 379
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD-------------------- 137
A P + +++ +K+R++ A+ + + + PD
Sbjct: 34 AHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDA 93
Query: 138 ---------------LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
ITY+ ++D L + R+++ + +M E G P ++YN+++
Sbjct: 94 RELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITG 153
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ RR+D + +M G PD++TYTALI F ++ ++ L L ++ ++ P
Sbjct: 154 FCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPD 213
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I Y ++ID L K G++ A+ IFEEM+ +
Sbjct: 214 IVTYSTVIDGLCKAGRLRDAVDIFEEMSCA 243
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 127/299 (42%), Gaps = 32/299 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC+AG + A+ + + + D + Y ++ ++ + + Q+L++++ +
Sbjct: 9 NVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSA 68
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ T ++ + D +EE++ + I + ++ K ++++A
Sbjct: 69 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 128
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + + + C P ++TYN ++ R RV++ M G PD I+Y L+
Sbjct: 129 VALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGG 188
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALID-------------------------- 216
K R + L E+ G PD++TY+ +ID
Sbjct: 189 FCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT 248
Query: 217 ------SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ R G+++E++RL M + P + Y +L+ KMG++D A +F++M
Sbjct: 249 YNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 121/271 (44%), Gaps = 14/271 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK+ +V + LL + + F P+ Y+ V+ + + + I +++ +
Sbjct: 186 IGGFCKSRDVGRGLELLGEVTRRG-FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAP 244
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + + D + + + ++V ++ ++ AF K +++ A
Sbjct: 245 TAIT---YNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + K PD++T+ ++D L GR+ D L + G P +YN +++
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 361
Query: 184 RK---IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ--Q 238
K +R+ + + FR G P+ +TY L+ R G +++L+ + + +
Sbjct: 362 CKANQVRKAEELVADFR---SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGP 418
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S+ +Y ++D L + G+ D A+ +EEM
Sbjct: 419 CPTSVAMYAIILDALCRDGRTDDAVQFYEEM 449
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 110/276 (39%), Gaps = 46/276 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+AG++ A+RLL + D P+ Y ++ A + +D ++++ + ++
Sbjct: 250 NSLIGGYCRAGDMDEAIRLLGKMVDDKC-APDVVTYTTLMSAFCKMGRLDDAYELFQQMV 308
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + +T+ L +EE+ + P +I N ++ + K+ Q+
Sbjct: 309 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVR 368
Query: 121 KA-----------------------------------LLIFDHI--KGLKCKPDLITYNI 143
KA L D + +G C + Y I
Sbjct: 369 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 428
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+LD L R GR +D + + M + G VP ++ T++ L K + EM + G
Sbjct: 429 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 488
Query: 204 IKPDLLTYTALIDSFGRTGNIEES------LRLFND 233
P T A++ ++ R G I+++ LRL+ D
Sbjct: 489 HTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTD 524
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P + +N+V+ L R GR+ L + M +A PDF++Y L++ L K RRL +
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+EM + PD T T ++ S ++++ L +M + + + Y +L+D L K
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 256 MGKVDLAMTIFEEM 269
++D A+ + E M
Sbjct: 122 CERLDEAVALVETM 135
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK A+ LL +R K P+ YN ++ A D+D + IL +L
Sbjct: 293 LDATCKESGYRQAMALLDEMRAKGCE-PDIVTYNVLINAMCNEGDVDEALNILSNLPSHG 351
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT ++ ++ ++ + E+ + N I+ + + +++A+
Sbjct: 352 CKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI 411
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ DH+ C D++TY+ +LD L VGRV+D + + +K G PD I+Y T+L L
Sbjct: 412 EVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 471
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ + EM S PD +T+ ++ S + G ++ ++R+ M + P I
Sbjct: 472 CSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDI 531
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +ID L +D AM + ++ S
Sbjct: 532 VTYNCIIDGLCNESCIDDAMELLSDLQS 559
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN I++LC G VS A R+ +L + YN ++ I+ + +++ +
Sbjct: 190 CNILIKRLCSDGRVSDAERVFAALGPSATVV--TYNTMVNGYCRAGRIEDARRLINGMPF 247
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T + + RA + L ++++ S++ + ++ A K +
Sbjct: 248 PPDTFT---FNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQ 304
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + D ++ C+PD++TYN++++ + G V++ LN +++ G PD ++Y +L
Sbjct: 305 AMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLK 364
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L R EM + PD +T+ ++ S + G ++ ++ + + M +
Sbjct: 365 SLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA 424
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y S++D L +G+VD A+ + + S
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKS 454
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 119/275 (43%), Gaps = 1/275 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC+ G V A+ ++ + + Y+ +L + +D + ++L L
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS 454
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT + T+ + + E++ P + N ++ + + +++
Sbjct: 455 YGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDR 514
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + + C PD++TYN ++D L ++D + + ++ G PD +++NTLL
Sbjct: 515 AIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLK 574
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R + M S PD LT+ +I S + G + +++ M + P
Sbjct: 575 GLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVP 634
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ Y ++D L K GK A+ + M + DL
Sbjct: 635 NSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDL 669
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 10/271 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKD 58
M NGY C+AG + A RL+ + F P+ + N ++ A I + + D
Sbjct: 225 MVNGY----CRAGRIEDARRLINGMP----FPPDTFTFNPLIRALCVRGRIPDALAVFDD 276
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L + S Y+ A Q + ++E+ I+ N +I A
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++AL I ++ CKPD +TY VL L R ++ A M PD +++NT
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ +L + +D + M E G D++TY++++D G +++++ L + +K
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P Y +++ L + + A + EM
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEM 487
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 5/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+ G V A+R+++ + + N P+ YNC++ + ID + ++L DL
Sbjct: 500 NTVVASLCQKGLVDRAIRVVEQMSE-NGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ 558
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + D + +++ P + N +I + + +
Sbjct: 559 SCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLT 618
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + C P+ TY+IV+D L + G+ L + M PD I+YNT++
Sbjct: 619 QAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVI 676
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+NL K +++ L R M +G+ PD TY +L R + ++R+ ++ +
Sbjct: 677 SNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLS 736
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y ++ + + DLA+ F M SS
Sbjct: 737 PDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSS 768
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 10/167 (5%)
Query: 108 RIIFAFAKSRQIEKALLIFDHIK---GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
R + + + +I++AL++FD + G C P ++ NI++ L GRV+D FA++
Sbjct: 155 RRLRSLVQRGEIDEALVLFDSMASGGGRNCPP-VVPCNILIKRLCSDGRVSDAERVFAAL 213
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ V ++YNT++N + R++ R + PD T+ LI + G I
Sbjct: 214 GPSATV---VTYNTMVNGYCRAGRIE---DARRLINGMPFPPDTFTFNPLIRALCVRGRI 267
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++L +F+DM + PS+ Y L+D K AM + +EM +
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRA 314
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
++ L KAG AA+ LL + + L YN V+ + ++ + +L+ ++ +
Sbjct: 643 VDALLKAGKAQAALELLSGMTNGTPDL-ITYNTVISNLTKAGKMEEALDLLRVMVSNGLC 701
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y + A D + + + V N ++ F + R+ + A+
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDC 761
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
F H+ C PD TY I+L+ L G +++ AS+ GV+
Sbjct: 762 FAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 8/252 (3%)
Query: 22 LQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFI 79
+Q R K P+A YN ++ A A + I+ D+L ++ S Y N A
Sbjct: 181 MQEWRCK----PDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACG 236
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
+ + L +++ + ++ N ++ AF Q KA+ F+ +KG PD
Sbjct: 237 AAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTF 296
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
T NIV+ L + G+ + + SM+E PD ++Y +++++ +++ C F
Sbjct: 297 TLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFD 356
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M G+KP++++Y AL+ ++ G ++L +F +KQ +RP + Y +L++ + G
Sbjct: 357 MMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSG 416
Query: 258 KVDLAMTIFEEM 269
+ + A F+EM
Sbjct: 417 QPEKAREAFKEM 428
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 15/266 (5%)
Query: 16 SAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC----- 70
S A+ + ++ NI P+ + +V D I +LL S R + C
Sbjct: 277 SKAIAYFEMMKGANI-APDTFTLNIVIHCLVKDGQYGEAI--ELLNSMREKRTQCPPDVV 333
Query: 71 -YTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
YT+ ++ + +DC +F V + P +I+ N ++ A+A AL IF
Sbjct: 334 TYTSIMHSYYVCGKVEDCKA--VFDMMVAEGVKP-NIVSYNALLGAYASRGMHADALGIF 390
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+K +PD+++Y +L+ GR G+ F M++ P+ +SYN L++
Sbjct: 391 KLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSA 450
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+ EM + GI PD+++ + L+ + GR I + + K + I+ +I Y
Sbjct: 451 GMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCY 510
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNSS 272
S I + G A+ ++ M +S
Sbjct: 511 NSGIGSYLNFGDYGKALELYAVMMAS 536
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I+ N I ++ KAL ++ + PD +TYNI++ L +VG+ + L F
Sbjct: 506 NIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFF 565
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + + Y++L+ + K +L F M ESG PD+LTYTA+I+++
Sbjct: 566 EDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDD 625
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ + LF +M+ ++P + SL++ L + + + + + E M
Sbjct: 626 GSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELM 673
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ + + E+ + P ++ ++ ++ A + RQI K I + K K +++ YN +
Sbjct: 455 EAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGI 514
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
G L +A M + V PD ++YN L++ L K+ + L +F +M + I
Sbjct: 515 GSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIP 574
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
Y++LI S+ + G + E+ F+ MK+ P + Y ++I+ G A +
Sbjct: 575 LTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDL 634
Query: 266 FEEMNSS 272
F+EM +
Sbjct: 635 FKEMEGN 641
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A+ QI++A +F ++ +CKPD YN ++ R G+ +N M A
Sbjct: 161 MIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAA 220
Query: 169 VVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ P +YN ++N N +K L+LC ++M +G+ PDL+T+ ++ +F
Sbjct: 221 IPPSRTTYNNVINACGAAGNWKKA--LELC----KKMTRNGVGPDLVTHNIVLSAFKNGS 274
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ F MK I P + +I L K G+ A+ + M
Sbjct: 275 QYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSM 321
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L F E++V + P + V + +I ++ K ++ +A F +K C PD++TY +++
Sbjct: 562 LKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEA 621
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
G + + F M+ V PD I ++L+ L + + + L M E I +
Sbjct: 622 YNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLN 681
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
Y +I S + + + + + S+ L+ L K GK + M +F
Sbjct: 682 QKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFY 741
Query: 268 EMNSSLSDLA 277
+M SS S +
Sbjct: 742 KMMSSCSTVG 751
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 117/280 (41%), Gaps = 27/280 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYN---CVLVASAETNDIDLSFQILKDLLV 61
I LCK G + +++ + + D I L Y+ C V + + + +F +K+
Sbjct: 549 ISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGC 608
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQ---LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
L+ YT A+ DD + +F E P++II + ++ A + Q
Sbjct: 609 LPDVLT---YTAMIEAY--NDDGSWRNAWDLFKEMEGNTVQPDAIIC-SSLMEALNRGSQ 662
Query: 119 IEKALLIFDHIKGLKCKP-------DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
E+ L + + +K KC P ++I +L + + L+ S G +
Sbjct: 663 HERVLQLMELMKE-KCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTL- 720
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
N LL L K + + + F +M S + TYT L+ + G + + +
Sbjct: 721 -----NHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVL 775
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M+ + P++Y+Y++++ + + +D + E++NS
Sbjct: 776 QWMEDAGVSPTLYMYQNVLPYIWRDNSMDYVTLMQEKINS 815
>gi|302815817|ref|XP_002989589.1| hypothetical protein SELMODRAFT_21981 [Selaginella moellendorffii]
gi|300142767|gb|EFJ09465.1| hypothetical protein SELMODRAFT_21981 [Selaginella moellendorffii]
Length = 368
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 14/280 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK GN AV LL +++ + P+A ++C++ +T+ D + +LK + +
Sbjct: 75 INGFCKLGNFKNAVVLLGRMKEAG-YAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAG 133
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + +D L +E + P + ++ +R++ K+ ++E A
Sbjct: 134 CEPDEVTYFSIVDPLCNMEDWESALRVLELAQERKCPATNLLYSRLMKCLCKTGKVEAAC 193
Query: 124 LIFDHIK-----------GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+ + + G CKPD++ Y+IV+D L +G ++ +M+E GV PD
Sbjct: 194 QLLEDLTNGSRGSEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPD 253
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+ Y L + RLD M E+G PD+++Y L+ + G EE+ RLF
Sbjct: 254 AVVYTIFLYAFCRSARLDDACRLLEIMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQ 313
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M + I P+++ Y LI L K++ A +F M S
Sbjct: 314 VMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLS 353
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P I N +I +K +E+A + ++ CKPD Y V++ ++G + +
Sbjct: 30 PADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGNFKNAVV 89
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
MKEAG PD + ++ ++ L K + D L+ + E+G +PD +TY +++D
Sbjct: 90 LLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFSIVDPLC 149
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ E +LR+ ++++ + +Y L+ L K GKV+ A + E++ +
Sbjct: 150 NMEDWESALRVLELAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNG 202
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 125/316 (39%), Gaps = 51/316 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN---AYNCVLVASAETNDIDLSFQILKDL 59
N IE LCK + A+RL + +R N+ P YN ++ ++ ++ + ++LK +
Sbjct: 2 NCLIEGLCKGDRIDEALRLYELMRGNNV--PADIFTYNNMIECISKLGMVEQAEKVLKTM 59
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S YT F + ++ + + + +V + II K+ +
Sbjct: 60 EESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKF 119
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDIL------------------------------- 148
++AL++ C+PD +TY ++D L
Sbjct: 120 DEALVVLKVSIEAGCEPDEVTYFSIVDPLCNMEDWESALRVLELAQERKCPATNLLYSRL 179
Query: 149 -------GRVGRVNDMLNEFASMKEA--------GVVPDFISYNTLLNNLRKIRRLDLCL 193
G+V +L + + G PD + Y+ +++ L + D
Sbjct: 180 MKCLCKTGKVEAACQLLEDLTNGSRGSEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGF 239
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+ + M E G+KPD + YT + +F R+ ++++ RL M + P + Y +L+ L
Sbjct: 240 VVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEIMVEAGCYPDVISYNTLLFAL 299
Query: 254 KKMGKVDLAMTIFEEM 269
G+ + A +F+ M
Sbjct: 300 CSAGQEEEACRLFQVM 315
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 12/222 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LC + +A+R+L+ +++ N Y+ ++ +T ++ + Q+L+DL SR
Sbjct: 145 VDPLCNMEDWESALRVLELAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSR 204
Query: 65 T----LSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPES------IIVVNRIIFAF 113
L D C + I+ D + + E V + + E +V ++AF
Sbjct: 205 GSEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAF 264
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+S +++ A + + + C PD+I+YN +L L G+ + F M E G+ P+
Sbjct: 265 CRSARLDDACRLLEIMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNV 324
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+Y L+ L ++L+ F M S PD+ TY ALI
Sbjct: 325 FTYTQLIRALCSTKKLEGARHLFNFMKLSKCVPDMETYKALI 366
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN +++ L + R+++ L + M+ V D +YN ++ + K+ ++ + M
Sbjct: 1 YNCLIEGLCKGDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTME 60
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
ES KPD YT +I+ F + GN + ++ L MK+ P V+ +I L K K D
Sbjct: 61 ESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFD 120
Query: 261 LAMTIFE 267
A+ + +
Sbjct: 121 EALVVLK 127
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN L+ L K R+D L + M + + D+ TY +I+ + G +E++ ++ M+
Sbjct: 1 YNCLIEGLCKGDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTME 60
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +P ++Y +I+ K+G A+ + M +
Sbjct: 61 ESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEA 97
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 129/257 (50%), Gaps = 7/257 (2%)
Query: 18 AVRLLQSLRDKNIFLPNAYNCVLVASA----ETNDIDLSFQILKDLLVSSRTLSSDCYTN 73
AV L + + + L + +++ A E++D+ +++ D + L D Y
Sbjct: 134 AVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDL---CELVDDFIKKGGNLGFDMYIM 190
Query: 74 FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK 133
++F+ D ++ + ++V S+ N +I FAK+ ++E+AL ++
Sbjct: 191 IIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESG 250
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
P+L+T+N +++ ++G V+D + E G++PD I++ +L++ L +LD
Sbjct: 251 FSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAF 310
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
F EM E G++P++ TY LI G++ +++ L N MK I P Y + + I +
Sbjct: 311 NCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSF 370
Query: 254 KKMGKVDLAMTIFEEMN 270
+M K++ A +F +M+
Sbjct: 371 CRMRKIEKAQKLFNDMS 387
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 102/229 (44%), Gaps = 1/229 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+YN V+ A+ +++ + + +K + S + + + ++ + F++ V
Sbjct: 222 SYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMV 281
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
++ +I +I + Q++ A F + +P++ TYN+++ L G V
Sbjct: 282 MEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHV 341
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + MK G+ PD S+N + + ++R+++ F +M G+ PD TY AL
Sbjct: 342 SKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNAL 401
Query: 215 IDSFGRTGNIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLA 262
I + ++E+ + M+ I + Y ++ L KMG+ A
Sbjct: 402 IKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEA 450
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G PD +YNTL++ + + +D L ++M +GI+P+++TYT L+D F
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+EE++ + MK++ + + YRSL+
Sbjct: 61 VEEAVCVLERMKEKGVSATEATYRSLVHG 89
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+PD TYN ++ + R G V++ L M+ AG+ P+ ++Y L++ R++ +
Sbjct: 6 CRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAV 65
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
M E G+ TY +L+ R E + R+ ++ + Y +L+ L
Sbjct: 66 CVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCL 125
Query: 254 KK 255
K
Sbjct: 126 SK 127
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M G +PD TY L+ R G ++E+LRL M++ IRP++ Y L+D +
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60
Query: 259 VDLAMTIFEEM 269
V+ A+ + E M
Sbjct: 61 VEEAVCVLERM 71
>gi|302792086|ref|XP_002977809.1| hypothetical protein SELMODRAFT_52561 [Selaginella moellendorffii]
gi|300154512|gb|EFJ21147.1| hypothetical protein SELMODRAFT_52561 [Selaginella moellendorffii]
Length = 419
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 135/274 (49%), Gaps = 8/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G AA +L ++++++ P+ Y+ ++ + + +DI ++ +++
Sbjct: 100 NSLLAVLCKNGRRYAAWKLFLAMKEEDGISPDCVTYSILITNTGDGSDIAEPCRLFLEMM 159
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + +++ D Q L F +++ Q P S+ V IIF++ +S +++
Sbjct: 160 DSGCSPDIVVHSSMVNLLFKCGDVRQTLDFFKQMAQRGKPLSVAVFTSIIFSYVRSGRMD 219
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA---SMKEAGVVPDFISYN 177
A L+F +GL+ + I ++ ++D+L+ F+ MK PD ++Y
Sbjct: 220 SAYLLF---RGLRDVSGYVHQRIYNALICGFANIDDVLHAFSLFKEMKANSFAPDQVTYR 276
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T++ L + +L EM +G PDL+TY L+ G TG+ + + +L D++
Sbjct: 277 TMVALLARHAKLFQAQDTLEEMKANGFTPDLVTYNKLMAMLGETGDFKGAFKLLQDLESC 336
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ Y Y +L+ NL + KV A +F+E+ +
Sbjct: 337 GLQADGYTYSALLHNLGRHRKVKTACKLFDELEN 370
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 118/236 (50%), Gaps = 5/236 (2%)
Query: 44 AETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI 103
A +DL+ +++K++ YT+ + ++ E+++Q S+
Sbjct: 2 ARAKRMDLAEELMKEMEEGGNKADFYVYTSLVSGHCQANRPGDAIVHYEQMIQERMEPSL 61
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
++ N +I K+ +++A +F I KP+L++YN +L +L + GR F +
Sbjct: 62 VIHNMLIDCLGKAGYVDRACSVFQEISKRGLKPELVSYNSLLAVLCKNGRRYAAWKLFLA 121
Query: 164 MKEA-GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
MKE G+ PD ++Y+ L+ N + F EM +SG PD++ ++++++ + G
Sbjct: 122 MKEEDGISPDCVTYSILITNTGDGSDIAEPCRLFLEMMDSGCSPDIVVHSSMVNLLFKCG 181
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
++ ++L F M Q+ S+ V+ S+I + + G++D A +F L D++G
Sbjct: 182 DVRQTLDFFKQMAQRGKPLSVAVFTSIIFSYVRSGRMDSAYLLFR----GLRDVSG 233
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 98/243 (40%), Gaps = 1/243 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
L K G+V + + + + L A + ++ + + +D ++ + + L S +
Sbjct: 177 LFKCGDVRQTLDFFKQMAQRGKPLSVAVFTSIIFSYVRSGRMDSAYLLFRGLRDVSGYVH 236
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y F DD +E+ + + ++ A+ ++ +A +
Sbjct: 237 QRIYNALICGFANIDDVLHAFSLFKEMKANSFAPDQVTYRTMVALLARHAKLFQAQDTLE 296
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K PDL+TYN ++ +LG G ++ G+ D +Y+ LL+NL + R
Sbjct: 297 EMKANGFTPDLVTYNKLMAMLGETGDFKGAFKLLQDLESCGLQADGYTYSALLHNLGRHR 356
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
++ F E+ G KP +TY A + + ++ M++ + P + Y
Sbjct: 357 KVKTACKLFDELENRGHKPCAMTYNAYVGVLAMADMVNDANEAHRKMRELGLLPDLVTYD 416
Query: 248 SLI 250
LI
Sbjct: 417 ELI 419
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + +R+DL +EM E G K D YT+L+ + +++ + M Q+++ PS
Sbjct: 1 LARAKRMDLAEELMKEMEEGGNKADFYVYTSLVSGHCQANRPGDAIVHYEQMIQERMEPS 60
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ ++ LID L K G VD A ++F+E++
Sbjct: 61 LVIHNMLIDCLGKAGYVDRACSVFQEIS 88
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 62/122 (50%)
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L R R++ M+E G DF Y +L++ + R ++++ +M + ++P
Sbjct: 1 LARAKRMDLAEELMKEMEEGGNKADFYVYTSLVSGHCQANRPGDAIVHYEQMIQERMEPS 60
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
L+ + LID G+ G ++ + +F ++ ++ ++P + Y SL+ L K G+ A +F
Sbjct: 61 LVIHNMLIDCLGKAGYVDRACSVFQEISKRGLKPELVSYNSLLAVLCKNGRRYAAWKLFL 120
Query: 268 EM 269
M
Sbjct: 121 AM 122
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 38/275 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ CKAGN A+ + +N L+ ++
Sbjct: 264 NTMIKGYCKAGNTKKAMEKFTDMEKRN--------------------------LEPDKIT 297
Query: 63 SRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
TL CY+ NF D C L +EE P + +V I K +
Sbjct: 298 YLTLIQACYSEGNF-------DSCLHLYQEMEERGLEIPPHAYSLV---IGGLCKDGRTV 347
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F+++ CK ++ Y ++D G+ G VN+ +N F MK G PD ++Y ++
Sbjct: 348 EGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIV 407
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K RLD + YF ++ + + + Y++LID G+ G ++E+ + F +M ++
Sbjct: 408 NGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCP 467
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
Y Y +LID L K GK++ A+ +F+ M D
Sbjct: 468 QDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCD 502
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 35/227 (15%)
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
R+F +LL + + S+ N ++ S IE A +F+ ++ K
Sbjct: 198 RSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIG 257
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+++YN ++ + G + +F M++ + PD I+Y TL+ D CL
Sbjct: 258 PDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHL 317
Query: 196 FREMGESGI-----------------------------------KPDLLTYTALIDSFGR 220
++EM E G+ K ++ YTALID++G+
Sbjct: 318 YQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGK 377
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
GN+ E++ LF MK + P Y +++ L K G++D A+ FE
Sbjct: 378 NGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFE 424
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 11/244 (4%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS-DCYTNFARAFIMTDDCTQLLIFI 91
PN VL + A D++F+ + +CY + ++ D ++
Sbjct: 119 PNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIF 178
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E + ++ N +I +F +E+ L ++ +K +P L T+N +L+
Sbjct: 179 GEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLN----- 233
Query: 152 GRVNDMLNE-----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
G VN M E F M+ + PD +SYNT++ K + F +M + ++P
Sbjct: 234 GLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEP 293
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D +TY LI + GN + L L+ +M+++ + + Y +I L K G+ ++F
Sbjct: 294 DKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVF 353
Query: 267 EEMN 270
E MN
Sbjct: 354 ENMN 357
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 10/267 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS---FQILKDLL 60
I+ K GNV+ A+ L + ++ + F P+ Y ++ ++ +D + F+ KD
Sbjct: 372 IDAYGKNGNVNEAINLFERMKGEG-FEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNE 430
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V+ + Y++ + F EE+V+ P+ N +I A AKS ++E
Sbjct: 431 VAVNAMF---YSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKME 487
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL++F ++ C + TY I++ L + R + L + M + G+ P S+ L
Sbjct: 488 EALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALS 547
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L ++ E+ G+ P+ + +I+ + G E++ +L + + +
Sbjct: 548 VGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIVDRGRE 606
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE 267
V LI+ L+K G DLAM +
Sbjct: 607 VPGRVRTILINALRKAGNADLAMKLMH 633
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 132/270 (48%), Gaps = 12/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETN---DIDLSF--QILKD 58
I + G+ S AV L +S+R ++ PN +YN ++ A A+ D+ + F ++L +
Sbjct: 220 ISAYGRNGHFSDAVDLFRSMRSWGVY-PNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAE 278
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+V R L+ + + + M + +LL E+ Q N + K Q
Sbjct: 279 GIVPDR-LTYNSLLSVCASKGMWETAQKLL---SEMDQKGIVRDAFTYNTYLDTLCKGGQ 334
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ A + + + + P ++TY+ ++D + + D LN + MK + D +SYNT
Sbjct: 335 IDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNT 394
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ K+ R D + +EM G+K D++TY AL+ +GR G +E RLF +MK
Sbjct: 395 MVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWN 454
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
I P+ Y ++ID K G AM ++++
Sbjct: 455 IYPNTLTYSTMIDVYTKGGMFQEAMDVYKD 484
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
F++ C +I+ ++ +IA + +V+ +I + +I AL +F+ +
Sbjct: 157 FLLATKCFDFIIW-KQNGRIAKGK---LVSTMIGTLGRLGEINHALRLFESARLEGHGNT 212
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR-RLDLCLIYF 196
+ +++ ++ GR G +D ++ F SM+ GV P+ ISYN+L++ K D+ + +F
Sbjct: 213 VYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFF 272
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM GI PD LTY +L+ G E + +L ++M Q+ I + Y + +D L K
Sbjct: 273 DEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKG 332
Query: 257 GKVDLAMTIFEEMNS 271
G++DLA + EEM+S
Sbjct: 333 GQIDLARRVLEEMSS 347
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 95/179 (53%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+EE+ +++ + +I AK+ +E AL +++ +K D ++YN ++ I +
Sbjct: 342 LEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAK 401
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+GR ++ + + M+ G+ D ++YN LL+ + D F EM I P+ LT
Sbjct: 402 LGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLT 461
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ +ID + + G +E++ ++ D K+ Q+ + Y S+ID+L K G V+ ++ + M
Sbjct: 462 YSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAM 520
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 121/251 (48%), Gaps = 38/251 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ LCK G + A R+L+ + + ++ P Y+ ++ A+ N ++ + + +++
Sbjct: 323 NTYLDTLCKGGQIDLARRVLEEMSSRRVW-PTVVTYSTMIDGCAKANLLEDALNLYEEMK 381
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ R++S D + N ++ +AK + +
Sbjct: 382 L--RSISVD---------------------------------RVSYNTMVGIYAKLGRFD 406
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ ++ K D++TYN +L GR G +++ F MK + P+ ++Y+T++
Sbjct: 407 EAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMI 466
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + +++ ++ ++ D++ YT++IDS + G +E S+ L M ++ I+
Sbjct: 467 DVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIK 526
Query: 241 PSIYVYRSLID 251
P++ + S+ID
Sbjct: 527 PNVVTFNSIID 537
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 7/283 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I C+ N+ A LLQ + + YN ++ + + + Q+L+ +
Sbjct: 156 NTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA 215
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S Y++F + +E++ +++ N I+ KS +I+
Sbjct: 216 SGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDT 275
Query: 122 ALLIFDHIKGL-KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + + C +++ Y+ V+D L ++GR + + +M AG PD ++Y++L+
Sbjct: 276 ALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLV 335
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-----K 235
N L K +++ + REM G KP+ +TY +L+ G + E+ R+ +M
Sbjct: 336 NGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGG 395
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
PS+ Y +LI L K G++D A+ F+ M S D G
Sbjct: 396 GHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 128/274 (46%), Gaps = 5/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + K G RLL+++ ++I PN +YN +L + + ++++D++
Sbjct: 14 NALVNGFSKQGRPGDCERLLETMAARDI-QPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D Y+ + + ++EV+ ++ +++ + KS +
Sbjct: 73 SRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSAR 132
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +AL + + + C P LIT+N ++ R + + M +GV D ++YNT
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNT 192
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ L K RL M SG PD++ Y++ + ++G + ++ ++ M+
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSH 252
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y +++D L K GK+D A+ + E+M SS
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
S ++ + ++ + K+ ++E++ + + +PD + Y V+ L + R+ + L
Sbjct: 78 STPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEAL 137
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M AG P I++NTL++ + + L++ ++M SG+K D++TY L+D
Sbjct: 138 ELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGL 197
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ G ++E+ +L MK P + Y S + L K GKV A + E+M S D
Sbjct: 198 CKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHD 254
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 112/239 (46%), Gaps = 9/239 (3%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
++ LCK+G V A ++L+ +RD + PN YN +L ++ ID + ++++ + S
Sbjct: 228 FVYGLCKSGKVLDAHQVLEQMRDSH-HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286
Query: 63 SRT-LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L+ Y+ + +E + + ++ + ++ K+ +IE+
Sbjct: 287 DGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEE 346
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVV--PDFISY 176
A+ + CKP+ +TY ++ L GR+ M+ E +S G P +Y
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTY 406
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
N L+ L K R+D L +F+ M G PD ++Y+ +++ R+G ++ + ++++
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C P+ +T+N +++ + GR D +M + P+ +SYN LL L K+ R
Sbjct: 6 CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65
Query: 194 IYFREMGESGIK--PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
R+M G + PD++TY+ L+ + + G +EES L ++ + +RP +Y ++
Sbjct: 66 ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125
Query: 252 NLKK 255
+L K
Sbjct: 126 SLCK 129
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 86/214 (40%), Gaps = 37/214 (17%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ P + + N ++ F+K + + + + +P++++YN +L+ L ++ R +
Sbjct: 3 RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62
Query: 156 DMLNEFASMKEAG--VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT- 212
+ M G PD ++Y+TLL+ K +++ +E+ G++PD L YT
Sbjct: 63 EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122
Query: 213 ----------------------------------ALIDSFGRTGNIEESLRLFNDMKQQQ 238
LI R N+E + L M
Sbjct: 123 VVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASG 182
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ + Y +L+D L K G++ A + E M +S
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G P+ +++N L+N K R C M I+P++++Y L++ +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 224 IEESLRLFNDMKQQQIR--PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+ L DM + R P + Y +L+ K GKV+ + + +E+
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEV 108
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 97/180 (53%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
EV Q +I N +I A ++S +E A+ +F+ + +C+PDL TYN ++ + GR G
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCG 342
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ + F + E G +PD I+YN+LL K +D ++ ++G K + +TY
Sbjct: 343 KAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYN 402
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+I +G+ G ++ ++ L+++M+ P Y +ID+L KM ++ A + E+M +
Sbjct: 403 TMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDA 462
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 38/270 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + + G A RL + L +K F+P+A YN +L A A+ ++D
Sbjct: 332 NAMVSVHGRCGKAEEAERLFRELVEKG-FMPDAITYNSLLYAFAKEGNVD---------- 380
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ C E++V+ ++ I N +I + K +++
Sbjct: 381 ----KVEHTC---------------------EQLVKAGFKKNEITYNTMIHMYGKMGRLD 415
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ ++D ++ + C PD +TY +++D LG++ R+ + M +AG+ P I+++ L+
Sbjct: 416 LAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALI 475
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K R F M SG+KPD L Y ++D F R+G+ E+ L L+ M R
Sbjct: 476 CAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYR 535
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P +Y+ L+ L K K + + ++M
Sbjct: 536 PDDDMYQVLLVALAKEDKCEEIEEVIQDME 565
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%)
Query: 21 LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIM 80
L++ LR + +N ++ A AE+ + + + +++ + + D RA I+
Sbjct: 768 LVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIV 827
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
+L + +EE+ + S V ++ AFAK+ + + + I++ +K P++
Sbjct: 828 DGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHL 887
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
Y ++ +L R D+ A M+ AG PD N LLN D +R +
Sbjct: 888 YRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSIL 947
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
E+G++PD TY LI + R+ EE L N+M ++ + P + Y+SL+ K +
Sbjct: 948 EAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELRE 1007
Query: 261 LAMTIFEEMNS 271
A IFEEM S
Sbjct: 1008 QADQIFEEMRS 1018
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 129/271 (47%), Gaps = 5/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRL--LQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
N I K+G ++A V L L +R + P+ YN ++ A +++++++ + + +D
Sbjct: 260 NTLINARSKSGCLAAGVALDLLFEVRQSGL-RPDVITYNTLISACSQSSNLEDAVTVFED 318
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ S Y + E+V+ I N +++AFAK
Sbjct: 319 MIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGN 378
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++K + + K + ITYN ++ + G++GR++ + + M+ G PD ++Y
Sbjct: 379 VDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTV 438
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++++L K+ R+ +M ++G+KP L+ ++ALI ++ + G ++ F+ M
Sbjct: 439 MIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASG 498
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P Y ++D + G + + ++ +M
Sbjct: 499 VKPDRLAYLVMLDVFARSGDTEKMLCLYRKM 529
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 5/180 (2%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E + + ++P S V ++ ++RQ A +F G + +N ++ + R
Sbjct: 178 EWLARSSAPASRAVAV-VLGVLGRARQDSIAEEVFLRFAGEGAT--VQVFNAMMGVYARS 234
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL--DLCLIYFREMGESGIKPDLL 209
GR +D +M + G+ PD +S+NTL+N K L + L E+ +SG++PD++
Sbjct: 235 GRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVI 294
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY LI + ++ N+E+++ +F DM + RP ++ Y +++ + GK + A +F E+
Sbjct: 295 TYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFREL 354
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
ASP+ + V R + +AL F+ + P +VL +LGR + D
Sbjct: 153 ASPDEVAFVVRAV----GESSWRRALDAFEWL-ARSSAPASRAVAVVLGVLGRARQ--DS 205
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ E ++ AG +N ++ + R D M + GI PDL+++ LI++
Sbjct: 206 IAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINA 265
Query: 218 FGRTGNIEE--SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++G + +L L +++Q +RP + Y +LI + ++ A+T+FE+M +S
Sbjct: 266 RSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIAS 322
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 55/304 (18%), Positives = 108/304 (35%), Gaps = 36/304 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLV-ASAETNDIDLSFQILKDLLV 61
NG + L G + +++ L+D N + + +L+ A A+ D+ +I +
Sbjct: 819 NGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKA 878
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y + + + + I E+ + ++N ++ + + ++
Sbjct: 879 AGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDR 938
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
++ I +PD TYN ++ + R R + M + G+ P SY +LL
Sbjct: 939 TTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLA 998
Query: 182 NLRKIRRLDLCLIYFREM-----------------------------------GESGIKP 206
K + F EM E GI+P
Sbjct: 999 ASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEP 1058
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ T L+ S+G G E+ + N++K + S Y ++ D K G + T
Sbjct: 1059 TIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKL 1118
Query: 267 EEMN 270
EM
Sbjct: 1119 LEMK 1122
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E CK AV+LL +RDK P+ YN V+ + +D + + LK L
Sbjct: 194 LEATCKRSGYKQAVKLLDEMRDKGCA-PDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYG 252
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV------------------ 105
++ Y + + + E+ + P +++
Sbjct: 253 CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAM 312
Query: 106 -----------------VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
N I+ AF K +++++A+ + + C PD+++YN +L L
Sbjct: 313 EILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTAL 372
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G V+ + +K+ G P ISYNT+++ L K + + L EM G++PD+
Sbjct: 373 CRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDI 432
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY+ + R G IEE+++ F ++ IRP+ +Y +++ L K A+ +F
Sbjct: 433 ITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTY 492
Query: 269 MNSS 272
M S+
Sbjct: 493 MVSN 496
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 11/273 (4%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
C I+KLC +G + A R+L S + +YN ++ T +D + + LV
Sbjct: 93 CAALIKKLCASGRTAEARRVLASCEPDVM----SYNAMVAGYCVTGQLDNARR-----LV 143
Query: 62 SSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ + D YT R L ++++++ ++ ++ A K
Sbjct: 144 AAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGY 203
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A+ + D ++ C PD++TYN+V++ + + GRV+D + S+ G P+ +SYN +
Sbjct: 204 KQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIV 263
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L L R + EM G P+++T+ LI R G +E ++ + + + +
Sbjct: 264 LKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGC 323
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ Y ++ K K+D AM E M SS
Sbjct: 324 TPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS 356
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 120/303 (39%), Gaps = 39/303 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR-DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + C G + A RL+ ++ + + + YN ++ D + +L D+L
Sbjct: 124 NAMVAGYCVTGQLDNARRLVAAMPMEPDTY---TYNTLIRGLCGRGRTDNALAVLDDMLR 180
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
YT A Q + ++E+ I+ N ++ + +++
Sbjct: 181 RGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDD 240
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM----------------- 164
A+ + C+P+ ++YNIVL L R D A M
Sbjct: 241 AMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLIS 300
Query: 165 ------------------KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G P+ +SYN +L+ K +++D + + M SG P
Sbjct: 301 FLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYP 360
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D+++Y L+ + R G ++ ++ L + +K + P + Y ++ID L K GK + A+ +
Sbjct: 361 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELL 420
Query: 267 EEM 269
EM
Sbjct: 421 NEM 423
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC A A +L+ + K PN +N ++ ++ + +IL +
Sbjct: 264 LKGLCTAERWEDAEKLMAEMSRKG-RPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T +S Y AF + + F+E +V I+ N ++ A + +++ A+
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ +K C P LI+YN V+D L + G+ + L M G+ PD I+Y+T+ + L
Sbjct: 383 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGL 442
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F ++ + GI+P+ + Y A++ + ++ LF M P+
Sbjct: 443 CREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNE 502
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI+ L G V A + E+ S
Sbjct: 503 STYTILIEGLAYEGLVKEAREMMAELCS 530
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 11/191 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC+ G V AAV LL L+DK + +YN V+ + + + ++L +++
Sbjct: 366 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMV- 424
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ L D Y+ + + + +V + + ++ N I+ K R
Sbjct: 425 -TKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRAT 483
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A+ +F ++ C P+ TY I+++ L G V + A + GVV +
Sbjct: 484 HSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV------SKT 537
Query: 180 LNNLRKIRRLD 190
L N IR LD
Sbjct: 538 LVNKGAIRLLD 548
>gi|302816774|ref|XP_002990065.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
gi|300142185|gb|EFJ08888.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
Length = 458
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 26/279 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDID----LSFQILKDL 59
I+ C G +S A LL + + I PN YN +L A A++ +D L+ Q+L+
Sbjct: 135 IKSCCDCGQLSRASDLLADMTARGI-QPNRVTYNIILDAYAKSGSLDKLHDLALQMLQSP 193
Query: 60 LVSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S R D ++ A + F D ++ + + + + + ++ ++ A+AK+
Sbjct: 194 SPSCRP---DHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAAYAKAE 250
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+K + +I + D +TYNI+++ GR GR ML F SMK GV PD ++Y
Sbjct: 251 MFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVTYC 310
Query: 178 TLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
TL+N RK+ RL +M ++PD Y +++D++ R +I R F
Sbjct: 311 TLINFYGKFGMQRKLPRL------LEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYF 364
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA--MTIFEE 268
M++Q +P Y LI + G D A M + +E
Sbjct: 365 AAMQEQGCKPDHLTYNILIQAYRSQGLTDKADVMAVEQE 403
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 13/274 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQS-LRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+E L K A L Q+ L D A+ ++ A +N + + ++L+ + +
Sbjct: 64 LEMLGKCKRPDEAASLFQTMLADGCGPSREAFTALMSAYTRSNLMSTAMEVLQAMNATPH 123
Query: 65 TLSSDCYTNFARAFIMTDDCTQLL----IFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S D +T ++ DC QL + + + P + N I+ A+AKS ++
Sbjct: 124 C-SPDVFT-YSLLIKSCCDCGQLSRASDLLADMTARGIQPNRV-TYNIILDAYAKSGSLD 180
Query: 121 K----ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
K AL + C+PD + N ++ G G + M F + PD ++
Sbjct: 181 KLHDLALQMLQS-PSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTL 239
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++L+ K D R + + D +TY LI+++GR G + L+ F MK
Sbjct: 240 HSLMAAYAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKC 299
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RP Y +LI+ K G + E+M+
Sbjct: 300 GGVRPDSVTYCTLINFYGKFGMQRKLPRLLEQMS 333
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 118 QIEKALLIFDHIKGLKC-KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
Q E AL +F+ ++ + +P TY +L++LG+ R ++ + F +M G P ++
Sbjct: 36 QWEAALKVFELLRSQQWYQPYAGTYIRLLEMLGKCKRPDEAASLFQTMLADGCGPSREAF 95
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGES-GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
L++ + + + + M + PD+ TY+ LI S G + + L DM
Sbjct: 96 TALMSAYTRSNLMSTAMEVLQAMNATPHCSPDVFTYSLLIKSCCDCGQLSRASDLLADMT 155
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKA 286
+ I+P+ Y ++D K G +D + +M S S P + R A
Sbjct: 156 ARGIQPNRVTYNIILDAYAKSGSLDKLHDLALQMLQSPSPSCRPDHWSRNA 206
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 133/260 (51%), Gaps = 3/260 (1%)
Query: 14 NVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
++ +A R S+ + PN YN ++ A + +L+D+ + ++ Y
Sbjct: 137 SLPSARRFFDSMLSDGV-APNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTY 195
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
AF + + ++ + + +++ N ++ K+ ++E A +FD +
Sbjct: 196 NTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVK 255
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
PD ++YN ++ +VG ++ L+ FA M G++PD +++ +L++ + K L+
Sbjct: 256 EGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLER 315
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ REM E G++ + +T+TALID F + G ++++L +M+Q +I+PS+ Y +LI+
Sbjct: 316 AVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALIN 375
Query: 252 NLKKMGKVDLAMTIFEEMNS 271
+G++D A + EM +
Sbjct: 376 GYCMVGRMDEARELVREMEA 395
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 124/261 (47%), Gaps = 34/261 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I +CKAGN+ AV L++ +R++ + + N+I +F L D
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGL--------------QMNEI--TFTALID------- 340
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
F + + D L+ + E+ Q S++ N +I + ++++A +
Sbjct: 341 -------GFCKKGFLDD----ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEAREL 389
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ KPD++TY+ +L + G + M E GV+PD I+Y++L+ L +
Sbjct: 390 VREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCE 449
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+RL + F+ M G++PD +TYT+LID + GN+E +L L ++M + + P +
Sbjct: 450 EKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVT 509
Query: 246 YRSLIDNLKKMGKVDLAMTIF 266
Y LI+ L K + A +
Sbjct: 510 YSVLINGLSKSARTKEAQRLL 530
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 121/271 (44%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C+AG V A RL+ +R+ + PN +N V+ + ++ + ++ +++
Sbjct: 196 NTLVAAFCRAGEVDRAERLVDMMREGGL-KPNLVTFNSVVNGICKAGRMEDARKVFDEMV 254
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + L E+ + ++ +I K+ +E
Sbjct: 255 KEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLE 314
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + ++ + + IT+ ++D + G ++D L M++ + P + YN L+
Sbjct: 315 RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI 374
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N + R+D REM G+KPD++TY+ ++ ++ + G+ + +L M + +
Sbjct: 375 NGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVL 434
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P Y SLI L + ++ A +F+ M S
Sbjct: 435 PDAITYSSLIRVLCEEKRLGDAHVLFKNMIS 465
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 116/297 (39%), Gaps = 20/297 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G + A L++ + K + P+ Y+ +L A + D +FQ+ + +L
Sbjct: 371 NALINGYCMVGRMDEARELVREMEAKGV-KPDVVTYSTILSAYCKNGDTHSAFQLNQQML 429
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y++ R + + ++ + + +I K +E
Sbjct: 430 ENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVE 489
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + D + PD++TY+++++ L + R + + VP I Y+ L+
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549
Query: 181 NNLRKIR-RLDLCLI--------------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
R + L L+ ++ + + D Y+ LI R GN+
Sbjct: 550 RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVM 609
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDLAGPK 280
++L M Q P+ SLI L + G V A + +++ SL+D K
Sbjct: 610 KALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASK 666
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 135/274 (49%), Gaps = 8/274 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN +AA+RLL+S+ N P+ Y ++ + + + +F + ++
Sbjct: 181 INGLCKVGNTNAAIRLLRSMEQGNC-QPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV--G 237
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ +S D YT+ + + + + +++ +++ + ++ A K +I +
Sbjct: 238 QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITE 297
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + D + +P+++TYN ++D +++ + F +M G P+ ISYNTL+N
Sbjct: 298 AHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLIN 357
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
KI+R+D F EM + + P+ +TY L+ G +++++ LF++M P
Sbjct: 358 GYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQIP 416
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ YR L+D L K +D AM + + + S D
Sbjct: 417 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 450
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 96/181 (53%), Gaps = 1/181 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+ +V ++I N +I + K ++++KA +F+ + + P+ +TYN ++ V
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HV 396
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GR+ D + F M G +PD +Y LL+ L K LD + + + S + PD+ Y
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
T +ID R G +E + +F+++ + +RP++ Y +I+ L + G +D A +F EM+
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 516
Query: 272 S 272
+
Sbjct: 517 N 517
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + +N +I +F ++ A + I L +PD T+ ++ L G++ D L+
Sbjct: 101 PPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALH 160
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M G P+ ++Y TL+N L K+ + + R M + +PD++ YT++IDS
Sbjct: 161 LFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 220
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + E+ LF+ M Q I P I+ Y SLI +L + + T+ +M +S
Sbjct: 221 KDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 273
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 90/176 (51%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ + P S + NR++ + AK++Q + + + PD+ T NI+++ + R
Sbjct: 60 MLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNR 119
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ + A + + G PD ++ TL+ L ++ L F +M G +P+++TY
Sbjct: 120 LGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT 179
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ + GN ++RL M+Q +P + VY S+ID+L K +V A +F +M
Sbjct: 180 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM 235
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 12/225 (5%)
Query: 46 TNDIDLSFQILKDLLVSSRTLSSDCYTN-FARAFIMTDDCTQLLIFIEEVVQIASPESII 104
+N +D SF I D+ + ++S C+ N AF + + +++++
Sbjct: 92 SNQMD-SFGIPPDVYTLNILINSFCHLNRLGFAFSV----------LAKILKLGHQPDTA 140
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+I +I AL +FD + G +P+++TY +++ L +VG N + SM
Sbjct: 141 TFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM 200
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ PD + Y +++++L K R++ F +M GI PD+ TYT+LI S
Sbjct: 201 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 260
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L N M +I P + ++ +++D L K GK+ A + + M
Sbjct: 261 KHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 305
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 33 PNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+ Y N ++ + N + +F +L +L + +T R + L
Sbjct: 102 PDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHL 161
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ +++ +I K A+ + ++ C+PD++ Y ++D L +
Sbjct: 162 FDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 221
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V + N F+ M G+ PD +Y +L+++L + +M S I PD++
Sbjct: 222 DRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVI 281
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ ++D+ + G I E+ + + M + + P++ Y +L+D ++D A+ +F+ M
Sbjct: 282 FSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 119/266 (44%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G ++ A ++ + + + PN YN ++ +++D + ++ ++ +
Sbjct: 286 VDALCKEGKITEAHDVVDMMIIRGV-EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 344
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + EE+ Q + + N ++ R ++ A+
Sbjct: 345 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGR-LQDAI 403
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + PDL TY I+LD L + +++ + +++ + + PD Y +++ +
Sbjct: 404 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 463
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L+ F + G++P++ TYT +I+ R G ++E+ +LF +M P
Sbjct: 464 CRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDG 523
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ L + + A+ + +EM
Sbjct: 524 CTYNTITQGLLQNKEALRAIQLLQEM 549
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 104/243 (42%), Gaps = 22/243 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C + AV++ ++ N + PN +YN ++ + +D + + +++
Sbjct: 318 NALMDGHCLQSEMDEAVKVFDTMV-HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMC 376
Query: 61 --------VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
V+ TL C+ + I +F E V P+ + RI+
Sbjct: 377 QKELIPNTVTYNTLMHXCHVGRLQDAIA--------LFHEMVAHGQIPD--LATYRILLD 426
Query: 113 F-AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+ K +++A+ + I+G PD+ Y IV+D + R G + + F+++ G+ P
Sbjct: 427 YLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRP 486
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ +Y ++N L + LD F EM +G PD TY + + +++L
Sbjct: 487 NVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLL 546
Query: 232 NDM 234
+M
Sbjct: 547 QEM 549
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CKAG + A+ + + KN+ P+ Y ++ A D D + ++
Sbjct: 257 NIMIKGYCKAGKLQKAMEKFRDMEMKNV-KPDKITYMTLIQACYSERDFDTCLSLYLEME 315
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y+ C + E + Q ++ + +I +++K+ +E
Sbjct: 316 ERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSME 375
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F+ +K +PD +TY+++++ L + GR++D + F + GV + + Y +L+
Sbjct: 376 EAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLI 435
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R++ F EM E G D Y A+ID+ + G I+++L LF M+++
Sbjct: 436 DGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCD 495
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y + LID L K K + A+ +++M
Sbjct: 496 QTVYTFTILIDGLFKEHKNEEAIKFWDKM 524
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 50 DLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRI 109
D+ + +K ++ TL CY+ R F D C L + +EE P S +V
Sbjct: 278 DMEMKNVKPDKITYMTLIQACYSE--RDF---DTCLSLYLEMEERGLEIPPHSYSLV--- 329
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
I K R+ +A +F+ + C+ ++ Y ++D + G + + + F MK G
Sbjct: 330 IGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGF 389
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
PD ++Y+ L+N L K RLD + F G+ + + Y +LID G+ G IE++
Sbjct: 390 EPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAEN 449
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
LF +M ++ Y Y ++ID L K GK+D A+ +F M D
Sbjct: 450 LFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCD 495
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 49/241 (20%)
Query: 76 RAFIMTDDCTQLLI-------FIEEVVQIAS-------PESIIVVNRIIFAFAKSRQIEK 121
R +MT+ LI +EE++ + S+ N ++ S IE
Sbjct: 177 RGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIES 236
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F+ + G K PD +TYNI++ + G++ + +F M+ V PD I+Y TL+
Sbjct: 237 AEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQ 296
Query: 182 NLRKIRRLDLCLIYFREMGESGI-----------------------------------KP 206
R D CL + EM E G+ +
Sbjct: 297 ACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRA 356
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
++ YTALIDS+ + G++EE++RLF MK + P Y L++ L K G++D M +F
Sbjct: 357 NVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 416
Query: 267 E 267
+
Sbjct: 417 D 417
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 104 IVVNRIIFA-----FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+ +N + +A K+ +IE A +F+ + C D YN ++D L + G+++ L
Sbjct: 424 VAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQAL 483
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M+E G ++ L++ L K + + + ++ +M + GI P + ++ AL
Sbjct: 484 ALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 543
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G + + ++ +D+ I P + +I+ L K ++ A
Sbjct: 544 CLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEA 586
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 97/235 (41%), Gaps = 16/235 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-----AETNDIDLSFQILKDLL 60
+ LCK+G + + L R+K + A N + AS + I+ + + +++
Sbjct: 400 VNGLCKSGRLDDGMELFDFCRNKGV----AINAMFYASLIDGLGKAGRIEDAENLFEEMS 455
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S CY A Q L + + +++ +I K + E
Sbjct: 456 EKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNE 515
Query: 121 KALLIFDHIKGLKCKPDLITYN---IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+A+ +D + P + ++ I L + G+V R +L++ A M G++P+ ++
Sbjct: 516 EAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPM---GIIPE-TAFE 571
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++N L K +R+ + + G + T LI++ + GN + ++L +
Sbjct: 572 DMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMH 626
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 135/271 (49%), Gaps = 3/271 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
M N I+ LCK V+ A L + + IF P+A Y ++ + +F +L +
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDARGIF-PDAITYTTLIYGFCLLGQLMGAFSLLDE 210
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+++ + Y A + + + + + ++ + ++ + +
Sbjct: 211 MILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGE 270
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ A IF + + P++ +YNI+++ L + RV++ +N M +VPD ++YN+
Sbjct: 271 VQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 330
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ L K R+ L EM G D++TYT+L+D+ + N++++ LF MK++
Sbjct: 331 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+P++Y Y +LID L K G++ A +F+ +
Sbjct: 391 IQPTMYTYTALIDGLCKGGRLKNAQELFQHL 421
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
I C G + A LL + KNI P Y N ++ A + ++ + +L +
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNIN-PGVYIYNILINALCKEGNVKEAKNLLAVMTKEG 250
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ + + + +VQ+ ++ N +I K +++++A+
Sbjct: 251 IKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAM 310
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD +TYN ++D L + GR+ LN M G D ++Y +LL+ L
Sbjct: 311 NLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDAL 370
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + LD F +M E GI+P + TYTALID + G ++ + LF + + +
Sbjct: 371 CKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDV 430
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +I L K G D A+ I +M
Sbjct: 431 WTYTVMISGLCKEGMFDEALAIKSKM 456
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 38/265 (14%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G AV+LL+ + D++ PN YN ++ + KD LV+
Sbjct: 125 LCKIGETRCAVKLLRMIEDRST-RPNVVMYNTIIDG------------LCKDKLVNE--- 168
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ D Y+ I D I +I+ F Q+ A +
Sbjct: 169 AYDLYSEMDARGIFPD--------------------AITYTTLIYGFCLLGQLMGAFSLL 208
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D + P + YNI+++ L + G V + N A M + G+ P ++Y+TL++ +
Sbjct: 209 DEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLV 268
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+ F M + G+ P++ +Y +I+ + ++E++ L +M + + P Y
Sbjct: 269 GEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 328
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
SLID L K G++ A+ + EM+
Sbjct: 329 NSLIDGLCKSGRITSALNLMNEMHH 353
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
SF +L +L + + + + + L F ++VV + ++
Sbjct: 64 SFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLN 123
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
K + A+ + I+ +P+++ YN ++D L + VN+ + ++ M G+ P
Sbjct: 124 GLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y TL+ + +L EM I P + Y LI++ + GN++E+ L
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M ++ I+P + Y +L+D +G+V A IF M
Sbjct: 244 AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 15/272 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI--------FLPNAYNCVLVASAETNDIDLSFQILK 57
I LCK GNV A LL + + I L + Y C++ E + F +
Sbjct: 227 INALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY-CLV---GEVQNAKQIFHAMV 282
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ V+ S + N D+ LL E++ + N +I KS
Sbjct: 283 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLL---REMLHKNMVPDTVTYNSLIDGLCKSG 339
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+I AL + + + D++TY +LD L + ++ F MKE G+ P +Y
Sbjct: 340 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 399
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L K RL F+ + G D+ TYT +I + G +E+L + + M+
Sbjct: 400 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 459
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ + +I +L + + D A + EM
Sbjct: 460 GCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 86/169 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
II N+I+ + AK +Q A+ + ++ + + +T NI+++ +G++ +
Sbjct: 10 IIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLG 69
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ + G PD I+ NTL+ L + L + ++ G + D ++Y L++ + G
Sbjct: 70 KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIG 129
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++L ++ + RP++ +Y ++ID L K V+ A ++ EM++
Sbjct: 130 ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDA 178
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P I N +I AK+ ++AL + D++ C P +TY I+++ L + G +
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M +G P+ + Y +L++ K R+ F EM E+G +PD++T+T +ID
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++GN E++ + F +M + +P++ Y ++I L K+G+V A I + M
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + P + ++ K++++++A +F ++ PD I YN ++D L
Sbjct: 211 VFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGL 270
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G + L +M VP ++Y L+N+L K L+ FR M SG +P+
Sbjct: 271 AKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNS 330
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ YT+LI F ++G ++E+ LF++M + RP + + +ID L K G + A FEE
Sbjct: 331 VIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEE 390
Query: 269 M 269
M
Sbjct: 391 M 391
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ L KA V A + + +K F P+A YN ++ A+ + ++L ++L +
Sbjct: 232 VRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS-----PESIIVVNRIIFAFAKSRQ 118
+ Y + L EE+ ++ + P S+I + +I FAKS +
Sbjct: 291 CVPTEVTYGILVNSLCKAGT----LERAEELFRVMAASGFRPNSVIYTS-LIHGFAKSGR 345
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +FD + +PD+IT+ +++D L + G F M G P+ ++Y T
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L KI R+ + M G PD +TY L+D F + G ++E+ +L +++ +
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAM-TIFEEMNSSLSDL 276
P++ +Y SL+ L G V+ + +FE+ ++ +L
Sbjct: 466 SSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENL 504
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
+Q EE+++ + N +I +FA++R+ + A+ F+ +K +CKPDL T+ I+
Sbjct: 136 SQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLIL 195
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVP-DFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+D L + G F M G VP D + ++ L K +R+ F +M + G
Sbjct: 196 VDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG 255
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
PD + Y +ID + G+ +E+L++ ++M + P+ Y L+++L K G ++ A
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAE 315
Query: 264 TIFEEMNSS 272
+F M +S
Sbjct: 316 ELFRVMAAS 324
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 33/272 (12%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+C I LCK G + A R+ Q + + P+A ++ IL + L
Sbjct: 508 LCCSIIVGLCKTGRLDEACRIFQRMVSEGC-KPDA---------------TTYNILINGL 551
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
SR RAF + D +++ ++ + V + K +++
Sbjct: 552 CRSRE------NRVERAFALLHD-LEMVGYLPDAV---------TYTPLCIGLCKIGEVD 595
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + D++ Y + L G+V+ ++ F M G PD +Y ++
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQI 239
N L K ++L+ +F EM G KP + TYTAL+ + GN++E+ F M + ++
Sbjct: 656 NGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGEL 715
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
S+ +Y +LI K KVD A+ +FE+M S
Sbjct: 716 VGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K G V+ A R+++ + F P++ Y C+L + +D + Q+L +L S
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + Y++ + L E+ A + II K+ ++++A
Sbjct: 466 SSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEA 525
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE---AGVVPDFISYNTL 179
IF + CKPD TYNI+++ L R R N + FA + + G +PD ++Y L
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCR-SRENRVERAFALLHDLEMVGYLPDAVTYTPL 584
Query: 180 LNNLRKIRRLD-----------------------LC--LIY----------FREMGESGI 204
L KI +D LC L Y F+EM G
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD Y +I+ + +E++ + F++M + +P++ Y +L+ L G VD A
Sbjct: 645 APDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFH 704
Query: 265 IFEEM 269
FE M
Sbjct: 705 RFEGM 709
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 10/257 (3%)
Query: 6 IEKLCKA--GNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLV 61
I LC++ V A LL L +LP+A Y + + + ++D + ++L++
Sbjct: 548 INGLCRSRENRVERAFALLHDLEMVG-YLPDAVTYTPLCIGLCKIGEVDRAVKMLEE--A 604
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
SSR ++D YT + + +E+V+ II K +++
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL 664
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG-VVPDFISYNT 178
E A FD + G KP + TY ++ L G V++ + F M G +V + Y+
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDA 724
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K ++D L F +M G P +T +L D R+G E++ L +M
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784
Query: 239 IRPSIYVYRSLIDNLKK 255
P + +++D L+K
Sbjct: 785 SPPHAATFTAILDGLRK 801
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 119/306 (38%), Gaps = 41/306 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCKAG + A L + + F PN+ Y ++ A++ + + + +++ +
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+T + + Q EE+++ +++ II +K ++ A
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + C PD +TY +LD ++GR+++ + + P+ Y++L+ L
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGL 480
Query: 184 R------------------------------------KIRRLDLCLIYFREMGESGIKPD 207
K RLD F+ M G KPD
Sbjct: 481 CDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540
Query: 208 LLTYTALIDSFGRT--GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
TY LI+ R+ +E + L +D++ P Y L L K+G+VD A+ +
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600
Query: 266 FEEMNS 271
EE +S
Sbjct: 601 LEEASS 606
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++AG D +YN L+N L + C EM ++GI P+ ++ LI SF RT
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++ F MK+++ +P ++ + L+D L K G + A +F EM
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEM 215
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P I N +I AK+ ++AL + D++ C P +TY I+++ L + G +
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M +G P+ + Y +L++ K R+ F EM E+G +PD++T+T +ID
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++GN E++ + F +M + +P++ Y ++I L K+G+V A I + M
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + P + ++ K++++++A +F ++ PD I YN ++D L
Sbjct: 211 VFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGL 270
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G + L +M VP ++Y L+N+L K L+ FR M SG +P+
Sbjct: 271 AKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNS 330
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ YT+LI F ++G ++E+ LF++M + RP + + +ID L K G + A FEE
Sbjct: 331 VIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEE 390
Query: 269 M 269
M
Sbjct: 391 M 391
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ L KA V A + + +K F P+A YN ++ A+ + ++L ++L +
Sbjct: 232 VRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS-----PESIIVVNRIIFAFAKSRQ 118
+ Y + L EE+ ++ + P S+I + +I FAKS +
Sbjct: 291 CVPTEVTYGILVNSLCKAGT----LERAEELFRVMAASGFRPNSVIYTS-LIHGFAKSGR 345
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +FD + +PD+IT+ +++D L + G F M G P+ ++Y T
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L KI R+ + M G PD +TY L+D F + G ++E+ +L +++ +
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAM-TIFEEMNSSLSDL 276
P++ +Y SL++ L G V+ + +FE+ ++ L
Sbjct: 466 SSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETL 504
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
+Q EE+++ + N +I +FA++R+ + A+ F+ +K +CKPDL T+ I+
Sbjct: 136 SQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLIL 195
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVP-DFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+D L + G F M G VP D + ++ L K +R+ F +M + G
Sbjct: 196 VDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG 255
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
PD + Y +ID + G+ +E+L++ ++M + P+ Y L+++L K G ++ A
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAE 315
Query: 264 TIFEEMNSS 272
+F M +S
Sbjct: 316 ELFRVMAAS 324
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 33/272 (12%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+C I LCK G + A R+ Q + + P+A ++ IL + L
Sbjct: 508 LCCSIIVGLCKTGRLDEACRIFQRMVSEGC-KPDA---------------TTYNILINGL 551
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
SR RAF + D +E+V + P+++ + K +++
Sbjct: 552 CRSRE------NRVERAFALLHD-------LEKVGYL--PDAV-TYTPLCIGLCKIGEVD 595
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + D++ Y + L G+V+ ++ F M G PD +Y ++
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQI 239
N L K+++L+ +F EM G KP + TYTAL+ + GN++E+ F M + ++
Sbjct: 656 NGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGEL 715
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
S+ +Y +LI K KVD A+ +FE+M S
Sbjct: 716 VGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 43/305 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K G V+ A R+++ + F P++ Y C+L + +D + Q+L +L S
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + Y++ + L E+ A + II K+ ++++A
Sbjct: 466 SSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEA 525
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA---SMKEAGVVPDFISYNTL 179
IF + CKPD TYNI+++ L R R N + FA +++ G +PD ++Y L
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCR-SRENRVERAFALLHDLEKVGYLPDAVTYTPL 584
Query: 180 LNNLRKIRRLD-----------------------LC--LIY----------FREMGESGI 204
L KI +D LC L Y F+EM G
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD Y +I+ + +E++ + F++M + +P++ Y +L+ L G VD A
Sbjct: 645 APDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFH 704
Query: 265 IFEEM 269
FE M
Sbjct: 705 RFESM 709
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 10/257 (3%)
Query: 6 IEKLCKA--GNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLV 61
I LC++ V A LL L +K +LP+A Y + + + ++D + ++L++
Sbjct: 548 INGLCRSRENRVERAFALLHDL-EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE--A 604
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
SSR ++D YT + + +E+V+ II K +++
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKL 664
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG-VVPDFISYNT 178
E A FD + G KP + TY ++ L G V++ + F SM G +V + Y+
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDA 724
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K ++D L F +M G P +T +L D R+G E++ L +M
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784
Query: 239 IRPSIYVYRSLIDNLKK 255
P + +++D L+K
Sbjct: 785 SPPHAATFTAILDGLRK 801
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 121/306 (39%), Gaps = 41/306 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCKAG + A L + + F PN+ Y ++ A++ + + + +++ +
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+T + + Q EE+++ +++ II +K ++ A
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + C PD +TY +LD ++GR+++ + + P+ Y++L+N L
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGL 480
Query: 184 R------------------------------------KIRRLDLCLIYFREMGESGIKPD 207
K RLD F+ M G KPD
Sbjct: 481 CDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540
Query: 208 LLTYTALIDSFGRT--GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
TY LI+ R+ +E + L +D+++ P Y L L K+G+VD A+ +
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600
Query: 266 FEEMNS 271
EE +S
Sbjct: 601 LEEASS 606
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++AG D +YN L+N L + C EM ++GI P+ ++ LI SF RT
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++ F MK+++ +P ++ + L+D L K G + A +F EM
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEM 215
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
+C I LC+ G S A R+L++ R AYN ++ +D + +++ +
Sbjct: 111 LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM 170
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V+ + YT R + L +++++ S++ ++ A KS
Sbjct: 171 PVAPDAYT---YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGF 227
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A+ + D ++ C P+++TYN++++ + R GRV+D + G PD +SY T+
Sbjct: 228 GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTV 287
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L L +R + F EM E P+ +T+ L+ F R G +E ++++ M
Sbjct: 288 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 347
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + +I+ + K G+VD A M S
Sbjct: 348 AANTTLCNIVINTICKQGRVDDAFQFLNNMGS 379
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E +CK+ A+ +L +R K PN YN ++ +D + + L L SS
Sbjct: 218 LEAVCKSTGFGQAMEVLDEMRAKGC-TPNIVTYNVIINGMCREGRVDDAREFLNRL--SS 274
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
D YT + + E+++ + + + ++ F + +E+
Sbjct: 275 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 334
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + + G C + NIV++ + + GRV+D +M G PD ISY T+L
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 394
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R + +EM P+ +T+ I + G IE++ L M +
Sbjct: 395 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I Y +L++ G+VD A+ +F M
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSM 482
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 133/306 (43%), Gaps = 35/306 (11%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN I +CK G V A + L ++ P+ +Y VL + + ++LK+
Sbjct: 353 LCNIVINTICKQGRVDDAFQFLNNMGSYGCS-PDTISYTTVLKGLCRAERWEDAKELLKE 411
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + + + F Q + IE++ + +I+ N ++ F +
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471
Query: 119 IEKALLIFDHIK-------------GL-------------------KCKPDLITYNIVLD 146
++ AL +F + GL C P+++T+N+++
Sbjct: 472 VDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 531
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G +++ + M E G P+ I+YNTLL+ + K + L + +G+ P
Sbjct: 532 FFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSP 591
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D++TY+++I R +EE++++F+ ++ +RP +Y ++ L K D A+ F
Sbjct: 592 DIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFF 651
Query: 267 EEMNSS 272
M S+
Sbjct: 652 AYMVSN 657
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 119/305 (39%), Gaps = 41/305 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLL 60
N + C+ G + AA RL+ S+ P+AY ++ + + + +L D+L
Sbjct: 148 NTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S YT A + Q + ++E+ +I+ N II + +++
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY---- 176
A + + +PD ++Y VL L R D+ FA M E +P+ +++
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323
Query: 177 -------------------------------NTLLNNLRKIRRLDLCLIYFREMGESGIK 205
N ++N + K R+D + MG G
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD ++YT ++ R E++ L +M ++ P+ + + I L + G ++ A +
Sbjct: 384 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 443
Query: 266 FEEMN 270
E+M+
Sbjct: 444 IEQMS 448
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 26/249 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + C G V +A+ L S+ K PN Y +L +D + ++L ++L
Sbjct: 460 NALVNGFCVQGRVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAEML 515
Query: 61 VSSRTLSSDCYTN----------FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
DC N F + +M D+ +L +E++++ ++I N ++
Sbjct: 516 ------QKDCAPNVVTFNVLVSFFCQKGLM-DEAIEL---VEQMMEHGCTPNLITYNTLL 565
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K E+AL + + PD++TY+ ++ +L R RV + + F +++ G+
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 625
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P + YN +L L K D + +F M +G P+ LTY LI+ ++E+ L
Sbjct: 626 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 685
Query: 231 FNDMKQQQI 239
++ + +
Sbjct: 686 LRELCSRGV 694
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 113/255 (44%), Gaps = 10/255 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N +I LC+ G + A L++ + + NI YN ++ +D + ++
Sbjct: 425 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIV---TYNALVNGFCVQGRVDSALELFYS 481
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ T++ YT + + E++Q +++ N ++ F +
Sbjct: 482 MPCKPNTIT---YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 538
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A+ + + + C P+LITYN +LD + + + L + GV PD ++Y++
Sbjct: 539 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 598
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L + R++ + F + + G++P + Y ++ + + N + ++ F M
Sbjct: 599 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 658
Query: 239 IRPSIYVYRSLIDNL 253
P+ Y +LI+ L
Sbjct: 659 CMPNELTYITLIEGL 673
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ ++ L R GR +D + + +G D +YNTL+ + +LD
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLD---AA 163
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
R + + PD TYT +I G + E+L L +DM + +PS+ Y L++ + K
Sbjct: 164 RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 223
Query: 256 MGKVDLAMTIFEEMNS 271
AM + +EM +
Sbjct: 224 STGFGQAMEVLDEMRA 239
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 122/239 (51%), Gaps = 6/239 (2%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+A Y+ ++ A + ++ D+L ++ S Y N A + + Q L
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEV 235
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++ ++ N ++ A+ RQ KAL F+ +KG K +PD T+NI++ L +
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 151 VGRVNDMLNEFASM--KEAGVVPDFISYNTLLNNLRKIR-RLDLCLIYFREMGESGIKPD 207
+G+ + L+ F SM K A PD +++ +++ +L +R ++ C F M G+KP+
Sbjct: 296 LGQSSQALDVFNSMRDKRAECRPDVVTFTSIM-HLYSVRGEIENCRAVFEAMLAEGLKPN 354
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+++Y AL+ ++ G E +L +F D+K+ I P + Y SL+++ + + A +F
Sbjct: 355 IVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVF 413
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 77/141 (54%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ I+ ++ +IE +F+ + KP++++YN ++ G + L+ F
Sbjct: 320 VVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFG 379
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K G+VPD +SY +LLN+ + R+ F M + KP+++TY ALID++G G
Sbjct: 380 DIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 223 NIEESLRLFNDMKQQQIRPSI 243
+ E++ +F M+Q +P++
Sbjct: 440 FLAEAVEIFRQMEQDGTKPNV 460
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I A+ +++A +F ++ CKPD TY+ +++ GR G+ +N M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 165 KEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
A + P +YN L+N N R+ L++C ++M ++G+ PDL+T+ ++ ++
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWRQA--LEVC----KKMTDNGVGPDLVTHNIVLSAY 258
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++L F MK ++RP + +I L K+G+ A+ +F M
Sbjct: 259 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSM 309
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 116/264 (43%), Gaps = 3/264 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFL-PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
L K G S A+ + S+RDK P+ + ++ + +I+ + + +L
Sbjct: 293 LSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLK 352
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y A+ + L ++ + ++ ++ ++ +SRQ KA +
Sbjct: 353 PNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEV 412
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F ++ + KP+++TYN ++D G G + + + F M++ G P+ +S TLL +
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSR 472
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
++ GI + Y + I S+ +E+++ L+ M++++++
Sbjct: 473 SKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVT 532
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+ LI +M K A++ +EM
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEM 556
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 39/226 (17%)
Query: 91 IEEVVQIASPESI----IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI--- 143
+E V+ A I N I ++ + ++EKA+ ++ ++ K K D +T+ I
Sbjct: 479 VETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILIS 538
Query: 144 --------------------------------VLDILGRVGRVNDMLNEFASMKEAGVVP 171
VL + G+V + + F MK AG P
Sbjct: 539 GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKP 598
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y ++L+ + F EM +GI+PD + +AL+ +F + G L
Sbjct: 599 DVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLM 658
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ M+++++ + V+ + + + A+ + + M+ L L+
Sbjct: 659 DLMREKEVPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLS 704
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 88/222 (39%), Gaps = 35/222 (15%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ + +++E+ ++ P + V + ++ A++K Q+ +A IF+ +K CKPD+I Y +L
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSML 607
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ F M+ G+ PD I+ + L+ K + + M E +
Sbjct: 608 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVP 667
Query: 206 -------------PDLLTYTALIDS----------------------FGRTGNIEESLRL 230
L + ID FG++G +E ++L
Sbjct: 668 FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLYLFGKSGKVEAMMKL 727
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F + + + Y L+++L +G + + E M+ +
Sbjct: 728 FYKIIASGVEINFKTYAILLEHLLAVGNWRKYIEVLEWMSDA 769
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 121/307 (39%), Gaps = 40/307 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVA-SAETNDIDLSFQILKDLLV 61
N I A + A+ L Q++R K + + +L++ S + + LK++
Sbjct: 499 NSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S L+ + Y++ A+ T+ ++ +I ++ A+ S + K
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGK 618
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-----AGVVPDFISY 176
A +F ++ +PD I + ++ + G+ +++ M+E G V F
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGAV--FFEI 676
Query: 177 NTLLNNLRKIRR-LDLC------------------LIYFREMGE-------------SGI 204
+ N L++ +R +DL L F + G+ SG+
Sbjct: 677 FSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLYLFGKSGKVEAMMKLFYKIIASGV 736
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+ + TY L++ GN + + + M I+PS +YR +I ++ ++
Sbjct: 737 EINFKTYAILLEHLLAVGNWRKYIEVLEWMSDAGIQPSNQMYRDIISFGERSAGIEFEPL 796
Query: 265 IFEEMNS 271
I +++NS
Sbjct: 797 IRQKLNS 803
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 2/236 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ A + I+ D+L ++ S Y N A + + + L +++
Sbjct: 189 YNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 248
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ ++ N I+ AF Q KAL F+ +KG +PD T NIV+ L ++ + +
Sbjct: 249 ENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 308
Query: 156 DMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ F SM+E + PD +++ ++++ +++ C F M G+KP++++Y A
Sbjct: 309 KAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNA 368
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI ++ G E+ FN++KQ RP I Y SL++ + K A IF+ M
Sbjct: 369 LIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRM 424
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I A+ + ++A +F ++ +CKPD+ TYN +++ GR G+ +N M
Sbjct: 153 IYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDM 212
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
A + P +YN L+N L ++M E+G+ PDL+T+ ++ +F
Sbjct: 213 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQY 272
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
++L F MK IRP +I L K+ + D A+ IF M S+
Sbjct: 273 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSE 323
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 77/141 (54%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ II ++ Q+E F+ + KP++++YN ++ G N+ F
Sbjct: 328 VVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFN 387
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K+ G PD +SY +LLN + ++ F M + +KP+L++Y ALID++G G
Sbjct: 388 EIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNG 447
Query: 223 NIEESLRLFNDMKQQQIRPSI 243
+ +++++ +M+Q+ I+P++
Sbjct: 448 LLADAIKILREMEQEGIQPNV 468
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 70/254 (27%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E+ Q I+ ++ A+ +S++ KA IFD +K K KP+L++YN ++D
Sbjct: 384 LFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAY 443
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFIS--------------------------------- 175
G G + D + M++ G+ P+ +S
Sbjct: 444 GSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNT 503
Query: 176 --YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID----------------- 216
YN + + + D + ++ M + IK D +TYT LI
Sbjct: 504 VAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEE 563
Query: 217 ------------------SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
++ + G I E+ FN MK P + Y +++D
Sbjct: 564 IMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAEN 623
Query: 259 VDLAMTIFEEMNSS 272
+ A +FEEM +S
Sbjct: 624 WEKAYALFEEMEAS 637
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 78/205 (38%), Gaps = 35/205 (17%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN + + + D + + K + S YT + L F+EE+
Sbjct: 505 AYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEI 564
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ + P S V + I A++K QI +A F+ +K C PD++TY +LD
Sbjct: 565 MHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLD-------- 616
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+YN N + F EM S IK D + AL
Sbjct: 617 --------------------AYNAAEN-------WEKAYALFEEMEASSIKLDTIACAAL 649
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQI 239
+ SF + G L L M++++I
Sbjct: 650 MRSFNKGGQPGRVLSLAESMREKEI 674
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 73/152 (48%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ +KA+ ++ ++ K K D +TY +++ ++ + + L+ + + Y+
Sbjct: 518 EYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYS 577
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+ + K ++ F M SG PD++TYTA++D++ N E++ LF +M+
Sbjct: 578 SAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEAS 637
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+ +L+ + K G+ +++ E M
Sbjct: 638 SIKLDTIACAALMRSFNKGGQPGRVLSLAESM 669
>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 115/225 (51%), Gaps = 5/225 (2%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+D+S ++L D+ ++ +++ Y + I + ++ E++++ VN
Sbjct: 122 LDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNI 181
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMK 165
++ ++ +I++A + + ++ C PD+ITYN ++ L R V R +L E
Sbjct: 182 LMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNG 241
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
E PD +SY T+++ K +++ + F EM SG P+ T+ ALI FG+ G++
Sbjct: 242 E--FAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMA 299
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L L+ M Q P + + SLI+ ++G+V AM ++ +MN
Sbjct: 300 SALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMN 344
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 126/268 (47%), Gaps = 6/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+AG + A RLL LR LP+ YN ++ N++D + +LK++ ++
Sbjct: 183 MRGLCRAGEIDEAFRLLNDLRSFGC-LPDVITYNTLIHGLCRINEVDRARSLLKEVCLNG 241
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ D YT + + + E+++ + + N +I F K +
Sbjct: 242 E-FAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMAS 300
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL +++ + C PD+ T+ +++ R+G+V+ ++ + M + + +++ L++
Sbjct: 301 ALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVS 360
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L RL R + ES I P Y +ID + ++GN++E+ ++ +M+ + +P
Sbjct: 361 GLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKP 420
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LI G++ A+ IF +M
Sbjct: 421 DKLTFTILIIGHCMKGRMPEAIGIFHKM 448
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
S + + ++ + +S A +++D ++ PD ++ VGR++
Sbjct: 69 HSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSREL 128
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
A ++ V + + YN L N L + ++ ++ FRE+ KP T L+ R
Sbjct: 129 LADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCR 188
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G I+E+ RL ND++ P + Y +LI L ++ +VD A ++ +E+
Sbjct: 189 AGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEV 237
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC +S A + +++R+ + LPN YN ++ + + + ++ +++L
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGM-LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG 293
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + TD+ F+ ++ +I V N +I + K+ + +AL
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ I+ + PD+ TY+I++ L V R+ + MK+ G +P+ ++YNTL++
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + +M E GI+P+++T++ LID + + G +E ++ L+ +M + + P +
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LID K G A + +EM +
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 109/236 (46%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
A N VL + D +++ D++ + + Y D + +E
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+++ ++++ +I +I +A +F ++ P+L TYN ++D ++
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V L + M G++P+ +++ L++ L K + + +M G+ P++ Y
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LID + + GN+ E+L L +++++ +I P ++ Y LI L + +++ A + +EM
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
+ +++ +G V + L + M V+P + N +L+ L K R D + +M
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
G P+++TY LID R G+ ++ RLF++M +++I P++ +Y LI L ++
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 261 LAMTIFEEMNSS 272
A ++F M +S
Sbjct: 246 EAESMFRTMRNS 257
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 133/298 (44%), Gaps = 34/298 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC + A LLQ ++ K FLPNA YN ++ + +++ + ++ + +
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKG-FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM--TE 431
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + + T + +A M + ++ E V++ P+ ++ +I K
Sbjct: 432 KGIEPNIITFSTLIDGYCKAGKME---AAMGLYTEMVIKGLLPD-VVAYTALIDGHFKDG 487
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS-------------M 164
++A + ++ P++ T + ++D L + GR++D + F + +
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNEL 547
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ P+ + Y L+ L R+ +F +M SG++PD+ T +I R ++
Sbjct: 548 DRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHL 607
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN------SSLSDL 276
+ + L D+ + I P+ VYR L ++ G + A+ E+++ S+L+DL
Sbjct: 608 RDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCSNLNDL 665
>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
Length = 1070
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 131/271 (48%), Gaps = 3/271 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M N I +LC + + ++D + P+ YN + D + +L++
Sbjct: 477 MFNDLIHELCNMDRLEEGYGIFNQMKDLGL-TPSEFTYNSLFYGICRRKDPKAALDLLRE 535
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + T + + T+ + F++ ++QI I+ + + + +
Sbjct: 536 MQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGE 595
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ AL +F I PD++ +NI+++ + ++++ M E G+ P ++YN
Sbjct: 596 VDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNL 655
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K R++ + Y +M +P ++TYT+LID F G +E+++L+ +M+++
Sbjct: 656 MIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKG 715
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y + I+ L+K G+++ A+T FEEM
Sbjct: 716 CAPNNIAYTAFINGLRKCGRIETALTYFEEM 746
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 12/277 (4%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C +++LC +G V+ AV+ L + FLP+ Y+ + T ++D + + +D+
Sbjct: 548 CTEMVQQLCFSGRVTEAVQFLDGMLQIG-FLPDIVTYSAAMNGMCNTGEVDDALHLFRDI 606
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ F + + +EE+++ S++ N +I K+ +I
Sbjct: 607 SCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRI 666
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKA+ D + + +P +ITY ++D GR ++ + + M+E G P+ I+Y
Sbjct: 667 EKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAF 726
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N LRK R++ L YF EM G + D + I+ G + L ++ Q+
Sbjct: 727 INGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPMKGCELLKEVLQKD- 785
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ +NLK +G ++ A+ + + SD+
Sbjct: 786 --------TYGNNLKMVGLINEAVVELSKDGITSSDI 814
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 51/269 (18%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN VL +++ ++Q+L+ ++ + +++D I D
Sbjct: 389 YNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIRED------------- 435
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
A P S N ++ K ++++ AL + + L CK ++ +N ++ L + R+
Sbjct: 436 --AKPNSD-SFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLE 492
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG----IK------ 205
+ F MK+ G+ P +YN+L + + + L REM +G IK
Sbjct: 493 EGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMV 552
Query: 206 -------------------------PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
PD++TY+A ++ TG ++++L LF D+ +
Sbjct: 553 QQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYL 612
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + + LI+ +K K+D A I EEM
Sbjct: 613 PDVVAHNILINGFRKSSKLDEAQKIMEEM 641
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 26/276 (9%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL------ 60
L AG AVR + R PN+Y NC+L A A+ D + L++++
Sbjct: 148 LGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDG 207
Query: 61 -VSSRTLSS--DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
V TL+S CY N R DD + + E+ + V+ ++ AF+K
Sbjct: 208 SVDKYTLTSLLRCYCNAGRP----DDANDVFQRMSELGWVDEH----VLTTLMVAFSKWG 259
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ + ++ L + T ++++ + GRV+ ++ FA M G V D Y+
Sbjct: 260 KVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYS 319
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND---- 233
L+ L + + + + F+EM SG+ PD+ +I++F R G+ N+
Sbjct: 320 VLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEY 379
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+K + P +Y +++ L G+V+ A + M
Sbjct: 380 LKSGSVVP---LYNVVLEELVHCGEVEAAYQLLRSM 412
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 108/283 (38%), Gaps = 21/283 (7%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSRTLSSD 69
K G V AV LL S+ + L VLV + +D + + ++ +
Sbjct: 257 KWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLA 316
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK-ALLIFDH 128
Y+ D + + +E+ + ++ ++I AF + I ++
Sbjct: 317 MYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINEN 376
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV------------------ 170
+ LK + YN+VL+ L G V SM G
Sbjct: 377 AEYLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDA 436
Query: 171 -PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P+ S+N ++ L K+++LD+ L ++M G K +L + LI +EE
Sbjct: 437 KPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYG 496
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+FN MK + PS + Y SL + + A+ + EM ++
Sbjct: 497 IFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTN 539
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 120 EKALLIFDHIKG-LKCKPDLITYNIVLDILGRVGRVNDM---LNEFASMKEAGVVPDFIS 175
+ A+ FD + C P+ TYN +LD L + GR +D L E + G V D +
Sbjct: 155 DTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSV-DKYT 213
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+LL R D F+ M E G D T L+ +F + G ++ ++ L M+
Sbjct: 214 LTSLLRCYCNAGRPDDANDVFQRMSELGWV-DEHVLTTLMVAFSKWGKVDGAVELLGSME 272
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+R S L+ K G+VD AM +F +M S
Sbjct: 273 ALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVS 308
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 129/257 (50%), Gaps = 7/257 (2%)
Query: 18 AVRLLQSLRDKNIFLPNAYNCVLVASA----ETNDIDLSFQILKDLLVSSRTLSSDCYTN 73
AV L + + + L + +++ A E++D+ +++ D + L D Y
Sbjct: 339 AVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDL---CELVDDFIKKGGNLGFDMYIM 395
Query: 74 FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK 133
++F+ D ++ + ++V S+ N +I FAK+ ++E+AL ++
Sbjct: 396 IIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESG 455
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
P+L+T+N +++ ++G V+D + E G++PD I++ +L++ L +LD
Sbjct: 456 FSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAF 515
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
F EM E G++P++ TY LI G++ +++ L N MK I P Y + + I +
Sbjct: 516 NCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSF 575
Query: 254 KKMGKVDLAMTIFEEMN 270
+M K++ A +F +M+
Sbjct: 576 CRMRKIEKAQKLFNDMS 592
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 90 FIEEVVQIASPESIIVVNRIIFA------FAKSRQIEKAL---------------LIFDH 128
F+ +Q A+ E ++ V ++A FA+ R + +AL L+ D
Sbjct: 77 FVVRALQHAAGEPLLCVRLYVWASRFGQHFARDRSVRRALGDALLRRGPVVLSAALVAD- 135
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
++ C+ +++ GR+G + F + G+ P YN ++ +
Sbjct: 136 VRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGA 195
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+D + F++M G +PD TY L+ R G ++E+LRL M++ IRP++ Y
Sbjct: 196 VDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTM 255
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+D +V+ A+ + E M
Sbjct: 256 LVDGFCNASRVEEAVCVLERM 276
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F + L +P YN V+ R G V+ F M G PD +YNTL++ +
Sbjct: 167 VFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVC 226
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ +D L ++M +GI+P+++TYT L+D F +EE++ + MK++ + +
Sbjct: 227 RRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEA 286
Query: 245 VYRSLIDN 252
YRSL+
Sbjct: 287 TYRSLVHG 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+YN V+ A+ +++ + + +K + S + + + ++ + F++ V
Sbjct: 427 SYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMV 486
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
++ +I +I + Q++ A F + +P++ TYN+++ L G V
Sbjct: 487 MEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHV 546
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + MK G+ PD S+N + + ++R+++ F +M G+ PD TY AL
Sbjct: 547 SKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNAL 606
Query: 215 IDSFGRTGNIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
I + ++E+ + M+ I + Y ++ L KMG+ A +++
Sbjct: 607 IKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLHRKN 666
Query: 274 SDLA 277
+ L
Sbjct: 667 AHLG 670
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F++ V ++ S + N +I A ++ ++ A L F + C+PD TYN ++ +
Sbjct: 167 VFVQ-VPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGV 225
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G V++ L M+ AG+ P+ ++Y L++ R++ + M E G+
Sbjct: 226 CRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATE 285
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
TY +L+ R E + R+ ++ + Y +L+ L K
Sbjct: 286 ATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSK 332
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 5/280 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ LC G V A+ L + L +Y ++ + D + ++L+ +
Sbjct: 381 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG 440
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y+ A ++ E+ ++ + +I+ F ++++
Sbjct: 441 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKE 500
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + + PD+ TY I++D LG+ G+V + + A M +A V PD +YNTL+N
Sbjct: 501 AIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + F M G+ PD+ TYT LI+ F ++ ++E+L LF +M Q+ + P
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP 620
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
Y SL+D L K G++ + +EM D P D
Sbjct: 621 DTVTYSSLVDGLCKSGRISYVWDLIDEMR----DRGQPAD 656
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 143/301 (47%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CK G+ A++LL+ + D + PN Y+ ++ A + + ++ + ++ V
Sbjct: 419 INGVCKIGDTRGAIKLLRKI-DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG 477
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV----------------------QIASPE 101
+ Y+ F + + + + E+V ++ +
Sbjct: 478 ISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAK 537
Query: 102 SIIVV-------------NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
S++ V N ++ + +++KA +F+ + + PD+ TY I+++
Sbjct: 538 SVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 597
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ V++ LN F M + +VPD ++Y++L++ L K R+ EM + G D+
Sbjct: 598 CKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADV 657
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY +LID + G++++++ LFN MK Q IRP+ + + L+D L K G++ A +F++
Sbjct: 658 ITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQD 717
Query: 269 M 269
+
Sbjct: 718 L 718
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 91/161 (56%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F KS+ +++AL +F + PD +TY+ ++D L + GR++ + + M++ G
Sbjct: 593 LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG 652
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D I+YN+L++ L K LD + F +M + GI+P+ T+T L+D + G ++++
Sbjct: 653 QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 712
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F D+ + +Y+Y +I K G ++ A+T+ +M
Sbjct: 713 EVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKM 753
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N ++ K + S AV L L K I P+ + N ++ I F +L +L
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGI-QPDLFTLNILINCFCHMGQITFGFSVLAKIL 369
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S+ + + + L F ++++ + + +I K
Sbjct: 370 KRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 429
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + I G KP++ Y+ ++D L + V++ F+ M G+ D ++Y+TL+
Sbjct: 430 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 489
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +L + EM I PD+ TYT L+D+ G+ G ++E+ + M + ++
Sbjct: 490 YGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVK 549
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P ++ Y +L++ + +V A +F M+
Sbjct: 550 PDVFTYNTLMNGYLLVYEVKKAQHVFNAMS 579
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
DD L + + ++++ P + +N +I Q+++AL D + + + ++Y
Sbjct: 43 DDAVSLSV-LTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSY 101
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+++ + R+G + + P+ YNT+++ L K + + F EM
Sbjct: 102 ATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTV 161
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
GI +++TY+ LI F G ++E+L L N M + I P++ Y L+D L K GKV
Sbjct: 162 KGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKE 221
Query: 262 AMTIFEEM 269
A ++ M
Sbjct: 222 AKSVLAVM 229
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 118/268 (44%), Gaps = 2/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ LC G V A+ L + L +Y ++ D + + L+ +
Sbjct: 67 NTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDG 126
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y A ++ E+ +++ + +I+ F ++++
Sbjct: 127 RLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKE 186
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL + + + P++ TYNI++D L + G+V + + A M +A V + I+Y+TL++
Sbjct: 187 ALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMD 246
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + F M G+ PD+ +Y +I+ F + ++++L LF +M + P
Sbjct: 247 GYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF-P 305
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I + ++D+ KM A+++ +
Sbjct: 306 PIIQFNKILDSFAKMKHYSTAVSLSHRL 333
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E ++ P II N+I+ +FAK + A+ + ++ +PDL T NI+++
Sbjct: 295 LFKEMILSRFPP--IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCF 352
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+G++ + A + + G P ++ NTL+ L ++ L + ++ G + +
Sbjct: 353 CHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 412
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++Y LI+ + G+ +++L + + +P++ +Y ++ID L K V A +F E
Sbjct: 413 VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 472
Query: 269 MN 270
M
Sbjct: 473 MT 474
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 115/268 (42%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAA----VRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
++ L K G V A +L++ ++F YN ++ ++ + + + +
Sbjct: 524 VDALGKEGKVKEAKSVLAVMLKACVKPDVF---TYNTLMNGYLLVYEVKKAQHVFNAMSL 580
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T YT F + + L +E+ Q + + ++ KS +I
Sbjct: 581 MGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISY 640
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D ++ D+ITYN ++D L + G ++ + F MK+ G+ P+ ++ LL+
Sbjct: 641 VWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLD 700
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K RL F+++ G D+ Y +I + G +EE+L + + M++ P
Sbjct: 701 GLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIP 760
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + +I+ L K + D A + +M
Sbjct: 761 NAVTFDIIINALFKKDENDKAEKLLRQM 788
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 106/234 (45%), Gaps = 7/234 (2%)
Query: 3 NGY--IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
NGY + ++ KA +V A+ L+ D + Y ++ ++ +D + + K++
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPD-----VHTYTILINGFCKSKMVDEALNLFKEMH 614
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y++ + + + I+E+ P +I N +I K+ ++
Sbjct: 615 QKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLD 674
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ +F+ +K +P+ T+ I+LD L + GR+ D F + G D YN ++
Sbjct: 675 KAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMI 734
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
K L+ L +M E+G P+ +T+ +I++ + +++ +L M
Sbjct: 735 YGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
I G KP++ YN ++D L + V++ F+ M G+ + ++Y+TL+ + +
Sbjct: 124 IDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGK 183
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L L M I P++ TY L+D+ + G ++E+ + M + ++ ++ Y +
Sbjct: 184 LKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYST 243
Query: 249 LIDNLKKMGKVDLAMTIFEEMN 270
L+D + +V A +F M+
Sbjct: 244 LMDGYFLVYEVKKAQHVFNAMS 265
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 127/267 (47%), Gaps = 9/267 (3%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G AV LL+ + + P+A +N + A ++ + ++LK++ ++ L
Sbjct: 367 KGGQWEKAVELLREVTALGL-TPDATSFNSAIAACTKSGRWKEALELLKEM--PAKRLKP 423
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIAS---PESIIVVNRIIFAFAKSRQIEKALLI 125
D + + A Q + +E Q+ + ++I N I A + + ++ L +
Sbjct: 424 DAIS-YNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLEL 482
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ P++ITYN + G+ G+ L+ A MKE + PD I+YN+ + K
Sbjct: 483 LRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSK 542
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
R + REM G+ PD+++YTA ID++G+ G E ++ L M + + P++
Sbjct: 543 RGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVIT 602
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y S+I + G+ + A+ + +E+ +
Sbjct: 603 YNSVIKACGRGGEWEKALDLLKELKET 629
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 125/271 (46%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I K+G A+ LL+ + K + P+A YN + A + +++ ++ + +
Sbjct: 394 NSAIAACTKSGRWKEALELLKEMPAKRLK-PDAISYNSAIEACGKGGQWEMALELRRQM- 451
Query: 61 VSSRTLSSDC-YTNFA-RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ L+ + +N A RA + L + ++ ++I N I K Q
Sbjct: 452 -PTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQ 510
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
EKAL + +K L PD ITYN + + GR + + M G+ PD ISY
Sbjct: 511 WEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTA 570
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ K + + + R+M G+ P+++TY ++I + GR G E++L L ++K+
Sbjct: 571 AIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETA 630
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P + Y I K G+ + A+ + EM
Sbjct: 631 VAPDLMSYNLAISACGKRGRWEEALDLLREM 661
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 3/259 (1%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + LL+ + + + PN YN + + + + +L + + T S
Sbjct: 474 GRWQEGLELLRQMPAQGL-TPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSIT 532
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + A + + + E+ +I I A+ K+ Q E+A+ + +
Sbjct: 533 YNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMP 592
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P++ITYN V+ GR G L+ +KE V PD +SYN ++ K R +
Sbjct: 593 TKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWE 652
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L REM G+ PD+++YT+ I + G E++L L N M + P+ Y I
Sbjct: 653 EALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAI 712
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+ K G+ + A+ + EM
Sbjct: 713 EACGKGGRREEAVCLVREM 731
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N IE K G A+ L + + K + PN + N + A E ++L+ +
Sbjct: 429 NSAIEACGKGGQWEMALELRRQMPTKGL-TPNVISSNIAIRACGERGRWQEGLELLRQMP 487
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y + + + L + ++ ++A I N I A +K + +
Sbjct: 488 AQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWK 547
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + G PD+I+Y +D G+ G+ + M G+ P+ I+YN+++
Sbjct: 548 EAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVI 607
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + L +E+ E+ + PDL++Y I + G+ G EE+L L +M + +
Sbjct: 608 KACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLT 667
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y S I G+ + A+ + M +
Sbjct: 668 PDVISYTSAIRACNAEGEWEKALGLLNLMGA 698
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD--C 70
G A+ +L +++ + ++Y + + + ++L+++ +S + C
Sbjct: 124 GKWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREI-PEQEGVSPNVFC 182
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESI---IVVNRIIFAFAKSRQIEKALLIFD 127
Y + A D Q I + + ++A E + I N I A + Q E+ + +
Sbjct: 183 YNSAIEACGSGD---QWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLR 239
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ + PD ITYN V+ G+ G+ + L+ M G+ P+ ISYN + +
Sbjct: 240 EMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSG 299
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R + R+M G+ PD+++Y A I + G G E S+ L ++M + + P+ +
Sbjct: 300 RWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFN 359
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
S I K G+ + A+ + E+ +
Sbjct: 360 SAIVACGKGGQWEKAVELLREVTA 383
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 122/298 (40%), Gaps = 41/298 (13%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+ G A+ LL+ + ++ PN YN + A + +++ +L+++ + R +
Sbjct: 156 RQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREM--ADREVVP 213
Query: 69 D--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
D Y + +A +++ + E+ + I N +I K Q ++AL +
Sbjct: 214 DEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVL 273
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF------------- 173
+ P+ I+YN+ + GR GR + + M+ GV PD
Sbjct: 274 TEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGG 333
Query: 174 ----------------------ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
I +N+ + K + + + RE+ G+ PD ++
Sbjct: 334 GQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSF 393
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I + ++G +E+L L +M ++++P Y S I+ K G+ ++A+ + +M
Sbjct: 394 NSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQM 451
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 107/269 (39%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ + G + LL+ + + P+A YN V+ + + +L ++
Sbjct: 219 NSAIKACGRGGQWERVIGLLREMPSVGL-TPDAITYNSVITGCGKEGQWKEALSVLTEMS 277
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y RA + + + + ++ +I + I A Q E
Sbjct: 278 AKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWE 337
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++ + D + G P+ I +N + G+ G+ + + G+ PD S+N+ +
Sbjct: 338 TSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAI 397
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K R L +EM +KPD ++Y + I++ G+ G E +L L M + +
Sbjct: 398 AACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLT 457
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ I + G+ + + +M
Sbjct: 458 PNVISSNIAIRACGERGRWQEGLELLRQM 486
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 89/219 (40%), Gaps = 3/219 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I K G AV LL+ + + + P+ +Y + A + + + ++L+ +
Sbjct: 534 NSAIAACSKRGRWKEAVALLREMPGQGL-TPDVISYTAAIDAYGKNGQWERAVELLRQMP 592
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y + +A + + L ++E+ + A ++ N I A K + E
Sbjct: 593 TKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWE 652
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + PD+I+Y + G L M GV P SY+ +
Sbjct: 653 EALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAI 712
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
K R + + REM + G+ ++ + ++++ G
Sbjct: 713 EACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALG 751
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK N A+RL Q + + + +P+ + ++ + ++ + + +++
Sbjct: 256 NTLMDGYCKLANAKQALRLYQDMLGEGL-VPDVVTFGILIDGLCKFGEMKAARNLFVNMI 314
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T + Y + A+ D ++ + E+ + + + +I + E
Sbjct: 315 KFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTE 374
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IF+ + + +TYN ++D + G+++ L + M E GV P+ I+++TL+
Sbjct: 375 EAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLI 434
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ KIR L + + EM + PD++TYTA+ID + G+++E+L+L++DM I
Sbjct: 435 DGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGIT 494
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
P+ Y L+D L K GK+ A+ +F E
Sbjct: 495 PNCYTISCLLDGLCKDGKISDALELFTE 522
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 142/273 (52%), Gaps = 17/273 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC + A + +++R+ ++ PN YN ++ + + + ++ +D+L
Sbjct: 224 IRGLCSDNKIEEAESMHRAMREVGVY-PNVYTYNTLMDGYCKLANAKQALRLYQDML--G 280
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-------IFIEEVVQIASPESIIVVNRIIFAFAKS 116
L D T F I+ D + +F+ +++ + +I V N +I A+ K
Sbjct: 281 EGLVPDVVT-FG---ILIDGLCKFGEMKAARNLFVN-MIKFSVTPNIAVYNSLIDAYCKV 335
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +A+ +F ++ + PD+ TY+I++ L V R + N F M + G++ + ++Y
Sbjct: 336 GDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTY 395
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L++ K ++D L +M E+G++P+++T++ LID + + N++ ++ ++++M
Sbjct: 396 NSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVI 455
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + P + Y ++ID K G + A+ ++ +M
Sbjct: 456 KSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDM 488
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 93/178 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
EE++ S+I +I + + +A +FD ++ P +I Y I++ L
Sbjct: 171 EEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSD 230
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
++ + + +M+E GV P+ +YNTL++ K+ L +++M G+ PD++T+
Sbjct: 231 NKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTF 290
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LID + G ++ + LF +M + + P+I VY SLID K+G V AM +F E+
Sbjct: 291 GILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLEL 348
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
++ ++ N ++ + K ++AL ++ + G PD++T+ I++D L + G +
Sbjct: 245 EVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMK 304
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
N F +M + V P+ YN+L++ K+ + + F E+ + PD+ TY+ LI
Sbjct: 305 AARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILI 364
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
EE+ +F M ++ I + Y SLID K GK+D A+ I +M
Sbjct: 365 RGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMT 419
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 117/268 (43%), Gaps = 20/268 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N I+ CK G+VS A+ L L ++F Y+ ++ + + + I +
Sbjct: 326 NSLIDAYCKVGDVSEAMALFLELERFEVSPDVF---TYSILIRGLCSVSRTEEAGNIFEK 382
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ +S Y + + L ++ + ++I + +I + K R
Sbjct: 383 MTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRN 442
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ A+ I+ + PD++TY ++D + G + + L ++ M + G+ P+ + +
Sbjct: 443 LQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISC 502
Query: 179 LLNNLRKIRRLDLCLIYFREMGE----------SGIKPDL---LTYTALIDSFGRTGNIE 225
LL+ L K ++ L F E E G KP L + YTALI + G
Sbjct: 503 LLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFS 562
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
++++LF+DM++ ++P +Y ++ L
Sbjct: 563 KAVKLFSDMRRYGLQPDEVIYVVMLRGL 590
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+C I L + + A++++ L + AYN ++ N ID ++Q+L +
Sbjct: 94 LCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRM- 152
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAK 115
++ S D T ++ C++ ++ F ++++ +++ +I A
Sbjct: 153 -KNKGFSPDIVT---YNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLL 208
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
I++A+ + D + + +PD+ TYN ++ + R G V+ +S+ G PD I+
Sbjct: 209 QGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVIT 268
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN LL L + + +M G + +++TY+ LI S R G +EE + L DMK
Sbjct: 269 YNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMK 328
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ ++P Y Y LI L K G+VDLA+ + + M
Sbjct: 329 KKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L F+ +V +++ ++I S+ I+KA+ + HI PDLI YN ++
Sbjct: 77 LYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVM-HILENHGHPDLIAYNAIITG 135
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
R R++ MK G PD ++YN L+ +L LD L + ++ + KP
Sbjct: 136 FCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPT 195
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++TYT LI++ G I+E+++L ++M + ++P ++ Y S+I + + G VD A I
Sbjct: 196 VVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIIS 255
Query: 268 EMNS 271
++S
Sbjct: 256 SISS 259
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
IE G + A++LL + + N+ P+ YN ++ +D +FQI+ +SS
Sbjct: 203 IEATLLQGGIDEAMKLLDEMLEINL-QPDMFTYNSIIRGMCREGYVDRAFQIISS--ISS 259
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + D Y R + + ++V +++ + +I + + ++E+
Sbjct: 260 KGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEE 319
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ + +K KPD Y+ ++ L + GRV+ + M G VPD ++YNT+L
Sbjct: 320 GVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILA 379
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K +R D L F ++GE G P+ +Y ++ + TG+ +L + +M + + P
Sbjct: 380 CLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDP 439
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI L + G VD A+ + +M
Sbjct: 440 DGITYNSLISCLCRDGMVDEAIELLVDM 467
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 127/270 (47%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+A + +A ++L +++K F P+ YN ++ + +D + + LL
Sbjct: 130 NAIITGFCRANRIDSAYQVLDRMKNKG-FSPDIVTYNILIGSLCSRGMLDSALEFKNQLL 188
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT A ++ + + ++E+++I + N II + ++
Sbjct: 189 KENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVD 248
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I I PD+ITYNI+L L G+ + M G + ++Y+ L+
Sbjct: 249 RAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLI 308
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+++ + +++ + ++M + G+KPD Y LI + + G ++ ++ + + M
Sbjct: 309 SSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCV 368
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P I Y +++ L K + D A++IFE++
Sbjct: 369 PDIVNYNTILACLCKQKRADEALSIFEKLG 398
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 44/268 (16%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
I +C+ G V V LL+ ++ K + P+ Y + ++ A + +DL+ ++L D+++S
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGL-KPDGYCYDPLIAALCKEGRVDLAIEVL-DVMIS- 364
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
D C P+ I+ N I+ K ++ ++AL
Sbjct: 365 ------------------DGCV--------------PD-IVNYNTILACLCKQKRADEAL 391
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + + C P+ +YN + L G L M + GV PD I+YN+L++ L
Sbjct: 392 SIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCL 451
Query: 184 RKIRRLD--LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ +D + L+ EM S KP +++Y ++ + + +++ + M + RP
Sbjct: 452 CRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRP 511
Query: 242 SIYVYRSLIDNLKKMGKV----DLAMTI 265
+ Y LI+ + G + DLA T+
Sbjct: 512 NETTYTFLIEGIGFGGCLNDARDLATTL 539
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
+C I LC+ G S A R+L++ R AYN ++ +D + +++ +
Sbjct: 80 LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM 139
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V+ + YT R + L +++++ S++ ++ A KS
Sbjct: 140 PVAPDAYT---YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGF 196
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A+ + D ++ C P+++TYN++++ + R GRV+D + G PD +SY T+
Sbjct: 197 GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTV 256
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L L +R + F EM E P+ +T+ L+ F R G +E ++++ M
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + +I+ + K G+VD A M S
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E +CK+ A+ +L +R K PN YN ++ +D + + L L SS
Sbjct: 187 LEAVCKSTGFGQAMEVLDEMRAKGC-TPNIVTYNVIINGMCREGRVDDAREFLNRL--SS 243
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
D YT + + E+++ + + + ++ F + +E+
Sbjct: 244 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + + G C + NIV++ + + GRV+D +M G PD ISY T+L
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R + +EM P+ +T+ I + G IE++ L M +
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I Y +L++ G+VD A+ +F M
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSM 451
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 133/306 (43%), Gaps = 35/306 (11%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN I +CK G V A + L ++ P+ +Y VL + + ++LK+
Sbjct: 322 LCNIVINTICKQGRVDDAFQFLNNMGSYGCS-PDTISYTTVLKGLCRAERWEDAKELLKE 380
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + + + F Q + IE++ + +I+ N ++ F +
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440
Query: 119 IEKALLIFDH-------------IKGL-------------------KCKPDLITYNIVLD 146
++ AL +F + GL C P+++T+N+++
Sbjct: 441 VDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 500
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G +++ + M E G P+ I+YNTLL+ + K + L + +G+ P
Sbjct: 501 FFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSP 560
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D++TY+++I R +EE++++F+ ++ +RP +Y ++ L K D A+ F
Sbjct: 561 DIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFF 620
Query: 267 EEMNSS 272
M S+
Sbjct: 621 AYMVSN 626
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 119/305 (39%), Gaps = 41/305 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLL 60
N + C+ G + AA RL+ S+ P+AY ++ + + + +L D+L
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 172
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S YT A + Q + ++E+ +I+ N II + +++
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY---- 176
A + + +PD ++Y VL L R D+ FA M E +P+ +++
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292
Query: 177 -------------------------------NTLLNNLRKIRRLDLCLIYFREMGESGIK 205
N ++N + K R+D + MG G
Sbjct: 293 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 352
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD ++YT ++ R E++ L +M ++ P+ + + I L + G ++ A +
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412
Query: 266 FEEMN 270
E+M+
Sbjct: 413 IEQMS 417
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 26/249 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + C G V +A+ L S+ K PN Y +L +D + ++L ++L
Sbjct: 429 NALVNGFCVQGRVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAEML 484
Query: 61 VSSRTLSSDCYTN----------FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
DC N F + +M D+ +L +E++++ ++I N ++
Sbjct: 485 ------QKDCAPNVVTFNVLVSFFCQKGLM-DEAIEL---VEQMMEHGCTPNLITYNTLL 534
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K E+AL + + PD++TY+ ++ +L R RV + + F +++ G+
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P + YN +L L K D + +F M +G P+ LTY LI+ ++E+ L
Sbjct: 595 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 654
Query: 231 FNDMKQQQI 239
++ + +
Sbjct: 655 LRELCSRGV 663
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 113/255 (44%), Gaps = 10/255 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N +I LC+ G + A L++ + + NI YN ++ +D + ++
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIV---TYNALVNGFCVQGRVDSALELFYS 450
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ T++ YT + + E++Q +++ N ++ F +
Sbjct: 451 MPCKPNTIT---YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A+ + + + C P+LITYN +LD + + + L + GV PD ++Y++
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 567
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L + R++ + F + + G++P + Y ++ + + N + ++ F M
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627
Query: 239 IRPSIYVYRSLIDNL 253
P+ Y +LI+ L
Sbjct: 628 CMPNELTYITLIEGL 642
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ ++ L R GR +D + + +G D +YNTL+ + +LD
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLD---AA 132
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
R + + PD TYT +I G + E+L L +DM + +PS+ Y L++ + K
Sbjct: 133 RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192
Query: 256 MGKVDLAMTIFEEMNS 271
AM + +EM +
Sbjct: 193 STGFGQAMEVLDEMRA 208
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 104/193 (53%)
Query: 77 AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP 136
F + ++ + ++++V++ + ++ + + +A+ + + + C+P
Sbjct: 144 GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP 203
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
DL+TY V++ L + G + LN M++ + D + Y+T++++L K R +D L F
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM GI+PD+ TY++LI G ++ RL +DM +++I P++ + SLID K
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 257 GKVDLAMTIFEEM 269
GK+ A +F+EM
Sbjct: 324 GKLIEAEKLFDEM 336
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 129/263 (49%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLS--FQILKDLLVSS 63
I+ LCK +V A+ L + +K I P+ + + S N S ++L D+L
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + + AF + +E++Q + +I+ N +I F ++++A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF + C PD++TYN +++ + +V D + F M G+V + ++Y TL++
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ D + F++M G+ P+++TY L+D + G +E+++ +F +++ ++ P I
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
Y Y + + + K GKV+ +F
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLF 508
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILK------- 57
I LCK G A+ LL + I Y+ V+ + + +D + +
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 58 --DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
D+ S +S C N+ R D ++LL ++++ +++ N +I AFAK
Sbjct: 272 RPDVFTYSSLIS--CLCNYGR----WSDASRLL---SDMLERKINPNVVTFNSLIDAFAK 322
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A +FD + P+++TYN +++ R+++ F M +PD ++
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNTL+N K +++ + FR+M G+ + +TYT LI F + + + + +F M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P+I Y +L+D L K GK++ AM +FE + S
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 4/260 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C + A ++ + K+ LP+ YN ++ + + ++ +D+
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDC-LPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT F DC + +++V +I+ N ++ K+ ++E
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+++F++++ K +PD+ TYNI+ + + + G+V D + F S+ GV PD I+YNT++
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + F +M E G PD TY LI + R G+ S L +M+ +
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFA 587
Query: 241 PSIYVYRSLIDNLKKMGKVD 260
Y L+ ++ G++D
Sbjct: 588 GDASTY-GLVTDMLHDGRLD 606
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ +S A+ +L + K + P+ N +L N I + ++ ++
Sbjct: 107 INCLCRRSQLSFALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ +T + ++ + +E +V ++ +I K + + AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + ++ K + D++ Y+ V+D L + V+D LN F M G+ PD +Y++L++ L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R +M E I P+++T+ +LID+F + G + E+ +LF++M Q+ I P+I
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y SLI+ ++D A IF M S
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F E++ + ++ N +I + Q+ AL I + L P ++T N +L+
Sbjct: 87 FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC 146
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+++ + M E G PD +++ TL++ L + + + M G +PDL+
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY A+I+ + G + +L L N M++ +I + +Y ++ID+L K VD A+ +F EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 270 NS 271
++
Sbjct: 267 DN 268
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 5/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G + A +L + ++I PN YN ++ + +D + QI L+
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSID-PNIVTYNSLINGFCMHDRLDEAQQIFT-LM 371
Query: 61 VSSRTLSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
VS L Y F + ++ + + + +I F ++
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A ++F + P+++TYN +LD L + G++ + F ++++ + PD +YN +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ K +++ F + G+KPD++ Y +I F + G EE+ LF MK+
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P Y +LI + G + + +EM S
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+V+ SI+ ++++ A AK ++ + + + ++ L +L TYNI+++ L R
Sbjct: 55 EMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRS 114
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+++ L M + G P ++ N+LLN R+ + +M E G +PD +T+T
Sbjct: 115 QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 174
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+ + E++ L M + +P + Y ++I+ L K G+ DLA+ + +M
Sbjct: 175 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 59/117 (50%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++++ ++ F M ++ P + ++ LL+ + K+++ DL + + +M G+ +L TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I+ R + +L + M + PSI SL++ ++ A+ + ++M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
>gi|302810470|ref|XP_002986926.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
gi|300145331|gb|EFJ12008.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
Length = 458
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 26/279 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDID----LSFQILKDL 59
I+ C G +S A LL + + I PN YN +L A A+ +D L+ Q+L+
Sbjct: 135 IKSCCDCGQLSRAADLLADMTARGI-QPNRVTYNIILDAYAKCGSLDKLHDLALQMLQSP 193
Query: 60 LVSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S R D ++ A + F D ++ + + + + + ++ ++ A+AK+
Sbjct: 194 SPSCR---PDHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAAYAKAE 250
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+K + +I + D +TYNI+++ GR GR ML F SMK GV PD ++Y
Sbjct: 251 MFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVTYC 310
Query: 178 TLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
TL+N RK+ RL +M ++PD Y +++D++ R +I R F
Sbjct: 311 TLINFYGKFGMQRKLPRL------LEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYF 364
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA--MTIFEE 268
M++Q +P Y LI + G D A M + +E
Sbjct: 365 AAMQEQGCKPDHLTYNILIQAYRSQGLTDKADVMAVEQE 403
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 11/273 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQS-LRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+E L K A L Q+ L D A+ ++ A +N + + ++L+ + +
Sbjct: 64 LEMLGKCKRPDEAASLFQTMLADGCGPSREAFTALMSAYTRSNLMSTAMEVLQAMNATPH 123
Query: 65 TLSSDCYTNFARAFIMTDDCTQL---LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S D +T ++ DC QL + ++ + + N I+ A+AK ++K
Sbjct: 124 C-SPDVFT-YSLLIKSCCDCGQLSRAADLLADMTARGIQPNRVTYNIILDAYAKCGSLDK 181
Query: 122 ----ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
AL + C+PD + N ++ G G + M F + PD ++ +
Sbjct: 182 LHDLALQMLQS-PSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLH 240
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L+ K D R + + D +TY LI+++GR G + L+ F MK
Sbjct: 241 SLMAAYAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCG 300
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RP Y +LI+ K G + E+M+
Sbjct: 301 GVRPDSVTYCTLINFYGKFGMQRKLPRLLEQMS 333
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 118 QIEKALLIFDHIKGLKC-KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
Q E AL +F+ ++ + +P TY +L++LG+ R ++ + F +M G P ++
Sbjct: 36 QWEAALKVFELLRSQQWYQPYAGTYIRMLEMLGKCKRPDEAASLFQTMLADGCGPSREAF 95
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGES-GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
L++ + + + + M + PD+ TY+ LI S G + + L DM
Sbjct: 96 TALMSAYTRSNLMSTAMEVLQAMNATPHCSPDVFTYSLLIKSCCDCGQLSRAADLLADMT 155
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKA 286
+ I+P+ Y ++D K G +D + +M S S P + R A
Sbjct: 156 ARGIQPNRVTYNIILDAYAKCGSLDKLHDLALQMLQSPSPSCRPDHWSRNA 206
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 97/183 (53%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
LL+F + +S +I N ++ + RQ E + I + + +PD ITY+ ++
Sbjct: 27 LLLFRWLRAEHSSSLNIYTYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYSTLIS 86
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
R + + F M EAG VPD ++Y+T+++ K+ + D + + + ++G KP
Sbjct: 87 CANRCNYQDAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKP 146
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D +TY ++ FGR G I ++ +F +MK ++P VY +I L + G++ A+ +F
Sbjct: 147 DKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVF 206
Query: 267 EEM 269
EEM
Sbjct: 207 EEM 209
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 88/155 (56%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A+ FD + C PD++TY+ ++D+ G++G+ ++ + + +K+AG PD ++Y T+
Sbjct: 95 DAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTM 154
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + + + F EM SG++PD + Y +I GR G + +L++F +M+++ +
Sbjct: 155 VRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGV 214
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+P+ ++++ + G V + +F+ + ++
Sbjct: 215 KPNAVTLSTVMETYSRCGNVMEGLEVFQRLRQGVA 249
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 4/180 (2%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ + +I + K + ++A+ +++ +K KPD +TY ++ + GR G + ++ F
Sbjct: 113 VVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFE 172
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
MK +GV PD I YN ++ L + R+ L F EM G+KP+ +T + +++++ R G
Sbjct: 173 EMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTVMETYSRCG 232
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
N+ E L +F ++ Q + + VY +++ ++ G A EM S P D+
Sbjct: 233 NVMEGLEVFQRLR-QGVACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQ---PNDW 288
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 87/220 (39%), Gaps = 34/220 (15%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ + E V Q + ++ F ++ I A+ IF+ +KG +PD I YNI++
Sbjct: 131 EAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMI 190
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVP---------------------------------- 171
LGR GR+ L F M+ GV P
Sbjct: 191 ACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTVMETYSRCGNVMEGLEVFQRLRQGVAC 250
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I YN +L R+ Y REM ESG +P+ TY +I + + G E+ R F
Sbjct: 251 DVIVYNAVLKMCREAGLASEAEQYLREMTESGHQPNDWTYRNMISVYAKKGMAVEAHRTF 310
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M + + + Y SL+ + + I +EM S
Sbjct: 311 SQMVEAGYQIDVMAYTSLLQAYGNAKEYNKVQEILDEMTS 350
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN +L LR+ R+ + +M + ++PD +TY+ LI R + ++ F+ M
Sbjct: 45 TYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAWFDRM 104
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P + Y ++ID KMGK D A+ ++E + +
Sbjct: 105 HEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQA 142
>gi|302759424|ref|XP_002963135.1| hypothetical protein SELMODRAFT_62209 [Selaginella moellendorffii]
gi|300169996|gb|EFJ36598.1| hypothetical protein SELMODRAFT_62209 [Selaginella moellendorffii]
Length = 400
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 8/256 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
+ +GYI K NV+ A RL + ++ LP +N + A+ ++D + + +
Sbjct: 150 LIDGYI----KCHNVTGATRLFLEMLERGC-LPGEEIFNLLFGLHAKAGELDEAVNLFRK 204
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + + Y F M ++ F E++ S + N ++ +K+ +
Sbjct: 205 IAENGCQPTVKSYGMLLDTFAMVNNLEGAHAFYMELIGKNIYPSSVSCNSLLSRLSKAGK 264
Query: 119 IEKALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
AL F +K KP+ ITYNI +D+ G+ + + EF MK G P ++YN
Sbjct: 265 TTLALTFFREMKSFPGTKPNGITYNIAIDLFGKTAKFAEAWEEFLDMKRNGCSPSVVTYN 324
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL+ L + ++LC + EM E GI + TY LID R +E +L ++MK+
Sbjct: 325 TLIVRLGRGGYIELCFDLYEEMRERGITANQFTYCGLIDVLTRYNQVEHALEFLDEMKRL 384
Query: 238 QIRPSIYVYRSLIDNL 253
PS + +I +L
Sbjct: 385 HFHPSFNTLQLVIKSL 400
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+P+S V N +I + +++A+ +F +K K DL TY I++D + V
Sbjct: 107 APDSY-VYNAVISSLCNVANMDEAMKVFSKMKD-KSTIDLFTYTILIDGYIKCHNVTGAT 164
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M E G +P +N L K LD + FR++ E+G +P + +Y L+D+F
Sbjct: 165 RLFLEMLERGCLPGEEIFNLLFGLHAKAGELDEAVNLFRKIAENGCQPTVKSYGMLLDTF 224
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
N+E + + ++ + I PS SL+ L K GK LA+T F EM S
Sbjct: 225 AMVNNLEGAHAFYMELIGKNIYPSSVSCNSLLSRLSKAGKTTLALTFFREMKS 277
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC N+ A+++ ++DK+ Y ++ + +++ + ++ ++L
Sbjct: 114 NAVISSLCNVANMDEAMKVFSKMKDKSTIDLFTYTILIDGYIKCHNVTGATRLFLEMLER 173
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + + + + ++ + ++ ++ FA +E A
Sbjct: 174 GCLPGEEIFNLLFGLHAKAGELDEAVNLFRKIAENGCQPTVKSYGMLLDTFAMVNNLEGA 233
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLN 181
+ + G P ++ N +L L + G+ L F MK G P+ I+YN ++
Sbjct: 234 HAFYMELIGKNIYPSSVSCNSLLSRLSKAGKTTLALTFFREMKSFPGTKPNGITYNIAID 293
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K + F +M +G P ++TY LI GR G IE L+ +M+++ I
Sbjct: 294 LFGKTAKFAEAWEEFLDMKRNGCSPSVVTYNTLIVRLGRGGYIELCFDLYEEMRERGITA 353
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + Y LID L + +V+ A+ +EM
Sbjct: 354 NQFTYCGLIDVLTRYNQVEHALEFLDEM 381
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
T I+L L + G V D L F+ M+ + P F Y +++ + + + + ++ +
Sbjct: 42 TSKILLVSLFKGGYVEDALEVFSQMERSSSPPGFNEYKYVIDRMLRSECYLVVPVLYKGL 101
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+G PD Y A+I S N++E++++F+ MK + ++ Y LID K V
Sbjct: 102 MTAGHAPDSYVYNAVISSLCNVANMDEAMKVFSKMKDKST-IDLFTYTILIDGYIKCHNV 160
Query: 260 DLAMTIFEEM 269
A +F EM
Sbjct: 161 TGATRLFLEM 170
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 130/267 (48%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ +CK G++ A +L + + PN YN VL + + ++L ++ +
Sbjct: 302 LDGVCKEGHLEVAHEILDRMPSYGL-KPNVVCYNTVLKGLCSAERWEQAEELLAEMFDND 360
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + F +++ +E++++ +I +I F K I++A+
Sbjct: 361 CPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAV 420
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + C+P+ I+Y IVL L R D + + M E G P+ +++NT++N L
Sbjct: 421 MLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFL 480
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + ++M +G PDL++Y+ +ID G+ G +E+L L N M + + P+
Sbjct: 481 CKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 540
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+Y S+ L K G+++ + +F+ +
Sbjct: 541 IIYSSIASALSKEGRINRVIQMFDNIQ 567
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 7/260 (2%)
Query: 17 AAVRLLQSLRDKNIFLPNAYNCVLVASA---ETNDIDLSFQILKDLLVSSRTLSSDC--Y 71
+AVR+LQ L + L + NC LV +A + +D + ++L+DL +S D Y
Sbjct: 171 SAVRVLQDLHGRGCAL-DVGNCNLVLNAVCDQGGSVDEALRLLRDL-PTSFGCDPDVVSY 228
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
+ M ++ +EE+V++ P +++ N +I ++ E+ + +
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
C PD+ Y VLD + + G + M G+ P+ + YNT+L L R +
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
EM ++ D +T+ L+D F + G + + L M + P + Y ++I+
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408
Query: 252 NLKKMGKVDLAMTIFEEMNS 271
K G +D A+ + + M +
Sbjct: 409 GFCKEGLIDEAVMLLKSMAA 428
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + + +P+ Y V+ + ID + +LK +
Sbjct: 372 VDFFCQNGLVYRVIELLEQMLEHGC-VPDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + + ++++ + + N +I K +E+A+
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAI 490
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ ++ L M G+ P+ I Y+++ + L
Sbjct: 491 ELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 550
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R++ + F + + I+ D + Y A+I S + G + ++ M P+
Sbjct: 551 SKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNE 610
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G V A + E+ S
Sbjct: 611 STYTILIRGLASEGFVKEAQEMLTELCS 638
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 44/275 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N + C+AG +++A RL S+ PNAY F +++ L
Sbjct: 87 NAMVSGYCRAGQLASARRLAASVP----VPPNAYT--------------YFPVVRALCAR 128
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ---- 118
R A A + D+ ++ I + +I A SR
Sbjct: 129 GR---------IADALSVLDE-----------MRRRGCAPIPPMYHVILEAACSRGGGGG 168
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLD-ILGRVGRVNDMLNEFASMKEA-GVVPDFISY 176
A+ + + G C D+ N+VL+ + + G V++ L + + G PD +SY
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N +L L +R EM G P+++T+ LI R G E ++ M
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P I +Y +++D + K G +++A I + M S
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
+C I LC+ G S A R+L++ R AYN ++ +D + +++ +
Sbjct: 80 LCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM 139
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V+ + YT R + L +++++ S++ ++ A KS
Sbjct: 140 PVAPDAYT---YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGF 196
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A+ + D ++ C P+++TYN++++ + R GRV+D + G PD +SY T+
Sbjct: 197 GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTV 256
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L L +R + F EM E P+ +T+ L+ F R G +E ++++ M
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + +I+ + K G+VD A M S
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E +CK+ A+ +L +R K PN YN ++ +D + + L L SS
Sbjct: 187 LEAVCKSTGFGQAMEVLDEMRAKGC-TPNIVTYNVIINGMCREGRVDDAREFLNRL--SS 243
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
D YT + + E+++ + + + ++ F + +E+
Sbjct: 244 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + + G C + NIV++ + + GRV+D +M G PD ISY T+L
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R + +EM P+ +T+ I + G IE++ L M +
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I Y +L++ G+VD A+ +F M
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSM 451
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 132/306 (43%), Gaps = 35/306 (11%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN I +CK G V A + L ++ P+ +Y VL + + ++LK+
Sbjct: 322 LCNIVINTICKQGRVDDAFQFLNNMGSYGCS-PDTISYTTVLKGLCRAERWEDAKELLKE 380
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + + + F Q + IE++ + +I+ N ++ F +
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440
Query: 119 IEKALLIFDH-------------IKGL-------------------KCKPDLITYNIVLD 146
++ AL +F + GL C P+++T+N+++
Sbjct: 441 VDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 500
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G +++ + M E G P+ I+YNTLL+ + + L + +G+ P
Sbjct: 501 FFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSP 560
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D++TY+++I R +EE++++F+ ++ +RP +Y ++ L K D A+ F
Sbjct: 561 DIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFF 620
Query: 267 EEMNSS 272
M S+
Sbjct: 621 AYMVSN 626
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 119/305 (39%), Gaps = 41/305 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLL 60
N + C+ G + AA RL+ S+ P+AY ++ + + + +L D+L
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 172
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S YT A + Q + ++E+ +I+ N II + +++
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY---- 176
A + + +PD ++Y VL L R D+ FA M E +P+ +++
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292
Query: 177 -------------------------------NTLLNNLRKIRRLDLCLIYFREMGESGIK 205
N ++N + K R+D + MG G
Sbjct: 293 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 352
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD ++YT ++ R E++ L +M ++ P+ + + I L + G ++ A +
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412
Query: 266 FEEMN 270
E+M+
Sbjct: 413 IEQMS 417
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 112/255 (43%), Gaps = 10/255 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N +I LC+ G + A L++ + + NI YN ++ +D + ++
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIV---TYNALVNGFCVQGRVDSALELFYS 450
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ T++ YT + + E++Q +++ N ++ F +
Sbjct: 451 MPCKPNTIT---YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A+ + + + C P+LITYN +LD + + L + GV PD ++Y++
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSS 567
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L + R++ + F + + G++P + Y ++ + + N + ++ F M
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627
Query: 239 IRPSIYVYRSLIDNL 253
P+ Y +LI+ L
Sbjct: 628 CMPNELTYITLIEGL 642
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 26/249 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + C G V +A+ L S+ K PN Y +L +D + ++L ++L
Sbjct: 429 NALVNGFCVQGRVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAEML 484
Query: 61 VSSRTLSSDCYTN----------FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
DC N F + +M D+ +L +E++++ ++I N ++
Sbjct: 485 ------QKDCAPNVVTFNVLVSFFCQKGLM-DEAIEL---VEQMMEHGCTPNLITYNTLL 534
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
E+AL + + PD++TY+ ++ +L R RV + + F +++ G+
Sbjct: 535 DGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P + YN +L L K D + +F M +G P+ LTY LI+ ++E+ L
Sbjct: 595 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 654
Query: 231 FNDMKQQQI 239
++ + +
Sbjct: 655 LRELCSRGV 663
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ ++ L R GR +D + + +G D +YNTL+ + +LD
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLD---AA 132
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
R + + PD TYT +I G + E+L L +DM + +PS+ Y L++ + K
Sbjct: 133 RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192
Query: 256 MGKVDLAMTIFEEMNS 271
AM + +EM +
Sbjct: 193 STGFGQAMEVLDEMRA 208
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ +V+++ +I+ +I K + +A+ +FD + C+PD+ TYN +++ L +
Sbjct: 151 LAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCK 210
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G M+EAG P+ ++Y+TL+++L + R ++ L F M GI PD+ T
Sbjct: 211 IGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFT 270
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
YT+LI + +E+ L N+M I P I + L+D K GKV A+ + + M
Sbjct: 271 YTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMT 330
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 133/268 (49%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK A LL + NI +P+ +N ++ + + + +LK +
Sbjct: 275 IQGLCKFSRWKEASALLNEMTSLNI-MPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y++ + + D + ++ +I N +I + K+++I++A+
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + P+ ++YN ++ ++G++ + + F +M G +PD +Y+ LL+
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGF 453
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K L FR M + +KP+L+ YT L+ + ++GN +++ +LF+++ Q ++P +
Sbjct: 454 CKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHV 513
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+Y ++I+ L K G +D A+ F M +
Sbjct: 514 QLYTTIINGLCKEGLLDEALEAFRNMEA 541
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 2/239 (0%)
Query: 33 PNAYNCVLVASA--ETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN Y + + + +DL F +L ++ + +T + Q +
Sbjct: 126 PNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVEL 185
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++V + N II K + A + ++ C+P+++TY+ ++D L R
Sbjct: 186 FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR 245
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
VN+ L+ F+ MK G+ PD +Y +L+ L K R EM I PD++T
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVT 305
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L+D+F + G + E+L + M + + P++ Y SL+ V A +F M
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 10/234 (4%)
Query: 47 NDIDLSFQILKDLLVSSRTLSS----DCYTNFAR---AFIMTDDCTQLLIFIEEVVQIA- 98
ND SF+ + D L S + C FA+ A + ++I + + +++
Sbjct: 64 NDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVG 123
Query: 99 -SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
SP +I ++ + F + ++++ + + L +P ++T+ +++ L +VG
Sbjct: 124 LSP-NIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQA 182
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ F M G PD +YNT++N L KI ++M E+G +P+++TY+ LIDS
Sbjct: 183 VELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDS 242
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
R + E+L +F+ MK + I P I+ Y SLI L K + A + EM S
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTS 296
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 7/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G +AA LL+ + + PN Y+ ++ + ++ + I
Sbjct: 202 NTIINGLCKIGETAAAAGLLKKMEEAGC-QPNMVTYSTLIDSLCRDRLVNEALDIFS--Y 258
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ ++ +S D YT+ + + + E+ + I+ N ++ F K +
Sbjct: 259 MKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGK 318
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +AL + + + +P+++TY+ ++ V + F M G P+ SYN
Sbjct: 319 VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNI 378
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N K +R+D + F EM G+ P+ ++Y LI F + G + E+ LF +M
Sbjct: 379 LINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNG 438
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P ++ Y L+D K G + A +F M S+
Sbjct: 439 NLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQST 472
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA-SMKEAGVVPDFIS 175
R I+ AL F+H+ K P +I + +L + ++G+ D++ + M+ G+ P+ +
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ +N +++R+DL ++ + G++P ++T+T LI+ + G +++ LF+DM
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +P +Y Y ++I+ L K+G+ A + ++M +
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA 227
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 7/219 (3%)
Query: 29 NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
NIF +YN ++ + ID + Q+ +++ T ++ Y F +
Sbjct: 372 NIF---SYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQ 428
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ + + + ++ F K + KA +F ++ KP+L+ Y I++ +
Sbjct: 429 DLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAM 488
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G D F+ + G+ P Y T++N L K LD L FR M G PD
Sbjct: 489 CKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDE 548
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQ----QIRPSI 243
++Y +I + + +L L +M+ + +RP +
Sbjct: 549 ISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPCL 587
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 139/283 (49%), Gaps = 22/283 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N I L K GN AV+L +++ + +IF YN V+ ++ +++ + ++L++
Sbjct: 101 NFLIHGLFKDGNPDQAVKLFENMESSRVNPDIF---TYNTVISGLCKSGNLEKARELLEE 157
Query: 59 LLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPES-IIVVNRIIFAFAK 115
++ + D Y A I D + + I + +++A P +I N II A
Sbjct: 158 MIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCV 217
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ ++ +A I +K + C PDL+T+N +LD + G + L M ++PD I+
Sbjct: 218 AGRVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 274
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y L+N L ++ ++ + E+ G PD++ YT+L+D ++G IEE+ +L +M
Sbjct: 275 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 334
Query: 236 QQQIR---------PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++I P ++ Y ++ L K G + A+++ ++
Sbjct: 335 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDL 377
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 14/287 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC AG V A +L+++ + +N +L + + + ++L+++
Sbjct: 209 NSIIHALCVAGRVVEAAEILKTMSCSPDLV--TFNTLLDGFCKAGMLPRALEVLEEMCRE 266
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ YT +EE+V+ +I ++ KS +IE+A
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326
Query: 123 LLIFDHIKG---------LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ + + P L TYNIVL L + G ++ ++ + + G VPD
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 386
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YNTL++ L K R+ EM G P+ +T +++ R G ++++ L +
Sbjct: 387 VTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 446
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS---SLSDLA 277
M +++ P++ VY SLID L K ++D A + + M +L D A
Sbjct: 447 MSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFA 493
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 128/278 (46%), Gaps = 12/278 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CKAG + A+ +L+ + +NI LP+ Y ++ + ++F +L++++
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENI-LPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV---------VQIASPESIIVVNRIIF 111
YT+ + + + ++E+ V I + N ++
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
K I KA+ + + PD++TYN ++D L + RV + + M G P
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFP 419
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ ++ +++ L ++ R+D EM P+++ YT+LID ++ ++++ +
Sbjct: 420 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVL 479
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M+ Q + + YR LI ++ G+V AM +++EM
Sbjct: 480 DAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 41/254 (16%)
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
++ KDLL S + + + R T+ L F+ + + + + + N +I
Sbjct: 48 KVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGL 107
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR-------------------- 153
K ++A+ +F++++ + PD+ TYN V+ L + G
Sbjct: 108 FKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAP 167
Query: 154 ------------------VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
V + L MK AG PD I+YN++++ L R+
Sbjct: 168 DIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEI 227
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+ M S PDL+T+ L+D F + G + +L + +M ++ I P + Y L++ L +
Sbjct: 228 LKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 284
Query: 256 MGKVDLAMTIFEEM 269
+G+V +A + EE+
Sbjct: 285 VGQVQVAFYLLEEI 298
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 116/257 (45%), Gaps = 16/257 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+ G V A LL+ + + ++P+ AY ++ ++ +I+ + +++K++ S+
Sbjct: 279 VNGLCRVGQVQVAFYLLEEIVRQG-YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM--SA 335
Query: 64 RTLSSD-----------CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
R + ++ Y I ++ + I ++V ++ N +I
Sbjct: 336 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG 395
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K+ ++ +A + D + L C P+ +T V+ L RVGRV+D + M P+
Sbjct: 396 LCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 455
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+ Y +L++ L K R+D + M G+ D Y LI S G + E++ +++
Sbjct: 456 VVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYD 515
Query: 233 DMKQQQIRPSIYVYRSL 249
+M + P ++L
Sbjct: 516 EMVARGFLPDGSTSKTL 532
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
K D+ +YN +LDIL + G + + +G P+ +++ L+ K + L
Sbjct: 24 KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALE 83
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+ R + E + PD+ + LI + GN +++++LF +M+ ++ P I+ Y ++I L
Sbjct: 84 FLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLC 143
Query: 255 KMGKVDLAMTIFEEM 269
K G ++ A + EEM
Sbjct: 144 KSGNLEKARELLEEM 158
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ Q +AL + PD+ +N ++ L + G + + F +M+ + V PD
Sbjct: 74 KAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIF 133
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIK--PDLLTYTALIDS-FGRTGNIEESLRLF 231
+YNT+++ L K L+ EM G K PD++TY LI++ + G++EE+L +
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEIL 193
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ MK P + Y S+I L G+V A I + M+ S
Sbjct: 194 DGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS 234
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 8/176 (4%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ KS + ++ + C P+L+T+ I++ + G+ L ++ E
Sbjct: 31 NHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDE 90
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
V PD +N L++ L K D + F M S + PD+ TY +I ++GN+E+
Sbjct: 91 FSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEK 150
Query: 227 SLRLFNDM--KQQQIRPSIYVYRSLID-NLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
+ L +M + + P I Y +LI+ + K G V+ A+ I + M LAGP
Sbjct: 151 ARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMK-----LAGP 201
>gi|226530981|ref|NP_001141613.1| uncharacterized protein LOC100273731 [Zea mays]
gi|194705268|gb|ACF86718.1| unknown [Zea mays]
gi|414870824|tpg|DAA49381.1| TPA: hypothetical protein ZEAMMB73_722490 [Zea mays]
Length = 504
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 142/283 (50%), Gaps = 21/283 (7%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDL 59
M N ++ + G V A RL + + K + + + ++ ++ AS + + L ++++
Sbjct: 181 MYNLVMKVFAECGEVKAMWRLFEEMAAKGLPVSSRTFHLLICASVK---VGLRRRLVERF 237
Query: 60 LVSSRTLSSDCYTNFARAF------IMTDDCTQLLIFIEE--VVQIASPESII--VVNRI 109
+ SS T + Y F AF ++T + L+ ++ E +++ SP+ + VV R
Sbjct: 238 IRSS-TFN---YRPFRNAFNAILYTLLTIEQYSLIEWVHEKMILEGYSPDVLTYNVVLRA 293
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
+ K Q + L D + PDL TYN++L +LG+ + LN M + G
Sbjct: 294 KYMLGKLDQFHQLL---DEMGKNGLTPDLHTYNLLLHVLGKGDKPLAALNLLNYMSDVGC 350
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P+ + + L++ L + L+ C +F EM + G PD++ YT +I S+ G EE+ R
Sbjct: 351 RPNVLHFTNLIDGLGRAGNLEACRYFFDEMMKKGCDPDVVCYTVMIASYVAAGEFEEAQR 410
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F+DM + P++Y Y S+I L +G+ D A T+ ++M+S
Sbjct: 411 FFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKAFTMLKDMDSH 453
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 108/265 (40%), Gaps = 4/265 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIF----LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+C + V RL++ + F NA+N +L L + + +++
Sbjct: 221 ICASVKVGLRRRLVERFIRSSTFNYRPFRNAFNAILYTLLTIEQYSLIEWVHEKMILEGY 280
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y RA M Q ++E+ + + N ++ K + AL
Sbjct: 281 SPDVLTYNVVLRAKYMLGKLDQFHQLLDEMGKNGLTPDLHTYNLLLHVLGKGDKPLAALN 340
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ +++ + C+P+++ + ++D LGR G + F M + G PD + Y ++ +
Sbjct: 341 LLNYMSDVGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMKKGCDPDVVCYTVMIASYV 400
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ +F +M G P++ TY ++I G +++ + DM P+
Sbjct: 401 AAGEFEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKAFTMLKDMDSHGCTPNFS 460
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SL+ L+ GK A + + M
Sbjct: 461 VYSSLVRRLRNAGKDTQANNVIKYM 485
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
I+L ++L ++VS +++ + Y A F FI Q S + N
Sbjct: 136 IELVREVLFRIVVSVDSVNRERYPKLAYKF-----------FIWAGQQEGYQHSTSMYNL 184
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ FA+ +++ +F+ + T+++++ +VG ++ F
Sbjct: 185 VMKVFAECGEVKAMWRLFEEMAAKGLPVSSRTFHLLICASVKVGLRRRLVERFIRSSTFN 244
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P ++N +L L I + L +M G PD+LTY ++ + G +++
Sbjct: 245 YRPFRNAFNAILYTLLTIEQYSLIEWVHEKMILEGYSPDVLTYNVVLRAKYMLGKLDQFH 304
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L ++M + + P ++ Y L+ L K K A+ + M+
Sbjct: 305 QLLDEMGKNGLTPDLHTYNLLLHVLGKGDKPLAALNLLNYMS 346
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 102/181 (56%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F V + +P+ ++ + +I + K ++IEKA+ +F+ + + P+ +TY+ ++ L
Sbjct: 326 VFDTMVCKGFAPD-VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 384
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
VGR+ D + F M G +PDF+SY LL+ L K RRLD + + + S + PD+
Sbjct: 385 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 444
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
YT +ID R G +E + LF+++ + + P+++ Y +I+ L + G + A +F E
Sbjct: 445 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 504
Query: 269 M 269
M
Sbjct: 505 M 505
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 135/272 (49%), Gaps = 3/272 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G+ SAA+RLL+S+ N P+ Y ++ + + + +F + +++
Sbjct: 171 INGLCKVGSTSAAIRLLRSMEQGNC-QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG 229
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ S Y + A + + + E+V ++++ + ++ A K ++ +A
Sbjct: 230 ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 289
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + +P+++TYN ++D +++ + F +M G PD +SY+TL+N
Sbjct: 290 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 349
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
KI+R++ + F EM + P+ +TY+ L+ G +++++ LF++M + P
Sbjct: 350 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 409
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
Y L+D L K ++D A+ + + + S D
Sbjct: 410 VSYCILLDYLCKNRRLDEAIALLKAIEGSNMD 441
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 113/242 (46%)
Query: 31 FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
FL +++N S N +D + +L S +T + + +L
Sbjct: 22 FLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSL 81
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ P +I +N +I +F +++ A + I L +P++ T+N ++ L
Sbjct: 82 SHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCV 141
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G++ ++L+ F M G P+ ++Y TL+N L K+ + R M + +PD++
Sbjct: 142 EGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVV 201
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
YT++IDS + + ++ LF++M Q I PSI+ Y SLI L + + + EM
Sbjct: 202 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 261
Query: 271 SS 272
+S
Sbjct: 262 NS 263
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 92/179 (51%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ +++++ +I N +I +I + L +FD + G +P+++TY +++ L +
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
VG + + SM++ PD + Y +++++L K R++ F EM GI P + T
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI + + L N+M +I P++ ++ +++D L K GKV A + + M
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 295
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
Query: 33 PNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN Y N ++ + + +F +L +L + + R + ++L
Sbjct: 92 PNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHL 151
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ +++ +I K A+ + ++ C+PD++ Y ++D L +
Sbjct: 152 FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 211
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V N F+ M G+ P +YN+L++ L + EM S I P+++
Sbjct: 212 DRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVI 271
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ ++D+ + G + E+ + + M ++ + P++ Y +L+D ++D A+ +F+ M
Sbjct: 272 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 330
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/266 (16%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V A ++ + + + PN YN ++ +++D + ++ ++
Sbjct: 276 VDALCKEGKVMEAHDVVDMMIKRGV-EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 334
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ + + + EE+ + + + + ++ +++ A+
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 394
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + PD ++Y I+LD L + R+++ + +++ + + PD Y +++ +
Sbjct: 395 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 454
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L+ F + G+ P++ TYT +I+ + G + E+ +LF +MK++ P+
Sbjct: 455 CRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 514
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y + + + + + +EM
Sbjct: 515 CTYNLITRGFLRNNETLRGIQLLQEM 540
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 135/272 (49%), Gaps = 7/272 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
+CK+G + A+ LL+ + ++NI L Y+ ++ + +D +F + ++ +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 68 SDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
Y F DD +LL ++++ +++ + +I +F K ++ +A
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLL---RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + P+ ITYN ++D + R+ + + M G PD +++N L+N
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K R+D L FREM G+ + +TY L+ F ++G +E + +LF +M +++RP I
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
Y+ L+D L G+++ A+ IF ++ S +L
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 132/263 (50%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G++ A L + K F + YN ++ D ++L+D++
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + ++ +F+ + ++E++Q + I N +I F K ++E+A+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + C PD++T+NI+++ + R++D L F M GV+ + ++YNTL+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +L++ F+EM ++PD+++Y L+D G +E++L +F +++ ++ I
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
+Y +I + KVD A +F
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLF 531
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 96/188 (51%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
++ I+ +V+ + + ++ KS Q A+ + ++ K D + Y+I++D
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + G +++ N F M+ G D I+YNTL+ R D R+M + I P+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++T++ LIDSF + G + E+ +L +M Q+ I P+ Y SLID K +++ A+ + +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 268 EMNSSLSD 275
M S D
Sbjct: 393 LMISKGCD 400
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 96/185 (51%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ L ++ +V++ ++I +N ++ + ++ A+++ D + +P+ +TY V
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
L+++ + G+ + M+E + D + Y+ +++ L K LD F EM G
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
K D++TY LI F G ++ +L DM +++I P++ + LID+ K GK+ A
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 265 IFEEM 269
+ +EM
Sbjct: 355 LLKEM 359
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 89/177 (50%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+++++ ++ N ++ ++ +AL + D + + KP LIT N +++ L G
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+V+D + M E G P+ ++Y +LN + K + L + R+M E IK D + Y+
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ID + G+++ + LFN+M+ + + I Y +LI G+ D + +M
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 10/253 (3%)
Query: 20 RLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFI 79
R + D+N+ + + LV + +DL +D+ + SR L + +F R F
Sbjct: 44 RGFSTFSDRNLSYRDKLSSGLVGIKADDAVDL----FRDM-IQSRPLPT--VIDFNRLFS 96
Query: 80 MTDDCTQLLIFIEEVVQIAS---PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP 136
Q + + Q+ S SI ++ +I F + R++ A I L +P
Sbjct: 97 AIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEP 156
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D + +N +L+ L RV++ L M E G P I+ NTL+N L ++ ++
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M E+G +P+ +TY +++ ++G ++ L M+++ I+ Y +ID L K
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 257 GKVDLAMTIFEEM 269
G +D A +F EM
Sbjct: 277 GSLDNAFNLFNEM 289
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 4/260 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK + A++++ + K P+ +N ++ + N ID ++ +++
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCD-PDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ Y + F + +E+V I+ ++ + ++E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL IF I+ K + D+ Y I++ + +V+D + F S+ GV D +YN ++
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L + L I FR+M E G PD LTY LI + + + L +MK
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610
Query: 241 PSIYVYRSLIDNLKKMGKVD 260
+ + +I N+ G++D
Sbjct: 611 ADVSTVKMVI-NMLSSGELD 629
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 129/257 (50%), Gaps = 7/257 (2%)
Query: 18 AVRLLQSLRDKNIFLPNAYNCVLVASA----ETNDIDLSFQILKDLLVSSRTLSSDCYTN 73
AV L + + + L + +++ A E++D+ +++ D + L D Y
Sbjct: 339 AVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDL---CELVDDFIKKGGNLGFDMYIM 395
Query: 74 FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK 133
++F+ D ++ + ++V S+ N +I FAK+ ++E+AL ++
Sbjct: 396 IIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESG 455
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
P+L+T+N +++ ++G V+D + E G++PD I++ +L++ L +LD
Sbjct: 456 FSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAF 515
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
F EM E G++P++ TY LI G++ +++ L N MK I P Y + + I +
Sbjct: 516 NCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSF 575
Query: 254 KKMGKVDLAMTIFEEMN 270
+M K++ A +F +M+
Sbjct: 576 CRMRKIEKAQKLFNDMS 592
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 90 FIEEVVQIASPESIIVVNRIIFA------FAKSRQIEKAL---------------LIFDH 128
F+ +Q A+ E ++ V ++A FA+ R + +AL L+ D
Sbjct: 77 FVVRALQHAAGEPLLCVRLYVWASRFGQHFARDRSVRRALGDALLRRGPVVLSAALVAD- 135
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
++ C+ +++ GR+G + F + G+ P YN ++ +
Sbjct: 136 VRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGA 195
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+D + F++M G +PD TY L+ R G ++E+LRL M++ IRP++ Y
Sbjct: 196 VDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTM 255
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+D +V+ A+ + E M
Sbjct: 256 LVDGFCNASRVEEAVCVLERM 276
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F + L +P YN V+ R G V+ F M G PD +YNTL++ +
Sbjct: 167 VFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVC 226
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ +D L ++M +GI+P+++TYT L+D F +EE++ + MK++ + +
Sbjct: 227 RRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEA 286
Query: 245 VYRSLIDN 252
YRSL+
Sbjct: 287 TYRSLVHG 294
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
+YN V+ A+ +++ + + +K + S + + + ++ + F++
Sbjct: 426 ESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKM 485
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
V++ +I +I + Q++ A F + +P++ TYN+++ L G
Sbjct: 486 VMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGH 545
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V+ + MK G+ PD S+N + + ++R+++ F +M G+ PD TY A
Sbjct: 546 VSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNA 605
Query: 214 LIDSFGRTGNIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGK 258
LI + ++E+ + M+ I + Y ++ L KMG+
Sbjct: 606 LIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGR 651
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F++ V ++ S + N +I A ++ ++ A L F + C+PD TYN ++ +
Sbjct: 167 VFVQ-VPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGV 225
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G V++ L M+ AG+ P+ ++Y L++ R++ + M E G+
Sbjct: 226 CRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATE 285
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
TY +L+ R E + R+ ++ + Y +L+ L K
Sbjct: 286 ATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSK 332
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 4/272 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN + LCK G + A LL+ + + I PN +YN V++A ++DL+ + +
Sbjct: 444 ICNTILSWLCKQGKIDKATELLRKMESRGIG-PNVVSYNNVMLAHCRKKNMDLARTVFSN 502
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L ++ Y+ D +L + ++ + +V II K Q
Sbjct: 503 MLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQ 562
Query: 119 IEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
KA L+ + I+ + ++YN ++D + G ++ + + M G+ P+ I+Y
Sbjct: 563 TSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYT 622
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L++ L K R+D L EM G+K D+ Y ALI F + N+E + LF+++ ++
Sbjct: 623 SLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEE 682
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ PS VY SLI + +G + A+ ++++M
Sbjct: 683 GLNPSQPVYNSLISGFRNLGNMVAALDLYKKM 714
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 2/266 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G S A LL ++ ++ F + +YN ++ + ++D + +++ +
Sbjct: 554 INGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANG 613
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + YT+ + Q L +E+ I +I F K +E A
Sbjct: 614 ISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESAS 673
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + P YN ++ +G + L+ + M + G+ D +Y TL++ L
Sbjct: 674 ALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 733
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K L L + EM G+ PD + YT +++ + G + +++F +MK+ + P++
Sbjct: 734 LKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 793
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y ++I + G +D A + +EM
Sbjct: 794 LIYNAVIAGHYREGNLDEAFRLHDEM 819
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 137/304 (45%), Gaps = 44/304 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDID---------LSFQ 54
++ CK N++ A LL+ +++K + +P+ Y V++AS + +++ +S
Sbjct: 274 VQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDG 333
Query: 55 ILKDLLVSSRTLSSDCYTN--------------------------FARAFIMTDDCTQLL 88
I +++ ++ ++ C N F + + L
Sbjct: 334 ISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKAL 393
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLD 146
F +++ + S+ V+ II + K ++ E+AL +FD GL ++ N +L
Sbjct: 394 EFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA---NVFICNTILS 450
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNT-LLNNLRKIRRLDLCLIYFREMGESGIK 205
L + G+++ M+ G+ P+ +SYN +L + RK + +DL F M E G+K
Sbjct: 451 WLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRK-KNMDLARTVFSNMLEKGLK 509
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+ TY+ LID + + + L + N M I + VY+++I+ L K+G+ A +
Sbjct: 510 PNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 569
Query: 266 FEEM 269
M
Sbjct: 570 LANM 573
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK-CKPDLITYNIVL 145
L +F + + A P+S++ + + A K+ + A + +K K C P TY V+
Sbjct: 252 LEVFSRAIERGAEPDSLLY-SLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVI 310
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ G + D + M G+ + ++ +L+ K L L F +M G
Sbjct: 311 LASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPS 370
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+ +T++ LI+ F + G +E++L + M+ + PS++ ++I K K + A+ +
Sbjct: 371 PNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKL 430
Query: 266 FEE 268
F+E
Sbjct: 431 FDE 433
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
VNR + A + I +A ++ + + D T +++ R + + L F+
Sbjct: 200 VNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAI 259
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI-KPDLLTYTALIDSFGRTGNI 224
E G PD + Y+ + K L + REM E + P TYT++I + + GN+
Sbjct: 260 ERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 319
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+++R ++M I ++ SLI K + A+ +F +M
Sbjct: 320 EDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKM 364
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
CK A++LL +RDK P+ YN V+ + +D + + LK+L +
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGC-TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 61
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII----------------- 110
+ Y + + + E+ Q P +++ N +I
Sbjct: 62 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 121
Query: 111 ------------------FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
AF K ++++KA+ D + C PD+++YN +L L R G
Sbjct: 122 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 181
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V+ + +K+ G P ISYNT+++ L K + L EM G++PD++TY+
Sbjct: 182 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 241
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ R IE+++R F ++ IRP+ +Y ++I L K + A+ +F M
Sbjct: 242 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 298
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC A A L+ + K PN +N ++ ++ + ++L+ +
Sbjct: 69 LKGLCTAERWEDAEELMGEMGQKGC-PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T +S Y AF + + F++ +V I+ N ++ A +S +++ A+
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ +K C P LI+YN V+D L + G+ + L M G+ PD I+Y+T+ L
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 247
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F ++ + GI+P+ + Y A+I + ++ LF M P+
Sbjct: 248 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 307
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI+ L G + A + +E+ S
Sbjct: 308 STYTILIEGLAYEGLIKEARDLLDELCS 335
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A K ++A+ + D ++ C PD++TYN+V++ + + GRV+D + ++ G P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ +SYN +L L R + EMG+ G P+++T+ LI R G +E +L +
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + P+ Y L+ K K+D AM + M S
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 160
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC++G V AV LL L+DK + +YN V+ + + ++L +++
Sbjct: 171 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV- 229
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S+ L D Y+ A D + +V + + ++ N II K R+
Sbjct: 230 -SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 288
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFAS 163
A+ +F ++ G C P+ TY I+++ L G + D+L+E S
Sbjct: 289 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 335
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 102/181 (56%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F V + +P+ ++ + +I + K ++IEKA+ +F+ + + P+ +TY+ ++ L
Sbjct: 335 VFDTMVCKGFAPD-VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 393
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
VGR+ D + F M G +PDF+SY LL+ L K RRLD + + + S + PD+
Sbjct: 394 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 453
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
YT +ID R G +E + LF+++ + + P+++ Y +I+ L + G + A +F E
Sbjct: 454 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 513
Query: 269 M 269
M
Sbjct: 514 M 514
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 134/269 (49%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G+ SAA+RLL+S+ N P+ Y ++ + + + +F + +++
Sbjct: 180 INGLCKVGSTSAAIRLLRSMEQGNC-QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG 238
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ S Y + A + + + E+V ++++ + ++ A K ++ +A
Sbjct: 239 ISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAH 298
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + +P+++TYN ++D +++ + F +M G PD +SY+TL+N
Sbjct: 299 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 358
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
KI+R++ + F EM + P+ +TY+ L+ G +++++ LF++M + P
Sbjct: 359 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 418
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y L+D L K ++D A+ + + + S
Sbjct: 419 VSYCILLDYLCKNRRLDEAIALLKAIEGS 447
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 113/242 (46%)
Query: 31 FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
FL +++N S N +D + +L S +T + + +L
Sbjct: 31 FLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSL 90
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ P +I +N +I +F +++ A + I L +P++ T+N ++ L
Sbjct: 91 SHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCV 150
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G++ ++L+ F M G P+ ++Y TL+N L K+ + R M + +PD++
Sbjct: 151 EGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVV 210
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
YT++IDS + + ++ LF++M Q I PSI+ Y SLI L + + + EM
Sbjct: 211 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 270
Query: 271 SS 272
+S
Sbjct: 271 NS 272
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 92/179 (51%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ +++++ +I N +I +I + L +FD + G +P+++TY +++ L +
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
VG + + SM++ PD + Y +++++L K R++ F EM GI P + T
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI + + L N+M +I P++ ++ +++D L K GKV A + + M
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 304
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
Query: 33 PNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN Y N ++ + + +F +L +L + + R + ++L
Sbjct: 101 PNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHL 160
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++++ +++ +I K A+ + ++ C+PD++ Y ++D L +
Sbjct: 161 FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 220
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+V N F+ M G+ P +YN+L++ L + EM S I P+++
Sbjct: 221 DRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVI 280
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ ++D+ + G + E+ + + M ++ + P++ Y +L+D ++D A+ +F+ M
Sbjct: 281 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 339
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/266 (16%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V A ++ + + + PN YN ++ +++D + ++ ++
Sbjct: 285 VDALCKEGKVMEAHDVVDMMIKRGV-EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 343
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ + + + EE+ + + + + ++ +++ A+
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 403
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + PD ++Y I+LD L + R+++ + +++ + + PD Y +++ +
Sbjct: 404 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 463
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L+ F + G+ P++ TYT +I+ + G + E+ +LF +MK++ P+
Sbjct: 464 CRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 523
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y + + + + + +EM
Sbjct: 524 CTYNLITRGFLRNNETLRGIQLLQEM 549
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 6/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKA A + Q + D + PN YNC++ Q+L+ + S+
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGV-KPNNDTYNCLIHGYLSIGKWKEVVQMLEKM--SA 270
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R L DCYT + +++ F++ +V+ + N A+AK I+KA+
Sbjct: 271 RGLKPDCYT-YGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 329
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ ++ P+++ Y ++D L ++GRV+D +F M GV P+ + +N+L+ L
Sbjct: 330 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ + + EM + GI P+ + + LI + G + E RL + M+ +RP
Sbjct: 390 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 449
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y LI G+ D A +F+ M S
Sbjct: 450 FSYTPLISGYCLAGRTDEAEKVFDGMVS 477
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
+ P +++ +I K++ ++A +F + KP+ TYN ++ +G+ ++
Sbjct: 202 SCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEV 261
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ M G+ PD +Y +LLN L + + + M E+G+ PD + +
Sbjct: 262 VQMLEKMSARGLKPDCYTYGSLLNYLCALSEMH---SFLDLMVENGLSPDHHIFNIFFSA 318
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + G I++++ +FN M+Q + P++ Y +LID L K+G+VD A F +M
Sbjct: 319 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 370
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 94/199 (47%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT + + + + +V I + + N ++ + + +I+ A +F +
Sbjct: 452 YTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 511
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P ++TYN +L L + R ++ + +M +G D +YN +LN L K +D
Sbjct: 512 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVD 571
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F+ + G++ +++T+T +I + + G E+++ LF + + P++ YR +
Sbjct: 572 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVA 631
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+NL + G ++ ++F M
Sbjct: 632 ENLIEEGSLEEFDSLFSAM 650
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLN 159
IV+N+++ +++ +A+ ++ + L C PD ++Y+I+L R + +L
Sbjct: 134 IVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLR 193
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
A+ P+ ++Y T+++ L K + D F++M ++G+KP+ TY LI +
Sbjct: 194 MMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYL 253
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
G +E +++ M + ++P Y Y SL++ L
Sbjct: 254 SIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYL 287
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 116/265 (43%), Gaps = 9/265 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-----ETNDIDLSFQILK 57
N I LC G V RL+ + + P+A++ + S T++ + F +
Sbjct: 418 NTLICNLCNVGRVMEGRRLIDLMEHVGV-RPDAFSYTPLISGYCLAGRTDEAEKVFDGMV 476
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ +S ++ Y + E+++ ++ N I+ +++
Sbjct: 477 SIGLSPTEVT---YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTK 533
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ +A ++ ++ K D+ TYNI+L+ L + V++ F S+ G+ + I++
Sbjct: 534 RFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFT 593
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++ L K R + + F + +G+ P+++TY + ++ G++EE LF+ M++
Sbjct: 594 IMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKN 653
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLA 262
P+ + +L+ L G + A
Sbjct: 654 GTAPNSQMLNALVRRLLHRGDISRA 678
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLL----NNLRKIRRLDLCLIYFREMGESGIK 205
RVG D+L M E G PD +SY+ LL N R L+L + + G S
Sbjct: 148 RVGEAMDVL--LQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRS-CP 204
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+++TYT +ID + + + +F M ++P+ Y LI +GK + +
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQM 264
Query: 266 FEEMNS 271
E+M++
Sbjct: 265 LEKMSA 270
>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 20/281 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL-VSSR 64
IE LC G V A SL DKNI Y+ ++ ET+ + S+++ LL
Sbjct: 517 IEGLCSGGKVLEAEVYFNSLEDKNI---EIYSAMVNGYCETDLVKKSYEVFLKLLNQGDM 573
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ C+ ++ MT D + + ++ ++ S I+ ++I+ A ++ ++ A
Sbjct: 574 AKKASCFKLLSK-LCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNART 632
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL---- 180
+FD PD++TY I+++ R+ + + + F MK G+ PD I++ LL
Sbjct: 633 LFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSL 692
Query: 181 ----------NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+ RK L + I R+M + I PD++ YT L+D +T N ++++ L
Sbjct: 693 KEYLGKRFSSHGKRKTTSLYVSTI-LRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSL 751
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
F+ M + + P Y +L+ L G V+ A+T+ EM+S
Sbjct: 752 FDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSS 792
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 7/270 (2%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVS 62
YIE LC +LQ+ R N L AY V+ +D + + D+
Sbjct: 270 AYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQ 329
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
Y++ + + + + L +E++ + +VV+ I+ ++
Sbjct: 330 GVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLG---EMGMT 386
Query: 123 LLIFDHIKGLKCKP---DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
L + D K LK D + YNIV D L +G+V D + MK + D Y TL
Sbjct: 387 LEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTL 446
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L F+EM E G+KPD++TY L R G+ E+++L + M+ Q +
Sbjct: 447 INGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGM 506
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P+ ++ +I+ L GKV A F +
Sbjct: 507 KPNSTTHKMIIEGLCSGGKVLEAEVYFNSL 536
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 128/270 (47%), Gaps = 7/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDI--DLSFQILKDLLVSS 63
I+ LCK G++ + + + + + +P++Y N+ DL +++L+ +
Sbjct: 237 IKALCKKGDLKQPLCVFEEMERVGV-IPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGN 295
Query: 64 RTLSSDCYTNFARAFI--MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L YT R F M D Q +F + Q P+ + V + +I + KS + +
Sbjct: 296 APLEVYAYTAVVRGFCNEMKLDEAQG-VFDDMERQGVVPD-VYVYSSLIHGYCKSHNLLR 353
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL + D + K + + + +L LG +G +++++F +KE+G+ D ++YN + +
Sbjct: 354 ALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFD 413
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + +++ + EM + D+ YT LI+ + G++ + +F +MK++ ++P
Sbjct: 414 ALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKP 473
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y L L + G + + + M S
Sbjct: 474 DIVTYNVLAAGLSRNGHARETVKLLDFMES 503
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N + + +++KAL +++ +K P+ TY IV+ L + G + L F
Sbjct: 195 VLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFE 254
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+ GV+P + + L R DL + + ++ YTA++ F
Sbjct: 255 EMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEM 314
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++E+ +F+DM++Q + P +YVY SLI K + A+ + +EM S
Sbjct: 315 KLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMIS 363
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/260 (17%), Positives = 110/260 (42%), Gaps = 5/260 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
L + G V + L++ +FL AYN V A ++ + ++++++ L
Sbjct: 380 LGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLD 439
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
YT + + D +E+ + I+ N + +++ + + + D
Sbjct: 440 VKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLD 499
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
++ KP+ T+ ++++ L G+V + F S+++ + Y+ ++N +
Sbjct: 500 FMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIE----IYSAMVNGYCETD 555
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+ F ++ G + L+ TG+IE++++L + M + PS +Y
Sbjct: 556 LVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYS 615
Query: 248 SLIDNLKKMGKVDLAMTIFE 267
++ L + G + A T+F+
Sbjct: 616 KILAALCQAGDMKNARTLFD 635
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++N + + D + + + GI PD+LT L + G ++++L ++ +
Sbjct: 162 AFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQL 221
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
K+ P+ Y Y +I L K G + + +FEEM
Sbjct: 222 KRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEM 256
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 94/176 (53%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+V + I N ++ A K Q++ A I + P+++TY+ ++D + G
Sbjct: 208 EMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAG 267
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R++D N F MK G+ D +SYNTLL+ K+ R + + REM SGI+ D++TY
Sbjct: 268 RLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYN 327
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
AL+ +G+ + ++F +MK + + P++ Y +LID K G AM +F E
Sbjct: 328 ALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFRE 383
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 97/168 (57%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + +I +AK+ +++ A +F+ +K L D ++YN +L I ++GR + ++
Sbjct: 252 NVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVC 311
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+ +G+ D ++YN LL K + D+ F EM + P+LLTY+ LID + +
Sbjct: 312 REMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKG 371
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G E++ +F + K+ ++ + +Y +LID L K G V+ A+++ +EM
Sbjct: 372 GLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEM 419
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 9 LCKAGNVSAAVRLLQSLR-----DKNIFLPNAYNCVLVASAETNDIDLSFQIL-----KD 58
+C G + A R L D++IF YN +L A + +D++F+I+ K+
Sbjct: 192 VCSKGGLWEAARSLSCEMVNRGIDQDIF---TYNTLLDAVCKGGQLDMAFEIMSEMPAKN 248
Query: 59 LLVSSRTLSS--DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+L + T S+ D Y R DD L E+ + + N ++ +AK
Sbjct: 249 ILPNVVTYSTMIDGYAKAGR----LDDARNLF---NEMKFLGISLDRVSYNTLLSIYAKL 301
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ E+A+ + ++ + D++TYN +L G+ + + + F MK V P+ ++Y
Sbjct: 302 GRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTY 361
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+TL++ K + FRE ++G+K D++ Y+ALID+ + G +E ++ L ++M +
Sbjct: 362 STLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTK 421
Query: 237 QQIRPSIYVYRSLID 251
+ IRP++ Y S+ID
Sbjct: 422 EGIRPNVVTYNSIID 436
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 36/207 (17%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG----RVNDM 157
++ + II A+ +S +A+ IF +K KP+L+TYN V+D G+ G RV ++
Sbjct: 111 TVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEI 170
Query: 158 LNEF---------------------ASMKEA-----------GVVPDFISYNTLLNNLRK 185
+E + EA G+ D +YNTLL+ + K
Sbjct: 171 FDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCK 230
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+LD+ EM I P+++TY+ +ID + + G ++++ LFN+MK I
Sbjct: 231 GGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVS 290
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +L+ K+G+ + AM + EM +S
Sbjct: 291 YNTLLSIYAKLGRFEEAMDVCREMENS 317
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G + A ++ + KNI LPN Y+ ++ A+ +D + + ++
Sbjct: 222 NTLLDAVCKGGQLDMAFEIMSEMPAKNI-LPNVVTYSTMIDGYAKAGRLDDARNLFNEMK 280
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+L Y + + + E+ + ++ N ++ + K + +
Sbjct: 281 FLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYD 340
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+F+ +K P+L+TY+ ++D+ + G + ++ F K+AG+ D + Y+ L+
Sbjct: 341 VVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALI 400
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ L K ++ + EM + GI+P+++TY ++ID+FGR E
Sbjct: 401 DALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTE 445
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ +++ L ++ ++++ F+ G + ++A+I ++GR+G E++++F MK
Sbjct: 81 SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140
Query: 237 QQIRPSIYVYRSLIDNLKKMG-KVDLAMTIFEEM 269
++P++ Y ++ID K G + + IF+EM
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEM 174
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++ LGR+G+V F + G +++ +++ + + + F M + G
Sbjct: 83 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142
Query: 204 IKPDLLTYTALIDSFGRTG-NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+KP+L+TY A+ID+ G+ G + L +F++M + ++P + SL+ K G + A
Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAA 202
Query: 263 MTIFEEM 269
++ EM
Sbjct: 203 RSLSCEM 209
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC AG AV+LL ++ + PN Y ++ + +++ + +L
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCG-PNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y+ + L E ++ S + N II F I+KA
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT 432
Query: 124 LIFDHIKGLKCKPDLITYNIVLDI-----------------------------------L 148
IFD + P++ITYNI++ I
Sbjct: 433 AIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGF 492
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G++ + F M E G+ P+ ++YN ++N + ++D L F +M ESG P
Sbjct: 493 SRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSS 552
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY +I F +T I E+ M +Q + P++ Y S ID L K G+ LA IF E
Sbjct: 553 GTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHE 612
Query: 269 M 269
M
Sbjct: 613 M 613
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 90/160 (56%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F++ ++E A +F+ + P+++TYN +++ V +V+D L F M E+G
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
VP +YN +++ K R+ + +M + G+ P+++TYT+ ID + G +
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++F++MK++ P++ Y SLID L + G+ + A + ++
Sbjct: 608 KIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD 647
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ E AL IF+ + P+ TYN+++ +G + F M +AG P+ I+YN
Sbjct: 392 RFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYN 451
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ K ++ + M +G+K D TY LI F R G +E + LFN+M +
Sbjct: 452 IIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH 511
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I P++ Y ++I+ + KVD A+ +F +M S
Sbjct: 512 GISPNVVTYNAIINGYLTVAKVDDALALFWKMVES 546
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
++IE + P ++ N +I ++++A LI HI PD TY ++
Sbjct: 189 VYIEMLNSGIRP-NLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G ++ F M + G P+ ++Y+ L+N L RL+ + EM + GI+P +
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTV 307
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
YT I S G E+++L MK++ P++ Y +LI L + GK ++A+ ++ +
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367
Query: 269 M 269
M
Sbjct: 368 M 368
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 111/273 (40%), Gaps = 46/273 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA------YNCVLVASAETNDIDLSFQIL 56
N I+ LC G V A ++ +IF A Y +++ + ++DL+F++
Sbjct: 206 NAMIKILCNKGKVQEAELIM-----GHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEM- 259
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
F R ++ D C P S+ + +I
Sbjct: 260 -----------------FDR--MVKDGC--------------DPNSV-TYSALINGLCSE 285
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++E+A+ + + + +P + Y I + L GR + + MK+ G P+ +Y
Sbjct: 286 GRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTY 345
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L++ L + + ++ + + +M G+ P +TY+ALI+ G E +L +F M
Sbjct: 346 TALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLS 405
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y +I +G + A IF++M
Sbjct: 406 HDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 7/266 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I + G + A L + + I PN YN ++ +D + + ++ S
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGIS-PNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
SS Y F T+ ++ F ++V+ ++I I K+ + A
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF +K P+L TY+ ++D L + G+ D + + G P+ +Y TL+ L
Sbjct: 608 KIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGL 663
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R M + G++P Y AL+ + +E +L++F+ M +P +
Sbjct: 664 CGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCL 723
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y++LI L K A +F+ M
Sbjct: 724 SDYKALICALCKANFRQKAQCMFQTM 749
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G V RV +L+E + + G S++TLL L K L + EM SGI+P+L
Sbjct: 145 GEVKRVIQVLSEINTTYDFGYT--LYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNL 202
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
T+ A+I G ++E+ + + P + Y SLI K G +DLA +F+
Sbjct: 203 FTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDR 262
Query: 269 M 269
M
Sbjct: 263 M 263
>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
Length = 975
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 131/271 (48%), Gaps = 3/271 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M N I +LC + + ++D + P+ YN + D + +L++
Sbjct: 477 MFNDLIHELCNMDRLEEGYGIFNQMKDLGL-TPSEFTYNSLFYGICRRKDPKAALDLLRE 535
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + T + + T+ + F++ ++QI I+ + + + +
Sbjct: 536 MQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGE 595
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ AL +F I PD++ +NI+++ + ++++ M E G+ P ++YN
Sbjct: 596 VDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNL 655
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K R++ + Y +M +P ++TYT+LID F G +E+++L+ +M+++
Sbjct: 656 MIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKG 715
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y + I+ L+K G+++ A+T FEEM
Sbjct: 716 CAPNNIAYTAFINGLRKCGRIETALTYFEEM 746
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 12/277 (4%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C +++LC +G V+ AV+ L + FLP+ Y+ + T ++D + + +D+
Sbjct: 548 CTEMVQQLCFSGRVTEAVQFLDGMLQIG-FLPDIVTYSAAMNGMCNTGEVDDALHLFRDI 606
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ F + + +EE+++ S++ N +I K+ +I
Sbjct: 607 SCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRI 666
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKA+ D + + +P +ITY ++D GR ++ + + M+E G P+ I+Y
Sbjct: 667 EKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAF 726
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N LRK R++ L YF EM G + D + I+ G + L ++ Q+
Sbjct: 727 INGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPMKGCELLKEVLQKD- 785
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ +NLK +G ++ A+ + + SD+
Sbjct: 786 --------TYGNNLKMVGLINEAVVELSKDGITSSDI 814
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 51/269 (18%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN VL +++ ++Q+L+ ++ + +++D I D
Sbjct: 389 YNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIRED------------- 435
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
A P S N ++ K ++++ AL + + L CK ++ +N ++ L + R+
Sbjct: 436 --AKPNSD-SFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLE 492
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG----IK------ 205
+ F MK+ G+ P +YN+L + + + L REM +G IK
Sbjct: 493 EGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMV 552
Query: 206 -------------------------PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
PD++TY+A ++ TG ++++L LF D+ +
Sbjct: 553 QQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYL 612
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + + LI+ +K K+D A I EEM
Sbjct: 613 PDVVAHNILINGFRKSSKLDEAQKIMEEM 641
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 26/276 (9%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL------ 60
L AG AVR + R PN+Y NC+L A A+ D + L++++
Sbjct: 148 LGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDG 207
Query: 61 -VSSRTLSS--DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
V TL+S CY N R DD + + E+ + V+ ++ AF+K
Sbjct: 208 SVDKYTLTSLLRCYCNAGR----PDDANDVFQRMSELGWVDEH----VLTTLMVAFSKWG 259
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ + ++ L + T ++++ + GRV+ ++ FA M G V D Y+
Sbjct: 260 KVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYS 319
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND---- 233
L+ L + + + + F+EM SG+ PD+ +I++F R G+ N+
Sbjct: 320 VLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEY 379
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+K + P +Y +++ L G+V+ A + M
Sbjct: 380 LKSGSVVP---LYNVVLEELVHCGEVEAAYQLLRSM 412
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 108/283 (38%), Gaps = 21/283 (7%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSRTLSSD 69
K G V AV LL S+ + L VLV + +D + + ++ +
Sbjct: 257 KWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLA 316
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK-ALLIFDH 128
Y+ D + + +E+ + ++ ++I AF + I ++
Sbjct: 317 MYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINEN 376
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV------------------ 170
+ LK + YN+VL+ L G V SM G
Sbjct: 377 AEYLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDA 436
Query: 171 -PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P+ S+N ++ L K+++LD+ L ++M G K +L + LI +EE
Sbjct: 437 KPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYG 496
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+FN MK + PS + Y SL + + A+ + EM ++
Sbjct: 497 IFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTN 539
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 120 EKALLIFDHIKG-LKCKPDLITYNIVLDILGRVGRVNDM---LNEFASMKEAGVVPDFIS 175
+ A+ FD + C P+ TYN +LD L + GR +D L E + G V D +
Sbjct: 155 DTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSV-DKYT 213
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+LL R D F+ M E G D T L+ +F + G ++ ++ L M+
Sbjct: 214 LTSLLRCYCNAGRPDDANDVFQRMSELGWV-DEHVLTTLMVAFSKWGKVDGAVELLGSME 272
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+R S L+ K G+VD AM +F +M S
Sbjct: 273 ALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVS 308
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC +S A + +++R+ + LPN YN ++ + + + ++ +++L
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGM-LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG 293
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + TD+ F+ ++ +I V N +I + K+ + +AL
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ I+ + PD+ TY+I++ L V R+ + MK+ G +P+ ++YNTL++
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + +M E GI+P+++T++ LID + + G +E ++ L+ +M + + P +
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LID K G A + +EM +
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 109/236 (46%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
A N VL + D +++ D++ + + Y D + +E
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+++ ++++ +I +I +A +F ++ P+L TYN ++D ++
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V L + M G++P+ +++ L++ L K + + +M G+ P++ Y
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LID + + GN+ E+L L +++++ +I P ++ Y LI L + +++ A + +EM
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
+ +++ +G V + L + M V+P + N +L+ L K R D + +M
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
G P+++TY LID R G+ ++ RLF++M +++I P++ +Y LI L ++
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 261 LAMTIFEEMNSS 272
A ++F M +S
Sbjct: 246 EAESMFRTMRNS 257
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++I +I A+ +++ KAL +F ++ +PD++T + L +G ++
Sbjct: 695 KNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWI 754
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKI------RRLDLCLIYFREMGESGIKPDLLTYTAL 214
A ++ G+ D N+L+N K RR L L P+ +T+ +
Sbjct: 755 HAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVL------------PNDVTFMGV 802
Query: 215 IDSFGRTGNIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMG 257
+ + G +EE + F MK+ +RP I + ++D L + G
Sbjct: 803 LMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAG 846
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 81/139 (58%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C PD++ YN V+D + G VN + F M + G+ PDF++Y+++++ L K R +D
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ R+M G+ P+ TY LI + TG +E++R+F +M++Q I P + + L+
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+L K GK+ A +F+ M
Sbjct: 332 GSLCKYGKIKEARDVFDTM 350
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 130/274 (47%), Gaps = 4/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+V+ A L + + + I P+ Y+ V+ A + +D + L+ ++
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y N + T + + +E+ + + ++ N ++ + K +I+
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIK 341
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + PD+ +YNI+L+ G + DM + F M G+ P ++N L+
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 401
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
LD +I F EM + G+KP++LTYT +I + R G +++++ FN M Q +
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 461
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEE-MNSSL 273
P Y Y LI G + A + E MN+ +
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 70/240 (29%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N +I A+A ++KA++IF+ ++ KP+++TY V+ L R+G+++D + +F
Sbjct: 394 ICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFN 453
Query: 163 SMKEAGVVP-----------------------------------DFISYNTLLNNLRKIR 187
M + GV P D + +++++NNL K+
Sbjct: 454 QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLG 513
Query: 188 RL-------DL--------------------CLI--------YFREMGESGIKPDLLTYT 212
R+ DL CL+ F M +GI+P+ + Y
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L++ + + G I+E L LF +M Q+ I+PS +Y +ID L + G+ A F EM S
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D + +E+VQ P + + ++ A K+R ++KA +
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P+ TYN ++ G+ + + F M+ ++PD +++N L+ +L K ++
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIK 341
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M G PD+ +Y +++ + G + + LF+ M I P I + LI
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 401
Query: 251 DNLKKMGKVDLAMTIFEEM 269
G +D AM IF EM
Sbjct: 402 KAYANCGMLDKAMIIFNEM 420
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 84/169 (49%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+V ++ + K +I++ L +F + KP I YNI++D L GR +F
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 629
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E+G+ + +Y+ +L L K R D + F+E+ +K D++T +I +T
Sbjct: 630 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 689
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+EE+ LF + + + P + Y +I NL K G V+ A +F M ++
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 7/233 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
+ NGY CK G + + L + + K I P+ YN ++ E + +
Sbjct: 575 LVNGY----CKIGRIDEGLSLFREMLQKGI-KPSTILYNIIIDGLFEAGRTVPAKVKFHE 629
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ S ++ Y+ R + + +E+ + II +N +I ++R+
Sbjct: 630 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 689
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A +F I P ++TY+I++ L + G V + + F+SM+ AG PD N
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 749
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
++ L K + Y ++ E + LT L+D F G E +R
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|296087908|emb|CBI35191.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 97/185 (52%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+V ++ N +I + K +++KA+ +F+ + K P+ +TYN ++ L VGR
Sbjct: 1 MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 60
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ D + F M G +PD ++Y LL+ L K LD + + + S + PD+ YT
Sbjct: 61 LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 120
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ID R G +E++ LF+++ + ++P+++ Y + L K G +D A +F EM+ +
Sbjct: 121 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 180
Query: 274 SDLAG 278
G
Sbjct: 181 CSADG 185
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAF-AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
+F E V P+ +V RI+ + K+ ++KA+ + I+G PD+ Y IV+D
Sbjct: 67 LFREMVACGQIPD--LVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDG 124
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ R G + D + F+++ G+ P+ +YN + + L K LD F EM E+ D
Sbjct: 125 MCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSAD 184
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDM 234
TY + F R +++L +M
Sbjct: 185 GCTYNTITQGFLRNNETSRAIQLLEEM 211
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 82/182 (45%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
+ EE+ + + + N +I +++ A+ +F + PDL+TY I+LD
Sbjct: 30 MYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDY 89
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + ++ + +++ + + PD Y +++ + + L+ F + G+KP+
Sbjct: 90 LCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 149
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ TY + + G ++E+ +LF +M + Y ++ + + A+ + E
Sbjct: 150 VWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLE 209
Query: 268 EM 269
EM
Sbjct: 210 EM 211
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 92/227 (40%), Gaps = 35/227 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I LC G + A+ L + + VA + D+ ++++IL D L
Sbjct: 49 NTLIHGLCHVGRLQDAIALFREM---------------VACGQIPDL-VTYRILLDYLCK 92
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+C+ + A A + + + L P+ I + +I ++ ++E A
Sbjct: 93 ------NCHLDKAMALLKAIEGSNL-----------DPD-IQIYTIVIDGMCRAGELEDA 134
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F ++ KP++ TYNI+ L + G +++ F M E D +YNT+
Sbjct: 135 RDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQG 194
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
+ + EM G D+ T T L+ G +++S++
Sbjct: 195 FLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG-LDQSVK 240
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDL--SFQILKDLL 60
N I CKAG + A ++L+ K F+P+ + + + ND D+ + + + +
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKG-FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + Q L ++++++ I N ++ K +
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A I + C PD+ T+N ++D + ++ + +M G+ PD I+YNTLL
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K R+LD + F+ M E G P+++TY LI+SF + + E++ LF +MK + +
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
P I +LI L G++D A +F
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELF 589
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 135/305 (44%), Gaps = 47/305 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I LC G+++ A+ + +K +I L YN ++ ++ + + Q++KD++
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIIL---YNTLVKGLSKQGLVLQALQLMKDMM- 418
Query: 62 SSRTLSSDCYT-NFARAFIMTDDC-TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S D +T N + C + + + + I N +I + K R +
Sbjct: 419 -EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KA+ I D + PD+ITYN +L+ L + +++++++ F +M E G P+ I+YN L
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLT----------------------------- 210
+ + K R++ + F+EM G+ PD++T
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK 597
Query: 211 -------YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+ +I++F N+ + +LF+ M P Y YR +ID+ K G +DLA
Sbjct: 598 FSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAH 657
Query: 264 TIFEE 268
T E
Sbjct: 658 TFLLE 662
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + Q P+ I+ N++I K ++++ +F + P+L T+NI + L
Sbjct: 203 LFDEMLKQGICPD-ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G +++ S+ G+ PD ISYNTL+ K +L Y +M SG++P+
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY +I+ F + G ++ + ++ D + P + Y SLI+ L G ++ AM +F E
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 113/272 (41%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK GNV + +L + + + PN +N + ID + ++L+ ++
Sbjct: 220 NKLIHVLCKKGNVQESEKLFSKVMKRGV-CPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y F + ++ ++V + N II F K+ ++
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A I PD TY+ +++ L G +N + F E G I YNTL+
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K + L ++M E G PD+ TY +++ + G + ++ + ND +
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P I+ + +LID K +D A+ I + M S
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+ + ++++A+ +F+ + C+P + +YN +++IL G + + MK+ G+ PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145
Query: 173 FISYNT----------------LLNNLR----KIRRLDLCLI---------------YFR 197
++ LLNN+ + + C + F
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM + GI PD+LT+ LI + GN++ES +LF+ + ++ + P+++ + I L + G
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265
Query: 258 KVDLAMTIFEEMNSS 272
+D A + E + S
Sbjct: 266 AIDEAARLLESIVSE 280
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
Query: 69 DCYTNFAR--AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
D YT+ R +F +T T L + + + + +I F K +A +F
Sbjct: 145 DVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLF 204
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D + PD++T+N ++ +L + G V + F+ + + GV P+ ++N + L +
Sbjct: 205 DEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRK 264
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+D + G+ PD+++Y LI F + + E+ + M + P+ + Y
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTY 324
Query: 247 RSLIDNLKKMG 257
++I+ K G
Sbjct: 325 NTIINGFCKAG 335
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+F + + AL + +++ G C+ + ++Y V+ + + + F M + G+ P
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D +++N L++ L K + F ++ + G+ P+L T+ I R G I+E+ RL
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLL 274
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + + P + Y +LI K K+ A +M +S
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 12/212 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA + V +++ +K PN YN ++ + + + + ++ K++
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGC-TPNIITYNILIESFCKDRKVSEAMELFKEM- 557
Query: 61 VSSRTLSSDCYTNFARAFIMT-----DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+R L+ D T + D +L + IE+ + + S + N +I AF
Sbjct: 558 -KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY--STAIFNIMINAFCX 614
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ A +F + G C PD TY +++D + G ++ G+VP F +
Sbjct: 615 KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTT 674
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+LN L RL ++ M ++GI P+
Sbjct: 675 CGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 106/275 (38%), Gaps = 39/275 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK G +S A +L K +P+ +N ++ + ++D + +IL +L
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKGC-IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T Y ++ + +++ +II N +I +F K R++ +A+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRV-----------------------NDMLNE 160
+F +K PD++T ++ L G + N M+N
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611
Query: 161 FA-----SMKE--------AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
F SM E + PD +Y ++++ K +DL + E G+ P
Sbjct: 612 FCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
T +++ T + E++ + N M Q I P
Sbjct: 672 FTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G + +A++LL+ + DK F P+ Y +L + D +L+ +
Sbjct: 350 IHGLCKLGRLGSAMKLLREMEDKG-FAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKG 408
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+++ + Y A + F++E+ I N II+ + Q+E+A
Sbjct: 409 LSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAE 468
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+++ + ITYN ++ L R G D ++ M G D +SYN L+ L
Sbjct: 469 YLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKAL 528
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +D ++ EM E GIKP+ ++Y LI +T + ++L L +M Q++ P I
Sbjct: 529 CRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDI 588
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LI+ L KMG + A+ + E++++
Sbjct: 589 VTYNTLINGLCKMGWMHAALNLLEKLHN 616
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 111/252 (44%), Gaps = 3/252 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I +CK + A+R +Q ++ + + P+ YN ++ N ++ + + ++LL
Sbjct: 417 NGMICAVCKDRRMDDAMRFMQEMKSQG-YKPDICTYNTIIYHLCNNNQMEEAEYLFENLL 475
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y A + + ++V I+ N +I A + ++
Sbjct: 476 HEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVD 535
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+++++ + KP+ ++YN+++ L + RV D L M + PD ++YNTL+
Sbjct: 536 RSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLI 595
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K+ + L ++ + D++TY LI + + ++ L N I
Sbjct: 596 NGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGIT 655
Query: 241 PSIYVYRSLIDN 252
P+ + ++ N
Sbjct: 656 PNERTWGIMVQN 667
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 119/278 (42%), Gaps = 31/278 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSL------RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
I LC G V+ A LL + D N F NDI L L
Sbjct: 214 IHALCAQGGVNEAATLLDEMFLMGCSADVNTF---------------NDIVHGLCTLGRL 258
Query: 60 LVSSRTLSS----DCYTN-FARAFIMTDDCTQLLIFIEEVVQIAS--PE-SIIVVNRIIF 111
++R + C N F++ C L +EE + PE ++++ N +I
Sbjct: 259 REAARLVDRMMIRGCVPNAITYGFLLKGLC--LASQVEEARTMLGRVPELNVVLFNTVIG 316
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
++++A +++ + C PD TY+I++ L ++GR+ + M++ G P
Sbjct: 317 RCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAP 376
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
++Y LL++ + D M + G+ +L Y +I + + +++++R
Sbjct: 377 SIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFM 436
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+MK Q +P I Y ++I +L +++ A +FE +
Sbjct: 437 QEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENL 474
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y A + ++E+ + + N I+ ++ +A + D +
Sbjct: 210 YQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMM 269
Query: 131 GLKCKPDLITYNIVLD-------------ILGRV------------------GRVNDMLN 159
C P+ ITY +L +LGRV G++ +
Sbjct: 270 IRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAE 329
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ +M G PD +Y+ L++ L K+ RL + REM + G P ++TYT L+ SF
Sbjct: 330 LYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFC 389
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
R G + + M + + ++ Y +I + K ++D AM +EM S
Sbjct: 390 RNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKS 441
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 116/290 (40%), Gaps = 40/290 (13%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASA----ETNDIDLSFQILKDLLVSSRTLSSDCY 71
A+ LL L + P+ +YN VL A A T+ + L +++ V T + +
Sbjct: 119 ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFT---F 175
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
+ ARA + L + + + ++ +I A + +A + D +
Sbjct: 176 SIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFL 235
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN--------- 182
+ C D+ T+N ++ L +GR+ + M G VP+ I+Y LL
Sbjct: 236 MGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEE 295
Query: 183 ----LRKIRRLDL---------CLI---------YFREMGESGIKPDLLTYTALIDSFGR 220
L ++ L++ CL+ + MG G PD TY+ LI +
Sbjct: 296 ARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCK 355
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G + +++L +M+ + PSI Y L+ + + G D + E M+
Sbjct: 356 LGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMS 405
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 3/220 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC + A L ++L + + + NA YN ++ A + + D++
Sbjct: 452 NTIIYHLCNNNQMEEAEYLFENLLHEGV-VANAITYNTLIHALLRNGSWQDAISLANDMV 510
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +L Y +A + + ++ + E+ + + + N +I K+R++
Sbjct: 511 LHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVR 570
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + + PD++TYN +++ L ++G ++ LN + V D I+YN L+
Sbjct: 571 DALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILI 630
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ K R L + SGI P+ T+ ++ +F R
Sbjct: 631 SWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670
>gi|302795498|ref|XP_002979512.1| hypothetical protein SELMODRAFT_52562 [Selaginella moellendorffii]
gi|300152760|gb|EFJ19401.1| hypothetical protein SELMODRAFT_52562 [Selaginella moellendorffii]
Length = 419
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 135/274 (49%), Gaps = 8/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G AA +L ++++++ P+ Y+ ++ + + +DI ++ +++
Sbjct: 100 NSLLAVLCKNGRRYAAWKLFLAMKEEDGISPDCVTYSILITNAGDGSDIAEPCRLFLEMM 159
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +++ D Q L F +++ Q P S+ V IIF++ +S +++
Sbjct: 160 DCGCSPDIVVHSSMVNLLFKCGDVRQTLDFFKQMAQRGKPLSVAVFTSIIFSYVRSGRMD 219
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA---SMKEAGVVPDFISYN 177
A L+F +GL+ + I ++ ++D+L+ F+ MK PD ++Y
Sbjct: 220 SAYLLF---RGLRDVSGYVHQRIYNSLICGFANIDDVLHAFSLFKEMKANSFAPDQVTYR 276
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T++ L + +L EM +G+ PDL+TY L+ G TG+ + + +L D++
Sbjct: 277 TMVALLARHAKLFQAQDTLEEMKANGLTPDLVTYNKLMAMLGETGDFKGAFKLLQDLESC 336
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ Y Y +L+ NL + KV A +F+E+ +
Sbjct: 337 GLQADGYTYSALLHNLGRHRKVKTACKLFDELEN 370
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 117/236 (49%), Gaps = 5/236 (2%)
Query: 44 AETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI 103
A +DL+ +++K++ YT+ + ++ E+++Q S+
Sbjct: 2 ARAKRMDLAEELMKEMEEGGNKADFYVYTSLVSGHCQANRPGDAIVHYEQMIQERMEPSL 61
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
++ N +I K+ +++A +F I KP+L+TYN +L +L + GR F +
Sbjct: 62 VIHNMLIDCLGKAGYVDRACSVFQEISKRGLKPELVTYNSLLAVLCKNGRRYAAWKLFLA 121
Query: 164 MKEA-GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
MKE G+ PD ++Y+ L+ N + F EM + G PD++ ++++++ + G
Sbjct: 122 MKEEDGISPDCVTYSILITNAGDGSDIAEPCRLFLEMMDCGCSPDIVVHSSMVNLLFKCG 181
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
++ ++L F M Q+ S+ V+ S+I + + G++D A +F L D++G
Sbjct: 182 DVRQTLDFFKQMAQRGKPLSVAVFTSIIFSYVRSGRMDSAYLLFR----GLRDVSG 233
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 99/243 (40%), Gaps = 1/243 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
L K G+V + + + + L A + ++ + + +D ++ + + L S +
Sbjct: 177 LFKCGDVRQTLDFFKQMAQRGKPLSVAVFTSIIFSYVRSGRMDSAYLLFRGLRDVSGYVH 236
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + F DD +E+ + + ++ A+ ++ +A +
Sbjct: 237 QRIYNSLICGFANIDDVLHAFSLFKEMKANSFAPDQVTYRTMVALLARHAKLFQAQDTLE 296
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+K PDL+TYN ++ +LG G ++ G+ D +Y+ LL+NL + R
Sbjct: 297 EMKANGLTPDLVTYNKLMAMLGETGDFKGAFKLLQDLESCGLQADGYTYSALLHNLGRHR 356
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
++ F E+ G KP +TY A + + ++ M++ + P + Y
Sbjct: 357 KVKTACKLFDELENRGHKPCAMTYNAYVGVLAMADMVNDANEAHRKMRELGLLPDLVTYD 416
Query: 248 SLI 250
LI
Sbjct: 417 ELI 419
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + +R+DL +EM E G K D YT+L+ + +++ + M Q+++ PS
Sbjct: 1 LARAKRMDLAEELMKEMEEGGNKADFYVYTSLVSGHCQANRPGDAIVHYEQMIQERMEPS 60
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ ++ LID L K G VD A ++F+E++
Sbjct: 61 LVIHNMLIDCLGKAGYVDRACSVFQEIS 88
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 62/122 (50%)
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L R R++ M+E G DF Y +L++ + R ++++ +M + ++P
Sbjct: 1 LARAKRMDLAEELMKEMEEGGNKADFYVYTSLVSGHCQANRPGDAIVHYEQMIQERMEPS 60
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
L+ + LID G+ G ++ + +F ++ ++ ++P + Y SL+ L K G+ A +F
Sbjct: 61 LVIHNMLIDCLGKAGYVDRACSVFQEISKRGLKPELVTYNSLLAVLCKNGRRYAAWKLFL 120
Query: 268 EM 269
M
Sbjct: 121 AM 122
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 96/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++++V+ +++ NR+I ++ ++ + A+ +F+ ++ C+PD +TY ++DI
Sbjct: 360 LLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHA 419
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G +N + + M+ AG+ PD +Y+ ++N L K L F EM E G P+L+
Sbjct: 420 KAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLV 479
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N + +L+L+ DM+ P Y +++ L G +D A IF EM
Sbjct: 480 TYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEM 539
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 77/139 (55%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+P ++TYN ++ GR +ND + F M++AG PD ++Y TL++ K L+ +
Sbjct: 369 CQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAM 428
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
++ M +G+ PD TY+ +I+ G+ G++ + +LF +M +Q P++ Y +I
Sbjct: 429 EMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQ 488
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K A+ ++ +M ++
Sbjct: 489 AKARNYQNALKLYRDMQNA 507
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + Q P +++ N +I AK+R + AL ++ ++ +PD +TY+IV+++L
Sbjct: 465 LFCEMIEQGCVP-NLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 523
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G +++ F+ MK VPD Y L++ K ++ +++ M +G+ P++
Sbjct: 524 GHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNV 583
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R + ++ L M + PS+ Y L+
Sbjct: 584 PTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLL 625
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 75 ARAFIMTDDCTQLLIFIEEVVQI--------ASPESIIVVNRIIFAFAKSRQIEK----- 121
AR F+ T +E V QI ++ E+++ +N + A+ ++ +++
Sbjct: 266 ARQFVSTGH------VVENVSQILRQLRWGPSAEEALVNLNCHMDAYQANQVLKQLQDHT 319
Query: 122 -ALLIFDHIKGLKC-KPDLITYNIVLDILGRVGR---VNDMLNEFASMKEAGVVPDFISY 176
AL F +K L K D TY ++ ILGR + +N +L++ M G P ++Y
Sbjct: 320 VALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQ---MVRDGCQPTVVTY 376
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L+++ + L+ + F +M ++G +PD +TY LID + G + ++ ++ M+
Sbjct: 377 NRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQA 436
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P + Y +I+ L K G + A +F EM
Sbjct: 437 AGLSPDTFTYSVMINCLGKAGHLAAADKLFCEM 469
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K+ + A +F + C P+L+TYNI++ + + + L + M+ AG
Sbjct: 449 MINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAG 508
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L LD F EM PD Y L+D +G+ GN+E++
Sbjct: 509 FEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAW 568
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + P++ SL+ ++ ++ A + + M
Sbjct: 569 EWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSM 609
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 129/304 (42%), Gaps = 38/304 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E CK A++LL + DK P+ YN VL + ++ + + LK+L
Sbjct: 208 LEATCKRSGYKQAMKLLDEMHDKGCA-PDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII------------- 110
++ Y + + +EE+ P +++ N +I
Sbjct: 267 CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAM 326
Query: 111 ----------------------FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
AF K ++I KA+ + + C PD+++YN +L L
Sbjct: 327 EVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTAL 386
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G V+ + +K+ G P ISYNT+++ L K + L EM G++PD+
Sbjct: 387 CRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDI 446
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY+ + R IEE++R F ++ IRP+ +Y +++ L K + A+ +F
Sbjct: 447 ITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAY 506
Query: 269 MNSS 272
M SS
Sbjct: 507 MISS 510
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 7/270 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
C I+KLC +G + A R+L + ++ + YN ++ +D + +++ D+ V
Sbjct: 107 CAALIKKLCASGRTADARRVLAA-SGPDVMV---YNAMVAGYCGAGQLDAARRLVADMPV 162
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y R + L +E++ + ++ ++ A K ++
Sbjct: 163 EPDAYT---YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQ 219
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + D + C PD++TYN+VL+ + + GRV D + ++ G P+ +SYN +L
Sbjct: 220 AMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLK 279
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R + EM G P+++T+ LI R G +E ++ + M Q P
Sbjct: 280 GLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTP 339
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y L+ K K+ AM E M S
Sbjct: 340 NSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 121/271 (44%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC G S A+ +L+ + + LP+ Y +L A+ + + + ++L ++
Sbjct: 170 NTLIRGLCGRGRTSNALAVLEDMFRRGC-LPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + F++ + + + N ++ + + E
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + + + C P+++T+N+++ L R G V + M + G P+ +SYN LL
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLL 348
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +++ + + M G PD+++Y L+ + R G ++ ++ L + +K +
Sbjct: 349 HAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCS 408
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y ++ID L K GK A+ + +EM S
Sbjct: 409 PVLISYNTVIDGLTKAGKTKEALELLDEMTS 439
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
++ + ++L+ + T +S Y AF + + F+E +V I+ N
Sbjct: 322 VEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNT 381
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A ++ +++ A+ + +K C P LI+YN V+D L + G+ + L M G
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+Y+T+ + L + R++ + F ++ + GI+P Y A++ + ++
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAI 501
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LF M P+ Y L++ L G V A +F ++ S
Sbjct: 502 DLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCS 544
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKN---IFLPNAYNCVLVASAETNDIDLSFQILKDL 59
N + LC+ G V A+ LL L+DK + + +YN V+ + + ++L ++
Sbjct: 380 NTLLTALCRNGEVDVAIELLHQLKDKGCSPVLI--SYNTVIDGLTKAGKTKEALELLDEM 437
Query: 60 LVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+S+ L D Y+ A D + + +V + + + N I+ K R
Sbjct: 438 --TSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRR 495
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
+ A+ +F ++ C P+ TY I+++ L G V + FA + GVV
Sbjct: 496 ETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN + LCK G A LL + + I PN +YN V++ ++DL+ + +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIG-PNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L ++ Y+ D L + + + +V II K Q
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 119 IEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
KA L+ + I+ + ++YN ++D + G ++ + + M G+ P+ I+Y
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L+N L K R+D L EM G+K D+ Y ALID F + N+E + LF+++ ++
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ PS +Y SLI + +G + A+ ++++M
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 118/266 (44%), Gaps = 2/266 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G S A LL ++ ++ + +YN ++ + ++D + +++ +
Sbjct: 555 INGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + YT+ + Q L +E+ I +I F K +E A
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + P YN ++ +G + L+ + M + G+ D +Y TL++ L
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K L L + EM G+ PD + YT +++ + G + +++F +MK+ + P++
Sbjct: 735 LKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 794
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y ++I + G +D A + +EM
Sbjct: 795 LIYNAVIAGHYREGNLDEAFRLHDEM 820
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 133/275 (48%), Gaps = 3/275 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK +++ A LL+ +++K + +P+ Y V++AS + ++D + ++ ++L
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+++ T+ +D L+ +++ + + + + +I F K+ ++EKAL
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ L P + + ++ + + + L F E G+ F+ NT+L+ L
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC-NTILSWL 453
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + D +M GI P++++Y ++ R N++ + +F+++ ++ ++P+
Sbjct: 454 CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
Y Y LID + A+ + M SS ++ G
Sbjct: 514 YTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNG 548
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 7/243 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G + +AV + + I PN Y ++ + N +D + ++ ++
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGIS-PNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y F + E+++ S + N +I F +
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 121 KALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
AL ++ + GL+C DL TY ++D L + G + + M+ G+VPD I Y
Sbjct: 707 AALDLYKKMLKDGLRC--DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++N L K + + F EM ++ + P++L Y A+I R GN++E+ RL ++M +
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 239 IRP 241
I P
Sbjct: 825 ILP 827
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 95/218 (43%), Gaps = 3/218 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCK + A+ + +++K + L AY ++ + ++++ + + +LL S
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + F + L +++++ + +I K + A ++
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
++ + PD I Y ++++ L + G+ ++ F MK+ V P+ + YN ++ +
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
LD EM + GI PD T+ L+ G+ GN++
Sbjct: 809 NLDEAFRLHDEMLDKGILPDGATFDILVS--GQVGNLQ 844
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
VNR + A + + +A ++ + + D +T +++ R + + L +
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAI 260
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI-KPDLLTYTALIDSFGRTGNI 224
E G PD + Y+ + K L + REM E + P TYT++I + + GN+
Sbjct: 261 ERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++RL ++M I ++ SLI K + A+ +F++M
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 128/276 (46%), Gaps = 2/276 (0%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLR-DKNIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
M N I+ LCK G A+ L+ +R D+ +NC++ + +I+++ ++ ++
Sbjct: 230 MYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEM 289
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + + + + F + Q + + I AF +
Sbjct: 290 ENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNM 349
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
KA+ D + C PD + Y ++ L + GR++D + + +KEAG D + YN L
Sbjct: 350 NKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVL 409
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ- 238
++ K +LD + EM +G+KPD +TY LI F + GN + + + M +++
Sbjct: 410 ISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEG 469
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ P+++ Y +LI +D A+ IF+EMN+ S
Sbjct: 470 LSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVAS 505
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC-----VLVASAETNDIDLSFQILKDLL 60
I KLC++GN + A +L +L N L +A C L + E ++L + +KD+
Sbjct: 124 ISKLCRSGNTNLAWNILDNLMMLN-GLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMN 182
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFI----EEVVQIASPESIIVVNRIIFAFAKS 116
+ ++ N F DD ++ + EE +P++I+ N +I K
Sbjct: 183 IQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMY-NTLIDGLCKV 241
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ E+AL + ++ +C P T+N +++ R G + F M+ A + P+ I+
Sbjct: 242 GRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITL 301
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NTL++ + K R+ + +FR M + G+K + +TYT I++F N+ +++ ++M +
Sbjct: 302 NTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSK 361
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P VY +LI L + G++D A ++ ++ +
Sbjct: 362 DGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA 397
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I + ++I +S A I D++ L D N +L LG+ M
Sbjct: 118 IALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRK 177
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM-GESG-----IKPDLLTYTALIDS 217
MK+ + P I++ L+N+L K RR+D L F +M GE + PD + Y LID
Sbjct: 178 MKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDG 237
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ G EE+L L M+ Q P+ + LI+ + G++++A +F EM ++
Sbjct: 238 LCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENA 292
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 128/310 (41%), Gaps = 51/310 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY C++G + A +L + + I PN N ++ + N I + + + +
Sbjct: 271 NGY----CRSGEIEVAHKLFNEMENAQI-EPNVITLNTLVDGMCKHNRISTAVEFFRVMQ 325
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT F AF ++ + + F++E+ + +V +I A++ +++
Sbjct: 326 QKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLD 385
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYN 177
A + +K D + YN+++ ++ R + LNE M+ AGV PD ++YN
Sbjct: 386 DASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNE---MELAGVKPDSVTYN 442
Query: 178 TLLNNLRKIRRLDLCLIYFREMGE------------------------------------ 201
TL++ KI L + ++M E
Sbjct: 443 TLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNN 502
Query: 202 --SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
S + P+ + Y LIDS + + +L L +DMK + + P+ Y S+ L+ +
Sbjct: 503 VASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWL 562
Query: 260 DLAMTIFEEM 269
D A + + M
Sbjct: 563 DKAFKLMDRM 572
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 6/221 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
L +AG + A ++ L++ L YN ++ + N +D + + L ++ ++
Sbjct: 378 LAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPD 437
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIA--SPESIIVVNRIIFAFAKSRQIEKALLI 125
S Y F + F++++ + SP ++ +I A+ + I++A+ I
Sbjct: 438 SVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSP-TVFTYGALIHAYCLNNNIDEAIKI 496
Query: 126 FDHIKGLKCK--PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F + + K P+ + YNI++D L + +VN L+ MK GV+P+ +YN++ L
Sbjct: 497 FKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKAL 556
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
R LD M E PD +T L + G I
Sbjct: 557 RDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEI 597
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 127 DHIKGLKCK-------PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
D I GL K PD I ++ L R G N N ++ + D N L
Sbjct: 99 DEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNAL 158
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ- 238
L L K R + R+M + I+P ++T+ LI+ + I+++L +F MK ++
Sbjct: 159 LTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKE 218
Query: 239 -----IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P +Y +LID L K+G+ + A+ + +M S
Sbjct: 219 ETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRS 256
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 106/262 (40%), Gaps = 10/262 (3%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVS 62
+I C N++ A+ L + F P+A Y ++ A+ +D + ++ L +
Sbjct: 339 FINAFCNVNNMNKAMEFLDEMSKDGCF-PDAVVYYTLICGLAQAGRLDDASSVVSKLKEA 397
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
L CY F + + ++ E+ + N +I F+K + A
Sbjct: 398 GFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLA 457
Query: 123 LLIFDHI---KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG--VVPDFISYN 177
+ +GL P + TY ++ +++ + F M V P+ + YN
Sbjct: 458 HKFMKKMTEEEGLS--PTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYN 515
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+++L K +++ L +M G+ P+ TY ++ + ++++ +L + M +Q
Sbjct: 516 ILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQ 575
Query: 238 QIRPSIYVYRSLIDNLKKMGKV 259
P L + L +G++
Sbjct: 576 ACNPDYITMEILTEWLSAVGEI 597
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 36/206 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---------- 152
+ +I A+A + + A+L+F ++ CKP LITYN++L++ G++G
Sbjct: 217 VYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLV 276
Query: 153 ----------------------RVNDMLNE----FASMKEAGVVPDFISYNTLLNNLRKI 186
R + E F MK +G PD +++NTLL+ K
Sbjct: 277 HGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKS 336
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
RR + +EM SG P ++TY +LI ++ R G + E++ L + M ++ I+P ++ Y
Sbjct: 337 RRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTY 396
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNSS 272
+L+ +K G + AM IF EM ++
Sbjct: 397 TTLLSGFEKAGMDEPAMRIFGEMRAA 422
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT------NFARAFIMTDDCTQLLI 89
YN ++ A A + + + LKD +V + + D +T F +A + D + I
Sbjct: 361 YNSLISAYARDGLLREAME-LKDQMVE-KGIKPDVFTYTTLLSGFEKAGM---DEPAMRI 415
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F E P +I N +I + + + +F+ I+ C PD++T+N +L + G
Sbjct: 416 FGEMRAAGCKP-NICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFG 474
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G +++ F MK AG VP+ ++NTL++ + + ++ M E+G+ PDL
Sbjct: 475 QNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLS 534
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y A++ + R G E+S ++F +MK + +P+ Y SL+ +++ T+ EE+
Sbjct: 535 SYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEI 594
Query: 270 NSSLSD 275
S L++
Sbjct: 595 YSGLTE 600
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 10 CKAGNV-SAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C+ G++ A ++ + ++ F P+ +N +L ++ + ++LK++ S +
Sbjct: 298 CRRGSLYEEAAQVFEEMKLSG-FSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSP 356
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + A+ + + +++V+ + ++ F K+ E A+ IF
Sbjct: 357 SIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIF 416
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
++ CKP++ T+N ++ + G GR +M+ F ++ PD +++NTLL +
Sbjct: 417 GEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQN 476
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F+EM +G P+ T+ LI ++ R G+ ++++ ++ M + + P + Y
Sbjct: 477 GMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSY 536
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+++ L + G + + +F EM
Sbjct: 537 NAVLAALARGGLWEQSEKVFAEM 559
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 118/253 (46%), Gaps = 10/253 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I + G+ A+ + + + + + P+ +YN VL A A + S ++ ++
Sbjct: 502 NTLISAYSRCGSFQQAMAVYKRMLEAGV-TPDLSSYNAVLAALARGGLWEQSEKVFAEMK 560
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + A+ + + ++ EE+ + +++ ++ +K +
Sbjct: 561 DGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLM 620
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYN 177
+ F+ +K K PDL T N ++ I GR V + N++LN M E+G P +YN
Sbjct: 621 ETEHAFEELKK-KGSPDLSTLNAMIAIYGRRQMVAKANEILN---FMNESGFSPSLATYN 676
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L+ + + +E+ G+KPDL++Y +I ++ R G ++++ R+F+ MK
Sbjct: 677 SLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTY 736
Query: 238 QIRPSIYVYRSLI 250
+ P + Y + +
Sbjct: 737 GLVPDVITYNTFV 749
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP S+ N +++ ++S E++ + I KPDLI+YN V+ R GR+ D
Sbjct: 669 SP-SLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDAS 727
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F+ MK G+VPD I+YNT + + + + R M + G K + TY +++D +
Sbjct: 728 RIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGY 787
Query: 219 GRTGNIEESLRLFNDMKQ 236
+ +++ + + Q
Sbjct: 788 CKHSRRADAIMFVSSLNQ 805
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
VV II K ++ A I ++++ D+ Y ++ GR D + F M
Sbjct: 184 VVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKM 243
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLI--YFREMGESGIKPDLLTYTALIDSFGRTG 222
+E G P I+YN +LN K+ + I M SG+ PD TY LI R
Sbjct: 244 EEEGCKPTLITYNVILNVYGKM-GMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGS 302
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
EE+ ++F +MK P + +L+D K + AM + +EM S
Sbjct: 303 LYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFS 352
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR- 150
EE+ + SP+ + +N +I + + + + KA I + + P L TYN ++ + R
Sbjct: 627 EELKKKGSPD-LSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRS 685
Query: 151 --VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R ++L E + G+ PD ISYNT++ + R+ F M G+ PD+
Sbjct: 686 ENFERSEEVLKEILA---KGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDV 742
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY + S+ E+++ + M + + + Y S++D K + A+
Sbjct: 743 ITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSS 802
Query: 269 MN 270
+N
Sbjct: 803 LN 804
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
+ K++ + D + A+ Q + + +++ + N ++ A A
Sbjct: 485 VFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALA 544
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG---RVGRVNDMLNE-FASMKEAGVV 170
+ E++ +F +K +CKP+ +TY +L + R++ + E ++ + E V
Sbjct: 545 RGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEP--V 602
Query: 171 PDFISYNTLLNNLRKIRRLDLCL---IYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
P + L+N+ + DL + F E+ + G PDL T A+I +GR + ++
Sbjct: 603 PVLLKTLVLVNS-----KCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKA 656
Query: 228 LRLFNDMKQQQIRPSIYVYRSLI 250
+ N M + PS+ Y SL+
Sbjct: 657 NEILNFMNESGFSPSLATYNSLM 679
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDL--SFQILKDLL 60
N I CKAG + A ++L+ K F+P+ + + + ND D+ + + + +
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKG-FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + Q L ++++++ I N ++ K +
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A I + C PD+ T+N ++D + ++ + +M G+ PD I+YNTLL
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K R+LD + F+ M E G P+++TY LI+SF + + E++ LF +MK + +
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
P I +LI L G++D A +F
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELF 589
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 135/305 (44%), Gaps = 47/305 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I LC G+++ A+ + +K +I L YN ++ ++ + + Q++KD++
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIIL---YNTLVKGLSKQGLVLQALQLMKDMM- 418
Query: 62 SSRTLSSDCYT-NFARAFIMTDDC-TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S D +T N + C + + + + I N +I + K R +
Sbjct: 419 -EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KA+ I D + PD+ITYN +L+ L + +++++++ F +M E G P+ I+YN L
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLT----------------------------- 210
+ + K R++ + F+EM G+ PD++T
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK 597
Query: 211 -------YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+ +I++F N+ + +LF+ M P Y YR +ID+ K G +DLA
Sbjct: 598 FSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAH 657
Query: 264 TIFEE 268
T E
Sbjct: 658 TFLLE 662
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + Q P+ I+ N++I K ++++ +F + P+L T+NI + L
Sbjct: 203 LFDEMLKQGICPD-ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G +++ S+ G+ PD ISYNTL+ K +L Y +M SG++P+
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY +I+ F + G ++ + ++ D + P + Y SLI+ L G ++ AM +F E
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK GNV + +L + + + PN +N + ID + ++L+ ++
Sbjct: 220 NKLIHVLCKKGNVQESEKLFSKVMKRGV-CPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T Y F + ++ ++V + N II F K+ ++
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A I PD TY+ +++ L G +N + F E G I YNTL+
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K + L ++M E G PD+ TY +++ + G + ++ + ND +
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P I+ + +LID K +D A+ I + M
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTM 487
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+ + ++++A+ +F+ + C+P + +YN +++IL G + + MK+ G+ PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145
Query: 173 FISYNT----------------LLNNLR----KIRRLDLCLI---------------YFR 197
++ LLNN+ + + C + F
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM + GI PD+LT+ LI + GN++ES +LF+ + ++ + P+++ + I L + G
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265
Query: 258 KVDLAMTIFEEMNS 271
+D A + E + S
Sbjct: 266 AIDEAARLLESIVS 279
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
Query: 69 DCYTNFAR--AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
D YT+ R +F +T T L + + + + +I F K +A +F
Sbjct: 145 DVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLF 204
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D + PD++T+N ++ +L + G V + F+ + + GV P+ ++N + L +
Sbjct: 205 DEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRK 264
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+D + G+ PD+++Y LI F + + E+ + M + P+ + Y
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTY 324
Query: 247 RSLIDNLKKMG 257
++I+ K G
Sbjct: 325 NTIINGFCKAG 335
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+F + + AL + +++ G C+ + ++Y V+ + + + F M + G+ P
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D +++N L++ L K + F ++ + G+ P+L T+ I R G I+E+ RL
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLL 274
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + + P + Y +LI K K+ A +M +S
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA + V +++ +K PN YN ++ + + + + ++ K++
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGC-TPNIITYNILIESFCKDRKVSEAMELFKEM- 557
Query: 61 VSSRTLSSDCYTNFARAFIMT-----DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+R L+ D T + D +L + IE+ + + S + N +I AF +
Sbjct: 558 -KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY--STAIFNIMINAFCE 614
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ A +F + G C PD TY +++D + G ++ G+VP F +
Sbjct: 615 KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTT 674
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+LN L RL ++ M ++GI P+
Sbjct: 675 CGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 106/274 (38%), Gaps = 39/274 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK G +S A +L K +P+ +N ++ + ++D + +IL +L
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKGC-IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T Y ++ + +++ +II N +I +F K R++ +A+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRV-----------------------NDMLNE 160
+F +K PD++T ++ L G + N M+N
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611
Query: 161 FA-----SMKE--------AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
F SM E + PD +Y ++++ K +DL + E G+ P
Sbjct: 612 FCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
T +++ T + E++ + N M Q I P
Sbjct: 672 FTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ + + + ++L I+E+ ++ N II KS +++ A + +
Sbjct: 13 YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD + Y ++D ++G + F M++ +VPDFI+Y ++ L + ++
Sbjct: 73 NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMM 132
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F +M G++PD +TYT LID + ++G +E++ L N M Q + P++ Y +L
Sbjct: 133 EADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALA 192
Query: 251 DNLKKMGKVDLAMTIFEEM 269
D L K+G+VD A + EM
Sbjct: 193 DGLCKLGQVDTANELLHEM 211
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 126/269 (46%), Gaps = 42/269 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY C G + ++L+Q ++ K + PN YN +++ ++ +D + ++L+++
Sbjct: 18 NGY----CLGGELQKVLKLIQEMQMKGL-KPNLYTYNSIILLLCKSGKVDDAERVLREM- 71
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Q P+++ V +I F K I+
Sbjct: 72 ---------------------------------INQGIVPDTV-VYTTLIDGFCKLGNIQ 97
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +FD ++ + PD I Y V+ L R G++ + F M GV PD ++Y TL+
Sbjct: 98 AAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLI 157
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K ++ +M +SG+ P+++TYTAL D + G ++ + L ++M + ++
Sbjct: 158 DGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQ 217
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I Y SL++ L K G + A+ + EEM
Sbjct: 218 LNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 78/136 (57%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+++Y+ V++ G + +L M+ G+ P+ +YN+++ L K ++D
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
REM GI PD + YT LID F + GNI+ + +LF++M++Q+I P Y ++I L +
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 256 MGKVDLAMTIFEEMNS 271
GK+ A +F +M S
Sbjct: 128 CGKMMEADKVFNKMFS 143
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 115/249 (46%), Gaps = 7/249 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK GN+ AA +L + + I +P+ AY V+ + + ++ + S
Sbjct: 87 IDGFCKLGNIQAAYKLFDEMEKQRI-VPDFIAYTAVICGLCRCGKMMEADKVFNKMF--S 143
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R + D YT + + + + ++VQ +++ + K Q++
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDT 203
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + G + ++ TYN +++ L + G + + M+ AG+ PD I++ TL++
Sbjct: 204 ANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMD 263
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K + REM + G++P ++T+ L++ F +G +E+ RL M ++ I P
Sbjct: 264 AYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMP 323
Query: 242 SIYVYRSLI 250
+ Y SL+
Sbjct: 324 NTTTYNSLM 332
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 131/261 (50%), Gaps = 17/261 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK+G V A R+L+ + ++ I +P+ Y ++ + +I ++++ ++ + +
Sbjct: 55 LCKSGKVDDAERVLREMINQGI-VPDTVVYTTLIDGFCKLGNIQAAYKLFDEM--EKQRI 111
Query: 67 SSDCYTNFARAFIMTDDCTQLL----IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
D + + C +++ +F + + P+ + +I + KS ++EKA
Sbjct: 112 VPD-FIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT-LIDGYCKSGEMEKA 169
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRV---NDMLNEFASMKEAGVVPDFISYNTL 179
+ + + P+++TY + D L ++G+V N++L+E G+ + +YN+L
Sbjct: 170 FSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCG---KGLQLNICTYNSL 226
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L K + + EM +G+ PD +T+T L+D++ +TG + ++ L +M + +
Sbjct: 227 VNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGL 286
Query: 240 RPSIYVYRSLIDNLKKMGKVD 260
+P++ + L++ G ++
Sbjct: 287 QPTVITFNVLMNGFCMSGMLE 307
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK G PD +SY+T++N L L +EM G+KP+L TY ++I ++G
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++ R+ +M Q I P VY +LID K+G + A +F+EM
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEM 106
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 118/272 (43%), Gaps = 15/272 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK+G + A L + + PN Y + + +D + ++L ++
Sbjct: 157 IDGYCKSGEMEKAFSLHNQMVQSGL-TPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L+ Y + + + Q + +EE+ I ++ A+ K+ ++ KA
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL--- 180
+ + +P +IT+N++++ G + D A M E G++P+ +YN+L+
Sbjct: 276 ELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQY 335
Query: 181 ---NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
NN+R + ++ M G+ PD TY LI + N++E+ L +M ++
Sbjct: 336 CIRNNMRCTTEI------YKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEK 389
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y S+I K K+ A +FEEM
Sbjct: 390 GFNLTASSYNSIIKGFFKKKKISEARELFEEM 421
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 115/263 (43%), Gaps = 5/263 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCK G V A LL + K + L YN ++ ++ +I + ++++++ V+
Sbjct: 195 LCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPD 254
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA--LLI 125
+ +T A+ T + + + E++ ++I N ++ F S +E LL
Sbjct: 255 TITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLA 314
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ KG+ P+ TYN ++ + + M GV+PD +YN L+ K
Sbjct: 315 WMLEKGIM--PNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
R + +EM E G +Y ++I F + I E+ LF +M+++ + +
Sbjct: 373 ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEI 432
Query: 246 YRSLIDNLKKMGKVDLAMTIFEE 268
Y +D G ++ A+ + +E
Sbjct: 433 YNLFVDISYGEGNMETALELCDE 455
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 149/305 (48%), Gaps = 38/305 (12%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN I+ LCK + A +LQ + D++I +PN YN ++ + + +ILK++
Sbjct: 159 CNSVIDGLCKVQAMDKAEAVLQQMIDEHI-MPNCTTYNSLIHGYLSSGQWTEAVRILKEM 217
Query: 60 L-------VSSRTLSSDC-------------YTNFARAFIMTDDCTQ---LLIFIEE--V 94
V + + DC + + ++ D T L + E +
Sbjct: 218 SRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNL 277
Query: 95 VQIASPESIIVVNRI----------IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
V++ + + ++V N + I+A+ K ++++A L F ++ L PD++TY V
Sbjct: 278 VEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTV 337
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+D L ++GR++D ++ F M + G+ P+ I++ TL++ + + F EM + GI
Sbjct: 338 IDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGI 397
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD+ +TA+ID + G + E+ +LF+ M + +P++ Y ++I G+V M
Sbjct: 398 PPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMK 457
Query: 265 IFEEM 269
+ ++M
Sbjct: 458 LLDDM 462
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVSS 63
I K G+V A L + D I PN C V+ + +D + +L+ ++
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGI-PPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + ++ + T+ + ++E+ + +++ N +I KS +A
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + KPD TY +L G + +M N M + G+ + +++ +
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RLD + F +M + G PD++TYT +ID + G +++++ F M + P+I
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI GK + A +F EM
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEM 392
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C PD+++Y+ V+ + G V F M + G+ P+ ++ N++++ L K++ +D
Sbjct: 114 GDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 173
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++M + I P+ TY +LI + +G E++R+ +M + RP++ Y LI
Sbjct: 174 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLI 233
Query: 251 DNLKKMGKVDLAMTIFEEMNSSLSDLAGPK 280
D L K G A IF M S GPK
Sbjct: 234 DCLCKSGFHAEAREIFNSMIQS-----GPK 258
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 20/155 (12%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP +II +I F+ + EKA +F + PD+ + ++D L + G+V +
Sbjct: 363 SP-NIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQ 421
Query: 159 NEFASMKEAGVVPDFISYNTLLNN------LRKIRRL--DLCLIYFRE-----------M 199
F M AG P+ +SYNT+++ + ++ +L D+ LI + M
Sbjct: 422 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 481
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
G+KPD+ T LIDS G IE+ L LF +M
Sbjct: 482 VSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREM 516
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 99/184 (53%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
++ + E+VQ +++ I+ AF K+R++ A I + + C P+++T+ ++
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
G+V+D L+ + M + G P ISYN L+ L I L L +F M + +
Sbjct: 300 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 359
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+ TY+ L+D F G+++ ++ ++N+MK +P++ VY ++ID L K D A ++
Sbjct: 360 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 419
Query: 266 FEEM 269
++M
Sbjct: 420 IDKM 423
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 4/264 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+ +CK G V A L + + + +YN V+ A + F ++ +++
Sbjct: 199 VSGMCKLGRVEEARGFLA----ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQ 254
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ YT AF + + +V + +++ ++ F + ++ AL +
Sbjct: 255 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 314
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + P I+YN+++ L +G + L+ F SMK ++P+ +Y+TL++
Sbjct: 315 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSN 374
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
LD ++ + EM SG KP+++ YT +ID + +++ L + M P+
Sbjct: 375 AGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVT 434
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI L G+V A+ +F M
Sbjct: 435 FNTLIGRLCDCGRVGRALNVFHGM 458
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC G++ A+ S++ +N LPNA Y+ ++ + D+D + I ++
Sbjct: 331 NVLIRGLCCIGDLKGALDFFNSMK-RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 389
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + YTN Q I++++ P + + N +I ++
Sbjct: 390 SSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVG 449
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL +F ++ C P+ TYN +L L R G D M G ++YNT++
Sbjct: 450 RALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVI 509
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L ++ ++ M GI+PD T+ A+I ++ + G + + L M
Sbjct: 510 NCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCP 569
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y LI L GK+ AM +M
Sbjct: 570 RNVVAYTILISELCNQGKLSNAMVYLLKM 598
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK-PDLITYNIVLDILGRVGRVN 155
+A E +V I AFA++ ++AL F L C+ P + YN +LD L R V
Sbjct: 82 VACTEDALVA--AIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVG 139
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ + +M++AGV P+ +YN L+ L + R+D EM G PD +++ ++
Sbjct: 140 AVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIV 199
Query: 216 DSFGRTGNIEES------------------------LRLF------NDMKQQQIRPSIYV 245
+ G +EE+ R++ N+M Q+ ++P++
Sbjct: 200 SGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVT 259
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +++D K ++ +A I M S
Sbjct: 260 YTTIVDAFCKARELRMACAILARMVS 285
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV-PDFISYNTLLNNLRKIR 187
++G+ C D + I R G + L F + G P YN LL+ L +
Sbjct: 79 LRGVACTEDALVAAI--GAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLREN 136
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+ + + M ++G+ P++ TY LI + + ++ + ++ ++M ++ P +
Sbjct: 137 MVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHG 196
Query: 248 SLIDNLKKMGKVDLAMTIFEE 268
+++ + K+G+V+ A E
Sbjct: 197 TIVSGMCKLGRVEEARGFLAE 217
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S++ N +I + + A+L+ + +PD T+N ++ + G+V+
Sbjct: 501 SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 560
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS-FGR 220
M + ++Y L++ L +L ++Y +M GI P+ T+ L+ + F
Sbjct: 561 GQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620
Query: 221 TGNI 224
G I
Sbjct: 621 IGTI 624
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 130/259 (50%), Gaps = 7/259 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I CK G V AVR+ + + + +PN YN ++ + ++ +++I+K +
Sbjct: 329 NVFIHGYCKVGRVRDAVRVFDEMCREGV-VPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T + Q ++ ++V+ + +I SR++
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMG 447
Query: 121 KAL-LIFD-HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+A+ L+ D H+K L P ++TY+ ++D L R GR+++ M G +PD I+Y+
Sbjct: 448 EAMNLLRDMHLKNLV--PHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI 505
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K + LD + F +M + G++PD++ YT +ID + ++ I+E++ LF +M +
Sbjct: 506 LLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKN 565
Query: 239 IRPSIYVYRSLIDNLKKMG 257
+ P I Y L + + K G
Sbjct: 566 LVPDIVTYTILFNAVFKSG 584
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N I + K ++ A+ +FD + P+++TYN ++D L + G V+
Sbjct: 325 VWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVK 384
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+M +G+ PD ++ LL+ L K +RLD ++ F ++ ESG+ PD+ +YT LI +
Sbjct: 385 TMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSR 444
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ E++ L DM + + P I Y LID L + G++ A + EM+
Sbjct: 445 RMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMH 492
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAET--NDIDLSFQILKDLLVSS 63
I+ LCK G + A + + ++ + PN C + ++D++ ++ +
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRG-YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + +E+ + +I+ N +I K+ ++ A
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + PD++T I+LD L + R++ + F + E+G+ PD SY L++
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
RR+ + R+M + P ++TY+ LID R+G I + RL N+M + P
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D L K +D A+ +F +M
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQM 526
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 115/248 (46%), Gaps = 7/248 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N I+ LCKAG VS A +++++ + P+ C ++ ++ +D + + L+
Sbjct: 364 NSLIDCLCKAGEVSGAWEIVKTMHRSGL-TPDIVTCCILLDGLCKSKRLDQAILLFNQLV 422
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T YT + + + + ++ I+ + +I +S +I
Sbjct: 423 ESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRIS 482
Query: 121 KALLIFD--HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A + + H+KG PD ITY+I+LD L + +++ + F M + G+ PD + Y
Sbjct: 483 NAWRLLNEMHVKGPL--PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTI 540
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K R+D + FREM + PD++TYT L ++ ++G+ + N ++
Sbjct: 541 MIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDIN 600
Query: 239 IRPSIYVY 246
P + Y
Sbjct: 601 PPPRVLKY 608
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 121/277 (43%), Gaps = 11/277 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA---------YNCVLVASAETNDIDLSFQIL 56
I LC+ G V+ AV LL+ + + + Y+ V+ +D F+
Sbjct: 149 INGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFY 208
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+++ + + Y + R + ++E+++ S+ V +I K+
Sbjct: 209 NEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKN 268
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGVVPDFIS 175
+ +A +FD + +P+++T ++ G V DM E F ++ E G D +
Sbjct: 269 GMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNV-DMARELFDAIGEWGFKRDVWT 327
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN ++ K+ R+ + F EM G+ P+++TY +LID + G + + + M
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + P I L+D L K ++D A+ +F ++ S
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVES 424
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC +S A + +++R+ + LPN YN ++ + + + ++ ++L
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGM-LPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG 293
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + TD+ F+ ++ +I V N +I + K+ + +AL
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ I+ + PD+ TY+I++ L V R+ + MK+ G +P+ ++YNTL++
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + +M E GI+P+++T++ LID + + G +E ++ L+ +M + + P +
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LID K G A + +EM +
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 109/236 (46%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
A N VL + D +++ D++ + + Y D + +E
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+++ ++++ +I +I +A +F ++ P+L TYN ++D ++
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V L + M G++P+ +++ L++ L K + + +M G+ P++ Y
Sbjct: 279 VKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LID + + GN+ E+L L +++++ +I P ++ Y LI L + +++ A + +EM
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
+ +++ +G V + L + M V+P + N +L+ L K R D + +M
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
G P+++TY LID R G+ ++ RLF++M +++I P++ +Y LI L ++
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 261 LAMTIFEEMNSS 272
A ++F M +S
Sbjct: 246 EAESMFRTMRNS 257
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 125/284 (44%), Gaps = 28/284 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC + A LLQ ++ K FLPNA YN ++ + +++ + ++ + +
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKG-FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM--TE 431
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + + T + +A M + ++ E V++ P+ ++ +I K
Sbjct: 432 KGIEPNIITFSTLIDGYCKAGKME---AAMGLYTEMVIKGLLPD-VVAYTALIDGHFKDG 487
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS-------------M 164
++A + ++ P++ T + ++D L + GR++D + F + +
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNEL 547
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ P+ + Y L+ L R+ +F +M SG++PD+ T +I R ++
Sbjct: 548 DRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHL 607
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ + L D+ + I P+ VYR L ++ G + A++ E
Sbjct: 608 RDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE 651
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ-IEKAL 123
T +C++++ AF + LL + +++ SP I+ ++ F K Q KAL
Sbjct: 679 TEKKECHSSYLTAFGIHS--FVLLWYFHTILKPPSPHEIL--KKVPFIGQKGDQRPNKAL 734
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ +PD++T + L +G ++ A ++ G+ D N+L+N
Sbjct: 735 QLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMY 794
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K + R + + K D+ T+T++I G EE+L+LF +MK+ R
Sbjct: 795 SKCGEIGTA----RRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKR 847
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 2/239 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTD-DCTQLLIFIEEV 94
YN ++ A A + + ++ ++ L YT F+ D + + +F E
Sbjct: 177 YNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMR 236
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
P +I N +I + + + +F+ IK C PD++T+N +L + G+ G
Sbjct: 237 AAGCKP-NICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMD 295
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+++ F MK AG VP+ +YNTL++ + D + ++ M E+GI PDL TY A+
Sbjct: 296 SEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAV 355
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ + R G E+S ++F +MK + +P+ Y SL+ ++ + + EE+ S +
Sbjct: 356 LAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGV 414
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 36/206 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR-VNDMLNEF 161
+ +I A + + +A+++F ++ CKP LITYN++L++ G++G N + F
Sbjct: 33 VYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLF 92
Query: 162 ASMKEAGV-----------------------------------VPDFISYNTLLNNLRKI 186
MK AGV VPD ++YN LL+ K
Sbjct: 93 EGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKS 152
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
RR + REM +G P ++TY +LI ++ R G ++E++ L N M + I ++ Y
Sbjct: 153 RRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTY 212
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNSS 272
+L+ + GK + AM +F EM ++
Sbjct: 213 TTLLSGFVRAGKDESAMRVFAEMRAA 238
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I + E+A +F +K + PD +TYN +LD+ G+ R + + M+
Sbjct: 108 NTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEV 167
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G P ++YN+L++ + L + +M E GI D+ TYT L+ F R G E
Sbjct: 168 NGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDES 227
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++R+F +M+ +P+I + +LI GK M +FEE+ +S
Sbjct: 228 AMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNS 273
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N ++ + KSR+ ++A+ + ++ C P ++TYN ++ R G + + +
Sbjct: 140 VTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQ 199
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E G+ D +Y TLL+ + + + + F EM +G KP++ T+ ALI G G
Sbjct: 200 MVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGK 259
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E +++F ++K P I + +L+ + G +F+EM
Sbjct: 260 FAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 305
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 116/253 (45%), Gaps = 9/253 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I + G+ A+ + + + + I P+ YN VL A A + S +I ++
Sbjct: 318 NTLISAYSRCGSFDQAMDIYKRMLEAGI-TPDLSTYNAVLAALARGGLWEQSEKIFAEMK 376
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + A+ + ++L EE+ +++ ++ +K +
Sbjct: 377 DGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLV 436
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYN 177
+A + F +K PDL T N +L I GR + N++LN M E+G P +YN
Sbjct: 437 EAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILN---FMNESGFTPSLATYN 493
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L+ + + +E+ GIKPD ++Y +I ++ R G ++E+ R+F++M++
Sbjct: 494 SLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRES 553
Query: 238 QIRPSIYVYRSLI 250
+ P + Y + +
Sbjct: 554 GLVPDVITYNTFV 566
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N +++ ++S E++ + I KPD I+YN V+ R GR+ + F
Sbjct: 488 SLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIF 547
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+E+G+VPD I+YNT + + + + R M + G KP+ TY +++D + +
Sbjct: 548 SEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKH 607
Query: 222 GNIEESLRLFNDMKQQQIRPSI 243
+ ++++ + + ++ P I
Sbjct: 608 NHRDDAIMFISSL--HELDPHI 627
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+++ +LG+ G+V+ + + + G D +Y +L+ R ++ F++M E
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLR-LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G KP L+TY +++ +G+ G ++ LF MK + P Y Y +LI ++ +
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEE 122
Query: 262 AMTIFEEMNS 271
A +F++M S
Sbjct: 123 AAAVFKDMKS 132
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 12/249 (4%)
Query: 31 FLP--NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQL- 87
F+P + YN ++ A + D + I K +L + T Y A Q
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSE 369
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
IF E P + + ++ A+A ++I + L + + I C + + ++L
Sbjct: 370 KIFAEMKDGRCKPNELTYCS-LLHAYANGKEIGRMLALAEEI----CSGVIEPHAVLLKT 424
Query: 148 LGRVGRVNDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
L V D+L E F +K G PD + N +L+ + + M ESG
Sbjct: 425 LVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESG 484
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
P L TY +L+ R+ N E S + ++ + I+P Y ++I + G++ A
Sbjct: 485 FTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEAS 544
Query: 264 TIFEEMNSS 272
IF EM S
Sbjct: 545 RIFSEMRES 553
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++E++ I N +IFA+ ++ ++++A IF ++ PD+ITYN +
Sbjct: 512 LKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAA 571
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
D ++ M + G P+ +YN++++ K D +++ + E
Sbjct: 572 DSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHE 622
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
++ CK GN+ A L + ++ + P+ AY +V + D +F + +++L
Sbjct: 418 FVRGFCKMGNLPMAKELFDEMLNRGL-QPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 476
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
Y F + + +++++ + II A + + KA
Sbjct: 477 GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA 536
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F + P ++TY +++ GR+ + F M E GV P+ I+YN L+N
Sbjct: 537 RALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING 596
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K+R++D +F EM GI P+ TYT LI+ G+ +E+LRL+ DM ++I+P
Sbjct: 597 LCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 656
Query: 243 IYVYRSLIDNLKK 255
+RSL+ +L K
Sbjct: 657 SCTHRSLLKHLNK 669
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G V A++LL ++ PN YN ++ + + +++ + ++++D+L
Sbjct: 206 NTMLDSFCKKGMVQEALQLLFQMQAMGCS-PNDVTYNVLVNGLSHSGEMEQAKELIQDML 264
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S Y R + + EE++ + +++ N I++ K ++
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVS 324
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + D + PDL++YN ++ R+G + + FA ++ + P ++YNTL+
Sbjct: 325 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLI 384
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L ++ LD+ + EM + G PD+ T+T + F + GN+ + LF++M + ++
Sbjct: 385 DGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQ 444
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y + I K+G A + EEM
Sbjct: 445 PDRFAYITRIVGELKLGDPSKAFGMQEEM 473
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 17/278 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I + GN+ A L LR +++ P+ YN ++ D+D++ ++ +++
Sbjct: 346 NTLIYGYTRLGNIGEAFLLFAELRYRSL-APSVVTYNTLIDGLCRLGDLDVAMRLKDEMI 404
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIA-SPESIIVVNRIIFAFAKSRQI 119
+T F R F + +E++ P+ + RI+ K
Sbjct: 405 KHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDP 463
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
KA + + + PDLITYN+ +D L ++G + + M G+VPD ++Y ++
Sbjct: 464 SKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSI 523
Query: 180 LN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++ +LRK R L F EM GI P ++TYT LI S+ G ++ ++ F +
Sbjct: 524 IHAHLMAGHLRKARAL------FLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFE 577
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ + P++ Y +LI+ L K+ K+D A F EM +
Sbjct: 578 MHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQA 615
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 113/235 (48%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN +L + + + + Q+L + + + Y + + Q I+++
Sbjct: 204 TYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDM 263
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+++ S+ + +I + + QIE+A + + + P ++TYN ++ L + GRV
Sbjct: 264 LRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRV 323
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+D M ++PD +SYNTL+ ++ + + F E+ + P ++TY L
Sbjct: 324 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTL 383
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ID R G+++ ++RL ++M + P ++ + + + KMG + +A +F+EM
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEM 438
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 9/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G VS A +LL + +KN+ +P+ +YN ++ +I +F + +L
Sbjct: 311 NTIMYGLCKWGRVSDARKLLDVMVNKNL-MPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 369
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S S Y D + +E+++ + + F K +
Sbjct: 370 YRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLP 429
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA---GVVPDFISYN 177
A +FD + +PD Y + I+G + ++ D F +E G PD I+YN
Sbjct: 430 MAKELFDEMLNRGLQPDRFAY--ITRIVGEL-KLGDPSKAFGMQEEMLARGFPPDLITYN 486
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++ L K+ L ++M +G+ PD +TYT++I + G++ ++ LF +M +
Sbjct: 487 VFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSK 546
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I PS+ Y LI + G++ LA+ F EM+
Sbjct: 547 GIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 579
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+++ P ++++ +++ + K +EK LL+F + PD+ N VL +L
Sbjct: 124 EVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNI 183
Query: 156 DMLNE-FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D+ E + M E G+ P ++YNT+L++ K + L +M G P+ +TY L
Sbjct: 184 DVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVL 243
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ +G +E++ L DM + + S+Y Y LI + G+++ A + EEM S
Sbjct: 244 VNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLS 300
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 84/191 (43%), Gaps = 3/191 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I+ L K GN+ A L++ + N +P+ Y ++ A + + + ++L
Sbjct: 486 NVFIDGLHKLGNLKEASELVKKML-YNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S YT ++ + ++ E+ + ++I N +I K R+++
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 604
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A F ++ P+ TY I+++ +G + L + M + + PD ++ +LL
Sbjct: 605 QAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLL 664
Query: 181 NNLRKIRRLDL 191
+L K +L +
Sbjct: 665 KHLNKDYKLHV 675
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 129/263 (49%), Gaps = 5/263 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G + AV +L + ++ PN YN ++ + N ++ + ++ + +L
Sbjct: 341 NSLISGLCKLGEIDEAVEILHHMVSRDC-EPNTVTYNTLIGTLCKENHVEAATELAR-VL 398
Query: 61 VSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S L C + + + +T + + EE+ + + +I + R++
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++AL++ ++ C +++ YN ++D L + RV D + F M+ GV ++YNTL
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTL 518
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L K +R++ +M G+KPD TYT ++ F + G+I+ + + +M
Sbjct: 519 INGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGC 578
Query: 240 RPSIYVYRSLIDNLKKMGKVDLA 262
P I Y +LI L K G+VD+A
Sbjct: 579 EPDIVTYGTLIGGLCKAGRVDVA 601
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N +I K +I++A+ I H+ C+P+ +TYN ++ L + V
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ GV+PD ++N+L+ L ++ + F EM E G PD TY+ LI+S
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSER 456
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E+L L +M+ ++ VY +LID L K +V A IF++M
Sbjct: 457 RLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQM 503
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 10/269 (3%)
Query: 19 VRLLQSLRDKNIF--LP---NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTN 73
++L+++L K + +P + +N ++ A + + + + +L+D+ +T
Sbjct: 180 LKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTT 239
Query: 74 FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK 133
+ FI D L E +V+ + + VN ++ K +IE+AL +G
Sbjct: 240 LMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGF- 298
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C PD +T+N +++ L R G + L M E G D +YN+L++ L K+ +D +
Sbjct: 299 C-PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAV 357
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
M +P+ +TY LI + + ++E + L + + + P + + SLI L
Sbjct: 358 EILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGL 417
Query: 254 KKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
++AM +FEEM D P +F
Sbjct: 418 CLTSNREIAMELFEEMKEKGCD---PDEF 443
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 124/272 (45%), Gaps = 5/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCKA + A+ +L+ + + + P+ + ++ E D++ + +I + ++
Sbjct: 203 NILIRALCKAHQLRPAILMLEDMPNYGL-RPDEKTFTTLMQGFIEEADVEGALRIKELMV 261
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S L+S + L FI E + + N ++ ++ I+
Sbjct: 262 ESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQ--VTFNALVNGLCRTGHIK 319
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ L + D + + D+ TYN ++ L ++G +++ + M P+ ++YNTL+
Sbjct: 320 QGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLI 379
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K ++ R + G+ PD+ T+ +LI T N E ++ LF +MK++
Sbjct: 380 GTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCD 439
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y LI++L ++ A+ + +EM S
Sbjct: 440 PDEFTYSILIESLCSERRLKEALMLLKEMELS 471
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 114/273 (41%), Gaps = 8/273 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC N A+ L + +++K P+ Y+ ++ + + + +LK++
Sbjct: 411 NSLIQGLCLTSNREIAMELFEEMKEKGCD-PDEFTYSILIESLCSERRLKEALMLLKEME 469
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S + Y + +++ + S + N +I KS+++E
Sbjct: 470 LSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVE 529
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D + KPD TY +L + G + + +M G PD ++Y TL+
Sbjct: 530 EAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLI 589
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K R+D+ R + G+ Y +I + + +E++RLF +M ++
Sbjct: 590 GGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDP 649
Query: 241 PSIYVYRSLIDNLKKMG-----KVDLAMTIFEE 268
P + Y+ + L G VD + + E+
Sbjct: 650 PDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK 682
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
KPD YN+ L +L + ++ + + M V PD ++N L+ L K +L ++
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+M G++PD T+T L+ F ++E +LR+ M + + L++ L
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLC 280
Query: 255 KMGKVDLAMT-IFEE 268
K G+++ A+ I+EE
Sbjct: 281 KEGRIEEALRFIYEE 295
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 2/175 (1%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + ++ A++ + L + + K D T+ I L+ ++ +N +
Sbjct: 94 VFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLL 153
Query: 165 KEA--GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E V PD YN L+ L K +L L +M + PD+ T+ LI + +
Sbjct: 154 MERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAH 213
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ ++ + DM +RP + +L+ + V+ A+ I E M S +L
Sbjct: 214 QLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELT 268
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 10/187 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK+ V A +L+ + + + P+ Y +L + DI + I++++
Sbjct: 516 NTLINGLCKSKRVEEAAQLMDQMIMEGL-KPDKFTYTTMLKYFCQQGDIKRAADIVQNMT 574
Query: 61 VSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ Y D ++LL ++ + +P++ N +I A K +
Sbjct: 575 LNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQA---YNPVIQALCKRK 631
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVL-DILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ ++A+ +F + PD+ITY IV + G + + ++ M E G++P+F S+
Sbjct: 632 RTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSF 691
Query: 177 NTLLNNL 183
L L
Sbjct: 692 GFLAEGL 698
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G V AV++ + K P A YN ++ + +D + ++
Sbjct: 228 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 287
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y A M T+ +EE+ + N +I K ++KAL
Sbjct: 288 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKAL 347
Query: 124 LIFDHI--KGLKC---------------------------------KPDLITYNIVLDIL 148
IF+++ +G++ +PDL+ YN +++
Sbjct: 348 EIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSH 407
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G ++ M++ + PD ++YNTL+ L + R+D EM + GI+PDL
Sbjct: 408 STSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDL 467
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY LI + G+++++LR+ N+M + P++ Y +LI L K G+ D A + +E
Sbjct: 468 VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 527
Query: 269 M 269
M
Sbjct: 528 M 528
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 123/273 (45%), Gaps = 19/273 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+ LC AG + A+ LL+ + N YN V+ + + I++++ R
Sbjct: 161 LRHLCSAGKPARALELLRQMPRPNAV---TYNTVIAGFCSRGRVQAALDIMREM----RE 213
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQI---------ASPESIIVVNRIIFAFAKS 116
+ +++ C + ++E V++ PE+++ N +I +
Sbjct: 214 RGGIAPNQYTYGTVISGWCK--VGRVDEAVKVFDEMLTKGEVKPEAVMY-NALIGGYCDQ 270
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++ ALL D + + TYN+++ L GR + M G+ D +Y
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L+N K + L F M G++ ++TYT+LI + + G ++E+ +LF++ +
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ IRP + +Y +LI++ G +D A I EM
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 1/249 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ L G + A L++ + K + L YN ++ + ++ + +I +++
Sbjct: 299 VHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 358
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT+ A + +E V+ +++ N +I + + S I++A
Sbjct: 359 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 418
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I ++ + PD +TYN ++ L +GRV++ M + G+ PD ++YNTL++
Sbjct: 419 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYS 478
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ L EM G P LLTY ALI + G +++ + +M + I P
Sbjct: 479 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 538
Query: 245 VYRSLIDNL 253
Y SLI+ L
Sbjct: 539 TYISLIEGL 547
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 116/235 (49%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN +L E ++ + + + ++ T S Y N + ++ +
Sbjct: 431 TYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI 490
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
++ + + +I F K E+A ++F+ + P T+N V++ LG+ GRV
Sbjct: 491 LERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRV 550
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
++ ++ + + G V I+YN++++ K +D L+ +REM ESGI PD++TYT+L
Sbjct: 551 SETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSL 610
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ID ++ I +L + +DMK + ++ + Y +LID KM ++ A F E+
Sbjct: 611 IDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTEL 665
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 134/290 (46%), Gaps = 37/290 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ +C+ +++ A LL+ +R+ ++P+ Y V+VA + + + ++ +++
Sbjct: 262 VQAVCRRLDLNLACELLKEMREFG-WVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVG 320
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ + + + + D L +EVV+ +++ + +I +K +EKA
Sbjct: 321 LPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAY 380
Query: 124 LIFDHIKGLKCKPDL----------------------------------ITYNIVLDILG 149
++ +K + +P++ +TYNI+L LG
Sbjct: 381 ELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLG 440
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+G+VN+ N + M G+ P +SYN L+ K +D + + E G+KP+ +
Sbjct: 441 ELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAV 500
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
TYT LID F + G+ E + +F M I P+ + + ++I+ L K G+V
Sbjct: 501 TYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRV 550
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + A +L+S+ ++ + PNA Y ++ + D + +F + + ++
Sbjct: 468 NNLILGHCKKGCMDKAYSMLKSILERGL-KPNAVTYTLLIDGFFKKGDSERAFVVFEQMM 526
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ + + T ++ + ++ + I N II F K ++
Sbjct: 527 AANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVD 586
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
ALL + + PD+ITY ++D L + ++ L + MK G+ D ++Y+ L+
Sbjct: 587 SALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALI 646
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K+ ++ +F E+ + G+ P+ + Y ++I F N+E +L L +M + ++
Sbjct: 647 DGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVP 706
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ VY S+I L K GK+ LA+ ++ EM
Sbjct: 707 CDLQVYTSIIGGLLKEGKLSLALDLYSEM 735
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AY+ ++ A D++L+ ++LK++ S YT A + + + L +E+
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V + P ++IV ++ + + AL +FD + PD++ ++++++ +VG +
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ MK G+ P+ N+LL + L+ F E E GI +++TY L
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNIL 435
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G G + E+ L+ M + I PS+ Y +LI K G +D A ++ + +
Sbjct: 436 LKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI 490
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 8/265 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G V +A+ + + + I P+ Y ++ ++N I L+ ++ D+
Sbjct: 573 NSIIDGFFKEGAVDSALLAYREMCESGIS-PDVITYTSLIDGLCKSNKIGLALEMHSDMK 631
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y+ F D F E++ I + +V N +I F +E
Sbjct: 632 YKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNME 691
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + K DL Y ++ L + G+++ L+ ++ M +VPD + Y L+
Sbjct: 692 AALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLI 751
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L +L+ +EM + I P +L Y LI R GN++E+ RL ++M + +
Sbjct: 752 NGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLV 811
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTI 265
P Y L++ GK+ ++ T+
Sbjct: 812 PDDTTYDILVN-----GKLKVSHTL 831
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 120/268 (44%), Gaps = 1/268 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ K G+ A + + + NI + +N V+ +T + + L + +
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGF 565
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+S Y + F L+ E+ + +I +I KS +I AL
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALE 625
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ +K K D++ Y+ ++D ++ + F + + G+ P+ + YN++++
Sbjct: 626 MHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFI 685
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++ L +EM ++ + DL YT++I + G + +L L+++M + I P I
Sbjct: 686 HLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIV 745
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y LI+ L G+++ A I +EM+ +
Sbjct: 746 MYTVLINGLSNNGQLENASKILKEMDGN 773
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ + +I F K +E A F + + P+ + YN ++ + + LN
Sbjct: 639 VVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQ 698
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + V D Y +++ L K +L L L + EM I PD++ YT LI+ G
Sbjct: 699 EMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNG 758
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E + ++ +M I PS+ VY LI + G + A + +EM
Sbjct: 759 QLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEM 805
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ ++N ++ A + + A ++D + D T ++V+ + G+ ++ F
Sbjct: 185 VPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFK 244
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI--YFREMGESGIKPDLLTYTALIDSFGR 220
K G+ D +Y+ L+ + RRLDL L +EM E G P TYTA+I + +
Sbjct: 245 EAKGRGLEVDAAAYSILVQAV--CRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVK 302
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
GN E+LRL ++M + ++ V RSL+ +G V+LA+ +F+E+
Sbjct: 303 QGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEV 351
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G V A +LL S + + P YN +L + D + +L ++L
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSFSSRGM-EPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T ++ Y D+ + +E+ + ++ + +I A++ +
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL+ F ++ PD + Y I++D R G ++D L M G D ++YNT L
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K + + F EM E G+ PD T+T LI + + GN++++L LF M + ++
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +LID K G++ A ++++M
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G A +L + + PNA YN +LV ++I + +I ++
Sbjct: 331 NAILYGLCKIGKYDRAKDVLIEMLQLGL-TPNAATYNTLLVEICRRDNILEAQEIFDEM- 388
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S R + D +++ Q L+ E+ + ++ +I F ++
Sbjct: 389 -SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ AL + D + C D++TYN L+ L + D F M E G+VPDF ++ T
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ K +D L F M + +KPD +TY LID F + G + + L++DM ++
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P Y ++++ G + A+ + ++M
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
EVV+ ++ +N ++ A K R+ E + ++G D++TYN +++ R G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V + S G+ P ++YN +L L KI + D EM + G+ P+ TY
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L+ R NI E+ +F++M ++ + P + + SLI L + G + A+ F EM S
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ E+V+ +I + K ++KAL +F+ + KPD +TYN ++D
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G + + M ++PD ISY T+LN L L +M E GI+P+L
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+T LI + R+G++ ++ + M I P + Y +LID K ++ A + E
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667
Query: 269 M 269
M
Sbjct: 668 M 668
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 123/270 (45%), Gaps = 11/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETN---DIDLSFQILKDLLV 61
I+ C+ G +S A+++ + + F+ YN L + D D+ F + +
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE--- 495
Query: 62 SSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
R + D YT R + + + L E +V+ + N +I F K+ ++
Sbjct: 496 --RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A ++D + PD I+Y VL+ G + + LN M E G+ P+ ++ NTL
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + + Y +M +GI PD +Y LID + + N+E++ L N+M+++ +
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +I Y +++ GK+ A + +M
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKM 703
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLL 60
N ++ LCK + A L + ++ + +P+ Y ++ + ++D + + + ++
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGM-VPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y F + + +++++ I ++ F S +
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + D + +P+L+T N ++ R G + + M G++PD SYNTL+
Sbjct: 590 EALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K L+ I EM + G++ +++TY +++ F G ++E+ ++ M + I
Sbjct: 650 DGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGIN 709
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI+ + A +EM
Sbjct: 710 PDGATYSSLINGHVSQDNMKEAFRFHDEM 738
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N +L L R G V+ + + G+ + + N ++N L K R+ + + + +M
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G+ D++TY LI+++ R G +EE+ +L N + + P + Y +++ L K+GK D
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 262 AMTIFEEM 269
A + EM
Sbjct: 346 AKDVLIEM 353
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 118/272 (43%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + ++C+ N+ A + + + + LP+ +++ ++ A + + +++
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGV-LPDLVSFSSLIGVLARNGHLYQALMHFREME 424
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + YT F + L +E++ ++ N + K +
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A ++F+ + PD T+ ++ + G ++ LN F +M + PD ++YNTL+
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + + +M I PD ++Y +++ F +G + E+L L + M ++ IR
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ +LI + G + A +M S+
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN 636
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 105/238 (44%), Gaps = 3/238 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK GN+ A+ L +++ N+ P+ YN ++ + ++ + ++ D++
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNL-KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + L +++++ +++ N +I + +S + KA
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ PD +YN ++D + + M++ G+ + I+YN +LN
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
++ R+M E GI PD TY++LI+ N++E+ R ++M Q+ + P
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 82/169 (48%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI N+++ ++ ++ A I+ + + ++ T NI+++ L + + +++
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFL 280
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+ GV D ++YNTL+N + ++ G++P LLTY A++ +
Sbjct: 281 SDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G + + + +M Q + P+ Y +L+ + + + A IF+EM+
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS 389
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 15/278 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC+A V AV +L+ + + P+ + ++ E I + L
Sbjct: 189 NTLMKALCRAHQVRTAVLMLEEMSSSGV-APDETTFTTLMQGFVEEGSIKAA------LR 241
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFA 114
V +R L C ++ + +L L +I++ + I N +
Sbjct: 242 VKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLC 301
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ + AL + D + PD+ TYNIV++ L + G++ + M E G +PD
Sbjct: 302 QNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDIT 361
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++NTL+ L RL+ L R++ G+ PD+ T+ LI++ + G+ + +LRLF +M
Sbjct: 362 TFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM 421
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
K P Y +LIDNL +GK+ A+ + +EM S+
Sbjct: 422 KSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESA 459
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 7/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY CK G V A+ +Q N F P+ YN + + + + +++ ++
Sbjct: 263 NGY----CKLGRVEDALGYIQQ-EIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + ++V+ I N +I A ++E
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLE 377
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + PD+ T+NI+++ L +VG L F MK +G PD ++YNTL+
Sbjct: 378 EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLI 437
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+NL + +L L +EM +G +TY +ID + IEE+ +F+ M Q I
Sbjct: 438 DNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 497
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + +LID L K ++D A + +M S
Sbjct: 498 RNAITFNTLIDGLCKDKRIDDANQLISQMISE 529
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 126/274 (45%), Gaps = 7/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLL----QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N ++ LC+ G+V A++++ Q D ++F YN V+ + ++ + IL
Sbjct: 294 NTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLEEAKGILNQ 350
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + A + + L +V + N +I A K
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ AL +F+ +K C PD +TYN ++D L +G++ L+ M+ AG ++YNT
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K R++ F +M GI + +T+ LID + I+++ +L + M +
Sbjct: 471 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG 530
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++P+ Y S++ + K G + A I + M ++
Sbjct: 531 LQPNNITYNSILTHYCKQGDIKKAADILQTMTAN 564
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 7/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I LC + A+ L + + K + P+ Y N ++ A + D L+ ++ +++
Sbjct: 364 NTLIVALCSGNRLEEALDLARQVTLKGLS-PDVYTFNILINALCKVGDPQLALRLFEEMK 422
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T Y + L ++E+ P S + N II K +IE
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIE 482
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + + IT+N ++D L + R++D + M G+ P+ I+YN++L
Sbjct: 483 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSIL 542
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + + M +G + D++TY LI+ + G + +L+L M+ + +R
Sbjct: 543 THYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMR 602
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
+ Y +I +L + AM +F EM +++ P D
Sbjct: 603 ATPKAYNPVIQSLFRRNNTRDAMNLFREM----TEVGEPPD 639
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + A +L + ++ LP+ +N ++VA N ++ + + + V+ + L
Sbjct: 335 LCKNGQLEEAKGILNQMVERGC-LPDITTFNTLIVALCSGNRLEEALDLARQ--VTLKGL 391
Query: 67 SSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S D YT A D L EE+ + N +I ++ KAL
Sbjct: 392 SPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALD 451
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ ++ C +TYN ++D L + R+ + F M G+ + I++NTL++ L
Sbjct: 452 LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 511
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K +R+D +M G++P+ +TY +++ + + G+I+++ + M +
Sbjct: 512 KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVV 571
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L K G+ +A+ + M
Sbjct: 572 TYGTLINGLCKAGRTQVALKLLRGM 596
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 84/167 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ A ++ Q+ A+L+ + + PD T+ ++ G + L A
Sbjct: 185 VVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKA 244
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G P ++ N L+N K+ R++ L Y ++ +G +PD +TY ++ + G
Sbjct: 245 RMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNG 304
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +L++ + M Q+ P ++ Y +++ L K G+++ A I +M
Sbjct: 305 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 39/274 (14%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEE 93
YN +L E + + L + ++ R + D T +A ++ +EE
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEM--GERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 210
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ ++ F + I+ AL + + + C P +T N++++ ++GR
Sbjct: 211 MSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGR 270
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V D L G PD I+YNT +N L + + L M + G PD+ TY
Sbjct: 271 VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNI 330
Query: 214 LIDSFGRTGNIEESLRLFNDMKQ-----------------------------------QQ 238
+++ + G +EE+ + N M + +
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P +Y + LI+ L K+G LA+ +FEEM SS
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSS 424
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 144/330 (43%), Gaps = 70/330 (21%)
Query: 3 NGYIEKLCKA----------------GNVSAAVRLLQSLRDKNIFLPNA--------YNC 38
N I+ LCKA G + AVRLL+ + + P+ Y C
Sbjct: 178 NSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGL-QPDVVTYSLLIDYYC 236
Query: 39 VLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQ 96
+ E +I D +V R + D YT + + + ++Q
Sbjct: 237 KIGRCTEARNI-------FDSMVR-RGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQ 288
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
P V N +I A+AK+ ++KA+ F ++ P+++TY V+DIL + GRV D
Sbjct: 289 DGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVED 348
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNL------RKIRRLDLCLI---------------- 194
++ F+ M G+ PD I++ +L++ L +K+ +L +I
Sbjct: 349 AVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMD 408
Query: 195 -------------YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+F ++ G+KPD+++YT LID + G ++ES++L M +RP
Sbjct: 409 SLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRP 468
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +L++ K G+VD A+ ++ EM S
Sbjct: 469 DNVTYSALLNGYCKNGRVDDALALYREMFS 498
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
FA + + +A + G C P++++YN+V++ L + G V+ F M G
Sbjct: 112 FALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFP 171
Query: 171 PDFISYNTLLNNLRKIRRLDL----------------CLIYFREMGESGIKPDLLTYTAL 214
P+ ++YN++++ L K + +D + ++M G++PD++TY+ L
Sbjct: 172 PNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLL 231
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
ID + + G E+ +F+ M ++ P Y YR+L+ G
Sbjct: 232 IDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKG 274
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I +N I+ + K ++ +A FD I + KPD+++Y I++D G++++ +
Sbjct: 401 IFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGR 460
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ PD ++Y+ LLN K R+D L +REM +KP+ +TY ++ G
Sbjct: 461 MVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + + + I+ I Y ++ L + VD A+ +F+ + S
Sbjct: 521 VVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRS 568
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 121/293 (41%), Gaps = 42/293 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSL--RDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLLV 61
I+ CK G + A + S+ R +N P+AY +L A + +L ++
Sbjct: 232 IDYYCKIGRCTEARNIFDSMVRRGQN---PDAYTYRTLLHGYATKGALVDMHDLLALMIQ 288
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L + RA+ + + + E+ Q +++ +I K+ ++E
Sbjct: 289 DGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVED 348
Query: 122 ALLIFDHIKGLKCKPDLITY-----------------------------------NIVLD 146
A+ F + PD+IT+ N ++D
Sbjct: 349 AVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMD 408
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L + GRV + + F + GV PD +SY L++ ++D + M G++P
Sbjct: 409 SLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRP 468
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
D +TY+AL++ + + G ++++L L+ +M + ++P+ Y ++ L G+V
Sbjct: 469 DNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 93/177 (52%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F ++++ + ++ +I + ++++++ + + + +PD +TY+ +L+
Sbjct: 422 FFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYC 481
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ GRV+D L + M V P+ I+YN +L+ L R+ ++ ++ +SGI+ +
Sbjct: 482 KNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGIN 541
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
TY ++ ++E+LR+F ++ ++ + + + +I L K+G++ A ++F
Sbjct: 542 TYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLF 598
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 79/166 (47%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + ++ + K+ +++ AL ++ + KP+ ITYNI+L L GRV +
Sbjct: 471 VTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMK 530
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ ++G+ +YN +L L + +D L F+ + + ++ T+ +I + G
Sbjct: 531 IVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGR 590
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I ++ LF+ + + P +Y +I + + G ++ + +F M
Sbjct: 591 IGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSM 636
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G V A +LL S + + P YN +L + D + +L ++L
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSFSSRGM-EPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T ++ Y D+ + +E+ + ++ + +I A++ +
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLY 414
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL+ F ++ PD + Y I++D R G ++D L M G D ++YNT L
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFL 474
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K + + F EM E G+ PD T+T LI + + GN++++L LF M + ++
Sbjct: 475 NGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK 534
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +LID K G++ A ++++M
Sbjct: 535 PDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LCK G A +L + + PNA YN +LV ++I + +I ++
Sbjct: 331 NAILYGLCKIGKYDRAKDVLIEMLQLGL-TPNAATYNTLLVEICRRDNILEAQEIFDEM- 388
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S R + D +++ Q L+ E+ + ++ +I F ++
Sbjct: 389 -SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ AL + D + C D++TYN L+ L + D F M E G+VPDF ++ T
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ K +D L F M + +KPD +TY LID F + G + + L++DM ++
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P Y ++++ G + A+ + ++M
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
EVV+ ++ +N ++ A K R+ E + ++G D++TYN +++ R G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V + S G+ P ++YN +L L KI + D EM + G+ P+ TY
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L+ R NI E+ +F++M ++ + P + + SLI L + G + A+ F EM S
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ E+V+ +I + K ++KAL +F+ + KPD +TYN ++D
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G + + M ++PD ISY T+LN L L +M E GI+P+L
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+T LI + R+G++ ++ + M I P + Y +LID K ++ A + E
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667
Query: 269 M 269
M
Sbjct: 668 M 668
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 123/270 (45%), Gaps = 11/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETN---DIDLSFQILKDLLV 61
I+ C+ G +S A+++ + + F+ YN L + D D+ F + +
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE--- 495
Query: 62 SSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
R + D YT R + + + L E +V+ + N +I F K+ ++
Sbjct: 496 --RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A ++D + PD I+Y VL+ G + + LN M E G+ P+ ++ NTL
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + + Y +M +GI PD +Y LID + + N+E++ L N+M+++ +
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +I Y +++ GK+ A + +M
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKM 703
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLL 60
N ++ LCK + A L + ++ + +P+ Y ++ + ++D + + + ++
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGM-VPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y F + + +++++ I ++ F S +
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + D + +P+L+T N ++ R G + + M G++PD SYNTL+
Sbjct: 590 EALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K L+ I EM + G++ +++TY +++ F G ++E+ ++ M + I
Sbjct: 650 DGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGIN 709
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI+ + A +EM
Sbjct: 710 PDGATYSSLINGHVSQDNMKEAFRFHDEM 738
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N +L L R G V+ + + G+ + + N ++N L K R+ + + + +M
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G+ D++TY LI+++ R G +EE+ +L N + + P + Y +++ L K+GK D
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 262 AMTIFEEM 269
A + EM
Sbjct: 346 AKDVLIEM 353
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 118/272 (43%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + ++C+ N+ A + + + + LP+ +++ ++ A + + +++
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGV-LPDLVSFSSLIGVLARNGHLYQALMHFREME 424
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + YT F + L +E++ ++ N + K +
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A ++F+ + PD T+ ++ + G ++ LN F +M + PD ++YNTL+
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + + +M I PD ++Y +++ F +G + E+L L + M ++ IR
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ +LI + G + A +M S+
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN 636
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 105/238 (44%), Gaps = 3/238 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK GN+ A+ L +++ N+ P+ YN ++ + ++ + ++ D++
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNL-KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + L +++++ +++ N +I + +S + KA
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ PD +YN ++D + + M++ G+ + I+YN +LN
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
++ R+M E GI PD TY++LI+ N++E+ R ++M Q+ + P
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 82/169 (48%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI N+++ ++ ++ A I+ + + ++ T NI+++ L + + +++
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFL 280
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+ GV D ++YNTL+N + ++ G++P LLTY A++ +
Sbjct: 281 SDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G + + + +M Q + P+ Y +L+ + + + A IF+EM+
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMS 389
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 15/217 (6%)
Query: 69 DCY--TNFARAFIMTDDCTQLL-------------IFIEEVVQIASPESIIVVNRIIFAF 113
+CY T + ++ D C ++L F EE+++ P S+ N ++ F
Sbjct: 87 ECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRF 146
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K I A +FD I +P +++YN +++ R+G +N+ ++M +GV PD
Sbjct: 147 CKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDV 206
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+Y+ L+N L K ++D F EM G+ P+ +T+T LID + G ++ ++ ++
Sbjct: 207 YTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQ 266
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
M Q + P + Y +LI L K G ++ A + +EM+
Sbjct: 267 MLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMS 303
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ + CK G++ RL QS+ D K P+ +YN ++ D++ F++ +
Sbjct: 143 MHRFCKEGDI----RLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMH 198
Query: 61 VSSRTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
S + D YT + M DD +L F E +V+ P + +I
Sbjct: 199 ASG--VQPDVYTYSVLINGLCKESKM-DDANEL--FEEMLVKGLVPNGVTFTT-LIDGHC 252
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ +++ A+ ++ + PDLITYN ++ L + G +N + M G+ PD I
Sbjct: 253 KNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKI 312
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 313 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREM 372
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 373 LSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A +F+ +KGL P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANELFEEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLAMEVYKQMLS 269
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
++PD I+YNTL+ L K L+ EM G+KPD +TYT LID + G+++
Sbjct: 270 QSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDT 329
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M Q+ IR Y +LI L + G+ A + EM S
Sbjct: 330 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLS 374
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/138 (18%), Positives = 66/138 (47%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E F + +L +L K++ +L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWA 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G ++ + M++S
Sbjct: 183 RLGDLNEGFKLKSAMHAS 200
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 96/176 (54%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ ++ ++ + +++ ++ +I +A +FD + CKPD +YNI++ + R
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+++ F M G+ PD ++YNTL++ L ++ RL F+ M +G PDL TY+
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+D F + G + ++ RLF M+ ++P I +Y LID + K G + A +F E+
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSEL 506
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 137/285 (48%), Gaps = 12/285 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLS-----FQILK 57
N I+ LC A LL + NI +PN + ++ A + +S F+ +
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNI-MPNIFTFNVLVDAICKEGKVSEAQGVFKTMT 332
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ V ++ Y++ + + + + + ++ N +I + K++
Sbjct: 333 EMGVEPDVVT---YSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAK 389
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+I++A +F+ + PD + YN ++ L ++GR+ + + F +M G +PD +Y+
Sbjct: 390 RIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYS 449
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL+ K L FR M + +KPD+ Y LID+ + GN++++ +LF+++ Q
Sbjct: 450 MLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQ 509
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+ P++ +Y ++I+NL K G +D A+ F M D P +F
Sbjct: 510 GLLPNVQIYTTIINNLCKEGLLDEALEAFRNME---GDGCPPDEF 551
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ I ++ +I F+ ++++ A +F + L +PD +T+N +++ L +VG+ +
Sbjct: 127 SPD-IYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAV 185
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F + +G P +Y T++N L KI F++M E+G +P+++TY LIDS
Sbjct: 186 EFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSL 245
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + E+L +F+ MK ++I P I+ Y SLI L + A + EM S
Sbjct: 246 CKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
DC+++ R + +++++ + N +I K + +A+ FD
Sbjct: 138 DCFSHLQRVDLA-------FSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDD 190
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ C+P + TY +++ L ++G F M+EAG P+ ++YN L+++L K +
Sbjct: 191 FEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKL 250
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ L F M I PD+ TY +LI +E+ L N+M I P+I+ +
Sbjct: 251 VNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNV 310
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+D + K GKV A +F+ M
Sbjct: 311 LVDAICKEGKVSEAQGVFKTM 331
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+DL+F + ++ + + Q + F ++ ++
Sbjct: 146 VDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTT 205
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K + A +F ++ C+P+++TYNI++D L + VN+ L+ F+ MK
Sbjct: 206 IINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKR 265
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD +YN+L+ L RR EM I P++ T+ L+D+ + G + E+
Sbjct: 266 ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQ 325
Query: 229 RLFNDMKQQQIRPSIYVYRSLI 250
+F M + + P + Y SL+
Sbjct: 326 GVFKTMTEMGVEPDVVTYSSLM 347
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 21/278 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G +AA L + + + PN YN ++ + + ++ + I + +
Sbjct: 207 INGLCKIGETTAAAGLFKKMEEAGC-QPNVVTYNILIDSLCKDKLVNEALDIFS--YMKA 263
Query: 64 RTLSSDCYT---------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
+ +S D +T NF R + + LL E+ + +I N ++ A
Sbjct: 264 KRISPDIFTYNSLIQGLCNFRR----WKEASALL---NEMTSLNIMPNIFTFNVLVDAIC 316
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K ++ +A +F + + +PD++TY+ ++ + + F +M G PD
Sbjct: 317 KEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAF 376
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYN L+ K +R+D F EM G+ PD + Y LI + G + E+ LF +M
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P ++ Y L+D K G + A +F M S+
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQST 474
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT + T +++ + +++ N +I + K + + +AL IF ++K
Sbjct: 203 YTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMK 262
Query: 131 GLKCKPDLITYNIVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ PD+ TYN ++ L R + +LNE S+ ++P+ ++N L++ + K
Sbjct: 263 AKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN---IMPNIFTFNVLVDAICKEG 319
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
++ F+ M E G++PD++TY++L+ + I E+ +LF+ M + +P + Y
Sbjct: 320 KVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYN 379
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
LI K ++D A +F EM
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEM 401
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA-SMKEAGVVPDFIS 175
R I+ AL F+H+ + P +I + +L + ++G+ + + M+ AG+ PD +
Sbjct: 73 RNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYT 132
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ L++ ++R+DL F +M + G++PD +T+ LI+ + G +++ F+D +
Sbjct: 133 LSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFE 192
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+P++Y Y ++I+ L K+G+ A +F++M +
Sbjct: 193 ASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEA 229
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F K + KA +F ++ KPD+ YNI++D + + G + D F+ + G++P
Sbjct: 454 GFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLP 513
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ Y T++NNL K LD L FR M G PD +Y +I F + + + +L
Sbjct: 514 NVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLI 573
Query: 232 NDMK 235
+M+
Sbjct: 574 GEMR 577
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 121/272 (44%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G VS A + +++ + + P+ Y+ ++ + +I + ++ ++
Sbjct: 309 NVLVDAICKEGKVSEAQGVFKTMTEMGV-EPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367
Query: 61 VSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ Y + + D+ QL F E + Q +P+++ N +I +
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQL--FNEMIHQGLTPDNV-NYNTLIHGLCQLG 424
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A +F ++ PDL TY+++LD + G + F M+ + PD YN
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYN 484
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ + K L F E+ G+ P++ YT +I++ + G ++E+L F +M+
Sbjct: 485 ILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGD 544
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y +I + A + EM
Sbjct: 545 GCPPDEFSYNVIIRGFLQYKDESRAAQLIGEM 576
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 21/275 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNI-----FLPNAYNCVLVASAETNDIDLSFQILKDLL 60
++ L +AG++S + ++ KN+ F Y+ V+ A ++ + ++ + +
Sbjct: 225 VDGLSRAGDISKVEAVYDEMKRKNVAGDVYF----YSAVINAYCRGGNVRRASEVFDECV 280
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y F + + ++ + IV N +I + + +E
Sbjct: 281 GHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVE 340
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL I ++ + + D+ TYN + L RV R+ D M E GV P+++SY TL+
Sbjct: 341 KALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLI 400
Query: 181 N------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ ++ + RRL FR+M G +P ++TY +ID + + G+I E+ R +M
Sbjct: 401 SIHAKEGDMVEARRL------FRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEM 454
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ + P IY Y L+ GKVD+A+ +FEEM
Sbjct: 455 EKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEM 489
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CK G + AA LL ++ + + +N ++ ++ + +I ++
Sbjct: 295 INGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEI--KAVMEKM 352
Query: 65 TLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D YT R M D L I E+ V + + +I AK
Sbjct: 353 GIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVA----PNYVSYTTLISIHAKEGD 408
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A +F ++G +P ++TYN+++D + G + + M++ G+VPD +Y
Sbjct: 409 MVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAG 468
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ ++D+ L F EM G KP+++ YTAL+ + G EE+ +L++DM
Sbjct: 469 LVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAG 528
Query: 239 IRPSIYVYRSLIDNLKKMGKVD 260
+ P +Y L+ +L + D
Sbjct: 529 LTPDDTLYSVLVGSLHTDSRKD 550
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 120/271 (44%), Gaps = 3/271 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK+G+V A LL L + L NA YN +L + + D +LK++
Sbjct: 155 VDGFCKSGSVDDAHGLLDELPRHGVGL-NACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT D +++ +E+ + + + +I A+ + + +A
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD G +P+ TY +++ ++G++ A M+ GV + I +NT+++
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ ++ L M + GI+ D+ TY L R +E++ +L + M ++ + P+
Sbjct: 334 CRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNY 393
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
Y +LI K G + A +F +M S
Sbjct: 394 VSYTTLISIHAKEGDMVEARRLFRDMEGKGS 424
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 69/130 (53%)
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
++ ++V+D + G V+D + GV + YN+LL++ + R D +E
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M G++P + TYT L+D R G+I + ++++MK++ + +Y Y ++I+ + G
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268
Query: 259 VDLAMTIFEE 268
V A +F+E
Sbjct: 269 VRRASEVFDE 278
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 7/278 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQS-LRDKNIFLPNA--YNCVLVASAETNDIDLSFQILK 57
M N ++ LCK G + AV+ ++ +R + PN YNC+ A ++ ++ +++
Sbjct: 211 MLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVA 270
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES---IIVVNRIIFAFA 114
+ T ++ L F E + PE+ + + ++ AF
Sbjct: 271 KMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREK-RTVWPEARGNAVTYSTLVGAFL 329
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ + A+ +F + PD I Y ++ L + GR++D + SMK+AG D
Sbjct: 330 HTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAK 389
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN L+ + +RL+ EM E+G++PD+ TY L+ + G+ L M
Sbjct: 390 AYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKM 449
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
RPS+ + +LI K+G++D A+ IF M+ S
Sbjct: 450 IDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDES 487
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 129/265 (48%), Gaps = 23/265 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA------YNCVLVASAETNDIDLSFQIL 56
N + LC G V AA L+ R+K P A Y+ ++ A TN++ ++ ++
Sbjct: 285 NTIVGGLCWVGRVGAA---LEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELF 341
Query: 57 KDLLVSSRTLSSDCY----TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
+++ + + Y + +A + D + + Q+ + N +I
Sbjct: 342 HEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAK----AYNILIGG 397
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGV 169
F + +++ +A + +K +PD+ TYN +L L + G V+++L + M + G
Sbjct: 398 FCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGK---MIDGGC 454
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P +++ TL++ K+ ++D L FR M ESGI+P+ + Y LID ++ + ++
Sbjct: 455 RPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIE 514
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLK 254
LF++M+++ + ++ + +L+ L+
Sbjct: 515 LFDEMREKHVPANVTTFNALLKGLR 539
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 6/221 (2%)
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S R LS+ Y +R+ + D + L + + A P N ++ A A++ +
Sbjct: 98 SPRILSALLYKILSRSPSSSADAARFLR--DSLAAGAPPPDTSAFNTLLDALAQAGDLPG 155
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM--KEAGVVPDFISYNTL 179
+F ++ +P+++TY I++ L + GRV D L+ M E+ V PD + N +
Sbjct: 156 MTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNI 215
Query: 180 LNNLRKIRRLDLCLIYFREMGES--GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++ L K RL + + E S G P+ +TY L +F R GN+ + L M+++
Sbjct: 216 VDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKE 275
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
++ P+ +++ L +G+V A+ F E + + G
Sbjct: 276 RVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARG 316
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 52/282 (18%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQIL-KDLLV 61
N ++ L +AG++ +L S+RD ++ PN +++ IL K L
Sbjct: 141 NTLLDALAQAGDLPGMTQLFASMRDASV-RPNV---------------VTYGILVKGLCK 184
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES-----IIVVNRIIFAFAKS 116
+ R A + D ++ PES ++++N I+ K+
Sbjct: 185 AGRV---------GDALSVLDG-------------MSGPESDVCPDVVMLNNIVDGLCKT 222
Query: 117 RQIEKAL-LIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++++A+ + + ++ + C P+ +TYN + R G V A M++ V P+ +
Sbjct: 223 GRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAV 282
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD----LLTYTALIDSFGRTGNIEESLRL 230
+ NT++ L + R+ L +FRE + + P+ +TY+ L+ +F T N+ ++ L
Sbjct: 283 TLNTIVGGLCWVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMEL 340
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F++M + P +Y ++I L + G++D A ++ M +
Sbjct: 341 FHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKA 382
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 131/272 (48%), Gaps = 20/272 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCK G A+ LL + I YN ++ + +D +F + + ++
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM--ETK 279
Query: 65 TLSSD---------CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+ D C N+ R D ++LL ++++ ++ N +I AF K
Sbjct: 280 GIKPDVFTYNPLISCLCNYGR----WSDASRLL---SDMLEKNINPDLVFFNALIDAFVK 332
Query: 116 SRQIEKALLIFDH-IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ +A ++D +K C PD++ YN ++ + RV + + F M + G+V + +
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ + R D + F++M G+ PD++TY L+D GN+E +L +F M
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+++ ++ I Y ++I+ L K GKV+ +F
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 99/196 (50%)
Query: 77 AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP 136
F + ++ + ++++V++ + ++ + + +A+ + + + C+P
Sbjct: 154 GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP 213
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
DL+TY V++ L + G + LN M++ + D + YNT+++ L K + +D F
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
+M GIKPD+ TY LI G ++ RL +DM ++ I P + + +LID K
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 257 GKVDLAMTIFEEMNSS 272
GK+ A +++EM S
Sbjct: 334 GKLVEAEKLYDEMVKS 349
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 6/273 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC G S A RLL + +KNI P+ +N ++ A + + + + L D +
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNIN-PDLVFFNALIDAFVKEGKL-VEAEKLYDEM 346
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
V S+ D Y + F + + E+ Q + + +I F ++R
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A ++F + PD++TYNI+LD L G V L F M++ + D ++Y T
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L K +++ F + G+KP+++TYT ++ F R G EE+ LF +MK+
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y +LI + G + + +EM S
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 113/234 (48%), Gaps = 6/234 (2%)
Query: 39 VLVASAETNDIDLSFQI---LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
+L A A+ N DL + +++L +S + Y+ F F + L + +++
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYT---YSIFINYFCRRSQLSLALAILGKMM 137
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
++ SI+ +N ++ F +I +A+ + D + + +PD +T+ ++ L + + +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ + M G PD ++Y ++N L K DL L +M + I+ D++ Y +I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D + +++++ LFN M+ + I+P ++ Y LI L G+ A + +M
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ + ++ + I F + Q+ AL I + L P ++T N +L+
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R+++ + M E G PD +++ TL++ L + + + M G +PDL+TY
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
A+I+ + G + +L L N M++ +I + +Y ++ID L K +D A +F +M +
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%)
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S DC N +R + + ++V+ SI+ ++++ A AK + + + +
Sbjct: 39 SDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLG 98
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ ++ L +L TY+I ++ R +++ L M + G P ++ N+LLN
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+ + +M E G +PD +T+T L+ + E++ L M + +P + Y
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
++I+ L K G+ DLA+ + +M
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKM 241
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 5/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLV 61
N I LCK V AV + L K + C LV + + ++ ++ +++
Sbjct: 265 NVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIE 324
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ ++ + V ++ + S+ V N +I + K + ++
Sbjct: 325 LGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDE 384
Query: 122 ALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A L+F + KGL C D +TY+I++D R G+++ ++ M AG+ YN+L
Sbjct: 385 AELLFKEMGEKGL-CAND-VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N K+ L + +F EM + G+KP +++YT+LI + G + E+ RL+++M + I
Sbjct: 443 INGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGI 502
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y + +LI L + ++ A +F+EM
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEM 532
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 4/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N IE CK GN A LL + K + +P+ Y + S+ T + + + + DL
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGL-VPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L+ CY+ + L E+V+ ++ +I K +
Sbjct: 604 REHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTS 663
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ ++ + +PD + Y ++D + G V + M + G P+ ++Y TL+
Sbjct: 664 AVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K +D + ++EM S P+ +TY +D R G++E++++L NDM + +
Sbjct: 724 NELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLA 783
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y L+ K+G+V+ A + +EM
Sbjct: 784 NTV-SYNILVRGFCKLGRVEEATKLLDEM 811
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 125/271 (46%), Gaps = 11/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD----KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
+E L + G V A L+ ++ ++F+ NA L + ++ +L F+ + + +
Sbjct: 338 VEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGL 397
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ ++ Y+ +F + F+ +++ ++ N +I K +
Sbjct: 398 CANDVT---YSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSA 454
Query: 122 ALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A+ FD + KGLK P +++Y ++ G++++ + M G+ P+ ++ TL
Sbjct: 455 AVSFFDEMIDKGLK--PTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTL 512
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L + R+ F EM E + P+ +TY +I+ + GN ++ L N M Q+ +
Sbjct: 513 ISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGL 572
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P Y YR LI +L G+V A ++++
Sbjct: 573 VPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
I C G + A RL + K I PN Y + SA N + +F++ ++L +
Sbjct: 478 ISGYCNKGKLHEAFRLYHEMTGKGI-APNTYTFTTLISALFRANRMTDAFRLFDEMLEQN 536
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + + ++VQ +I + + ++ +A
Sbjct: 537 MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAK 596
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
D + K + + Y+ +L + GR+ D L M + GV D + Y L++
Sbjct: 597 KFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGT 656
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + M + ++PD + YT++ID + + G+++++ +++ M + P+I
Sbjct: 657 IKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNI 716
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L K G +D A +++EM
Sbjct: 717 VTYTTLINELCKAGLMDKAELLWKEM 742
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 129/300 (43%), Gaps = 37/300 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC G V A + + L ++ L Y+ +L + + + + ++++
Sbjct: 583 ISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVV-QIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ CY I D + + ++ + Q P+ +I + +I ++K+ ++KA
Sbjct: 643 DMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTS-MIDGYSKAGSVKKAF 701
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVN-------------------------DML 158
I+D + C P+++TY +++ L + G ++ D L
Sbjct: 702 GIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHL 761
Query: 159 NEFASMKEA---------GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
SM++A G++ + +SYN L+ K+ R++ EM ++ I PD +
Sbjct: 762 AREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCI 821
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ +I R GN++ ++ ++ M + ++P Y LI G++ A + ++M
Sbjct: 822 TYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDM 881
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
+L+ E++ + I + +I +F + + KA + ++ +++ YN+++
Sbjct: 212 VLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRME--SSDLNVVVYNVLIH 269
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L + RV + + + + G+ ++Y TL+ L K++ ++ EM E G P
Sbjct: 270 GLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVP 329
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
++L++ R G + ++ L N +K+ PS++VY +LI++L K GK D A +F
Sbjct: 330 TEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLF 389
Query: 267 EEMN 270
+EM
Sbjct: 390 KEMG 393
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 108/302 (35%), Gaps = 69/302 (22%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I CK GN+SAAV + DK LK +VS
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKG--------------------------LKPTVVS 473
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YT+ + + E+ + +I A ++ ++ A
Sbjct: 474 --------YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDA 525
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+FD + P+ +TYN++++ + G M + G+VPD +Y L+++
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585
Query: 183 LRKIRRL--------DLCLIYF---------------------------REMGESGIKPD 207
L R+ DL +F REM + G+ D
Sbjct: 586 LCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
L+ Y LID + + L +M Q++RP +Y S+ID K G V A I++
Sbjct: 646 LVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWD 705
Query: 268 EM 269
M
Sbjct: 706 IM 707
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K + SA LL+++ D+ + P+ Y ++ ++ + +F I ++
Sbjct: 653 IDGTIKEQDTSAVFGLLKNMHDQRL-RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG 711
Query: 64 RTLSSDCYTNF----ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
T + YT +A +M D +LL + E +V ++P + + A+ +
Sbjct: 712 CTPNIVTYTTLINELCKAGLM--DKAELL-WKEMLVSNSTPNHVTYCC-FLDHLAREGSM 767
Query: 120 EKALLIF-DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
EKA+ + D +KGL + ++YNI++ ++GRV + M + + PD I+Y+T
Sbjct: 768 EKAVQLHNDMLKGLL--ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYST 825
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ + LD + ++ M G+KPD L Y LI G + ++ L +DM ++
Sbjct: 826 IIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG 885
Query: 239 IRPSIYVYRSL 249
++P+ ++SL
Sbjct: 886 VKPNQATHKSL 896
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ D + F M++ ++P + +LN L KIRR+D+ L+ F E+ GI+PD+ Y
Sbjct: 173 RMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYV 232
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
A+I SF N ++ + M+ + ++ VY LI L K +V A+ I
Sbjct: 233 AVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEI 283
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 172 DFIS---YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
DFIS ++ L+ + + +R+ ++ FR M + + P + T +++ + ++ L
Sbjct: 154 DFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVL 213
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF ++ IRP IY+Y ++I + ++ A + + M SS
Sbjct: 214 VLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESS 257
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 99/184 (53%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
++ + E+VQ +++ I+ AF K+R++ A I + + C P+++T+ ++
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
G+V+D L+ + M + G P ISYN L+ L I L L +F M + +
Sbjct: 247 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 306
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+ TY+ L+D F G+++ ++ ++N+MK +P++ VY ++ID L K D A ++
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 366
Query: 266 FEEM 269
++M
Sbjct: 367 IDKM 370
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 4/264 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+ +CK G V A L + + + +YN V+ A + F ++ +++
Sbjct: 146 VSGMCKLGRVEEARGFLA----ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQ 201
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ YT AF + + +V + +++ ++ F + ++ AL +
Sbjct: 202 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 261
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + P I+YN+++ L +G + L+ F SMK ++P+ +Y+TL++
Sbjct: 262 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSN 321
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
LD ++ + EM SG KP+++ YT +ID + +++ L + M P+
Sbjct: 322 AGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVT 381
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI L G+V A+ +F M
Sbjct: 382 FNTLIGRLCDCGRVGRALNVFHGM 405
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 15/275 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC G++ A+ S++ +N LPNA Y+ ++ + D+D + +L
Sbjct: 278 NVLIRGLCCIGDLKGALDFFNSMK-RNALLPNATTYSTLVDGFSNAGDLDGA------ML 330
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIF------IEEVVQIASPESIIVVNRIIFAFA 114
+ + SS C N M D + ++F I++++ P + + N +I
Sbjct: 331 IWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLC 390
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ +AL +F ++ C P+ TYN +L L R G D M G +
Sbjct: 391 DCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLV 450
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YNT++N L ++ ++ M GI+PD T+ A+I ++ + G + + L M
Sbjct: 451 TYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 510
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y LI L GK+ AM +M
Sbjct: 511 NAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKM 545
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK-PDLITYNIVLDILGRVGRVN 155
+A E +V I AFA++ ++AL F L C+ P + YN +LD L R V
Sbjct: 29 VACTEDALVA--AIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVG 86
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ + +M++AGV P+ +YN L+ L + R+D EM G PD +++ ++
Sbjct: 87 AVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIV 146
Query: 216 DSFGRTGNIEES------------------------LRLF------NDMKQQQIRPSIYV 245
+ G +EE+ R++ N+M Q+ ++P++
Sbjct: 147 SGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVT 206
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +++D K ++ +A I M S
Sbjct: 207 YTTIVDAFCKARELRMACAILARMVS 232
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV-PDFISYNTLLNNLRKIR 187
++G+ C D + I R G + L F + G P YN LL+ L +
Sbjct: 26 LRGVACTEDALVAAI--GAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLREN 83
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+ + + M ++G+ P++ TY LI + + ++ + ++ ++M ++ P +
Sbjct: 84 MVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHG 143
Query: 248 SLIDNLKKMGKVDLAMTIFEE 268
+++ + K+G+V+ A E
Sbjct: 144 TIVSGMCKLGRVEEARGFLAE 164
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S++ N +I + + A+L+ + +PD T+N ++ + G+V+
Sbjct: 448 SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 507
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS-FGR 220
M + ++Y L++ L +L ++Y +M GI P+ T+ L+ + F
Sbjct: 508 GQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567
Query: 221 TGNI 224
G I
Sbjct: 568 IGTI 571
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 1/270 (0%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+CN ++ L KA + A +L S++ + +L+ S D +L D +
Sbjct: 86 LCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEM 145
Query: 61 VSSR-TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
T S+ YTN + ++ +++++ +N +I A +++ +
Sbjct: 146 EERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRT 205
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E A IF+ +K + +++N +LD G+ G+V M+ G+ P+ I++NTL
Sbjct: 206 ELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTL 265
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L + + +EM +G+ PD+ TYT +I++F + GN+ ++ +F DM++
Sbjct: 266 INCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGC 325
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y LID L K G+ A I+ +M
Sbjct: 326 SANVVTYNLLIDALVKAGRYQDARDIYFDM 355
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVSS 63
I+ L KAGNV A+ LL + K P+ C VL + N +D + ++ + S
Sbjct: 56 IQSLVKAGNVVLAMELLDKMI-KTGLEPDTLLCNVVLDGLGKANMMDEACKLFASM--KS 112
Query: 64 RTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+D YT R+ + + +E+ + S +I + K+ +IE
Sbjct: 113 MGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIES 172
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+++ + PD T N ++ + R GR F MK++GV + +S+N +L+
Sbjct: 173 AMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLD 232
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K ++ L + EM GIKP+ +T+ LI+ GR E+ ++ +M+ + P
Sbjct: 233 CCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTP 292
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ Y +I+ K G + A +F +M +
Sbjct: 293 DVFTYTCMIEAFAKAGNMGKAFEMFGDMEKA 323
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+ + S + +I + K+ + A+ + D + +PD + N+VLD LG+
Sbjct: 38 QELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKA 97
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
+++ FASMK G D +Y L+ +L + +R + + F EM E G P Y
Sbjct: 98 NMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAY 157
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
T +ID + + G IE ++ + M + + P Y SLI + + G+ +LA IFE M
Sbjct: 158 TNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKK 217
Query: 272 S 272
S
Sbjct: 218 S 218
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V N +I A+ +S +I K + F + KP+ TY V+ L + G V +
Sbjct: 14 VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLD 73
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + G+ PD + N +L+ L K +D F M G D TY LI S GR
Sbjct: 74 KMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE+ LF++M+++ PS Y ++ID K G+++ AM + ++M
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKM 180
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CKAG + +A+ +L+ + DKN+ P+ Y N ++ A + T +L+ +I + + S
Sbjct: 161 IDIYCKAGRIESAMVVLKKMLDKNL-APDDYTLNSLITAVSRTGRTELACEIFERMKKSG 219
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+++ + N ++ K+ ++ A
Sbjct: 220 VAVNT-----------------------------------VSFNAMLDCCGKAGKVGLAY 244
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
D ++ KP+ IT+N +++ LGR ++ M+ AG+ PD +Y ++
Sbjct: 245 QFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAF 304
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K + F +M ++G +++TY LID+ + G +++ ++ DMK++ I P
Sbjct: 305 AKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILP 362
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 75/151 (49%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
I+ C+ ++ N V+ GR R++ +++EF + + G P+ +Y ++ +L K
Sbjct: 5 IQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGN 64
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ L + +M ++G++PD L ++D G+ ++E+ +LF MK Y Y
Sbjct: 65 VVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAI 124
Query: 249 LIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
LI +L + + + A +F+EM + P
Sbjct: 125 LIRSLGRCKRDEEATLLFDEMEERGCTPSAP 155
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 42/278 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CK G+ AA++ L+ + D + P+ YN ++ A + + ++ + ++ V
Sbjct: 171 INGVCKIGDTRAAIKFLRKI-DGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAV-- 227
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ +S+D ++ N +I+ F ++++A+
Sbjct: 228 KGISAD---------------------------------VVTYNTLIYGFCIVGKLKEAI 254
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + P++ TYNI++D L + G+V + + A M +A V PD I+Y+TL++
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ + F M G+ PD+ TYT LI+ F + ++E+L LF +M Q+ + P I
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
Y SLID L K G++ + +EM D P D
Sbjct: 375 VTYSSLIDGLCKSGRISYVWDLIDEMR----DRGQPAD 408
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G + A+ LL + K I PN YN ++ A + + + +L +L
Sbjct: 238 NTLIYGFCIVGKLKEAIGLLNEMVLKTIN-PNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y+ + + + + + + + +I F K++ ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL +F + P ++TY+ ++D L + GR++ + + M++ G D I+Y++L+
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K LD + F +M + I+P++ T+T L+D + G ++++ +F D+ +
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y +I+ K G ++ A+T+ +M
Sbjct: 477 LNVYTYNVMINGHCKQGLLEEALTMLSKM 505
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ ++++ P + +N +I Q++KAL D + + + ++Y +++ + +
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G + + PD + YNT+++ + K + + F EM GI D++T
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI F G ++E++ L N+M + I P++Y Y L+D L K GKV A ++ M
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%)
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
LL L+ Y D + F+ ++ + +++ N II A K +
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQL 214
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A +F + D++TYN ++ VG++ + + M + P+ +YN
Sbjct: 215 VSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNI 274
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ L K ++ M ++ +KPD++TY+ L+D + ++++ +FN M
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ P ++ Y LI+ K VD A+ +F+EM+
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 85/167 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
II N+I+ +FAK + A+ + ++ +PDLIT NI+++ +G++ + A
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ + G PD ++ NTL+ L ++ L + ++ G + + ++Y LI+ + G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++ + + +P + +Y ++ID + K V A +F EM
Sbjct: 179 DTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEM 225
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V A +L + K P+ Y+ ++ ++ + + + +
Sbjct: 276 VDALCKEGKVKEAKSVLAVML-KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T YT F + L +E+ Q I+ + +I KS +I
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D ++ D+ITY+ ++D L + G ++ + F MK+ + P+ ++ LL+ L
Sbjct: 395 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL F+++ G ++ TY +I+ + G +EE+L + + M+ P+
Sbjct: 455 CKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNA 514
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + ++I L K + D A + +M
Sbjct: 515 FTFETIIIALFKKDENDKAEKLLRQM 540
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 75/158 (47%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ ++ A+ F+ + ++ P +I +N +LD ++ + ++ ++ G+ PD I+
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L+N + ++ ++ + G PD +T LI G ++++L + +
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
Q + + Y +LI+ + K+G A+ +++ L+
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLT 195
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ V+D +++F M P I +N +L++ K++ + + GI+PDL+T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ F G I + + ++ P +LI L G+V A+ +++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 84 CTQL---LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
C++L L + +++++ SI+ ++ F +I++A+ + D I GL +P+++
Sbjct: 121 CSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVI 180
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN ++D L +V+ L+ M++ G+ PD I+YN+L+ L + + +M
Sbjct: 181 YNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMM 240
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
GI PD++T++A+ID FG+ G + E+ + +++M Q+ + P+I Y SLI+ L G +D
Sbjct: 241 RMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLD 300
Query: 261 LAMTIFEEMNS 271
A + M S
Sbjct: 301 EAKKVLNFMVS 311
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 105/205 (51%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + F + + + ++++V + ++++ N II + ++RQ++ AL + +H++
Sbjct: 146 FGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHME 205
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ +PD+ITYN ++ L G+ + M G+ PD I+++ +++ K +L
Sbjct: 206 KMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLL 265
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ EM + + P+++TY +LI+ G ++E+ ++ N M + P+ Y +L+
Sbjct: 266 EAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLV 325
Query: 251 DNLKKMGKVDLAMTIFEEMNSSLSD 275
+ K +VD AM I M+ D
Sbjct: 326 NGYCKSKRVDDAMKILCVMSHDGVD 350
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 87/168 (51%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ +R++ A AK ++ E + +F HI+ L DL +++ ++D R R++ L+
Sbjct: 72 SIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCL 131
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P +++ +L+N + R+ + ++ G +P+++ Y +IDS
Sbjct: 132 GKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEN 191
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +L + N M++ IRP + Y SLI L GK ++ I +M
Sbjct: 192 RQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDM 239
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 113/269 (42%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ C + A+ L+ + + PN YN ++ + E +D + +L +
Sbjct: 150 VNGFCHVNRIQEAMSLVDQIVGLG-YEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMG 208
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + + +++++ +I + +I F K Q+ +A
Sbjct: 209 IRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAK 268
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+D + P+++TYN +++ L G +++ M G P+ ++YNTL+N
Sbjct: 269 KQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGY 328
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +R+D + M G+ D TY L + + G + ++ M + P I
Sbjct: 329 CKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDI 388
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y + L+D L + GK++ A+ E++ S
Sbjct: 389 YTFNMLLDGLCEHGKIEKALVKLEDLQKS 417
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 112/266 (42%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC+ V A+ +L + I P+ YN ++ + +S +IL D++
Sbjct: 182 NTIIDSLCENRQVDTALDVLNHMEKMGI-RPDVITYNSLITRLFHSGKWGVSARILSDMM 240
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ F + +E++Q + +I+ N +I ++
Sbjct: 241 RMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLD 300
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + + + P+ +TYN +++ + RV+D + M GV D +YNTL
Sbjct: 301 EAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLY 360
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + M G+ PD+ T+ L+D G IE++L D+++ +
Sbjct: 361 QGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETV 420
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
I Y +I + K KV+ A +F
Sbjct: 421 VGIITYNIIIKGMCKANKVEDAWYLF 446
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 82/155 (52%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
S + AL +F + + P ++ ++ +L + ++ + +++ F ++ G+ D
Sbjct: 50 HSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLY 109
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S++TL++ + RL L L +M + G +P ++T+ +L++ F I+E++ L + +
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ +Y ++ID+L + +VD A+ + M
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHM 204
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 8/209 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC G + A ++L + K F PNA YN ++ ++ +D + +IL +
Sbjct: 287 NSLINGLCIHGLLDEAKKVLNFMVSKG-FFPNAVTYNTLVNGYCKSKRVDDAMKIL--CV 343
Query: 61 VSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+S + D +T + + + +V I N ++ + +
Sbjct: 344 MSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGK 403
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
IEKAL+ + ++ + +ITYNI++ + + +V D F S+ GV PD I+Y T
Sbjct: 404 IEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTT 463
Query: 179 LLNNLRKIR-RLDLCLIYFREMGESGIKP 206
++ LR+ R L+ +Y + + G+ P
Sbjct: 464 MMIGLRRKRLWLEAHELYRKMKKDDGLMP 492
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 73/152 (48%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N ++ + KS++++ A+ I + D TYN + + G+ N A
Sbjct: 319 VTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLAR 378
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M GV+PD ++N LL+ L + +++ L+ ++ +S ++TY +I +
Sbjct: 379 MVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANK 438
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+E++ LF + + + P + Y +++ L++
Sbjct: 439 VEDAWYLFCSLALKGVSPDVITYTTMMIGLRR 470
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 18/267 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ CK+GN+ A ++ +R A+ D+D+ F+I ++
Sbjct: 601 IDGYCKSGNIEKACQIYARMR---------------GDADIPDVDMYFKIKNNVAEKPNV 645
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
++ Y +E + + IV + +I F K+ ++++A +
Sbjct: 646 VT---YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F + P++ TY+ ++D L + R++ +L + M E P+ + Y +++ L K
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ + D M E G KP+++TYTA+ID FG+ G +++ L LF +M + P+
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y LI++ G +D A + EEM +
Sbjct: 823 YTVLINHCCATGHLDEAYALLEEMKQT 849
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 25/291 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDI------DLSFQ 54
N + CK+ + S A +LL+ + +K P YN ++ + ++ +L+ +
Sbjct: 382 NSLVHAYCKSDDFSYAYKLLKKM-EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEK 440
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
++L + L+ +FAR + I E++ + +I
Sbjct: 441 AYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLC 500
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ ++E A +F +KG PD+ TY I++D + G + N M G P +
Sbjct: 501 NASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVV 560
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K +++ + F M G P+++TYTALID + ++GNIE++ +++ M
Sbjct: 561 TYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Query: 235 KQQ----------------QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +P++ Y +L+D L K KV A + E M
Sbjct: 621 RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETM 671
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 59/314 (18%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVS 62
+ + LCK G A+ L++ K F+PN YN ++ E + + + L
Sbjct: 282 FAQALCKVGKWREALSLIE----KEDFVPNTILYNKMISGLCEASFFEEAMDFL------ 331
Query: 63 SRTLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPE----SIIVVNRIIFAFAKS 116
+R S+ C N I+ C + L + ++ + E S + N ++ A+ KS
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV-------------NDMLNE--- 160
A + ++ +CKP + YNI++ + G + N+ML+
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTV 451
Query: 161 ---------------FASMKEA----------GVVPDFISYNTLLNNLRKIRRLDLCLIY 195
F ++A G VPD +Y+ ++ L R++
Sbjct: 452 LNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F+EM +G+ PD+ TYT LID F + G I+++ ++M + P++ Y +LI K
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571
Query: 256 MGKVDLAMTIFEEM 269
KV +A +FE M
Sbjct: 572 AKKVSVANELFELM 585
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+++ R G N L E +K+ G P ++YN L+ + +LD + REM E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G+ D T + + G E+L L ++++ P+ +Y +I L + +
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEE 326
Query: 262 AMTIFEEMNSS 272
AM M S+
Sbjct: 327 AMDFLNRMRST 337
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 111/309 (35%), Gaps = 79/309 (25%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I+ CKA + A + + + + PN Y + D +DL ++L +L +S
Sbjct: 687 IDGFCKAAKLDEAQEVFHKMVEHG-YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745
Query: 64 RTLSSDCYTNFARAF---IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT TD+ +L++ +EE +++ +I F K+ +++
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEK---GCKPNVVTYTAMIDGFGKAGKVD 802
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA------------- 167
K L +F + C P+ +TY ++++ G +++ MK+
Sbjct: 803 KCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVI 862
Query: 168 --------------------GVVPDFISYNTLLNNLRKIRRLDLCL-------------- 193
G P + Y L++N K RL++ L
Sbjct: 863 EGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMA 922
Query: 194 ---------IY--------------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
IY F +M G+ PDL T+ L+ R EE+L+L
Sbjct: 923 AKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982
Query: 231 FNDMKQQQI 239
+ + Q I
Sbjct: 983 SDSLCQMDI 991
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 6/143 (4%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ I YN ++ L + ++ M+ +P+ +Y LL ++L C
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
M G P + +L+ ++ ++ + + +L M++ + +P VY LI ++
Sbjct: 366 LSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICS 425
Query: 256 MGKV------DLAMTIFEEMNSS 272
G++ +LA + EM S+
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSA 448
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+V+ + + NR+I ++ ++ + +A+ +F+ ++ CKPD +TY ++DI
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+ G+ PD +Y+ ++N L K L F EM + G P+L+
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY ++D + N + +L+L+ DM+ P Y +++ L G ++ A +F EM
Sbjct: 506 TYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 78/139 (56%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+P+ +TYN ++ GR +N+ +N F M+EAG PD ++Y TL++ K LD+ +
Sbjct: 395 CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
++ M G+ PD TY+ +I+ G+ G++ + +LF +M Q P++ Y ++D
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K A+ ++ +M ++
Sbjct: 515 AKARNYQSALKLYRDMQNA 533
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + C P+L+TYNI++D+ + L + M+ AG
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAG 534
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM + PD Y L+D +G+ GN+E++
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M + P++ SL+ ++ K+ A + + M
Sbjct: 595 QWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q +P +++ N ++ AK+R + AL ++ ++ +PD +TY+IV+++L
Sbjct: 491 LFCEMVDQGCTP-NLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + F M++ +PD Y L++ K ++ +++ M +G+ P++
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNV 609
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R I E+ L +M +RPS+ Y L+
Sbjct: 610 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 135 KPDLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
K D TY ++ LGR G +N +L+E M G P+ ++YN L+++ + L+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDE---MVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ F +M E+G KPD +TY LID + G ++ ++ ++ M+ + P + Y +I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K G + A +F EM
Sbjct: 478 CLGKAGHLPAAHKLFCEM 495
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ NL + ++ EM G +P+ +TY LI S+GR +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ +FN M++ +P Y +LID K G +D+AM +++ M +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 141/308 (45%), Gaps = 45/308 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I K G+ +A+RL +++ ++ P A Y +L + + ++ + ++K++
Sbjct: 241 ISAFGKLGHYDSAIRLFDEMKENGLY-PTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKG 299
Query: 64 RTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
TL+ YT + + DD + +F++ + P+ ++++N +I K ++E
Sbjct: 300 CTLTVFTYTEWIKGLGKAGRVDDAYR--VFLDMIKDGCKPD-VVLINSLINILGKVGRLE 356
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRV-GRVNDMLNEFASMKEAGVVPDFISYNTL 179
L +F ++ +CKP+++TYN V+ L ++ + F MK G+ P +Y+ L
Sbjct: 357 VTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSIL 416
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS---------------------- 217
++ K R++ L+ EM E G P Y +LI+S
Sbjct: 417 IDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCG 476
Query: 218 -------------FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
FG+ G + E++ LFN+M++ +P +Y Y +L+ + + G +D A +
Sbjct: 477 HSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQS 536
Query: 265 IFEEMNSS 272
+ M+ +
Sbjct: 537 LLRTMDEN 544
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDML 158
S + ++ I+ K++ + KAL +F IKG KCKP TYN ++ +L G + +V+++
Sbjct: 162 SSVYLSEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIY 221
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
NE + + PD ++Y+ L++ K+ D + F EM E+G+ P YT L+ +
Sbjct: 222 NEMCN--DGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIY 279
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +E++L + +MK + +++ Y I L K G+VD A +F +M
Sbjct: 280 FKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDM 330
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 10/274 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA----SAETNDIDLSFQIL 56
N I L K G + ++L + + PN YN V+ A A ++ F+ +
Sbjct: 343 NSLINILGKVGRLEVTLKLFRKMESWQC-KPNVVTYNTVIKALFECKAPASEAASWFEKM 401
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K ++ SS Y+ F T+ + L+ +EE+ + P +I + K
Sbjct: 402 KGCGIAP---SSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKV 458
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ E A +F +K Y +++ G+ GR+++ ++ F M++ G PD +Y
Sbjct: 459 KRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAY 518
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ + + +D R M E+G PDL ++ +++ RTG + ++ +F MK
Sbjct: 519 NALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKS 578
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I+P Y +++ L G + A + EMN
Sbjct: 579 SIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMN 612
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I AF K + A+ +FD +K P Y +L I ++ +V L+
Sbjct: 235 VTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKE 294
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK+ G +Y + L K R+D F +M + G KPD++ +LI+ G+ G
Sbjct: 295 MKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGR 354
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNS 271
+E +L+LF M+ Q +P++ Y ++I L + A + FE+M
Sbjct: 355 LEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKG 403
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K ++ +A+ +F+ ++ L KPD+ YN ++ + R G +++ + +M E G
Sbjct: 486 MIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENG 545
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD S+N +LN L + D + F +M S IKPD ++Y ++ G EE+
Sbjct: 546 CSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAA 605
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+L +M + + Y S+ L+ +GKVD
Sbjct: 606 KLMREMNLKGFEYNNITYTSI---LEAVGKVD 634
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK + A+ LL+ + +K P AY ++ + + + + ++ +L +
Sbjct: 417 IDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCG 476
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S+ Y + F ++ + E+ ++ S + N ++ ++ I++A
Sbjct: 477 HSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQS 536
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + C PDL ++NI+L+ L R G + + FA MK + + PD +SYNT+L L
Sbjct: 537 LLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLS 596
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ REM G + + +TYT+++++ G+
Sbjct: 597 HAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGK 632
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I D ++ C + + ++ +LG+ VN L+ F +K P +YN+++ L+
Sbjct: 150 IQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLK 209
Query: 185 KIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L+ + EM G PD +TY+ALI +FG+ G+ + ++RLF++MK+ + P+
Sbjct: 210 QEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTA 269
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y +L+ K+ KV+ A+ + +EM
Sbjct: 270 KIYTTLLGIYFKLDKVEKALDVIKEM 295
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 15/278 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC+A V AV +L+ + + + P+ + ++ E I+ + L
Sbjct: 93 NTLMKALCRAHQVRTAVLMLEEMSSRGV-APDETTFTTLMQGFVEEGSIEAA------LR 145
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFA 114
V +R L C ++ + +L L +I++ + I N +
Sbjct: 146 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 205
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ + AL + D + PD+ TYNIV++ L + G++ + M + G +PD
Sbjct: 206 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 265
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++NTL+ L RL+ L R++ G+ PD+ T+ LI++ + G+ +LRLF +M
Sbjct: 266 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
K P Y +LIDNL +GK+ A+ + ++M S+
Sbjct: 326 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 363
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D L ++ +VQ + N ++ K+ Q+E+A I + +
Sbjct: 197 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 256
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C PD+ T+N ++ L R+ + L+ + GV PD ++N L+N L K+
Sbjct: 257 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 316
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L L F EM SG PD +TY LID+ G + ++L L DM+ S Y ++I
Sbjct: 317 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 376
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
D L K +++ A +F++M+
Sbjct: 377 DGLCKKMRIEEAEEVFDQMD 396
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 10/281 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY CK G V A+ +Q + F P+ YN + + + + + +++ ++
Sbjct: 167 NGY----CKLGRVEDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + ++V I N +I A ++E
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 281
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + PD+ T+NI+++ L +VG + L F MK +G PD ++YNTL+
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 341
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+NL + +L L ++M +G +TY +ID + IEE+ +F+ M Q I
Sbjct: 342 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 401
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
+ + +LID L K K+D A FE +N +S+ P +
Sbjct: 402 RNAITFNTLIDGLCKDKKIDDA---FELINQMISEGLQPNN 439
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 9/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLL----QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N ++ LC+ +V A++++ Q D ++F YN V+ + ++ + IL
Sbjct: 198 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLEEAKGILNQ 254
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV-VQIASPESIIVVNRIIFAFAKSR 117
++ + A + + L +V V+ SP+ + N +I A K
Sbjct: 255 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD-VYTFNILINALCKVG 313
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
AL +F+ +K C PD +TYN ++D L +G++ L+ M+ G I+YN
Sbjct: 314 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 373
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T+++ L K R++ F +M GI + +T+ LID + I+++ L N M +
Sbjct: 374 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 433
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++P+ Y S++ + K G + A I E M ++
Sbjct: 434 GLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 468
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I LC + A+ L + + K + P+ Y N ++ A + D L+ ++ +++
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVS-PDVYTFNILINALCKVGDPHLALRLFEEMK 326
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T Y + L ++++ P S I N II K +IE
Sbjct: 327 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + + IT+N ++D L + +++D M G+ P+ I+YN++L
Sbjct: 387 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 446
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + M +G + D++TY LI+ + G + +L++ M+ + +R
Sbjct: 447 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 506
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
P+ Y ++ +L + + A+++F EM +++ P D
Sbjct: 507 PTPKAYNPVLQSLFRRNNIRDALSLFREM----AEVGEPPD 543
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + A +L + D+ LP+ +N ++ A N ++ + + + V+ + +
Sbjct: 239 LCKNGQLEEAKGILNQMVDRGC-LPDITTFNTLIAALCTGNRLEEALDLARQ--VTVKGV 295
Query: 67 SSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S D YT A D L EE+ + N +I ++ KAL
Sbjct: 296 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 355
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ ++ C ITYN ++D L + R+ + F M G+ + I++NTL++ L
Sbjct: 356 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 415
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K +++D +M G++P+ +TY +++ + + G+I+++ + M +
Sbjct: 416 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 475
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L K G+ +A+ + M
Sbjct: 476 TYGTLINGLCKAGRTQVALKVLRGM 500
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G+ A+RL + +++ P+ YN ++ + + +LKD+ +
Sbjct: 306 INALCKVGDPHLALRLFEEMKNSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIF-IEEVVQIASPESI----IVVNRIIFAFAKSRQ 118
S+ Y I+ C ++ I EEV + I I N +I K ++
Sbjct: 365 CPRSTITYNT-----IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 419
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ A + + + +P+ ITYN +L + G + + +M G D ++Y T
Sbjct: 420 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K R + L R M G++P Y ++ S R NI ++L LF +M +
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539
Query: 239 IRPSIYVYRSLIDNLKKMG 257
P Y+ + L + G
Sbjct: 540 EPPDALTYKIVFRGLCRGG 558
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ A ++ Q+ A+L+ + + PD T+ ++ G + L A
Sbjct: 89 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 148
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G ++ N L+N K+ R++ L Y ++ G +PD +TY ++ +
Sbjct: 149 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 208
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +L++ + M Q+ P ++ Y +++ L K G+++ A I +M
Sbjct: 209 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 92/182 (50%), Gaps = 2/182 (1%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL-LIFDHIKGL-KCKPDLITYNIVLD 146
+ + E+ + + VV+ + ++ + + A+ LI + ++ L + D + YN +L+
Sbjct: 3 VLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLN 62
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+L ++ + + ++ M G+ PD +++NTL+ L + ++ ++ EM G+ P
Sbjct: 63 VLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAP 122
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D T+T L+ F G+IE +LR+ M + + LI+ K+G+V+ A+
Sbjct: 123 DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYI 182
Query: 267 EE 268
++
Sbjct: 183 QQ 184
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%)
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G+ D + YN LLN L + ++ L + EMG GIKPD++T+ L+ + R + +
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + +M + + P + +L+ + G ++ A+ + M
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 150
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 104/194 (53%)
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
F D + +E+ + S++ N +I + +S+ +E+ ++ ++ +
Sbjct: 234 HGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERIS 293
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ TY+ +++ L + RV + F M E G+VP+ +++ TL++ K ++DL L
Sbjct: 294 PDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRN 353
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F M + GI+PDL+TY ALI+ R G+++E+ +L N+M +P + +L+D K
Sbjct: 354 FEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCK 413
Query: 256 MGKVDLAMTIFEEM 269
G +D A+ I + M
Sbjct: 414 DGDMDSALEIKDRM 427
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 5/237 (2%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLS---SDCYTNFARAFIMTDDCTQLLIFIE 92
++ +++A ++ I+ + Q L+ LV S C R + F
Sbjct: 158 FDALIIAYTDSEFIEDAIQCLR--LVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYL 215
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
EV+ P ++ + N ++ F K + A ++FD I +P ++++N ++ R
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V + + M+ + PD +Y+ L+N L K R++ F EM E G+ P+ +T+T
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LID + G I+ +LR F MK + IRP + Y +LI+ L + G + A + EM
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ CK G+V A + + + + P+ ++N ++ + +++ F +LK ++ S
Sbjct: 233 MHGFCKIGDVMNARMVFDEISRRGL-RPSVVSFNTLISGYCRSKNVEEGF-VLKSVMESE 290
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R +S D +T A ++ C + + +E+ ++ + + +I K +
Sbjct: 291 R-ISPDVFTYSA---LINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGK 346
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ AL F+ +K +PDLITYN +++ L R G + + M G PD I++ T
Sbjct: 347 IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTT 406
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K +D L M E GI+ D + +TALI R G + ++ R+ DM
Sbjct: 407 LMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAG 466
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P Y +ID K G V + + +EM
Sbjct: 467 HKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM 497
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 93/174 (53%), Gaps = 1/174 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ + + +I K ++E+A +FD + + P+ +T+ ++D + G+++ L
Sbjct: 293 SPD-VFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLAL 351
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F MK+ G+ PD I+YN L+N L + L EM +G KPD +T+T L+D
Sbjct: 352 RNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGC 411
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ G+++ +L + + M ++ I + +LI L + G+V A + ++M S+
Sbjct: 412 CKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSA 465
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 112/277 (40%), Gaps = 10/277 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLS---FQILKDLL 60
I LCK V A L + + + +PN + ++ + IDL+ F+I+KD
Sbjct: 303 INGLCKESRVEEANGLFDEMCEMGL-VPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRG 361
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ Y D + + E++ I ++ K ++
Sbjct: 362 IRPDLIT---YNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMD 418
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL I D + + D + + ++ L R GRV D M AG PD +Y ++
Sbjct: 419 SALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVI 478
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + + +EM G P ++TY AL++ F + G ++ + L + M ++
Sbjct: 479 DCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVV 538
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
P+ + L+D K G + IF +SD A
Sbjct: 539 PNDITFNILLDGHCKHGS-SVDFKIFNGEKGLVSDYA 574
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ CK G++ +A+ + + ++ I L + A+ ++ + + ++LKD+L +
Sbjct: 408 MDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGH 467
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
YT F D ++E+ + ++ N ++ F K Q++ A +
Sbjct: 468 KPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKM 527
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVND--MLNEFASMKEAGVVPDFISYNTLLNN 182
+ + ++ P+ IT+NI+LD + G D + N E G+V D+ SY L+N
Sbjct: 528 LLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFN-----GEKGLVSDYASYTALVNE 582
Query: 183 LRKIRR 188
KI +
Sbjct: 583 SIKISK 588
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 89/245 (36%), Gaps = 35/245 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK G + A+R + ++D+ I P+ YN ++ D+ + ++L +++ +
Sbjct: 338 IDGQCKHGKIDLALRNFEIMKDRGI-RPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+T D L + +V+ + +I + ++ A
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + KPD TY +V+D + G V M+ G VP ++YN L+N
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516
Query: 184 RKIRRLDLCLIYFREM--------------------------------GESGIKPDLLTY 211
K ++ + M GE G+ D +Y
Sbjct: 517 CKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVSDYASY 576
Query: 212 TALID 216
TAL++
Sbjct: 577 TALVN 581
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+V+ + + NR+I ++ ++ + +A+ +F+ ++ CKPD +TY ++DI
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+ G+ PD +Y+ ++N L K L F EM + G P+L+
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY ++D + N + +L+L+ DM+ P Y +++ L G ++ A +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 78/139 (56%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+P+ +TYN ++ GR +N+ +N F M+EAG PD ++Y TL++ K LD+ +
Sbjct: 395 CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
++ M G+ PD TY+ +I+ G+ G++ + +LF +M Q P++ Y ++D
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K A+ ++ +M ++
Sbjct: 515 AKARNYQNALKLYRDMQNA 533
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + C P+L+TYNI++D+ + + L + M+ AG
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM + PD Y L+D +G+ GN+E++
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M +RP++ SL+ ++ K+ A + + M
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q +P +++ N ++ AK+R + AL ++ ++ +PD +TY+IV+++L
Sbjct: 491 LFCEMVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + F M++ +PD Y L++ K ++ +++ M +G++P++
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV 609
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R I E+ L +M +RPS+ Y L+
Sbjct: 610 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 135 KPDLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
K D TY ++ LGR G +N +L+E M G P+ ++YN L+++ + L+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDE---MVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ F +M E+G KPD +TY LID + G ++ ++ ++ M+ + P + Y +I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K G + A +F EM
Sbjct: 478 CLGKAGHLPAAHKLFCEM 495
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ NL + ++ EM G +P+ +TY LI S+GR +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ +FN M++ +P Y +LID K G +D+AM +++ M +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 5/260 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I++ CK G + A +L + K + L YNC++ A + + + + D+ SS+
Sbjct: 56 IDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM--SSK 113
Query: 65 TLSSDCYTNFARAFIM--TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
D +T + F + + + L ++++ + I N +I AF + +++A
Sbjct: 114 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 173
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L + + + C D ITYN ++ L R G + L F M G+ P+ IS N L+N
Sbjct: 174 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 233
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + + L + R+M G+ PD++TY +LI+ +TG +E+L LF+ ++ + I P
Sbjct: 234 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 293
Query: 243 IYVYRSLIDNLKKMGKVDLA 262
Y +LI K G D A
Sbjct: 294 AITYNTLISWHCKEGMFDDA 313
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N I LCK V A+ + + K +IF +N ++ + N + + + +D
Sbjct: 88 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIF---TFNSLIFGLCKVNKFEEALGLYQD 144
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L+ ++ Y AF+ + L + +++ P I N +I A ++
Sbjct: 145 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 204
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
IEK L +F+ + P+ I+ NI+++ L R G + L M G+ PD ++YN+
Sbjct: 205 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 264
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K R L F ++ GI PD +TY LI + G +++ L +
Sbjct: 265 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 324
Query: 239 IRPSIYVYRSLIDNLKKMG 257
P+ + L+ N K G
Sbjct: 325 FIPNEVTWYILVSNFIKEG 343
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A K +++ AL +F + CKPD+ T+N ++ L +V + + L + M
Sbjct: 88 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 147
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV+ + I+YNTL++ + + L +M G D +TY LI + R GNIE+
Sbjct: 148 EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 207
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L LF DM + + P+ LI+ L + G + A+ +M
Sbjct: 208 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 250
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E ++ + I N +I K + A + + ++ C+P++ITY I++D +
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 152 GR-----------------------------------VNDMLNEFASMKEAGVVPDFISY 176
GR V D LN F M G PD ++
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L+ L K+ + + L +++M G+ + +TY LI +F R G ++E+L+L NDM
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y LI L + G ++ + +FE+M S
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 217
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 14/280 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + AA + K P+ +N ++ +D ++L ++ +
Sbjct: 365 IDGFCKQNRLDAAEHMFYLTPTKGCS-PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 423
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT F D ++E++ +++ N ++ + +++ AL
Sbjct: 424 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDAL 483
Query: 124 LIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+F ++ K +PD+ TYNI++ L G+ + + M G+VPD
Sbjct: 484 EMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+Y+++++ L K RLD F MG PD++T+ LI + + G +++ L LF
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFC 603
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M Q+ I Y +LI +K+ +D A+ IF+EM SS
Sbjct: 604 EMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISS 643
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 135/282 (47%), Gaps = 8/282 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDLL 60
++ +CK G+ +A+ LL+ + + + +PN YN + L +D F +++
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKE 283
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ +C N F ++ + ++E+++ ++ + +I AF K +
Sbjct: 284 IFPDIVTYNCMIN---GFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFF 340
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++D + P +TY+ ++D + R++ + F G PD I++NTL+
Sbjct: 341 EAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLI 400
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +R+D + EM E+G+ + +TYT LI F + G++ + L +M +
Sbjct: 401 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVC 460
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
P++ +L+D L GK+ A+ +F+ M S D+ + F
Sbjct: 461 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPF 502
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 27/271 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVSS 63
I C+ G+++AA LLQ + + PN C +L + + + ++ K + S
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGV-CPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
M D ++ +E VQ N +I + +A
Sbjct: 494 ----------------MDIDASRPFNGVEPDVQ--------TYNILICGLINEGKFLEAE 529
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+++ + PD ITY+ ++D L + R+++ F SM PD +++NTL+
Sbjct: 530 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGY 589
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +D L F EMG+ GI D +TY LI F + NI+ +L +F +M + P
Sbjct: 590 CKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDT 649
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
R+++ L +++ A+ + E++ S+
Sbjct: 650 ITIRNMLTGLWSKEELERAVAMLEDLQMSVG 680
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q+ P +++ ++ + ++ +A+ + D + +P+ ITY ++D + ++G
Sbjct: 176 QMCKP-NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 234
Query: 156 DMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
LN M+E + ++P+ + YNT+++ L K R F EM E I PD++TY +
Sbjct: 235 SALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCM 294
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+ F +G ++ +L +M +++I P + + +LI+ K GK A +++EM
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM 349
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 5/159 (3%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
F ++ AL F I L P ++T+N +L L R+++ L+ F M + P+
Sbjct: 126 FCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PN 181
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+++ TL+N L + R+ + M E G++P+ +TY ++D + G+ +L L
Sbjct: 182 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 241
Query: 233 DMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
M++ I P++ +Y ++ID L K G+ A +F EM
Sbjct: 242 KMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQ 280
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 102/234 (43%), Gaps = 23/234 (9%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN ++ LC G + A+ + ++++ + + AS N ++ Q L+
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDID--------ASRPFNGVEPDVQTYNILI- 516
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
C F+ ++ EE+ I + +I K ++++
Sbjct: 517 --------CGLINEGKFLEAEE------LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD + PD++T+N ++ + G V+D L F M + G+V D I+Y TL+
Sbjct: 563 ATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIY 622
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
RK+ +D L F+EM SG+ PD +T ++ +E ++ + D++
Sbjct: 623 GFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
++ I++ ++ L+ F + + G P +++NTLL+ L R+ L F +M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
KP+++T+T L++ R G + E++ L + M + ++P+ Y +++D + KMG
Sbjct: 178 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 260 DLAMTIFEEM 269
A+ + +M
Sbjct: 234 VSALNLLRKM 243
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 80/139 (57%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C PD++ YN V+D + G VN + F M + G+ PD ++Y+++++ L K R +D
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ R+M G+ PD TY LI + TG +E++R+F +M++Q I P + +L+
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+L K GK+ A +F+ M
Sbjct: 334 GSLCKYGKIKEARDVFDTM 352
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 4/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+V+ A L + + + I P+ Y+ V+ A + +D + L+ ++
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y N + T + + +E+ + + ++ +N ++ + K +I+
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + PD+ +Y I+L+ G + DM + F M G+ PD ++N L+
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 403
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
LD +I F EM + G+KP ++TY +I + R G +++++ FN M Q +
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV 463
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEE-MNSSL 273
P Y Y LI G + A + E MN+ +
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D + +E+VQ P ++ + ++ A K+R ++KA +
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD TYN ++ G+ + + F M+ ++PD ++ NTL+ +L K ++
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M G PD+ +YT +++ + G + + LF+ M I P IY + LI
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 403
Query: 251 DNLKKMGKVDLAMTIFEEM 269
G +D AM IF EM
Sbjct: 404 KAYANCGMLDKAMIIFNEM 422
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ G + A+ + +RD + P+ Y V+ A +D + + ++
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNEMRDHGV-KPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + F + I E++ I+ II K ++
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IFD + PD + YN+++D VG++ L F +M AG+ P+ + Y TL+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N KI R+D L FREM + GIKP + Y +ID G + F++M + I
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ++ L K D A+ +F+E+ +
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F + KA + I + D++ + +++ L ++GRV D N F G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD + YN L++ + +++ L F M +GI+P+++ Y L++ + + G I+E L
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF +M Q+ I+PS +Y +ID L + G+ A F EM S
Sbjct: 592 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 635
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD + G PD+ T+N+++ G ++ + F M++ GV P ++Y T++ L
Sbjct: 383 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+I ++D + F +M + G+ PD Y LI F G++ ++ L +++ +R I
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 502
Query: 245 VYRSLIDNLKKMGKVDLAMTIFE 267
+ S+I+NL K+G+V A IF+
Sbjct: 503 FFGSIINNLCKLGRVMDAQNIFD 525
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + + + L + +V +++ ++ + K +I++ L +F +
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
KP I YNI++D L GR +F M E+G+ + +Y+ +L L K R D
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F+E+ +K D++T +I +T +EE+ LF + + + P Y +I
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
NL K G V+ A +F M ++
Sbjct: 719 TNLLKEGLVEEAEDMFSSMQNA 740
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ G + A+ + D+ + +P+ AY+C++ + + +++ +++ +
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGV-VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + + + V + +V N ++ + ++EKAL
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD + +P+++ Y +++ ++GR+++ L+ F M + G+ P I YN +++ L
Sbjct: 557 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R + F EM ESGI + TY+ ++ + +E++ LF +++ ++ I
Sbjct: 617 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 676
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++I + + +V+ A +F ++ S
Sbjct: 677 ITLNTMIAGMFQTRRVEEAKDLFASISRS 705
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 7/233 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
+ NGY CK G + + L + + K I P+ YN ++ E + +
Sbjct: 577 LVNGY----CKIGRIDEGLSLFREMLQKGI-KPSTILYNIIIDGLFEAGRTVPAKVKFHE 631
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ S ++ Y+ R + + +E+ + II +N +I ++R+
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A +F I P +TY+I++ L + G V + + F+SM+ AG PD N
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
++ L K + Y ++ E + LT L+D F G E +R
Sbjct: 752 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 96/172 (55%), Gaps = 12/172 (6%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I+ N +I + + ++ AL I ++ + + D+ TYN + L RV R+++
Sbjct: 353 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHI 412
Query: 164 MKEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M E GVVP++++Y TL++ ++ + RRL FREM E G P ++TY +ID
Sbjct: 413 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRL------FREMAEKGATPSVVTYNVMIDG 466
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + G+I E+ R +M+++ P +Y Y SL+ GKVD+A+ +FEEM
Sbjct: 467 YTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEM 518
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVL---------------VASAETND 48
++ LCK+G V A RLL + + L NA YN +L + E
Sbjct: 184 VDGLCKSGRVDDARRLLDDMPRHGVSL-NALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242
Query: 49 IDLS---FQILKDLLVSSRTLS---------------SDCY--TNFARAFIMTDDCTQLL 88
I+ + + IL D L ++R +S D Y T A+ + +
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
++E V + +I F K Q+E A ++ ++G + I +N ++D
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G V+D L A+M++ GV D +YNTL L ++ RLD M E G+ P+
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 422
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TYT LI + G++ E+ RLF +M ++ PS+ Y +ID K G + A +E
Sbjct: 423 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKE 482
Query: 269 M 269
M
Sbjct: 483 M 483
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 117/260 (45%), Gaps = 1/260 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CK G + AA LL ++ + + L +N ++ +D + +I +
Sbjct: 324 INGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGV 383
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
L Y A + + + ++++ + + +I K + +A
Sbjct: 384 ELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARR 443
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F + P ++TYN+++D + G + + M++ G VPD +Y +L++
Sbjct: 444 LFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHC 503
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++D+ L F EM + G +P+++ YTALI + G E + +L++DM + + P
Sbjct: 504 VNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDS 563
Query: 245 VYRSLIDNLKKMGKVDLAMT 264
+Y +L+ +L + D+ ++
Sbjct: 564 LYSALVGSLHTDNRKDVKVS 583
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%)
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+ ++V+D L + GRV+D M GV + + YN+LL+ + +
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M GI+ + TYT L+DS +I + LFN+MK + +Y+Y ++I+ + G
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297
Query: 259 VDLAMTIFEE 268
+ A + +E
Sbjct: 298 MRRAAKVLDE 307
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 144/304 (47%), Gaps = 44/304 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK+GN S A++LL+ + +K PN AY ++ + + ++ + +L +++
Sbjct: 204 INGLCKSGNTSMALQLLRKMEEKGC-KPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV--D 260
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVV-------------------------- 95
R + D Y+ F + I E+V
Sbjct: 261 RGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSE 320
Query: 96 ----------QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ A P + N ++ + + Q+++A + D + C P + +YNI++
Sbjct: 321 ARCVFEAMTKKGAEPNAY-TYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILI 379
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ + R+++ + M E + PD ++Y+TL+ L ++ R L F+EM SG+
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL 439
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PDL+TY+ L+D + G+++E+L+L M++ +I P I +Y LI+ + GK+++A +
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499
Query: 266 FEEM 269
F ++
Sbjct: 500 FSKL 503
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 38/266 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G VS A + +++ K PNAY N ++ N +D + ++L
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGA-EPNAYTYNALMDGYCLNNQMDEAQKVLD------ 361
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
IM D + N +I + K R++++A
Sbjct: 362 ---------------IMVDK--------------GCAPVVHSYNILINGYCKRRRLDEAK 392
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + PD +TY+ ++ L +VGR + LN F M +G++PD ++Y+TLL+ L
Sbjct: 393 SLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGL 452
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K LD L + M ES I+PD++ Y LI+ G +E + LF+ + I+P+I
Sbjct: 453 CKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTI 512
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I L K G D A +F +M
Sbjct: 513 RTYTIMIKGLLKEGLSDEAYELFRKM 538
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 90/177 (50%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+V+ +I + +I KS AL + ++ CKP+L+ Y ++D L +
Sbjct: 187 EMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDT 246
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
VND ++ + M + G+ PD ++Y+T+L+ + L+ I F EM + P+ +T+T
Sbjct: 247 LVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFT 306
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+D + G + E+ +F M ++ P+ Y Y +L+D ++D A + + M
Sbjct: 307 ILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 91/166 (54%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I N +I +I++A+ +F+ + +PD+I+Y+ V++ L + G + L
Sbjct: 163 ITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRK 222
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+E G P+ ++Y T++++L K ++ + EM + GI PD++TY+ ++ F G+
Sbjct: 223 MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGH 282
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E+ LFN+M + + P+ + L+D L K G V A +FE M
Sbjct: 283 LNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV--GRVNDML 158
++ +N +I + + A+ + + L +PD IT+N +++ GR G + + +
Sbjct: 125 HNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLIN--GRCIEGEIKEAV 182
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M G PD ISY+T++N L K + L R+M E G KP+L+ YT +IDS
Sbjct: 183 GLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSL 242
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + +++ L ++M + I P + Y +++ +G ++ A +F EM
Sbjct: 243 CKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM 293
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 90/168 (53%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S++ R + + AK +Q + + + + ++ + NI+++ L R+ V ++
Sbjct: 91 SVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVL 150
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G+ PD I++NTL+N + + F EM G +PD+++Y+ +I+ ++
Sbjct: 151 GKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKS 210
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
GN +L+L M+++ +P++ Y ++ID+L K V+ AM + EM
Sbjct: 211 GNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 80/159 (50%)
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
F S I+ AL F + + +P ++ + L + + + + +++ M GV
Sbjct: 65 FLSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVT 124
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+ S N L+N L ++ + + +M + GI+PD +T+ LI+ G I+E++ L
Sbjct: 125 HNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGL 184
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
FN+M ++ +P + Y ++I+ L K G +A+ + +M
Sbjct: 185 FNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM 223
>gi|341605745|gb|AEK82975.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRXNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 40/278 (14%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN I+ C+ G V A+ L+ ++ + IF PN YN V+ + + + ++ L
Sbjct: 503 CNVIIDAHCREGRVEEALNLMNEMQTQGIF-PNLFTYNAVINRLCKERKSERALELFP-L 560
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ L S ++V + +I FAK
Sbjct: 561 MLKRNVLPS----------------------------------VVVYSTLIDGFAKQSNS 586
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KAL+++ + + PD++ Y I+++IL R+ + N F M E G+ PD ISY ++
Sbjct: 587 QKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSV 646
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ +I + F EM + G P ++TYT+L+D + + I+ + L ++MK++ I
Sbjct: 647 IAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGI 706
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
P + Y LI ++ G +D A+ + EM N L D
Sbjct: 707 TPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G+V + L++ ++ N+ P+ +Y+ + + D+S I +DL +
Sbjct: 367 IHGFCKQGDVEKGLYLIEEMKYSNM-EPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAG 425
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ + F M D +EE+V+ ++ F K AL
Sbjct: 426 YKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNAL 485
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F+ + P + T N+++D R GRV + LN M+ G+ P+ +YN ++N L
Sbjct: 486 EFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRL 545
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R+ + L F M + + P ++ Y+ LID F + N +++L L+ M + + P +
Sbjct: 546 CKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDM 605
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y LI+ L ++ A +F++M +
Sbjct: 606 VAYTILINILCHRSRMCEAYNLFKKMTEN 634
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 5/268 (1%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
YI LC+ G V +A+ ++SL N + YN ++ + ++D + ++L+++ S
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEM--KS 353
Query: 64 RTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+S D YT F D + L IEE+ S++ + + K R +
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+L IF + K D Y+I++ G ++ M + PD ++ +L++
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH 473
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K+ L +F M E GI P + T +ID+ R G +EE+L L N+M+ Q I P
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFP 533
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ Y ++I+ L K K + A+ +F M
Sbjct: 534 NLFTYNAVINRLCKERKSERALELFPLM 561
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 48 DIDL--SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIV 105
DID + +IL+++ + + + Y+ + L F+ ++ ++
Sbjct: 268 DIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYC 327
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
N II K ++++AL + + +K PD+ TY+I++ + G V L MK
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ + P +SY++L + L K R D+ L FR++G +G K D Y+ LI F G+++
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLD 447
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +L +M + + P + SL+ KMG A+ F M
Sbjct: 448 SAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMM 491
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P ++TY+ + L RVG V L+ S+ A + + YN +++ L K LD L
Sbjct: 288 PTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKV 347
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
EM GI PD+ TY+ LI F + G++E+ L L +MK + PS+ Y SL L K
Sbjct: 348 LEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCK 407
Query: 256 MGKVDLAMTIFEEMNSS 272
D+++ IF ++ ++
Sbjct: 408 KRLSDISLDIFRDLGAA 424
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL--GRVG-------RVNDMLNEF 161
A A R+ ++L F+ +K P++ TY I+++ G G + ++L E
Sbjct: 224 LAEANRREFLRSL--FEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEE- 280
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+ G P ++Y+T + L ++ ++ L + R + + ++ Y A+I +
Sbjct: 281 --MERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKK 338
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G ++E+L++ +MK I P +Y Y LI K G V+ + + EEM S
Sbjct: 339 GELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYS 389
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 143 IVLDILGRVGRVNDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
IV D+L +V N ML F K+ G+ S N LL L + R + F E
Sbjct: 180 IVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEE 239
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEE-------SLRLFNDMKQQQIRPSIYVYRSLID 251
M +G P++ TYT +++ + + GN E + + +M++ P++ Y + I
Sbjct: 240 MKSTGPPPNVFTYTIMMNFYCK-GNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298
Query: 252 NLKKMGKVDLAM 263
L ++G V+ A+
Sbjct: 299 GLCRVGYVESAL 310
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 87/155 (56%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A+ FD + +C PD +TY+ ++D+ G+VG+ ++ + + S+K++G PD ++Y T+
Sbjct: 95 DAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTM 154
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + + + F EM SGI+P + Y +I GR G + +L++F +MKQ +
Sbjct: 155 VRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGV 214
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+P+ ++++ + GKV + IF M L+
Sbjct: 215 KPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQDLA 249
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 91/171 (53%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I N ++ + +Q E + I + + +PD ITY+ ++ R + + F
Sbjct: 42 NIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWF 101
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M +A VPD ++Y+T+++ K+ + D + + + +SG KPD +TY ++ FGR
Sbjct: 102 DRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRA 161
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G I ++ +F++MK I+P VY +I L + G++ A+ +F+EM +
Sbjct: 162 GYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQA 212
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 34/203 (16%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ ++ F ++ I A+ IFD +KG +P + YNI++ LGR GR+ L F
Sbjct: 149 VTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQE 208
Query: 164 MKEAGVVP----------------------------------DFISYNTLLNNLRKIRRL 189
MK+AGV P D I YN ++ R+ +
Sbjct: 209 MKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQDLACDIIVYNAVIKMCREAGLV 268
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
Y REM E G +P+ TY +I + + G E+ R+F+ + + +P + Y SL
Sbjct: 269 PEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSL 328
Query: 250 IDNLKKMGKVDLAMTIFEEMNSS 272
+ + I EM S+
Sbjct: 329 LQGYGNAKDYEKVQEILHEMVSA 351
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G AV L +S++ K+ + P+ Y ++ I + I ++ S S
Sbjct: 125 KVGKYDEAVALYESVK-KSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGS 183
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y L +E+ Q + + ++ ++ +++S ++ + L IF H
Sbjct: 184 VVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHH 243
Query: 129 IKG-LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
++ L C D+I YN V+ + G V + M E G P+ +Y +++ K
Sbjct: 244 MRQDLAC--DIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNG 301
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
F ++ E+G +PD+++YT+L+ +G + E+ + ++M P
Sbjct: 302 MAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAP 355
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 18/267 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ CK+GN+ A ++ +R A+ D+D+ F+I ++
Sbjct: 601 IDGYCKSGNIEKACQIYARMR---------------GDADIPDVDMYFKIKNNVAEKPNV 645
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
++ Y +E + + IV + +I F K+ ++++A +
Sbjct: 646 VT---YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F + P++ TY+ ++D L + R++ +L + M E P+ + Y +++ L K
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ + D M E G KP+++TYTA+ID FG+ G +++ L LF +M + P+
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y LI++ G +D A + EEM +
Sbjct: 823 YTVLINHCCATGHLDEAYALLEEMKQT 849
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 25/291 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDI------DLSFQ 54
N + CK+ + S A +LL+ + +K P YN ++ + ++ +L+ +
Sbjct: 382 NSLVHAYCKSDDFSYAYKLLKKM-EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEK 440
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
++L + L+ +FAR + I E++ + +I
Sbjct: 441 AYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLC 500
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ ++E A +F +KG PD+ TY I++D + G + N M G P +
Sbjct: 501 NASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVV 560
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K +++ + F M G P+++TYTALID + ++GNIE++ +++ M
Sbjct: 561 TYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Query: 235 KQQ----------------QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +P++ Y +L+D L K KV A + E M
Sbjct: 621 RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETM 671
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 59/314 (18%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVS 62
+ + LCK G A+ L++ K F+PN YN ++ E + + + L
Sbjct: 282 FAQALCKVGKWREALSLIE----KEDFVPNTILYNKMISGLCEASFFEEAMDFL------ 331
Query: 63 SRTLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPE----SIIVVNRIIFAFAKS 116
+R S+ C N I+ C + L + ++ + E S + N ++ A+ KS
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV-------------NDMLNE--- 160
A + ++ +CKP + YNI++ + G + N+ML+
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTV 451
Query: 161 ---------------FASMKEA----------GVVPDFISYNTLLNNLRKIRRLDLCLIY 195
F ++A G VPD +Y+ ++ L R++
Sbjct: 452 LNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F+EM +G+ PD+ TYT LID F + G I+++ ++M + P++ Y +LI K
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571
Query: 256 MGKVDLAMTIFEEM 269
KV +A +FE M
Sbjct: 572 AKKVSVANELFELM 585
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 112/309 (36%), Gaps = 79/309 (25%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I+ CKA + A + + ++ + PN Y + D +DL ++L +L +S
Sbjct: 687 IDGFCKAAKLDEAQEVFHKMVERG-YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745
Query: 64 RTLSSDCYTNFARAF---IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT TD+ +L++ +EE +++ +I F K+ +++
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEK---GCKPNVVTYTAMIDGFGKAGKVD 802
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA------------- 167
K L +F + C P+ +TY ++++ G +++ MK+
Sbjct: 803 KCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVI 862
Query: 168 --------------------GVVPDFISYNTLLNNLRKIRRLDLCL-------------- 193
G P + Y L++N K RL++ L
Sbjct: 863 EGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMT 922
Query: 194 ---------IY--------------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
IY F +M G+ PDL T+ L+ R EE+L+L
Sbjct: 923 AKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982
Query: 231 FNDMKQQQI 239
+ + Q I
Sbjct: 983 SDSLCQMDI 991
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+++ R G N L E +K+ G P ++YN L+ + +LD + REM E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G+ D T + + G E+L L ++++ P+ +Y +I L + +
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGLCEASFFEE 326
Query: 262 AMTIFEEMNSS 272
AM M S+
Sbjct: 327 AMDFLNRMRST 337
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 6/143 (4%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ I YN ++ L + ++ M+ +P+ +Y LL ++L C
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
M G P + +L+ ++ ++ + + +L M++ + +P VY LI ++
Sbjct: 366 LSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICS 425
Query: 256 MGKV------DLAMTIFEEMNSS 272
G++ +LA + EM S+
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSA 448
>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
Length = 849
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ LCK+ + + +LL+ + + + YN + D + ++L+++
Sbjct: 494 NNLIDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIELLREMRG 553
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T + + F+ ++V I+ + + K ++++
Sbjct: 554 HGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCEGFLPDIVSYSAAMDGLVKINKLDR 613
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL +F I C+PD++++NI++ + G+VN+ N M+ AG+VP +SYN L+N
Sbjct: 614 ALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLIN 673
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K +D ++ +M E KP +++YT LI+ +G +++ L+N+M+++ P
Sbjct: 674 EWCKNGDIDKAILCLSQMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSP 733
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +++ L K GK D A+ + M
Sbjct: 734 NRITYMAIVHGLCKCGKPDEALVYYHSM 761
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 21/289 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL-----RDKNI-----------FLPN--AYNCVLVASA 44
N ++ L AG V + LLQ + R NI LPN ++N V+
Sbjct: 404 NSVLKFLVNAGKVESTCYLLQLMMGNESRSDNIHILDIHQTFKKLLPNTASFNIVIHGLL 463
Query: 45 ETN---DIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPE 101
+T D D + + +D++ Y N A +D + + ++ Q
Sbjct: 464 KTTSKLDQDAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKLLRDMEQSRLQP 523
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+ N I + A+ + ++G +P + +++ L + GR + N
Sbjct: 524 THFTYNSIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFL 583
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A M G +PD +SY+ ++ L KI +LD L F+++ G +PD++++ LI + +
Sbjct: 584 ADMVCEGFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKA 643
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G + E+ + M+ + PS Y LI+ K G +D A+ +MN
Sbjct: 644 GKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMN 692
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 119 IEKALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+E+A +FD ++ + C P+ +YN +L+IL + ++ + N MK+ G D +
Sbjct: 173 VEEANYLFDQVRSMDLCIPNNYSYNCLLEILSKTNSIDSIENRLMEMKDFGWEVDKYTLT 232
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L + D LI F +M E G D ++ L +F + G ++ +++ + M+ Q
Sbjct: 233 PVLMAYCNAGKFDKALIVFNDMHERGWV-DGYVFSILALAFSKWGEVDRTMQFIDRMEDQ 291
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+ + + +LI K + D+A+
Sbjct: 292 NLMLNGKTFYALIHGFVKESREDMALK 318
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+ L LG VG V + F ++ + +P+ SYN LL L K +D EM +
Sbjct: 162 VFLRCLGSVGLVEEANYLFDQVRSMDLCIPNNYSYNCLLEILSKTNSIDSIENRLMEMKD 221
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G + D T T ++ ++ G +++L +FNDM ++ YV+ L K G+VD
Sbjct: 222 FGWEVDKYTLTPVLMAYCNAGKFDKALIVFNDMHERGWVDG-YVFSILALAFSKWGEVDR 280
Query: 262 AMTIFEEM 269
M + M
Sbjct: 281 TMQFIDRM 288
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/173 (17%), Positives = 74/173 (42%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
++N ++ + ++ ++ L + V+ S+ Y + D + ++ + ++
Sbjct: 632 SHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQM 691
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ +II +I S + + A ++++ ++ C P+ ITY ++ L + G+
Sbjct: 692 NEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCGKP 751
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
++ L + SM+E + PD L++ + +E E G PD
Sbjct: 752 DEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIPD 804
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 104/250 (41%), Gaps = 42/250 (16%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
++ L G V A L +R ++ +PN +YNC+L ++TN ID +
Sbjct: 163 FLRCLGSVGLVEEANYLFDQVRSMDLCIPNNYSYNCLLEILSKTNSID---------SIE 213
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+R + M D F EV + + ++ A+ + + +KA
Sbjct: 214 NRLME------------MKD-------FGWEVDK-------YTLTPVLMAYCNAGKFDKA 247
Query: 123 LLIFD--HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
L++F+ H +G D ++I+ + G V+ + M++ ++ + ++ L+
Sbjct: 248 LIVFNDMHERGWV---DGYVFSILALAFSKWGEVDRTMQFIDRMEDQNLMLNGKTFYALI 304
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K R D+ L +M + G D+ Y LI + E+++ LF MK I
Sbjct: 305 HGFVKESREDMALKLLEKMLKLGFTLDVSIYDVLIGGLCKKRAFEKAMALFFKMKMLGIT 364
Query: 241 PSIYVYRSLI 250
P + + L+
Sbjct: 365 PDVQILAKLV 374
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 137/301 (45%), Gaps = 36/301 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
IE C+ NV LL ++ +NI + P Y V+ + D+D ++ I+K+++ S
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT + F+ + ++E+ + I N +I +K++++++A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 125 IFDHIKGLKCKPDLITYNI-----------------------------------VLDILG 149
+ KP+ TY +++
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+V + + + SM + G++ D +Y L+N L K ++D FREM GI PD+
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y LI+ F + GN++++ +F++M ++ + P++ +Y L+ + G+++ A + +EM
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 270 N 270
+
Sbjct: 689 S 689
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 135/283 (47%), Gaps = 11/283 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL- 59
N I L KA + A L + + N PNA Y + E ++ + + +K++
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
++ ++ L + + + + + C+ +++ + + +++N + K+
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF----KN 605
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++ A IF ++G PD+ +Y ++++ ++G + + F M E G+ P+ I Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N LL + ++ EM G+ P+ +TY +ID + ++G++ E+ RLF++MK
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
+ + P +VY +L+D ++ V+ A+TIF + P
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 125/254 (49%), Gaps = 3/254 (1%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A+R+L+ ++++ I P+ YN +++ ++ +D + L +++ + ++ Y F
Sbjct: 471 AMRVLKEMKEQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
+I + +++E+ + + ++ +I + K ++ +A + +
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
D TY ++++ L + +V+D F M+ G+ PD SY L+N K+ +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EM E G+ P+++ Y L+ F R+G IE++ L ++M + + P+ Y ++ID K
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 256 MGKVDLAMTIFEEM 269
G + A +F+EM
Sbjct: 710 SGDLAEAFRLFDEM 723
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 47/311 (15%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND-IDLSFQILKDL 59
+C G I + CK G V A +S+ D+ I VL+ ND +D + +I +++
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 60 LVSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ ++ D Y F + + +E+V+ ++I+ N ++ F +S
Sbjct: 619 --RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 118 QIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+IEKA + D +KGL P+ +TY ++D + G + + F MK G+VPD
Sbjct: 677 EIEKAKELLDEMSVKGL--HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 176 YNTLLNNLRKIRRLDLCLIYFR---------------------EMGESGI---------- 204
Y TL++ ++ ++ + F + G++ +
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Query: 205 -------KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
KP+ +TY +ID + GN+E + LF+ M+ + P++ Y SL++ KMG
Sbjct: 795 GSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 258 KVDLAMTIFEE 268
+ +F+E
Sbjct: 855 RRAEMFPVFDE 865
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ L K N AA L+ + I + P Y+C + ++ ++ + + ++ S
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 65 TLSSDCYTNFARAFIMTDDCTQ---LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + + + Q LL+ +++ + SP + ++ S ++
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT---YGTVVKGMCSSGDLDG 435
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A I + C+P+++ Y ++ + R D + MKE G+ PD YN+L+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K +R+D + EM E+G+KP+ TY A I + + + +M++ + P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + LI+ K GKV A + + M
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSM 583
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 23/277 (8%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C++G + A LL + K + PNA Y ++ ++ D+ +F++ ++ +
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLH-PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 67 SSDCYTNFARAFIMTDDCTQL-----LIFIEEVVQIASPESIIVVNRII---FAFAKSRQ 118
S YT + D C +L I I + S N +I F F K+
Sbjct: 731 DSFVYTT------LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 119 IEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ L + D KP+ +TYNI++D L + G + F M+ A ++P I+Y
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+LLN K+ R F E +GI+PD + Y+ +I++F + G ++L L + M +
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 238 Q-----IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ SI R+L+ K+G++++A + E M
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 42/202 (20%)
Query: 113 FAKSRQIEKALLIFDHIKGLK----CK---PDLITYNIVLDILGRVGRVNDMLNEFASMK 165
F ++ A L D LK CK P TY++++D L ++ R+ D + M
Sbjct: 245 FKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLD------------------------LCLI------- 194
GV D +Y+ L++ L K R D +C++
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 195 ----YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M SG+ P Y +LI+ + R N+ + L +MK++ I S Y Y +++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
+ G +D A I +EM +S
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIAS 446
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
IE+A+ +F GL+ P L ++LD L R R++ + + M E VV D +Y+
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226
Query: 179 LL-----------------NNLRKIRRLDLCLIYFREMGES----GIKPDLLTYTALIDS 217
L+ ++ R L + ++ ES G+ P TY LID
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDG 286
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +E++ L +M + + Y LID L K D A + EM S
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 80/139 (57%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C PD++ YN V+D + G VN + F M + G+ PD ++Y+++++ L K R +D
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ R+M G+ PD TY LI + TG +E++R+F +M++Q I P + +L+
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+L K GK+ A +F+ M
Sbjct: 334 GSLCKYGKIKEARDVFDTM 352
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 4/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+V+ A L + + + I P+ Y+ V+ A + +D + L+ ++
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y N + T + + +E+ + + ++ +N ++ + K +I+
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + PD+ +Y I+L+ G + DM + F M G+ P ++N L+
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 403
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
LD +I F EM + G+KP ++TY +I + R G +++++ FN M Q +
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV 463
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEE-MNSSL 273
P Y Y LI G + A + E MN+ +
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D + +E+VQ P ++ + ++ A K+R ++KA +
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD TYN ++ G+ + + F M+ ++PD ++ NTL+ +L K ++
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M G PD+ +YT +++ + G + + LF+ M I P I + LI
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 403
Query: 251 DNLKKMGKVDLAMTIFEEM 269
G +D AM IF EM
Sbjct: 404 KAYANCGMLDKAMIIFNEM 422
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ G + A+ + +RD + P+ Y V+ A +D + + ++
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNEMRDHGV-KPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + F + I E++ I+ II K ++
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IFD + PD + YN+++D VG++ L F +M AG+ P+ + Y TL+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N KI R+D L FREM + GIKP + Y +ID G + F++M + I
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ++ L K D A+ +F+E+ +
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F + KA + I + D++ + +++ L ++GRV D N F G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD + YN L++ + +++ L F M +GI+P+++ Y L++ + + G I+E L
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF +M Q+ I+PS +Y +ID L + G+ A F EM S
Sbjct: 592 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 635
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + + + L + +V +++ ++ + K +I++ L +F +
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
KP I YNI++D L GR +F M E+G+ + +Y+ +L L K R D
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F+E+ +K D++T +I +T +EE+ LF + + + P Y +I
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
NL K G V+ A +F M ++
Sbjct: 719 TNLIKEGLVEEAEDMFSSMQNA 740
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ G + A+ + D+ + +P+ AY+C++ + + +++ +++ +
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGV-VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + + + V + +V N ++ + ++EKAL
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD + +P+++ Y +++ ++GR+++ L+ F M + G+ P I YN +++ L
Sbjct: 557 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R + F EM ESGI + TY+ ++ + +E++ LF +++ ++ I
Sbjct: 617 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 676
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++I + + +V+ A +F ++ S
Sbjct: 677 ITLNTMIAGMFQTRRVEEAKDLFASISRS 705
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 7/233 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
+ NGY CK G + + L + + K I P+ YN ++ E + +
Sbjct: 577 LVNGY----CKIGRIDEGLSLFREMLQKGI-KPSTILYNIIIDGLFEAGRTVPAKVKFHE 631
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ S ++ Y+ R + + +E+ + II +N +I ++R+
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A +F I P +TY+I++ L + G V + + F+SM+ AG PD N
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
++ L K + Y ++ E + LT L+D F G E +R
Sbjct: 752 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 137/301 (45%), Gaps = 36/301 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
IE C+ NV LL ++ +NI + P Y V+ + D+D ++ I+K+++ S
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT + F+ + ++E+ + I N +I +K++++++A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 125 IFDHIKGLKCKPDLITYNI-----------------------------------VLDILG 149
+ KP+ TY +++
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+V + + + SM + G++ D +Y L+N L K ++D FREM GI PD+
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y LI+ F + GN++++ +F++M ++ + P++ +Y L+ + G+++ A + +EM
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 270 N 270
+
Sbjct: 689 S 689
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 135/283 (47%), Gaps = 11/283 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL- 59
N I L KA + A L + + N PNA Y + E ++ + + +K++
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
++ ++ L + + + + + C+ +++ + + +++N + K+
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF----KN 605
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++ A IF ++G PD+ +Y ++++ ++G + + F M E G+ P+ I Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N LL + ++ EM G+ P+ +TY +ID + ++G++ E+ RLF++MK
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
+ + P +VY +L+D ++ V+ A+TIF + P
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 125/254 (49%), Gaps = 3/254 (1%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A+R+L+ ++++ I P+ YN +++ ++ +D + L +++ + ++ Y F
Sbjct: 471 AMRVLKEMKEQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
+I + +++E+ + + ++ +I + K ++ +A + +
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
D TY ++++ L + +V+D F M+ G+ PD SY L+N K+ +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EM E G+ P+++ Y L+ F R+G IE++ L ++M + + P+ Y ++ID K
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 256 MGKVDLAMTIFEEM 269
G + A +F+EM
Sbjct: 710 SGDLAEAFRLFDEM 723
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 47/311 (15%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND-IDLSFQILKDL 59
+C G I + CK G V A +S+ D+ I VL+ ND +D + +I +++
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 60 LVSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ ++ D Y F + + +E+V+ ++I+ N ++ F +S
Sbjct: 619 --RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 118 QIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+IEKA + D +KGL P+ +TY ++D + G + + F MK G+VPD
Sbjct: 677 EIEKAKELLDEMSVKGL--HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 176 YNTLLNNLRKIRRLDLCLIYFR---------------------EMGESGI---------- 204
Y TL++ ++ ++ + F + G++ +
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Query: 205 -------KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
KP+ +TY +ID + GN+E + LF+ M+ + P++ Y SL++ KMG
Sbjct: 795 GSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 258 KVDLAMTIFEE 268
+ +F+E
Sbjct: 855 RRAEMFPVFDE 865
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ L K N AA L+ + I + P Y+C + ++ ++ + + ++ S
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 65 TLSSDCYTNFARAFIMTDDCTQ---LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + + + Q LL+ +++ + SP + ++ S ++
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT---YGTVVKGMCSSGDLDG 435
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A I + C+P+++ Y ++ + R D + MKE G+ PD YN+L+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K +R+D + EM E+G+KP+ TY A I + + + +M++ + P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + LI+ K GKV A + + M
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSM 583
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 23/277 (8%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C++G + A LL + K + PNA Y ++ ++ D+ +F++ ++ +
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLH-PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 67 SSDCYTNFARAFIMTDDCTQL-----LIFIEEVVQIASPESIIVVNRII---FAFAKSRQ 118
S YT + D C +L I I + S N +I F F K+
Sbjct: 731 DSFVYTT------LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 119 IEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ L + D KP+ +TYNI++D L + G + F M+ A ++P I+Y
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+LLN K+ R F E +GI+PD + Y+ +I++F + G ++L L + M +
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 238 Q-----IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ SI R+L+ K+G++++A + E M
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 42/202 (20%)
Query: 113 FAKSRQIEKALLIFDHIKGLK----CK---PDLITYNIVLDILGRVGRVNDMLNEFASMK 165
F ++ A L D LK CK P TY++++D L ++ R+ D + M
Sbjct: 245 FKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLD------------------------LCLI------- 194
GV D +Y+ L++ L K R D +C++
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 195 ----YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M SG+ P Y +LI+ + R N+ + L +MK++ I S Y Y +++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
+ G +D A I +EM +S
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIAS 446
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 21/181 (11%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+ IE+A+ +F GL+ P L ++LD L R R++ + + M E VV
Sbjct: 160 GYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVF 219
Query: 172 DFISYNTLL-----------------NNLRKIRRLDLCLIYFREMGES----GIKPDLLT 210
D +Y+ L+ ++ R L + ++ ES G+ P T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y LID + +E++ L +M + + Y LID L K D A + EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 271 S 271
S
Sbjct: 340 S 340
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ + T L ++++ + +++ N II + K R + +A+ F +
Sbjct: 48 YSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMV 107
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD+ TY+ +L +GRVN+ + F M E V+P+ +++ L++ L K R +
Sbjct: 108 KEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMIS 167
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F M E G++PD+ TY AL+D + ++E+ +LFN M ++ P++ Y LI
Sbjct: 168 EAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILI 227
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
+ K G++D A + EM+
Sbjct: 228 NGHCKSGRIDEAKGLLAEMS 247
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 123/264 (46%), Gaps = 34/264 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+ C G V+ A L + + ++N+ +PN ++F IL D L R
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNV-IPN---------------KVTFTILIDGLCKKRM 165
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+S L+F E + + + N ++ + Q+++A +
Sbjct: 166 ISE-----------------AWLVF-ETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKL 207
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F+ + C P++ +YNI+++ + GR+++ A M + PD +Y+TL+ +
Sbjct: 208 FNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQ 267
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ R +EM G+ P+L+TY+ ++D + G+++E+ L M++ +I P+I++
Sbjct: 268 VGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFI 327
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI+ + GK++ A +F +
Sbjct: 328 YTILIEGMCTFGKLEAARELFSNL 351
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 13/274 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK GN + A++LL+ + +K PN AYN ++ + + + + +++
Sbjct: 52 INGLCKMGNTTMALQLLKKMEEKGC-KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG 110
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF-----AFAKSRQ 118
Y++ F + +++V E ++ N++ F K R
Sbjct: 111 IPPDVFTYSSILHGFCNLGRVNEATSLFKQMV-----ERNVIPNKVTFTILIDGLCKKRM 165
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I +A L+F+ + +PD+ TYN ++D ++++ F M G P+ SYN
Sbjct: 166 ISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNI 225
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N K R+D EM + PD+ TY+ L+ F + G +E+ L +M
Sbjct: 226 LINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYG 285
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P++ Y ++D L K G +D A + + M S
Sbjct: 286 LLPNLITYSIVLDGLCKHGHLDEAFELLKAMQES 319
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 92/169 (54%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N ++ +I A+ +FD + + +PD+ITY+ +++ L ++G L
Sbjct: 9 TLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLL 68
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+E G P+ ++YNT++++L K R + + +F EM + GI PD+ TY++++ F
Sbjct: 69 KKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNL 128
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G + E+ LF M ++ + P+ + LID L K + A +FE M
Sbjct: 129 GRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 94/179 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+V++ +I + II K AL + ++ CKP+++ YN ++D L +
Sbjct: 34 DEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKD 93
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
V + ++ F+ M + G+ PD +Y+++L+ + R++ F++M E + P+ +T+
Sbjct: 94 RLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTF 153
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
T LID + I E+ +F M ++ + P +Y Y +L+D ++D A +F M+
Sbjct: 154 TILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMD 212
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 80/138 (57%)
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
L +P L+T+N +L L ++ D + F M + G PD I+Y+T++N L K+ +
Sbjct: 4 LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
L ++M E G KP+++ Y +IDS + + E++ F++M ++ I P ++ Y S++
Sbjct: 64 ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 252 NLKKMGKVDLAMTIFEEM 269
+G+V+ A ++F++M
Sbjct: 124 GFCNLGRVNEATSLFKQM 141
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 42/271 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C + A +L ++ D+ PN +YN ++ ++ ID + +L ++
Sbjct: 189 NALVDGYCSRSQMDEAQKLF-NIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM- 246
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S ++L+ D Y+ R F Q+ P+ ++++
Sbjct: 247 -SHKSLTPDIFTYSTLMRGF----------------CQVGRPQ-------------EAQE 276
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ K + + + P+LITY+IVLD L + G +++ +M+E+ + P+ Y
Sbjct: 277 LLKEMCSYGLL------PNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTI 330
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + +L+ F + GI+P ++TYT +I + G E+ LF +M
Sbjct: 331 LIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNG 390
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y +I + G A+ + EEM
Sbjct: 391 CLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 62/106 (58%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M + G+ P +++NTLL+ L ++ + F EM + G +PD++TY+ +I+ + GN
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L+L M+++ +P++ Y ++ID+L K V AM F EM
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEM 106
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+ +++++ ++ ++ + +IE A+ +FD I G+ KP+++TY ++ L
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ +N + F M G P+ ++YN L+ L +I R R+M + I+P+++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+TALID+F + G + E+ L+N M Q + P ++ Y SLI+ L G +D A +F M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ + P + N ++ S Q +A + L +PDL+T+ +L+
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R+ D + F + G P+ ++Y TL+ L K R L+ + F +MG +G +P+++TY
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
AL+ G ++ L DM +++I P++ + +LID K+GK+ A ++ M
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++I +I AF K ++ +A +++ + + PD+ TY +++ L G +++ F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+ G P+ + Y TL++ K +R++ + F EM + G+ + +TYT LI +
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
G + + +FN M ++ P I Y L+D L GKV+ A+ IFE M D+
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK +++ AV L + N PN YN ++ E + +L+D++
Sbjct: 195 IRCLCKNRHLNHAVELFNQM-GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR 253
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ +T AF+ + ++Q++ + +I +++A
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ C P+ + Y ++ + RV D + F M + GVV + I+Y L+
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R D+ F +M PD+ TY L+D G +E++L +F M+++++ +I
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
Y +I + K+GKV+ A +F
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLF 456
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK-SRQIEKALLIFDHI 129
YT R + ++ S +++ N ++ + R + A L+ D +
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K + +P++IT+ ++D +VG++ + + M + V PD +Y +L+N L L
Sbjct: 251 K-RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
D F M +G P+ + YT LI F ++ +E+ +++F +M Q+ + + Y L
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
I +G+ D+A +F +M+S
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSS 391
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 9/213 (4%)
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
DL+ + L+ C+ N +D L ++++ + +++ +I K+R
Sbjct: 152 DLVTFTSLLNGYCHWN------RIEDAIALF---DQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ A+ +F+ + +P+++TYN ++ L +GR D M + + P+ I++
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ K+ +L + M + + PD+ TY +LI+ G ++E+ ++F M++
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P+ +Y +LI K +V+ M IF EM+
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 120/278 (43%), Gaps = 21/278 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCV-----------LVASAETNDIDL 51
N + LC+ G A LL+ + + I PN L+ + E ++ +
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRI-EPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ D+ ++ C + + D+ Q+ +E P +I +I
Sbjct: 286 QMSVYPDVFTYGSLINGLC------MYGLLDEARQMFYLMER--NGCYPNEVIYTT-LIH 336
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F KS+++E + IF + + ITY +++ VGR + F M P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D +YN LL+ L +++ L+ F M + + +++TYT +I + G +E++ LF
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + ++P++ Y ++I + G + A ++F++M
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT F + + E+ Q + I +I + + + A +F+ +
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ PD+ TYN++LD L G+V L F M++ + + ++Y ++ + K+ +++
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
F + G+KP+++TYT +I F R G I E+ LF MK+ P+ VY+
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 83/157 (52%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
Q AL +F + + P +I + +L ++ ++ R + +++ F M+ G+ P + N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ + + + +M + G +PDL+T+T+L++ + IE+++ LF+ +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+P++ Y +LI L K ++ A+ +F +M ++ S
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 15/278 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC+A V AV +L+ + + + P+ + ++ E I+ + L
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGV-APDETTFTTLMQGFVEEGSIEAA------LR 237
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFA 114
V +R L C ++ + +L L +I++ + I N +
Sbjct: 238 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 297
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ + AL + D + PD+ TYNIV++ L + G++ + M + G +PD
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++NTL+ L RL+ L R++ G+ PD+ T+ LI++ + G+ +LRLF +M
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
K P Y +LIDNL +GK+ A+ + ++M S+
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D L ++ +VQ + N ++ K+ Q+E+A I + +
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C PD+ T+N ++ L R+ + L+ + GV PD ++N L+N L K+
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L L F EM SG PD +TY LID+ G + ++L L DM+ S Y ++I
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
D L K +++ A +F++M+
Sbjct: 469 DGLCKKMRIEEAEEVFDQMD 488
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 7/274 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+ NGY CK G V A+ +Q + F P+ YN + + + + + +++
Sbjct: 257 LINGY----CKLGRVEDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ Y + + ++V I N +I A +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+AL + + PD+ T+NI+++ L +VG + L F MK +G PD ++YNT
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++NL + +L L ++M +G +TY +ID + IEE+ +F+ M Q
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I + + +LID L K K+D A + +M S
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISE 525
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 9/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLL----QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N ++ LC+ +V A++++ Q D ++F YN V+ + ++ + IL
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLEEAKGILNQ 346
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV-VQIASPESIIVVNRIIFAFAKSR 117
++ + A + + L +V V+ SP+ + N +I A K
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD-VYTFNILINALCKVG 405
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
AL +F+ +K C PD +TYN ++D L +G++ L+ M+ G I+YN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T+++ L K R++ F +M GI + +T+ LID + I+++ L N M +
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISE 525
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++P+ Y S++ + K G + A I E M ++
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I LC + A+ L + + K + P+ Y N ++ A + D L+ ++ +++
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVS-PDVYTFNILINALCKVGDPHLALRLFEEMK 418
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T Y + L ++++ P S I N II K +IE
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + + IT+N ++D L + +++D M G+ P+ I+YN++L
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSIL 538
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + M +G + D++TY LI+ + G + +L++ M+ + +R
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
P+ Y ++ +L + + A+++F EM +++ P D
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREM----AEVGEPPD 635
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + A +L + D+ LP+ +N ++ A N ++ + + + V+ + +
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGC-LPDITTFNTLIAALCTGNRLEEALDLARQ--VTVKGV 387
Query: 67 SSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S D YT A D L EE+ + N +I ++ KAL
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ ++ C ITYN ++D L + R+ + F M G+ + I++NTL++ L
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K +++D +M G++P+ +TY +++ + + G+I+++ + M +
Sbjct: 508 KDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L K G+ +A+ + M
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGM 592
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G+ A+RL + +++ P+ YN ++ + + +LKD+ +
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIF-IEEVVQIASPESI----IVVNRIIFAFAKSRQ 118
S+ Y I+ C ++ I EEV + I I N +I K ++
Sbjct: 457 CPRSTITYNT-----IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ A + + + +P+ ITYN +L + G + + +M G D ++Y T
Sbjct: 512 IDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K R + L R M G++P Y ++ S R NI ++L LF +M +
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 239 IRPSIYVYRSLIDNLKKMG 257
P Y+ + L + G
Sbjct: 632 EPPDALTYKIVFRGLCRGG 650
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ A ++ Q+ A+L+ + + PD T+ ++ G + L A
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G ++ N L+N K+ R++ L Y ++ G +PD +TY ++ +
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +L++ + M Q+ P ++ Y +++ L K G+++ A I +M
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 39 VLVASAETNDIDLSFQILKDLLVSSR-TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQI 97
+L A E D D + ++L L + Y R + + + E+ +
Sbjct: 44 LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKAL-LIFDHIKGL-KCKPDLITYNIVLDILGRVGRVN 155
+ VV+ + ++ + + A+ LI + ++ L + D + YN +L++L ++
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ + ++ M G+ PD +++NTL+ L + ++ ++ EM G+ PD T+T L+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
F G+IE +LR+ M + + LI+ K+G+V+ A+ ++
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I+ N +I F +R++ +A+ FD ++G KC P++ITY+I++D L +V R+ +
Sbjct: 348 TIVTYNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTL 406
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK G P ++Y L+N K L L++F +M +G P+ + + LID +
Sbjct: 407 EDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKA 466
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LRL M + +P + Y LI L +V+ A +F+ M
Sbjct: 467 ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM 514
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 140/271 (51%), Gaps = 11/271 (4%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC+ G +S+A++L + ++ FLP + +N +L + + L+D+ SS ++
Sbjct: 77 LCEIGQMSSALKLFREMQ-AGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSV 135
Query: 67 SSDCYTNFARAFIMTDDCT----QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
++ Y + + Q + F +E+ + + ++ A + S ++ +A
Sbjct: 136 ATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEA 195
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F + C PD++TYN+++D ++G+ + + + +AG P+ +Y+ ++N
Sbjct: 196 HALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINC 252
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K+ +++ F +M ES P+ +T+ LI F + G +E++++LF +M++ + +
Sbjct: 253 YCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKAT 312
Query: 243 IYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
I Y +LID+L KK G V A+ +F ++ +
Sbjct: 313 IVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 127/272 (46%), Gaps = 5/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G A L++ + K + PN Y+ ++ + + ++ ++++ ++
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEIL-KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ-I 119
S+ ++ + F + E+ +I +I+ N +I + K R +
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A+ +F+ ++G P ++TYN ++ R+++ + F M E P+ I+Y+ L
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSIL 389
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K+RR+ +M G P ++TY LI+ F + G ++ +L F MK
Sbjct: 390 IDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGC 449
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ ++ +LID L K + + + + M++
Sbjct: 450 APNTVIFNTLIDGLCKAERANDGLRLLCHMHA 481
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ +R+ ++AL +F + P+ TYN+++ + G+++ ++ F+ MK
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+G++P+ + NTLL L +I ++ L FREM P ++ L+ F G + +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNL----KKMGKVDLAMTIFEEMNSS 272
+L DM++ + Y ++ L K +++ AM F+EM +S
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKAS 170
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 43/222 (19%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
L +F E + + +P + N +I F K Q+ +A+ +F +K P+ T N +L
Sbjct: 17 LRLFKEVLAGLFAPNAH-TYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLL 75
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL----------------LNNLRK----- 185
L +G+++ L F M+ +P S+N L L ++RK
Sbjct: 76 GLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSV 135
Query: 186 ------------------IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
RL+ + +F+EM SG++PDL +Y L+ + +G + E+
Sbjct: 136 ATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEA 195
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LF+ M P I Y L+D K+G+ A ++ +E+
Sbjct: 196 HALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 7/190 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ C A +S A++ + K PN Y+ ++ + + + + L+D+
Sbjct: 353 NSLIQGFCDARRLSEAMQYFDEMEGKCA--PNVITYSILIDGLCKVRRMKEAAKTLEDMK 410
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y F + L+F E++ + ++ N +I K+ +
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
L + H+ CKPD+ITYN ++ L RV D F M A P+ ++N L+
Sbjct: 471 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA---PNVTTFNFLI 527
Query: 181 NNLRKIRRLD 190
L ++++
Sbjct: 528 RGLCAQKKVE 537
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P+ +YN L+ K ++ + F +M SG+ P+ T L+ G + +L+
Sbjct: 29 APNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALK 88
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
LF +M+ P+ + L+ G+V A+ ++M S S +A
Sbjct: 89 LFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVA 136
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 15/278 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC+A V AV +L+ + + + P+ + ++ E I+ + L
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGV-APDETTFTTLMQGFVEEGSIEAA------LR 237
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFA 114
V +R L C ++ + +L L +I++ + I N +
Sbjct: 238 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 297
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ + AL + D + PD+ TYNIV++ L + G++ + M + G +PD
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++NTL+ L RL+ L R++ G+ PD+ T+ LI++ + G+ +LRLF +M
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
K P Y +LIDNL +GK+ A+ + ++M S+
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D L ++ +VQ + N ++ K+ Q+E+A I + +
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C PD+ T+N ++ L R+ + L+ + GV PD ++N L+N L K+
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L L F EM SG PD +TY LID+ G + ++L L DM+ S Y ++I
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
D L K +++ A +F++M+
Sbjct: 469 DGLCKKMRIEEAEEVFDQMD 488
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 10/283 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+ NGY CK G V A+ +Q + F P+ YN + + + + + +++
Sbjct: 257 LINGY----CKLGRVEDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ Y + + ++V I N +I A +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+AL + + PD+ T+NI+++ L +VG + L F MK +G PD ++YNT
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++NL + +L L ++M +G +TY +ID + IEE+ +F+ M Q
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
I + + +LID L K K+D A FE +N +S+ P +
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDA---FELINQMISEGLQPNN 531
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 9/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLL----QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N ++ LC+ +V A++++ Q D ++F YN V+ + ++ + IL
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLEEAKGILNQ 346
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV-VQIASPESIIVVNRIIFAFAKSR 117
++ + A + + L +V V+ SP+ + N +I A K
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD-VYTFNILINALCKVG 405
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
AL +F+ +K C PD +TYN ++D L +G++ L+ M+ G I+YN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T+++ L K R++ F +M GI + +T+ LID + I+++ L N M +
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++P+ Y S++ + K G + A I E M ++
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I LC + A+ L + + K + P+ Y N ++ A + D L+ ++ +++
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVS-PDVYTFNILINALCKVGDPHLALRLFEEMK 418
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T Y + L ++++ P S I N II K +IE
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + + IT+N ++D L + +++D M G+ P+ I+YN++L
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + M +G + D++TY LI+ + G + +L++ M+ + +R
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
P+ Y ++ +L + + A+++F EM +++ P D
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREM----AEVGEPPD 635
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + A +L + D+ LP+ +N ++ A N ++ + + + V+ + +
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGC-LPDITTFNTLIAALCTGNRLEEALDLARQ--VTVKGV 387
Query: 67 SSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S D YT A D L EE+ + N +I ++ KAL
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ ++ C ITYN ++D L + R+ + F M G+ + I++NTL++ L
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K +++D +M G++P+ +TY +++ + + G+I+++ + M +
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L K G+ +A+ + M
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGM 592
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G+ A+RL + +++ P+ YN ++ + + +LKD+ +
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIF-IEEVVQIASPESI----IVVNRIIFAFAKSRQ 118
S+ Y I+ C ++ I EEV + I I N +I K ++
Sbjct: 457 CPRSTITYNT-----IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ A + + + +P+ ITYN +L + G + + +M G D ++Y T
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K R + L R M G++P Y ++ S R NI ++L LF +M +
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 239 IRPSIYVYRSLIDNLKKMG 257
P Y+ + L + G
Sbjct: 632 EPPDALTYKIVFRGLCRGG 650
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ A ++ Q+ A+L+ + + PD T+ ++ G + L A
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G ++ N L+N K+ R++ L Y ++ G +PD +TY ++ +
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +L++ + M Q+ P ++ Y +++ L K G+++ A I +M
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 39 VLVASAETNDIDLSFQILKDLLVSSR-TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQI 97
+L A E D D + ++L L + Y R + + + E+ +
Sbjct: 44 LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKAL-LIFDHIKGL-KCKPDLITYNIVLDILGRVGRVN 155
+ VV+ + ++ + + A+ LI + ++ L + D + YN +L++L ++
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ + ++ M G+ PD +++NTL+ L + ++ ++ EM G+ PD T+T L+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
F G+IE +LR+ M + + LI+ K+G+V+ A+ ++
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 3/272 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
I C G + A + K F PN C + S+ ID + +L+ ++
Sbjct: 459 IAGWCDQGRLDKAFSAYFEMIGKG-FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFD 517
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L C +F A I DC ++ ++E S + +V N + KS ++ A
Sbjct: 518 LVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDAR 577
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F + PD TY ++ G VN+ N M G+VP+ +YN LLN L
Sbjct: 578 RFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGL 637
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K LD F ++ G+ P+++TY LID + ++G+ E+L L M ++ I PSI
Sbjct: 638 CKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSI 697
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
Y SLI+ K V+ AM + EM +S D
Sbjct: 698 ITYSSLINGFCKQSDVEEAMKLLNEMKASNVD 729
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 91/178 (51%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E++++ ++ V N +I + K+ Q+ + + ++ L KPD +Y ++D R
Sbjct: 196 DEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRD 255
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G + N M G+ P ++YNTLL L + L + M + G+ P+ + Y
Sbjct: 256 GLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGY 315
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+D + G+ +L L++D+ + I SIY + ++I+ L KMG++D A F+ M
Sbjct: 316 CTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRM 373
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G S A + + K I P YN +L D + ++ +L
Sbjct: 249 VDGYCRDGLSSKAFNVCDQMLRKGI-EPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRG 307
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + Y D ++ L ++++ +SI N +I K +++ A
Sbjct: 308 VTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAK 367
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F ++ L CKPD ITY + D +VG V + M++ + P YN+L+ L
Sbjct: 368 ETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGL 427
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+++ + EM G+ P+++TY ALI + G ++++ + +M + P++
Sbjct: 428 FTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNV 487
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ +L ++G++D A + ++M
Sbjct: 488 IICSKIVSSLYRLGRIDEANMLLQKM 513
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 36/272 (13%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVASAETNDIDLSFQILKDL 59
+CN I CK G V RLL +R ++ P++Y+ C LV +D
Sbjct: 209 VCNSLINGYCKNGQVHEGERLLMCMRKLDL-KPDSYSYCTLVDG-----------YCRDG 256
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
L S +AF + D ++++ +++ N ++ +
Sbjct: 257 LSS-------------KAFNVCD----------QMLRKGIEPTVVTYNTLLKGLCRFGDY 293
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ AL ++ + P+ + Y +LD L ++G + L + + G+ ++NT+
Sbjct: 294 KDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTM 353
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L K+ +D F+ M E G KPD +TY L D + + GN+EE+ ++ M++++I
Sbjct: 354 INGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEI 413
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
PSI +Y SLI L K+ + + EM++
Sbjct: 414 FPSIEMYNSLIVGLFTSKKISKLIDLLAEMDT 445
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 10/233 (4%)
Query: 32 LPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLI 89
LPN YN + ++ ++ + + L S T + Y F +
Sbjct: 554 LPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFN 613
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD--HIKGLKCKPDLITYNIVLDI 147
+E+V +I N ++ KS +++A +FD H+KGL P+++TYNI++D
Sbjct: 614 LRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLI--PNVVTYNILIDG 671
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ G + L+ M + G+ P I+Y++L+N K ++ + EM S +
Sbjct: 672 YCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQT 731
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL----IDNLKKM 256
+ T++ L++ + G++++ +L N M I ++ + + N K+M
Sbjct: 732 IATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHKQMELSELSNAKEM 784
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ +A+ ++ AL +FD++ KP L + N +L L + G + + M+
Sbjct: 2 ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+VPD + ++N K +++ + + REM + G + + ++Y +L+D + G+IE +
Sbjct: 62 IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M ++ + + LI K KV+ A + EM
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREM 162
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/270 (17%), Positives = 113/270 (41%), Gaps = 37/270 (13%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDL 59
CN + L K G +AV + +R +I +P+ + C ++ +A + ++ + + ++++
Sbjct: 34 CNSLLSNLVKRGESYSAVLVYDQMRRLDI-VPDVFTCAIMVNAYCKAGKVERAVEFVREM 92
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
L++ Y + ++ D ++ + + + + + +I + K ++
Sbjct: 93 EKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKV 152
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A + ++ KE GVV D +Y L
Sbjct: 153 EEAEKVLREME----------------------------------KEDGVVVDEYAYGAL 178
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K+ ++ + EM + G+K +L +LI+ + + G + E RL M++ +
Sbjct: 179 IDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDL 238
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P Y Y +L+D + G A + ++M
Sbjct: 239 KPDSYSYCTLVDGYCRDGLSSKAFNVCDQM 268
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 64/128 (50%)
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
++L + G V + L+ F +M + G P S N+LL+NL K ++ + +M
Sbjct: 1 MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
I PD+ T +++++ + G +E ++ +M++ + Y SL+D +G ++ A
Sbjct: 61 DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120
Query: 263 MTIFEEMN 270
+ + M+
Sbjct: 121 KGVLKFMS 128
>gi|449445529|ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
gi|449523383|ref|XP_004168703.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
Length = 803
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 37/290 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ ++G AA+ +L + D L N YN VLVA N + L+ I LL
Sbjct: 132 LDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLL---- 187
Query: 65 TLSSDCYTN------FARAFIMTDD---CTQLLIFI-------------EEVVQIASPE- 101
D + N A F + C +LL+ + +++ I S E
Sbjct: 188 ----DGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEF 243
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIK-----GLKCKPDLITYNIVLDILGRVGRVND 156
S+ N I+AF ++ AL +F +K PDL TYN ++ +L VG+V D
Sbjct: 244 SVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKD 303
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
L + +K +G PD +Y ++ K R+D + F EM +G+ PD + Y +L++
Sbjct: 304 ALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLN 363
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ + E+ +LF+ M Q+ +R S + Y LID L + G+ + T+F
Sbjct: 364 GLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLF 413
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ +F K +A IF+ + C D+ TYN+++ LG++GR + + + E
Sbjct: 637 NSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLME 696
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G D + YNTL+N L K R+D F +M SGI PD++T+ LI+ + G +++
Sbjct: 697 QGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKD 756
Query: 227 SLRLFNDMKQQQIRPS 242
+ + M P+
Sbjct: 757 AYKFLKMMLDSGCSPN 772
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I +VN + F ++ A +F+ + P TYN +L + G + F
Sbjct: 598 INMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFN 657
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E D +YN ++ L K+ R DL ++ E G D++ Y LI++ G+ G
Sbjct: 658 EMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAG 717
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ +LF M+ I P + + +LI+ K G++ A + M
Sbjct: 718 RMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMM 764
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
DD T +IF E P++I V N ++ K+R++ +A +FD + + TY
Sbjct: 337 DDAT--MIFNEMEYNGLIPDTI-VYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTY 393
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
NI++D L R GR F +K+ G + D ++Y+ ++ L K R L+ L EM
Sbjct: 394 NILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEA 453
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
G DL+T T+L+ + + G + RL +++ + P++ ++
Sbjct: 454 RGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWK 499
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN----------DMLNEF 161
AF +S + + AL I DH++ L +L TYN VL L R +V D N
Sbjct: 134 AFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNG 193
Query: 162 ASMKEAGV----VPDFISYNTLLNNLRKI-RRLDLCLIYFREMGESGIKPDLLTYTALID 216
+ A +P+ ++ N LL LRK+ R++ ++ + + + Y I
Sbjct: 194 GQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIY 253
Query: 217 SFGRTGNIEESLRLFNDMKQQQI-----RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+FG G ++ +L LF +MK++ + P + Y S+I L +GKV A+ ++EE+
Sbjct: 254 AFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKG 313
Query: 272 S 272
S
Sbjct: 314 S 314
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 53 FQILKDLLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
F+ +K+ + S + S D Y + + LI EE+ II
Sbjct: 268 FKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIII 327
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
KS +++ A +IF+ ++ PD I YN +L+ L + +V + F M + V
Sbjct: 328 QGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVR 387
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+YN L++ L + R + F ++ + G D +TY+ +I + +EE+L+L
Sbjct: 388 ASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQL 447
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+M+ + + SL+ + K G+ D
Sbjct: 448 VEEMEARGFVVDLITITSLLIAMHKQGQWD 477
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 48/89 (53%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E++++ I++ N +I A K+ +++ +F ++ PD++T+N ++++ +
Sbjct: 691 LEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSK 750
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTL 179
GR+ D M ++G P+ ++ TL
Sbjct: 751 AGRLKDAYKFLKMMLDSGCSPNHVTDTTL 779
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TY+ + IL R G ++++ SMK GV D ++ LL+ + + D L M
Sbjct: 92 TYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHM 151
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ G +L TY +++ + +++ Q+ ++ ++ L+D G+V
Sbjct: 152 EDLGTSLELNTYNSVLVAL---------------LRKNQVGLALSIFFKLLDGFNNGGQV 196
Query: 260 DLAMTIFEEMNSSLS 274
D A T F + +SL+
Sbjct: 197 DSAATTFHFLPNSLA 211
>gi|341605731|gb|AEK82968.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605733|gb|AEK82969.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605735|gb|AEK82970.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRXNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 89/201 (44%), Gaps = 2/201 (0%)
Query: 19 VRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARA 77
V L Q + +K I +P + ++ V+ + ++ + + ++++ + YT
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
+ + + + ++ ++ + ++ K+ ++E+AL F + +
Sbjct: 62 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAIN 121
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+ Y+ ++D LG+ GR+++ F M E G D YN L++ L K ++D + F+
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181
Query: 198 EM-GESGIKPDLLTYTALIDS 217
M E G + TYT LI
Sbjct: 182 RMEEEEGCDQTVYTYTILISG 202
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 91/170 (53%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S N +I K + +++A + D PD++TY+I+ D L + GR+++
Sbjct: 79 SCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELV 138
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M G P+ ++YNTL++ L K + + + SG PD++TYT ++D +
Sbjct: 139 KEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKE 198
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G ++++L++ M ++ PS+ Y +L++ L + G+VD A IF+EM S
Sbjct: 199 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 125/269 (46%), Gaps = 6/269 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCKAG A LL + ++N P+ YN ++ + ++D + ++ + +
Sbjct: 49 NSIMDGLCKAGKFERAHSLLAVMAERNC-RPSCCTYNTLISGLCKQQNVDRAKTLVDEFV 107
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y+ A + ++E+ +++ N +I K+ + E
Sbjct: 108 SSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTE 167
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA + + + PD++TY I++D L + GR++ L M + G P I+Y L+
Sbjct: 168 KAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 227
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + R+D F+EM D L Y +L++ + ++ +E+ ++ + ++
Sbjct: 228 EGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--- 284
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P I VY +L+D K G++D +FE+M
Sbjct: 285 PYIDVYNALMDGYCKEGRLDEIPNVFEDM 313
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 6/269 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCKA A LL++L F+P+ Y ++ + +D + ++++ +L
Sbjct: 154 NTLIDGLCKASKTEKAYELLETLVSSG-FVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 212
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T S YT T + +E+V + ++ + KS + +
Sbjct: 213 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTK 272
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D I+G P + YN ++D + GR++++ N F M G VP+ +YN ++
Sbjct: 273 EAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 329
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++D + M +G PD+++Y +ID + +E+ ++ + M Q I
Sbjct: 330 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 389
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +L+ K + D A+ I + M
Sbjct: 390 PDAVTYNTLMAQFCKEERFDDAVGILKNM 418
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
TD +++L E+V + N I+ K+ + E+A + + C+P T
Sbjct: 26 TDKASEML---HEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 82
Query: 141 YNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
YN ++ L + V R +++EF S +G VPD ++Y+ L + L K R+D +
Sbjct: 83 YNTLISGLCKQQNVDRAKTLVDEFVS---SGFVPDVVTYSILADGLCKRGRIDEAFELVK 139
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM +G P+L+TY LID + E++ L + P + Y ++D L K G
Sbjct: 140 EMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEG 199
Query: 258 KVDLAMTIFEEM 269
++D A+ + E M
Sbjct: 200 RLDKALKMVEGM 211
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N +I K+ + +KA + + PD +T+N ++D L + G+ + A
Sbjct: 10 VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 69
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E P +YNTL++ L K + +D E SG PD++TY+ L D + G
Sbjct: 70 VMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRG 129
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+E+ L +M P++ Y +LID L K K + A + E + SS
Sbjct: 130 RIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 7/270 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
NGY CK+ A +++ +R + YN ++ + +D + +D+
Sbjct: 263 NGY----CKSSRTKEAQKVVDGIRGTPYI--DVYNALMDGYCKEGRLDEIPNVFEDMACR 316
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ Y + F+E + ++ N II K+ + ++A
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 376
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ D + PD +TYN ++ + R +D + +M +AGV PD ++YNTL++
Sbjct: 377 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 436
Query: 183 LRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + RL EM +G + TY +ID + G ++++L L + M +
Sbjct: 437 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 496
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ID L K G++D A ++ EM++
Sbjct: 497 NTVTYNIFIDRLCKEGRLDEASSLLSEMDT 526
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
K PD+ TYNI++D L + + + M + GV PD +++N++++ L K + +
Sbjct: 5 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
M E +P TY LI + N++ + L ++ P + Y L D
Sbjct: 65 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
L K G++D A + +EM+ +
Sbjct: 125 LCKRGRIDEAFELVKEMSGN 144
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E V PD +YN L++ L K + D EM + G+ PD +T+ +++D + G
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E + L M ++ RPS Y +LI L K VD A T+ +E SS
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS 109
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 126/310 (40%), Gaps = 35/310 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + + CK AV +L+++ + N YN ++ ++TN + +++++ ++L
Sbjct: 396 NTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLR 455
Query: 62 SSRTLSSDCYTNFARAFIMTDDC-TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +S+ N + + C Q L+ ++ + + + N I K +++
Sbjct: 456 NGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLD 515
Query: 121 KALLIFDHIKGLK------------CKPDLI---------------------TYNIVLDI 147
+A + + L+ CK + + T+N+++D
Sbjct: 516 EASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 575
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ R+++ L M + G P I+YN ++ L K+ ++D F EM GI
Sbjct: 576 FTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVAS 635
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++YT LI G +E+L++ +M R L L+ G+ + A +
Sbjct: 636 SVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLR 695
Query: 268 EMNSSLSDLA 277
M + + L+
Sbjct: 696 RMTTKMDSLS 705
>gi|15221081|ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11710, mitochondrial; Flags: Precursor
gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14 [Arabidopsis thaliana]
gi|22655109|gb|AAM98145.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis thaliana]
gi|332190652|gb|AEE28773.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 139/270 (51%), Gaps = 11/270 (4%)
Query: 7 EKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
EKL +S +R Q+ P+ ++ ++ A + D ++++++ +
Sbjct: 126 EKLSPLHVLSGLIRSYQACGSS----PDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCV 181
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S NF + ++ + +E+ + E++ N +I++F K ++ +AL +F
Sbjct: 182 SVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVF 241
Query: 127 DHIKGLKCK--PDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGVVPDFISYNTLLN 181
+ LKC P+++++N+++D + G + +L + M V P+ ++YN+++N
Sbjct: 242 --YRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVIN 299
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K RLDL +M +SG+ + TY AL+D++GR G+ +E+LRL ++M + +
Sbjct: 300 GFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVV 359
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +Y S++ L G ++ AM++ +MNS
Sbjct: 360 NTVIYNSIVYWLFMEGDIEGAMSVLRDMNS 389
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 120/271 (44%), Gaps = 4/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLL--QSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
N I+ CK G++ A++LL + N PNA YN V+ + +DL+ +I D
Sbjct: 257 NMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGD 316
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ S + Y A+ + L +E+ + ++ N I++
Sbjct: 317 MVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGD 376
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
IE A+ + + + D T IV+ L R G V + + + E +V D + +NT
Sbjct: 377 IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNT 436
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+++ + ++L M G+ D +++ LID + + G +E +L +++ M +
Sbjct: 437 LMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMN 496
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +Y S+++ L K G A + M
Sbjct: 497 KTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM 527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 113/249 (45%), Gaps = 9/249 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ LC+ G V AV + + +K + +N ++ + + QIL +LV
Sbjct: 403 VRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGL 462
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+L + + ++ + L + ++++ ++++ N I+ +K A
Sbjct: 463 SLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEA 522
Query: 125 IFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ + ++ K D++TYN +L+ G V +D+L++ V +++N ++N
Sbjct: 523 V---VNAMEIK-DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVS-LVTFNIMIN 577
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L K + + M E G+ PD +TY LI SF + + E+ + L + + Q + P
Sbjct: 578 HLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
Query: 242 SIYVYRSLI 250
++Y S++
Sbjct: 638 HEHIYLSIV 646
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
V ++ + M G V + ++N ++ + K +L L F M + G+ P++++
Sbjct: 196 VNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVS 255
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQ---IRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ +ID +TG++ +L+L M + P+ Y S+I+ K G++DLA I
Sbjct: 256 FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG 315
Query: 268 EMNSSLSD 275
+M S D
Sbjct: 316 DMVKSGVD 323
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 46/103 (44%)
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N + L + +D ++EM G ++ T+ +I SF + + E+L +F M +
Sbjct: 187 NNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLK 246
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
+ P++ + +ID K G + A+ + +M + P
Sbjct: 247 CGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSP 289
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 102/180 (56%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F E+++ + +N +I AFAK+ ++AL +FD + P +IT+N ++D G
Sbjct: 151 FFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACG 210
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R G ++ F+ + +AG+ P+ +++ L+++ ++D + +EM G++P+ +
Sbjct: 211 RAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRV 270
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ALI++ GR G + + + ++M I P++ + +LID K +++ + +F+EM
Sbjct: 271 TYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEM 330
Score = 90.5 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 78/131 (59%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+ L LG GR++D + + +M + P ++++TL++ RR+ L +FREM E
Sbjct: 98 NVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMLE 157
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
+GI PD+ +LI++F + G+ +++L++F+ M + + PS+ + +LID + G +D
Sbjct: 158 AGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDR 217
Query: 262 AMTIFEEMNSS 272
A +F ++ +
Sbjct: 218 ARQVFSRLSQA 228
Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 86/165 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N + A + +I+ + ++ + + +P ++T++ ++ G RV F M E
Sbjct: 98 NVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMLE 157
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
AG+ PD + N+L+N K D L F +M G+ P ++T+ LID+ GR G+I+
Sbjct: 158 AGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDR 217
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ ++F+ + Q + P+ + +LI + G+VD A + +EM +
Sbjct: 218 ARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRA 262
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 82/162 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + A Q+++A ++ +P+ +TY+ +++ GR G++ M G
Sbjct: 240 LIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGTG 299
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P+ +++ TL++ K + L+ F+EM E G P+ +T +AL+D+ + ++ +
Sbjct: 300 IEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLAF 359
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ M I P+ Y SL+ ++G+ D A + +E+N
Sbjct: 360 AVLEHMLDVGIEPTEVTYTSLLTQCARLGQADRAGIVLDELN 401
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 111/242 (45%), Gaps = 5/242 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I KAG+ A+++ + + P+ +N ++ A DID + Q+ L
Sbjct: 168 NSLINAFAKAGSPDQALKVFDQMSRYGV-TPSVITFNTLIDACGRAGDIDRARQVFSRLS 226
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + ++ + + + +++E+ + + + +I A ++ Q+
Sbjct: 227 QAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLA 286
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A D + G +P+++T+ ++D G+ + F M+E G VP+ ++ + L+
Sbjct: 287 RAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSALM 346
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K LDL M + GI+P +TYT+L+ R G + + + +++ ++ R
Sbjct: 347 DACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLGQADRAGIVLDELNKR--R 404
Query: 241 PS 242
P+
Sbjct: 405 PN 406
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM-- 199
N LD L RV V F M+ GV PD +YN L+N + D L R M
Sbjct: 869 NPALDNLFRVFLV------FQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVD 922
Query: 200 -GE-SGIKPDLLTYTALIDSFGRT--GNIEESLRLFNDMKQQQ------IRPSIYVYRSL 249
GE G++PD +TYT+LI + R +EE+ +F M+Q+ RP+ Y L
Sbjct: 923 DGEGGGLQPDAVTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHL 982
Query: 250 I 250
+
Sbjct: 983 M 983
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM--LNEFASMKEAGVV 170
F ++ Q++ A + + + + PD T+ ++L+ + G ++ L E + + G
Sbjct: 552 FGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSE 611
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+ ++Y+ LL + ++L + M E+G+KP TY AL++ + + + ++ +
Sbjct: 612 INELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVCRHSRDSKAAVEV 671
Query: 231 FNDMKQQQIRPSIYVYRSLI 250
F M+ + +RP + Y SL+
Sbjct: 672 FEAMETEGVRPGVRSYTSLL 691
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL-IYFREMGES 202
+L + G+ +V+ M E PD ++ LLN + LD + + R E
Sbjct: 548 LLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAEG 607
Query: 203 -GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G + + LTY+AL+ + GR + + R+ M++ ++P+ Y +L++ +
Sbjct: 608 HGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALMEVCRHSRDSKA 667
Query: 262 AMTIFEEMNS 271
A+ +FE M +
Sbjct: 668 AVEVFEAMET 677
Score = 42.0 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 14/171 (8%)
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIA-SPES---IIVVNRIIFAFAKSRQ 118
+R L SD F +A D +E +V+ SP+ ++++N + A A +
Sbjct: 541 NRKLESDLLQLFGQA----DQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKA 596
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E L+ +G + + +TY+ +L GR ++ SM+E GV P +Y
Sbjct: 597 VE--LMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLA 654
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
L+ R R + F M G++P + +YT+L+ + E +LR
Sbjct: 655 LMEVCRHSRDSKAAVEVFEAMETEGVRPGVRSYTSLLKAISE----ENTLR 701
>gi|449446161|ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 1/173 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ I+ N ++F+ K ++++ + D + PD TYNI+L +LG+ + L
Sbjct: 253 SPD-ILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAAL 311
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
N M+E G P+ + + TL+N L + LD C +F E+G +G PD++ YT +I SF
Sbjct: 312 NLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSF 371
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G E++ F++M + P+++ Y S+I +GK A ++ EM S
Sbjct: 372 TEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMES 424
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++YN LL + K+ +LD EM G PD TY L+ G+ +L L
Sbjct: 254 PDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNL 313
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
N M++ P++ + +LI+ L + G +D F+E+ ++
Sbjct: 314 LNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNN 355
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 3/203 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
CK G + RLL + K F P + YN +L + + + +L + +
Sbjct: 267 CKLGKLDQFHRLLDEMARKG-FSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPN 325
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+T + F +E+ ++ +I +F ++ Q EKA FD
Sbjct: 326 VLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFD 385
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ P++ TYN ++ VG+ + + + M+ G P+F+ Y+TL++ LR
Sbjct: 386 EMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAG 445
Query: 188 RLDLCLIYFREMGESGIKPDLLT 210
+L ++M E+G L+T
Sbjct: 446 KLGEAHKVIKQMVENGQYAHLMT 468
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
FA+ + + + D + T+ I++ G G ++ F K P
Sbjct: 161 FAECEEFKAMWRVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPY 220
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
SYN +L+ L +++ L + +M PD+LTY L+ S + G +++ RL +
Sbjct: 221 KHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLD 280
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+M ++ P + Y L+ L K K A+ + M
Sbjct: 281 EMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHM 317
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 5/258 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+V+ A L + + + I P+ YN V+ A + +D + L+ +
Sbjct: 189 NTVIDGFFKEGDVNKACDLFKEMVQRGI-PPDLVTYNSVVHALCKARAMDKAEAFLRQM- 246
Query: 61 VSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V+ R L ++ Y N + T + + +E+ + + ++ ++ ++ + K +I
Sbjct: 247 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 306
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +FD + PD+ +YNI+L+ G + DM + F M G+ PDF ++N
Sbjct: 307 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQ 366
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ LD +I F EM + G+KPD++TY +I + R G +++++ FN M Q +
Sbjct: 367 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 426
Query: 240 RPSIYVYRSLIDNLKKMG 257
P Y Y LI G
Sbjct: 427 APDKYAYNCLIQGFCTHG 444
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 137/270 (50%), Gaps = 9/270 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKN-IFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
++ LC G A LL+ + + + P+ AYN V+ + D++ + + K+++
Sbjct: 155 LKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV-- 212
Query: 63 SRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R + D Y + A + F+ ++V + N +I+ ++ + Q +
Sbjct: 213 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 272
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F ++ PD++T ++++ L + G++ + + F +M G PD SYN +L
Sbjct: 273 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 332
Query: 181 NNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
N K +D+ ++ +G+ GI PD T+ I ++ G +++++ +FN+M+ +
Sbjct: 333 NGYATKGCLVDMTDLFDLMLGD-GIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGV 391
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P + YR++I L ++GK+D AM F +M
Sbjct: 392 KPDVVTYRTVIAALCRIGKMDDAMEKFNQM 421
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 4/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+A A+ +L + +P+ +YN +L + + +L+ +
Sbjct: 119 LKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGG 178
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S D Y F D + +E+VQ P ++ N ++ A K+R ++K
Sbjct: 179 TVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDK 238
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + P+ TYN ++ G+ + + F M+ ++PD ++ + L+
Sbjct: 239 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 298
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L K ++ F M G PD+ +Y +++ + G + + LF+ M I P
Sbjct: 299 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 358
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y + I G +D AM IF EM
Sbjct: 359 DFYTFNVQIKAYANCGMLDKAMIIFNEM 386
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 2/258 (0%)
Query: 21 LLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSSRTLSSDCYTNFARAF 78
Q + + F N Y C + ND ++++ KD LV+ Y R F
Sbjct: 3 FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGF 62
Query: 79 IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDL 138
+ Q + + E+ +I+ +I + +KAL IF + +K KPD
Sbjct: 63 CKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDA 122
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
Y +V+ L ++ +++ + F M ++G +PD ++Y L+++L K + + F E
Sbjct: 123 FLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M G P+L+TY +++ + + G I+++L L +K PS +Y +LID L K +
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242
Query: 259 VDLAMTIFEEMNSSLSDL 276
D A +FE + D+
Sbjct: 243 HDEARELFEMAAGDVQDV 260
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 4/177 (2%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
+ V ++ KSR++E+A +I + + G + P ++TY+ V+D L + R++D
Sbjct: 329 GVPVCTVLVDGLCKSRRVEEACVILERMLETGDR-APSVVTYSAVIDGLCKADRLDDAYV 387
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
M+ AG VPD ++Y +++ K+ RLD F+ M E G D++ Y LI +
Sbjct: 388 VLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYC 447
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN-SSLSD 275
R ++E++ + +M + I+P++ +++D L K +V+ A + E+MN SL D
Sbjct: 448 RAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESLPD 504
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 46/274 (16%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
Y V+ + ID + +++ L + R+ S Y+ D + E+
Sbjct: 195 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDE----ARELF 250
Query: 96 QIASP--ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK--CKPDLITYNIVLDILGRV 151
++A+ + +IV I K+ ++++A + H+K ++ C PD ++YN+++ L +
Sbjct: 251 EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAV--HVKMIEAGCAPDPVSYNVIIYSLCKD 308
Query: 152 GRVN-------------------------DMLNEFASMKEAGVV-----------PDFIS 175
RV+ D L + ++EA V+ P ++
Sbjct: 309 NRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVT 368
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y+ +++ L K RLD + ++M +G PD++TYTA+ID+F + G ++E+ LF M
Sbjct: 369 YSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMH 428
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + Y LI + KVD A+ + EEM
Sbjct: 429 ERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEM 462
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 110/235 (46%), Gaps = 8/235 (3%)
Query: 5 YIEKLCKAGNVSAA----VRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+I LCKAG + A V+++++ + P +YN ++ + + N + + +++ +
Sbjct: 266 FISGLCKAGKLDEAKAVHVKMIEAGCAPD---PVSYNVIIYSLCKDNRVSEAKELMDQAM 322
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS-PESIIVVNRIIFAFAKSRQI 119
T + + + +E +++ S++ + +I K+ ++
Sbjct: 323 ERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRL 382
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A ++ ++ C PD++TY ++D +VGR+++ F M E G D ++YN L
Sbjct: 383 DDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNIL 442
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ + ++D + EM GI+P++++ + ++D + +EE+ L M
Sbjct: 443 IRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 5/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I KLC+ A+++ + D + P+A Y V+ + N +DL+ + ++ S
Sbjct: 94 IRKLCELNFTDKALQIFHQMIDMKV-KPDAFLYTVVIGHLCKINKLDLAASYFERMVQSG 152
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT + Q EE++ ++ ++ + K+ +I++AL
Sbjct: 153 CLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQAL 212
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ +KG P Y+ ++D L + R +D E M AG V D I Y + ++ L
Sbjct: 213 SLMRRLKGTGRSPSGSLYSTLIDGLCKHDR-HDEARELFEMA-AGDVQDVIVYTSFISGL 270
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +LD +M E+G PD ++Y +I S + + E+ L + +++ P +
Sbjct: 271 CKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGV 330
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
V L+D L K +V+ A I E M
Sbjct: 331 PVCTVLVDGLCKSRRVEEACVILERM 356
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 7/263 (2%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + A RLL + + P+ YN ++ ++ ++ + L L + R L D
Sbjct: 199 GRIEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGKMEEASTYL--LEIQGRGLKPDA 255
Query: 71 YT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
T F + T T+ + +E++ + + +I K+ + +AL IF H
Sbjct: 256 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 315
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ L PD+ T + + L + GRV + L F+ +KE G+VPD +Y++L++ K
Sbjct: 316 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 375
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ EM GI P++ Y AL+D ++G+I+ + +LF+ M ++ + P Y +
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 435
Query: 249 LIDNLKKMGKVDLAMTIFEEMNS 271
+ID K V A ++F EM S
Sbjct: 436 MIDGYCKSENVAEAFSLFHEMPS 458
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 120/249 (48%), Gaps = 14/249 (5%)
Query: 31 FLPNAYNCVLVASA-----ETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCT 85
+PN Y ++ + N+ L+F+ ++ + + + F+ D
Sbjct: 6 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK---TGLKPDYNACSALIDGFMREGDID 62
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
++L + +V P ++I N +I K ++EKA I + L CKP+ T+ +++
Sbjct: 63 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122
Query: 146 DILGR---VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+ R +GR ++L+E M++ +VP +SY ++N L + L L +M S
Sbjct: 123 EGYCREHNMGRALELLDE---MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G+KP+++ Y+ LI + G IEE+ RL + M + P I+ Y ++I L K GK++ A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239
Query: 263 MTIFEEMNS 271
T E+
Sbjct: 240 STYLLEIQG 248
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 8/270 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
NG+ KAGN+ A+ + + L + LP+ C + + + ++ +L
Sbjct: 298 NGHF----KAGNLMEALSIFRHLHALGV-LPDVQTCSAFIHGLLKNGRVQEALKVFSELK 352
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y++ F + + +E+ +I + N ++ KS I+
Sbjct: 353 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 412
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + +PD +TY+ ++D + V + + F M GV P YN L+
Sbjct: 413 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 472
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K ++ + FREM + G L ++ LID + ++ I+E+ +LF +M +QI
Sbjct: 473 HGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 531
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P Y ++ID K GK++ A +F+EM
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLL 60
N I LCK G + A +L+ + PN+ C+L+ +++ + ++L ++
Sbjct: 84 NVLIHGLCKFGKMEKAAEILKGMITLGC-KPNSRTFCLLIEGYCREHNMGRALELLDEME 142
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ S+ Y D + +E++ +++V + +I +A +IE
Sbjct: 143 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 202
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D + PD+ YN ++ L + G++ + ++ G+ PD +++ +
Sbjct: 203 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 262
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K ++ YF EM + G+ P+ YT LI+ + GN+ E+L +F + +
Sbjct: 263 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 322
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + + I L K G+V A+ +F E+
Sbjct: 323 PDVQTCSAFIHGLLKNGRVQEALKVFSEL 351
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 6/262 (2%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNCVLV-ASAETNDIDLSFQILKDLLVSSRTLSSD 69
K G ++ A + + D + N VL+ + ++ + I + L
Sbjct: 267 KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQ 326
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH- 128
+ F + + L E+ + + + +I F K ++EKA + D
Sbjct: 327 TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 386
Query: 129 -IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+KG+ P++ YN ++D L + G + F M E G+ PD ++Y+T+++ K
Sbjct: 387 CLKGIA--PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+ F EM G++P Y AL+ + G++E+++ LF +M Q+ ++ +
Sbjct: 445 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFN 503
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+LID K K+ A +F+EM
Sbjct: 504 TLIDGYCKSCKIQEASQLFQEM 525
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
C+ I+ + G++ +R+ + I + YN ++ + ++ + +ILK ++
Sbjct: 48 CSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI 107
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S + + + + L ++E+ + S + +I + +
Sbjct: 108 TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLS 167
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + + + KP+++ Y+ ++ GR+ + M +GV PD YN ++
Sbjct: 168 LANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 227
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K +++ Y E+ G+KPD +T+ A I + +TG + E+ + F++M +
Sbjct: 228 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 287
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ +Y LI+ K G + A++IF +++
Sbjct: 288 PNNPLYTVLINGHFKAGNLMEALSIFRHLHA 318
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 110/240 (45%), Gaps = 4/240 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C+ +I L K G V A+++ L++K + +P+ Y+ ++ + +++ +F++ ++
Sbjct: 328 CSAFIHGLLKNGRVQEALKVFSELKEKGL-VPDVFTYSSLISGFCKQGEVEKAFELHDEM 386
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y + D + + + + + + +I + KS +
Sbjct: 387 CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 446
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A +F + +P YN ++ + G + +N F M + G +S+NTL
Sbjct: 447 AEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTL 505
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K ++ F+EM I PD +TYT +ID + G +EE+ LF +M+++ +
Sbjct: 506 IDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 565
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 126/288 (43%), Gaps = 21/288 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK+G++ A +L + +K + P++ Y+ ++ ++ ++ +F + ++
Sbjct: 399 NALVDGLCKSGDIQRARKLFDGMPEKGL-EPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y D + + E++Q + + N +I + KS +I+
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQ 516
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-------------- 166
+A +F + + PD +TY V+D + G++ + F M+E
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEK 576
Query: 167 ---AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
GV PD ++Y ++ K L E+ G+ + LI + + +
Sbjct: 577 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 636
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ E+ +L ++M + ++PS+ +L+ + + GK+D A +FE + S
Sbjct: 637 LTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKS 684
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 84/164 (51%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I +++++ +A L F+ ++ KPD + ++D R G ++++L M G
Sbjct: 16 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 75
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ + I+YN L++ L K +++ + M G KP+ T+ LI+ + R N+ +L
Sbjct: 76 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 135
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L ++M+++ + PS Y ++I+ L + LA + E+M S
Sbjct: 136 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E G+VP+ +Y + L + +R++ + F EM ++G+KPD +ALID F R G+
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+E LR+ + M I ++ Y LI L K GK++ A I + M
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 106
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
MGE G+ P+ TYT + R + E+ F +M++ ++P +LID + G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 259 VDLAMTIFEEMNS 271
+D + I + M S
Sbjct: 61 IDEVLRIKDVMVS 73
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 122/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I L + G + A+ L + + + +PN YN ++ + +I +
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGL-VPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + + D + ++ E+++++ +++ N +I + + A
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D +K C+PD TYN ++ + G++ F M E G+ P+ +SY L++
Sbjct: 464 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH 523
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D+ L + M E G P++ +Y A+I+ + E+ ++ + M +Q + P++
Sbjct: 524 SKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNV 583
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LID L + G+ A IF +M
Sbjct: 584 ITYTTLIDGLCRNGRTQFAFKIFHDM 609
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I +LC G S A+++ + YN ++ DI+ + + + +L
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y ++ + ++ + + N ++ F+K ++E
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A F + P+ ++Y ++D + G+V+ L+ M+E G P+ SYN ++N
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVIN 556
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K R +M E G+ P+++TYT LID R G + + ++F+DM++++ P
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFE 267
++Y Y SLI L + GK D A + E
Sbjct: 617 NLYTYSSLIYGLCQEGKADEAERMSE 642
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ + ++ Q + +I ++R ++ A +FD + C P+ +TY+ +++ L
Sbjct: 219 LILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 278
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
GRV++ L+ M E G+ P +Y + L I + + M + G +P++
Sbjct: 279 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TYTALI R G +E ++ L++ M ++ + P+ Y +LI+ L G+ A+ IF
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398
Query: 269 MNSSLS 274
M S
Sbjct: 399 MEGHGS 404
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 126/304 (41%), Gaps = 38/304 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I L K G V A +L + ++ P+ Y +++ ++DL+F + ++
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQYDLS-PDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S Y+ + L +EE+++ ++ I A E
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + +K C+P++ TY ++ L R+G++ + + M + G+VP+ ++YN L+
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380
Query: 181 NNLRKIRRLD---------------------------LCL--------IYFREMGESGIK 205
N L R LCL + F +M + G
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P ++TY LI+ + GN+ + RL + MK+ P + Y L+ K GK++ A
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500
Query: 266 FEEM 269
F+EM
Sbjct: 501 FQEM 504
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+ E+ + S+ N ++ AK +E A ++ + +P L+T+N +++IL
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+V + + + + + PD +Y +L+ + R LDL F M + G P+ +
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY------------------------- 244
TY+ LI+ G ++E+L + +M ++ I P++Y
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329
Query: 245 ----------VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI L ++GK+++A+ ++ +M
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I+ + + ++A + + + C+P L TY+ ++ L R GR + MKE G
Sbjct: 624 LIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 679
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD Y +LL K +D L F + G + L Y ALI + + G +EE+
Sbjct: 680 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 739
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LF++M +++ V+ L+D L K G++DL M + M S
Sbjct: 740 ALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMES 782
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A +I + + I G+ L + N +L L + V N + M +G
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P +++NTL+N L K ++ + ++ + + PD+ TYT+LI R N++ +
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F+ M ++ P+ Y +LI+ L G+VD A+ + EEM
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A K+ +++ AL IF I+ + L Y ++ L + G+V + F +M E
Sbjct: 690 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 749
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D I + L++ L K LDLC+ M P++ TY L R G ES
Sbjct: 750 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESE 809
Query: 229 RLFNDMK 235
L + +K
Sbjct: 810 PLADKLK 816
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 97/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM E G+ P+ +
Sbjct: 189 RLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSV 248
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 249 TFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEM 308
Query: 270 N 270
+
Sbjct: 309 S 309
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 124/276 (44%), Gaps = 21/276 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ + P+ +YN ++ D+D F++ + S
Sbjct: 149 MHRFCKEGDIRVAQSVFDAITKWGL-RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASG 207
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD +L +E+++ + + +I K+
Sbjct: 208 --VHPDVYTYSVLINGLCKESKM-DDANKLF---DEMLEKGLVPNSVTFTTLIDGHCKNG 261
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFI 174
++ A+ I+ + PDL+TYN ++ L + G + +D+++E M G+ PD I
Sbjct: 262 WVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDE---MSMXGLKPDKI 318
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 319 TYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 379 LSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 38/249 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A +L + +K + +PN+ + ++ + +DL+ +I K +L S
Sbjct: 219 INGLCKESKMDDANKLFDEMLEKGL-VPNSVTFTTLIDGHCKNGWVDLAMEIYKQML--S 275
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++L D ++ N +I+ K +++A
Sbjct: 276 QSLLPD---------------------------------LVTYNALIYGLCKKGDLKQAH 302
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G ++ M + + D ++Y L++ L
Sbjct: 303 DLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGL 362
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KPD TYT +I+ F + G++ + +L +M++ PS+
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422
Query: 244 YVYRSLIDN 252
Y L++
Sbjct: 423 VTYNVLMNG 431
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A +FD + KGL P+ +T+ ++D + G V+ + + M
Sbjct: 218 LINGLCKESKMDDANKLFDEMLEKGLV--PNSVTFTTLIDGHCKNGWVDLAMEIYKQMLS 275
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
++PD ++YN L+ L K L EM G+KPD +TYT LID + G+++
Sbjct: 276 QSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDT 335
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M Q+ IR Y +LI L + G+ A + EM S
Sbjct: 336 AFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 67/138 (48%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ +G + D ++ + +E F + +L +L K++ L
Sbjct: 69 RSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M++S
Sbjct: 189 RLGDLDEGFRLKSAMHAS 206
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN I+ LCK + A +LQ + D++I +PN YN ++ + + +ILK++
Sbjct: 290 CNSVIDGLCKVQAMDKAEAVLQQMIDEHI-MPNCTTYNSLIHGYLSSGQWTEAVRILKEM 348
Query: 60 -----------------------------------LVSSRTLSSDCYTNFARAFIMTDDC 84
+ S + ++ Y + + +
Sbjct: 349 SRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNL 408
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
+ + +VQ V N I+A+ K ++++A L F+ ++ PD++ Y V
Sbjct: 409 VDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTV 468
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+D L ++GR++D ++ F M + G+ PD I++NTL++ + + F EM + GI
Sbjct: 469 IDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGI 528
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
P++ T+ ++ID + G + E+ +LF+ M + +P++ Y ++I G+V M
Sbjct: 529 PPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMK 588
Query: 265 IFEEM 269
+ ++M
Sbjct: 589 LLDDM 593
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C P++++Y V+ + G V F M + G+ P+ ++ N++++ L K++ +D
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 304
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++M + I P+ TY +LI + +G E++R+ +M + RP++ Y LI
Sbjct: 305 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLI 364
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
D L K G A IF M S
Sbjct: 365 DCLCKSGLHAEAREIFNSMIQS 386
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 116/256 (45%), Gaps = 7/256 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASA-ETNDIDLSFQILKDLLVS 62
I+ LCK+G + A + S+ PNA Y +L A E N +D++ +KDL+V
Sbjct: 364 IDCLCKSGLHAEAREIFNSMIQSGQ-KPNASTYGSLLHGYATEGNLVDMNN--VKDLMVQ 420
Query: 63 SRTLSSDCYTNFA-RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ N A+ + + ++ Q I+ +I K +++
Sbjct: 421 NGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDD 480
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ F + PD+IT+N ++ G+ F M + G+ P+ ++N++++
Sbjct: 481 AMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMID 540
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K ++ F M +G KP++++Y +I + G + E ++L +DM ++P
Sbjct: 541 KLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKP 600
Query: 242 SIYVYRSLIDNLKKMG 257
+ + +L+D + MG
Sbjct: 601 TAVTFNTLLDGMVSMG 616
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 20/155 (12%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ II N +I FA + EKA +F + P++ T+N ++D L + G+V +
Sbjct: 494 SPD-IITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552
Query: 159 NEFASMKEAGVVPDFISYNTLLNN------LRKIRRL--DLCLIYFRE-----------M 199
F M AG P+ +SYNT+++ + ++ +L D+ LI + M
Sbjct: 553 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 612
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
G+KPD++T LIDS G IE+ L LF +M
Sbjct: 613 VSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREM 647
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 90/226 (39%), Gaps = 22/226 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G + A ++ + F+P+ AY V+ + +D + ++
Sbjct: 434 IYAYCKCGRLDEASLTFNKMQQQG-FMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + F + + E++ P ++ N +I K ++ +A
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552
Query: 124 LIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNE----------------FASM 164
+FD + KP++++YN ++ I G VG V +L++ M
Sbjct: 553 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 612
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G+ PD ++ TL+++ + R++ L FREM K D +T
Sbjct: 613 VSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 658
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 135/307 (43%), Gaps = 40/307 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILK-- 57
N ++ LCK G + A+ + + +R + PN YNC+ A DID++ QI++
Sbjct: 207 NTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERM 266
Query: 58 -----------------------------DLLVSSRTL------SSDCYTNFARAFIMTD 82
D RT ++ Y+ AF+ +
Sbjct: 267 EKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCN 326
Query: 83 DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
+ + E+ P ++ +I ++ ++ A I +K K D YN
Sbjct: 327 NVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYN 386
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
I++ R R+++ F MK AG+ PD +YNTLL+ L K M +
Sbjct: 387 ILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDD 446
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G +P ++T+ L+ + + G +E+L++F M + +I+P+ +Y +LID L K +VD+A
Sbjct: 447 GCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVA 506
Query: 263 MTIFEEM 269
+ +F+EM
Sbjct: 507 IKLFDEM 513
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 128/276 (46%), Gaps = 15/276 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN---AYNCVLVASAETNDIDLSFQILKDL 59
N + LC+ G V AA+ + R + Y+ ++ A N++ L+ ++ ++
Sbjct: 279 NTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEM 338
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI------IVVNRIIFAF 113
+ Y F M TQ ++ AS + N +I F
Sbjct: 339 ADQGYPPDAVMY------FTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGF 392
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ +++ +A +F+ +KG +PD+ TYN +L L + G + + +M + G P
Sbjct: 393 CRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSV 452
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+++ TL++ K + D L FR MGE+ I+P+ + Y LID ++ ++ +++LF++
Sbjct: 453 VTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDE 512
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M++ + ++ Y +L+ L+ + A + ++M
Sbjct: 513 MRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM 548
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 96/194 (49%), Gaps = 5/194 (2%)
Query: 90 FIEEVVQIASPES-IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F+ + + +P + N ++ A ++ + +F ++ KPD++TY I+L+ L
Sbjct: 117 FLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRL 176
Query: 149 GRVGRVNDMLNEFASMKEAG--VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES--GI 204
+ G V D L M G V D + NT+++ L KI RL +++ E G
Sbjct: 177 CKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGC 236
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
P+ +TY L D+ R G+I+ + ++ M+++ + P++ +++ L ++G+V A+
Sbjct: 237 APNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALD 296
Query: 265 IFEEMNSSLSDLAG 278
F E ++ + G
Sbjct: 297 FFREKRTTWLEARG 310
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 129/281 (45%), Gaps = 50/281 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N + L +AGN+ L S+R+ ++ DI +++ IL + L
Sbjct: 135 NSLLSALGRAGNLRGMTELFTSMREASV---------------KPDI-VTYGILLNRLC- 177
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES-----IIVVNRIIFAFAKSR 117
+A ++ D ++ + +++SP S I+++N ++ K
Sbjct: 178 -------------KAGLVGD-------ALKVLDRMSSPGSDVCADIVILNTVVDGLCKIG 217
Query: 118 QIEKALLIFD----HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+++ A++ D + G C P+ +TYN + D RVG ++ M++ GV P+
Sbjct: 218 RLQDAIVFVDERMRQVHG--CAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNV 275
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGI--KPDLLTYTALIDSFGRTGNIEESLRLF 231
I+ NT++ L ++ R+ L +FRE + + + + +TY+ L+ +F N+ ++ LF
Sbjct: 276 ITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELF 335
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++M Q P +Y ++I L + G++ A I M +
Sbjct: 336 HEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKA 376
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P S ++++++ F S + A + D + PD+ T+N +L LGR G + M
Sbjct: 95 PPSASLLSKLLARF--SSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTE 152
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG--IKPDLLTYTALIDS 217
F SM+EA V PD ++Y LLN L K + L M G + D++ ++D
Sbjct: 153 LFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDG 212
Query: 218 FGRTGNIEESLRLFNDMKQQQIR---PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G +++++ +F D + +Q+ P+ Y L D ++G +D+A I E M
Sbjct: 213 LCKIGRLQDAI-VFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERM 266
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/200 (17%), Positives = 78/200 (39%), Gaps = 3/200 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C+ + A +L + ++ + P+ YN +L + D ++L +++
Sbjct: 389 IGGFCRKKRLHEAHQLFEEMKGAGL-QPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDG 447
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S + + + L + + + ++ N +I KSR+++ A+
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD ++ ++ TYN +L L MKE PD+++ + L+ L
Sbjct: 508 KLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWL 567
Query: 184 RKIRRLDLCLIYFREMGESG 203
+I + + + E G
Sbjct: 568 PEIGETERLKCFMEQRDEKG 587
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ L KAG + RLL DK I L ++ + A + D+ QI K +L
Sbjct: 349 IDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGI 408
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + + + F + +++++ SI+ + +I F KS +
Sbjct: 409 SPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFY 468
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+++ + +C+PD I Y+++++ L + G V D L F G+ P+ + NTLL++
Sbjct: 469 LYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFC 528
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+++ + + + MG IK D +TYT LI + G ++E+L LF M ++ +P +
Sbjct: 529 RLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVI 588
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDLA 277
Y +LID L K+ K + IF+ M N+ D+A
Sbjct: 589 TYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIA 623
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
A I + N +I ++ +E AL +F H+ KPD+ T+N ++ R++D
Sbjct: 617 AVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDA 676
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ FA M + P+ I++ L++ + R+D ++ F +M E G +P+L+TY+ LI
Sbjct: 677 VQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHG 736
Query: 218 FGRTGNIEES-LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ ++ ++ ES L+L+N+M + I P+I Y LID L K G + A F
Sbjct: 737 YFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAF 786
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 38/222 (17%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ VV+I +++ + +I A+ K ++KA ++FD + G PDLI Y+I++D L
Sbjct: 294 YFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLF 353
Query: 150 RVGRVND-----------------------------------MLNEFASMKEAGVVPDFI 174
+ GR+ D ++ + M G+ P+ +
Sbjct: 354 KAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVV 413
Query: 175 SYNTLLNNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
S + L+ + R L+ C + F ++ + G +P +LTY+ALI F ++GN+ + L+ D
Sbjct: 414 SCSILIKGFCQNGRILEACGL-FVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYED 472
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT-IFEEMNSSLS 274
M +++ P VY LI+ L K G V A+ F+ +N LS
Sbjct: 473 MIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLS 514
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQI---LKDLL 60
I LCK G V A+R ++ + PN + N +L + I + ++ + L
Sbjct: 489 INGLCKQGLVGDALRFFFQAVNRGL-SPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN 547
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + T++ A F D+ L++F + + + P+ +I +I K ++
Sbjct: 548 IKADTVTYTILIKGAAQFGRVDE--ALMLFFQMLKKDFKPD-VITYCTLIDGLCKLKKSS 604
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
L IFD + PD+ YN+++++ R G + L F + E G PD ++NT++
Sbjct: 605 AGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+RLD + F +M ++P+ +T+T LID+F R G +++++ +F+ M ++
Sbjct: 665 CCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPE 724
Query: 241 PSIYVYRSLIDN-LKKMGKVDLAMTIFEEM 269
P++ Y LI K ++ + ++ EM
Sbjct: 725 PNLVTYSCLIHGYFKSQSMMESGLKLYNEM 754
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 128/272 (47%), Gaps = 3/272 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C+ I+ C+ G + A L + K F P+ Y+ ++ ++ ++ F + +D+
Sbjct: 415 CSILIKGFCQNGRILEACGLFVQIL-KLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y+ L F + V ++ +N ++ +F + + I
Sbjct: 474 IKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCI 533
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A+ ++ + L K D +TY I++ + GRV++ L F M + PD I+Y TL
Sbjct: 534 VGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTL 593
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K+++ L F M ++ + PD+ Y LI+ R G++E +L LF + ++
Sbjct: 594 IDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGP 653
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P ++ + ++I ++D A+ +F +M S
Sbjct: 654 KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTS 685
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 36/300 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
IE C+ G +V + + K IF+ PN +L + +++ +++ +L + R
Sbjct: 174 IESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMR 233
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
Y F+ + L F + +VQ II N+I+ I A
Sbjct: 234 EQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADD 293
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
F+ + + KP+++T++ ++D + G ++ F M GV PD I Y+ L++ L
Sbjct: 294 YFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLF 353
Query: 185 KIRRLD----LCLI-------------------------------YFREMGESGIKPDLL 209
K RL+ L L+ ++ M GI P+++
Sbjct: 354 KAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVV 413
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + LI F + G I E+ LF + + PSI Y +LI K G + ++E+M
Sbjct: 414 SCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
CY NF R DD QL F + + P +I +I AF + +++ A+L+F +
Sbjct: 666 CYCNFKR----LDDAVQL--FAKMTSEQLRPNAI-TFTILIDAFCREGRMDDAMLMFSKM 718
Query: 130 KGLKCKPDLITYN-IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+P+L+TY+ ++ + L + M E + P+ +SY+ L++ L K
Sbjct: 719 LEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGL 778
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ FR + + PD++ YT LI + + G + E++ L+++M ++ P ++ R+
Sbjct: 779 MKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERT 838
Query: 249 LID-NLKKMGKVDLA 262
L + LKK G L
Sbjct: 839 LEEYQLKKAGAKHLC 853
>gi|449485620|ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 1/173 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ I+ N ++F+ K ++++ + D + PD TYNI+L +LG+ + L
Sbjct: 253 SPD-ILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAAL 311
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
N M+E G P+ + + TL+N L + LD C +F E+G +G PD++ YT +I SF
Sbjct: 312 NLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSF 371
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G E++ F++M + P+++ Y S+I +GK A ++ EM S
Sbjct: 372 TEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMES 424
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++YN LL + K+ +LD EM G PD TY L+ G+ +L L
Sbjct: 254 PDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNL 313
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
N M++ P++ + +LI+ L + G +D F+E+ ++
Sbjct: 314 LNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNN 355
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
CK G + RLL + K F P + YN +L + + + +L + +
Sbjct: 267 CKLGKLDQFHRLLDEMARKG-FSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPN 325
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+T + F +E+ ++ +I +F ++ Q EKA FD
Sbjct: 326 VLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFD 385
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ P++ TYN ++ VG+ + + + M+ G P+F+ Y+TL++ LR
Sbjct: 386 EMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAG 445
Query: 188 RLDLCLIYFREMGESGIKPDLLT 210
+L + M E+G L+T
Sbjct: 446 KLGEAHKVIKRMVENGQYAHLMT 468
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
FA+ + + + D + T+ I++ G G ++ F K P
Sbjct: 161 FAECEEFKAMWRVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPY 220
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
SYN +L+ L +++ L + +M PD+LTY L+ S + G +++ RL +
Sbjct: 221 KHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLD 280
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+M ++ P + Y L+ L K K A+ + M
Sbjct: 281 EMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHM 317
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 4/241 (1%)
Query: 33 PNAYNCVLVASAETNDIDL----SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
PN Y+ ++ SA T+ L +F++L ++ + ++ Y + T
Sbjct: 207 PNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAW 266
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F++ + Q +P + N +I F + Q+++A+ +FD +K PD +Y+I++D L
Sbjct: 267 NFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGL 326
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G V + M G+ P +SY++LL+ L + +++L FR + E G K D
Sbjct: 327 CKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDH 386
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ Y+ +++ + NIE L+NDM P Y Y SLI + + A+ +FE
Sbjct: 387 IVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFEL 446
Query: 269 M 269
M
Sbjct: 447 M 447
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 1/266 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ LC+AG V A L + L ++ + Y+ +L + +I++ + D++ +
Sbjct: 358 LHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNF 417
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT+ AF + T L E ++ +++ ++ F K R I++A L
Sbjct: 418 VPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFL 477
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
++ P+L Y ++++ L +V + + + FA M + G VPD + Y+ ++++
Sbjct: 478 FLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFV 537
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K +L F +M + G KP++ TYT+LI+ + E + LF M + + P
Sbjct: 538 KALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRI 597
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
+Y SLI K + A+ IF M
Sbjct: 598 LYTSLIVCYCKRSNMKAALEIFRGMG 623
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 3/254 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I C+ N++ A+ + + + D + PN C ++ + ID +F L +
Sbjct: 428 IYAFCRHRNLTDALGVFELMLDSGVS-PNVVTCTILVDGFGKERMIDEAFLFLHKVRQFG 486
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + ++++ +V + II +F K+ ++ +A
Sbjct: 487 IVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAF 546
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + KP++ TY +++ L R+ +++ F M G+ PD I Y +L+
Sbjct: 547 RLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCY 606
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + L FR MG+ G+ D YT LI F + ++ + L +M + + PS+
Sbjct: 607 CKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSV 666
Query: 244 YVYRSLIDNLKKMG 257
Y +LI K+G
Sbjct: 667 VTYTNLIIGYFKIG 680
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 3/242 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C ++ K + A L +R I +PN Y ++ + N D + I D+
Sbjct: 459 CTILVDGFGKERMIDEAFLFLHKVRQFGI-VPNLCMYRVIINGLCKVNKSDHVWGIFADM 517
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y+ +F+ + +++ + ++ +I ++
Sbjct: 518 IKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRL 577
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ + +F H+ PD I Y ++ + + L F M + G+ D Y L
Sbjct: 578 PEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCL 637
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ K+ +D EM G+ P ++TYT LI + + G+ ++ +N M Q I
Sbjct: 638 IGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGI 697
Query: 240 RP 241
P
Sbjct: 698 TP 699
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 15/278 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC+A V AV +L+ + + + P+ + ++ E I+ + L
Sbjct: 185 NTLMKALCRAHQVRTAVIMLEEMSSRGV-APDETTFTTLMQGFVEEGSIEAA------LR 237
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQL------LIFIEEVVQIASPESIIVVNRIIFAFA 114
V +R L C ++ + +L L +I++ + I N +
Sbjct: 238 VKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLC 297
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ + AL + D + PD+ TYNIV++ L + G++ + M + G +PD
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++NTL+ L RL+ L R++ G+ PD+ T+ LI++ + G+ +LRLF +M
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
K P Y +LIDNL +GK+ A+ + ++M S+
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D L ++ +VQ + N ++ K+ Q+E+A I + +
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C PD+ T+N ++ L R+ + L+ + GV PD ++N L+N L K+
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L L F EM SG PD +TY LID+ G + ++L L DM+ S Y ++I
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
D L K +++ A +F++M+
Sbjct: 469 DGLCKKMRIEEAEEVFDQMD 488
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 10/283 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+ NGY CK G V A+ +Q + F P+ YN + + + + + +++
Sbjct: 257 LINGY----CKLGRVEDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ Y + + ++V I N +I A +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+AL + + PD+ T+NI+++ L +VG + L F MK +G PD ++YNT
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++NL + +L L ++M +G +TY +ID + IEE+ +F+ M Q
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
I + + +LID L K K+D A FE +N +S+ P +
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDA---FELINQMISEGLQPNN 531
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 9/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLL----QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N ++ LC+ +V A++++ Q D ++F YN V+ + ++ + IL
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF---TYNIVVNCLCKNGQLEEAKGILNQ 346
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV-VQIASPESIIVVNRIIFAFAKSR 117
++ + A + + L +V V+ SP+ + N +I A K
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD-VYTFNILINALCKVG 405
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
AL +F+ +K C PD +TYN ++D L +G++ L+ M+ G I+YN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T+++ L K R++ F +M GI + +T+ LID + I+++ L N M +
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++P+ Y S++ + K G + A I E M ++
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I LC + A+ L + + K + P+ Y N ++ A + D L+ ++ +++
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVS-PDVYTFNILINALCKVGDPHLALRLFEEMK 418
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S T Y + L ++++ P S I N II K +IE
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + + IT+N ++D L + +++D M G+ P+ I+YN++L
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + M +G + D++TY LI+ + G + +L++ M+ + +R
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
P+ Y ++ +L + + A+++F EM +++ P D
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREM----AEVGEPPD 635
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + A +L + D+ LP+ +N ++ A N ++ + + + V+ + +
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGC-LPDITTFNTLIAALCTGNRLEEALDLARQ--VTVKGV 387
Query: 67 SSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S D YT A D L EE+ + N +I ++ KAL
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ ++ C ITYN ++D L + R+ + F M G+ + I++NTL++ L
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K +++D +M G++P+ +TY +++ + + G+I+++ + M +
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L K G+ +A+ + M
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGM 592
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G+ A+RL + +++ P+ YN ++ + + +LKD+ +
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIF-IEEVVQIASPESI----IVVNRIIFAFAKSRQ 118
S+ Y I+ C ++ I EEV + I I N +I K ++
Sbjct: 457 CPRSTITYNT-----IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ A + + + +P+ ITYN +L + G + + +M G D ++Y T
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K R + L R M G++P Y ++ S R NI ++L LF +M +
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 239 IRPSIYVYRSLIDNLKKMG 257
P Y+ + L + G
Sbjct: 632 EPPDALTYKIVFRGLCRGG 650
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ A ++ Q+ A+++ + + PD T+ ++ G + L A
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G ++ N L+N K+ R++ L Y ++ G +PD +TY ++ +
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +L++ + M Q+ P ++ Y +++ L K G+++ A I +M
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 39 VLVASAETNDIDLSFQILKDLLVSSR-TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQI 97
+L A E D D + ++L L + Y R + + + E+ +
Sbjct: 44 LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKAL-LIFDHIKGL-KCKPDLITYNIVLDILGRVGRVN 155
+ VV+ + ++ + + A+ LI + ++ L + D + YN +L++L ++
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ + ++ M G+ PD +++NTL+ L + ++ +I EM G+ PD T+T L+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
F G+IE +LR+ M + + LI+ K+G+V+ A+ ++
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
IE C+ V A++LL +RD+ P+ YN ++ + +D + + L D+ S
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGC-TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + R+ T + ++++ S++ N +I + + +A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + C+P+ ++YN +L + +++ + M G PD ++YNT+L L
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +++ + ++ G P L+TY +ID + G ++++L ++M+ + ++P
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEE 268
Y SL+ L + GKVD A+ F E
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHE 509
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 131/267 (49%), Gaps = 11/267 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +CK G + A++ L + PN +N +L + T + ++L D+L
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 61 ---VSSRTLSSDCYTNF-ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
S ++ + NF R ++ + + +E++ Q + + N ++ F K
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLG----RAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++++A+ + + C PD++TYN +L L + G+V D + + G P I+Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NT+++ L K + + EM +KPD +TY++L+ R G ++E+++ F++ ++
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAM 263
IRP+ + S++ L K + D A+
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 3/200 (1%)
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
N R + T + + F+E +V + II +I F + + KA I + ++G
Sbjct: 107 NHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGS 166
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
PD+ITYN+++ + G +N+ L+ M V PD ++YNT+L +L +L
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQA 223
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ M + PD++TYT LI++ R + +++L ++M+ + P + Y L++
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
+ K G++D A+ +M SS
Sbjct: 284 ICKEGRLDEAIKFLNDMPSS 303
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC +G + A+ +L + ++ + P+ Y ++ A+ + + + ++L ++
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS-RQI 119
T Y + + F+ ++ ++I N I+ + + R +
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 120 EKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ L+ D + KG P ++T+NI+++ L R G + ++ M + G P+ +SYN
Sbjct: 327 DAEKLLADMLRKGFS--PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ K +++D + Y M G PD++TY ++ + + G +E+++ + N + +
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y ++ID L K GK A+ + +EM +
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 94/171 (54%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ ++ N I+ + S ++++A+ + D + C PD+ITY I+++ R V +
Sbjct: 201 SPD-VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M++ G PD ++YN L+N + K RLD + + +M SG +P+++T+ ++ S
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TG ++ +L DM ++ PS+ + LI+ L + G + A+ I E+M
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 122/272 (44%), Gaps = 6/272 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C I C+ G A ++L+ L +P+ YN ++ + +I+ + +L +
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGA-VPDVITYNVMISGYCKAGEINNALSVLDRM 198
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
VS ++ Y R+ + Q + ++ ++Q +I +I A + +
Sbjct: 199 SVSPDVVT---YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A+ + D ++ C PD++TYN++++ + + GR+++ + M +G P+ I++N +
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L ++ R +M G P ++T+ LI+ R G + ++ + M Q
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P+ Y L+ K K+D A+ E M S
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ +C G A +LL + K F P+ +N ++ + + IL+ +
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+S Y F + + ++E +V I+ N ++ A K ++E A+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + C P LITYN V+D L + G+ + M+ + PD I+Y++L+ L
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ ++D + +F E GI+P+ +T+ +++ ++ + ++ M + +P+
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI+ L G A+ + E+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G V AV +L L K + YN V+ A+ + ++L ++
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y++ + + F E ++ + + N I+ KSRQ ++
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 122 AL--LIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFAS 163
A+ L+F +G CKP+ +Y I+++ L G ++LNE +
Sbjct: 538 AIDFLVFMINRG--CKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 130/261 (49%), Gaps = 3/261 (1%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
++++A R S+ + PN YN ++ A + IL+D+ + +
Sbjct: 129 ASLTSARRFFDSMLSDGV-APNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVT 187
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y AF + + ++ +++ N ++ K+ ++E A +FD +
Sbjct: 188 YNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMM 247
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD ++YN ++ + G ++ L+ FA M + G++PD +++ +L++ + K L+
Sbjct: 248 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 307
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ R+M E G++ + +T+TALID F + G ++++L M+Q +I+PS+ Y +LI
Sbjct: 308 WAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALI 367
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ +G++D A + EM +
Sbjct: 368 NGYCMVGRMDEARELLHEMEA 388
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 34/254 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I +CKAGN+ AV L++ +R++ + + N++ +F L D
Sbjct: 297 IHVMCKAGNLEWAVTLVRQMRERGL--------------QMNEV--TFTALID------- 333
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
F + + D L+ + + Q S++ N +I + ++++A +
Sbjct: 334 -------GFCKKGFLDDA----LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAREL 382
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ KPD++TY+ ++ + + M E GV+PD I+Y++L+ L +
Sbjct: 383 LHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCE 442
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+RL + F+ M + G++PD TYT+LID + GN+E +L L + M + + P +
Sbjct: 443 EKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVT 502
Query: 246 YRSLIDNLKKMGKV 259
Y LI+ L K +
Sbjct: 503 YSVLINGLSKSARA 516
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 115/269 (42%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +AG V A RL+ + D + PN +N ++ + ++ + ++ +++
Sbjct: 189 NTLVAAFFRAGEVDGAERLVGMMLDGGL-KPNLVTFNSMVNGMCKAGKMEDARKVFDEMM 247
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + L E+ Q ++ +I K+ +E
Sbjct: 248 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 307
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + ++ + + +T+ ++D + G ++D L M++ + P + YN L+
Sbjct: 308 WAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALI 367
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N + R+D EM G+KPD++TY+ +I ++ + + + L M ++ +
Sbjct: 368 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 427
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI L + ++ A +F+ M
Sbjct: 428 PDAITYSSLIRVLCEEKRLSDAHVLFKNM 456
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +CKAG + A ++ + + + P+ +YN ++ + + + ++
Sbjct: 224 NSMVNGMCKAGKMEDARKVFDEMMREGL-APDGVSYNTLVGGYCKAGCSHEALSVFAEMT 282
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+T+ + + + ++ + + + +I F K ++
Sbjct: 283 QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 342
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
ALL ++ + KP ++ YN +++ VGR+++ M+ G+ PD ++Y+T++
Sbjct: 343 DALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 402
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K ++M E G+ PD +TY++LI + ++ LF +M + ++
Sbjct: 403 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQ 462
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y SLID K G V+ A+++ ++M
Sbjct: 463 PDEFTYTSLIDGHCKEGNVERALSLHDKM 491
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 34/136 (25%)
Query: 168 GVVPDFISYNTLL-----NNLRKIRRL---------------------DLC--------L 193
G VP ++YN +L +L RR LC L
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
R+M +G P+++TY L+ +F R G ++ + RL M ++P++ + S+++ +
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 254 KKMGKVDLAMTIFEEM 269
K GK++ A +F+EM
Sbjct: 231 CKAGKMEDARKVFDEM 246
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ E+ Q + ++ N +I F + +++EKAL + + ++G C L+T+ I++D
Sbjct: 164 LLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFC 223
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G++++ + MK G+ D I Y +L+ LD F E+ E G P +
Sbjct: 224 KAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY LI F + G ++E+ +F M ++ +RP++Y Y LID L +GK A+ + M
Sbjct: 284 TYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I KLCK V+ A+ +++ ++ + N YN +L D+D + ++L +L S
Sbjct: 359 INKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 65 TLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
D + + Q L + +V+ I+ N ++ + KS + KA
Sbjct: 419 YTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKA 478
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ ++ I K P+ TY ++D + G +N M+ + + P YN LL++
Sbjct: 479 MELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSS 538
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K LD F EM PD++++ +ID + G+I+ + L M + P
Sbjct: 539 LCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPD 598
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y LI+ K+G +D A++ F++M
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 127/274 (46%), Gaps = 5/274 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ AV LL+ +R +N +P+ +YN V+ E +++ + Q+ ++ S
Sbjct: 149 LKGLCRNLEFGKAVSLLREMR-QNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSG 207
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ S + AF + + ++E+ +IV +I F ++++
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGK 267
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD + P ITYN ++ ++GR+ + F M E GV P+ +Y L++ L
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ + L M + +P+++TY +I+ + + ++L + MK+++ RP
Sbjct: 328 CGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
Y SL+ L G +D A + M +SS +D
Sbjct: 388 ITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Query: 141 YNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
YNI+L L R G+ +L E M++ ++PD +SYNT++ + + L+ L
Sbjct: 145 YNILLKGLCRNLEFGKAVSLLRE---MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLAN 201
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM SG L+T+ LID+F + G ++E++ L +MK + + + VY SLI G
Sbjct: 202 EMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCG 261
Query: 258 KVDLAMTIFEEM 269
++D +F+E+
Sbjct: 262 ELDRGKALFDEV 273
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 3 NGYIEKLCKAGNVSAAVR----LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N I LCK + A+ L++ L +I N +L ++ ++ D++ + ++ K
Sbjct: 428 NALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNI---LLNSTLKSGDVNKAMELWKQ 484
Query: 59 LLVSSRTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ S +SD YT F T + + L+ + ++ P S+ N ++ + K
Sbjct: 485 ISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSEL--PPSVFDYNCLLSSLCKK 542
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++A +F+ ++ PD+I++NI++D + G + + M AG+ PD +Y
Sbjct: 543 GTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTY 602
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ L+N K+ LD + +F +M +SG +PD
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMIDSGFEPD 633
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ +SR E A + + + ++ + +L+ ++ + A M +
Sbjct: 76 NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G + +YN LL L + + REM ++ + PD+++Y +I F +E+
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L+L N+M+ S+ + LID K GK+D AM + +EM
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEM 238
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L G +S A L + K + +PN YN ++ A + +D + +L+ + +S
Sbjct: 279 IHGLFMEGEISKACNLFNEMVQKGV-VPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT + + +E+ + I+ N ++ + K ++ ++A
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF I KPD+I+Y+I+L GR DM N F SM + G+V D +N L+N
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +D L+ F EM G+ P+++TY +I + R G + +++ + M ++P+
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY SLI G + A + EM
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEM 543
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 112/215 (52%), Gaps = 9/215 (4%)
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
D +V++ L CY TD+ +L+ + ++ N +I +
Sbjct: 199 DGIVTNTFLKCLCYAK------RTDEALSMLL--HRMSELGCVPDAFSYNTVIKSLCGGS 250
Query: 118 QIEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ ++AL ++ KG C PD+++Y +V+ L G ++ N F M + GVVP+ ++Y
Sbjct: 251 RSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTY 310
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N++++ L K R +D + R+M ++ I+PD +TYTA+I + G +E+ ++F +M +
Sbjct: 311 NSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTR 370
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + P I + SL+D+L K + A IF + +
Sbjct: 371 EGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIAT 405
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 9/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVA----SAETNDIDLSFQIL 56
N +++ LC A A+ +L + +P+A YN V+ + S +D+ ++
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K S +S YT M + ++ E+VQ +++ N I+ A K+
Sbjct: 264 KGDGCSPDVVS---YTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKA 320
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
R ++KA L+ + +PD +TY ++ +GR + F M G++PD +++
Sbjct: 321 RAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTF 380
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L+++L K +R F + G KPD+++Y+ L+ + G + LF+ M
Sbjct: 381 NSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTD 440
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I + + LI+ K G +D A+ IF EM
Sbjct: 441 NGIVADSHCFNILINAHAKRGMMDEALLIFTEM 473
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 125/269 (46%), Gaps = 4/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I K G + A+ + +R + + PN Y V+ A + + + L ++
Sbjct: 454 INAHAKRGMMDEALLIFTEMRGQGVS-PNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKA 122
++ Y + + F D + + E++ P +I + II + ++ A
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNA 572
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F+ + + +PD+ T+N ++D VG+++ +M AG PD ++Y+TL+N
Sbjct: 573 QDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLING 632
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K R+D LI FREM +KP +TY+ ++D R G + ++F++M + S
Sbjct: 633 YFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMS 692
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y ++ L + D A+T+F ++ +
Sbjct: 693 ISTYTIILQGLCRNNCTDEAITLFHKLGA 721
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 119/270 (44%), Gaps = 4/270 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ C G++ A L+ + D+ I PN + ++ S ++ Q + +L++
Sbjct: 524 IQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIG 583
Query: 65 TLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
D +T + + + + ++ +V + ++ + +I + KS +I+
Sbjct: 584 D-RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDG 642
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L++F + + KP +TY++VLD L R GR + F M E+G +Y +L
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQG 702
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L + D + F ++G +K ++ +I + + EE+ LF + + P+
Sbjct: 703 LCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPN 762
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +I NL K G V+ A +F M +
Sbjct: 763 ASTYGVMIINLLKEGSVEEADIMFSSMEKT 792
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK-------ALLIFDHIKGLK 133
T+D L +E+++ +P +N + A A++R A+ +F+ I +
Sbjct: 99 TEDAHHLF---DELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREE 155
Query: 134 CKPDLI-----TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
P ++ TY I++D R R + FA + AG+ D I NT L L +R
Sbjct: 156 AGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKR 215
Query: 189 LDLCL-IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVY 246
D L + M E G PD +Y +I S +E+L + M K P + Y
Sbjct: 216 TDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSY 275
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+I L G++ A +F EM
Sbjct: 276 TMVIHGLFMEGEISKACNLFNEM 298
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK ++ A L + K I P+ YN ++ + ++L +++
Sbjct: 259 NTIIDGLCKYKHIDDAFALFNKMETKGI-RPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ AF+ + +E+++ + I + +I F +++
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + C P+++TYN ++ + RV + + F M + G+V + ++YNTL+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + D+ F++M G+ PD++TY+ L+D + G +E++L +F +++ ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
P IY Y +I+ + K GKV+ +F
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLF 523
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 134/271 (49%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC G S A RLL ++ ++ I PN ++ ++ A + + + ++ +++
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R++ D Y++ F M D + E ++ +++ N +I F K+++
Sbjct: 353 --KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+ + +F + + +TYN ++ L + G + F M GV PD I+Y+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL+ L K +L+ L+ F + +S ++PD+ TY +I+ + G +E+ LF + +
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P++ +Y ++I + G + A +F EM
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++++V++ + N +I + +A+ + D + C+PDL+TY V++ L
Sbjct: 172 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLC 231
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ L+ M++ + D + YNT+++ L K + +D F +M GI+PD+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVF 291
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +LI G ++ RL ++M +++I P++ + +LID K GK+ A +++EM
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 131/277 (47%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ LCK G++ A+ LL+ + I YN ++ + ID +F + + ++
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM--ETK 284
Query: 65 TLSSD---------CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+ D C N+ R D ++LL +++ +++ + +I AF K
Sbjct: 285 GIRPDVFTYNSLISCLCNYGR----WSDASRLL---SNMIERKINPNVVTFSALIDAFVK 337
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A ++D + PD+ TY+ +++ R+++ + F M P+ ++
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNTL+ K +R++ + FREM + G+ + +TY LI + G+ + + ++F M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y L+D L K GK++ A+ +FE + S
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 102/201 (50%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + + ++ + ++++VQ ++ ++ K I+ AL + ++
Sbjct: 188 FNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKME 247
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + D++ YN ++D L + ++D F M+ G+ PD +YN+L++ L R
Sbjct: 248 KGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWS 307
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
M E I P+++T++ALID+F + G + E+ +L+++M ++ I P I+ Y SLI
Sbjct: 308 DASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A +FE M S
Sbjct: 368 NGFCMHDRLDEAKHMFELMIS 388
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 94/177 (53%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+VQ SI+ N+++ A AK ++ + + + + ++ L+ DL +YNI+++ R
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++ L M + G PD ++ ++LLN +R+ + +M E G KPD +T+
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFN 189
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI E++ L + M Q+ +P + Y ++++ L K G +DLA+++ ++M
Sbjct: 190 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM 246
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 88/165 (53%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F + Q+ AL + + L +PD++T + +L+ R++D + M E
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 178
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD +++NTL++ L + + +M + G +PDL+TY A+++ + G+I+
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+L L M++ +I + +Y ++ID L K +D A +F +M +
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMET 283
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 78/152 (51%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ +F + + P ++ +N +L + ++ + + +++ M+ + D SYN
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + +L L L +M + G +PD++T ++L++ + + I +++ L + M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P + +LI L K A+ + ++M
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQM 211
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
IE C+ V A++LL +RD+ P+ YN ++ + +D + + L D+ S
Sbjct: 246 IEATCRDSGVGQAMKLLDEMRDRGC-TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + R+ T + ++++ S++ N +I + + +A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + C+P+ ++YN +L + +++ + M G PD ++YNT+L L
Sbjct: 365 DILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +++ + ++ G P L+TY +ID + G ++++L ++M+ + ++P
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEE 268
Y SL+ L + GKVD A+ F E
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHE 509
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 131/267 (49%), Gaps = 11/267 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +CK G + A++ L + PN +N +L + T + ++L D+L
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 61 ---VSSRTLSSDCYTNF-ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
S ++ + NF R ++ + + +E++ + + + N ++ F K
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLG----RAIDILEKMPKHGCQPNSLSYNPLLHGFCKE 392
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++++A+ + + C PD++TYN +L L + G+V D + + G P I+Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NT+++ L K + + EM +KPD +TY++L+ R G ++E+++ F++ ++
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+RP+ + S++ L K + D A+
Sbjct: 513 MGVRPNAVTFNSIMLGLCKTRQTDRAI 539
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 3/200 (1%)
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
N R + T + + F+E +V + II +I F + + KA I + ++G
Sbjct: 107 NHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGS 166
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
PD+ITYN+++ + G +N+ L+ M V PD ++YNT+L +L +L
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQA 223
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ M + PD++TYT LI++ R + ++++L ++M+ + P + Y L++
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
+ K G++D A+ +M SS
Sbjct: 284 ICKEGRLDEAIKFLNDMPSS 303
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 135/312 (43%), Gaps = 53/312 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CKAG ++ A+ +L D+ P+ YN +L + ++ + + ++L
Sbjct: 176 NVMISGYCKAGEINNALSVL----DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL---- 227
Query: 61 VSSRTLSSDCYTNFARAFIMTD------DCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
R L DCY + I+ + Q + ++E+ ++ N ++
Sbjct: 228 --DRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITY--------------------------------- 141
K ++++A+ + + C+P++IT+
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 142 --NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
NI+++ L R G + ++ M + G P+ +SYN LL+ K +++D + Y M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G PD++TY ++ + + G +E+++ + N + + P + Y ++ID L K GK
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 260 DLAMTIFEEMNS 271
A+ + +EM +
Sbjct: 466 GKAIKLLDEMRA 477
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 123/272 (45%), Gaps = 6/272 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C I C+ G A ++L+ L +P+ YN ++ + +I+ + +L +
Sbjct: 140 CTTLIRGFCRMGKTRKAAKILEVLEGSGA-VPDVITYNVMISGYCKAGEINNALSVLDRM 198
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
VS ++ Y R+ + Q + ++ ++Q +I +I A + +
Sbjct: 199 SVSPDVVT---YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A+ + D ++ C PD++TYN++++ + + GR+++ + M +G P+ I++N +
Sbjct: 256 GQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L ++ R +M G P ++T+ LI+ R G + ++ + M +
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC 375
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P+ Y L+ K K+D A+ E M S
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ +C G A +LL + K F P+ +N ++ + + IL+ +
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+S Y F + + ++E +V I+ N ++ A K ++E A+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + C P LITYN V+D L + G+ + M+ + PD I+Y++L+ L
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ ++D + +F E G++P+ +T+ +++ +T + ++ M + +P+
Sbjct: 495 SREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTE 554
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI+ L G A+ + E+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 4/165 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G V AV +L L K + YN V+ A+ + ++L ++
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y++ + + F E ++ + + N I+ K+RQ ++
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDR 537
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFAS 163
A+ ++ CKP +Y I+++ L G ++LNE +
Sbjct: 538 AIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCN 582
>gi|260780314|gb|ACX50703.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780316|gb|ACX50704.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780320|gb|ACX50706.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780322|gb|ACX50707.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780326|gb|ACX50709.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780328|gb|ACX50710.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780334|gb|ACX50713.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780336|gb|ACX50714.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780350|gb|ACX50721.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780354|gb|ACX50723.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780356|gb|ACX50724.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780360|gb|ACX50726.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780362|gb|ACX50727.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780364|gb|ACX50728.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780366|gb|ACX50729.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780368|gb|ACX50730.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780370|gb|ACX50731.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780372|gb|ACX50732.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780374|gb|ACX50733.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780376|gb|ACX50734.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780378|gb|ACX50735.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780380|gb|ACX50736.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780382|gb|ACX50737.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780384|gb|ACX50738.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780386|gb|ACX50739.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780390|gb|ACX50741.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780392|gb|ACX50742.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVY 246
ALID+ + G ++E++ LF M++++ ++Y Y
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTY 196
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E GV VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGVQVPPHV-FSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E G++ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGVQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N ++ L K G+V A +D ++N +L + +D + +I+ ++
Sbjct: 239 NVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQ 298
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ YT F + D + E+ + + ++I + A K++Q+ KA
Sbjct: 299 GFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKA 358
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L +++ +K C PD Y+ ++ +L + GR+ D + F MK+ GV PD ++YNT++ +
Sbjct: 359 LEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITS 418
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ L R M E KPD+ TY L+ R I+ L N M + I
Sbjct: 419 ACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISID 478
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y L+ L K GK++LA + FEEM
Sbjct: 479 LGTYVLLVGGLCKSGKLELACSFFEEM 505
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+ + S++ + +++ A++ + A+ F I+ L + D+ N+++D L
Sbjct: 187 LVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALV 246
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G V + F K++ V DF S+N LL+ K R+LD EM + G +P+++
Sbjct: 247 KEGSVEHAYSAFMEFKDSIHV-DFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVV 305
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+YT I+ + + + +F++M+++ +P++ Y + L K +V+ A+ ++E M
Sbjct: 306 SYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMM 365
Query: 270 NSS 272
S+
Sbjct: 366 KSN 368
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F + Q SP+ ++ N +I + + E AL + ++ CKPD+ TY +L +
Sbjct: 396 VFEDMKKQGVSPD-LLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMC 454
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R R+ + M + + D +Y L+ L K +L+L +F EM G+ P
Sbjct: 455 CRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRD 514
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
TY L++ + E ++ M Q + + +I
Sbjct: 515 RTYKMLVEELEQNNLTEAKEKIQKLMFQTEDQTAI 549
>gi|356541205|ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Glycine max]
Length = 768
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 34/274 (12%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL--VSSRTLSSD 69
+ N + A++LL ++ ++ YN +LVA E N + L+ I LL V S+++++
Sbjct: 120 SSNFNLALQLLDYVQHLHLDPSPIYNSLLVALLEKNQLTLALSIFFKLLGAVDSKSITA- 178
Query: 70 CYTNFARAFIMTDDCTQLLIFI---------EEVVQIASPE-----SIIVVNRIIFAFAK 115
C QLL+ + E+V Q + N I AF
Sbjct: 179 --------------CNQLLVALRKADMRVEFEQVFQRLREKRGFSFDTWGYNVCIHAFGC 224
Query: 116 SRQIEKALLIFDHIKGLK---CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+ +F +KG PDL TYN ++ L R+G+V+D + + + + PD
Sbjct: 225 WGDLATCFALFKEMKGGNKGFVAPDLCTYNSLITALCRLGKVDDAITVYEELNGSAHQPD 284
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+Y L+ K R++ + F +M +G +PD L Y +L+D + + E+ +LF
Sbjct: 285 RFTYTNLIQACSKTYRMEDAIRIFNQMQSNGFRPDTLAYNSLLDGHFKATKVMEACQLFE 344
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
M Q+ +RPS + Y LI L + G+ + A T+F
Sbjct: 345 KMVQEGVRPSCWTYNILIHGLFRNGRAEAAYTMF 378
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 10/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ L + G S LL S+ + L P++ N +L + +++ +L+ Q+L D +
Sbjct: 79 LRTLSREGFYSDIPSLLHSMTQAGVVLDPHSLNHLLRSFIISSNFNLALQLL-DYVQHLH 137
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR---QIEK 121
S Y + A + + T L +++ +SI N+++ A K+ + E+
Sbjct: 138 LDPSPIYNSLLVALLEKNQLTLALSIFFKLLGAVDSKSITACNQLLVALRKADMRVEFEQ 197
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG---VVPDFISYNT 178
+G D YN+ + G G + F MK V PD +YN+
Sbjct: 198 VFQRLREKRGFSF--DTWGYNVCIHAFGCWGDLATCFALFKEMKGGNKGFVAPDLCTYNS 255
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ L ++ ++D + + E+ S +PD TYT LI + +T +E+++R+FN M+
Sbjct: 256 LITALCRLGKVDDAITVYEELNGSAHQPDRFTYTNLIQACSKTYRMEDAIRIFNQMQSNG 315
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RP Y SL+D K KV A +FE+M
Sbjct: 316 FRPDTLAYNSLLDGHFKATKVMEACQLFEKM 346
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN + L KA ++ Q LR+K F + YN + A D+ F + K++
Sbjct: 179 CNQLLVALRKADMRVEFEQVFQRLREKRGFSFDTWGYNVCIHAFGCWGDLATCFALFKEM 238
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ F+ D CT N +I A + ++
Sbjct: 239 KGGNK------------GFVAPDLCT--------------------YNSLITALCRLGKV 266
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A+ +++ + G +PD TY ++ + R+ D + F M+ G PD ++YN+L
Sbjct: 267 DDAITVYEELNGSAHQPDRFTYTNLIQACSKTYRMEDAIRIFNQMQSNGFRPDTLAYNSL 326
Query: 180 LN-NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + + + ++ C + F +M + G++P TY LI R G E + +F D+K++
Sbjct: 327 LDGHFKATKVMEACQL-FEKMVQEGVRPSCWTYNILIHGLFRNGRAEAAYTMFCDLKKKG 385
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y ++ L K G+++ A+ + EEM S
Sbjct: 386 QFVDGITYSIVVLQLCKEGQLEEALQLVEEMES 418
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N I+ +F K +A I + C D+ TYN+++ LG++GR + +
Sbjct: 601 NSIMSSFVKKGYFAEAWAILTEMGEKFCPTDIATYNMIIQGLGKMGRADLASAVLDRLLR 660
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G D + YNTL+N L K R+D F +M SGI PD++TY LI+ + G +++
Sbjct: 661 QGGYLDIVMYNTLINALGKASRIDEVNKLFEQMRSSGINPDVVTYNTLIEVHSKAGRLKD 720
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+ + M P+ +V + +D L +
Sbjct: 721 AYKFLKMMLDAGCSPN-HVTDTTLDYLGR 748
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 21/273 (7%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPNAYNCVL-VASAETNDIDLSFQILKDLLVSSRTLSSDC 70
A + S +R + R + P AY+ +L S E D+ +L + + L
Sbjct: 51 AHHASHKLRFFEWSRSHHCPSPAAYSVILRTLSREGFYSDIP-SLLHSMTQAGVVLDPHS 109
Query: 71 YTNFARAFIMTDD---CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ R+FI++ + QLL +++ + SP + N ++ A + Q+ AL IF
Sbjct: 110 LNHLLRSFIISSNFNLALQLLDYVQHLHLDPSP----IYNSLLVALLEKNQLTLALSIFF 165
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM-----KEAGVVPDFISYNTLLNN 182
+ G + N +L L R DM EF + ++ G D YN ++
Sbjct: 166 KLLGAVDSKSITACNQLLVAL----RKADMRVEFEQVFQRLREKRGFSFDTWGYNVCIHA 221
Query: 183 LRKIRRLDLCLIYFREM--GESG-IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L C F+EM G G + PDL TY +LI + R G +++++ ++ ++
Sbjct: 222 FGCWGDLATCFALFKEMKGGNKGFVAPDLCTYNSLITALCRLGKVDDAITVYEELNGSAH 281
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+P + Y +LI K +++ A+ IF +M S+
Sbjct: 282 QPDRFTYTNLIQACSKTYRMEDAIRIFNQMQSN 314
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
F+I D V + + Y + +F+ + + E+ + P I N II
Sbjct: 585 FEIFSDAGVDPVSYT---YNSIMSSFVKKGYFAEAWAILTEMGEKFCPTDIATYNMIIQG 641
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K + + A + D + D++ YN +++ LG+ R++++ F M+ +G+ PD
Sbjct: 642 LGKMGRADLASAVLDRLLRQGGYLDIVMYNTLINALGKASRIDEVNKLFEQMRSSGINPD 701
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
++YNTL+ K RL + + M ++G P+ +T T L D GR
Sbjct: 702 VVTYNTLIEVHSKAGRLKDAYKFLKMMLDAGCSPNHVTDTTL-DYLGR 748
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 2/177 (1%)
Query: 95 VQIASPESIIV--VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
VQ P+S V VN + F ++ A +F+ P TYN ++ + G
Sbjct: 552 VQEKGPDSFDVDMVNTFLSIFLAKGKLSLACKLFEIFSDAGVDPVSYTYNSIMSSFVKKG 611
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ M E D +YN ++ L K+ R DL + G D++ Y
Sbjct: 612 YFAEAWAILTEMGEKFCPTDIATYNMIIQGLGKMGRADLASAVLDRLLRQGGYLDIVMYN 671
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI++ G+ I+E +LF M+ I P + Y +LI+ K G++ A + M
Sbjct: 672 TLINALGKASRIDEVNKLFEQMRSSGINPDVVTYNTLIEVHSKAGRLKDAYKFLKMM 728
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 4/240 (1%)
Query: 13 GNVSAAVRLLQSLR--DKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
G+++ L + ++ +K P+ YN ++ A +D + + ++L S+
Sbjct: 226 GDLATCFALFKEMKGGNKGFVAPDLCTYNSLITALCRLGKVDDAITVYEELNGSAHQPDR 285
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
YTN +A T + ++ + N ++ K+ ++ +A +F+
Sbjct: 286 FTYTNLIQACSKTYRMEDAIRIFNQMQSNGFRPDTLAYNSLLDGHFKATKVMEACQLFEK 345
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ +P TYNI++ L R GR F +K+ G D I+Y+ ++ L K +
Sbjct: 346 MVQEGVRPSCWTYNILIHGLFRNGRAEAAYTMFCDLKKKGQFVDGITYSIVVLQLCKEGQ 405
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L+ L EM G DL+T T+L+ S R G + + RL +++ + S+ +++
Sbjct: 406 LEEALQLVEEMESRGFVVDLVTITSLLISIHRHGRWDWTDRLMKHIREGDLALSVLKWKA 465
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D+ N L I G+++ F +AGV P +YN+++++ K
Sbjct: 561 DVDMVNTFLSIFLAKGKLSLACKLFEIFSDAGVDPVSYTYNSIMSSFVKKGYFAEAWAIL 620
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EMGE D+ TY +I G+ G + + + + + +Q I +Y +LI+ L K
Sbjct: 621 TEMGEKFCPTDIATYNMIIQGLGKMGRADLASAVLDRLLRQGGYLDIVMYNTLINALGKA 680
Query: 257 GKVDLAMTIFEEMNSS 272
++D +FE+M SS
Sbjct: 681 SRIDEVNKLFEQMRSS 696
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I++ N +I A K+ +I++ +F+ ++ PD++TYN ++++ + GR+ D
Sbjct: 667 IVMYNTLINALGKASRIDEVNKLFEQMRSSGINPDVVTYNTLIEVHSKAGRLKDAYKFLK 726
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRL 189
M +AG P+ ++ TL R+I +L
Sbjct: 727 MMLDAGCSPNHVTDTTLDYLGREIDKL 753
>gi|341605713|gb|AEK82959.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605715|gb|AEK82960.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605717|gb|AEK82961.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605719|gb|AEK82962.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605755|gb|AEK82980.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605757|gb|AEK82981.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605759|gb|AEK82982.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605827|gb|AEK83016.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605829|gb|AEK83017.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEE 186
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 9/267 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLLVSS 63
I K G A+ + + + I PN + ++ A + + +F++ + + +
Sbjct: 70 ISACAKGGEWQRAMNMYHEMEAQGI-EPNEFTFAALITACEKGGQVSKAFEVFERM--QA 126
Query: 64 RTLSSDCYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R + + YT F A + D + L +EE++ ++ + I A K+ +
Sbjct: 127 RGIVGNVYT-FTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAAEAR 185
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + + K KPD+I Y+ V+ G+ G F MK G+ PD ++Y+TL+
Sbjct: 186 PALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPDVVAYSTLI 245
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++ L F+ M ++G++P+++ YT I + + G SL L MK ++R
Sbjct: 246 QAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRSLGLLERMKADKLR 305
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE 267
P Y +I L + G+ D +T+ +
Sbjct: 306 PDAVAYNFVISALSRGGQWDAGLTLLQ 332
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 3/255 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVASAET-NDIDLSFQILKDLLVSSRTLSS 68
K G VS A + + ++ + I + N Y ++S E D + ++L++++ +
Sbjct: 110 KGGQVSKAFEVFERMQARGI-VGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNL 168
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y+ A + L +E + IIV + ++ A K+ E A IF
Sbjct: 169 QAYSAAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQK 228
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+K PD++ Y+ ++ R G + L F M++AGV P+ I+Y + K
Sbjct: 229 MKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGE 288
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L M ++PD + Y +I + R G + L L +++ + +P+I Y +
Sbjct: 289 WRRSLGLLERMKADKLRPDAVAYNFVISALSRGGQWDAGLTLLQMLEEDEAQPNISTYCT 348
Query: 249 LIDNLKKMGKVDLAM 263
+I G+ + A+
Sbjct: 349 VIKACGDNGQWEKAL 363
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 77/164 (46%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A K Q+ KA +F+ ++ ++ T+ + ++G L M G
Sbjct: 104 LITACEKGGQVSKAFEVFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKG 163
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P+ +Y+ ++ K L M IKPD++ Y+A++ + G+ G E +
Sbjct: 164 IQPNLQAYSAAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAA 223
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
R+F MK++ + P + Y +LI ++ G+ A+ +F+ M +
Sbjct: 224 RIFQKMKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKA 267
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + I A AK + ++A+ ++ ++ +P+ T+ ++ + G+V+ F
Sbjct: 64 VTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFER 123
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ G+V + ++ +++ K+ L EM GI+P+L Y+A I + +
Sbjct: 124 MQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAAE 183
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+L L M ++I+P I VY +++ K G + A IF++M
Sbjct: 184 ARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMK 230
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 68/152 (44%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++AL + + + +P+L Y+ + + L M + PD I Y+ +
Sbjct: 150 QRALKLLEEMIAKGIQPNLQAYSAAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAV 209
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ K + F++M G+ PD++ Y+ LI ++ R G +L +F M++ +
Sbjct: 210 MAACGKAGLWEPAARIFQKMKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGV 269
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
RP++ Y I K G+ ++ + E M +
Sbjct: 270 RPNVIAYTEAIAACAKAGEWRRSLGLLERMKA 301
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFD---------HIKGLKCKPDLITYNIVLDILGRVGRV 154
+ N + A ++ + +AL +FD + +PD +T++ + + G
Sbjct: 20 VSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLRPDTVTFSTAISACAKGGEW 79
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+N + M+ G+ P+ ++ L+ K ++ F M GI ++ T+TA
Sbjct: 80 QRAMNMYHEMEAQGIEPNEFTFAALITACEKGGQVSKAFEVFERMQARGIVGNVYTFTAA 139
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I S + G+ + +L+L +M + I+P++ Y + I +K + A+ + E M
Sbjct: 140 ISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYSAAISACEKAAEARPALGLLERMT 195
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 6/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G V AA L + + PNA YN ++ + + +D + ++ +
Sbjct: 53 INGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAE--ARK 110
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R + D Y A + L ++ + +++ N II ++R++
Sbjct: 111 RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLAD 170
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL +F+ + P+L+TY++V+D L + ++++ M G PD ++Y L+
Sbjct: 171 ALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVL 230
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
RLD L R M G PD++TYT +ID + G ++++ +F ++ + P
Sbjct: 231 GFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSP 290
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y +LI + +VD + EM
Sbjct: 291 NVVTYSALIGGYCRASRVDEGGKVMREM 318
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 135/274 (49%), Gaps = 14/274 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSF----QIL 56
N ++ LCK + AA ++ R ++ F P+ YN ++ A + +D + Q+
Sbjct: 86 NALVDGLCKQDRLDAARAVIAEARKRD-FAPDVVTYNTLMAALFQLGRVDEALATFTQMT 144
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
++ V + + T RA + D L +F E + + P +++ + +I KS
Sbjct: 145 EEGYVPTLVSFNAIITGLCRARRLAD---ALEVFNEMIDRDFHP-NLVTYSVVIDGLCKS 200
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
Q+++A + D + C+PDL+ Y ++ GR++ L M G +PD ++Y
Sbjct: 201 DQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTY 260
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+++ L K+ R+D FRE+ + P+++TY+ALI + R ++E ++ M++
Sbjct: 261 TVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MRE 317
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
RP++ Y ++I L + + + A +F EM+
Sbjct: 318 MACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMS 351
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ K +++ A + + PD++TYN ++ L ++GRV++ L F M E
Sbjct: 86 NALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTE 145
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G VP +S+N ++ L + RRL L F EM + P+L+TY+ +ID ++ ++E
Sbjct: 146 EGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDE 205
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +L + M + RP + Y L+ G++D A+ + M S
Sbjct: 206 AQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVS 250
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF-ASMKEAGVVPDFISYNTLLNNLRKIR 187
++G++C T +I+L L R GRV L F AS++ A PD +SY TL+N L K+
Sbjct: 3 VEGMQCNDR--TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 188 RLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+D FR+M G +P+ TY AL+D + ++ + + + +++ P + Y
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMN 270
+L+ L ++G+VD A+ F +M
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMT 144
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDH-IKGLKCKPDLITYNIVLDILGRVGRVND 156
A P+ ++ +I K +++ A +F + C+P+ TYN ++D L + R++
Sbjct: 42 AQPD-VVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDA 100
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
A ++ PD ++YNTL+ L ++ R+D L F +M E G P L+++ A+I
Sbjct: 101 ARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIIT 160
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
R + ++L +FN+M + P++ Y +ID L K ++D A + + M S
Sbjct: 161 GLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 215
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC+A ++ A+ + + D++ F PN Y+ V+ +++ +D + Q+L
Sbjct: 156 NAIITGLCRARRLADALEVFNEMIDRD-FHPNLVTYSVVIDGLCKSDQLDEAQQLL---- 210
Query: 61 VSSRTLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
R +S C YT F L + +V ++ +I
Sbjct: 211 --DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLC 268
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K +++ A IF + KC P+++TY+ ++ R RV++ M+E P+ +
Sbjct: 269 KVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDE---GGKVMREMACRPNVV 325
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+YNT++ L + R + FREM E G PD TY L
Sbjct: 326 TYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK+ + A +LL + + P+ AY +++ + +D + +L+
Sbjct: 194 IDGLCKSDQLDEAQQLLDRMVSEGC-RPDLVAYTPLVLGFSAAGRLDSALGLLR------ 246
Query: 64 RTLSSDCYTNFARAFIMTDDCTQL-------LIFIEEVVQIASPESIIVVNRIIFAFAKS 116
R +S C + ++ D ++ IF E V SP +++ + +I + ++
Sbjct: 247 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSP-NVVTYSALIGGYCRA 305
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++++ + ++ + C+P+++TYN ++ L V R + F M E G VPD +Y
Sbjct: 306 SRVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362
Query: 177 NTLLNNLRKI 186
L LR I
Sbjct: 363 RGLKRALRMI 372
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 141/307 (45%), Gaps = 38/307 (12%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
YI LC+ + A ++ + ++ + LPN Y+ ++ +T ++ ++ + K++LV+
Sbjct: 240 YILDLCRDNKMEEAEKMFELMKKHGV-LPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVA 298
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + F + +V+ ++ V N +I KS + +A
Sbjct: 299 ELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEA 358
Query: 123 LLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEF------------------ 161
+ + ++ L PD+ TY I+++ I +V N + +
Sbjct: 359 VGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Query: 162 --------------ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ M +GV P+ I+++TL++ +R + + + EM GI PD
Sbjct: 419 YCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++TYTALID+ + N++E+LRL++DM + I P+ + + L+D K G++ +A+ ++
Sbjct: 479 VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ 538
Query: 268 EMNSSLS 274
E N S
Sbjct: 539 ENNQQRS 545
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 19/258 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--------CVLVASAETNDIDLSFQ 54
N I CK+GN+ AV LL + N+ P+ + C+ AE N + FQ
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLS-PDVFTYTILINGLCIEDQVAEANRL---FQ 398
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
+K+ + SS Y + + + Q L E+ +II + +I +
Sbjct: 399 KMKNERIFP---SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 115 KSRQIEKAL-LIFD-HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
R I+ A+ L F+ IKG+ PD++TY ++D + + + L ++ M EAG+ P+
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIV--PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++ L++ K RL + + +++E + + + +T LI+ + G I + R F+
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 233 DMKQQQIRPSIYVYRSLI 250
DM+ I P I Y S++
Sbjct: 574 DMRSCGITPDICSYVSML 591
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 89/179 (49%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++E+ + ++ + I + ++E+A +F+ +K P+L TY+ ++D +
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G V + + A ++P+ + + TL++ K R L F M + G+ P+L
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI ++GN+ E++ L ++M+ + P ++ Y LI+ L +V A +F++M
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 97 IASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
I SP+ SI V + +I F + E+AL + + +KC PD +L+ L R R +
Sbjct: 125 IQSPKFSIGVFSLLIMEFLEMGLFEEALWV---SREMKCSPDSKACLSILNGLVRRRRFD 181
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNL-------RKIRRLDLCLIYFREMGESGIKPDL 208
+ ++ M G+VPD Y L +K + LD EM GIKP++
Sbjct: 182 SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLD-------EMTSLGIKPNV 234
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
YT I R +EE+ ++F MK+ + P++Y Y ++ID K G V A +++E
Sbjct: 235 YIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKE 294
Query: 269 M 269
+
Sbjct: 295 I 295
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + L KP++ Y I + L R ++ + F MK+ GV+P+ +Y+ +++
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + ++E+ + + P+++ + L+D F + + + LF M + + P++Y
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
VY LI K G + A+ + EM S
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMES 367
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 49/274 (17%), Positives = 112/274 (40%), Gaps = 38/274 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC V+ A RL Q ++++ IF +A YN ++ + +++ + + ++ S
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 65 TLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ ++ + D + ++ E ++ P+ ++ +I A K +++AL
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD-VVTYTALIDAHFKEANMKEAL 499
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNE-------------------- 160
++ + P+ T+ ++D + GR++ D E
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Query: 161 ------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
F+ M+ G+ PD SY ++L + +R+ ++ +M ++GI P+L
Sbjct: 560 CQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL 619
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L L + G ++ + L N + + + S
Sbjct: 620 LVNQLLARFYQANGYVKSACFLTNSSRLKTVSNS 653
>gi|399107206|gb|AFP20367.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%)
Query: 48 DIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVN 107
DI + +IL + +S T + Y + + I+ + + P + N
Sbjct: 225 DIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFN 284
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
+I+ + +++A +F +K PD+ +Y+I++D R GRV+ F M+ +
Sbjct: 285 AVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS 344
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G++P+ SY+ L++ K R+D L F EM SGI PD+ +Y+ LID F R G+++ +
Sbjct: 345 GILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSA 404
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + +M PS + Y SLI K + A+ F M
Sbjct: 405 IKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM 446
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 78/132 (59%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
+N V+ L + G +++ F MK +G++PD SY+ L++ + R+D F+EM
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
SGI P++ +Y+ LID F + G ++++L +F +MK I P +Y Y LID + G +D
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402
Query: 261 LAMTIFEEMNSS 272
A+ +EEM S+
Sbjct: 403 SAIKFWEEMTSN 414
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 45/213 (21%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR-------VGRV 154
+I+ N ++ + +++ L+F+ + +P++ TY I+++ R + R
Sbjct: 170 NIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRA 229
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKI------RRL--DLC-------------L 193
+++L + + +G P+ ++Y T + L K+ RL +LC +
Sbjct: 230 SEILGK---IYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAV 286
Query: 194 IY--------------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
IY F+EM SGI PD+ +Y+ LID F R G ++++ +F +M+ I
Sbjct: 287 IYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGI 346
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+IY Y LID K G+VD A+ +FEEM +S
Sbjct: 347 LPNIYSYSILIDGFCKEGRVDKALEVFEEMKNS 379
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 126/274 (45%), Gaps = 6/274 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNI-FLPNAYNCVLVASAETNDIDLSFQILKDLL 60
CN + C+ + + A+ L + ++ + F P +YN + + + + Q+L +L
Sbjct: 458 CNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVML 517
Query: 61 VSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R + D Y+ F + + ++ ++ ++ ++ +I F +
Sbjct: 518 --KRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCK 575
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ A +F +K + PD I Y ++ G + F M G P+ ++Y
Sbjct: 576 MDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTC 635
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ- 237
+N K+ + + + +M E G+ PD + YT LI +F TG + + LF++MKQ+
Sbjct: 636 FINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEG 695
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P++ +Y LI++ K+ K D A ++EEM +
Sbjct: 696 RCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRA 729
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 122/269 (45%), Gaps = 9/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVA----SAETNDIDLSFQILKDLL 60
I+ C+ G++ +A++ + + N F P+A+N C L+ S + + F+I++ L
Sbjct: 392 IDGFCRKGDMDSAIKFWEEMTSNN-FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLG 450
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T++ + + + D + L E+ + + N I + E
Sbjct: 451 MWPDTIACN---HILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPE 507
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL + + PD++ Y+ ++ + + F M + G+ + +Y L+
Sbjct: 508 KALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILI 567
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N ++D+ F+ M ES + PD + YT+L+ F TG + + LF++M ++
Sbjct: 568 NLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCS 627
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y I+ K+ K + A ++E+M
Sbjct: 628 PNVVTYTCFINEYLKLNKNNQAHKLYEKM 656
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 36/238 (15%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSS 63
YI+ LCK G A RL+Q+L KN L N +N V+ + +D + ++ K++ S
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 310
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
I+ D + + +I F + ++++A
Sbjct: 311 ---------------ILPD--------------------VYSYSILIDGFCRKGRVDQAS 335
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ P++ +Y+I++D + GRV+ L F MK +G++PD SY+ L++
Sbjct: 336 EVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGF 395
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ +D + ++ EM + P Y +LI + ++ +L+ F M++ + P
Sbjct: 396 CRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWP 453
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
D+ N+V D+L +V N ML F K+ G+ + +S N LL L + R+D
Sbjct: 131 DVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGV 190
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGR----TGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ F + + G +P++ TYT +++ F R + +I + + + P++ Y +
Sbjct: 191 RLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 250
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
I L K+G +A + + +
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNL 271
>gi|399107190|gb|AFP20359.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + I Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|260780324|gb|ACX50708.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780342|gb|ACX50717.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780358|gb|ACX50725.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780388|gb|ACX50740.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVY 246
ALID+ + G ++E++ LF M++++ ++Y Y
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTY 196
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|260766045|gb|ACX50053.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 187
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 7 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 66
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 67 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 126
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 127 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 171
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 29 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 88
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 89 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 148
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVY 246
ALID+ + G ++E++ LF M++++ ++Y Y
Sbjct: 149 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTY 184
>gi|224140601|ref|XP_002323670.1| predicted protein [Populus trichocarpa]
gi|222868300|gb|EEF05431.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 114/237 (48%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
+N VL+A N+ DL ++ L S +S ++ R D + +++++
Sbjct: 144 FNDVLMALVTANESDLVLKLYSGLSCYSLEPNSWTFSIMVRCHCKKKDPGEAKRVLDQMM 203
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q ++ + +I +F K Q++ +F+ + + CKP++ TYN +L + VGR++
Sbjct: 204 QKGFNPNVATLTILINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCYVGRID 263
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ +K+ V PD +Y +++ K+ R D + E E G+ P+++T+ L+
Sbjct: 264 EAFELMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLL 323
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
D + + G + + MKQ++ P Y +L+ L GKV + IF EM S
Sbjct: 324 DGYAKEGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGLLLWGKVLAGLRIFNEMEGS 380
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 43/271 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G + ++ + + D+ PN YNC+L ID +F++++D +
Sbjct: 218 INSFCKMGQLQNTFQVFEVM-DRIGCKPNIQTYNCLLKGMCYVGRIDEAFELMED--IKK 274
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T+ D YT A M D F K + ++A+
Sbjct: 275 TTVEPDIYTYTA----MMD-----------------------------GFCKVGRSDEAM 301
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + P+++T+N +LD + GR MK+ +PD+ISY+TLL+ L
Sbjct: 302 ELLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGL 361
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN-----IEESLRLFNDMKQQQ 238
++ L F EM SG++ D +L+ R +E + +F MK++
Sbjct: 362 LLWGKVLAGLRIFNEMEGSGLEADERLMNSLVRGLCRKSIKENDLVEVAYEVFEKMKKRG 421
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I L KVD A +M
Sbjct: 422 FVIEQSTYALVIQALWVAKKVDDAFINLHQM 452
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I CK G + AV + ++ + LPNA N +L+ E + + ++ +++
Sbjct: 29 NVLIRGFCKGGQMHQAVSVFSDMKSSGL-LPNASTMNTLLLGLCEIGQMSSALKLFREMQ 87
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S + R F M + F +E+ + + ++ A + S ++
Sbjct: 88 AGPFLPTSASHNILLRGFFMAGRAIE---FFKEMKASGVEPDLESYHILLSALSDSGRMA 144
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + C PD++TYN+++D ++G+ + + + +AG P+ +Y+ ++
Sbjct: 145 EAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIII 201
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K+ +++ F +M ES P+ +T+ LI F + G +E++++LF +M++ +
Sbjct: 202 NCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK 261
Query: 241 PSIYVYRSLIDNL-KKMGKVDLAMTIFEEMNSS 272
+I Y +LID+L KK G V A+ +F ++ +
Sbjct: 262 ATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 294
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 7/184 (3%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F++ + P ++ N +I F K+ +E A+ +F ++ + CK ++TYN ++D L
Sbjct: 216 VFMKMIESNCVPNAV-TFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 274
Query: 149 GRV-GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ G V ++ F ++ AG+ P ++YN+L+ + R + L M G KPD
Sbjct: 275 CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPD 332
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++TY LI +E++ RLFN M P++ + LI L KV+ A I +
Sbjct: 333 VITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 389
Query: 268 EMNS 271
M +
Sbjct: 390 RMTA 393
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+R+ ++AL +F + P+ TYN+++ + G+++ ++ F+ MK +G++P+ +
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
NTLL L +I ++ L FREM P ++ L+ F G ++ F +MK
Sbjct: 63 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMK 119
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P + Y L+ L G++ A +F M S
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS 156
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 114/283 (40%), Gaps = 34/283 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G A L++ + K + PN Y+ ++ + + ++ ++++ ++
Sbjct: 163 NVLMDGYCKIGQTYEAQSLMKEIL-KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 221
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ-I 119
S+ ++ + F + E+ +I +I+ N +I + K R +
Sbjct: 222 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 281
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A+ +F+ ++G P ++TYN + I G R ND L M G PD I+YN L
Sbjct: 282 YTAVDLFNKLEGAGLTPTIVTYNSL--IQGFSERANDGLRLLCHMHAEGCKPDVITYNCL 339
Query: 180 LNNLRKIRRLDLCLIYFREMG----------------------------ESGIKPDLLTY 211
++ L R++ F M + PD+ T+
Sbjct: 340 ISGLCSANRVEDAQRLFNGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMTTF 399
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+I +F + G + ++ + DM + P+ Y +L ++
Sbjct: 400 NTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQ 442
>gi|260765969|gb|ACX50015.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765971|gb|ACX50016.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765973|gb|ACX50017.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765975|gb|ACX50018.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765977|gb|ACX50019.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765979|gb|ACX50020.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765981|gb|ACX50021.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765983|gb|ACX50022.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765985|gb|ACX50023.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765987|gb|ACX50024.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765989|gb|ACX50025.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765991|gb|ACX50026.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765993|gb|ACX50027.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765995|gb|ACX50028.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765997|gb|ACX50029.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765999|gb|ACX50030.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766001|gb|ACX50031.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766003|gb|ACX50032.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766005|gb|ACX50033.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766007|gb|ACX50034.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766009|gb|ACX50035.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766011|gb|ACX50036.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766013|gb|ACX50037.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766015|gb|ACX50038.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766017|gb|ACX50039.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766019|gb|ACX50040.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766021|gb|ACX50041.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766023|gb|ACX50042.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766025|gb|ACX50043.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766027|gb|ACX50044.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766029|gb|ACX50045.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766031|gb|ACX50046.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766033|gb|ACX50047.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766035|gb|ACX50048.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766037|gb|ACX50049.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766039|gb|ACX50050.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766041|gb|ACX50051.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766043|gb|ACX50052.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766047|gb|ACX50054.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766049|gb|ACX50055.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780310|gb|ACX50701.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780312|gb|ACX50702.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780318|gb|ACX50705.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780330|gb|ACX50711.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780332|gb|ACX50712.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780338|gb|ACX50715.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780340|gb|ACX50716.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780344|gb|ACX50718.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780346|gb|ACX50719.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780348|gb|ACX50720.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780394|gb|ACX50743.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780396|gb|ACX50744.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780398|gb|ACX50745.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780400|gb|ACX50746.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780402|gb|ACX50747.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780404|gb|ACX50748.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780406|gb|ACX50749.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780408|gb|ACX50750.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780410|gb|ACX50751.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780412|gb|ACX50752.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780414|gb|ACX50753.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780416|gb|ACX50754.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780418|gb|ACX50755.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780420|gb|ACX50756.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780422|gb|ACX50757.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780424|gb|ACX50758.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVY 246
ALID+ + G ++E++ LF M++++ ++Y Y
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTY 196
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 136/350 (38%), Gaps = 86/350 (24%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVL-------------------- 40
N ++ LCKAG V A+ L++LR F+ Y+C++
Sbjct: 283 NAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVL 342
Query: 41 ----------------VASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDC 84
AE ID +F ++ T + CY +A + D
Sbjct: 343 EQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDL 402
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
+ E+ Q +I K + +++A+ +FD + + C P ++TYN++
Sbjct: 403 DGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVL 462
Query: 145 LDILGRVGRVNDMLNEFASMK--------------------------------------- 165
+D L R R+ + F M+
Sbjct: 463 IDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLK 522
Query: 166 ---------EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
++GVVPD ++YNTLLN L K+R LD L FRE+ G D +TY LID
Sbjct: 523 AYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLID 582
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
S R +++ LF D+ PS+ +Y S++ +L +M K+ A+ +
Sbjct: 583 SLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFW 632
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 2/176 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKG-LKCKPDLITYNIVLDILGRVGRVNDM-LNEFASMKE 166
+IFA A + + +A+ F ++G C+P YN VL +L G V + L + M
Sbjct: 143 LIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVA 202
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
AG +P+ +YN L++ L K L F EM + GI P++ T+T L+ S G ++E
Sbjct: 203 AGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKE 262
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+ L N M+ + P Y + + L K G+VD A+ E + + + + G K +
Sbjct: 263 AENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGY 318
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 113/247 (45%), Gaps = 16/247 (6%)
Query: 31 FLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDD------C 84
F+ NA VLVAS + L+ +R +++ C N A ++ D
Sbjct: 174 FVYNAVLRVLVASGGVVPLALALY--------NRMVAAGCLPNRATYNVLMDGLCKRGTA 225
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
L +E++Q ++ ++ + + Q+++A + + ++ C PD +TYN
Sbjct: 226 VDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAF 285
Query: 145 LDILGRVGRVNDMLNEFASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCL-IYFREMGES 202
L L + GRV++ + +++ G V Y+ L++ L R + Y + ++
Sbjct: 286 LSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQA 345
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
PD++ YT +I G I+++ F++MK+++ P + Y +L+ L G +D A
Sbjct: 346 DFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGA 405
Query: 263 MTIFEEM 269
++ EM
Sbjct: 406 RSLMSEM 412
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD++ Y I++ GR++D F MKE PD YNTLL L LD
Sbjct: 349 PDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSL 408
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
EM ++ + D T+T +I + ++E++++F+ M + P++ Y LID L +
Sbjct: 409 MSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYR 468
Query: 256 MGKVDLAMTIFEEM 269
+++ A +F +M
Sbjct: 469 AHRLEEARMLFYKM 482
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N ++ LC +G++ A L+ + N+ L N + ++ + +D + Q+ ++
Sbjct: 390 NTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMV- 448
Query: 62 SSRTLSSDCYTNFARAFIMTD--------DCTQLLIFIEEVV--------------QIAS 99
C+ ++ D + ++L + EV Q+
Sbjct: 449 -----EVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKD 503
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
ES+ +++ + +S Q+ KA + I PD++TYN +L+ L +V ++ L
Sbjct: 504 SESL---QKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALR 560
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F ++ G D I+Y TL+++L + R + + F+++ G P L Y +++ S
Sbjct: 561 LFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLC 620
Query: 220 RTGNIEESLRLFND 233
R + +++ + D
Sbjct: 621 RMNKLSQAINFWFD 634
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ +C++G V A +LL+ + D + +P+ YN +L + ++D + ++ ++L V
Sbjct: 511 VDSMCQSGQVLKAYKLLRGIMDSGV-VPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG 569
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+L Y + + + ++++ I S+ + N I+ + + ++ +A+
Sbjct: 570 FSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAI 629
Query: 124 -LIFDHIKGLKCKPDLITYNIVL--DILGRV------GRVNDMLNEFASM-KEAGVVPDF 173
FDH+ L YN+ +++ G +++ + E + +E G V +
Sbjct: 630 NFWFDHL--------LKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSV-NS 680
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
Y L L + RR+D L F + ESGI
Sbjct: 681 CPYTIWLIGLIQARRIDDALKIFHILEESGI 711
>gi|341605763|gb|AEK82984.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRMEEE 186
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + I Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALXKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|341605765|gb|AEK82985.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605767|gb|AEK82986.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605769|gb|AEK82987.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605771|gb|AEK82988.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEE 186
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + I Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 84 CTQLLIFIEEVVQIASPESIIVVNRIIF----------------AFAKSRQIEKALLIFD 127
C LL +E + E I+VV R IF A ++ +I+KA
Sbjct: 3 CNALLDLLERARR---SEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIA 59
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ K PD+ TYN+V+D L + R++ + F +M E PD ++YNTLL L K
Sbjct: 60 EMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNG 115
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R+ F M +GI P +TYT LID F + E + L M ++ P++Y Y
Sbjct: 116 RVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYC 175
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPK 280
S+I+ L K KVD A +FEEM LAG K
Sbjct: 176 SIINGLCKNRKVDQAYQLFEEMK-----LAGCK 203
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
A PE++I+ I + R ++A + + P+++TY LG
Sbjct: 304 ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRA 363
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
EF M E G+ PD ++YN L++ K RLD+ R M +SG+ P+++TY L+
Sbjct: 364 YREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGH 423
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
R G +E L + M + +P + + +L+ L +G+ D A +
Sbjct: 424 HCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFL 472
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S + +I F K Q E A + + KC P + +Y +++ L + +V+ F
Sbjct: 135 SDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLF 194
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK AG PD ++YNTL++ L +RL M E+G +PD +T+TALI+ T
Sbjct: 195 EEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTT 254
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
I+E+ LF M +Q P + + L+ L + K+ A+++
Sbjct: 255 DRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV 298
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 45/252 (17%)
Query: 59 LLVSSRTLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
++V R S DC Y +A T + I E+ + + N +I
Sbjct: 20 VVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDT 79
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K+R+I +A+ F+ + +PD++TYN +L L + GRV + F SM+ AG+ P
Sbjct: 80 LCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPS 135
Query: 173 FISYNTLL-----------------------------------NNLRKIRRLDLCLIYFR 197
++Y TL+ N L K R++D F
Sbjct: 136 DVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFE 195
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM +G KPD +TY LI + E+ L M + +P + +LI+ L
Sbjct: 196 EMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTD 255
Query: 258 KVDLAMTIFEEM 269
++ A +F+ M
Sbjct: 256 RIKEAFVLFQGM 267
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 128/338 (37%), Gaps = 71/338 (21%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ LCKA +S A+ +++ + ++ YN +L + + + + + +
Sbjct: 74 NVVIDTLCKARRISRAIEFFETMPEPDVV---TYNTLLGGLCKNGRVAQACSLFGSMEGA 130
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
T S YT F ++ + ++ II K+R++++A
Sbjct: 131 GITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQA 190
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNE------------------- 160
+F+ +K CKPD +TYN ++ L R+ D+L
Sbjct: 191 YQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEG 250
Query: 161 -------------FASMKEAGVVPDFISYNTLLNNLRKIRRL--------------DLCL 193
F M + G PD +++ L++ L +R+L + +
Sbjct: 251 LCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVI 310
Query: 194 IY---FREMGES----------------GIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y FRE+G G+ P+++TYTA G + R F M
Sbjct: 311 LYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRM 370
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Q I P + Y L+D K ++D+A + M+ S
Sbjct: 371 LEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQS 408
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 118/301 (39%), Gaps = 36/301 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
I+ CK A LLQ + + P Y+ C ++ + +D ++Q+ +++ ++
Sbjct: 143 IDVFCKMCQFETAYGLLQLMASRKCS-PTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 201
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + + +V+ I +I + +I++A
Sbjct: 202 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAF 261
Query: 124 LIFDHIKGLKCKPDLITYNIV---LDILGRVGRVNDMLNEFASMKEA------------- 167
++F + C PDL+T+ ++ L IL ++ ++ + + EA
Sbjct: 262 VLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGR 321
Query: 168 -----------------GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GV P+ ++Y L + FR M E GI+PD++
Sbjct: 322 RRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 381
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y L+D F + ++ + ++ M Q + P+I Y +L+ + + GKV+ + M
Sbjct: 382 YNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 441
Query: 271 S 271
S
Sbjct: 442 S 442
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%)
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++ N LL+ L + RR + ++ FR + KP+ L+Y L+ + RTG I+++ +
Sbjct: 1 VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M ++++ P ++ Y +ID L K ++ A+ FE M
Sbjct: 61 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM 96
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 98/174 (56%), Gaps = 1/174 (0%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q+ +P ++ N +I K ++ +A +F +K + C PD++T+N ++D G+ G ++
Sbjct: 182 QLPAP-NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ M+ +G D ++YN L+N K R++ YF M G+ +++T++ +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D+F + G + E+++LF M+ + + + + Y LID K G++D A+ + +EM
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 135/270 (50%), Gaps = 9/270 (3%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+++ CK G V A++L +R + + L Y C++ + + +D + +L +++
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKSRQI 119
L+ YT + E+V+++ + ++ +I ++
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAE----AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKAL + +K + D+ Y ++ L V ++++ + M E+G+ P++I Y T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K ++ + +++ +SG +P+++TY ALID + G+I+E++ FN M+ +
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +L+D L K G ++ A+ +F EM
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEM 564
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 89/170 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I + K ++++ + + ++ CK D++TYN +++ + GR+ FA
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+MK GV+ + ++++T ++ K + + F +M G+ + TYT LID + G
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+++++ L ++M +Q + ++ Y L+D L K KV A + M +
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 14 NVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT 72
N A+ LL +++K + L + Y ++ + +D + +L + S + YT
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
A + + + +++++ ++I +I K+ I++A+ F+ ++ L
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
P++ Y ++D L + G +N+ + F M G+ D + Y LL+ K L
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+M +SG++ DL YT I F + E+ +F++M I P VY LI
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 253 LKKMGKVDLAMTIFEEMNSSL 273
+K+G ++ A+++ +EM L
Sbjct: 653 YQKLGNLEEAISLQDEMERVL 673
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G ++ A L +++ LP+ +N ++ + ++D Q+++++
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGC-LPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y F + + + +++ + + AF K +
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F ++ + TY ++D + GR++D + M GV + ++Y L+
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R++ R M ++G++ + L YT LI N E++L L ++MK + +
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I +Y +LI L + K+D A ++ +M+ S
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+ +L +L G ++D + A ++E V P+ + N +L L + R L R + E
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRL----VRRLFE 181
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
P++ T+ +ID + G + E+ LF+ MK+ P + + SLID K G++D
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 262 AMTIFEEMNSS 272
+ EEM S
Sbjct: 242 VEQLVEEMRRS 252
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK G +AVR+L + +K PN Y+ +L + D + +L +L
Sbjct: 355 MHGLCKLGRFGSAVRMLDEMEEKGCA-PNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKG 413
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+++S Y A Q ++E+ I N +I+ + +E+A
Sbjct: 414 FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAE 473
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF ++ + ITYN ++ L R GR + L + M G D ISYN L+ L
Sbjct: 474 HIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +D + EM GIKP+ +Y LI+ + G + ++L L +M Q + P I
Sbjct: 534 CKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 593
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L K+G A+ + E++
Sbjct: 594 VTYNTLINGLCKVGWTHAALNLLEKL 619
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 3/252 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I LCK G + A RL+Q ++ + P+ YN ++ + ++ + I ++L+
Sbjct: 422 NGIIYALCKDGKLDQATRLVQEMKSQGCK-PDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y A + + L E++ +I N +I A K ++
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+++ + + + KP+ +YN++++ L + G+V D L M G+ PD ++YNTL+
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K+ L ++ + PD++TY LI + ++++ L + I
Sbjct: 601 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIV 660
Query: 241 PSIYVYRSLIDN 252
P+ + ++ N
Sbjct: 661 PNERTWGMMVQN 672
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Query: 100 PE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
PE +++++N +I ++ +A +++ + C PD+ TY+I++ L ++GR +
Sbjct: 309 PEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAV 368
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M+E G P+ ++Y+TLL++ + D +M G + Y +I +
Sbjct: 369 RMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYAL 428
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G ++++ RL +MK Q +P I Y ++I +L ++ A IF +
Sbjct: 429 CKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 31/232 (13%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y A + + + ++E++ + + N ++ ++ +A + D +
Sbjct: 215 YQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMM 274
Query: 131 GLKCKPDLITYNIVLD-------------ILGRVGRVND-MLNE---------------- 160
C P ++TY +L +LGR+ VN MLN
Sbjct: 275 TQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATE 334
Query: 161 -FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M G PD +Y+ L++ L K+ R + EM E G P+++TY+ L+ SF
Sbjct: 335 LYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC 394
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
R G +++ + + M + + Y +I L K GK+D A + +EM S
Sbjct: 395 RNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKS 446
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 92/227 (40%), Gaps = 33/227 (14%)
Query: 75 ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKC 134
ARA L + + + ++ +I A + +A ++ D + + C
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243
Query: 135 KPDLITYN-IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD--- 190
D+ T+N +VL + G +GRV + M G +P ++Y LL L + R+ D
Sbjct: 244 AADVNTFNDLVLGLCG-LGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC 302
Query: 191 -------------------LCLI---------YFREMGESGIKPDLLTYTALIDSFGRTG 222
CL + MG G PD+ TY+ L+ + G
Sbjct: 303 AMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLG 362
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++R+ ++M+++ P+I Y +L+ + + G D A + ++M
Sbjct: 363 RFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 409
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ A++ ALL++ + + P T+ + L R+GR D L M
Sbjct: 146 NVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMAR 205
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G VPD + Y T+++ L + + EM G D+ T+ L+ G + E
Sbjct: 206 HGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVRE 265
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ RL + M Q PS+ Y L+ L + + D A +
Sbjct: 266 AARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML 305
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 1/150 (0%)
Query: 121 KALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+AL + D + + P +YN+VL L R D L + M V P ++
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L ++ R L R M G PD + Y +I + G + E+ L ++M
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + L+ L +G+V A + + M
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRM 273
>gi|399107196|gb|AFP20362.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 81 IBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 127/259 (49%), Gaps = 7/259 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I++ CK G + A +L + K + L NA YNC++ A + + + + D+ SS
Sbjct: 449 IDRFCKEGRLEEARNVLDEMSGKGLAL-NAVGYNCLISALCKDEKVQDALNMFGDM--SS 505
Query: 64 RTLSSDCYTNFARAFIM--TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ D +T + F + + + L ++++ + I N +I AF + +++
Sbjct: 506 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 565
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL + + + C D ITYN ++ L R G + L F M G+ P+ IS N L+N
Sbjct: 566 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 625
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + + L + R+M G+ PD++TY +LI+ +TG +E+L LF+ ++ + I P
Sbjct: 626 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 685
Query: 242 SIYVYRSLIDNLKKMGKVD 260
Y +LI K G D
Sbjct: 686 DAITYNTLISWHCKEGMFD 704
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N I LCK V A+ + + K +IF +N ++ + N + + + +D
Sbjct: 481 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIF---TFNSLIFGLCKVNKFEEALGLYQD 537
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L+ ++ Y AF+ + L + +++ P I N +I A ++
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 597
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
IEK L +F+ + P+ I+ NI+++ L R G + L M G+ PD ++YN+
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K R L F ++ GI PD +TY LI + G +++ L +
Sbjct: 658 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 717
Query: 239 IRPSIYVYRSLIDNLKKMG 257
P+ + L+ N K G
Sbjct: 718 FIPNEVTWYILVSNFIKEG 736
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A K +++ AL +F + CKPD+ T+N ++ L +V + + L + M
Sbjct: 481 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 540
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV+ + I+YNTL++ + + L +M G D +TY LI + R GNIE+
Sbjct: 541 EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 600
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L LF DM + + P+ LI+ L + G + A+ +M
Sbjct: 601 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 643
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ E ++ + I N +I K + A + + ++ C+P++ITY I++D
Sbjct: 393 VMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRF 452
Query: 149 GRVGR-----------------------------------VNDMLNEFASMKEAGVVPDF 173
+ GR V D LN F M G PD
Sbjct: 453 CKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 512
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++N+L+ L K+ + + L +++M G+ + +TY LI +F R G ++E+L+L ND
Sbjct: 513 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 572
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + Y LI L + G ++ + +FE+M S
Sbjct: 573 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 610
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 113/269 (42%), Gaps = 32/269 (11%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+ V+ A N++D + +LKD+ ++ Y A ++L +EE+
Sbjct: 237 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEM 296
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ + + N I K +I +A + D + P+ TY +++ L R+G+V
Sbjct: 297 LLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKV 356
Query: 155 ------------------NDMLNEFAS--------------MKEAGVVPDFISYNTLLNN 182
N ++N + S M G PD +YNTL+
Sbjct: 357 DEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K L EM G +P+++TYT LID F + G +EE+ + ++M + + +
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L K KV A+ +F +M+S
Sbjct: 477 AVGYNCLISALCKDEKVQDALNMFGDMSS 505
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P + T+ +V+ L V V+ M G VP+ I Y TL++ L K+ R++ L
Sbjct: 233 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKL 292
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
EM G PD+ T+ I + I E+ +L + M + P+ + Y L+ L +
Sbjct: 293 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 352
Query: 256 MGKVDLA 262
MGKVD A
Sbjct: 353 MGKVDEA 359
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P F SYN +L+ L + F EM GI P + T+ ++ + ++ + L
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
DM + P+ VY++LI L K+G+V+
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVN 287
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 7/263 (2%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G + A RLL + + P+ YN ++ ++ ++ + L L + R L D
Sbjct: 398 GRIEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGKMEEASTYL--LEIQGRGLKPDA 454
Query: 71 YT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
T F + T T+ + +E++ + + +I K+ + +AL IF H
Sbjct: 455 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 514
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ L PD+ T + + L + GRV + L F+ +KE G+VPD +Y++L++ K
Sbjct: 515 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 574
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ EM GI P++ Y AL+D ++G+I+ + +LF+ M ++ + P Y +
Sbjct: 575 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 634
Query: 249 LIDNLKKMGKVDLAMTIFEEMNS 271
+ID K V A ++F EM S
Sbjct: 635 MIDGYCKSENVAEAFSLFHEMPS 657
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 15/258 (5%)
Query: 22 LQSLRDKNIFLPNAYNCVLVASA-----ETNDIDLSFQILKDLLVSSRTLSSDCYTNFAR 76
L+S+ +K + +PN Y ++ + N+ L+F+ ++ + + +
Sbjct: 197 LRSMGEKGL-VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK---TGLKPDYNACSALID 252
Query: 77 AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP 136
F+ D ++L + +V P ++I N +I K ++EKA I + L CKP
Sbjct: 253 GFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP 312
Query: 137 DLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
+ T+ ++++ R +GR ++L+E M++ +VP +SY ++N L + L L
Sbjct: 313 NSRTFCLLIEGYCREHNMGRALELLDE---MEKRNLVPSAVSYGAMINGLCHCKDLSLAN 369
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+M SG+KP+++ Y+ LI + G IEE+ RL + M + P I+ Y ++I L
Sbjct: 370 KLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 429
Query: 254 KKMGKVDLAMTIFEEMNS 271
K GK++ A T E+
Sbjct: 430 SKAGKMEEASTYLLEIQG 447
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLL 60
N I LCK G + A +L+ + PN+ C+L+ +++ + ++L ++
Sbjct: 283 NVLIHGLCKFGKMEKAAEILKGMITLGC-KPNSRTFCLLIEGYCREHNMGRALELLDEME 341
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ S+ Y D + +E++ +++V + +I +A +IE
Sbjct: 342 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 401
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D + PD+ YN ++ L + G++ + ++ G+ PD +++ +
Sbjct: 402 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 461
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K ++ YF EM + G+ P+ YT LI+ + GN+ E+L +F + +
Sbjct: 462 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 521
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + + I L K G+V A+ +F E+
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSEL 550
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 8/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
+I K G ++ A + + D + +PN Y ++ + ++ + I + L
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLDHGL-MPNNPLYTVLINGHFKAGNLMEALSIFRHLH 516
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ F + + L E+ + + + +I F K ++E
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 576
Query: 121 KALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
KA + D +KG+ P++ YN ++D L + G + F M E G+ PD ++Y+T
Sbjct: 577 KAFELHDEMCLKGIA--PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 634
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K + F EM G++P Y AL+ + G++E+++ LF +M Q+
Sbjct: 635 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + +LID K K+ A +F+EM
Sbjct: 695 FATTL-SFNTLIDGYCKSCKIQEASQLFQEM 724
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 133/306 (43%), Gaps = 39/306 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK+G++ A +L + +K + P++ Y+ ++ ++ ++ +F + ++
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMPEKGL-EPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y D + + E++Q + + N +I + KS +I+
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQ 715
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + + PD +TY V+D + G++ + F M+E ++ D ++Y +L+
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL------------ 228
K+ + F +M G+KPD +TY +I + + N+ E+
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835
Query: 229 -----------------------RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
+L ++M + ++PS+ +L+ + + GK+D A +
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895
Query: 266 FEEMNS 271
FE + S
Sbjct: 896 FEGVKS 901
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLL 60
C+ I+ + G++ +R+ + I + YN ++ + ++ + +ILK ++
Sbjct: 247 CSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI 306
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S + + + + L ++E+ + S + +I + +
Sbjct: 307 TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLS 366
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + + + KP+++ Y+ ++ GR+ + M +GV PD YN ++
Sbjct: 367 LANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 426
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K +++ Y E+ G+KPD +T+ A I + +TG + E+ + F++M +
Sbjct: 427 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 486
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ +Y LI+ K G + A++IF +++
Sbjct: 487 PNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 27/199 (13%)
Query: 94 VVQIASPESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
VQ+ + E + N ++ ++ S ++ L F + G + ++I++D
Sbjct: 111 AVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGG----SSPVVFDILIDSY 166
Query: 149 GRVGRVNDMLNEF------------------ASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
R+G +++ N F SM E G+VP+ +Y + L + +R++
Sbjct: 167 KRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMN 226
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F EM ++G+KPD +ALID F R G+I+E LR+ + M I ++ Y LI
Sbjct: 227 EAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 286
Query: 251 DNLKKMGKVDLAMTIFEEM 269
L K GK++ A I + M
Sbjct: 287 HGLCKFGKMEKAAEILKGM 305
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 84/164 (51%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I +++++ +A L F+ ++ KPD + ++D R G ++++L M G
Sbjct: 215 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 274
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ + I+YN L++ L K +++ + M G KP+ T+ LI+ + R N+ +L
Sbjct: 275 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 334
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L ++M+++ + PS Y ++I+ L + LA + E+M S
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 378
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 123/286 (43%), Gaps = 43/286 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVS- 62
I+ CK+ NV+ A L + K + P++ YN ++ + D++ + + +++L
Sbjct: 636 IDGYCKSENVAEAFSLFHEMPSKGV-QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Query: 63 -SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ TLS + + + +QL F E + + P+ + +I K+ ++E+
Sbjct: 695 FATTLSFNTLIDGYCKSCKIQEASQL--FQEMIAKQIMPDHVTYTT-VIDWHCKAGKMEE 751
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL- 180
A L+F ++ D +TY ++ ++G+ +++ F M GV PD ++Y ++
Sbjct: 752 ANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIY 811
Query: 181 -----NNLRKIRRL----------------DLCLI-------------YFREMGESGIKP 206
+NL + +L DL + EMGE G+KP
Sbjct: 812 AHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKP 871
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L + L+ SF G ++E+ R+F +K + P L++
Sbjct: 872 SLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC+ G V + + + +R+ + + Y ++ A E+ + + ++
Sbjct: 46 IHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGC 105
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT A + ++E+V+ S+ N +I + K +E A
Sbjct: 106 EPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQE 165
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
I D + C P+ TYN ++ R V+ + + M E+ + P ++YN+L++
Sbjct: 166 ILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQC 225
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
KI LD M E+G+ PD TY+ ID+ + G IEE+ LFN +K++ I+ +
Sbjct: 226 KIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y +LID K GK+D A ++ + M
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRM 310
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 125/271 (46%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ L ++G A+ L +R++ PN Y ++ A + ++ +IL +++
Sbjct: 81 VHALFESGRRMEAINLFSEMRERGC-EPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-FIEEVVQIASPESI----IVVNRIIFAFAKSRQ 118
S Y + C + ++ +E++ + S N +I F + +
Sbjct: 140 LVPSVPTYNALIDGY-----CKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKN 194
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A+ + + + P ++TYN ++ ++G ++ M E GVVPD +Y+
Sbjct: 195 VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L K R++ + F + E GIK + + YTALID + + G ++++ L + M +
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y +LID L K KV A+ + E M
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESM 345
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 84/154 (54%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A +F+ + C+ + ++Y ++ L VGRV++ +N F M+E P +Y
Sbjct: 20 VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L + R + F EM E G +P++ TYT +I++ + +EE R+ ++M ++
Sbjct: 80 IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ PS+ Y +LID K G V+ A I + M+S+
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSN 173
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CK + R+L + +K + +P+ YN ++ + ++ + +IL + +S
Sbjct: 116 INAMCKETKLEEGRRILDEMVEKGL-VPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F + + + + ++++ S++ N +I K ++ A
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + PD TY++ +D L + GR+ + F S+KE G+ + + Y L++
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D M P+ TY ALID + ++E+L L M Q+ ++ ++
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV 354
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y LI + K G D A I ++M SS
Sbjct: 355 PTYTILIVAMLKEGDFDYAHRILDQMVSS 383
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + ++++ + IF ++ C P + TY +++ L GR + +N F+ M+E G
Sbjct: 45 LIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERG 104
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ +Y ++N + K +L+ EM E G+ P + TY ALID + + G +E +
Sbjct: 105 CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQ 164
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M P+ Y LI + V AM + +M
Sbjct: 165 EILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 116/296 (39%), Gaps = 30/296 (10%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSS 63
+I+ LCK G + A L SL++K I Y ++ + +D + +L +L
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+S Y + L+ +E ++Q ++ +I A K + A
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I D + +PD+ Y + G + + + + M E GV+PD ++Y +++
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS-----------------------FGR 220
+ L+ + M ++G P TY+ LI F
Sbjct: 435 GGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFAD 494
Query: 221 TGNI------EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ E +L LF M + P+I Y LI L K+G++ +A +F+ MN
Sbjct: 495 VADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMN 550
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 13/274 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK G V AA +L L N PN YN ++ ++ + +L +L
Sbjct: 148 NALIDGYCKEGMVEAAQEILD-LMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKML 206
Query: 61 VSSRTLSSDCYTNFARA---FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S T S Y + D +LL + E + + V I K
Sbjct: 207 ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV---FIDTLCKKG 263
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+IE+A ++F+ +K K + + Y ++D + G+++D + M +P+ +YN
Sbjct: 264 RIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYN 323
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L K R++ L+ M + G+K + TYT LI + + G+ + + R+ + M
Sbjct: 324 ALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS 383
Query: 238 QIRPSIYVYRSLIDNLKKMGKV----DLAMTIFE 267
+P +Y+Y + I G + D+ +FE
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE 417
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CKAG + A LL + ++ LPN+ YN ++ + + + +++ ++
Sbjct: 291 IDGYCKAGKMDDANSLLDRMLTEDC-LPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT A + D ++++V + + I AF I++A
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD +TY +V+D G +G +N + M + G P +Y+ L+ +L
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469
Query: 184 ------RKIRRLDLC-----------------------LIYFREMGESGIKPDLLTYTAL 214
+K + + LC L F +M E G P++ TY L
Sbjct: 470 LKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKL 529
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
I + G + + +LF+ M ++ + PS +Y SL++ ++G
Sbjct: 530 IIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELG 572
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 125/274 (45%), Gaps = 13/274 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ NV A+ LL + + + P+ YN ++ + +D ++++L L
Sbjct: 183 NELICGFCRKKNVHRAMALLSKMLESRL-TPSVVTYNSLIHGQCKIGYLDSAYRLLN--L 239
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF-----AFAK 115
++ + D +T FI T C + I V+ + E I N +I+ + K
Sbjct: 240 MNENGVVPDQWT--YSVFIDTL-CKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCK 296
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ +++ A + D + C P+ TYN ++D L + +V + L SM + G+ +
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y L+ + K D +M SG +PD+ YTA I +F GNI+E+ + + M
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + P Y +ID +G ++ A + + M
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRM 450
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 109/282 (38%), Gaps = 36/282 (12%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVS 62
+I C GN+ A ++ + ++ + +P+A Y V+ A ++ +F +LK + +
Sbjct: 395 FIHAFCTRGNIKEAEDMMSMMFERGV-MPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDT 453
Query: 63 SRTLSSDCYTNFARAFIMTD-----------------------DCTQLLIF------IEE 93
S Y+ + + + D +++ F E+
Sbjct: 454 GCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEK 513
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+++ +I ++I K ++ A +FDH+ P YN +L+ +G
Sbjct: 514 MLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGI 573
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
D + +M E G +P S N L L + + + F + + G D + +
Sbjct: 574 YGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKI 633
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQ--QIRPSIYVYRSLIDNL 253
LID + G + L M+ + QI P YR LI+ L
Sbjct: 634 LIDGLLKNGLSDGCSELLGVMEARGCQIHPQ--TYRMLIEGL 673
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 130/260 (50%), Gaps = 3/260 (1%)
Query: 14 NVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
++++A R S+ + PN YN ++ A + IL+D+ + + Y
Sbjct: 170 SLTSARRFFDSMLSDGV-APNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTY 228
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
AF + + + + +++ N ++ K+ ++E A +FD +
Sbjct: 229 NTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVR 288
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
PD ++YN ++ + G ++ L+ FA M + G++PD +++ +L++ + K L+
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ R+M E G++ + +T+TALID F + G ++++L MKQ +I+PS+ Y +LI+
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALIN 408
Query: 252 NLKKMGKVDLAMTIFEEMNS 271
+G++D A + EM +
Sbjct: 409 GYCMVGRMDEARELLHEMEA 428
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 34/254 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I +CKAGN+ AV L++ +R++ + + N++ +F L D
Sbjct: 337 IHVMCKAGNLERAVTLVRQMRERGL--------------QMNEV--TFTALID------- 373
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
F + + D L+ + + Q S++ N +I + ++++A +
Sbjct: 374 -------GFCKKGFLDD----ALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEAREL 422
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ KPD++TY+ ++ + + M E GV+PD I+Y++L+ L
Sbjct: 423 LHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCG 482
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+RL + F+ M + G++PD TYT+LID + GN+E +L L + M + + P +
Sbjct: 483 EKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVT 542
Query: 246 YRSLIDNLKKMGKV 259
Y LI+ L K +
Sbjct: 543 YSVLINGLSKSARA 556
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 116/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +AG V A RL+ +R+ + PN +N ++ + ++ + ++ +++
Sbjct: 229 NTLVAAFFRAGEVDGAERLVGMMREGGL-KPNLVTFNSMVNGMCKAGKMEDARKVFDEMV 287
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + L E+ Q ++ +I K+ +E
Sbjct: 288 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 347
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + ++ + + +T+ ++D + G ++D L MK+ + P + YN L+
Sbjct: 348 RAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALI 407
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N + R+D EM G+KPD++TY+ +I ++ + + + L M ++ +
Sbjct: 408 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 467
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI L ++ A +F+ M
Sbjct: 468 PDAITYSSLIRVLCGEKRLSDAHVLFKNM 496
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 123/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +CKAG + A ++ + + + P+ +YN ++ + + + ++
Sbjct: 264 NSMVNGMCKAGKMEDARKVFDEMVREGL-APDGVSYNTLVGGYCKAGCSHEALSVFAEMT 322
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+T+ + + + + ++ + + + +I F K ++
Sbjct: 323 QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 382
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
ALL +K + KP ++ YN +++ VGR+++ M+ G+ PD ++Y+T++
Sbjct: 383 DALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 442
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K ++M E G+ PD +TY++LI + ++ LF +M + ++
Sbjct: 443 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQ 502
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y SLID K G V+ A+++ ++M
Sbjct: 503 PDEFTYTSLIDGHCKEGNVESALSLHDKM 531
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 34/136 (25%)
Query: 168 GVVPDFISYNTLL-----NNLRKIRRL---------------------DLC--------L 193
G VP ++YN +L +L RR LC L
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
R+M +G P+++TY L+ +F R G ++ + RL M++ ++P++ + S+++ +
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 254 KKMGKVDLAMTIFEEM 269
K GK++ A +F+EM
Sbjct: 271 CKAGKMEDARKVFDEM 286
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 110/284 (38%), Gaps = 18/284 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G + A LL + K + P+ Y+ ++ A + D +F++ + +L
Sbjct: 404 NALINGYCMVGRMDEARELLHEMEAKGL-KPDVVTYSTIISAYCKNCDTHSAFELNQQML 462
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ R + + + ++++ +I K +E
Sbjct: 463 EKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 522
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + D + PD++TY+++++ L + R + + +P Y+ L+
Sbjct: 523 SALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582
Query: 181 NNLRKIR-RLDLCLI--------------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ RK + L L+ ++ M + D Y+ LI R GN+
Sbjct: 583 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 642
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++L M Q P+ SLI L + G V A + +++
Sbjct: 643 KALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 686
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 14/263 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--------CVLVASAETNDIDLSFQ 54
N I C AG AVRLL + K P+ Y C L AE ++ F
Sbjct: 235 NSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNV---FG 291
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
++ + +S + N + + ++ + +V+ ++I + +I +
Sbjct: 292 LMIKRGLEPDVVSCNALMN---GWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYC 348
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K + +++AL + + PD +TYN +LD L + GRV + +M+ +G PD I
Sbjct: 349 KVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLI 408
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN LL++ K LD L F+ + ++GI P++ TY LID + G ++ + +F +
Sbjct: 409 TYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLL 468
Query: 235 KQQQIRPSIYVYRSLIDNLKKMG 257
+ RP+I Y +I+ L++ G
Sbjct: 469 SVKGCRPNIRTYNIMINGLRREG 491
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+ N +I F + Q + A+ L+ + + +PD+ T+NI++D L ++G V + N F
Sbjct: 231 VFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVF 290
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G+ PD +S N L+N + F M E G P++++Y+ LI+ + +
Sbjct: 291 GLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKV 350
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++E+LRL +M Q+ + P Y L+D L K G+V + E M +S
Sbjct: 351 KMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRAS 401
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILG 149
++ + P SI+ +N+++ + K++ + + H+ KG KP L+T +I ++ L
Sbjct: 44 HRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTP-KPSLVTLSIFINSLT 102
Query: 150 RVG-----------------------------------RVNDMLNEFASMKEAGVVPDFI 174
+G R + LN + G D +
Sbjct: 103 HLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEV 162
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
Y TL+N L K+ + + R+M + G++P+L+ Y ++D + G + E+ L ++M
Sbjct: 163 CYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEM 222
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I ++ Y SLI G+ A+ + EM
Sbjct: 223 VGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEM 257
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 42/215 (19%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
NGY CK V A+RLL + +N+ +P+ YNC+L +++ + + +++ +
Sbjct: 345 NGY----CKVKMVDEALRLLTEMHQRNL-VPDTVTYNCLLDGLSKSGRVLYEWDLVEAMR 399
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + +P+ +I N ++ + K ++
Sbjct: 400 ASGQ----------------------------------APD-LITYNVLLDDYLKRECLD 424
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL +F HI P++ TYNI++D L + GR+ F + G P+ +YN ++
Sbjct: 425 KALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMI 484
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
N LR+ LD EM + G P+ +T+ L+
Sbjct: 485 NGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLV 519
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/270 (18%), Positives = 110/270 (40%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETN--DIDLSFQILKDLL 60
N + + K + V L L K P+ + ++ T+ + L+F ++ ++
Sbjct: 59 NKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIV 118
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T + + + L + V + +I K +
Sbjct: 119 KRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTR 178
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + ++ +P+LI YN+V+D L + G V + + M G+ D +YN+L+
Sbjct: 179 DAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLI 238
Query: 181 NNLRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + + EM + ++PD+ T+ L+D+ + G + E+ +F M ++ +
Sbjct: 239 HGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGL 298
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + +L++ G + A +F+ M
Sbjct: 299 EPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CK G+ A++LL+ + D + PN Y+ ++ A + + ++ + ++ V
Sbjct: 171 INGVCKIGDTRGAIKLLRKI-DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG 229
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ F + + + + E+V ++ N ++ A K ++++A
Sbjct: 230 ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + KPD+ITY+ ++D V V + F +M GV PD +Y L+N
Sbjct: 290 SVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Query: 184 RKIRRLDLCLIYFREMGESGIKP-----------------------------------DL 208
K + +D L F+EM + + P D+
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADV 409
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY++LID + G+++ ++ LFN MK Q+IRP+I+ + L+D L K G++ A +F++
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQD 469
Query: 269 M 269
+
Sbjct: 470 L 470
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 129/280 (46%), Gaps = 5/280 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ LC G V A+ L + L +Y ++ + D + ++L+ +
Sbjct: 133 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG 192
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + Y+ A ++ E+ ++ + +I+ F ++++
Sbjct: 193 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKE 252
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + + P++ TYNI++D L + G+V + + A M +A V PD I+Y+TL++
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMD 312
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + F M G+ PD+ TYT LI+ F + ++E+L LF +M Q+ + P
Sbjct: 313 GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
I Y SLID L K G++ + +EM D P D
Sbjct: 373 GIVTYSSLIDGLCKSGRIPYVWDLIDEMR----DRGQPAD 408
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 126/266 (47%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C G + A+ LL + K I PN YN ++ A + + + +L +L +
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTIN-PNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ + + + + + + + +I F K++ +++AL
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + P ++TY+ ++D L + GR+ + + M++ G D I+Y++L++ L
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGL 419
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K LD + F +M + I+P++ T+T L+D + G ++++ +F D+ + ++
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y +I+ K G ++ A+T+ +M
Sbjct: 480 YTYNVMINGHCKQGLLEEALTMLSKM 505
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 87/167 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
II N+I+ +FAK + A+ + ++ +PDLIT NI+++ +G++ + A
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ + G PD ++ NTL+ L ++ L + ++ G + + ++Y LI+ + G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++L + + +P++ +Y ++ID L K V A +F EM
Sbjct: 179 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 225
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V A +L + K P+ Y+ ++ ++ + + + +
Sbjct: 276 VDALCKEGKVKEAKSVLAVML-KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T YT F + L +E+ Q I+ + +I KS +I
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVW 394
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D ++ D+ITY+ ++D L + G ++ + F MK+ + P+ ++ LL+ L
Sbjct: 395 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL F+++ G ++ TY +I+ + G +EE+L + + M+ P+
Sbjct: 455 CKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNA 514
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + ++I L K + D A + +M
Sbjct: 515 FTFETIIIALFKKDENDKAEKLLRQM 540
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K + S AV L L K I P+ N ++ I F +L +L
Sbjct: 63 NKILDSFAKMKHYSTAVSLSHRLELKGI-QPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + + L F ++++ + + +I K
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + I G KP++ Y+ ++D L + V++ F+ M G+ D ++Y+TL+
Sbjct: 182 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 241
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+L + EM I P++ TY L+D+ + G ++E+ + M + ++
Sbjct: 242 YGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P + Y +L+D + +V A +F M+
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 76/158 (48%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ ++ A+ F+ + ++ P +I +N +LD ++ + ++ ++ G+ PD I+
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L+N + ++ ++ + G PD +T LI G ++++L + +
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
Q + + Y +LI+ + K+G A+ + +++ L+
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLT 195
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ V+D +++F M P I +N +L++ K++ + + GI+PDL+T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ F G I + + ++ P +LI L G+V A+ +++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155
>gi|341605761|gb|AEK82983.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIXLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + I Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++ L + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIXLLHRM 78
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 99/169 (58%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + +I ++K + E+AL + + +K ++ + D + YN +L I + G+ ++ N
Sbjct: 121 NVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVC 180
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+E G+ D ++YN+L+N K RLD+ I ++M + G+ P +LTY+ LID + +
Sbjct: 181 DEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKA 240
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G ++ ++ D K+ ++P + ++ S ID L K G ++ A+++ +M
Sbjct: 241 GMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMT 289
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 116/234 (49%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I+ +CK GN+ A+++L + K + PN Y+ ++ ++ + + ++ + +
Sbjct: 91 NTFIDAICKCGNMELAMQVLLDMEAKGV-KPNVVTYSTLIDGYSKLEKYEEALKLCEKMK 149
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L CY ++ ++ +E+ ++ + + N +I + K +++
Sbjct: 150 SMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLD 209
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++ ++ P ++TY+ ++DI + G D N + KE+G+ PD + +++ +
Sbjct: 210 IVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFI 269
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ L K ++ L +M E GIKP+++TY A+ID+FG++ + E DM
Sbjct: 270 DTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMMEDDSEVGDM 323
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 110/220 (50%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN + A + +++L+ Q+L D+ + Y+ + + + L E++
Sbjct: 90 YNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMK 149
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + N ++ + K+ + + + D ++ L + D +TYN +++ G+ GR++
Sbjct: 150 SMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLD 209
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ M++ GV P ++Y+TL++ K + + ESG+KPD++ +++ I
Sbjct: 210 IVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFI 269
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
D+ + G IE +L L NDM + I+P++ Y ++ID K
Sbjct: 270 DTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGK 309
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + +KG +P ++YN V+D G+ G + L F M + G+ PD ++N+LL
Sbjct: 3 VLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAAC 62
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ L+ F EM GI D+ TY ID+ + GN+E ++++ DM+ + ++P++
Sbjct: 63 SRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNV 122
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LID K+ K + A+ + E+M S
Sbjct: 123 VTYSTLIDGYSKLEKYEEALKLCEKMKS 150
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 11/244 (4%)
Query: 35 AYNCVLVASAETNDIDLSF------QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
+YN V+ A + +DL F Q+LKD L R + +R + D
Sbjct: 18 SYNAVIDACGK-GGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLEDARA--- 73
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+E++ + I N I A K +E A+ + ++ KP+++TY+ ++D
Sbjct: 74 -VFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGY 132
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
++ + + L MK + D + YNTLL K + EM E GI+ D
Sbjct: 133 SKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDT 192
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TY +LI+ +G+ G ++ L DM+++ + PS+ Y +LID K G A ++ +
Sbjct: 193 VTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLD 252
Query: 269 MNSS 272
S
Sbjct: 253 FKES 256
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTN----FARAFIMTDDCTQLLIFI 91
YN ++ + +D+ +++D+ S Y+ +++A + D L F
Sbjct: 195 YNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFK 254
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E ++ P+ +++ + I AK+ IE AL + + + + KP+++TYN ++D
Sbjct: 255 ESGLK---PD-VVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAF--- 307
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNN-------------LRKIRRLDLCLIYFRE 198
G+ M+ + + + + G+V + + N +R+ + L L F++
Sbjct: 308 GKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILELFQK 367
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIE------ESLRLFND 233
M + G++P+++T++A++++ R + E E LRLF++
Sbjct: 368 MVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDN 408
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 7/261 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I++ CK G + A +L + K + L NA YNC++ A + + + + D+ SS
Sbjct: 431 IDRFCKEGRLEEARNVLDEMSGKGLAL-NAVGYNCLISALCKDEKVQDALNMFGDM--SS 487
Query: 64 RTLSSDCYTNFARAFIM--TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ D +T + F + + + L ++++ + I N +I AF + +++
Sbjct: 488 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 547
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL + + + C D ITYN ++ L R G + L F M G+ P+ IS N L+N
Sbjct: 548 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 607
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + + L + R+M G+ PD++TY +LI+ +TG +E+L LF+ ++ + I P
Sbjct: 608 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 667
Query: 242 SIYVYRSLIDNLKKMGKVDLA 262
Y +LI K G D A
Sbjct: 668 DAITYNTLISWHCKEGMFDDA 688
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N I LCK V A+ + + K +IF +N ++ + N + + + +D
Sbjct: 463 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIF---TFNSLIFGLCKVNKFEEALGLYQD 519
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L+ ++ Y AF+ + L + +++ P I N +I A ++
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 579
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
IEK L +F+ + P+ I+ NI+++ L R G + L M G+ PD ++YN+
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K R L F ++ GI PD +TY LI + G +++ L +
Sbjct: 640 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 699
Query: 239 IRPSIYVYRSLIDNLKKMG 257
P+ + L+ N K G
Sbjct: 700 FIPNEVTWYILVSNFIKEG 718
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A K +++ AL +F + CKPD+ T+N ++ L +V + + L + M
Sbjct: 463 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 522
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV+ + I+YNTL++ + + L +M G D +TY LI + R GNIE+
Sbjct: 523 EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 582
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L LF DM + + P+ LI+ L + G + A+ +M
Sbjct: 583 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E ++ + I N +I K + A + + ++ C+P++ITY I++D +
Sbjct: 378 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 437
Query: 152 GR-----------------------------------VNDMLNEFASMKEAGVVPDFISY 176
GR V D LN F M G PD ++
Sbjct: 438 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 497
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L+ L K+ + + L +++M G+ + +TY LI +F R G ++E+L+L NDM
Sbjct: 498 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y LI L + G ++ + +FE+M S
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 592
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 113/269 (42%), Gaps = 32/269 (11%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+ V+ A N++D + +LKD+ ++ Y A ++L +EE+
Sbjct: 219 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEM 278
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ + + N I K +I +A + D + P+ TY +++ L R+G+V
Sbjct: 279 LLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKV 338
Query: 155 ------------------NDMLNEFAS--------------MKEAGVVPDFISYNTLLNN 182
N ++N + S M G PD +YNTL+
Sbjct: 339 DEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 398
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K L EM G +P+++TYT LID F + G +EE+ + ++M + + +
Sbjct: 399 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 458
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L K KV A+ +F +M+S
Sbjct: 459 AVGYNCLISALCKDEKVQDALNMFGDMSS 487
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P + T+ +V+ L V V+ M G VP+ I Y TL++ L K+ R++ L
Sbjct: 215 PTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKL 274
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
EM G PD+ T+ I + I E+ +L + M + P+ + Y L+ L +
Sbjct: 275 LEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCR 334
Query: 256 MGKVDLA 262
MGKVD A
Sbjct: 335 MGKVDEA 341
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P F SYN +L+ L + F EM GI P + T+ ++ + ++ + L
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
DM + P+ VY++LI L K+G+V+
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVN 269
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLD 146
+ + + + + I N +I + + ++AL + + +G +C PD++++N V+
Sbjct: 213 VLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIH 272
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G V+ N M + GV PD ++YN++++ L K R +D + R+M + G++P
Sbjct: 273 GFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEP 332
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D LTYTA+I + +G+ +ES ++F M + + P I + S + +L K G+ A IF
Sbjct: 333 DGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIF 392
Query: 267 EEMNS 271
+ M +
Sbjct: 393 QYMTT 397
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I K G VS A L+ + K + P+ YN ++ A + +D + +L+ ++
Sbjct: 268 NTVIHGFFKQGEVSKACNLINEMVQKGV-EPDVVTYNSIVDALCKARAMDKAELVLRQMV 326
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
YT + + + ++ I+ N + + K + +
Sbjct: 327 DKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSK 386
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IF ++ PDL++Y+I+L GR DM N F SM + G+V + +N L+
Sbjct: 387 DAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILI 446
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D ++ F EM G++PD++TY+ LI +F R G + +++ F+ M +
Sbjct: 447 SAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLE 506
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ VY SLI G + A + EM S
Sbjct: 507 PNTVVYHSLIHGFCMHGDLVKAKELVSEMMS 537
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 6/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVR-LLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
N +++ LC A AV LL + D +PNA YN V+ + + + +++ +
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGC-VPNAISYNTVIKSLCGDSRSQEALDMVQRM 253
Query: 60 LVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S D + F + ++ I E+VQ ++ N I+ A K+R
Sbjct: 254 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKAR 313
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++KA L+ + +PD +TY ++ G + F M G++P +++N
Sbjct: 314 AMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFN 373
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+ +++L K R F+ M G PDL++Y+ L+ + G + LF+ M +
Sbjct: 374 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK 433
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I + + + LI K G +D AM +F EM
Sbjct: 434 GIVANCHCFNILISAHAKRGMMDEAMLVFTEMQG 467
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ +V + ++ N ++ + KS +I+ L++F + K KP +TY+IVLD L
Sbjct: 603 LDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFH 662
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GR + F M ++G D +Y LL L + D + F ++G K D+
Sbjct: 663 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 722
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+I++ + EE+ LF + + P++ Y +I NL K G V+ A T+F M
Sbjct: 723 LNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSME 782
Query: 271 SS 272
S
Sbjct: 783 KS 784
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 101/184 (54%), Gaps = 1/184 (0%)
Query: 87 LLIFIEEVVQIAS-PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
++I++ E +Q+ P ++ N ++ F + Q+ AL + L +PD++T+ +L
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLL 158
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ R R+ D L F M E G P+ + YNT+++ L K +++D L M GI+
Sbjct: 159 NGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIR 218
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD +TY +LI +G +++ R+ + M +++I P ++ + +LID K G++ A +
Sbjct: 219 PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEEL 278
Query: 266 FEEM 269
+EEM
Sbjct: 279 YEEM 282
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + F D L + +V++ ++++ N II KS+Q++ AL + + ++
Sbjct: 154 FGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+PD +TYN ++ L GR +D + M + + PD ++N L++ K R+
Sbjct: 214 VDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRIS 273
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ EM + PD++TY+ LI ++E+ ++F M + P + Y LI
Sbjct: 274 EAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILI 333
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
+ K KV+ M +F EM+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMS 353
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 132/274 (48%), Gaps = 13/274 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC +G A R++ + + I+ P+ +N ++ A + I + ++ ++++
Sbjct: 225 NSLISGLCNSGRWDDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRISEAEELYEEMI 283
Query: 61 VSSRTLSSD--CYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
R+L D Y+ M D+ Q+ F+ V + P+ ++ + +I + K
Sbjct: 284 --RRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM--VSKGCFPD-VVTYSILINGYCK 338
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
S+++E + +F + + +TY +++ R G++N F M GV P+ I+
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIIT 398
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN LL+ L +++ L+ +M +SG+ D++TY +I + G + ++ L+ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLN 458
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + P I+ Y +++ L K G A +F +M
Sbjct: 459 LKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKM 492
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 131/272 (48%), Gaps = 7/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK+ V A+ LL + I P+A YN ++ + D + +++
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEVDGI-RPDAVTYNSLISGLCNSGRWDDATRMVS--C 246
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ R + D +T A A + ++ EE+++ + I+ + +I+ +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F + C PD++TY+I+++ + +V + F M + GVV + ++Y
Sbjct: 307 LDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTV 366
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + +L++ F+ M G+ P+++TY L+ G IE++L + DM++
Sbjct: 367 LIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSG 426
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ I Y +I + K G+V A ++ +N
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDLYCSLN 458
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+VQ SI +R++ A +K ++ + + +++ ++ L +L T NI+L+ R
Sbjct: 71 HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCS 130
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+++ L+ M + G PD +++ +LLN + R+ L F M E G +P+++ Y
Sbjct: 131 QLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYN 190
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+ID ++ ++ +L L N M+ IRP Y SLI L G+ D A
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N +I A K +I +A +++ + PD++TY++++ L R+++ F
Sbjct: 256 VFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFG 315
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G PD ++Y+ L+N K ++++ + F EM + G+ + +TYT LI + R G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAG 375
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ + +F M + P+I Y L+ L GK++ A+ I +M S D
Sbjct: 376 KLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMD 428
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 84/152 (55%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ +L +F H+ + P + ++ +L + ++ + + ++ + M+ G+ + + N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LLN + +L L L + +M + G +PD++T+ +L++ F R I ++L +F+ M +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ +Y ++ID L K +VD A+ + M
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 6/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G V AA L + + PNA YN ++ + + +D + ++ +
Sbjct: 103 INGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITE--ARK 160
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R + D Y A + L ++ + +++ N II ++R++
Sbjct: 161 RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLAD 220
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL +F+ + P+L+TY++V+D L + ++++ M G PD ++Y L+
Sbjct: 221 ALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVL 280
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
RLD L R M G PD++TYT +ID + G ++++ +F ++ + P
Sbjct: 281 GFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSP 340
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y +LI + +VD + EM
Sbjct: 341 NVVTYSALIGGYCRASRVDEGGKVMREM 368
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 17/279 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL---------RDKNIFLPNAYNCVLVASA-ETNDIDLS 52
N I C A ++ AA LL+ + R +I L C VA A E D L
Sbjct: 29 NVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLE 88
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
+ +VS TL + R D +F + V + N ++
Sbjct: 89 LAHAQPDVVSYTTLING-LCKLGRVDAAFD------LFRKMVAAGGCRPNAFTYNALVDG 141
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K +++ A + + PD++TYN ++ L ++GRV++ L F M E G VP
Sbjct: 142 LCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 201
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+S+N ++ L + RRL L F EM + P+L+TY+ +ID ++ ++E+ +L +
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 261
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + RP + Y L+ G++D A+ + M S
Sbjct: 262 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVS 300
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 135/274 (49%), Gaps = 14/274 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSF----QIL 56
N ++ LCK + AA ++ R ++ F P+ YN ++ A + +D + Q+
Sbjct: 136 NALVDGLCKQDRLDAARAVITEARKRD-FAPDVVTYNTLMAALFQLGRVDEALATFTQMT 194
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
++ V + + T RA + D L +F E + + P +++ + +I KS
Sbjct: 195 EEGYVPTLVSFNAIITGLCRARRLAD---ALEVFNEMIDRDFHP-NLVTYSVVIDGLCKS 250
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
Q+++A + D + C+PDL+ Y ++ GR++ L M G +PD ++Y
Sbjct: 251 DQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTY 310
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+++ L K+ R+D FRE+ + P+++TY+ALI + R ++E ++ M++
Sbjct: 311 TVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MRE 367
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
RP++ Y ++I L + + + A +F EM+
Sbjct: 368 MACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMS 401
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 126/266 (47%), Gaps = 8/266 (3%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA---YNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
+AG+ + A LQ R+ LP + YN ++ +D+D +F +L+++ V +
Sbjct: 3 RAGSHNQA---LQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES-IIVVNRIIFAFAKSRQIEKALLIF 126
+ + Q L + +++A + ++ +I K +++ A +F
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119
Query: 127 DH-IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ C+P+ TYN ++D L + R++ ++ PD ++YNTL+ L +
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ R+D L F +M E G P L+++ A+I R + ++L +FN+M + P++
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +ID L K ++D A + + M S
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVS 265
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 6/214 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC+A ++ A+ + + D++ F PN Y+ V+ +++ +D + Q+L ++
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRD-FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
YT F L + +V ++ +I K +++
Sbjct: 265 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 324
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IF + KC P+++TY+ ++ R RV++ M+E P+ ++YNT++
Sbjct: 325 DAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDE---GGKVMREMACRPNVVTYNTMI 381
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
L + R + FREM E G PD TY L
Sbjct: 382 WGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK+ + A +LL + + P+ AY +++ + +D + +L+
Sbjct: 244 IDGLCKSDQLDEAQQLLDRMVSEGC-RPDLVAYTPLVLGFSAAGRLDSALGLLR------ 296
Query: 64 RTLSSDCYTNFARAFIMTDDCTQL-------LIFIEEVVQIASPESIIVVNRIIFAFAKS 116
R +S C + ++ D ++ IF E V SP +++ + +I + ++
Sbjct: 297 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSP-NVVTYSALIGGYCRA 355
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++++ + ++ + C+P+++TYN ++ L V R + F M E G VPD +Y
Sbjct: 356 SRVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412
Query: 177 NTLLNNLRKI 186
L LR I
Sbjct: 413 RGLKRALRMI 422
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 133/272 (48%), Gaps = 8/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLL-QSLRDKNIFLPNAYNCVLV-ASAETNDIDLS---FQILKDLL 60
+ +LC A V +A+ +L + + + L A LV ++ D+ + F ++ L
Sbjct: 9 VRRLCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLG 68
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V+ ++ YT + + + E+ + ++ N ++ + ++ + +
Sbjct: 69 VTPNEVT---YTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFK 125
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A L+FD + ++++YNI++ L R G++ D F +M+ G+ P +++N L+
Sbjct: 126 SARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLI 185
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K ++ L +F +M +G++P ++TY LI F R +I ++R F+DMK++++
Sbjct: 186 DGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLA 245
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ Y LI K ++D A + EM +
Sbjct: 246 PTKVTYTILIGAFAKENEMDRAFEMLSEMEKA 277
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C + C++G+V+ A R+ + + PN Y ++ ++ F ++ ++
Sbjct: 41 CTALVHGCCQSGDVAEARRVFDVMPRLGV-TPNEVTYTALIHGYFVRGQREMGFALVGEM 99
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ Y + T + + +E+ +++ N +I + ++
Sbjct: 100 RRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKL 159
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A +F+ ++ P ++T+N+++D G+ G++++ L+ F MK AG+ P ++YN L
Sbjct: 160 KDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNEL 219
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + R + + F +M E + P +TYT LI +F + ++ + + ++M++ +
Sbjct: 220 IGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGL 279
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y L+ L GK+ A +F+ M+S
Sbjct: 280 EVDVQSYGVLLHALCMEGKMMHARKLFQSMDS 311
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 34/267 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LC+ G + A +L +++R + I P+ ++F +L D
Sbjct: 150 IAGLCRHGKLKDAAQLFEAMRREGIH-PSM---------------VTFNLLID------- 186
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ +A M++ L F ++ S++ N +I F ++R I A+
Sbjct: 187 -------GYGKAGKMSN----ALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRA 235
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F +K + P +TY I++ + ++ + M++AG+ D SY LL+ L
Sbjct: 236 FSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCM 295
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
++ F+ M G+KP+ + Y +I +GR G+ ++LRL +M++ + P++
Sbjct: 296 EGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVAS 355
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y I L GK A + +M +
Sbjct: 356 YCLTIRLLCNEGKCQEAEALIGDMEDA 382
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 102/183 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ E++ + + + +I A+ ++ ++ AL ++D + K + D +T++ ++ I G
Sbjct: 233 WFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYG 292
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
G + LN + MK GV P+ + YNTLL+ + + +R ++EM +G++P
Sbjct: 293 MSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWG 352
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY AL+ ++GR E++L ++ +MK++ + S+ +Y +L+ +G + A IFE+M
Sbjct: 353 TYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDM 412
Query: 270 NSS 272
SS
Sbjct: 413 KSS 415
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 102/191 (53%), Gaps = 10/191 (5%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLIT 140
+D +Q+L + + +I +++IV+N + E ALL F K LK ++I
Sbjct: 128 EDVSQVLRCLGD--KILEQDAVIVLNNMT-------NPETALLAFGFFRKRLKPSREVIL 178
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN+ L + + ++ F M E GV PD I+++T+++ R + + +F +M
Sbjct: 179 YNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMP 238
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
E G PD +TY+A+ID++GR GN++ +L+L++ + ++ R + +LI G D
Sbjct: 239 EFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFD 298
Query: 261 LAMTIFEEMNS 271
+ ++EEM +
Sbjct: 299 GCLNVYEEMKA 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 97/193 (50%)
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
MT+ T LL F ++ +I+ N + F K R +++A +FD + KPD I
Sbjct: 153 MTNPETALLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNI 212
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
T++ ++ N + F M E G PD ++Y+ +++ + +D+ L +
Sbjct: 213 TFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRA 272
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ D +T++ LI +G +GN + L ++ +MK ++P++ +Y +L+D + + +
Sbjct: 273 RTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRP 332
Query: 260 DLAMTIFEEMNSS 272
A I++EM ++
Sbjct: 333 WQAKNIYKEMTNN 345
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I + S + L +++ +K L KP+L+ YN +LD +GR R N +
Sbjct: 282 VTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKE 341
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ P + +Y LL + R + LI ++EM E G++ ++ Y L+ G
Sbjct: 342 MTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGY 401
Query: 224 IEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE+ +F DMK P + + SLI GKV A + M
Sbjct: 402 TEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAM 448
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + + P++I + II S KA+ F+ + C PD +TY+ ++D
Sbjct: 198 LFDEMLERGVKPDNI-TFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAY 256
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
GR G V+ L + + D ++++TL+ D CL + EM G+KP+L
Sbjct: 257 GRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNL 316
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ Y L+D+ GR ++ ++ +M ++PS Y +L+ + + A+ +++E
Sbjct: 317 VIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKE 376
Query: 269 M 269
M
Sbjct: 377 M 377
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 104/235 (44%), Gaps = 1/235 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
Y+ ++ A ++D++ ++ + ++ R + M+ + L EE+
Sbjct: 249 YSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMK 308
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ ++++ N ++ A ++++ +A I+ + +P TY +L GR
Sbjct: 309 ALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAE 368
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG-IKPDLLTYTAL 214
D L + MKE G+ + YNTLL + + F +M SG PD T+++L
Sbjct: 369 DALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSL 428
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I + +G + E+ + N M + P+I+V SLI K + D + F+ +
Sbjct: 429 ITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRL 483
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A+ ++R E AL+++ +K + ++ YN +L + VG + F MK +G
Sbjct: 357 LLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSG 416
Query: 169 -VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+PD ++++L+ ++ M E+G +P++ T+LI +G+ +E
Sbjct: 417 NCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEV 476
Query: 228 LRLFNDMKQQQIRP 241
+R F+ + + I P
Sbjct: 477 VRTFDRLLELDITP 490
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 4/199 (2%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
+GN + + + ++ + PN YN +L A + I K++ + S
Sbjct: 294 SGNFDGCLNVYEEMKALGV-KPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWG 352
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y RA+ LI +E+ + S+++ N ++ A E+A IF+ +
Sbjct: 353 TYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDM 412
Query: 130 KGL-KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
K C PD T++ ++ I G+V++ +M EAG P+ +L+ K R
Sbjct: 413 KSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANR 472
Query: 189 LDLCLIYFREMGESGIKPD 207
D + F + E I PD
Sbjct: 473 TDEVVRTFDRLLELDITPD 491
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 6/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G+V+ A+ LL + K + YN +L + + + +IL+D+
Sbjct: 174 NTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDM- 232
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R ++ D +T A AF+ + + ++++Q + + + N +I +
Sbjct: 233 -TKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A FD + C P+++TYN +++ + RV D + F M G+V D +YNT
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ ++ +L + F M G+ PD++T+ L+ G I ++ FNDM+ +
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGE 411
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
I Y +I L K KV+ A +F
Sbjct: 412 KYLGIVAYNIMIHGLCKADKVEEAWELF 439
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 125/236 (52%), Gaps = 6/236 (2%)
Query: 39 VLVASAETNDIDLS---FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
VL A A+ N D+ F +++L +S S +T F + L + +++
Sbjct: 621 VLTAIAKMNKFDIVIYLFHKMENLGISHDLYS---FTILIHCFCRCSRFSLALALLGKMM 677
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
++ SI+ + ++ F + + ++A+ + D + L +P+++ YN V++ L + +N
Sbjct: 678 KLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLN 737
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ L F M++ G+V D ++YNTL++ L R R+M + I P+++ +TALI
Sbjct: 738 NALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 797
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
D+F + GN+ E+ L+ +M ++ + P+I Y SLI+ G++ A +F+ M S
Sbjct: 798 DTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS 853
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 126/268 (47%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCK +++ A+ + + K I YN ++ + + ++L+D++
Sbjct: 724 NTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVK 783
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ +T F+ + + +E+++ + +I+ N +I F ++
Sbjct: 784 RKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGD 843
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD + C PD++TYN ++ + RV D + F M G+V D +YNTL++
Sbjct: 844 AKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIH 903
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ +L++ F M + G+ PD++TY L+D G IE++L + D+++ Q+
Sbjct: 904 GYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDV 963
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I Y +I + + KV A +F +
Sbjct: 964 DIITYNIIIQGMCRNDKVKEAWCLFRSL 991
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ C+ AV L+ S+ + + PN YN V+ + D++ + +I +
Sbjct: 692 LNGFCQGNRFQEAVSLVDSMAELGL-EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + T + ++V+ ++I +I F K + +A
Sbjct: 751 IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + P+++TYN +++ GR+ D + F M G PD ++YNTL+
Sbjct: 811 NLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGF 870
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +R++ + F EM G+ D TY LI + + G + + ++FN M + P I
Sbjct: 871 CKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDI 930
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
Y L+D L GK++ A+ + E++ + D+
Sbjct: 931 VTYNILLDCLCNNGKIEKALVMVEDLQKNQMDV 963
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 84 CTQL---LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
C++L L + +++++ SI+ ++ F +I A + + +P+++
Sbjct: 113 CSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVV 172
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAG-VVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
YN ++D L + G VN L M++ G + D ++YNTLL L R+M
Sbjct: 173 YNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDM 232
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ I PD+ T+TALID+F + GN++E+ L+ M Q I P+ Y SLI+ L G++
Sbjct: 233 TKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRL 292
Query: 260 DLAMTIFEEMNS 271
A F+ M S
Sbjct: 293 YHAKKTFDLMAS 304
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F + ++ AL I + L P ++T+ +L R++D + ASM ++G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIEES 227
P+ + YNTL++ L K +++ L EM + G + DL+TY L+ +G ++
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
R+ DM +++I P ++ + +LID K G +D A ++++M L GP
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM---LQSSIGP 274
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 115/269 (42%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC +G A R+L+ + + I P+ + ++ A + ++D + ++ K +L
Sbjct: 210 NTLLTGLCYSGEWRQAARILRDMTKRRIN-PDVFTFTALIDAFVKQGNLDEAQELYKQML 268
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
SS ++ Y + M + + +++ N +I F KSR++E
Sbjct: 269 QSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVE 328
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F + D TYN ++ +VG++ + F+ M GV PD I++ LL
Sbjct: 329 DGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL 388
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L + ++ F +M ++ Y +I + +EE+ LF + + ++
Sbjct: 389 HGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVK 448
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +I L K G A +F M
Sbjct: 449 PDARTYTIMILGLCKNGPRREADELFRRM 477
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 116/257 (45%), Gaps = 3/257 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC +G + A RLL+ + + I PN + ++ + ++ + + K+++
Sbjct: 759 NTLISGLCNSGRWTDAARLLRDMVKRKID-PNVIFFTALIDTFVKEGNLLEAKNLYKEMI 817
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + Y + F + + +V ++ N +I F KS+++E
Sbjct: 818 RRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 877
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F + D TYN ++ + G++N F M + GV PD ++YN LL
Sbjct: 878 DGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILL 937
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L +++ L+ ++ ++ + D++TY +I R ++E+ LF + ++ ++
Sbjct: 938 DCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVK 997
Query: 241 PSIYVYRSLIDNLKKMG 257
Y ++I L + G
Sbjct: 998 LDAIAYITMISGLCRNG 1014
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I + ++ ++ A +F+ + PD++TYNI+LD L G++ L +++
Sbjct: 899 NTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 958
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ D I+YN ++ + + ++ FR + G+K D + Y +I R G E
Sbjct: 959 NQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRRE 1018
Query: 227 SLRLFNDMKQQQIRPSIYVY 246
+ +L MK+ PS +Y
Sbjct: 1019 ADKLCTRMKEDGFMPSERIY 1038
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 13/189 (6%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F S + E AL +F + + P ++ + +L + + R ++ M+ G+
Sbjct: 39 GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S+ L++ + RL L L +M + G P ++T+ +L+ F I ++ L
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM-------------NSSLSDLAG 278
M + P++ VY +LID L K G V++A+ + EM N+ L+ L
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 279 PKDFKRKAR 287
++++ AR
Sbjct: 219 SGEWRQAAR 227
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 3/272 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
C+ I + G + A + L L+ N + P YN +L + + ILK++
Sbjct: 290 CSTVISACGREGMLDEARKFLAELK-LNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEM 348
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ S Y A ++ + + I+ + + I +I A+ K+ +
Sbjct: 349 EDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGRE 408
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ AL +F +K L C P++ TYN VL +LG+ R D++ MK G P+ ++NT+
Sbjct: 409 DDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 468
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + + REM G +PD T+ LI S+ R G+ +S +++ +M +
Sbjct: 469 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGF 528
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y +L++ L G A ++ ++M +
Sbjct: 529 TPCVTTYNALLNALAHRGDWKAAESVIQDMQT 560
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 36/197 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV-------------- 154
I+ A+A+S + ++A+ +FD ++G+ P L+TYN++LD+ G++GR
Sbjct: 222 ILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSK 281
Query: 155 ------------------NDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
ML+E A +K G P + YN++L K
Sbjct: 282 GLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEA 341
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L +EM ++ PD +TY L ++ R G ++E + + + M + + P+ Y ++ID
Sbjct: 342 LSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDA 401
Query: 253 LKKMGKVDLAMTIFEEM 269
K G+ D A+ +F +M
Sbjct: 402 YGKAGREDDALRLFSKM 418
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 130/284 (45%), Gaps = 18/284 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L G+ AA ++Q ++ K F PN +Y+ +L ++ ++ ++ K++
Sbjct: 536 NALLNALAHRGDWKAAESVIQDMQTKG-FKPNETSYSLLLHCYSKAGNVRGIEKVEKEIY 594
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE----EVVQIASPESIIVVNRIIFAFAKS 116
+ S R ++++ + L +E ++ + ++V+N ++ F+++
Sbjct: 595 -DGQVFPSWI---LLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRN 650
Query: 117 RQIEKA--LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ KA +L F H GL+ P+L TYN ++D+ R ++ + PD +
Sbjct: 651 KMFSKAREMLHFIHECGLQ--PNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVV 708
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYNT++ + + + EM GI+P ++TY + + +E+ + M
Sbjct: 709 SYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFM 768
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAM---TIFEEMNSSLSD 275
+ RPS Y+ L+D K GK + AM T +E++ S D
Sbjct: 769 IEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEIDISFDD 812
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/221 (17%), Positives = 91/221 (41%), Gaps = 2/221 (0%)
Query: 33 PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN +N +L +E + ++L+++ D + ++
Sbjct: 460 PNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKM 519
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
E+V+ + N ++ A A + A + ++ KP+ +Y+++L +
Sbjct: 520 YGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSK 579
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G V + + + V P +I TL+ + K R L F ++ + G KPDL+
Sbjct: 580 AGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVV 639
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+++ F R ++ + + + + ++P+++ Y L+D
Sbjct: 640 INSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMD 680
>gi|356517946|ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 511
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 120/235 (51%), Gaps = 6/235 (2%)
Query: 40 LVAS-AETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIA 98
LV+S A +D+S ++L D+ ++ +++ Y + I + ++ E++++
Sbjct: 113 LVSSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLR 172
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVN 155
VN +I + +I++A + ++ C PD+ITYN ++ ++ V R
Sbjct: 173 YKPVTYTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRAR 232
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+L E E PD +SY +++ K+R+++ + F EM SG P+ T+ ALI
Sbjct: 233 SLLREVCLNGE--FAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALI 290
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
D FG+ G++ +L L++ M Q P + + SLI+ ++ +V AM ++ +MN
Sbjct: 291 DGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMN 345
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 37/266 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ G + A +LL+ LR LP+ YN ++ N++D + +L+++ ++
Sbjct: 184 IRGLCRVGEIDEAFKLLKDLRSFGC-LPDVITYNTLIHGLCLINEVDRARSLLREVCLNG 242
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
F +VV II + K R++E+
Sbjct: 243 E-------------------------FAPDVVSYT---------MIISGYCKLRKMEEGS 268
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L+FD + P+ T+N ++D G++G + L ++ M G +PD ++ +L+N
Sbjct: 269 LLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGH 328
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++R++ + + +M E I L TY+ L+ + ++ + + + I P
Sbjct: 329 FRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQP 388
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y +ID K G VD A I EM
Sbjct: 389 FIYNPVIDGYCKSGNVDEANKIVAEM 414
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
S + + ++ + +S A +++D ++ PD ++ VGR++
Sbjct: 70 HSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVSREL 129
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
A ++ V + + YN L N L + ++ ++ FRE+ KP T LI R
Sbjct: 130 LADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRGLCR 189
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G I+E+ +L D++ P + Y +LI L + +VD A ++ E+
Sbjct: 190 VGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREV 238
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 98/174 (56%), Gaps = 1/174 (0%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q+ +P ++ N +I K ++ +A +F +K + C PD++T+N ++D G+ G ++
Sbjct: 182 QLPAP-NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ M+ +G D ++YN L+N K R++ YF M G+ +++T++ +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D+F + G + E+++LF M+ + + + + Y LID K G++D A+ + +EM
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 135/270 (50%), Gaps = 9/270 (3%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+++ CK G V A++L +R + + L Y C++ + + +D + +L +++
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKSRQI 119
L+ YT + E+V+++ + ++ +I ++
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAE----AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKAL + +K + D+ Y ++ L V ++++ + M E+G+ P++I Y T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K ++ + +++ +SG +P+++TY ALID + G+I+E++ FN M+ +
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +L+D L K G ++ A+ +F EM
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEM 564
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 89/170 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I + K ++++ + + ++ CK D++TYN +++ + GR+ FA
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+MK GV+ + ++++T ++ K + + F +M G+ + TYT LID + G
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+++++ L ++M +Q + ++ Y L+D L K KV A + M +
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 14 NVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT 72
N A+ LL +++K + L + Y ++ + +D + +L + S + YT
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
A + + + +++++ ++I +I K+ I++A+ F+ ++ L
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
P++ Y ++D L + G +N+ + F M G+ D + Y LL+ K L
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+M +SG++ DL YT I F + E+ +F++M I P VY LI
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 253 LKKMGKVDLAMTIFEEMNSSL 273
+K+G ++ A+++ +EM L
Sbjct: 653 YQKLGNLEEAISLQDEMERVL 673
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G ++ A L +++ LP+ +N ++ + ++D Q+++++
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGC-LPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y F + + + +++ + + AF K +
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F ++ + TY ++D + GR++D + M GV + ++Y L+
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R++ R M ++G++ + L YT LI N E++L L ++MK + +
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I +Y +LI L + K+D A ++ +M+ S
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+ +L +L G ++D + A ++E V P+ + N +L L + R L R + E
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRL----VRRLFE 181
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
P++ T+ +ID + G + E+ LF+ MK+ P + + SLID K G++D
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 262 AMTIFEEMNSS 272
+ EEM S
Sbjct: 242 VEQLVEEMRRS 252
>gi|260780352|gb|ACX50722.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVY 246
ALID+ + G ++E++ LF M++++ ++Y Y
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTY 196
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 4/241 (1%)
Query: 33 PNAYNC--VLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+A C ++ A + + I++D+L + S Y N A + + + L
Sbjct: 168 PDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWREALKL 227
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++ + ++ N I+ A+ Q KAL F+ +KG +PD T NI++ L +
Sbjct: 228 CKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTK 287
Query: 151 VGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+G+ + F SM+E A PD +++ ++++ +++ C F M G+KP++
Sbjct: 288 LGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNI 347
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++Y L+ ++ G +E+L +FN +K +RP + Y SL+++ + + A +FE
Sbjct: 348 VSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEM 407
Query: 269 M 269
M
Sbjct: 408 M 408
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 77/140 (55%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ II ++ + QIE +F + KP++++YN ++ G + L+ F
Sbjct: 312 VVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFN 371
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++K +G+ PD +SY +LLN+ + ++ F M +KP++++Y A+ID++G G
Sbjct: 372 AIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNG 431
Query: 223 NIEESLRLFNDMKQQQIRPS 242
+ E++ + +M+Q I P+
Sbjct: 432 LLAEAVEVLREMEQDGIYPN 451
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 89 IFIEEVVQIASPESIIVV-----------------NRIIFAFAKSRQIEKALLIFDHIKG 131
+ I+E+ Q S E I+V N +I A+ ++A +F ++
Sbjct: 104 LLIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYNMMIRLHARHNWTDQARGLFFEMQK 163
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN------NLRK 185
+CKPD T N +++ GR G+ +N M + + P +YN L+N N R+
Sbjct: 164 WRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWRE 223
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
L LC ++M E+G+ PDL+T+ ++ ++ ++L F MK IRP
Sbjct: 224 A--LKLC----KKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTT 277
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+I L K+G+ + A+ IF+ M
Sbjct: 278 LNIIIYCLTKLGQYEKAIGIFKSM 301
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E+++Q A P S N +I A S +AL + + PDL+T+NI+L
Sbjct: 193 MEDMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKT 252
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE--SGIKPDL 208
+ L+ F MK + PD + N ++ L K+ + + + F+ M E + PD+
Sbjct: 253 GAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDV 312
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+T+T++I + G IE +F+ M + ++P+I Y +L+ G A+++F
Sbjct: 313 VTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNA 372
Query: 269 MNSS 272
+ +S
Sbjct: 373 IKNS 376
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F V + P +I+ N ++ A+A ++AL +F+ IK +PD+++Y +L+
Sbjct: 334 VFSTMVAEGLKP-NIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSY 392
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
GR + F MK + P+ +SYN +++ L + REM + GI P+
Sbjct: 393 GRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNA 452
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++ L+ + GR + +++ I+ + Y S I + +G+ + A +++
Sbjct: 453 VSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRS 512
Query: 269 MNSS 272
M S
Sbjct: 513 MRKS 516
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 91 IEEVVQIASPESI----IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV-- 144
I+ V+Q A I I N I ++ + EKA ++ ++ K PD +T+ ++
Sbjct: 471 IDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLIS 530
Query: 145 -----------LDILGRV--------------GRVNDMLNEFASMKEAGVVPDFISYNTL 179
L+ L + G++ + + F MK AG PD ++Y +
Sbjct: 531 GCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAESMFNKMKMAGCSPDVVTYTMM 590
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ +EM E I+PD + +AL+ +F + G+ + L L M++++I
Sbjct: 591 LHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGGDPSKVLILAEFMREKEI 650
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
S ++ ++ + + + + M SS S
Sbjct: 651 PLSDAIFFEMVSACSLLRDWRTTIELIKLMESSFS 685
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 107/211 (50%), Gaps = 37/211 (17%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV---- 151
++ SP+ + N +I + Q++KAL + + + C PD +T+NI++D L R
Sbjct: 76 RVYSPD-VWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVS 134
Query: 152 --------------------------------GRVNDMLNEFASMKEAGVVPDFISYNTL 179
G++ D + + M +G++P+ ++YN L
Sbjct: 135 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 194
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N K+ L + +++M PD++T+++LID + R G ++++LR+++DM Q +I
Sbjct: 195 INGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRI 254
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+P++Y + +I +L K + D A+ + E+N
Sbjct: 255 QPNVYTFSIIIHSLCKQNRSDEAIGLLNELN 285
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ +I + K+ ++E A+ +++ + P+ +TYN++++ G+VG + + +
Sbjct: 152 NVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVY 211
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M PD +++++L++ + +LD L + +M + I+P++ T++ +I S +
Sbjct: 212 QQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQ 271
Query: 222 GNIEESLRLFNDMK-QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++ L N++ + I P ++Y +ID L K GKVD A I + M
Sbjct: 272 NRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGM 320
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ VS +L+ L+ + +PN + V+ + ++ + + D++ S
Sbjct: 124 VDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASG 183
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + D + +++ ++ P ++ + +I + + Q++ AL
Sbjct: 184 IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDAL 243
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNEFASMKEAGVVPDFISYNTLL 180
I+ + + +P++ T++I++ L + R ++ +LNE + + P YN ++
Sbjct: 244 RIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPD--IAPQAFIYNPVI 301
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++D + + M E G +PD TYT LI + I E++ F++M +
Sbjct: 302 DVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCS 361
Query: 241 PSIYVYRSLIDNLKKMG---KVDLAMTIFEEMNSSLSDLAGP 279
P I L K G +VD M + SS+ ++ P
Sbjct: 362 PDSITVNCFISCLLKAGMPNEVDHVMRLASGGASSIQEVPSP 403
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV-PDFISYNTLLNNLRKIRRLDLC 192
C+ + YN ++ L GRV+D++ F + V PD S+N ++ + ++ ++
Sbjct: 42 CRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKA 101
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI-RPSIYVYRSLID 251
L M E G PD +T+ L+D RT + + +++ + P++ + S+I
Sbjct: 102 LELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 161
Query: 252 NLKKMGKVDLAMTIFEEMNSS 272
K GK++ AM ++ +M +S
Sbjct: 162 GYCKAGKLEDAMAVYNDMVAS 182
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 101/179 (56%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++E+++ +++ NR+I + ++ ++ +L +F+ ++ + C+PD +TY ++D+ +
Sbjct: 90 LDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAK 149
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + ++ + M+ AG PD +Y+ +++ L K +L+ F EM + G P L+T
Sbjct: 150 AGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVT 209
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +ID + G + +L+L++D+++ P Y +++ L G ++ A +FEEM
Sbjct: 210 YNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEM 268
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
K D+ TY +L ILGR + + N M G P+ ++YN L++ + LD L
Sbjct: 64 KHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLK 123
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F M G +PD +TY LID + G + ++ L+ M+ RP + Y +I L
Sbjct: 124 LFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLG 183
Query: 255 KMGKVDLAMTIFEEMN 270
K GK++ A +F EM
Sbjct: 184 KAGKLNAAYKLFCEMT 199
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ ++ A +F + P L+TYNI++D+ + G+ + L ++ ++E G
Sbjct: 178 IIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVG 237
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y ++ L ++ F EM +G D + ++D +G+TGN E++
Sbjct: 238 YAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAA 297
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ FN M ++P++ SL+ + D A + M
Sbjct: 298 QWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGM 338
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + +P S++ N II AK+ + + AL ++ ++ + PD +TY I++++L
Sbjct: 194 LFCEMTDRGYAP-SLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVL 252
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + D F M+ AG V D + +++ K + +F M +SG++P++
Sbjct: 253 GNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNV 312
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+L+ ++ R+ + + + M + + P++ Y SL+ +
Sbjct: 313 PACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSS 356
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K+AG D +Y T+L L + + D+ EM G +P+++TY LI +GR ++
Sbjct: 59 KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ SL+LFN M+ P Y +LID K G D AM ++ +M +
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHA 166
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A L+FD I +P +++YN +++
Sbjct: 118 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYI 177
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M+ +GV PD +Y+ L+N L K +D F EM G+ P+ +
Sbjct: 178 RLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXV 237
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P J Y +L+ L K G ++ A + +EM
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM 297
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K ++ A +FD +KGL P+ +T+ ++D + GRV+ + + M
Sbjct: 207 LINGLCKESXMDDANELFDEMLVKGLV--PNXVTFTTLIDGHCKNGRVDLAMEIYKQMLS 264
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
++PD I+YNTL+ L K L+ EM G+KPD TYT LID + G+++
Sbjct: 265 QXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDA 324
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M Q+ IR Y +LI L + G+ A + EM S
Sbjct: 325 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLS 369
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 15/273 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ + P+ +YN ++ D+D F++ + S
Sbjct: 138 MHRFCKDGDIRVAPLVFDAITKWGL-RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASG 196
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD +L F E +V+ P + +I K+
Sbjct: 197 --VQPDVYTYSVLINGLCKESXM-DDANEL--FDEMLVKGLVPNXVTFTT-LIDGHCKNG 250
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ I+ + PDJITYN ++ L + G +N M G+ PD +Y
Sbjct: 251 RVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYT 310
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 311 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSV 370
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 371 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 403
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 112/253 (44%), Gaps = 9/253 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
NGYI + G++ RL ++R + P+ Y ++ + + + +D + ++ ++L
Sbjct: 174 NGYI----RLGDLDEGFRLKSAMRASGV-QPDVYTYSVLINGLCKESXMDDANELFDEML 228
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCT-QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V + +T + I+ + + Q P+ JI N +++ K +
Sbjct: 229 VKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPD-JITYNTLVYGLCKKGDL 287
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A + D + KPD TY ++D + G ++ M + + D ++Y L
Sbjct: 288 NQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAL 347
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L + R REM G+KPD TYT +I+ F + G++ + +L +M++
Sbjct: 348 ISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGH 407
Query: 240 RPSIYVYRSLIDN 252
P + Y L++
Sbjct: 408 VPXVVTYNVLMNG 420
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 58/121 (47%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G + D + + +E + F + +L +L K+R L ++ E+ E G L +
Sbjct: 75 GFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFF 134
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+ F + G+I + +F+ + + +RPS+ Y +L++ ++G +D + M +
Sbjct: 135 NILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRA 194
Query: 272 S 272
S
Sbjct: 195 S 195
>gi|399107198|gb|AFP20363.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 130/279 (46%), Gaps = 10/279 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNI--------FLPN--AYNCVLVASAETNDIDLS 52
N +++ LC+ G + AVR + + + F P+ YN ++ + + +
Sbjct: 255 NIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA 314
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
++LKD + Y + F D + + ++ + SI++ N +I
Sbjct: 315 NRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKG 374
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
++ I AL + + + C P++ TYN+V++ L ++G V+D + G PD
Sbjct: 375 LSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPD 434
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+YNTL++ K +LD M G+ PD++TY L++ + G EE + +F
Sbjct: 435 IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFK 494
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M+++ P+I Y ++D+L K KV+ A+ + EM S
Sbjct: 495 AMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKS 533
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+++ + P I N +I + K +++ A + + + PD+ITYN +L+ L
Sbjct: 422 LVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLC 481
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+ +++ F +M+E G P+ I+YN ++++L K ++++ + EM G+KPD++
Sbjct: 482 KAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVV 541
Query: 210 TYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++ L F + G+I+ + +LF M KQ + + Y ++ + +++AM +F
Sbjct: 542 SFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSV 601
Query: 269 MNSSLSD 275
M +S D
Sbjct: 602 MKNSGCD 608
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 53/312 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ L + G + A++L+ + + N LPN YN V+ + + + ++ D
Sbjct: 369 NTLIKGLSQQGLILPALQLMNEMAE-NGCLPNIWTYNLVINGLCKMGCVSDASHLVDD-- 425
Query: 61 VSSRTLSSDCYTN-FARAFIMTDDCTQL-LIFIEEVV-----QIASPESIIVVNRIIFAF 113
++ C + F ++ C QL L E+V Q +P+ +I N ++
Sbjct: 426 ----AIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPD-VITYNTLLNGL 480
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K+ + E+ + IF ++ C P++ITYNI++D L + +VN+ ++ MK G+ PD
Sbjct: 481 CKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDV 540
Query: 174 ISYNTLLNNLRKI--------------RRLDLC----------------------LIYFR 197
+S+ TL KI ++ D+C + F
Sbjct: 541 VSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFS 600
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG PD TY +ID F + GNI + + + +++ PS+ + +++ L
Sbjct: 601 VMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKD 660
Query: 258 KVDLAMTIFEEM 269
KV A+ I M
Sbjct: 661 KVHEAVGIIHLM 672
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 23/284 (8%)
Query: 3 NGYIEKL---CKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQI 55
YIE + + G V AV + + D ++ NA +LV N +
Sbjct: 77 GAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMR 136
Query: 56 LKDLLVSSRTLSSDCYTNFAR--AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
++D R + SD YT R +F T L + + ++ + + ++
Sbjct: 137 MRD-----RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGL 191
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
S + + A +FD + PD++ +N ++ +L + G V + + + GV P+
Sbjct: 192 YDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNL 251
Query: 174 ISYNTLLNNLRKIRRLDLCL---------IYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++N + L + LD + Y R+M G +PD LTY ++ID + + G +
Sbjct: 252 FTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMV 311
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+++ R+ D + +P + Y SLI+ K G D AM +F++
Sbjct: 312 QDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKD 355
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 28/282 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I+ CK AA+RLL+++ D N AY V+ ++ + D + ++ ++L
Sbjct: 153 IKSFCKTARPYAALRLLRNMPELGCDSNAV---AYCTVVAGLYDSGEHDHARELFDEML- 208
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF---------- 111
+R L D ++ C + L+F E + + + N F
Sbjct: 209 -ARCLCPDVVAFNKLVHVL---CKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCRE 264
Query: 112 -----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
A SR +E + + G +PD +TYN ++D + G V D
Sbjct: 265 GALDRAVRNSRVVEAEEYLRKMVNG-GFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVF 323
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD +Y +L+N K D + F++ G++P ++ Y LI + G I
Sbjct: 324 KGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILP 383
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+L+L N+M + P+I+ Y +I+ L KMG V A + ++
Sbjct: 384 ALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDD 425
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
GR G+V + ++ F M P S+N ++N L + + + M + G++ D+
Sbjct: 87 GRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDV 146
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TYT I SF +T +LRL +M + + Y +++ L G+ D A +F+E
Sbjct: 147 YTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDE 206
Query: 269 M 269
M
Sbjct: 207 M 207
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 103/276 (37%), Gaps = 43/276 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I LCK G VS A L+ K +IF YN ++ + +D + +++ +
Sbjct: 407 INGLCKMGCVSDASHLVDDAIAKGCPPDIF---TYNTLIDGYCKQLKLDSATEMVNRMWS 463
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T Y +++ + + + +II N I+ + K++++ +
Sbjct: 464 QGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNE 523
Query: 122 ALLIFDHIKGLKCKPDLI------------------------------------TYNIVL 145
A+ + +K KPD++ TYNI++
Sbjct: 524 AVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIV 583
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+N + F+ MK +G PD +Y +++ K+ + + E E
Sbjct: 584 SAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFI 643
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
P L T+ +++ + E++ + + M Q+ I P
Sbjct: 644 PSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 98/182 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+ +++++ I+ +I F ++E+A+ + + + + KPD++ Y ++D L
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G VN L+ F M+ G+ PD + Y +L+N L R R M + IKPD++
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+ ALID+F + G ++ L+N+M + I P+I+ Y SLI+ G VD A +F M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 270 NS 271
+
Sbjct: 309 ET 310
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 102/201 (50%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T+ F + + + + + ++V++ +++ II + K+ + AL +FD ++
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME 204
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+PD++ Y +++ L GR D + M + + PD I++N L++ K +
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ EM I P++ TYT+LI+ F G ++E+ ++F M+ + P + Y SLI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ K KVD AM IF EM+
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQ 345
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+I N +I AF K + A +++ + + P++ TY +++ G V++ F
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+ G PD ++Y +L+N K +++D + F EM + G+ + +TYT LI FG+ G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
+ +F+ M + + P+I Y L+ L GKV A+ IFE+M D P
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 132/274 (48%), Gaps = 16/274 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDLL 60
I+ LCK G+V+ A+ L + + I P+ Y + L S D D +L+ +
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGI-RPDVVMYTSLVNGLCNSGRWRDAD---SLLRGM- 238
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R + D T A AF+ E+++++ +I +I F
Sbjct: 239 -TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F ++ C PD++ Y +++ + +V+D + F M + G+ + I+Y T
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ ++ + ++ F M G+ P++ TY L+ G ++++L +F DM++++
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 239 ---IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P+I+ Y L+ L GK++ A+ +FE+M
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Query: 51 LSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
LSF L DL R + Y R + + + L +V+ SII +++
Sbjct: 22 LSFSRLLDLSFWVRAFCN--YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLL 79
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
AK ++ + + + DH++ + DL T N++++ + + + M + G
Sbjct: 80 NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD +++ +L+N R++ + +M E GIKPD++ YT +IDS + G++ +L L
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
F+ M+ IRP + +Y SL++ L G+
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 90/155 (58%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
S Q +AL +F H+ + P +I + +L+++ ++ + + ++N ++ GV D
Sbjct: 49 HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLY 108
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ N L+N + + L + +M + G +PD++T+T+LI+ F +EE++ + N M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I+P + +Y ++ID+L K G V+ A+++F++M
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 86/169 (50%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ N ++ F +S Q A + L +PD++T+ +++ R+ + ++
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
M E G+ PD + Y T++++L K ++ L F +M GI+PD++ YT+L++
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+G ++ L M +++I+P + + +LID K GK A ++ EM
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT+ F + E+ Q + I +I F + + A +F H+
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA---GVVPDFISYNTLLNNLRKIR 187
P++ TYN++L L G+V L F M++ GV P+ +YN LL+ L
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+L+ L+ F +M + + ++TYT +I + G ++ ++ LF + + ++P++ Y
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
++I L + G A +F +M
Sbjct: 500 TMISGLFREGLKHEAHVLFRKM 521
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C G V A ++ + K F P+ AY ++ + +D + +I ++
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T ++ YT + F +V P +I N ++ + +++KAL
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 124 LIFDHIKGLK---CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+IF+ ++ + P++ TYN++L L G++ L F M++ + I+Y ++
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ K ++ + F + G+KP+++TYT +I R G E+ LF MK+ +
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 8/252 (3%)
Query: 22 LQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFI 79
+Q R K PN YN ++ A A + I+ D+ ++ S Y N A
Sbjct: 179 MQEWRCK----PNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACG 234
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
+ + L +++ + +I N ++ AF Q KA+ F+ +K K PD
Sbjct: 235 AAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTC 294
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVV--PDFISYNTLLNNLRKIRRLDLCLIYFR 197
T NIV+ L ++G + + F SM+E PD ++Y +++ + + + C F
Sbjct: 295 TMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFD 354
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M G++P++++Y AL+ ++ G E+L F +KQ +RP I Y SL++ +
Sbjct: 355 IMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSA 414
Query: 258 KVDLAMTIFEEM 269
+ + A +F EM
Sbjct: 415 QPEKAREVFNEM 426
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 88/167 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ ++ A+ +S Q EKA +F+ ++ CKP+ ++YN ++D G G + + ++
Sbjct: 400 IVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLH 459
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M++ G+ PD IS +TLL + ++L I GI+ + + Y + I S+ G
Sbjct: 460 EMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLG 519
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++L L+ M+ ++P Y LI K+G+ ++ FE+M
Sbjct: 520 DYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDM 566
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 109 IIFAFAKSRQIE--------------------KALLIFDHIKGLKCKPDLITYNIVLDIL 148
II A AKSR I+ KAL+++ ++ KPD +TYNI++
Sbjct: 491 IILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGS 550
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
++GR + L F M + + Y++++ + K +L F M E+G PD+
Sbjct: 551 CKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDV 610
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
LTYT LI ++ G+ + LF +M+ +P V SL++ L K G+ + + + E
Sbjct: 611 LTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEF 670
Query: 269 M 269
M
Sbjct: 671 M 671
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A+ ++++A +F ++ +CKP+ TYN ++ R G+ +N M+ A
Sbjct: 159 MIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAA 218
Query: 169 VVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ P +YN ++N N +K L+LC ++M E+G+ PDL+T+ ++ +F
Sbjct: 219 IPPSRTTYNNVINACGAAGNWKKA--LELC----KKMTENGVGPDLITHNIVLSAFKNGA 272
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ F MK ++ P +I L K+G A+ +F M
Sbjct: 273 QYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSM 319
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ E+ Q +I ++ ++ A + +Q+ K +I K + + + YN +
Sbjct: 457 LLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYL 516
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+G L + SM+ V PD ++YN L++ K+ R L +F +M + I
Sbjct: 517 SLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKE 576
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+++I S+ + G + E+ FN MK+ P + Y +LI G A +F+EM
Sbjct: 577 VYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEM 636
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 123/296 (41%), Gaps = 38/296 (12%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC 70
G+ A+ L S+R N+ P+A YN ++ S + S + +D+L + L+ +
Sbjct: 519 GDYKKALVLYTSMRAGNV-KPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEV 577
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y++ +++ T+ + + ++ +I A++ +A +F ++
Sbjct: 578 YSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEME 637
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV----------------VPDF- 173
+PD I + +++ L + G+ +L MK+ + + D+
Sbjct: 638 NNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWK 697
Query: 174 ---------------ISYNTL---LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
IS+ TL LN L K R + + F +M S L TYT L+
Sbjct: 698 TASQIIEHLDSSLSSISFGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTVGLSTYTILL 757
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ G + + + M+ + P++Y+Y+S++ + + +D + E++N+
Sbjct: 758 RNLLIVGKWRKYVEVLQWMEDAGVCPTLYMYQSVLPYIWRDNSMDYVTLMQEKINA 813
>gi|341605747|gb|AEK82976.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605749|gb|AEK82977.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605751|gb|AEK82978.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|302821834|ref|XP_002992578.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
gi|300139647|gb|EFJ06384.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
Length = 427
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 17/275 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+E LC+ G VS A +LL+ +++K+ F P+A + VL E +D + + +++
Sbjct: 149 LEILCRCGRVSDAWKLLRMMKEKH-FKPDAVPHTYVLRKFCEAGRLDEALKGFEEM---- 203
Query: 64 RTLSSDCYTNFARAFIMTDD-CTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSR 117
T + C +F ++ D C+ + F+E++V + ++ + +K R
Sbjct: 204 -TGNEKCEPDFVTYSVIVDGLCSAQRLDDAWKFMEKMVAKGRMPDVRTFRSLVESHSKPR 262
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+E + D G + KP Y ++L L R GR + + + + P F++Y
Sbjct: 263 LVEDRGKLED---GKRAKPTATMYTLLLYGLLRKGRAGEAMELYQQVLSGSTRPSFLTYW 319
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ L K R F +M + P +TY ALI R G +E +L LF +M Q+
Sbjct: 320 VIIDGLGKAGRGLEADEVFSDMIRGDVSPQTVTYNALISGLCRVGRVERALELFREMPQR 379
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ RP Y +L+D + K + D A+T+ E + S
Sbjct: 380 ECRPDAATYGALLDGICKAERADDAVTLLREASES 414
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 12/260 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N +E L + G A + + R +F PNA Y ++ + ID + ++ ++
Sbjct: 6 NQLLETLVRCGRSMDAYGIFKQ-RFSRMFKPNAFTYTVLVRGLCDAGRIDEACEVFNEMQ 64
Query: 61 ----VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ ++T N DD ++E Q P+S + +I+ ++
Sbjct: 65 GRGGIEAKTAIYSVLLNGLLRSGKLDDAFSYYQMMQETCQ---PDSS-TYSTMIYELSRQ 120
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++ A + + PD+ + L+IL R GRV+D MKE PD + +
Sbjct: 121 GRLDHATKVAQEMVDKDKIPDMPCLGVALEILCRCGRVSDAWKLLRMMKEKHFKPDAVPH 180
Query: 177 NTLLNNLRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+L + RLD L F EM G +PD +TY+ ++D ++++ + M
Sbjct: 181 TYVLRKFCEAGRLDEALKGFEEMTGNEKCEPDFVTYSVIVDGLCSAQRLDDAWKFMEKMV 240
Query: 236 QQQIRPSIYVYRSLIDNLKK 255
+ P + +RSL+++ K
Sbjct: 241 AKGRMPDVRTFRSLVESHSK 260
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKC-KPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
++ + +I++A +F+ ++G + Y+++L+ L R G+++D + + M+E
Sbjct: 43 LVRGLCDAGRIDEACEVFNEMQGRGGIEAKTAIYSVLLNGLLRSGKLDDAFSYYQMMQET 102
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
PD +Y+T++ L + RLD +EM + PD+ ++ R G + ++
Sbjct: 103 -CQPDSSTYSTMIYELSRQGRLDHATKVAQEMVDKDKIPDMPCLGVALEILCRCGRVSDA 161
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+L MK++ +P + ++ + G++D A+ FEEM +
Sbjct: 162 WKLLRMMKEKHFKPDAVPHTYVLRKFCEAGRLDEALKGFEEMTGN 206
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+PD TY+ ++ L R GR++ M + +PD L L + R+
Sbjct: 103 CQPDSSTYSTMIYELSRQGRLDHATKVAQEMVDKDKIPDMPCLGVALEILCRCGRVSDAW 162
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK-QQQIRPSIYVYRSLIDN 252
R M E KPD + +T ++ F G ++E+L+ F +M ++ P Y ++D
Sbjct: 163 KLLRMMKEKHFKPDAVPHTYVLRKFCEAGRLDEALKGFEEMTGNEKCEPDFVTYSVIVDG 222
Query: 253 LKKMGKVDLAMTIFEEM 269
L ++D A E+M
Sbjct: 223 LCSAQRLDDAWKFMEKM 239
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D+ + N +L+ L R GR D F P+ +Y L+ L R+D F
Sbjct: 1 DITSANQLLETLVRCGRSMDAYGIFKQRFSRMFKPNAFTYTVLVRGLCDAGRIDEACEVF 60
Query: 197 REM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
EM G GI+ Y+ L++ R+G ++++ + M Q+ +P Y ++I L +
Sbjct: 61 NEMQGRGGIEAKTAIYSVLLNGLLRSGKLDDAFSYYQ-MMQETCQPDSSTYSTMIYELSR 119
Query: 256 MGKVDLAMTIFEEM 269
G++D A + +EM
Sbjct: 120 QGRLDHATKVAQEM 133
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMK-EAGVVPDFISYNTLLNNLRKIRRLDLCL 193
KP+ TY +++ L GR+++ F M+ G+ Y+ LLN L + +LD
Sbjct: 34 KPNAFTYTVLVRGLCDAGRIDEACEVFNEMQGRGGIEAKTAIYSVLLNGLLRSGKLDDAF 93
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
Y++ M E+ +PD TY+ +I R G ++ + ++ +M + P + ++ L
Sbjct: 94 SYYQMMQET-CQPDSSTYSTMIYELSRQGRLDHATKVAQEMVDKDKIPDMPCLGVALEIL 152
Query: 254 KKMGKVDLAMTIFEEMN 270
+ G+V A + M
Sbjct: 153 CRCGRVSDAWKLLRMMK 169
>gi|297789717|ref|XP_002862796.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
lyrata]
gi|297308523|gb|EFH39054.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 114/235 (48%), Gaps = 2/235 (0%)
Query: 31 FLPNAYNCV--LVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
F P+ C+ +++ + N + F +++++ + YT AF + +L
Sbjct: 143 FGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 202
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+++ ++ ++ + +I FAK +++ AL + D +K D++ YN+ +D
Sbjct: 203 ALFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 262
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G+VG+V+ F ++ G+ PD ++Y +++ L K RLD + F + ++ P
Sbjct: 263 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 322
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
Y +I +G G +E+ L + + PS+ Y ++ L+KMGKVD A+
Sbjct: 323 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 377
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 114/242 (47%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P +YN +L+ A + D QIL ++ V+ S + + + + + ++
Sbjct: 112 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQ 171
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ + + +I AF+ + L +F ++ L +P + + ++ + G
Sbjct: 172 NMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLALFQQMQELGYEPTVHLFTTLIRGFAKEG 231
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
RV+ L+ MK + + D + YN +++ K+ ++D+ +F E+ +G+KPD +TYT
Sbjct: 232 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 291
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++I + ++E++ +F +++ + P Y Y ++I GK D A ++ E +
Sbjct: 292 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 351
Query: 273 LS 274
S
Sbjct: 352 GS 353
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
+YN +L ++ R + + M AG P + ++ + K +L + M
Sbjct: 114 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 173
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ +P YT LI +F + + L LF M++ P+++++ +LI K G+V
Sbjct: 174 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLALFQQMQELGYEPTVHLFTTLIRGFAKEGRV 233
Query: 260 DLAMTIFEEMNSSLSD 275
D A+++ +EM SS D
Sbjct: 234 DSALSLLDEMKSSSLD 249
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
EV+ P I N ++ F K+ + A L+FD I +P ++++N ++ + G
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V + M+ GV PD +++ L+N L K RLD + F EM G+ P+ +T+T
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LID + G ++ +L+ F M Q +RP + Y +LI+ L K+G + A + EM +S
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 101/194 (52%)
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
F D + +E+ + +++ N +I KS +E+ + ++
Sbjct: 256 HGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVC 315
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ T++ +++ L + GR+++ F M G+VP+ +++ TL++ K ++DL L
Sbjct: 316 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKN 375
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F+ M G++PDL+TY ALI+ + G+++E+ RL N+M ++P + +LID K
Sbjct: 376 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCK 435
Query: 256 MGKVDLAMTIFEEM 269
G ++ A+ I M
Sbjct: 436 DGDMESALEIKRRM 449
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 15/277 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + CKAG+V A RL+ K P ++N ++ ++ D++ F+ LK ++
Sbjct: 252 NVLMHGFCKAGDVGNA-RLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFR-LKGVM 309
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQ------LLIFIEEVVQIASPESIIVVNRIIFAFA 114
S C F + ++ C + L+F E + P + +I
Sbjct: 310 ESEGV----CPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTT-LIDGQC 364
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K +++ AL F + +PDL+TYN +++ L +VG + + M +G+ PD I
Sbjct: 365 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKI 424
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++ TL++ K ++ L R M E GI+ D + +TALI R G + ++ R+ DM
Sbjct: 425 TFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDM 484
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P Y +ID K G V + + +EM S
Sbjct: 485 LSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQS 521
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ + +I K ++++ L+FD + G P+ +T+ ++D + G+V+ L F
Sbjct: 318 VFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQ 377
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M GV PD ++YN L+N L K+ L EM SG+KPD +T+T LID + G
Sbjct: 378 MMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDG 437
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++E +L + M ++ I + +LI L + G+V A + +M S+
Sbjct: 438 DMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSA 487
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 105/274 (38%), Gaps = 4/274 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G + L + + + +PN + ++ + +DL+ + + +L
Sbjct: 325 INGLCKEGRLDEGSLLFDEMCGRGL-VPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQG 383
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y D + + E+ I +I K +E AL
Sbjct: 384 VRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESAL 443
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + D + + ++ L R GRV+D M AG PD +Y +++
Sbjct: 444 EIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCF 503
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + +EM G P ++TY AL++ + G ++ + L + M + P+
Sbjct: 504 CKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPND 563
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
Y L+D K G + + IF ++D A
Sbjct: 564 ITYNILLDGHSKHGS-SVDVDIFNSEKGLVTDYA 596
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 4/184 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK G++ +A+ + + + ++ I L + A+ ++ + + ++L D+L +
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
YT F D ++E+ ++ N ++ K Q++ A +
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKM 549
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + + P+ ITYNI+LD + G D ++ F S E G+V D+ SY L+N
Sbjct: 550 LLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNS--EKGLVTDYASYTALVNESS 606
Query: 185 KIRR 188
K +
Sbjct: 607 KTSK 610
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 96/226 (42%), Gaps = 16/226 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G++ A RL+ + + P+ + ++ + D++ + +I + ++
Sbjct: 392 NALINGLCKVGDLKEARRLVNEMTASGL-KPDKITFTTLIDGCCKDGDMESALEIKRRMV 450
Query: 61 VSSRTLSSDCYT----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
L +T R + D L + + P +V++ F K
Sbjct: 451 EEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVID----CFCKK 506
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ + ++ P ++TYN +++ L + G++ + +M GV P+ I+Y
Sbjct: 507 GDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITY 566
Query: 177 NTLLNNLRKI-RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
N LL+ K +D+ + E G+ D +YTAL++ +T
Sbjct: 567 NILLDGHSKHGSSVDVDIFN----SEKGLVTDYASYTALVNESSKT 608
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 10/275 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA----SAETNDIDLSFQIL 56
N I KAG + A++L +R PN YN V+ A A ++ F+ +
Sbjct: 310 NNLINIFGKAGRLEDALKLFDQMRSLKC-APNVVTYNTVIKALFESKAPASEAASWFEKM 368
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K + T SS Y+ F T+ + L+ +EE+ + P +I A K+
Sbjct: 369 K---ANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 425
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ E A +F +K + Y +++ LG+ GR ++ ++ F MK+ G PD +Y
Sbjct: 426 KRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAY 485
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L++ L + ++ R M E+G PDL ++ +++ RTG E++ +F MK
Sbjct: 486 NALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKD 545
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I+P Y +++ +L + G + A + EM S
Sbjct: 546 SLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGS 580
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 108/197 (54%), Gaps = 14/197 (7%)
Query: 82 DDCT---QLLIFIEEVVQIASPESIIV---VNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
DDC ++ I+E+V+ SP +I ++ ++ K++ + KAL +F IK KCK
Sbjct: 106 DDCGLFGEMWKMIQEMVR--SPTCVIGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCK 163
Query: 136 PDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
P TYN ++ +L G +++++ +E + E PD ++Y+ L++ K+ R D
Sbjct: 164 PTASTYNSMILMLMQEGHHEKIHELYHEMCN--EGDCFPDTMTYSVLVSAFVKLGRDDYA 221
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ F EM +G+ P YT L+ + ++G+ E++L L +MK + P+++ Y LI
Sbjct: 222 IRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIKG 280
Query: 253 LKKMGKVDLAMTIFEEM 269
L K G+V+ A ++F M
Sbjct: 281 LGKSGRVEDAYSVFLNM 297
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 38/212 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV-GRVNDMLNEF 161
++++N +I F K+ ++E AL +FD ++ LKC P+++TYN V+ L ++ + F
Sbjct: 306 VVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWF 365
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK GV P +Y+ L++ K R++ L+ EM E G P Y +LI++ G+
Sbjct: 366 EKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 425
Query: 222 -----------------------------------GNIEESLRLFNDMKQQQIRPSIYVY 246
G E++ LFN+MK+ P +Y Y
Sbjct: 426 KRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAY 485
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
+L+ L + G ++ A + M N DL
Sbjct: 486 NALMSGLVRAGMIEEAFSALRTMEENGCTPDL 517
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKAL + +K C P + TY ++ LG+ GRV D + F +M + G PD + N L
Sbjct: 253 EKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNL 312
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS-FGRTGNIEESLRLFNDMKQQQ 238
+N K RL+ L F +M P+++TY +I + F E+ F MK
Sbjct: 313 INIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANG 372
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ PS + Y LID K +V+ A+ + EEM+
Sbjct: 373 VTPSSFTYSILIDGFCKTNRVEKALLLLEEMD 404
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK V A+ LL+ + +K P AY ++ A + + + ++ +L +
Sbjct: 384 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCG 443
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S+ Y + ++ + E+ +I + N ++ ++ IE+A
Sbjct: 444 RSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFS 503
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
++ C PDL ++NI+L+ L R GR F MK++ + PD +SYNT+L +L
Sbjct: 504 ALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLS 563
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ + REMG G + D +TY++++++ G+ +E
Sbjct: 564 RSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 137 DLITYNIV---LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
DL TY + LD G G + M+ E + P +S ++ L K + ++ L
Sbjct: 94 DLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLS--EVVKILGKAKMVNKAL 151
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSLIDN 252
F ++ KP TY ++I + G+ E+ L+++M + P Y L+
Sbjct: 152 SVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSA 211
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
K+G+ D A+ +F+EM ++
Sbjct: 212 FVKLGRDDYAIRLFDEMKAN 231
>gi|356575965|ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 1 [Glycine max]
gi|356575967|ref|XP_003556107.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 2 [Glycine max]
Length = 480
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 95/172 (55%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P I+ N +++A + ++++ + D + PD T+NI+L +LG+ + LN
Sbjct: 258 PSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALN 317
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
M+E G+ P + + TL++ L + LD C +F EM ++ +PD++ YT +I +
Sbjct: 318 LLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNECRPDVVAYTVMITGYV 377
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G IE++L ++ DM ++ P+++ Y S+I L GK D A ++ +EM +
Sbjct: 378 VAGEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEACSMLKEMET 429
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
L ++E+++ P + N +I ++ + + F K +P +YN +L
Sbjct: 175 LWRLVDEMIEKGLPATARTFNILIRTCGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILH 234
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L + + + + M G D ++YN ++ ++ +LD EMG +G P
Sbjct: 235 GLLVLNQYKLIEWVYQQMLLDGFPSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSP 294
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D T+ L+ G+ +L L N M++ I P++ + +LID L + G +D F
Sbjct: 295 DFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFF 354
Query: 267 EEM 269
+EM
Sbjct: 355 DEM 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 75/167 (44%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ K + AL + +H++ + +P ++ + ++D L R G ++ F M +
Sbjct: 300 NILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIK 359
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
PD ++Y ++ ++ L +++M P++ TY ++I G +E
Sbjct: 360 NECRPDVVAYTVMITGYVVAGEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDE 419
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ + +M+ + P+ VY +L L+ GK A + +M +
Sbjct: 420 ACSMLKEMETKGCSPNSVVYNTLASCLRNAGKTADAHEVIRQMTEKV 466
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I N +I A +++ +E+A +FD ++ C+PDL TYN ++ + GR G F
Sbjct: 327 ITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFND 386
Query: 164 MKEAGVVPDFISYNTLL------NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
++ G PD +SYN+LL N+ K++ + + EM + G D +TY +I
Sbjct: 387 LESRGFFPDAVSYNSLLYAFAREGNVEKVKEI------WEEMVKIGFGKDEMTYNTMIHM 440
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+G+ G E +L+L+ DM+ P Y LID+L K K+ A + EM
Sbjct: 441 YGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEM 492
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 11/185 (5%)
Query: 93 EVVQIASPE---SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
EV A P ++ V N ++ +A+ + K + D ++ CKPDL+++N +++
Sbjct: 241 EVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARL 300
Query: 150 RVGRVN-----DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+ G + ++LNE ++ +G+ PD I+YNTL++ + L+ F +M
Sbjct: 301 KAGAMMPNLAIELLNE---VRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHC 357
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+PDL TY A+I +GR G ++ +LFND++ + P Y SL+ + G V+
Sbjct: 358 QPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKE 417
Query: 265 IFEEM 269
I+EEM
Sbjct: 418 IWEEM 422
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 88/166 (53%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N +++AFA+ +EK I++ + + D +TYN ++ + G+ G+ L +
Sbjct: 397 VSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRD 456
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ +G PD ++Y L+++L K ++ EM +G+KP L TY+ALI + + G
Sbjct: 457 MQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGK 516
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+ F+ M + IRP Y ++D + + AMT+++EM
Sbjct: 517 PVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEM 562
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD----LITYNIVLDILGRVGRVNDMLNE 160
+++ I+ K+ Q A+ +F ++ +P + YN ++ + R GR N +
Sbjct: 222 MLSTILSVLGKANQEALAVEVF-----MRAEPSAGNTVQVYNAMMGVYARRGRFNKVQEL 276
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRL--DLCLIYFREMGESGIKPDLLTYTALIDSF 218
M+E G PD +S+NTL+N K + +L + E+ SG++PD +TY LI +
Sbjct: 277 LDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISAC 336
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
R N+EE+ ++F+DM+ +P ++ Y ++I + G A +F ++ S
Sbjct: 337 SRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLES 389
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 113/239 (47%), Gaps = 6/239 (2%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
+N ++ A A + + + I ++ + + D +A I+ +L + ++E+
Sbjct: 816 WNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQ 875
Query: 96 QIA---SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ S SI++ ++ AFA++ I + I+ +K P + Y ++ +L R
Sbjct: 876 DMGFKISKSSILL---MLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGK 932
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+V D+ + M+EAG PD +N++L I + ++ + E G++PD TY
Sbjct: 933 QVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYN 992
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LI + R EE L ++M+ + P + Y+SL+ + K V+ A +FEE+ S
Sbjct: 993 TLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQS 1051
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 7/262 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +A N+ A ++ + + P+ YN ++ + Q+ DL
Sbjct: 330 NTLISACSRASNLEEAAKVFDDMEAHHC-QPDLWTYNAMISVYGRCGLSGKAEQLFNDL- 387
Query: 61 VSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
SR D Y + AF + ++ EE+V+I + + N +I + K Q
Sbjct: 388 -ESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQ 446
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
E AL ++ ++ PD +TY +++D LG+ ++ + + M GV P +Y+
Sbjct: 447 NELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSA 506
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ K + F M SGI+PD L Y+ ++D R + ++ L+ +M
Sbjct: 507 LICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDG 566
Query: 239 IRPSIYVYRSLIDNLKKMGKVD 260
I +Y ++ L+K+ KV+
Sbjct: 567 ITLDHSLYELMLRTLRKVNKVE 588
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N ++ + K + ++ IK +PD TYN ++ + R R + + M
Sbjct: 955 IWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEM 1014
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ AG+ P +Y +L+ + K + ++ F E+ G K D Y ++ + +G+
Sbjct: 1015 RVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSH 1074
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
++ RLF+ MK + P+I L+ + G+ A + + + S+L+
Sbjct: 1075 SKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLS 1127
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 67/142 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ +F K + +E+A +F+ ++ CK D Y+ ++ I G + F+ MK+AG
Sbjct: 1029 LVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAG 1088
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V P + + L+ + + + E+G L Y+++ID++ R G+ +
Sbjct: 1089 VEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGI 1148
Query: 229 RLFNDMKQQQIRPSIYVYRSLI 250
+ MK++ + P ++ I
Sbjct: 1149 QKLIQMKKEGLEPDHRIWTCFI 1170
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 73/166 (43%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ + +L+ Q+ +D+ S R + YT + T+ + + E++
Sbjct: 434 YNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEML 493
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
++ + +I +AK+ + +A FD + +PD + Y+++LDI R
Sbjct: 494 NTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPK 553
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+ + M G+ D Y +L LRK+ +++ R+M E
Sbjct: 554 RAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDMEE 599
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 72/163 (44%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I + + + E+ + ++ +P L TY ++ G+ V F ++
Sbjct: 992 NTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQS 1051
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G D Y+T++ R F M ++G++P + T L+ S+G +G +E
Sbjct: 1052 KGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQE 1111
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ +++K+ S Y S+ID + G ++ + +M
Sbjct: 1112 AEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQM 1154
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 73/164 (44%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A+ + + +KA + +++ D +N +++ G F +M G
Sbjct: 784 VIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDG 843
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P + N LL L RLD + +E+ + G K + ++D+F R GNI E
Sbjct: 844 PSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVK 903
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++++ MK P++++YR + L + +V + EM +
Sbjct: 904 KIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEA 947
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++++V+ +++ NR+I ++ ++ + A+ +F+ ++ + C+PD +TY ++DI
Sbjct: 402 LLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHA 461
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ L + M+ AG+ PD +Y+ ++N L K L F EM E G P+L+
Sbjct: 462 KAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLV 521
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N + +L+L+ DM+ +P Y +++ L G +D A +F EM
Sbjct: 522 TYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEM 581
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 85/156 (54%)
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
AK+ ++ AL ++ ++ PD TY+++++ LG+ G + F M E G VP+
Sbjct: 461 AKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNL 520
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YN ++ K R L +R+M +G +PD +TY+ +++ G G ++E+ +F++
Sbjct: 521 VTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSE 580
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
MK++ P VY L+D K G V+ A ++ M
Sbjct: 581 MKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTM 616
Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 84/160 (52%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+++Q + D + C+P+++TYN ++ GR +ND ++ F M+ G PD
Sbjct: 390 LGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPD 449
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++Y TL++ K LD L ++ M +G+ PD TY+ +I+ G+ G++ + +LF
Sbjct: 450 RVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFC 509
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M +Q P++ Y +I K A+ ++ +M S+
Sbjct: 510 EMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSA 549
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q P +++ N +I AK+R + AL ++ ++ +PD +TY+IV+++L
Sbjct: 507 LFCEMVEQGCVP-NLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVL 565
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G +++ F+ MK VPD Y L++ K ++ +++ M +G++P++
Sbjct: 566 GHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNV 625
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R + ++ L M + + PS+ Y L+
Sbjct: 626 PTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLL 667
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + C P+L+TYNI++ + + L + M+ AG
Sbjct: 491 IINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAG 550
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L LD F EM PD Y L+D +G+ GN+E++
Sbjct: 551 FQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAW 610
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M +RP++ SL+ ++ K+ A + + M
Sbjct: 611 QWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSM 651
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 117 RQIEKALLIFDHIKGLKCKP----DLITYNIVLDILGRV---GRVNDMLNEFASMKEAGV 169
+Q++ + + LK +P D TY ++ ILGR G +N +L++ M + G
Sbjct: 355 KQLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQ---MVKDGC 411
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P+ ++YN L+++ + L+ + F EM G +PD +TY LID + G ++ +L
Sbjct: 412 QPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALE 471
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ M+ + P + Y +I+ L K G + A +F EM
Sbjct: 472 MYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEM 511
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 158 LNEFASMK-EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
LN F +K + G D +Y T++ L + ++ +M + G +P+++TY LI
Sbjct: 364 LNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIH 423
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
S+GR + +++ +FN+M++ P Y +LID K G +D A+ +++ M ++
Sbjct: 424 SYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAA 479
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 148/304 (48%), Gaps = 43/304 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSF------QILKD 58
I ++G V+ A+ +L+S++ + YN V+ A + +DL F Q+L+D
Sbjct: 240 ISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGK-GGVDLRFTLGYFRQMLRD 298
Query: 59 LLVSSR----TLSSDC----YTNFARAFIMTDDCTQLLI---------FIEEVVQIASPE 101
L R +L S C + ARA D+ L I FI+ + + + E
Sbjct: 299 RLCPDRKTFNSLLSACSRAGHLEDARALF--DEMIHLGIGRDIYTYNTFIDAICKCGNIE 356
Query: 102 ----------------SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+++ + +I ++K + ++AL +++ +K L + D + YN VL
Sbjct: 357 LAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVL 416
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
I + G+ ++ M+++G+ D ++YN+L+N K RLD+ ++M G+
Sbjct: 417 AIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVA 476
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P +LTY+ LID + + G ++ ++ D K+ ++P + ++ S ID L K G V+ A+++
Sbjct: 477 PSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSL 536
Query: 266 FEEM 269
+M
Sbjct: 537 LNDM 540
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 1/171 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNE 160
++ + +I A+A+S + +A+ + + +KG +P +TYN V+D G+ G + L
Sbjct: 232 TVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGY 291
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M + PD ++N+LL+ + L+ F EM GI D+ TY ID+ +
Sbjct: 292 FRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICK 351
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
GNIE ++++ DM+ + ++P++ Y +LID K+ K D A+ ++E+M S
Sbjct: 352 CGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKS 402
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 135/313 (43%), Gaps = 47/313 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I+ +CK GN+ A+++L + KN+ PN Y+ ++ ++ D + ++ + +
Sbjct: 343 NTFIDAICKCGNIELAMQVLLDMEAKNV-KPNVVTYSTLIDGYSKLEKYDEALKLYEKMK 401
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L CY ++ ++ I +E+ + + N +I + K +++
Sbjct: 402 SLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLD 461
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ ++ P ++TY+ ++DI + G D N + KE+G+ PD + +++ +
Sbjct: 462 IVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFI 521
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES------------- 227
+ L K ++ L +M E GIKP+++TY +ID+FG++ + E
Sbjct: 522 DTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAGEMGIVGVY 581
Query: 228 -------------------------------LRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
L LF M QQ +RP++ + ++++ +
Sbjct: 582 NGQIIRAANPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSAILNACSRC 641
Query: 257 GKVDLAMTIFEEM 269
+ A + E++
Sbjct: 642 NNFEDAALLLEQL 654
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 110/220 (50%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN + A + +I+L+ Q+L D+ + + Y+ + + + L E++
Sbjct: 342 YNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMK 401
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + N ++ + K+ + + ++ D ++ + D +TYN +++ G+ GR++
Sbjct: 402 SLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLD 461
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ M+ GV P ++Y+TL++ K + + ESG+KPD++ +++ I
Sbjct: 462 IVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFI 521
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
D+ + G +E +L L NDM + I+P++ Y ++ID K
Sbjct: 522 DTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGK 561
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L K+ R DL F G + +ALI ++ R+G + E++ + MK +
Sbjct: 205 IGALGKMSRPDLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGL 264
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTI--FEEM 269
RP+ Y ++ID K G VDL T+ F +M
Sbjct: 265 RPTTVTYNAVIDACGK-GGVDLRFTLGYFRQM 295
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+V+ + + NR+I ++ ++ + +A+ +F+ ++ CKPD +TY ++DI
Sbjct: 503 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 562
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+ G+ PD +Y+ ++N L K L F EM + G P+L+
Sbjct: 563 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 622
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY ++D + N + +L+L+ DM+ P Y +++ L G ++ A +F EM
Sbjct: 623 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 682
Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 85/160 (53%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+++Q + D + C+P+ +TYN ++ GR +N+ +N F M+EAG PD
Sbjct: 491 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 550
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++Y TL++ K LD+ + ++ M G+ PD TY+ +I+ G+ G++ + +LF
Sbjct: 551 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 610
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M Q P++ Y ++D K A+ ++ +M ++
Sbjct: 611 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 650
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 79/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + C P+L+TYNI++D+ + + L + M+ AG
Sbjct: 592 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 651
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM + PD Y L+D +G+ GN+E++
Sbjct: 652 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 711
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M +RP++ SL+ ++ K+ A + + M
Sbjct: 712 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 752
Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q +P +++ N ++ AK+R + AL ++ ++ +PD +TY+IV+++L
Sbjct: 608 LFCEMVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 666
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + F M++ +PD Y L++ K ++ +++ M +G++P++
Sbjct: 667 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV 726
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R I E+ L +M +RPS+ Y L+
Sbjct: 727 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 768
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 135 KPDLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
K D TY ++ LGR G +N +L+E M G P+ ++YN L+++ + L+
Sbjct: 478 KHDGHTYTTMVGNLGRAKQFGAINKLLDE---MVRDGCQPNTVTYNRLIHSYGRANYLNE 534
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ F +M E+G KPD +TY LID + G ++ ++ ++ M+ + P + Y +I+
Sbjct: 535 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 594
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K G + A +F EM
Sbjct: 595 CLGKAGHLPAAHKLFCEM 612
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 58/107 (54%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ NL + ++ EM G +P+ +TY LI S+GR +
Sbjct: 473 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 532
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
E++ +FN M++ +P Y +LID K G +D+AM +++ M +
Sbjct: 533 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 579
Score = 38.1 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+ G K D TYT ++ + GR +L ++M + +P+ Y LI + + ++
Sbjct: 474 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 533
Query: 261 LAMTIFEEMNSS 272
AM +F +M +
Sbjct: 534 EAMNVFNQMQEA 545
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+V+ + + NR+I ++ ++ + +A+ +F+ ++ CKPD +TY ++DI
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+ G+ PD +Y+ ++N L K L F EM + G P+L+
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY ++D + N + +L+L+ DM+ P Y +++ L G ++ A +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 85/160 (53%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+++Q + D + C+P+ +TYN ++ GR +N+ +N F M+EAG PD
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++Y TL++ K LD+ + ++ M G+ PD TY+ +I+ G+ G++ + +LF
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M Q P++ Y ++D K A+ ++ +M ++
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 79/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + C P+L+TYNI++D+ + + L + M+ AG
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM + PD Y L+D +G+ GN+E++
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M +RP++ SL+ ++ K+ A + + M
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q +P +++ N ++ AK+R + AL ++ ++ +PD +TY+IV+++L
Sbjct: 491 LFCEMVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + F M++ +PD Y L++ K ++ +++ M +G++P++
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV 609
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R I E+ L +M +RPS+ Y L+
Sbjct: 610 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 135 KPDLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
K D TY ++ LGR G +N +L+E M G P+ ++YN L+++ + L+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDE---MVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ F +M E+G KPD +TY LID + G ++ ++ ++ M+ + P + Y +I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K G + A +F EM
Sbjct: 478 CLGKAGHLPAAHKLFCEM 495
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 58/107 (54%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ NL + ++ EM G +P+ +TY LI S+GR +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
E++ +FN M++ +P Y +LID K G +D+AM +++ M +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Score = 38.1 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+ G K D TYT ++ + GR +L ++M + +P+ Y LI + + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 261 LAMTIFEEMNSS 272
AM +F +M +
Sbjct: 417 EAMNVFNQMQEA 428
>gi|341605803|gb|AEK83004.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605805|gb|AEK83005.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605823|gb|AEK83014.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEE 186
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY +V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILIXGMFK 205
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 96/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ E+V+ +++ NR+I ++ ++ + +A+ +FD ++ C+PD +TY ++DI
Sbjct: 410 LLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHA 469
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ L+ + M+EA + PD +Y+ ++N L K L F EM + G P+L+
Sbjct: 470 KAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLV 529
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N +L L+ DM+ +P Y +++ L G ++ A IF EM
Sbjct: 530 TYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEM 589
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 80/139 (57%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+P+++TYN ++ GR +N+ ++ F M+EAG PD ++Y TL++ K LD+ L
Sbjct: 419 CQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVAL 478
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+++M E+ + PD TY+ +I+ G+ G++ + +LF +M Q P++ Y +I
Sbjct: 479 HMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQ 538
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K A+ ++ +M ++
Sbjct: 539 AKARNYPTALELYRDMQNA 557
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 135 KPDLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
K D TY ++ ILGR G +N +L E M G P+ ++YN L+++ + L+
Sbjct: 385 KHDGHTYTTMVGILGRARQFGAINKLLAE---MVRDGCQPNVVTYNRLIHSYGRANYLNE 441
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ F M E+G +PD +TY LID + G ++ +L ++ M++ + P + Y +I+
Sbjct: 442 AVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIIN 501
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K G + A +F EM
Sbjct: 502 CLGKAGHLTSAHKLFCEM 519
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q P +++ N +I AK+R AL ++ ++ +PD +TY+IV+++L
Sbjct: 515 LFCEMVDQGCVP-NLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVL 573
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + F MK VPD Y L++ K+ ++ +++ M +G+ P++
Sbjct: 574 GHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNV 633
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R + ++ L M + ++PS+ Y L+
Sbjct: 634 PTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLL 675
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + C P+L+TYNI++ + + L + M+ AG
Sbjct: 499 IINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAG 558
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM PD Y L+D +G+ GN+E+S
Sbjct: 559 FQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSW 618
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + P++ SL+ ++ ++ A + + M
Sbjct: 619 EWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSM 659
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ L + R+ EM G +P+++TY LI S+GR +
Sbjct: 380 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYL 439
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ +F+ M++ +P Y +LID K G +D+A+ ++++M +
Sbjct: 440 NEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEA 487
>gi|399107200|gb|AFP20364.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|341605725|gb|AEK82965.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHXM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHXM 78
>gi|341605743|gb|AEK82974.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605753|gb|AEK82979.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605831|gb|AEK83018.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|242038361|ref|XP_002466575.1| hypothetical protein SORBIDRAFT_01g010260 [Sorghum bicolor]
gi|241920429|gb|EER93573.1| hypothetical protein SORBIDRAFT_01g010260 [Sorghum bicolor]
Length = 771
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 84 CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL--KCKPDLITY 141
C EE+ + P ++ + N I AF K RQ+ +L +F +K PD+ TY
Sbjct: 206 CDDFRYVFEELSRRGLPSNVRLYNICIHAFGKWRQLGMSLRLFAAMKAATPPVSPDICTY 265
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM-G 200
N V+ L RV D L F MK +G+ PD +Y ++N K R+D L F+EM G
Sbjct: 266 NSVIRALVVGARVPDALVIFDEMKSSGIEPDVFTYRAVMNGCCKSFRMDDALRVFQEMRG 325
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
SG+K D++ Y +L+D + ++E+ F M I+ S + +LID L K G+ +
Sbjct: 326 SSGVKSDVVVYNSLLDGLFKAKKLDEACGFFETMVADGIQCSASTHNTLIDGLFKNGRAE 385
Query: 261 LAMTIFEEM 269
A +F E+
Sbjct: 386 AACRLFYEL 394
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 4/183 (2%)
Query: 91 IEEVVQIAS-PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
I ++ IAS P + NR++ A +K + +F+ + ++ YNI + G
Sbjct: 177 IRRLLPIASQPPPVRATNRLLLALSKENLCDDFRYVFEELSRRGLPSNVRLYNICIHAFG 236
Query: 150 RVGRVNDMLNEFASMKEA--GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ ++ L FA+MK A V PD +YN+++ L R+ L+ F EM SGI+PD
Sbjct: 237 KWRQLGMSLRLFAAMKAATPPVSPDICTYNSVIRALVVGARVPDALVIFDEMKSSGIEPD 296
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMK-QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ TY A+++ ++ ++++LR+F +M+ ++ + VY SL+D L K K+D A F
Sbjct: 297 VFTYRAVMNGCCKSFRMDDALRVFQEMRGSSGVKSDVVVYNSLLDGLFKAKKLDEACGFF 356
Query: 267 EEM 269
E M
Sbjct: 357 ETM 359
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+L ++ SP+ I N +I A ++ AL+IFD +K +PD+ TY V+
Sbjct: 246 RLFAAMKAATPPVSPD-ICTYNSVIRALVVGARVPDALVIFDEMKSSGIEPDVFTYRAVM 304
Query: 146 DILGRVGRVNDMLNEFASMK-EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+ + R++D L F M+ +GV D + YN+LL+ L K ++LD +F M GI
Sbjct: 305 NGCCKSFRMDDALRVFQEMRGSSGVKSDVVVYNSLLDGLFKAKKLDEACGFFETMVADGI 364
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+ T+ LID + G E + RLF +++++
Sbjct: 365 QCSASTHNTLIDGLFKNGRAEAACRLFYELRRK 397
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 86/182 (47%)
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++T +D + F+ + E + + + N ++ +F K ++
Sbjct: 568 MGAKTFDADMINTYLSIFLAKGKLSVACKLFEIFTNLGNKGTSYTYNSLMTSFVKKGYLK 627
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ I G C D+ TYN+++ LG++G+ + + GV D + YNTL+
Sbjct: 628 QVWAILHERGGQLCPNDVATYNLIIQGLGQMGKAEVASTIIDRLSKKGVYMDIVMYNTLI 687
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K+ +++ F ++ SG+KPD++T+ LI+ + G ++E+ + M + I
Sbjct: 688 NQLGKVGKVEEAGCLFEQIIRSGMKPDVVTFNTLININAKAGRLKEADKYLRRMITEGIA 747
Query: 241 PS 242
P+
Sbjct: 748 PN 749
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 108/243 (44%), Gaps = 6/243 (2%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEE 93
YN + A + + +S ++ + ++ +S D Y + RA ++ L+ +E
Sbjct: 228 YNICIHAFGKWRQLGMSLRLFAAMKAATPPVSPDICTYNSVIRALVVGARVPDALVIFDE 287
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK-CKPDLITYNIVLDILGRVG 152
+ + ++ KS +++ AL +F ++G K D++ YN +LD L +
Sbjct: 288 MKSSGIEPDVFTYRAVMNGCCKSFRMDDALRVFQEMRGSSGVKSDVVVYNSLLDGLFKAK 347
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++++ F +M G+ ++NTL++ L K R + F E+ G D + Y+
Sbjct: 348 KLDEACGFFETMVADGIQCSASTHNTLIDGLFKNGRAEAACRLFYELRRKGQLLDGIAYS 407
Query: 213 ALIDSFGRTG---NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ F + G + E++ L +M+QQ + SL+ K + DL I + +
Sbjct: 408 IMVREFCKEGMGDQVAEAVELVKEMEQQGFSVDLVTITSLLIGFDKSKRWDLEEQIVKFI 467
Query: 270 NSS 272
S
Sbjct: 468 RGS 470
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
N Y + +A + + F+I +L +S Y + +F+ Q+ + E
Sbjct: 579 NTYLSIFLAKGKLSVACKLFEIFTNL---GNKGTSYTYNSLMTSFVKKGYLKQVWAILHE 635
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
P + N II + + E A I D + D++ YN +++ LG+VG+
Sbjct: 636 RGGQLCPNDVATYNLIIQGLGQMGKAEVASTIIDRLSKKGVYMDIVMYNTLINQLGKVGK 695
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V + F + +G+ PD +++NTL+N K RL Y R M GI P+ T T
Sbjct: 696 VEEAGCLFEQIIRSGMKPDVVTFNTLININAKAGRLKEADKYLRRMITEGIAPNYATETI 755
Query: 214 LI 215
LI
Sbjct: 756 LI 757
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P + N +L L + +D F + G+ + YN ++ K R+L + L
Sbjct: 188 PPVRATNRLLLALSKENLCDDFRYVFEELSRRGLPSNVRLYNICIHAFGKWRQLGMSLRL 247
Query: 196 FREM--GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
F M + PD+ TY ++I + + ++L +F++MK I P ++ YR++++
Sbjct: 248 FAAMKAATPPVSPDICTYNSVIRALVVGARVPDALVIFDEMKSSGIEPDVFTYRAVMNGC 307
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K ++D A+ +F+EM S
Sbjct: 308 CKSFRMDDALRVFQEMRGS 326
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN+L+ + K L E G D+ TY +I G+ G E + + + +
Sbjct: 612 TYNSLMTSFVKKGYLKQVWAILHERGGQLCPNDVATYNLIIQGLGQMGKAEVASTIIDRL 671
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + I +Y +LI+ L K+GKV+ A +FE++
Sbjct: 672 SKKGVYMDIVMYNTLINQLGKVGKVEEAGCLFEQI 706
>gi|341606955|gb|AEK83580.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 206
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 135
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 136 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 180
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 38 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 97
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 98 GRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 157
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 158 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 2 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 108
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID K
Sbjct: 2 YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61
Query: 256 MGKVDLAMTIFEEM 269
G V+ A+ + M
Sbjct: 62 SGSVEDAIRLLHRM 75
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNE 160
++ +I A+ ++ Q E +L + +K + +P+LITYN VL+ + G +LN
Sbjct: 116 NVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNL 175
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
FA M+ G+ PD I+YNTLL+ ++ + F+ M ESG+ D +TY +L+D+F
Sbjct: 176 FAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAG 235
Query: 221 T---GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ G +EE LR +M+ + P I Y SLI+ G V A +F++M
Sbjct: 236 SNQLGRVEELLR---EMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQ 285
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 5/251 (1%)
Query: 10 CKAGNV--SAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
C G + + L +R + I P+ YN +L A + ++ + + K + S
Sbjct: 162 CSKGGLDWEGLLNLFAQMRHEGI-QPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVV 220
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y + F ++ ++ + E+ + I N +I A+A + + A +
Sbjct: 221 ADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGV 280
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F ++ C PD+ TY+ +L I G G + + F+ MKE P +YN+L+ +
Sbjct: 281 FKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGE 340
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ F +M +SG+KPD TY+AL+ GR G E+ ++ M + PS+
Sbjct: 341 GGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEA 400
Query: 246 YRSLIDNLKKM 256
LI + KM
Sbjct: 401 SAGLISSYGKM 411
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG---RVGRVNDMLN 159
+I N ++ A + +E+A ++F + D +TY ++D ++GRV ++L
Sbjct: 188 LITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLR 247
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
E M++ G PD YN+L+ + F++M G PD+ TY+ L+ +G
Sbjct: 248 E---MEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYG 304
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G E+ LF+DMK+ P++ Y SLI + G ++ +F +M
Sbjct: 305 NQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDM 354
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALL-IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++I N ++ A +K + LL +F ++ +PDLITYN +L G V
Sbjct: 151 NLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMV 210
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F +M E+GVV D ++Y +L++ +L REM + G PD+ Y +LI+++
Sbjct: 211 FKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYAD 270
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
GN+ + +F M++ P + Y +L+ G + ++F +M
Sbjct: 271 AGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDM 319
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
I FA +AL +F +++ + CKP Y I++ I+GR G + F M E
Sbjct: 52 IFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPEN 111
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG-NIEE 226
V + ++ L+N + + + L M + ++P+L+TY ++++ + G + E
Sbjct: 112 DVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEG 171
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L LF M+ + I+P + Y +L+ G V+ A +F+ MN S
Sbjct: 172 LLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNES 217
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 99/236 (41%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ A A+ ++ + + K + + Y+ R + Q+ ++
Sbjct: 260 GYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDM 319
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
++++P ++ N +I F + ++++ +F + KPD TY+ +L + GR G
Sbjct: 320 KELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLT 379
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ M P + L+++ K+ L+ + + E+G+ P + Y AL
Sbjct: 380 REAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDAL 439
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I + + G E+ M + + + S+++ K+G D A+ F E+
Sbjct: 440 IQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQ 495
>gi|341606837|gb|AEK83521.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606869|gb|AEK83537.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606977|gb|AEK83591.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606979|gb|AEK83592.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606981|gb|AEK83593.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606983|gb|AEK83594.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606985|gb|AEK83595.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606987|gb|AEK83596.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606989|gb|AEK83597.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606991|gb|AEK83598.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606993|gb|AEK83599.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606995|gb|AEK83600.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606997|gb|AEK83601.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606999|gb|AEK83602.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607001|gb|AEK83603.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607003|gb|AEK83604.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607005|gb|AEK83605.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607007|gb|AEK83606.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607009|gb|AEK83607.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607011|gb|AEK83608.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607013|gb|AEK83609.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607015|gb|AEK83610.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 207
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 135
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 136 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 180
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 38 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 97
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 98 GRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 157
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 158 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 2 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 108
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID K
Sbjct: 2 YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61
Query: 256 MGKVDLAMTIFEEM 269
G V+ A+ + M
Sbjct: 62 SGSVEDAIRLLHRM 75
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ C+ G A + + +N+ P+ Y ++ A D DL + ++
Sbjct: 206 NTMIKGYCQVGKTQKAFEKFRDMELRNV-APDKITYMTLIQACYAEGDFDLCLSLYHEMD 264
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y+ C + E+++Q ++ + +I + AK +
Sbjct: 265 ENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMG 324
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+L+F+ +K +PD++TY +V++ + + GR+++ + + GV + + Y++L+
Sbjct: 325 EAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLI 384
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R+ F EM + G PD Y ALID+ + G +E+L F M+ +
Sbjct: 385 DGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCD 444
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y +I+ L + K + A+ +++ M
Sbjct: 445 QTVYTYTIMINGLFREHKNEEALKMWDMM 473
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 9/266 (3%)
Query: 15 VSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT 72
+ +A R+L+ + + I P+ YN ++ + +F+ +D+ + + Y
Sbjct: 183 IESAERVLEVMENGKIG-PDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYM 241
Query: 73 NFARAFIMTDD---CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
+A D C L ++E P + +V I K + + +F+ +
Sbjct: 242 TLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLV---IGGLCKEGKCVEGYAVFEKM 298
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
CK ++ Y ++D + G + + + F MK+ G+ PD ++Y ++N + K RL
Sbjct: 299 IQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRL 358
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
D + Y +G+ + + Y++LID G+ G + E+ +LF +M ++ P Y Y +L
Sbjct: 359 DEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNAL 418
Query: 250 IDNLKKMGKVDLAMTIFEEMNSSLSD 275
ID L K GK D A+ F+ M D
Sbjct: 419 IDALAKCGKTDEALAFFKRMEDEGCD 444
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N ++ S IE A + + ++ K PD++TYN ++ +VG+ +F
Sbjct: 166 SLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKF 225
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+ V PD I+Y TL+ DLCL + EM E+G++ Y+ +I +
Sbjct: 226 RDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKE 285
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G E +F M Q+ + ++ +Y +LID+ K G + AM +FE M
Sbjct: 286 GKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERM 333
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ N +I +F +E+ L ++ +K +P L TYN +L+ G VN + E
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLN-----GLVNSVFIES 185
Query: 162 AS-----MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
A M+ + PD ++YNT++ ++ + FR+M + PD +TY LI
Sbjct: 186 AERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQ 245
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G+ + L L+++M + + + Y +I L K GK +FE+M
Sbjct: 246 ACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKM 298
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F +G+ ++ N ++ G +G V ++L + MKE GV P +YN LLN L
Sbjct: 119 VFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLV 178
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++ M I PD++TY +I + + G +++ F DM+ + + P
Sbjct: 179 NSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKI 238
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LI G DL ++++ EM+ +
Sbjct: 239 TYMTLIQACYAEGDFDLCLSLYHEMDEN 266
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 112/259 (43%), Gaps = 4/259 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K GN+ A+ L + ++ + + P+ Y V+ ++ +D + + L+ V+ +++
Sbjct: 319 KCGNMGEAMLLFERMKKEGL-EPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNA 377
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y++ + EE+V+ P N +I A AK + ++AL F
Sbjct: 378 MLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKR 437
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
++ C + TY I+++ L R + + L + M + G+ P ++ L L +
Sbjct: 438 MEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGK 497
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ E+ G+ P+ + +++ + G I+E+ +L + + V
Sbjct: 498 VARACKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTV 556
Query: 249 LIDNLKKMGKVDLAMTIFE 267
LI+ L+K G DLA+ +
Sbjct: 557 LINALRKAGNADLALKLMH 575
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 67/133 (50%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
+L Y +D+L G ++++ + F + G + + + N+L+ + + ++ L +
Sbjct: 96 NLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVW 155
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
R M E+G++P L TY L++ + IE + R+ M+ +I P + Y ++I ++
Sbjct: 156 RGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQV 215
Query: 257 GKVDLAMTIFEEM 269
GK A F +M
Sbjct: 216 GKTQKAFEKFRDM 228
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D ++ N L+N++ + FR MG ++ +LI SFG G +EE L ++
Sbjct: 105 DVLAINGDLDNVKSV------FCKFRGMG---FLMNVSAANSLIKSFGSLGMVEELLWVW 155
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
MK+ + PS++ Y L++ L ++ A + E M +
Sbjct: 156 RGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENG 196
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 93/179 (51%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ +++++ +I+ +I K + +A+ +FD + C+PD+ TY +++ L +
Sbjct: 156 LAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCK 215
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G M+EAG P+ ++Y+T++++ RK RR++ L F M GI PD+ T
Sbjct: 216 IGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFT 275
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI +E+ L N+M+ I P I + L+D + K GKV A + + M
Sbjct: 276 YNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 99/179 (55%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ + ++ ++ + +++ ++ ++ +A +FD + CKPD+ +YNI+++ +
Sbjct: 331 LKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCK 390
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
V R+++ F M G+ P+ +SYNTL++ L ++ L F+ M +G P+L T
Sbjct: 391 VKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFT 450
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ L+D F + G ++ RLF M+ +P++ +Y LID + K G + A +F E+
Sbjct: 451 YSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC A LL +R NI +P+ +N ++ + + + +LK +
Sbjct: 277 NSLIQGLCNFSQWKEASALLNEMRSLNI-MPDIVTFNVLVDTICKEGKVSEAQGVLKTMT 335
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y++ + + + + + ++ + N +I + K ++I+
Sbjct: 336 EMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRID 395
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + P+ ++YN ++ L ++G + + N F +M G +P+ +Y+ LL
Sbjct: 396 EAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILL 455
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K FR M + KP+L+ Y LID+ ++GN+ ++ +LF+++ + ++
Sbjct: 456 DGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQ 515
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ +Y ++I+ L K G +D A+ F M
Sbjct: 516 PNAQIYTTIINGLCKEGLLDEALEAFRNM 544
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G +AA LL+ + + PN Y+ ++ + + ++ + I + V
Sbjct: 210 INGLCKIGETAAAAGLLKKMEEAGC-QPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKG 268
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + + + E+ + I+ N ++ K ++ +A
Sbjct: 269 ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQ 328
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + +PD++TY+ ++ V + F +M G PD SYN L+N
Sbjct: 329 GVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGY 388
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K++R+D F EM G+ P+ ++Y LI + G++ E+ LF +M P++
Sbjct: 389 CKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNL 448
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ Y L+D K G A +F M S+ S
Sbjct: 449 FTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP +I ++ +I F+ ++++ A + I L +P ++T+ +++ L +VG+ +
Sbjct: 130 SP-NIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAM 188
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M G PD +Y T++N L KI ++M E+G +P+++TY+ +IDS
Sbjct: 189 ELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH 248
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + E+L +F+ MK + I P I+ Y SLI L + A + EM S
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRS 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 104/239 (43%), Gaps = 2/239 (0%)
Query: 33 PNAYNCVLVAS--AETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN Y ++ + + +DL+F +L ++ + +T Q +
Sbjct: 131 PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMEL 190
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++V + II K + A + ++ C+P+++TY+ ++D +
Sbjct: 191 FDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK 250
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
RVN+ L+ F+ MK G+ PD +YN+L+ L + EM I PD++T
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVT 310
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L+D+ + G + E+ + M + + P + Y SL+ +V A +F+ M
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA-SMKEAGVVPDFIS 175
R I+ AL F+H+ K P +I + +L + ++G+ D + M+ AG+ P+ +
Sbjct: 76 RNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYT 135
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ L+N ++R+DL ++ + G++P ++T+T LI+ + G +++ LF+DM
Sbjct: 136 LSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMV 195
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ RP +Y Y ++I+ L K+G+ A + ++M +
Sbjct: 196 ARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEA 232
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+YN ++ + ID + Q+ +++ T ++ Y + + +
Sbjct: 380 SYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNM 439
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ ++ + ++ F K KA +F ++ KP+L+ YNI++D + + G +
Sbjct: 440 HTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNL 499
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D F+ + G+ P+ Y T++N L K LD L FR M E G PD ++Y +
Sbjct: 500 RDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVI 559
Query: 215 IDSFGRTGNIEESLRLFNDMKQQ 237
I F + +++L +M+ +
Sbjct: 560 IRGFLHHKDESRAVQLIGEMRDK 582
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 125/282 (44%), Gaps = 29/282 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ +CK G VS A +L+++ + + P+ Y+ ++ + +++ + ++ ++
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGV-EPDVVTYSSLMYGYSLRSEVVEARKLFDAMI 370
Query: 61 -------VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
V S + + Y R D+ QL F E + Q +P ++ N +I
Sbjct: 371 TKGCKPDVFSYNILINGYCKVKR----IDEAKQL--FNEMIHQGLTPNNV-SYNTLIHGL 423
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ + +A +F ++ P+L TY+I+LD + G F +M+ P+
Sbjct: 424 CQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNL 483
Query: 174 ISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ YN L++ NLR R+L F E+ G++P+ YT +I+ + G ++E+
Sbjct: 484 VMYNILIDAMCKSGNLRDARKL------FSELFVKGLQPNAQIYTTIINGLCKEGLLDEA 537
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L F +M++ P Y +I A+ + EM
Sbjct: 538 LEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEM 579
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 94/170 (55%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I ++ K+ ++++A + D + C+P+ I Y+ ++D +VG++++ F
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E G P+ +Y++L++ L K +RLDL L M E+ P+++ YT +ID +
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G +E+ RL + M+++ P++ Y ++ID K GKVD + + +M +
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC AG A +++ + K F+P+ Y+ V+ + +D +F + +++ +
Sbjct: 455 LCGAGKFEKAYSIIREMMSKG-FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
YT +F Q + +E+V+ +++ +I A+ K+R++ A +F
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD-------------- 172
+ + C P+++TY ++D + G++ +A M+ +PD
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD 633
Query: 173 --FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+Y L++ L K ++ M G +P+ + Y ALID F + G ++E+ +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M ++ P++Y Y SLID L K ++DLA+ + M
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 129/291 (44%), Gaps = 23/291 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND-------IDLSFQI 55
N I C++G+ S A +LL+ + D +L+ N+ ++L+ +
Sbjct: 373 NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKA 432
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
++L + L+ +N AR + I E++ +++I
Sbjct: 433 YGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCN 492
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ +++ A L+F+ +K PD+ TY I++D +VG + F M G P+ ++
Sbjct: 493 ASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVT 552
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y L++ K R++ F M G P+++TYTALID ++G IE++ +++ M+
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Query: 236 QQ---------------QIR-PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
IR P+I+ Y +L+D L K KV A + + M+
Sbjct: 613 GNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 136/327 (41%), Gaps = 50/327 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR---------------DKNIFLPN--AYNCVLVASAETND 48
I+ CK+G + A ++ +R D NI PN Y ++ + +
Sbjct: 592 IDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHK 651
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+ + +L + V + Y F + + ++ + ++ +
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++++ AL + + C P++I Y ++D L +VG+ ++ + M+E G
Sbjct: 712 LIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ ++Y +++ K ++D CL R+MG G P+ +TY LI+ G ++++
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAH 831
Query: 229 RLFNDMKQQQIR---------------------------------PSIYVYRSLIDNLKK 255
+L ++MKQ P I YR LID+ K
Sbjct: 832 QLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891
Query: 256 MGKVDLAMTIFEEMNSSLSDLAGPKDF 282
G+++LA+ + +EM+S S A KD
Sbjct: 892 AGRLELALELHKEMSSCTSYSAADKDL 918
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I+ CK G + A + + ++ + PN Y + D +DL+ ++L +L +S
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERG-YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736
Query: 64 RTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT TD+ +L+ +EE + P +++ +I F K+ +++
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE--KGCHP-NVVTYTAMIDGFGKAGKVD 793
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K L + + C P+ +TY ++++ G ++D MK+ Y ++
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVI 853
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
R + L E+ E+ P + Y LIDSF + G +E +L L +M
Sbjct: 854 EGFN--REFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSY 911
Query: 241 PSIY--VYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +Y SLI++L KVD A ++ +M
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADM 942
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 55/314 (17%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LCKAG A+ L++ +++ Y ++ E + + + L SR
Sbjct: 273 FVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGLCEASLFEEAMDFL------SR 324
Query: 65 TLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESII----VVNRIIFAFAKSRQ 118
SS C N I+ C + L + ++ + E + N +I A+ +S
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIV------------LDIL-------GRVGRVNDMLN 159
A + + C+P + YNI+ LD+L G + + +LN
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 160 E----------------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+ M G +PD +Y+ ++ L ++D + F
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM + + PD+ TYT LIDSF + G ++++ + F++M + P++ Y +LI K
Sbjct: 505 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 564
Query: 258 KVDLAMTIFEEMNS 271
K+ A +FE M S
Sbjct: 565 KMSSANELFEMMLS 578
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 23/246 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL---- 59
I+ LCK G A RL+ + +K PN Y ++ + +D ++++ +
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCH-PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
V+ R L + C A + DD QLL +E+ Q P+ + ++I F
Sbjct: 807 CAPNFVTYRVLINHCC-----AAGLLDDAHQLL---DEMKQTYWPKHMAGYRKVIEGF-- 856
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV--VPDF 173
+R+ +L + D I P + Y I++D + GR+ L M D
Sbjct: 857 NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADK 916
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
Y++L+ +L ++D + +M + G P+L + L+ R EE+L+L +
Sbjct: 917 DLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDC 976
Query: 234 MKQQQI 239
+ Q +
Sbjct: 977 ICQMMV 982
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+++ R G N L E +K+ G P ++YN L+ + RLD + REM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
SG D T + + G E+L L +++++ + +Y +I L + +
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 262 AMTIFEEMNSS 272
AM M SS
Sbjct: 318 AMDFLSRMRSS 328
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 126/316 (39%), Gaps = 53/316 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I K C+ G + A+ L L+D + P+ YN ++ E + +D ++ + +++
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLG-YKPSRLTYNALVRVFLEADRLDTAYLVHREM- 258
Query: 61 VSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIE-EVVQIASPESIIVVNRIIFAFAKSR 117
S + D YT F + L IE E ++ + ++ ++I ++
Sbjct: 259 -SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDT----VIYTQMISGLCEAS 313
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVL------DILGRVGRV----------------N 155
E+A+ ++ C P+++TY I+L LGR R+ N
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN 373
Query: 156 DMLNEFA-------------SMKEAGVVPDFISYNTLLNN------LRKIRRLDLCLIYF 196
+++ + M + G P ++ YN L+ L + L+L +
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM ++ + + + + L G E++ + +M + P Y +I L
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493
Query: 257 GKVDLAMTIFEEMNSS 272
KVD A +FEEM S+
Sbjct: 494 SKVDNAFLLFEEMKSN 509
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 98/174 (56%), Gaps = 1/174 (0%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q+ +P ++ N +I K ++ +A +F +K + C PD++T+N ++D G+ G ++
Sbjct: 182 QLPAP-NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ M+ +G D ++YN L+N K R++ YF M G+ +++T++ +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D+F + G + E+++LF M+ + + + + Y LID K G++D A+ + +EM
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 89/170 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I + K ++++ + + ++ CK D++TYN +++ + GR+ FA
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+MK GV+ + ++++T ++ K + + F +M G+ + TYT LID + G
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+++++ L ++M +Q + ++ Y L+D L K KV A + M +
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G ++ A L +++ LP+ +N ++ + ++D Q+++++
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGC-LPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y F + + + +++ + + AF K +
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F ++ + TY ++D + GR++D + M GV + ++Y L+
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R++ R M ++G++ + L YT LI N E++L L ++MK + +
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I +Y +LI L + K+D A ++ +M+ S
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 124/292 (42%), Gaps = 31/292 (10%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+++ CK G V A++L +R + + L Y C++ + + +D + +L +++
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKSRQI 119
L+ YT + E+V+++ + ++ +I ++
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAE----AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKAL + +K + D+ Y ++ L V ++++ + M E+G+ P++I Y T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKP----------------------DLLTYTALIDS 217
++ K ++ + +++ +SG +P D + YTAL+D
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 534
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + GN+ ++ L M ++ ++ Y I + + A +F EM
Sbjct: 535 YLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 586
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+ +L +L G ++D + A ++E V P+ + N +L L + R L R + E
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRL----VRRLFE 181
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
P++ T+ +ID + G + E+ LF+ MK+ P + + SLID K G++D
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 262 AMTIFEEMNSS 272
+ EEM S
Sbjct: 242 VEQLVEEMRRS 252
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKA + A +++S+ DK + P+ Y+ ++ A + + +D + ++L +
Sbjct: 262 NALVNGLCKADKMERAHAMIESMVDKGV-TPDVITYSVLVDAFCKASRVDEALELLHGMA 320
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + + + +D + +V + N +I K+ E
Sbjct: 321 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFE 380
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + +PD++T+ ++D L + G+V + M GV P+ ++YN L+
Sbjct: 381 QASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLV 440
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K R++ + EM SG P+ +TY +L+ + R +++L+L + +K
Sbjct: 441 HGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWD 500
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y L+D L K GK + A+T+ EEM
Sbjct: 501 PDTVTYNILVDGLWKSGKTEQAITVLEEM 529
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 125/273 (45%), Gaps = 5/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNA--YNCVLVASAETNDIDLSFQILKDL 59
N +++ LCK + A L++SLRD ++ + P+ ++ ++ + D + D+
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDM 249
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y D + IE +V +I + ++ AF K+ ++
Sbjct: 250 IAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 309
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++AL + + C P+++T+N ++D L + R + + +VPD +++N L
Sbjct: 310 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNIL 369
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ K + F EM ++PD++T+ ALID + G +E + + + M +
Sbjct: 370 IAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 429
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y L+ L K G+++ EEM SS
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSS 462
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 141 YNIVLDILGRVGRVNDMLNEF-ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
YNIVL L R G L F M GV P ++YNT++N L K L + F E+
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ G PD++TY LIDS + G++EE+ RL M + P++ Y LI+ L K+G++
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 260 DLAMTIFEEMNSSLSDL 276
D A + +EM D+
Sbjct: 168 DEARELIQEMTRKSCDV 184
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CKA V A+ LL + + PN +N ++ +++ +FQI L V +
Sbjct: 300 VDAFCKASRVDEALELLHGMASRGC-TPNVVTFNSIIDGLCKSDRSGEAFQIA--LQVYN 356
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R L D + + Q EE+V ++ +I K+ Q+E
Sbjct: 357 RMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEA 416
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A I D + L P+++TYN+++ L + GR+ + M +G VP+ ++Y +L+
Sbjct: 417 ARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVY 476
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R D L ++ G PD +TY L+D ++G E+++ + +M + +P
Sbjct: 477 ALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQP 536
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIF 266
+ + + L + G + M +
Sbjct: 537 DSFTFAACFGGLHRSGNLAGTMELL 561
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 40/257 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCKAG++ A RL + + +PN Y+ ++ + ID + ++++++
Sbjct: 120 NTLIDSLCKAGDLEEARRLHGGMSSRGC-VPNVVTYSVLINGLCKVGRIDEARELIQEMT 178
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S C L +II N + K
Sbjct: 179 RKS--------------------CDVL-------------PNIITYNSFLDGLCKQSMTA 205
Query: 121 KALLIFDHIK--GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+A + ++ L+ PD +T++ ++D L + G+ ++ N+ M G VP+ ++YN
Sbjct: 206 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACND--DMIAGGYVPNVVTYNA 263
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K +++ M + G+ PD++TY+ L+D+F + ++E+L L + M +
Sbjct: 264 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 323
Query: 239 IRPSIYVYRSLIDNLKK 255
P++ + S+ID L K
Sbjct: 324 CTPNVVTFNSIIDGLCK 340
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
L IF E+ + +I+ N II KS ++ + +F+ + PD++TYN ++D
Sbjct: 65 LEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLID 124
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG--I 204
L + G + + M G VP+ ++Y+ L+N L K+ R+D +EM +
Sbjct: 125 SLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV 184
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR--PSIYVYRSLIDNLKKMGKVDLA 262
P+++TY + +D + E+ L ++ +R P + +LID L K G+ D A
Sbjct: 185 LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA 244
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
+ P +++ N ++ KS +IE+ + + C P+ +TY ++ L R R +D
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
L + +K G PD ++YN L++ L K + + + EM G +PD T+ A
Sbjct: 487 ALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFG 546
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
R+GN+ ++ L + + + P S++D
Sbjct: 547 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
>gi|341606831|gb|AEK83518.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606833|gb|AEK83519.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606835|gb|AEK83520.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606839|gb|AEK83522.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606841|gb|AEK83523.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606843|gb|AEK83524.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606845|gb|AEK83525.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606847|gb|AEK83526.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606849|gb|AEK83527.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606851|gb|AEK83528.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606853|gb|AEK83529.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606855|gb|AEK83530.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606857|gb|AEK83531.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606859|gb|AEK83532.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606861|gb|AEK83533.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606863|gb|AEK83534.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606865|gb|AEK83535.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606867|gb|AEK83536.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606871|gb|AEK83538.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606873|gb|AEK83539.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606875|gb|AEK83540.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606877|gb|AEK83541.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606879|gb|AEK83542.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606881|gb|AEK83543.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606883|gb|AEK83544.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606885|gb|AEK83545.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606887|gb|AEK83546.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606889|gb|AEK83547.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606891|gb|AEK83548.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606893|gb|AEK83549.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606895|gb|AEK83550.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606897|gb|AEK83551.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606899|gb|AEK83552.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606901|gb|AEK83553.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606903|gb|AEK83554.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606905|gb|AEK83555.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606907|gb|AEK83556.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606909|gb|AEK83557.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606911|gb|AEK83558.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606913|gb|AEK83559.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606915|gb|AEK83560.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606917|gb|AEK83561.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606919|gb|AEK83562.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606921|gb|AEK83563.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606923|gb|AEK83564.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606925|gb|AEK83565.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606927|gb|AEK83566.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606929|gb|AEK83567.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606931|gb|AEK83568.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606933|gb|AEK83569.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606935|gb|AEK83570.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606937|gb|AEK83571.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606939|gb|AEK83572.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606941|gb|AEK83573.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606943|gb|AEK83574.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606945|gb|AEK83575.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606947|gb|AEK83576.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606949|gb|AEK83577.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606951|gb|AEK83578.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606953|gb|AEK83579.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606957|gb|AEK83581.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606959|gb|AEK83582.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606961|gb|AEK83583.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606963|gb|AEK83584.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606965|gb|AEK83585.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606967|gb|AEK83586.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606969|gb|AEK83587.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606971|gb|AEK83588.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606973|gb|AEK83589.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606975|gb|AEK83590.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRI 135
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 136 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 180
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 38 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 97
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 98 GRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 157
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 158 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 2 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 108
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID K
Sbjct: 2 YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61
Query: 256 MGKVDLAMTIFEEM 269
G V+ A+ + M
Sbjct: 62 SGSVEDAIRLLHRM 75
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 140/271 (51%), Gaps = 11/271 (4%)
Query: 6 IEKLCKAGNVSAAV----RLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
++ LCK G V A+ +++Q + +I Y+ ++ +++ S +L ++L
Sbjct: 321 VDALCKEGVVLEALSVFGKMIQIAMEPDIV---TYSSLIHGVCKSSLWKESSTLLNEML- 376
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
SR + D ++ + F ++ I +++ +++ N ++ + Q+
Sbjct: 377 -SRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQM 435
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +FD + C PD+++YNI++ + R+++ F M G+ P+ I++ TL
Sbjct: 436 DEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTL 495
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L + R F++MG G PDL+TY+ L+ F + G+++E+L LF +K+ Q+
Sbjct: 496 ISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQL 555
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+P+ + + L+ + K GK++ A +F ++
Sbjct: 556 KPNHVICKILLGGMCKAGKLEDAKELFSSLS 586
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 88/163 (53%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ K + A++ + L C+P++++Y+I++D L + VN+ ++ F M+ G
Sbjct: 215 IVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG 274
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P ++YN+L+ + + I F+EM E +KPD++T++ L+D+ + G + E+L
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEAL 334
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+F M Q + P I Y SLI + K + T+ EM S
Sbjct: 335 SVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS 377
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK V+ AV L +R I P YN ++ + + + K++L +
Sbjct: 251 IDSLCKNRLVNEAVDLFYHMRSIGIS-PTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ A + L +++QIA I+ + +I KS +++
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESS 369
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + +PD++T++I +D+ + G V++ + M E G+ P+ ++YN+L++
Sbjct: 370 TLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGY 429
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++D F M G PD+L+Y LI + ++ I+E+ +LF++M + + P+
Sbjct: 430 CLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNS 489
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +LI L + G+ A +F++M S
Sbjct: 490 ITHTTLISGLCQAGRPYAAKELFKKMGS 517
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
F K + +A I + + +P+++TYN ++D ++++ F M G PD
Sbjct: 394 FCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+SYN L+ K R+D F EM G+ P+ +T+T LI + G + LF
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFK 513
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M P + Y +L+ K G +D A+ +FE + S
Sbjct: 514 KMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKS 553
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 97/182 (53%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
+++++++V++ ++ + II + K+R + +A+ +F H++ + P ++TYN ++
Sbjct: 229 IVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYG 288
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ G+ F M E + PD ++++ L++ L K + L F +M + ++PD
Sbjct: 289 MCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPD 348
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++TY++LI ++ +ES L N+M + IRP + + +D K G V A +I
Sbjct: 349 IVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIIN 408
Query: 268 EM 269
M
Sbjct: 409 LM 410
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 93/177 (52%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ SII N +I +I +A+ D+I +P + T+ ++++ L ++G
Sbjct: 164 KIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIG 223
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ + + M E P+ +SY+ ++++L K R ++ + F M GI P ++TY
Sbjct: 224 KTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYN 283
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LI +G +++ LF +M + ++P + + L+D L K G V A+++F +M
Sbjct: 284 SLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKM 340
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I + KS +I++A +FD + P+ IT+ ++ L + GR F
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFK 513
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G PD I+Y+TLL+ K LD L F + +S +KP+ + L+ + G
Sbjct: 514 KMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAG 573
Query: 223 NIEESLRLFNDMKQQQIRPSI 243
+E++ LF+ + ++++P +
Sbjct: 574 KLEDAKELFSSLSIEELQPDV 594
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 73/150 (48%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ AL F+ + + P + +N +L L R+ + +++ + M+ GV + L
Sbjct: 86 DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N L + + L ++ + G KP ++T+ LI+ G I E++ + + +
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P++Y + +++ L K+GK A+ ++M
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKM 235
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 80/184 (43%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + ++V + I N+++ A + + + + I+ ++ + T I+++
Sbjct: 89 LAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINC 148
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + V + + + G P I++NTL+N L R+ + + G +P
Sbjct: 149 LCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPT 208
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ T+T +++ + G ++ M + P + Y +ID+L K V+ A+ +F
Sbjct: 209 VYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFY 268
Query: 268 EMNS 271
M S
Sbjct: 269 HMRS 272
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/138 (18%), Positives = 61/138 (44%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+YN ++ ++ ID + Q+ ++ T +S +T +++
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
P +I + ++ F K +++AL +F+ +K + KP+ + I+L + + G++
Sbjct: 516 GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575
Query: 155 NDMLNEFASMKEAGVVPD 172
D F+S+ + PD
Sbjct: 576 EDAKELFSSLSIEELQPD 593
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I G + A L+ ++ K F P YN V+ + + + ++ ++L
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + S Y + D + ++ ++ + ++ F +S ++
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL+ F+ +K PD + Y I++ R G ++ +N M + G D ++YNT+L
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + L F EM E + PD T T LID + GN++ ++ LF MK+++IR
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y +L+D K+G +D A I+ +M S
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 9/242 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK GN+ A+ L Q +++K I L YN +L + DID + +I D++
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y+ A + +E++ ++++ N +I + +S
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-----EAGVVPDFISYNTL 179
+ + PD I+YN + I G V R +M F +K + G+VPD +YN++
Sbjct: 607 FLEKMISEGFVPDCISYNTL--IYGFV-REENMSKAFGLVKKMEEEQGGLVPDVFTYNSI 663
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ + ++ + R+M E G+ PD TYT +I+ F N+ E+ R+ ++M Q+
Sbjct: 664 LHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Query: 240 RP 241
P
Sbjct: 724 SP 725
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 128/273 (46%), Gaps = 11/273 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCK G A + + LR Y +L+ + + D+ + ++ D+
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM-- 366
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
SR + D C+++ F + + + L++ V + ++ +I + + I
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISY 176
A+ + + + C D++TYN +L L + +G + + NE M E + PD +
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE---MTERALFPDSYTL 483
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L++ K+ L + F++M E I+ D++TY L+D FG+ G+I+ + ++ DM
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++I P+ Y L++ L G + A +++EM
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 122/262 (46%), Gaps = 3/262 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
CK G+V ++ +R +++ +P+ ++ ++ + ++D + + +
Sbjct: 351 CKKGDVVETEKVFSDMRSRDV-VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ YT + + + + E++Q ++ N I+ K + + +A +F+
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ PD T I++D ++G + + + F MKE + D ++YNTLL+ K+
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+D + +M I P ++Y+ L+++ G++ E+ R++++M + I+P++ +
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
S+I + G + E+M
Sbjct: 590 SMIKGYCRSGNASDGESFLEKM 611
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 88/181 (48%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+ + ++ +N ++ A K ++EK ++ PD++TYN ++
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G + + +M G P +YNT++N L K + + F EM SG+ PD TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+L+ + G++ E+ ++F+DM+ + + P + + S++ + G +D A+ F +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 272 S 272
+
Sbjct: 404 A 404
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ A+ +F +K + + D++TYN +LD G+VG ++ +A M
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
++P ISY+ L+N L L + EM IKP ++ ++I + R+GN +
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
M + P Y +LI + + A + ++M L
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
>gi|399107204|gb|AFP20366.1| At1g03560-like protein, partial [Capsella grandiflora]
gi|399107210|gb|AFP20369.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ G V A+ + ++ K I +P +YN ++ + + + ++ K + +
Sbjct: 377 IDALCQVGRVFEALEMFDEMKQKGI-VPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 435
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + F + + + + + E + ++ N ++F AKS ++ A
Sbjct: 436 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 495
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K + PD ITY +++ + + ++ + F M E VPD ++ N+L++ L
Sbjct: 496 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 555
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R D F ++ E ++P TY L+ GR G ++E + L +M P++
Sbjct: 556 YKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 615
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +++D L K G V+ A+ + M +
Sbjct: 616 ITYNTILDCLCKNGAVNDALDMLYSMTT 643
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 6/275 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC AG +S A + ++ K+ P+ Y +L + D +I +
Sbjct: 307 IQVLCDAGRISDAKDVFWKMK-KSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 365
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT A + L +E+ Q N +I F K+ + AL
Sbjct: 366 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 425
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F H+ KP+ T+ + ++ G+ G + + MK G+VPD ++ N +L L
Sbjct: 426 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 485
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL + F E+ G+ PD +TYT +I + +E++++F DM + P +
Sbjct: 486 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 545
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF---EEMNSSLSD 275
SLID L K G+ D A IF +EMN +D
Sbjct: 546 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 580
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ + ++ AF K R +E L + ++ KP++ +Y I + +LG+ R ++
Sbjct: 229 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 288
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A M+ G PD I++ L+ L R+ F +M +S KPD +TY L+D FG
Sbjct: 289 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 348
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ + + ++N MK ++ Y ++ID L ++G+V A+ +F+EM
Sbjct: 349 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 396
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I I+ A +F +K L C PD TYN++LD +G+ R+ +ML M
Sbjct: 794 NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 853
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G +++YNT+++ L K RRL+ + + + G P TY L+D + G IE+
Sbjct: 854 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 913
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LFN+M + + + +Y L++ + G + +F++M
Sbjct: 914 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 956
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 127/305 (41%), Gaps = 36/305 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR-DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
NG + L K+G A+ + + + D + Y+ ++VA + D++ +L+++
Sbjct: 199 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 258
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT R + + ++ +I +I + +I
Sbjct: 259 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 318
Query: 122 ALLIFDHIKGLKCKPDLITY-----------------------------------NIVLD 146
A +F +K KPD +TY V+D
Sbjct: 319 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 378
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L +VGRV + L F MK+ G+VP+ SYN+L++ K R L F+ M G KP
Sbjct: 379 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 438
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+ T+ I+ +G++G ++++ + MK + I P + +++ L K G++ +A +F
Sbjct: 439 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 498
Query: 267 EEMNS 271
E+ +
Sbjct: 499 HELKA 503
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 27/282 (9%)
Query: 3 NGYIEKL-----CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLS--- 52
NGY L K+G A++ + ++ K I +P+ A N VL A++ + ++
Sbjct: 439 NGYTHVLFINYYGKSGESIKAIQRYELMKSKGI-VPDVVAGNAVLFGLAKSGRLGMAKRV 497
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV------VQIASPESIIVV 106
F LK + VS T++ YT +M C++ F E V ++ ++ V
Sbjct: 498 FHELKAMGVSPDTIT---YT------MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 548
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I K+ + ++A IF +K + +P TYN +L LGR G+V ++++ M
Sbjct: 549 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 608
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P+ I+YNT+L+ L K ++ L M G PDL +Y +I + E
Sbjct: 609 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 668
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ +F MK+ I P +++ + K+G + A+ I ++
Sbjct: 669 AFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKD 709
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN ++ L + G + L + M GVVP +Y+ L+ K R ++ L REM
Sbjct: 197 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 256
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G+KP++ +YT I G+ +E+ R+ M+ + +P + + LI L G++
Sbjct: 257 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRI 316
Query: 260 DLAMTIFEEMNSS 272
A +F +M S
Sbjct: 317 SDAKDVFWKMKKS 329
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+FD ++ K ++ T+ + LG G + MKEAG+V + +YN L+ L
Sbjct: 147 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 206
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K L +R M G+ P + TY+ L+ +FG+ ++E L L +M+ ++P++Y
Sbjct: 207 KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 266
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y I L + + D A I +M +
Sbjct: 267 SYTICIRVLGQAKRFDEAYRILAKMEN 293
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 122/283 (43%), Gaps = 27/283 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQI---LK 57
N ++ LCK G V+ A+ +L S+ K +P+ +YN V+ + + +F I +K
Sbjct: 619 NTILDCLCKNGAVNDALDMLYSMTTKGC-IPDLSSYNTVIYGLVKEERYNEAFSIFCQMK 677
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+L+ +F + +M + L I + +Q S + ++ K
Sbjct: 678 KVLIPDYATLCTILPSFVKIGLMKE---ALHIIKDYFLQPGSKTDRSSCHSLMEGILKKA 734
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS-- 175
IEK++ + I + I LD + + + +++ +V F S
Sbjct: 735 GIEKSIEFAEIIA---------SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 785
Query: 176 -------YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
YN+L+ L +D+ F EM E G PD TY L+D+ G++ IEE L
Sbjct: 786 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 845
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ +M ++ + Y ++I L K +++ A+ ++ + S
Sbjct: 846 KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 888
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N +L+++ GRV DM F M+ V + ++ + L L + M E
Sbjct: 129 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 188
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
+GI + TY L+ ++G E+L ++ M + PS+ Y L+ K V+
Sbjct: 189 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVET 248
Query: 262 AMTIFEEMNS 271
+ + EM +
Sbjct: 249 VLWLLREMEA 258
>gi|341605711|gb|AEK82958.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605785|gb|AEK82995.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605787|gb|AEK82996.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605789|gb|AEK82997.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605793|gb|AEK82999.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605795|gb|AEK83000.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 3/264 (1%)
Query: 9 LCKAGNVSAAVRLLQSL-RDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
LC+ G V A L + L R + I + +N ++ + D+ + +++ +
Sbjct: 160 LCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVA 219
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
L Y + F + D L +E + +++ +I + K + +++A +
Sbjct: 220 LDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSL 279
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ + PD++T + ++D L R G+ ++ F M + GV P+ ++Y TL+++L K
Sbjct: 280 YEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAK 339
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
RR L EM G+ DL+ YTAL+D G+ G IEE+ + + I P+
Sbjct: 340 ARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVT 399
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D + G +D A + +M
Sbjct: 400 YTVLVDAHCRAGNIDGAEQVLLQM 423
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 100/186 (53%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ L + E+V +++ ++ K +IE+A + H + P+ +TY ++
Sbjct: 344 SESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVL 403
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+D R G ++ M+E V+P+ +++++++N L K L Y R+M +SGI
Sbjct: 404 VDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGI 463
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
P+++TY LID F + E +L ++ DM + + + +V SL++ L+K G ++ A
Sbjct: 464 APNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEA 523
Query: 265 IFEEMN 270
+F++M+
Sbjct: 524 LFKDMD 529
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 124/271 (45%), Gaps = 1/271 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ CK +++AA+ +++ + + + L YN ++ + D D + ++++ +
Sbjct: 191 NALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKA 250
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT + + E +V+ ++ ++ ++ + Q +
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F + + P+ +TY ++D L + R ++ L M GVV D + Y L++
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD 370
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K +++ R I P+ +TYT L+D+ R GNI+ + ++ M+++ + P
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ + S+I+ L K G + A +M S
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDS 461
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G S A++LL+ ++ +N PN Y ++V E + + +L ++
Sbjct: 611 NTMIAARCREGKTSKALKLLKEMK-RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMA 669
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +S + +A + +L E ++ I V N ++
Sbjct: 670 SAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMAR 729
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILG--RVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A ++ D + PD IT+N + ILG + +++ +A M G+ P+ ++NT
Sbjct: 730 NATVVLDEMLTRGIAPDTITFNAL--ILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNT 787
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL L R+ +M + G++P+ LTY L+ + + N E+LRL+ +M +
Sbjct: 788 LLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKG 847
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SL+ + K G ++ A +F EM
Sbjct: 848 FIPKASTYNSLMSDFAKAGMMNQAKELFSEM 878
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+AGN+ A ++L + +K++ +PN ++ ++ + + + ++ + S
Sbjct: 404 VDAHCRAGNIDGAEQVLLQMEEKSV-IPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSG 462
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F L +++ + VV+ ++ K+ IE A
Sbjct: 463 IAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAE 522
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + D + Y ++D L + G + + E + PD + YN +N L
Sbjct: 523 ALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCL 582
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ + + +EM +G++PD TY +I + R G ++L+L +MK+ I+P++
Sbjct: 583 CTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNL 642
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +L+ L + G V A + EM S+
Sbjct: 643 ITYTTLVVGLLEAGVVKKAKFLLNEMASA 671
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N +I LC G S A L+ +R+ + A YN ++ A + ++LK++
Sbjct: 576 NVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKR 635
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+S + YT + + + E+ + + R++ A + SR+ +
Sbjct: 636 NSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDV 695
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L I + + G D+ YN ++ +L G + M G+ PD I++N L+
Sbjct: 696 ILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALIL 755
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K LD + +M G+ P++ T+ L+ G I E+ + +DMK+ + P
Sbjct: 756 GHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEP 815
Query: 242 SIYVYRSLIDNL-KKMGKVDLAMTIFEEMNS 271
+ Y L+ KK KV+ A+ ++ EM S
Sbjct: 816 NNLTYDILVTGYAKKSNKVE-ALRLYCEMVS 845
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 129/303 (42%), Gaps = 42/303 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ L K GN+ A L + + ++ + L + Y ++ +T ++ +F++ ++L+ +
Sbjct: 509 VNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNL 568
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + Y F ++ F++E+ N +I A + + KAL
Sbjct: 569 SPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALK 628
Query: 125 IFDHIKGLKCKPDLITY-NIVLDIL--GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ +K KP+LITY +V+ +L G V + +LNE AS AG P +++ +L
Sbjct: 629 LLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMAS---AGFAPTSLTHQRVLQ 685
Query: 182 NLRKIRRLDLCL-----------------------------------IYFREMGESGIKP 206
RR D+ L + EM GI P
Sbjct: 686 ACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAP 745
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D +T+ ALI ++ +++ + ++ M Q + P+I + +L+ L+ G++ A T+
Sbjct: 746 DTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVL 805
Query: 267 EEM 269
+M
Sbjct: 806 SDM 808
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 3/250 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
L +AG V A LL + F P + + VL A + + D+ +I + ++ +
Sbjct: 652 LLEAGVVKKAKFLLNEMASAG-FAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHA 710
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
Y + ++E++ I N +I KS ++ A I+
Sbjct: 711 DITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIY 770
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ P++ T+N +L L GR+ + + MK+ G+ P+ ++Y+ L+ K
Sbjct: 771 AQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKK 830
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
L + EM G P TY +L+ F + G + ++ LF++MK++ + + Y
Sbjct: 831 SNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTY 890
Query: 247 RSLIDNLKKM 256
L++ K+
Sbjct: 891 DILLNGWSKL 900
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
++ LC+ G S A L + + DK PN C L+ S A+ S +L +++
Sbjct: 299 VDGLCRDGQFSEAYALFREM-DKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG 357
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKSRQI 119
+ YT + ++V++ A ++I + ++ A ++ I
Sbjct: 358 VVMDLVMYTALMDRLGKEGKIEE----AKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNI 413
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A + ++ P+++T++ +++ L + G + + MK++G+ P+ ++Y TL
Sbjct: 414 DGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTL 473
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K + + L +R+M G++ + +L++ + GNIE + LF DM ++ +
Sbjct: 474 IDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGL 533
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +L+D L K G + A + +E+
Sbjct: 534 LLDHVNYTTLMDGLFKTGNMPAAFKVGQEL 563
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D++ +N ++D +V + L M GV D + YN+L+ D L
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M G++P+++TYTALI + + ++E+ L+ M + + P + +L+D L +
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRD 305
Query: 257 GKVDLAMTIFEEMN 270
G+ A +F EM+
Sbjct: 306 GQFSEAYALFREMD 319
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 98/234 (41%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LC G A +L + + I P+ +N +++ +++ +D +F I +L
Sbjct: 716 NTLVHVLCCHGMARNATVVLDEMLTRGI-APDTITFNALILGHCKSSHLDNAFAIYAQML 774
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + + + ++ ++ + + + ++ +AK
Sbjct: 775 HQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKV 834
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL ++ + P TYN ++ + G +N F+ MK GV+ +Y+ LL
Sbjct: 835 EALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILL 894
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
N K+R I ++M E G KP T +++ +F R G E+ RL +
Sbjct: 895 NGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
I+ + + Q SP +I N ++ + +I +A + +K + +P+ +TY+I++
Sbjct: 769 IYAQMLHQGLSP-NIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGY 827
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ + L + M G +P +YN+L+++ K ++ F EM G+
Sbjct: 828 AKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTS 887
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
TY L++ + + N E L DMK+ +PS
Sbjct: 888 STYDILLNGWSKLRNGIEVRILLKDMKELGFKPS 921
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 10/180 (5%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIF----DHIKGLKCKPDLITYNIVLDILGRVGRVN 155
P + +N II ++ R + AL + + D ++YNI L L G
Sbjct: 73 PGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGR 132
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD----LCLIYFREMGESGIKPDLLTY 211
+ M + GV D ++ +T L L + + L + R G G+ D++ +
Sbjct: 133 LAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGL--DVVGW 190
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
ALID + + ++ +L + M Q + + Y SL+ G D A+ + E M +
Sbjct: 191 NALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKA 250
>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 6/273 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLV 61
N + LC+AG ++A L S+R + LV+S A + D+S ++L +
Sbjct: 112 NMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEAQC 171
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S + Y NF I + + E+++ S N +I + +++
Sbjct: 172 SGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDE 231
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNT 178
A + + C PD++TYNI+L L R V R D+L E E P+ +SY T
Sbjct: 232 AFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCE--FAPNVVSYTT 289
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ ++ ++D F EM SG KP++ T++AL+D F + G++ +L + +
Sbjct: 290 VISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHG 349
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P++ SLI+ + G V+ + ++ EMN+
Sbjct: 350 CAPNVITLTSLINGYCRAGWVNHGLDLWREMNA 382
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 6/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N ++ L K + A+ L + L R + +N ++ D+D +F++L D+
Sbjct: 182 NNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDM-- 239
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEV-VQIASPESIIVVNRIIFAFAKSRQ 118
S S D Y D + +EEV ++ +++ +I + + +
Sbjct: 240 GSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSK 299
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F + KP++ T++ ++D + G + L + G P+ I+ +
Sbjct: 300 MDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTS 359
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N + ++ L +REM I +L TY+ LI + ++ ++E+ L +KQ
Sbjct: 360 LINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSD 419
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P +VY +ID K G +D A I EM
Sbjct: 420 IVPLAFVYNPVIDGYCKSGNIDEANAIVAEM 450
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC AG+V A LL + P+ YN +L + +D + +L+++ +
Sbjct: 220 IRGLCTAGDVDEAFELLGDMGSFGC-SPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKC 278
Query: 64 RTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ YT + + E+V+ + ++ + ++ F K+ + A
Sbjct: 279 EFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASA 338
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L + I C P++IT +++ R G VN L+ + M + + +Y+ L++
Sbjct: 339 LGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISA 398
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K RL R + +S I P Y +ID + ++GNI+E+ + +M +++ +P
Sbjct: 399 LCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEM-EEKCKPD 457
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ LI G+ A+ IF +M +S
Sbjct: 458 KLTFTILIIGHCMKGRTPEAIGIFYKMLAS 487
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 7/274 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+ V A LL+ + K F PN +Y V+ + +D + + +++ S
Sbjct: 255 LHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSG 314
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ ++ F+ D L ++++ ++I + +I + ++ + L
Sbjct: 315 TKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGL 374
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + +L TY++++ L + R+ + N +K++ +VP YN +++
Sbjct: 375 DLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGY 434
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +D EM E KPD LT+T LI G E++ +F M P
Sbjct: 435 CKSGNIDEANAIVAEM-EEKCKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDD 493
Query: 244 YVYRSLIDNLKKMGKVDLAM----TIFEEMNSSL 273
R+L L K G A T+FE S L
Sbjct: 494 ITIRTLSSCLLKSGMPGEAARIKETLFENQESIL 527
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+++ S N ++ + ++ A L++D ++ PD ++ R +
Sbjct: 101 RLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFD 160
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
A + +GV D I YN LN L K RLD + FRE+ S D T+ LI
Sbjct: 161 VSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILI 220
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+++E+ L DM P I Y L+ L ++ +VD A + EE+
Sbjct: 221 RGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEV 274
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN++L L + G N + SM+ G +PD L+++ R D+ E
Sbjct: 110 TYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEA 169
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
SG++ D++ Y ++ + +++++ LF ++ + + + LI L G V
Sbjct: 170 QCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDV 229
Query: 260 DLAMTIFEEMNS 271
D A + +M S
Sbjct: 230 DEAFELLGDMGS 241
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 100/179 (55%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++E+++ +++ NR+I + ++ ++ +L +F+ ++ + C+PD +TY ++D+ +
Sbjct: 90 LDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAK 149
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + + + M+ AG PD +Y+ +++ L K +L+ F EM + G P L+T
Sbjct: 150 AGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVT 209
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +ID + G + +L+L++D+++ P Y +++ L G ++ A +FEEM
Sbjct: 210 YNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEM 268
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
K D+ TY +L ILGR + + N M G P+ ++YN L++ + LD L
Sbjct: 64 KHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLK 123
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F M G +PD +TY LID + G + ++ L+ M+ RP + Y +I L
Sbjct: 124 LFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLG 183
Query: 255 KMGKVDLAMTIFEEMN 270
K GK++ A +F EM
Sbjct: 184 KAGKLNAAYKLFCEMT 199
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ ++ A +F + P L+TYNI++D+ + G+ + L ++ ++E G
Sbjct: 178 IIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVG 237
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y ++ L ++ F EM +G D + ++D +G+TGN E++
Sbjct: 238 YAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAA 297
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ FN M ++P++ SL+ + D A + M
Sbjct: 298 QWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGM 338
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + +P S++ N II AK+ + + AL ++ ++ + PD +TY I++++L
Sbjct: 194 LFCEMTDRGYAP-SLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVL 252
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + D F M+ AG V D + +++ K + +F M +SG++P++
Sbjct: 253 GNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNV 312
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+L+ ++ R+ + + + M + + P++ Y SL+ +
Sbjct: 313 PACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSS 356
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K+AG D +Y T+L L + + D+ EM G +P+++TY LI +GR ++
Sbjct: 59 KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ SL+LFN M+ P Y +LID K G D AM ++ +M +
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHA 166
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 94/170 (55%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I ++ K+ ++++A + D + C+P+ I Y+ ++D +VG++++ F
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E G P+ +Y++L++ L K +RLDL L M E+ P+++ YT +ID +
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G +E+ RL + M+++ P++ Y ++ID K GKVD + + +M +
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC AG A +++ + K F+P+ Y+ V+ + +D +F + +++ +
Sbjct: 455 LCGAGKFEKAYSIIREMMSKG-FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
YT +F Q + +E+V+ +++ +I A+ K+R++ A +F
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD-------------- 172
+ + C P+++TY ++D + G++ +A M+ +PD
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD 633
Query: 173 --FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+Y L++ L K ++ M G +P+ + Y ALID F + G ++E+ +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M ++ P++Y Y SLID L K ++DLA+ + M
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 129/291 (44%), Gaps = 23/291 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND-------IDLSFQI 55
N I C++G+ S A +LL+ + D +L+ N+ ++L+ +
Sbjct: 373 NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKA 432
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
++L + L+ +N AR + I E++ +++I
Sbjct: 433 YGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCN 492
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ +++ A L+F+ +K PD+ TY I++D +VG + F M G P+ ++
Sbjct: 493 ASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVT 552
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y L++ K R++ F M G P+++TYTALID ++G IE++ +++ M+
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Query: 236 QQ---------------QIR-PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
IR P+I+ Y +L+D L K KV A + + M+
Sbjct: 613 GNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
IV + +I F K ++++A ++F + P++ TY+ ++D L + R++ L +
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E P+ I Y +++ L K+ + D M E G P+++TYTA+ID FG+ G
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+++ L L M + P+ YR LI++ G +D A + +EM +
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQT 840
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 135/327 (41%), Gaps = 50/327 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR---------------DKNIFLPN--AYNCVLVASAETND 48
I+ CK+G + A ++ +R D NI PN Y ++ + +
Sbjct: 592 IDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHK 651
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+ + +L + V + Y F + + ++ + ++ +
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++++ AL + + C P++I Y ++D L +VG+ ++ + M+E G
Sbjct: 712 LIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ ++Y +++ K ++D CL R+MG G P+ +TY LI+ G ++++
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAH 831
Query: 229 RLFNDMKQQQIR---------------------------------PSIYVYRSLIDNLKK 255
+L ++MKQ P I YR LID+ K
Sbjct: 832 QLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891
Query: 256 MGKVDLAMTIFEEMNSSLSDLAGPKDF 282
G+++LA+ + + M+S S A KD
Sbjct: 892 AGRLELALELHKXMSSCTSYSAADKDL 918
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 55/314 (17%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LCKAG A+ L++ +++ Y ++ E + + + L SR
Sbjct: 273 FVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGLCEASLFEEAMDFL------SR 324
Query: 65 TLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESII----VVNRIIFAFAKSRQ 118
SS C N I+ C + L + ++ + E + N +I A+ +S
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIV------------LDIL-------GRVGRVNDMLN 159
A + + C+P + YNI+ LD+L G + + +LN
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 160 E----------------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+ M G +PD +Y+ ++ L ++D + F
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM + + PD+ TYT LIDSF + G ++++ + F++M + P++ Y +LI K
Sbjct: 505 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 564
Query: 258 KVDLAMTIFEEMNS 271
K+ A +FE M S
Sbjct: 565 KMSSANELFEMMLS 578
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 117/271 (43%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I+ CK G + A + + ++ + PN Y + D +DL+ ++L +L +S
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERG-YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736
Query: 64 RTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT TD+ +L+ +EE + P +++ +I F K+ +++
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE--KGCHP-NVVTYTAMIDGFGKAGKVD 793
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K L + + C P+ +TY ++++ G ++D MK+ Y ++
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVI 853
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
R + L E+ E+ P + Y LIDSF + G +E +L L M
Sbjct: 854 EGFN--REFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSY 911
Query: 241 PSIY--VYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +Y SLI++L KVD A ++ +M
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADM 942
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+++ R G N L E +K+ G P ++YN L+ + RLD + REM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
SG D T + + G E+L L +++++ + +Y +I L + +
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 262 AMTIFEEMNSS 272
AM M SS
Sbjct: 318 AMDFLSRMRSS 328
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 126/316 (39%), Gaps = 53/316 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I K C+ G + A+ L L+D + P+ YN ++ E + +D ++ + +++
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLG-YKPSRLTYNALVRVFLEADRLDTAYLVHREM- 258
Query: 61 VSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIE-EVVQIASPESIIVVNRIIFAFAKSR 117
S + D YT F + L IE E ++ + ++ ++I ++
Sbjct: 259 -SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDT----VIYTQMISGLCEAS 313
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVL------DILGRVGRV----------------N 155
E+A+ ++ C P+++TY I+L LGR R+ N
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN 373
Query: 156 DMLNEFA-------------SMKEAGVVPDFISYNTLLNN------LRKIRRLDLCLIYF 196
+++ + M + G P ++ YN L+ L + L+L +
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM ++ + + + + L G E++ + +M + P Y +I L
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493
Query: 257 GKVDLAMTIFEEMNSS 272
KVD A +FEEM S+
Sbjct: 494 SKVDNAFLLFEEMKSN 509
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 80/136 (58%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD + Y +V+ R G ++D L M G +PD ++YNTLLN L K RRL
Sbjct: 14 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
EM E G+ PDL T+T LI + G ++++L+LF+ M Q++RP I Y +LID + +
Sbjct: 74 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133
Query: 256 MGKVDLAMTIFEEMNS 271
G +D A ++++M+S
Sbjct: 134 QGDLDKANDLWDDMHS 149
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 1/170 (0%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P+ +I +I F ++ + AL + D + G C PD++TYN +L+ L + R+ D
Sbjct: 14 PDGVIYT-MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 72
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
M+E GV PD ++ TL++ +LD L F M ++PD++TY LID
Sbjct: 73 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 132
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
R G+++++ L++DM ++I P+ Y LID+ + G+V+ A +EM
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 91/180 (50%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ E+ + P + +I + +++KAL +FD + + +PD++TYN ++D +
Sbjct: 73 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 132
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R G ++ + + M + P+ ++Y+ L+++ + +++ + EM GI P+++
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY ++I + R+GN+ + + M ++ P + Y +LI K K+ A + M
Sbjct: 193 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 15/244 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C G + A++L ++ ++ + P+ YN ++ D+D + + D+
Sbjct: 93 IHGYCIEGKLDKALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWDDMH--- 148
Query: 64 RTLSSDCYTNFARAFIMTD-DCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSR 117
S + + N I+ D C + + F++E++ +I+ N II + +S
Sbjct: 149 ---SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 205
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ K + K PDLITYN ++ + +++D M++ V PD ++YN
Sbjct: 206 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYN 265
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + F +M GI+PD TY ++I+ GN +E+ +L ++M Q+
Sbjct: 266 MLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 325
Query: 238 QIRP 241
P
Sbjct: 326 GFAP 329
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
F RA +M+D L +E+V ++ N ++ K R++ A + + ++
Sbjct: 25 GFCRAGLMSD----ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 80
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
PDL T+ ++ G+++ L F +M + PD ++YNTL++ + + LD
Sbjct: 81 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 140
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ +M I P+ +TY+ LIDS G +E++ ++M + I P+I Y S+I
Sbjct: 141 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 200
Query: 253 LKKMGKVDLAMTIFEEM 269
+ G V ++M
Sbjct: 201 YCRSGNVSKGQKFLQKM 217
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + + Q+E A D + P+++TYN ++ R G V+ M
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V PD I+YNTL++ K ++ M + ++PD++TY LI+ F GN++E+
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 281
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F M + I P Y Y S+I+ G A + +EM
Sbjct: 282 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 322
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C+ G V A L + +K I LPN YN ++ + ++ + L+ ++V+
Sbjct: 163 IDSHCEKGQVEDAFGFLDEMINKGI-LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221
Query: 64 RTLSSDCYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y +I D D +LL +E+ + P+ ++ N +I F+ ++
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEK--EKVQPD-VVTYNMLINGFSVHGNVQ 278
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+A IF+ + +PD TY +++ G + M + G PD
Sbjct: 279 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+ Y REM G+ PD + YT +I F R G + ++LR+ ++M P + Y +L++
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60
Query: 253 LKKMGKVDLAMTIFEEM 269
L K ++ A + EM
Sbjct: 61 LCKERRLLDAEGLLNEM 77
>gi|356573733|ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Glycine max]
Length = 752
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 4/246 (1%)
Query: 27 DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD-CYTNFARAFIMTDDCT 85
DK F+PN + + A D+D + + + + SD CY D
Sbjct: 81 DKLQFVPNMTH-IAQALKVVGDVDACLSLFRWAKRQAWYVPSDDCYVMLFDGLNQKRDFE 139
Query: 86 QL-LIFIEEVVQIASPESIIVV-NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI 143
+ L+F E V A S+ NR+I AK+ ++E + F I CK D TYN
Sbjct: 140 GIQLLFDEMVGDSADGVSLFAACNRVIRYLAKAEKLEVSFCCFKKILNAGCKVDTETYNS 199
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++ + G + SM++AG D +Y ++ NL K RLD F+EM G
Sbjct: 200 LITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKVRG 259
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+P L + +L+DS G+ G ++ +++++ +M+ +P +Y SLI++ K GK++ A+
Sbjct: 260 FRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGKLETAL 319
Query: 264 TIFEEM 269
+++EM
Sbjct: 320 RLWDEM 325
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 90/166 (54%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F KA +++ ++ C D TY +++ L + GR++ F MK
Sbjct: 198 NSLITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKV 257
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G P + +L++++ K RLD + + EM G KP Y +LI+S+ ++G +E
Sbjct: 258 RGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGKLET 317
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+LRL+++M+ RP+ +Y +I++ K GK+++AM+ F +M +
Sbjct: 318 ALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKA 363
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 112/238 (47%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
A N V+ A+ +++SF K +L + + ++ Y + F+ + E +
Sbjct: 161 ACNRVIRYLAKAEKLEVSFCCFKKILNAGCKVDTETYNSLITLFLNKGLPYKAFEMYESM 220
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ +I AKS +++ A +F +K +P L + ++D +G+ GR+
Sbjct: 221 EKAGCSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRL 280
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + + M+ G P Y +L+ + K +L+ L + EM +G +P+ YT +
Sbjct: 281 DSAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLI 340
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+S ++G +E ++ F DM++ P+ Y L++ G++D AM ++ M ++
Sbjct: 341 IESHAKSGKLEIAMSTFLDMEKAGFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNA 398
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 84/167 (50%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V ++ + K+ +++ A+ ++ ++G KP Y +++ + G++ L + M
Sbjct: 266 VFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGKLETALRLWDEM 325
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ AG P+F Y ++ + K +L++ + F +M ++G P TY L++ +G I
Sbjct: 326 RMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKAGFLPTPSTYACLLEMHAASGQI 385
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +++L+N M +RP + Y L+ L VD+A I EM +
Sbjct: 386 DPAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 432
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 111/284 (39%), Gaps = 37/284 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L K+G + AA +L Q ++ + F P N + ++ + + +D + ++ ++
Sbjct: 236 IPNLAKSGRLDAAFKLFQEMKVRG-FRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYG 294
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + +++ + L +E+ + + II + AKS ++E A+
Sbjct: 295 YKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAM 354
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F ++ P TY +L++ G+++ + + SM AG+ P +Y LL L
Sbjct: 355 STFLDMEKAGFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLTLL 414
Query: 184 R----------------------------------KIRRLDLCLIYFREMGESGIKPDLL 209
K +DL L + R MG SGI+ +
Sbjct: 415 ANKKLVDVAAKILLEMKAMGYSVDVTASDILMVYIKEGSVDLALRWLRFMGSSGIRTNNF 474
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
L +S ++G E + L + + +Y S++ +L
Sbjct: 475 IIRQLFESCMKSGLFESAKPLLETYVNSAAKVDLILYTSILAHL 518
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 56/304 (18%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I KA VS A L +++ + LPN Y+ ++ + ++ + QI + + S
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSALIDGHCKAGQMEKACQIFERMCGSK 618
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
D Y F DD + ++++ ++ F K ++E+A
Sbjct: 619 DVPDVDMY------FKQYDD------------DNSERPNVVIYGALLDGFCKLHRVEEAR 660
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + C+P+ I Y+ ++D L +VG++++ A M E G +Y++L++
Sbjct: 661 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRY 720
Query: 184 RKIRRLDLC----------------LIY-------------------FREMGESGIKPDL 208
K++R DL +IY + M E G +P++
Sbjct: 721 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 780
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TYTA+ID FGR G IE L L M + + P+ YR LID+ K G +D+A + EE
Sbjct: 781 VTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 840
Query: 269 MNSS 272
M +
Sbjct: 841 MKQT 844
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 10/248 (4%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P +N ++ A + D ++++LK ++ T Y + D L +
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKD--SLSCHLL 429
Query: 93 EVVQIASPESI---IVVNRI-IFAFAK----SRQIEKALLIFDHIKGLKCKPDLITYNIV 144
E+ + A E + +V+N+I + +F + + + EKA + + G PD TY+ V
Sbjct: 430 ELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
L L ++ F MK G+V D +Y ++++ K ++ +F EM E G
Sbjct: 490 LGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
P+++TYTALI ++ + + + LF M + P+I Y +LID K G+++ A
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQ 609
Query: 265 IFEEMNSS 272
IFE M S
Sbjct: 610 IFERMCGS 617
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 132/294 (44%), Gaps = 28/294 (9%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILK--- 57
N + C +G+ S A +LL+ + K P YN +L+ S + LS +L+
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMV-KCGHTPGYVVYN-ILIGSICGDKDSLSCHLLELAE 433
Query: 58 ----DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
++L + L+ ++F R + I E++ ++++
Sbjct: 434 KAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYL 493
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ ++E A L+F+ +K D+ TY I++D + G + F M+E G P+
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN- 232
++Y L++ K +++ F M G P+++TY+ALID + G +E++ ++F
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFER 613
Query: 233 ----------DMKQQQI------RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
DM +Q RP++ +Y +L+D K+ +V+ A + + M+
Sbjct: 614 MCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMS 667
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ ++++ + ++++ +I K + ++A + ++ C+P+++TY ++D GR
Sbjct: 733 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGR 792
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G++ L M GV P++++Y L+++ K LD+ EM ++
Sbjct: 793 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAG 852
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I+ F + ESL L +++ Q P + +YR L+DNL K ++++A+ + EE+
Sbjct: 853 YRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVA 910
Query: 271 S 271
+
Sbjct: 911 T 911
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 21/238 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G A +L+Q + +K PN Y ++ I+ ++L+
Sbjct: 752 IDGLCKVGKTDEAYKLMQMMEEKGC-QPNVVTYTAMIDGFGRIGKIETCLELLE------ 804
Query: 64 RTLSSDCYTNFARAFIMTDDCTQ------LLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
R S N+ ++ D C + +EE+ Q P ++I F K
Sbjct: 805 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK-- 862
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGVVPDFI 174
+ ++L + D I P L Y +++D L + R+ +L E A+ A +V
Sbjct: 863 EFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFS-ATLVDYSS 921
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+YN+L+ +L ++D F EM + G+ P++ T+ +LI R I E+L L +
Sbjct: 922 TYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLD 979
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 127/303 (41%), Gaps = 46/303 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA---YNCVLVASAETNDIDLSFQILKDLLVS 62
I+ LCK G + A + + + P Y+ ++ + DL+ ++L +L +
Sbjct: 682 IDGLCKVGKLDEAQEVKAEMSEHG--FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 739
Query: 63 SRTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + YT TD+ +L+ +EE + P +++ +I F + +I
Sbjct: 740 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE--KGCQP-NVVTYTAMIDGFGRIGKI 796
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA------------ 167
E L + + + P+ +TY +++D + G ++ N MK+
Sbjct: 797 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKV 856
Query: 168 --GVVPDFIS-------------------YNTLLNNLRKIRRLDLCLIYFREMGE-SGIK 205
G +FI Y L++NL K +RL++ L E+ S
Sbjct: 857 IEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATL 916
Query: 206 PDLL-TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
D TY +LI+S ++++ RLF++M ++ + P + + SLI L + K+ A+
Sbjct: 917 VDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALL 976
Query: 265 IFE 267
+ +
Sbjct: 977 LLD 979
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 50/118 (42%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD + Y ++ L + ++ M+ +P+ ++Y+TLL ++L C
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
M G P + +L+ ++ +G+ + +L M + P VY LI ++
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSI 417
>gi|341605781|gb|AEK82993.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605783|gb|AEK82994.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIXLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++ L + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIXLLHRM 78
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 99/180 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+V+ + + NR+I ++ ++ +++A+ +F+ ++ C+PD +TY ++DI
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+EAG+ PD +Y+ ++N L K L F EM G P+L+
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+ +I + N E +L+L+ DM+ +P Y +++ L G ++ A +F EM
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 89/164 (54%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ +++Q + + D + CKP+ +TYN ++ GR + + +N F M+EAG
Sbjct: 365 MVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAG 424
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K LD+ + ++ M E+G+ PD TY+ +I+ G+ G++ +
Sbjct: 425 CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAH 484
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
RLF +M Q P++ + +I K + A+ ++ +M ++
Sbjct: 485 RLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q +P +++ N +I AK+R E AL ++ ++ +PD +TY+IV+++L
Sbjct: 486 LFCEMVGQGCTP-NLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVL 544
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + FA M+ VPD Y L++ K +D +++ M ++G++P++
Sbjct: 545 GHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNV 604
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R + E+ L M + PS+ Y L+
Sbjct: 605 PTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + G C P+L+T+NI++ + + L + M+ AG
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM PD Y L+D +G+ GN++++
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M Q +RP++ SL+ ++ ++ A + + M
Sbjct: 590 QWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 135 KPDLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
K D TY ++ LGR G +N +L+E M G P+ ++YN L+++ + L
Sbjct: 356 KHDGHTYTTMVGNLGRAKQFGEINKLLDE---MVRDGCKPNTVTYNRLIHSYGRANYLKE 412
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ F +M E+G +PD +TY LID + G ++ ++ ++ M++ + P + Y +I+
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K G + A +F EM
Sbjct: 473 CLGKAGHLPAAHRLFCEM 490
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ NL + ++ EM G KP+ +TY LI S+GR +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E++ +FN M++ P Y +LID K G +D+AM +++ M +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA 458
>gi|359487102|ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 390
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I A S ++ ++ +F +K + C+P+++TYN ++ +L GR+ + F
Sbjct: 207 VVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFD 266
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+E G P+ I+Y+ + K +++ L F M SG++P + TY L+ FGR G
Sbjct: 267 QMREKGYAPNVITYHCFFGCIEKPKQI---LRTFDRMINSGVRPRMDTYVMLMKKFGRWG 323
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ M++Q P Y +LID L + G VDLA EEM
Sbjct: 324 FLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEM 370
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
CK L +Y+I +DI + G+ + + MK+ G+ D ++YNT++ + +D +
Sbjct: 169 CK-SLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSI 227
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
FREM E G +P+++TY +I G I E+ +F+ M+++ P++ Y +
Sbjct: 228 RVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCI 287
Query: 254 KKMGKV 259
+K ++
Sbjct: 288 EKPKQI 293
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 4/201 (1%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSS 63
Y++ CK+G AV+L + ++ K I L AYN V+ A + +D S ++ +++
Sbjct: 178 YMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVG 237
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + +++ + ++I + K +QI L
Sbjct: 238 CEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQI---L 294
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
FD + +P + TY +++ GR G + + + M+E G PD +YN L++ L
Sbjct: 295 RTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDAL 354
Query: 184 RKIRRLDLCLIYFREMGESGI 204
+ +DL Y EM G+
Sbjct: 355 VQKGMVDLARKYEEEMLAKGL 375
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 27/194 (13%)
Query: 102 SIIVVNRIIFAFAKSRQ--------IEKALLIFDHIK---GLKCKPDLITYNIVLDILGR 150
II N F + RQ ++AL FD ++ G D TYN ++DILG+
Sbjct: 43 PIISPNSTSFDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTD--TYNGMIDILGK 100
Query: 151 VGRVNDMLNEFASMKEAGVV-PDFISY-------------NTLLNNLRKIRRLDLCLIYF 196
+ + MK V P+ +++ +L K+ C ++
Sbjct: 101 FFEFDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAAAHLVEEILRGWFKMGWWKKCREFW 160
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM G+ L +Y+ +D ++G +++L+ +MK++ IR + Y ++I +
Sbjct: 161 EEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLS 220
Query: 257 GKVDLAMTIFEEMN 270
VD ++ +F EM
Sbjct: 221 EGVDFSIRVFREMK 234
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 100/183 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E++V+ +++ NR+I ++ ++ + +AL +F+ ++ + C+PD +TY ++DI
Sbjct: 405 LLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHA 464
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+E G+ PD +Y+ ++N L K L F EM + G P+++
Sbjct: 465 KAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIV 524
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY LI + N + +L L+ DM+ +P Y +++ L G ++ A +F EM
Sbjct: 525 TYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEM 584
Query: 270 NSS 272
+
Sbjct: 585 RQN 587
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 140 TYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
TY ++ ILGR G +N +L + M + G P+ ++YN L+++ + L L F
Sbjct: 385 TYTTMVGILGRAREFGAINKLLEQ---MVKDGCQPNVVTYNRLIHSYGRANYLREALNVF 441
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
+M E G +PD +TY LID + G ++ ++ ++ M++ + P + Y +I+ L K
Sbjct: 442 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 501
Query: 257 GKVDLAMTIFEEM 269
G + A +F EM
Sbjct: 502 GNLSAAHRLFCEM 514
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q P +I+ N +I AK+R + AL ++ ++ KPD +TY+IV+++L
Sbjct: 510 LFCEMVDQGCVP-NIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVL 568
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + F M++ VPD Y L++ K ++ ++ M +G+ P++
Sbjct: 569 GHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNV 628
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R + ++ L +M + PS+ Y L+
Sbjct: 629 PTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLL 670
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 78/161 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I KS + A +F + C P+++TYNI++ + + L + M+ AG
Sbjct: 494 MINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAG 553
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM ++ PD Y L+D +G+ GN+E++
Sbjct: 554 FKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAW 613
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ M + + P++ SL+ ++ ++ A + + M
Sbjct: 614 EWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNM 654
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ L + R +M + G +P+++TY LI S+GR +
Sbjct: 375 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 434
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+L +FN M++ P Y +LID K G +D+AM+++E M
Sbjct: 435 REALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERM 479
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 38/212 (17%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L K+GN+SAA RL + D+ +PN YN ++ A+ + + ++ +D+
Sbjct: 495 INCLGKSGNLSAAHRLFCEMVDQGC-VPNIVTYNILIALQAKARNYQTALELYRDM---- 549
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
A D T ++ EV+ +E+A
Sbjct: 550 -----------QNAGFKPDKVTYSIVM--EVL------------------GHCGYLEEAE 578
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ PD Y +++D+ G+ G V + +M AG++P+ + N+LL+
Sbjct: 579 AVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAF 638
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ RL + M G+ P L TYT L+
Sbjct: 639 LRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLL 670
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 127/265 (47%), Gaps = 9/265 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQS--LRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
N I LCK G V AV +L LRD F PN YN ++ + N ++ + ++ +
Sbjct: 355 NSLIFGLCKLGEVEEAVEILNQMILRD---FSPNTVTYNTLISTLCKENQVEEATELAR- 410
Query: 59 LLVSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+L S L C + + + +T++ + EE+ N +I +
Sbjct: 411 VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRG 470
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++E+AL + ++ C +++TYN ++D + R+ + F M+ G+ + ++YN
Sbjct: 471 RLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ L K RR++ +M G+KPD TY +L+ F R G+I+++ + M
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN 590
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLA 262
P Y +LI L K G+V+LA
Sbjct: 591 GCEPDSVTYGTLILGLSKAGRVELA 615
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 132/282 (46%), Gaps = 23/282 (8%)
Query: 3 NGYIEKLCKAGNVSAAVR----LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N + LC+ G+V A+ +LQ D +IF YN ++ + +++ + +IL
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEGFDPDIF---TYNSLIFGLCKLGEVEEAVEILNQ 376
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS--------PESIIVVNRII 110
+++ + ++ Y + +EE ++A P+ + N +I
Sbjct: 377 MILRDFSPNTVTYNTLISTLCKENQ-------VEEATELARVLTSKGILPD-VCTFNSLI 428
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
+ A+ +F+ +K C PD TYN+++D L GR+ + L+ M+ +G
Sbjct: 429 QGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCS 488
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+ ++YNTL++ K +R++ F EM GI +++TY LID + +EE+ +L
Sbjct: 489 RNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQL 548
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ M + ++P + Y SL+ + G + A I + M S+
Sbjct: 549 MDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN 590
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 4/240 (1%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFI 91
+N ++ A + I + +++++ S LS D +T + FI + L
Sbjct: 212 TTFNILIKALCRAHQIRPAILMMEEM--GSYGLSPDEKTFTTLMQGFIEEGNMNGALRIR 269
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++V P S + VN ++ + K +IE+ L D + +PD T+N +++ L R+
Sbjct: 270 EQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRI 329
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G V L M + G PD +YN+L+ L K+ ++ + +M P+ +TY
Sbjct: 330 GHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTY 389
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LI + + +EE+ L + + I P + + SLI L LAM +FEEM +
Sbjct: 390 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKT 449
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 4/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
+ KL K G+ + R+LQ ++ + +L+ S A+ D + ++ D++
Sbjct: 112 LRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVV-DIMEEEF 170
Query: 65 TLSSDCYT-NFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
L D +T NF ++ + +L+ I +V + N +I A ++ QI A
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPA 230
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+L+ + + PD T+ ++ G +N L M AG ++ N L++
Sbjct: 231 ILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHG 290
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K R++ L + EM G +PD T+ +L++ R G+++ +L + + M Q+ P
Sbjct: 291 YCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPD 350
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+ Y SLI L K+G+V+ A+ I +M
Sbjct: 351 IFTYNSLIFGLCKLGEVEEAVEILNQM 377
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK V A L + L K I LP+ +N ++ TN+ L+ ++ +++
Sbjct: 390 NTLISTLCKENQVEEATELARVLTSKGI-LPDVCTFNSLIQGLCLTNNHRLAMELFEEMK 448
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + L ++E+ +++ N +I F K+++IE
Sbjct: 449 TKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIE 508
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IFD ++ +++TYN ++D L + RV + M G+ PD +YN+LL
Sbjct: 509 EAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + M +G +PD +TY LI + G +E + RL ++ + +
Sbjct: 569 TYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV 628
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +I L + + A+ +F EM
Sbjct: 629 LAPQTYNPVIKALFREKRTSEAVRLFREM 657
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 3/257 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC N A+ L + ++ K P+ YN ++ + ++ + +LK++
Sbjct: 425 NSLIQGLCLTNNHRLAMELFEEMKTKGCH-PDEFTYNMLIDSLCSRGRLEEALSLLKEME 483
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + + Y F + +E+ +++ N +I K+R++E
Sbjct: 484 SSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVE 543
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D + KPD TYN +L R G + + +M G PD ++Y TL+
Sbjct: 544 EAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLI 603
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K R++L R + G+ TY +I + R E++RLF +M ++
Sbjct: 604 LGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDP 663
Query: 241 PSIYVYRSLIDNLKKMG 257
P Y+ + L G
Sbjct: 664 PDAVTYKVVFRGLCSGG 680
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 94/170 (55%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I ++ K+ ++++A + D + C+P+ I Y+ ++D +VG++++ F
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E G P+ +Y++L++ L K +RLDL L M E+ P+++ YT +ID +
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G +E+ RL + M+++ P++ Y ++ID K GKVD + + +M +
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC AG A +++ + K F+P+ Y+ V+ + +D +F + +++ +
Sbjct: 455 LCGAGKFEKAYSIIREMMSKG-FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVP 513
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
YT +F Q + +E+V+ +++ +I A+ K+R++ A +F
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD-------------- 172
+ + C P+++TY ++D + G++ +A M+ +PD
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD 633
Query: 173 --FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+Y L++ L K ++ M G +P+ + Y ALID F + G ++E+ +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M ++ P++Y Y SLID L K ++DLA+ + M
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 129/291 (44%), Gaps = 23/291 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND-------IDLSFQI 55
N I C++G+ S A +LL+ + D +L+ N+ ++L+ +
Sbjct: 373 NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKA 432
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
++L + L+ +N AR + I E++ +++I
Sbjct: 433 YGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCN 492
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ +++ A L+F+ +K PD+ TY I++D +VG + F M G P+ ++
Sbjct: 493 ASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVT 552
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y L++ K R++ F M G P+++TYTALID ++G IE++ +++ M+
Sbjct: 553 YTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612
Query: 236 QQ---------------QIR-PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
IR P+I+ Y +L+D L K KV A + + M+
Sbjct: 613 GNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMS 663
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 136/327 (41%), Gaps = 50/327 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR---------------DKNIFLPN--AYNCVLVASAETND 48
I+ CK+G + A ++ +R D NI PN Y ++ + +
Sbjct: 592 IDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHK 651
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+ + +L + V + Y F + + ++ + ++ +
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++++ AL + + C P++I Y ++D L +VG+ ++ + M+E G
Sbjct: 712 LIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ ++Y +++ K ++D CL R+MG G P+ +TY LI+ G ++++
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAH 831
Query: 229 RLFNDMKQQQIR---------------------------------PSIYVYRSLIDNLKK 255
+L ++MKQ P I YR LID+ K
Sbjct: 832 QLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891
Query: 256 MGKVDLAMTIFEEMNSSLSDLAGPKDF 282
G+++LA+ + +EM+S S A KD
Sbjct: 892 AGRLELALELHKEMSSCTSYSAADKDL 918
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I+ CK G + A + + ++ + PN Y + D +DL+ ++L +L +S
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERG-YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736
Query: 64 RTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT TD+ +L+ +EE +++ +I F K+ +++
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK---GCHPNVVTYTAMIDGFGKAGKVD 793
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K L + + C P+ +TY ++++ G ++D MK+ Y ++
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVI 853
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
R + L E+ E+ P + Y LIDSF + G +E +L L +M
Sbjct: 854 EGFN--REFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSY 911
Query: 241 PSIY--VYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +Y SLI++L KVD A ++ +M
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADM 942
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 55/314 (17%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LCKAG A+ L++ +++ Y ++ E + + + L SR
Sbjct: 273 FVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGLCEASLFEEAMDFL------SR 324
Query: 65 TLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESII----VVNRIIFAFAKSRQ 118
SS C N I+ C + L + ++ + E + N +I A+ +S
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIV------------LDIL-------GRVGRVNDMLN 159
A + + C+P + YNI+ LD+L G + + +LN
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 160 E----------------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+ M G +PD +Y+ ++ L ++D + F
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM + + PD+ TYT LIDSF + G ++++ + F++M + P++ Y +LI K
Sbjct: 505 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 564
Query: 258 KVDLAMTIFEEMNS 271
K+ A +FE M S
Sbjct: 565 KMSSANELFEMMLS 578
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+++ R G N L E +K+ G P ++YN L+ + RLD + REM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
SG D T + + G E+L L +++++ + +Y +I L + +
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 262 AMTIFEEMNSS 272
AM M SS
Sbjct: 318 AMDFLSRMRSS 328
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 23/237 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL---- 59
I+ LCK G A RL+ + +K PN Y ++ + +D ++++ +
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCH-PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
V+ R L + C A + DD QLL +E+ Q P+ + ++I F
Sbjct: 807 CAPNFVTYRVLINHCC-----AAGLLDDAHQLL---DEMKQTYWPKHMAGYRKVIEGF-- 856
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV--VPDF 173
+R+ +L + D I P + Y I++D + GR+ L M D
Sbjct: 857 NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADK 916
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
Y++L+ +L ++D + +M + G P+L + L+ R EE+L+L
Sbjct: 917 DLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 126/316 (39%), Gaps = 53/316 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I K C+ G + A+ L L+D + P+ YN ++ E + +D ++ + +++
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLG-YKPSRLTYNALVRVFLEADRLDTAYLVHREM- 258
Query: 61 VSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIE-EVVQIASPESIIVVNRIIFAFAKSR 117
S + D YT F + L IE E ++ + ++ ++I ++
Sbjct: 259 -SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDT----VIYTQMISGLCEAS 313
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVL------DILGRVGRV----------------N 155
E+A+ ++ C P+++TY I+L LGR R+ N
Sbjct: 314 LFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN 373
Query: 156 DMLNEFA-------------SMKEAGVVPDFISYNTLLNN------LRKIRRLDLCLIYF 196
+++ + M + G P ++ YN L+ L + L+L +
Sbjct: 374 SLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAY 433
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM ++ + + + + L G E++ + +M + P Y +I L
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493
Query: 257 GKVDLAMTIFEEMNSS 272
KVD A +FEEM S+
Sbjct: 494 SKVDNAFLLFEEMKSN 509
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +N+ +M+ +GV PD +Y+ L+N L K ++D + F EM + G+ P+ +
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L +NI++ + G + + F ++ + G+ P +S+NTL+N K+ L+
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG++PD+ TY+ LI+ + ++++ LF++M + + P+ + +LID K G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 258 KVDLAMTIFEEM-NSSLS 274
+VDLAM I+++M + SLS
Sbjct: 256 RVDLAMEIYKQMLSQSLS 273
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A ++FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 42/242 (17%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + DK + +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANVLFDEMLDKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D + KGLK PD TY ++D + G + M + + D ++Y L++
Sbjct: 297 DLIDEMIMKGLK--PDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R REM G+KP++ TYT +I+ F + G++ +L +M++ +P
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKP 414
Query: 242 SI 243
S+
Sbjct: 415 SV 416
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ +I K+ +++ A+ I+ + PDLITYN ++ L + G + +
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ PD +Y TL++ K L+ Y + M + I+ D + YTALI + G
Sbjct: 302 MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ ++ +M ++P I Y +I+ K G V + +EM
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQ 408
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G ++ + M +S
Sbjct: 183 KLGDLNEGFRLKNAMQAS 200
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 10/276 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + L V AV L + L +NI PN Y V+ + +F +L+ L+
Sbjct: 146 NTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLR-LM 204
Query: 61 VSSRTLSSDC-YTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
T + C Y+ AF M D T LL E+ Q + P I + +I A K
Sbjct: 205 EQGSTKPNTCIYSIVIDAFCKDGMLDGATSLL---NEMKQKSIPPDIFTYSTLIDALCKL 261
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
Q E +F + L P++ T+N V+D L + G+V D M E GV PD I+Y
Sbjct: 262 SQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITY 321
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N +++ ++D F M I+P++++Y LI+ + R I+E++++ ++ Q
Sbjct: 322 NMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQ 381
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++PSI L+ L ++G+ A F+EM S+
Sbjct: 382 KGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSA 417
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 132/298 (44%), Gaps = 38/298 (12%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G+ A LL+ L ++ PN Y+ V+ A + +D + +L ++ S
Sbjct: 188 LCKKGHTQKAFDLLR-LMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPP 246
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
Y+ A + E++ + ++ N +I K ++E A I
Sbjct: 247 DIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
++ PD+ITYN+++D G G+V+ F SM + P+ ISYN L+N +
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQ 366
Query: 187 RRLDLCLIYFREMGESGIK-----------------------------------PDLLTY 211
+++D + RE+ + G+K PDL T+
Sbjct: 367 KKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTH 426
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+ + + G +EE++ F+ +++++ +I +Y ++ID L K GK+D A FE++
Sbjct: 427 CTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKL 484
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 2/176 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+II N +I +A+ ++I++A+ + I KP ++T N++L L +GR N F
Sbjct: 352 NIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFF 411
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M AG +PD ++ TLL K ++ + +F ++ ++ YTA+ID +
Sbjct: 412 DEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKN 471
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
G ++++ F + + P + Y ++I + G +D A + +M N L+D
Sbjct: 472 GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLAD 527
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 120/286 (41%), Gaps = 11/286 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G V A +++ + +K + P+ YN ++ +D + +I ++
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMRYMIEKGV-DPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + Y + + + E+ Q SI+ N ++ + + +
Sbjct: 346 NKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTK 405
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A FD + PDL T+ +L + G V + ++ F ++ + Y ++
Sbjct: 406 SAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVI 465
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K +LD F ++ G+ PD++TYTA+I + + G ++E+ + M+
Sbjct: 466 DGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCL 525
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKA 286
Y ++ + KV EM + L ++AG K F +A
Sbjct: 526 ADNRTYNVIVRGFLRSNKVS-------EMKAFLEEIAG-KSFSFEA 563
>gi|341605777|gb|AEK82991.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605779|gb|AEK82992.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605809|gb|AEK83007.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605811|gb|AEK83008.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRM 183
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALXKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|15219388|ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
DEFECTIVE 2217; Flags: Precursor
gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis thaliana]
gi|332198129|gb|AEE36250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 117/239 (48%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
NAYN V+ A+ ++++F K S + + Y N F+ + E
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ + S II + AKS +++ A +F +K K +P ++ ++D +G+ GR
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++ + + M+ G P + +L+++ K +LD L + EM +SG +P+ YT
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+I+S ++G +E ++ +F DM++ P+ Y L++ G+VD AM I+ M ++
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 14/285 (4%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLR---------DKNIFLPNAYNCVLVASAETNDIDL 51
M G + A +V+ V ++Q + DK F+PN + + + ++D
Sbjct: 129 MVGGLKKPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVH-ITQSLKIVKEVDA 187
Query: 52 SFQILKDLLVSSRTLSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPE---SIIVVN 107
+ + + L SD CY D + EE+VQ +S S N
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYN 247
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
++I AK+ ++E A F + CK D TYN ++ + G + SM++
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT 307
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ D +Y ++ +L K RLD F++M E ++P +++L+DS G+ G ++ S
Sbjct: 308 DSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS 367
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++++ +M+ RPS ++ SLID+ K GK+D A+ +++EM S
Sbjct: 368 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKS 412
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 2/268 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
I L K+G + AA +L Q ++++ + + LV S + +D S ++ ++
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S+ + + ++ L +E+ + + + II + AKS ++E A+
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMT 439
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F ++ P TY+ +L++ G+V+ + + SM AG+ P SY +LL L
Sbjct: 440 VFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLA 499
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
R +D+ EM G D+ L+ + + +++ +L+ M I+ + +
Sbjct: 500 NKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASVDLALKWLRFMGSSGIKTNNF 558
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ R L ++ K G D A + E + S
Sbjct: 559 IIRQLFESCMKNGLYDSARPLLETLVHS 586
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 7/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G AA+ LL+ D + P+ YN ++ + ++ +F + + + S
Sbjct: 305 INGLCKVGETKAALELLRR-NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV--S 361
Query: 64 RTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + D +T A F + + ++ + + ++ F K I++
Sbjct: 362 KRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKE 421
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + KPD++TY+ ++D V VN + F +M GV + SYN ++N
Sbjct: 422 AKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMIN 481
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
KI+ +D + F+EM I PD++TY++LID ++G I +L L ++M + +P
Sbjct: 482 GFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQP 541
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I Y S++D L K VD A+T+ ++
Sbjct: 542 DIITYNSILDALCKKHHVDKAITLLTKLKG 571
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 125/272 (45%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLL 60
N I C G + A+ L + KNI +P+ Y ++ D I + +L ++
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNI-IPDVYTFSILVDGFCKDGNIKEAKNVLAMMM 430
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y++ + + ++ + + ++ N +I F K + ++
Sbjct: 431 KQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVD 490
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F + + PD+ITY+ ++D L + GR++ L M G PD I+YN++L
Sbjct: 491 EAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSIL 550
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K +D + ++ GI+PD+ TYT L+ ++G +E++ ++F D+ +
Sbjct: 551 DALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y Y +I G D A+ + +M +
Sbjct: 611 LDVYAYTVMIQGFCDKGLFDEALALLSKMEEN 642
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%)
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
T F + F + Q L F ++V+ + + +I K + + AL + G
Sbjct: 267 TTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDG 326
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
+PD++ YN ++D + + VND + ++ + PD +YN L++ + +L
Sbjct: 327 KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKD 386
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ F +M I PD+ T++ L+D F + GNI+E+ + M +Q I+P + Y SL+D
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446
Query: 252 NLKKMGKVDLAMTIFEEMNS 271
+ +V+ A +IF M+
Sbjct: 447 GYCLVNEVNKAESIFNTMSH 466
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK GN+ A +L + ++I P+ Y+ ++ N+++ + I +
Sbjct: 410 VDGFCKDGNIKEAKNVLAMMMKQSI-KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + Y F + + +E+ +I + +I KS +I AL
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + +PD+ITYN +LD L + V+ + +K G+ PD +Y L+ L
Sbjct: 529 ELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +L+ F ++ G D+ YT +I F G +E+L L + M++ P
Sbjct: 589 CQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDA 648
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I +L + + D+A + EM
Sbjct: 649 KTYEIIILSLFEKDENDMAEKLLREM 674
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+PD IT + G+++ L+ + G D +SY TL+N L K+ L
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALE 319
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
R ++PD++ Y +ID + ++ ++ L+++ ++I P ++ Y +LI
Sbjct: 320 LLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFC 379
Query: 255 KMGKVDLAMTIFEEMNS 271
+GK+ A+ +F +M S
Sbjct: 380 IVGKLKDAIDLFNKMTS 396
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 92/238 (38%), Gaps = 40/238 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
+GY C V+ A + ++ + + +YN ++ + +D + ++ K++
Sbjct: 446 DGY----CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHH 501
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
Y++ + + L ++E+ II N I+ A K ++K
Sbjct: 502 KQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDK 561
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND----------------------MLN 159
A+ + +KG +PD+ TY I++ L + G++ D M+
Sbjct: 562 AITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQ 621
Query: 160 EF-------------ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
F + M+E G +PD +Y ++ +L + D+ REM G+
Sbjct: 622 GFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 46/101 (45%)
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G PD I+ T + ++ L + ++ G D ++Y LI+ + G + +
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
L L + ++P + +Y ++ID + K V+ A ++ E
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSE 358
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 125/263 (47%), Gaps = 3/263 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSSRTL 66
LCKA + A+++++ + I +P+A + + S+ ++ + Q++ +
Sbjct: 107 LCKACKMRKAIKVMEMMIGSGI-IPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPT 165
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
++ Y + R M + TQ L ++ ++Q + + ++ A K R ++A +
Sbjct: 166 NTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLL 225
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D I +P+L++YN++L L + GR D + F + G P+ +SYN LL +L
Sbjct: 226 DEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNE 285
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R + + EM P +TY LI S G E +L + +M + + +P+ Y
Sbjct: 286 GRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSY 345
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+I +L K GK+DL + ++M
Sbjct: 346 NPIIAHLCKDGKLDLVVKCLDQM 368
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 9/265 (3%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G A+RL + L K F PN +YN +L + + + +L ++ R+
Sbjct: 247 LCKEGRTEDAIRLFRELPSKG-FSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSP 305
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S+ Y + + L +EE+++ + N II K +++ +
Sbjct: 306 STVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCL 365
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM--KEAGVVPDFISYNTLLNNLR 184
D + C P+ TYN + L G V + + S+ K+ +F Y ++ +L
Sbjct: 366 DQMMYRHCNPNEGTYNAIA-TLCEEGMVQEAFSIIQSLGNKQHSSTQEF--YKIVITSLC 422
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ EM + G PD TY++LI G + E++ +F+ M++ +P
Sbjct: 423 RKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTE 481
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI K + DLA+ +FE M
Sbjct: 482 NYNSLILGCCKSRRTDLALDVFEIM 506
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 4/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LC GN++ +++LL L K + +PNA Y+ +L A+ + D + ++L +++
Sbjct: 171 NSLVRGLCMHGNLTQSLQLLDRLIQKGL-VPNAYTYSFLLEAAYKERGADEASKLLDEII 229
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + E+ +++ N ++ + + E
Sbjct: 230 AKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWE 289
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++ + G + P +TYNI++ L GR L M A P SYN ++
Sbjct: 290 EANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPII 349
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+L K +LDL + +M P+ TY A I + G ++E+ + + +Q
Sbjct: 350 AHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHS 408
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y+ +I +L + G A + EM
Sbjct: 409 STQEFYKIVITSLCRKGNTYPAFQLLYEM 437
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 4/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+ GNV A++L+ + + + N YN ++ ++ S Q+L L+
Sbjct: 139 VSSLCRKGNVGYAMQLVDKMEEYG-YPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y+ A + ++E++ +++ N ++ K + E A+
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAI 257
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + P++++YNI+L L GR + A M P ++YN L+ +L
Sbjct: 258 RLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSL 317
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R + L EM + KP +Y +I + G ++ ++ + M + P+
Sbjct: 318 ALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNE 377
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y + I L + G V A +I + + +
Sbjct: 378 GTYNA-IATLCEEGMVQEAFSIIQSLGN 404
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 89/187 (47%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
T +E +V+ + ++++ K+ ++ KA+ + + + G PD +Y +
Sbjct: 79 TDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFL 138
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+ L R G V + M+E G + ++YN+L+ L L L + + G+
Sbjct: 139 VSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGL 198
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
P+ TY+ L+++ + +E+ +L +++ + P++ Y L+ L K G+ + A+
Sbjct: 199 VPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIR 258
Query: 265 IFEEMNS 271
+F E+ S
Sbjct: 259 LFRELPS 265
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ + + + A+ + D ++ + +TYN ++ L G + L + + G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+VP+ +Y+ LL K R D E+ G +P+L++Y L+ + G E+++
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAI 257
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
RLF ++ + P++ Y L+ +L G+ + A + EMN
Sbjct: 258 RLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ D M E G PD LL +L K ++ + M SGI PD +YT
Sbjct: 77 RLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYT 136
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+ S R GN+ +++L + M++ + Y SL+ L G + ++ + + +
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD TY+ ++ L G +N+ + F+ M+E PD +YN+L+ K RR DL L
Sbjct: 444 PDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNK-PDTENYNSLILGCCKSRRTDLALDV 502
Query: 196 FREMGESGIKPDLLTYTALIDS 217
F M G P+ TYT L++
Sbjct: 503 FEIMVGKGYLPNETTYTILVEG 524
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK-NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC+ G V A ++QSL +K + Y V+ + + +FQ+L ++
Sbjct: 383 IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGF 442
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
T S Y++ R M + + + + P++ N +I KSR+ + AL
Sbjct: 443 TPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTE-NYNSLILGCCKSRRTDLALD 501
Query: 125 IFDHIKGLKCKPDLITYNIVLD 146
+F+ + G P+ TY I+++
Sbjct: 502 VFEIMVGKGYLPNETTYTILVE 523
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC +G + A+ L + +F PN YN ++ E I +F +L + +
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVF-PNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y + + + D + ++ + ++Q +++ N II + S AL
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I D ++ CKPD +Y ++ ++ ++ F M + G+ P+ ++Y L++
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +LD M SG +P++ TY LI + N + L M ++ I P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ID L K G LA+ +F +M
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKM 626
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 34/267 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ C +GN ++A+R+L +RD P+ ++
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGC-KPDEWS------------------------- 497
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YT F E+V + + +I + K +++ A
Sbjct: 498 --------YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +H+K C+P++ TYN+++ L + + M E G+ P+ ++Y +++
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K L L F +M E G P+LLTY++LI + G+ G +EE+ LF ++++ + P
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I+ GKV+ A M
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRM 696
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 118/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK GNV+ A +++ + + + P+ Y +++ +D+D + Q+ +
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMS-PDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y+ + + I E++ + I A E
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F +K C+P++ TY ++ L G + + F M GV P+ ++YN L+
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L + RR+ + MG +G P+++TY +I + G+ ++++ + N+M Q+
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y ++I G A+ I + M
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCV--LVASAETNDIDLSFQILKDLLVSS 63
I LC +G V+ A L++ + I LP A+ C ++A + + ++++ D+ +
Sbjct: 292 INGLCDSGRVNEAFDLIREMILHGI-LPTAHTCTGPIIALCDMGCYEDAWRLFVDM--KN 348
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + YT A +++ C L+ + + + + N +I ++R+
Sbjct: 349 KGCEPNVYTYTA---LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
I+ A ++ + + C P+++TYN ++ ILG + ++N +M + G + ++
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN---NMLQRGHSANLVT 462
Query: 176 YNTLL-------NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
YNT++ N +R LDL M + G KPD +YT LI F + +E +
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDL-------MRDGGCKPDEWSYTELICGFCKISKMESAF 515
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LFN+M + P+ Y +LID K K+D A ++ E M S
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++++ N +I A K + A I + + PD TY ++ R ++ L F
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P+ ++Y+TL+N L R++ REM GI P T T I +
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G E++ RLF DMK + P++Y Y +LI L G + +A+ +F M+
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L Y+ +L L R+G +++ + M GV P+ + YN ++N L K + +
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
++ ES + PD TYT++I R +++ +L++FN M ++ P+ Y +LI+ L G
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299
Query: 258 KVDLAMTIFEEM 269
+V+ A + EM
Sbjct: 300 RVNEAFDLIREM 311
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 115/300 (38%), Gaps = 43/300 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G+ S A+ + + ++ LPN Y+ ++ A + ++ + + +L
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGC-LPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y A+IM+ F+ +++ ++ +I + ++
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI------KGLKNEY 719
Query: 124 LIFDHIKGLKCKPDLI--------------------------------TYNIVLDILGRV 151
L+ D + L PD++ N ++ L
Sbjct: 720 LLAD--QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTA 777
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GR + SM G+ PD +YN+LL +L ++R +DL + F+ M G + L Y
Sbjct: 778 GRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGY 837
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LI + + +E+ F +M + P V LID L + G DL M M +
Sbjct: 838 KELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMET 897
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 27/292 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + A LL+ ++ ++ PN YN ++ + N+ + ++ K ++
Sbjct: 537 IDGYCKDEKLDTATSLLEHMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + L ++++ +++ + +I A + ++E+A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ PD ITY +++ G+V N M +AG P +Y L+ L
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Query: 184 RKI-----RRLDL-------CLIYFREMGESGIK----------PDL--LTYTALIDSFG 219
+ +RL C ++ + + P L AL+ +
Sbjct: 716 KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLS 775
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G E+ L M Q + P Y SL+ +L ++ VDLAM +F+ M++
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 56/106 (52%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ ++G+ +Y+ LL +L ++ + + M G++P+LL Y A+I++ + GN
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ + + + ++ P + Y S+I + +D A+ +F +M
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ +SG++ L Y+AL+ R G + ++ M + ++P++ +Y ++I+ L K G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 259 VDLAMTIFEEMNSS 272
V A TI +++ S
Sbjct: 231 VADAETIMKKVFES 244
>gi|399107188|gb|AFP20358.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVB AMT+F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRM 185
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVBEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I +N +I +I++AL D + + D ++Y +++ L + G +
Sbjct: 132 ITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRK 191
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++ V PD + Y T+++ L K + L D C +Y EM GI P++ TYT LI F G
Sbjct: 192 LEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLY-SEMIVKGISPNVFTYTTLIHGFCIMG 250
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N++E+ L N+MK + I P +Y + LID L K GK+D AM++FEEM
Sbjct: 251 NLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 118/252 (46%), Gaps = 34/252 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LCKAG A RLL+ L ++ DL++ +
Sbjct: 173 INGLCKAGETKAVARLLRKLEGHSV-------------------------KPDLVMYTTI 207
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ C ++ D C ++ E +V+ SP ++ +I F +++A +
Sbjct: 208 IHCLCKNK-----LLGDACD---LYSEMIVKGISP-NVFTYTTLIHGFCIMGNLKEAFSL 258
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ +K PD+ T+NI++D L + G++++ ++ F MK + P+ ++Y +L++ L K
Sbjct: 259 LNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCK 318
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
L+ + ++M E GI+P++ +YT L+D+ + G +E + + F + + ++
Sbjct: 319 NHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRT 378
Query: 246 YRSLIDNLKKMG 257
Y +I+ L K G
Sbjct: 379 YNVMINGLCKAG 390
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 59/138 (42%)
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ F+ + ++ P +N +L L + R +++ F + G+ PD + + L+N
Sbjct: 45 AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + F + + G P+ +T LI G I+ +L + + Q +
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164
Query: 242 SIYVYRSLIDNLKKMGKV 259
Y +LI+ L K G+
Sbjct: 165 DQVSYGTLINGLCKAGET 182
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P F+ +N +L++L K +R + F++ +GI PDL T + LI+ F +I + +
Sbjct: 60 PTFL-FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F ++ ++ P+ +LI L G++ A+ +++
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKV 157
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +N+ +M+ +GV PD +Y+ L+N L K ++D + F EM + G+ P+ +
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L +NI++ + G + + F ++ + G+ P +S+NTL+N K+ L+
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG++PD+ TY+ LI+ + ++++ LF++M + + P+ + +LID K G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 258 KVDLAMTIFEEM-NSSLS 274
+VDLAM I+++M + SLS
Sbjct: 256 RVDLAMEIYKQMLSQSLS 273
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A ++FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 42/242 (17%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + DK + +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANVLFDEMLDKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D + KGLK PD TY ++D + G + M + + D ++Y L++
Sbjct: 297 DLIDEMIMKGLK--PDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R REM G+KP++ TYT +I+ F + G++ +L +M++ +P
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414
Query: 242 SI 243
S+
Sbjct: 415 SV 416
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ +I K+ +++ A+ I+ + PDLITYN ++ L + G + +
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ PD +Y TL++ K L+ Y + M + I+ D + YTALI + G
Sbjct: 302 MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ ++ +M ++P I Y +I+ K G V + +EM
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G ++ + M +S
Sbjct: 183 KLGDLNEGFRLKNAMQAS 200
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +N+ +M+ +GV PD +Y+ L+N L K ++D + F EM + G+ P+ +
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L +NI++ + G + + F ++ + G+ P +S+NTL+N K+ L+
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG++PD+ TY+ LI+ + ++++ LF++M + + P+ + +LID K G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 258 KVDLAMTIFEEM-NSSLS 274
+VDLAM I+++M + SLS
Sbjct: 256 RVDLAMEIYKQMLSQSLS 273
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A ++FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ +I K+ +++ A+ I+ + PDLITYN ++ L + G + +
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ PD I+Y TL++ K L+ Y + M + I+ D + YTALI + G
Sbjct: 302 MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ ++ +M ++P I Y +I+ K G V + +EM
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 42/242 (17%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + DK + +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANVLFDEMLDKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D + KGLK PD ITY ++D + G + M + + D ++Y L++
Sbjct: 297 DLIDEMIMKGLK--PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R REM G+KP++ TYT +I+ F + G++ +L +M++ P
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Query: 242 SI 243
S+
Sbjct: 415 SV 416
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G ++ + M +S
Sbjct: 183 KLGDLNEGFRLKNAMQAS 200
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++++V++ +I + +A+ + D + C+PDL+TY V++ L
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ L+ M++ + D + YNT+++ L K + +D L F EM GI+PD+
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY++LI G ++ RL +DM +++I P++ + +LID K GK+ A +++EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 105/201 (52%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + + ++ + ++++VQ ++ ++ K I+ AL + ++
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + D++ YN ++D L + ++D LN F M G+ PD +Y++L++ L R
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+++T++ALID+F + G + E+ +L+++M ++ I P I+ Y SLI
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A +FE M S
Sbjct: 371 NGFCMHDRLDEAKHMFELMIS 391
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 130/266 (48%), Gaps = 3/266 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLS--FQILKDLL 60
N I+ LCK ++ A+ L + +K I P+ + + S N S ++L D++
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ AF+ + +E+++ + I + +I F +++
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + C P+++TY+ ++ + RV + + F M + G+V + ++Y TL+
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + R D + F++M G+ P++LTY L+D + G + +++ +F +++ +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
P IY Y +I+ + K GKV+ +F
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELF 526
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 117/236 (49%), Gaps = 4/236 (1%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEE 93
+N +L A A+ N +L + + + + +S D YT F F + L + +
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQM--QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++++ I+ ++ ++ + S++I A+ + D + + KPD T+ ++ L +
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++ + M + G PD ++Y T++N L K +DL L ++M + I+ D++ Y
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ID + +++++L LF +M + IRP ++ Y SLI L G+ A + +M
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 19/277 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQIL-------- 56
+ LCK G++ A+ LL+ + I YN ++ + +D + +
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 57 -KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
D+ S +S C N+ R D ++LL ++++ +++ + +I AF K
Sbjct: 290 RPDVFTYSSLIS--CLCNYGRW----SDASRLL---SDMIERKINPNVVTFSALIDAFVK 340
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ +A ++D + PD+ TY+ +++ R+++ + F M P+ ++
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y+TL+ K +R++ + FREM + G+ + +TYT LI F + + + + +F M
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P+I Y L+D L K GK+ AM +FE + S
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 112/233 (48%), Gaps = 3/233 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C + A + + + K+ F PN Y+ ++ + ++ ++ +++
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT F DC + +++V + +I+ N ++ K+ ++ KA+
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++F++++ +PD+ TYNI+++ + + G+V D F ++ GV P+ I+YNT+++
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ + ++M E G P+ TY LI + R G+ E S L +M+
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 89/168 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ N+++ A AK + E + + + ++ L DL TY+I ++ R +++ L
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
A M + G PD ++ ++LLN +R+ + +M E G KPD T+T LI
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E++ L + M Q+ +P + Y ++++ L K G +DLA+++ ++M
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 99/212 (46%), Gaps = 6/212 (2%)
Query: 66 LSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+S DC Y+ + F + + E+ Q + + +I F ++R
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A ++F + + P+++TYNI+LD L + G++ + F ++ + + PD +YN +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + K +++ F + G+ P+++ Y +I F R G+ EE+ L MK+
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y +LI + G + + + +EM S
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Query: 86 QLLIFIEEVVQ-IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
+L+I + E +Q + + + I F + Q+ AL + + L +PD++T + +
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
L+ R++D + M E G PD ++ TL++ L + + +M + G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+PDL+TY +++ + G+I+ +L L M++ +I + +Y ++ID L K +D A+
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 265 IFEEMNS 271
+F EM++
Sbjct: 280 LFTEMDN 286
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+V+D ++ F M ++ P + +N LL+ + K+ + +L + +M GI DL TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+ F R + +L + M + P I SL++ ++ A+ + ++M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 127/275 (46%), Gaps = 10/275 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQIL 56
+C I LC+ G S A R+L++ ++F AYN ++ +D + +++
Sbjct: 72 LCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVF---AYNTLVAGYCRYGRLDAARRLI 128
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ V + YT R L ++++++ S++ ++ A KS
Sbjct: 129 ASMPVPPDAYT---YTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKS 185
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+A+ + D ++ C P+++TYN++++ + R RV+D + G PD +SY
Sbjct: 186 SGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSY 245
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
T+L L +R + + F EM E+ P+ +T+ L+ F R G +E ++ + + M +
Sbjct: 246 TTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSE 305
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + +I+++ K G+VD A M S
Sbjct: 306 HGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+E +CK+ A+++L +R K PN YN ++ + +D + QIL L SS
Sbjct: 179 LEAVCKSSGFGQAMKVLDEMRAKGC-TPNIVTYNVIINGMCREDRVDDARQILNRL--SS 235
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
D YT + + + E+V+ + + + ++ F + +E+
Sbjct: 236 YGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVER 295
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + D + C + NIV++ + + GRV+D +M G PD ISY T+L
Sbjct: 296 AIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLK 355
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R + EM P+ +T+ I + G I++++ L M +
Sbjct: 356 GLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSV 415
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I Y +L++ G+VD A+ +F +
Sbjct: 416 GIVTYNALVNGFCVQGRVDSALELFNSL 443
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 128/309 (41%), Gaps = 41/309 (13%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN I +CK G V A L ++ P+ +Y VL + + ++L +
Sbjct: 314 LCNIVINSICKQGRVDDAFEFLNNMGSYGCS-PDTISYTTVLKGLCRAGRWEDAKELLNE 372
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + + + F Q ++ IE++ + I+ N ++ F +
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGR 432
Query: 119 IEKALLIFDHIKGLKCKPDLITY-----------------------------------NI 143
++ AL +F+ L C+P+ ITY N+
Sbjct: 433 VDSALELFN---SLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV 489
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
++ + G V + + M E G P+ I++NTLL+ + + + L + G
Sbjct: 490 LVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG 549
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
I D +TY++++D R IEE++++F+ ++ +RP +Y ++ L K + D A+
Sbjct: 550 ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAI 609
Query: 264 TIFEEMNSS 272
F M S+
Sbjct: 610 DFFAHMVSN 618
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 122/304 (40%), Gaps = 41/304 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN--CVLVASAETNDIDLSFQILKDLL 60
N + C+ G + AA RL+ S+ P+AY ++ + + + +L D+L
Sbjct: 109 NTLVAGYCRYGRLDAARRLIASMP----VPPDAYTYTPLIRGLCDRGRVGDALSLLDDML 164
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S YT A + Q + ++E+ +I+ N II + +++
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVD 224
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY---- 176
A I + + +PD ++Y VL L R D+ F M E VP+ +++
Sbjct: 225 DARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLV 284
Query: 177 -------------------------------NTLLNNLRKIRRLDLCLIYFREMGESGIK 205
N ++N++ K R+D + MG G
Sbjct: 285 RFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCS 344
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD ++YT ++ R G E++ L N+M ++ P+ + + I L + G +D A+ +
Sbjct: 345 PDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILL 404
Query: 266 FEEM 269
E+M
Sbjct: 405 IEQM 408
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 118/270 (43%), Gaps = 4/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N +I LC+ G + A+ L++ + + + YN ++ +D + ++ L
Sbjct: 386 NTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPC 445
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T++ YT + + E++Q P +++ N ++ F + +E+
Sbjct: 446 EPNTIT---YTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEE 502
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ + + C P+LIT+N +LD + + L + G+ D I+Y+++++
Sbjct: 503 AIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVD 562
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R++ + F + + G++P + Y ++ + + + ++ F M P
Sbjct: 563 VLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMP 622
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y LI+ L + G + A + E+ S
Sbjct: 623 NESTYVILIEGLAREGLLKEARYVLSELCS 652
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 108/239 (45%), Gaps = 6/239 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + C G V +A+ L SL + PN Y +L +D + ++L +++
Sbjct: 421 NALVNGFCVQGRVDSALELFNSLPCE----PNTITYTTLLTGLCHAERLDAAAELLAEMM 476
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ L+ + F + + ++++++ ++I N ++ + E
Sbjct: 477 QNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSE 536
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL + + D ITY+ ++D+L R R+ + + F ++++ G+ P + YN +L
Sbjct: 537 EALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKIL 596
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L K D + +F M + P+ TY LI+ R G ++E+ + +++ + +
Sbjct: 597 SALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ ++ L R GR +D + + +G D +YNTL+ + RLD
Sbjct: 68 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLD---AA 124
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
R + + PD TYT LI G + ++L L +DM +++ +PS+ Y L++ + K
Sbjct: 125 RRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCK 184
Query: 256 MGKVDLAMTIFEEMNS 271
AM + +EM +
Sbjct: 185 SSGFGQAMKVLDEMRA 200
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 3/196 (1%)
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
R I DD + +E + + ++I + + A + +G
Sbjct: 43 RRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAP 102
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
D+ YN ++ R GR++ ASM V PD +Y L+ L R+ L
Sbjct: 103 VDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSL 159
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+M +P ++TYT L+++ ++ +++++ ++M+ + P+I Y +I+ + +
Sbjct: 160 LDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCR 219
Query: 256 MGKVDLAMTIFEEMNS 271
+VD A I ++S
Sbjct: 220 EDRVDDARQILNRLSS 235
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C+ G V A+ L+Q + + PN +N +L E + + + ++L L+
Sbjct: 488 NVLVSFFCQKGFVEEAIELVQQMMEHGC-TPNLITFNTLLDGITEDCNSEEALELLHGLV 546
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+L + Y++ D + + V + ++ N+I+ A K + +
Sbjct: 547 SKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETD 606
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
+A+ F H+ C P+ TY I+++ L R G + + + + GV+
Sbjct: 607 RAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 130/273 (47%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA V A + + + K + P+ AY+ ++ ++ +D + +++ ++
Sbjct: 205 VDGLCKAHKVERACDVFEEMIRKG-YKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARG 263
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT+ + + I+E+ + + + I+ + ++EKA
Sbjct: 264 PPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAF 323
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + C PD I+Y + ++ L +GR + F +M E G PD +Y +++N
Sbjct: 324 AVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNF 383
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + R M ++ +KP+ YT ++D F ++ +EE+L L+ + + I PS
Sbjct: 384 CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 443
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
Y ++I+ L K+ K+D A+ + EM +L
Sbjct: 444 VTYNTVINALCKLKKMDEALELLREMQRRKEEL 476
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 134/321 (41%), Gaps = 46/321 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ LCK G + AV+ +Q +R + + + Y+ ++ ++ +F +++++ + R
Sbjct: 275 VAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEM--ADR 332
Query: 65 TLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ D YT F A + E +V+ + II F K + A
Sbjct: 333 DCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAA 392
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + KP+ Y +++D + R+ + L + + + G++P ++YNT++N
Sbjct: 393 THVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINA 452
Query: 183 LRKIRRLDLCLIYFREMG-------------------------------------ESGIK 205
L K++++D L REM ++G+
Sbjct: 453 LCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI 512
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD TYT+LI + G + ++ L +M + I P + Y +L+ L + VD A +
Sbjct: 513 PDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDL 571
Query: 266 FEEMNSSLSDLAGPKDFKRKA 286
+EM + + P +F KA
Sbjct: 572 LQEM---MRNGHTPNEFTFKA 589
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 127/271 (46%), Gaps = 10/271 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L + G++S A+ QS +I PN ++N +L A +D ++ +L+++
Sbjct: 100 NSLLLALVRGGHLSDALGFFQS----SISEPNVSSFNILLRGFAARDDFEVVNALLREM- 154
Query: 61 VSSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
SR ++S+ T+ A D + + + V ++ ++ K+ +
Sbjct: 155 -KSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHK 213
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A +F+ + KPD+I Y+ ++D L + GRV++ M G P ++Y +
Sbjct: 214 VERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTS 273
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L K R+ + +EM ++P + TY+ ++ + G +E++ + +M +
Sbjct: 274 IVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRD 333
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y I+ L +G+ + A +FE M
Sbjct: 334 CAPDTISYTMFIEALYSIGRREEAEKVFETM 364
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 110/246 (44%), Gaps = 37/246 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ CK G+++AA +L+ L DK PN Y
Sbjct: 380 IDNFCKEGSMAAATHVLR-LMDKAAVKPNRY----------------------------- 409
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
YT F+ + + L + +++ S + N +I A K +++++AL +
Sbjct: 410 ----IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALEL 465
Query: 126 FDHIKGLK--CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ K +P ++TY++++ LG+VG + A M + GV+PD +Y +L+ L
Sbjct: 466 LREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTL 525
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ + EM ++GI PD TY L+ R+ +++ + L +M + P+
Sbjct: 526 AGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNE 584
Query: 244 YVYRSL 249
+ ++++
Sbjct: 585 FTFKAV 590
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 130/280 (46%), Gaps = 7/280 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ + +A + +LL ++ K + + + YN +L + N + + + K+ LV
Sbjct: 115 VTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQS 174
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + R + +++ ++ N +I K+ ++++
Sbjct: 175 PPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCE 234
Query: 125 IFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F I+ C PD++TY ++ + G++ + N F M +G+ P+ I++N L++
Sbjct: 235 LFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGF 294
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
KI + +R+M D++T+T+LID + R G + L+ +N MK + + P++
Sbjct: 295 GKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTV 354
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM-NSSLSDLAGPKDF 282
Y Y LI+ L K +++ A ++ NSS+ PK F
Sbjct: 355 YTYAVLINALCKENRLNEARDFLGQIKNSSII----PKPF 390
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 14/272 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ G V A + + + LP+ YN ++ + N++ ++ K+ + S
Sbjct: 185 IRGLCRVGGVDRAFEVFKDMESFGC-LPDVVTYNTLINGLCKANEVQRGCELFKE--IQS 241
Query: 64 RTLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
R SDC YT+ F + + EE+++ ++I N +I F K
Sbjct: 242 R---SDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIG 298
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
I +A ++ + C D++T+ ++D R G+VN L + MK V P +Y
Sbjct: 299 NIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYA 358
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N L K RL+ + ++ S I P Y +ID F + GN++E + +M+++
Sbjct: 359 VLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEK 418
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P + LI G++ A+ IF M
Sbjct: 419 RCDPDKVTFTILIIGHCVKGRMFEAINIFNRM 450
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 140 TYNIVLDILGRVGRVNDMLN-EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
TYN+++ L ++G +D++N F M G +PD L+ + + D+ E
Sbjct: 75 TYNLLMRSLCQMGH-HDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE 133
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ ++ + Y L+ + + E++ LF + Q P + + LI L ++G
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGG 193
Query: 259 VDLAMTIFEEMNS 271
VD A +F++M S
Sbjct: 194 VDRAFEVFKDMES 206
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+ +YN L+ +L ++ DL I F MG G PD L+ + + + +L
Sbjct: 73 YSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLA 132
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+++ +++R + +VY +L+ L K +V A+ +F+E
Sbjct: 133 EVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKE 168
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC +G + A+ L + +F PN YN ++ E I +F +L + +
Sbjct: 362 ISGLCVSGILKVAIGLFHRMSRDGVF-PNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y + + + D + ++ + ++Q +++ N II + S AL
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I D ++ CKPD +Y ++ ++ ++ F M + G+ P+ ++Y L++
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +LD M SG +P++ TY LI + N + L M ++ I P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ID L K G LA+ +F +M
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKM 626
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 34/267 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ C +GN ++A+R+L +RD P+ ++
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGC-KPDEWS------------------------- 497
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YT F E+V + + +I + K +++ A
Sbjct: 498 --------YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +H+K C+P++ TYN+++ L + + M E G+ P+ ++Y +++
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K L L F +M E G P+LLTY++LI + G+ G +EE+ LF ++++ + P
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I+ GKV+ A M
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRM 696
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 118/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK GNV+ A +++ + + + P+ Y +++ +D+D + Q+ +
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMS-PDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y+ + + I E++ + I A E
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F +K C+P++ TY ++ L G + + F M GV P+ ++YN L+
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALI 397
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L + RR+ + MG +G P+++TY +I + G+ ++++ + N+M Q+
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y ++I G A+ I + M
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 23/279 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCV--LVASAETNDIDLSFQILKDLLVSS 63
I LC +G V+ A L++ + I LP A+ C ++A + + ++++ D+
Sbjct: 292 INGLCDSGRVNEAFDLIREMILHGI-LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG 350
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT ++ + + + + + N +I ++R+I+ A
Sbjct: 351 CEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410
Query: 124 LIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++ + + C P+++TYN ++ ILG + ++N +M + G + ++YNT++
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN---NMLQRGHSANLVTYNTII 467
Query: 181 -------NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
N +R LDL M + G KPD +YT LI F + +E + LFN+
Sbjct: 468 KGYCDSGNTTSALRILDL-------MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M + P+ Y +LID K K+D A ++ E M S
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++++ N +I A K + A I + + PD TY ++ R ++ L F
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P+ ++Y+TL+N L R++ REM GI P T T I +
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G E++ RLF DMK + P++Y Y +LI L G + +A+ +F M+
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L Y+ +L L R+G +++ + M GV P+ + YN ++N L K + +
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
++ ES + PD TYT++I R +++ +L++FN M ++ P+ Y +LI+ L G
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299
Query: 258 KVDLAMTIFEEM 269
+V+ A + EM
Sbjct: 300 RVNEAFDLIREM 311
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 116/298 (38%), Gaps = 39/298 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G+ S A+ + + ++ LPN Y+ ++ A + ++ + + +L
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGC-LPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESII------------------- 104
Y A+IM+ F+ +++ ++
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725
Query: 105 ------VVNRIIFAFAKSRQ-----IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
VV F + + Q + L D ++ + L++ L GR
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSN---LSTAGRWFE 782
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
N++L SM G+ PD +YN+LL +L ++R +DL + F+ M G + L Y
Sbjct: 783 ANELL---GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LI + + +E+ F +M + P V LID L + G DL M M +
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMET 897
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 27/292 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + A LL+ ++ ++ PN YN ++ + N+ + ++ K ++
Sbjct: 537 IDGYCKDEKLDTATSLLEHMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + L ++++ +++ + +I A + ++E+A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ PD ITY +++ G+V N M +AG P +Y L+ L
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Query: 184 RKI-----RRLDL-------CLIYFREMGESGIK----------PDL--LTYTALIDSFG 219
+ +RL C ++ + + P L AL+ +
Sbjct: 716 KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLS 775
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G E+ L M Q + P Y SL+ +L ++ VDLAM +F+ M++
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 56/106 (52%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ ++G+ +Y+ LL +L ++ + + M G++P+LL Y A+I++ + GN
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ + + + ++ P + Y S+I + +D A+ +F +M
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ +SG++ L Y+AL+ R G + ++ M + ++P++ +Y ++I+ L K G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 259 VDLAMTIFEEMNSS 272
V A TI +++ S
Sbjct: 231 VADAETIMKKVFES 244
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 136/279 (48%), Gaps = 7/279 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + +C++G+ S A+ LL+ + ++N+ Y+ ++ + ID + + K++
Sbjct: 187 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 246
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S Y + R + ++++V ++I N ++ F K ++++
Sbjct: 247 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 306
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A ++ + P++ITYN ++D + R+ N+ML+ K PD +++ +
Sbjct: 307 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK---CSPDIVTFTS 363
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ ++R+D + FR + + G+ + +TY+ L+ F ++G I+ + LF +M
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ P + Y L+D L GK++ A+ IFE++ S DL
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 462
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LC+ G + AA+ L + + K I YN ++ + + +LKD++
Sbjct: 225 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 284
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + F+ + +E++ +II N ++ + ++ +A
Sbjct: 285 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 344
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + KC PD++T+ ++ V RV+D + F ++ + G+V + ++Y+ L+
Sbjct: 345 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 404
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++ L F+EM G+ PD++TY L+D G +E++L +F D+++ ++ I
Sbjct: 405 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 464
Query: 245 VYRSLIDNLKKMGKVDLAMTIF 266
+Y ++I+ + K GKV+ A +F
Sbjct: 465 MYTTIIEGMCKGGKVEDAWNLF 486
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 60 LVSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ SR L S ++ F A T +L F +++ +I +N +I F + +
Sbjct: 69 MIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCK 128
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A + + L +PD T+N ++ L G+V++ + M E G PD ++YN+
Sbjct: 129 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 188
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++N + + L L R+M E +K D+ TY+ +IDS R G I+ ++ LF +M+ +
Sbjct: 189 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 248
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I+ S+ Y SL+ L K GK + + ++M S
Sbjct: 249 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 281
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 93/177 (52%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+V+++ N +I ++ +A+++ D + C+PD++TYN +++ + R G
Sbjct: 138 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 197
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ L+ M+E V D +Y+T++++L + +D + F+EM GIK ++TY
Sbjct: 198 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 257
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L+ + G + L DM ++I P++ + L+D K GK+ A +++EM
Sbjct: 258 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 314
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 129/281 (45%), Gaps = 6/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKAG + LL+ + + I +PN +N +L + + + ++ K+++
Sbjct: 257 NSLVRGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMI 315
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + M + ++ ++ +V+ I+ +I + ++++
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F +I + +TY+I++ + G++ F M GV+PD ++Y LL
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L +L+ L F ++ +S + ++ YT +I+ + G +E++ LF + + ++
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
P++ Y +I L K G + A + +M D P D
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKME---EDGNAPND 533
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 91/182 (50%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + + ++ ++ ++ +V+ ++ N I+ +S AL + ++
Sbjct: 151 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 210
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K D+ TY+ ++D L R G ++ ++ F M+ G+ ++YN+L+ L K + +
Sbjct: 211 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 270
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ ++M I P+++T+ L+D F + G ++E+ L+ +M + I P+I Y +L+
Sbjct: 271 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 330
Query: 251 DN 252
D
Sbjct: 331 DG 332
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 92/200 (46%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + + D + L + ++ + + + II + + I+ A+ +F ++
Sbjct: 186 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 245
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K ++TYN ++ L + G+ ND M +VP+ I++N LL+ K +L
Sbjct: 246 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 305
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++EM GI P+++TY L+D + + E+ + + M + + P I + SLI
Sbjct: 306 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
+ +VD M +F ++
Sbjct: 366 KGYCMVKRVDDGMKVFRNIS 385
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E+V ++ ++ + ++EKAL IF+ ++ K ++ Y +++ +
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 474
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+V D N F S+ GV P+ ++Y +++ L K L I R+M E G P+
Sbjct: 475 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 534
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMK 235
TY LI + R G++ S +L +MK
Sbjct: 535 TYNTLIRAHLRDGDLTASAKLIEEMK 560
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G + A L + + + I PN YN ++ N + + +L DL+V ++ S
Sbjct: 300 KEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKC-SP 356
Query: 69 D--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
D +T+ + + M + + + + + + ++ F +S +I+ A +F
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ PD++TY I+LD L G++ L F ++++ + + Y T++ + K
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+++ F + G+KP+++TYT +I + G++ E+ L M++ P+ Y
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+LI + G + + + EEM S
Sbjct: 537 NTLIRAHLRDGDLTASAKLIEEMKS 561
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC +G + A+ L + +F PN YN ++ E I +F +L + +
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVF-PNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y + + + D + ++ + ++Q +++ N II + S AL
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I D ++ CKPD +Y ++ ++ ++ F M + G+ P+ ++Y L++
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +LD M SG +P++ TY LI + N + L M ++ I P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ID L K G LA+ +F +M
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKM 626
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 34/267 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ C +GN ++A+R+L +RD P+ ++
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGC-KPDEWS------------------------- 497
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YT F E+V + + +I + K +++ A
Sbjct: 498 --------YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +H+K C+P++ TYN+++ L + + M E G+ P+ ++Y +++
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K L L F +M E G P+LLTY++LI + G+ G +EE+ LF ++++ + P
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I+ GKV+ A M
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRM 696
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 118/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK GNV+ A +++ + + + P+ Y +++ +D+D + Q+ +
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMS-PDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y+ + + I E++ + I A E
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F +K C+P++ TY ++ L G + + F M GV P+ ++YN L+
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L + RR+ + MG +G P+++TY +I + G+ ++++ + N+M Q+
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y ++I G A+ I + M
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCV--LVASAETNDIDLSFQILKDLLVSS 63
I LC +G V+ A L++ + I LP A+ C ++A + + ++++ D+ +
Sbjct: 292 INGLCDSGRVNEAFDLIREMILHGI-LPTAHTCTGPIIALCDMGCYEDAWRLFVDM--KN 348
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + YT A +++ C L+ + + + + N +I ++R+
Sbjct: 349 KGCEPNVYTYTA---LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
I+ A ++ + + C P+++TYN ++ ILG + ++N +M + G + ++
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN---NMLQRGHSANLVT 462
Query: 176 YNTLL-------NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
YNT++ N +R LDL M + G KPD +YT LI F + +E +
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDL-------MRDGGCKPDEWSYTELICGFCKISKMESAF 515
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LFN+M + P+ Y +LID K K+D A ++ E M S
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++++ N +I A K + A I + + PD TY ++ R ++ L F
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P+ ++Y+TL+N L R++ REM GI P T T I +
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G E++ RLF DMK + P++Y Y +LI L G + +A+ +F M+
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L Y+ +L L R+G +++ + M GV P+ + YN ++N L K + +
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
++ ES + PD TYT++I R +++ +L++FN M ++ P+ Y +LI+ L G
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299
Query: 258 KVDLAMTIFEEM 269
+V+ A + EM
Sbjct: 300 RVNEAFDLIREM 311
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 116/298 (38%), Gaps = 39/298 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G+ S A+ + + ++ LPN Y+ ++ A + ++ + + +L
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGC-LPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESII------------------- 104
Y A+IM+ F+ +++ ++
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725
Query: 105 ------VVNRIIFAFAKSRQ-----IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
VV F + + Q + L D ++ + L++ L GR
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSN---LSTAGRWFE 782
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
N++L SM G+ PD +YN+LL +L ++R +DL + F+ M G + L Y
Sbjct: 783 ANELL---GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LI + + +E+ F +M + P V LID L + G DL M M +
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMET 897
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 27/292 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + A LL+ ++ ++ PN YN ++ + N+ + ++ K ++
Sbjct: 537 IDGYCKDEKLDTATSLLEHMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + L ++++ +++ + +I A + ++E+A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 655
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ PD ITY +++ G+V N M +AG P +Y L+ L
Sbjct: 656 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Query: 184 RKI-----RRLDL-------CLIYFREMGESGIK----------PDL--LTYTALIDSFG 219
+ +RL C ++ + + P L AL+ +
Sbjct: 716 KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLS 775
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G E+ L M Q + P Y SL+ +L ++ VDLAM +F+ M++
Sbjct: 776 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 56/106 (52%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ ++G+ +Y+ LL +L ++ + + M G++P+LL Y A+I++ + GN
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ + + + ++ P + Y S+I + +D A+ +F +M
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ +SG++ L Y+AL+ R G + ++ M + ++P++ +Y ++I+ L K G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 259 VDLAMTIFEEMNSS 272
V A TI +++ S
Sbjct: 231 VADAETIMKKVFES 244
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 99/180 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+ + +++ NRII A+ ++ +++A+ +F+ ++ +PD +TY ++DI
Sbjct: 382 LLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHA 441
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+E G+ PD +Y+ ++N L K +L F EM E+G P+L+
Sbjct: 442 KAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLV 501
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N E ++L+ DM+ RP Y +++ L G +D A +F EM
Sbjct: 502 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 561
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 82/161 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++RQ + D + CKP ++TYN ++ GR + + + F M+EAG
Sbjct: 366 MIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAG 425
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K LD+ + + M E G+ PD TY+ +++ G+ G + +
Sbjct: 426 YEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGKGGQLAAAY 485
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LF +M + P++ Y +I K + + ++++M
Sbjct: 486 KLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDM 526
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ K Q+ A +F + C P+L+TYNI++ + + +++ + M+ AG
Sbjct: 471 MVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAG 530
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD I+Y+ ++ L LD F EM PD Y L+D +G+ GN++++L
Sbjct: 531 FRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDWAPDEPVYGLLVDLWGKAGNVDKAL 589
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M Q ++P++ SL+ KM + A + + M
Sbjct: 590 GWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNM 630
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 124 LIFDH------IKGLKCKP----DLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVV 170
L+ DH + LK +P D TY ++ ILG+ G + ++L+E M A
Sbjct: 336 LLHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDE---MSRAHCK 392
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P ++YN +++ + L + F EM E+G +PD +TY LID + G ++ ++ L
Sbjct: 393 PTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDL 452
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M++ + P + Y +++ L K G++ A +F EM
Sbjct: 453 YGRMQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEM 491
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 108 RIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDM---LNEFAS 163
R + + + Q K + +H+ L CK D N VL +L +D L F
Sbjct: 296 RSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLL------HDHTVALGFFQW 349
Query: 164 MK-EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K + G D +Y T++ L + R+ + EM + KP ++TY +I ++GR
Sbjct: 350 LKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRAN 409
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E++++F +M++ P Y +LID K G +D+AM ++ M
Sbjct: 410 YLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD Y +++D+ G+ G V+ L + +M + G+ P+ + N+LL+ K+ R I
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIV 626
Query: 196 FREMGESGIKPDLLTYTALI 215
+ M G+ P + TYT L+
Sbjct: 627 LQNMLARGLVPSVQTYTLLL 646
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 136/269 (50%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK V+ A+ L + D+ I PN YNC++ ++ + ++ K+++
Sbjct: 232 NTIIDSLCKDRLVNDAMEFLSEMLDRGI-PPNVFTYNCMVHGFCILGQLNEATRLFKEMV 290
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T ++ + E + + +I N ++ + R +
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMN 350
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + C P + +YNI+++ + R+++ + A M + PD ++Y+TL+
Sbjct: 351 EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + R L F+EM G+ P+L+TY+ L+D F + G+++E+L+L M+++++
Sbjct: 411 QGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLE 470
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+I + LI+ + GK+++A +F ++
Sbjct: 471 PNIVHHTILIEGMFIAGKLEVAKELFSKL 499
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 90/163 (55%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I +I++A+ +F+ + +P++I+YN +++ L + G + ++ F M++
Sbjct: 162 NALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQ 221
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD ++YNT++++L K R ++ + + EM + GI P++ TY ++ F G + E
Sbjct: 222 NGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNE 281
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ RLF +M + + P L+D L K G V A +FE M
Sbjct: 282 ATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%)
Query: 47 NDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
N +D + IL + ++ + + + E+V+ ++I
Sbjct: 137 NHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISY 196
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N II K+ A+ +F ++ CKPD++TYN ++D L + VND + + M +
Sbjct: 197 NTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLD 256
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ P+ +YN +++ + +L+ F+EM + PD +T T L+D + G + E
Sbjct: 257 RGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSE 316
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +F M ++ + P+I Y +L+D ++ A +FE M
Sbjct: 317 ARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIM 359
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N + C G ++ A RL + + +++ +P+ ++ + +S L ++
Sbjct: 267 NCMVHGFCILGQLNEATRLFKEMVGRDV-MPDTVTLTILVDGLCKEGMVSEARLVFETMT 325
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + + T A +M C Q L+ E +++ + N +I F KSR
Sbjct: 326 EKGVEPNISTYNA---LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSR 382
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++++A + + PD +TY+ ++ L + GR + LN F M G++P+ ++Y+
Sbjct: 383 RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYS 442
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL+ K LD L + M E ++P+++ +T LI+ G +E + LF+ +
Sbjct: 443 ILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFAD 502
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
IRP+I Y +I L K G D A +F +M
Sbjct: 503 GIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKM 534
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 95/186 (51%), Gaps = 7/186 (3%)
Query: 84 CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI 143
C Q+ +F ++ +N +I + ++ A+ I + L P T+N
Sbjct: 111 CNQMDLF-------GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNA 163
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+++ L G++ + + F M G P+ ISYNT++N L K + + F++M ++G
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
KPD++TY +IDS + + +++ ++M + I P+++ Y ++ +G+++ A
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEAT 283
Query: 264 TIFEEM 269
+F+EM
Sbjct: 284 RLFKEM 289
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 90/176 (51%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+V++ S+ + + +FAK +Q + + + + ++ + N++++ L R+
Sbjct: 79 MVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNH 138
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V+ ++ M + G+ P ++N L+N L ++ + F EM G +P++++Y
Sbjct: 139 VDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNT 198
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I+ +TGN ++ +F M+Q +P + Y ++ID+L K V+ AM EM
Sbjct: 199 IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEM 254
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G VS A + +++ +K + PN YN ++ ++ + ++ + ++
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGV-EPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + + E+ A + + ++ + + ++AL
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF + P+L+TY+I+LD + G +++ L SM+E + P+ + + L+ +
Sbjct: 424 NIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGM 483
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+L++ F ++ GI+P + TYT +I + G +E+ LF M+ P+
Sbjct: 484 FIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNS 543
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I + A+ + +EM
Sbjct: 544 CSYNVMIQGFLQNQDSSTAIRLIDEM 569
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ AL F + + +P + + L + + + +++ M GV + S N
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L ++ +D + +M + GI P T+ ALI+ G I+E++ LFN+M ++
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y ++I+ L K G +A+ +F++M
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/218 (16%), Positives = 100/218 (45%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
++YN ++ ++ +D + +L ++ + + Y+ + + L +E
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ +++ + ++ F K +++AL + ++ K +P+++ + I+++ + G+
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ F+ + G+ P +Y ++ L K D FR+M + G P+ +Y
Sbjct: 489 LEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 548
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+I F + + ++RL ++M ++ ++ ++ L+D
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 101/183 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E++V+ +++ NR+I ++ ++ + +AL +F+ ++ + C+PD +TY ++DI
Sbjct: 408 LLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHA 467
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+E G+ PD +Y+ ++N L K L F EM + G P+++
Sbjct: 468 KAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIV 527
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY LI + N + +L+L+ DM+ +P Y +++ L G ++ A +F EM
Sbjct: 528 TYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEM 587
Query: 270 NSS 272
+
Sbjct: 588 KQN 590
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 140 TYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
TY ++ ILGR G +N +L + M + G P+ ++YN L+++ + L L F
Sbjct: 388 TYTTMVGILGRAREFGAINKLLEQ---MVKDGCQPNVVTYNRLIHSYGRANYLGEALNVF 444
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
+M E G +PD +TY LID + G ++ ++ ++ M++ + P + Y +I+ L K
Sbjct: 445 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 504
Query: 257 GKVDLAMTIFEEM 269
G + A +F EM
Sbjct: 505 GNLSAAHRLFCEM 517
Score = 71.2 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q P +I+ N +I AK+R + AL ++ ++ KPD +TY+IV+++L
Sbjct: 513 LFCEMVDQGCVP-NIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVL 571
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + F MK+ VPD Y L++ K ++ ++ M +G+ P++
Sbjct: 572 GYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNV 631
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R + ++ L +M + PS+ Y L+
Sbjct: 632 PTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLL 673
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 78/161 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I KS + A +F + C P+++TYNI++ + + L + M+ AG
Sbjct: 497 MINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAG 556
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM ++ PD Y LID +G+ GN+E++
Sbjct: 557 FKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAW 616
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ M + + P++ SL+ ++ ++ A + + M
Sbjct: 617 EWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNM 657
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ L + R +M + G +P+++TY LI S+GR +
Sbjct: 378 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 437
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+L +FN M++ P Y +LID K G +D+AM+++E M
Sbjct: 438 GEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERM 482
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 15/277 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC G + AV L + + PN +Y V+ +T + ++ + K
Sbjct: 167 NALINGLCNEGKIKEAVELFNEMVKRG-HEPNVISYTTVINGLCKTGNTSMAVDVFK--- 222
Query: 61 VSSRTLSSDCYTNFARAFIMTDD-CTQLLI-----FIEEVVQIASPESIIVVNRIIFAFA 114
+ + C N + D C L+ F+ E+V+ P ++ N I+ F
Sbjct: 223 ---KMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFC 279
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
Q+ +A +F + G P+ +T+ I++D L + G V++ F +M E GV PD
Sbjct: 280 NLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIS 339
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN L++ R ++ F M G P +Y LI+ + ++ ++E+ L +M
Sbjct: 340 TYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEM 399
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + P Y +L+ L ++G+ A+ +F+EM S
Sbjct: 400 YHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCS 436
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 133/266 (50%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK V+ A+ L + ++ I PN YN ++ ++ + ++ K+++
Sbjct: 240 IDSLCKDRLVNDAMEFLSEMVERGI-PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ +T ++ + E + + I N ++ + R + +A
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + C P +YNI+++ + R+++ + A M + PD ++Y+TL+ L
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ R L F+EM G P+L+TY L+D F + G+++E+L+L MK++++ P+I
Sbjct: 419 CQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNI 478
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI+ + GK+++A +F ++
Sbjct: 479 VHYTILIEGMFIAGKLEVAKELFSKL 504
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 93/166 (56%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I N +I +I++A+ +F+ + +P++I+Y V++ L + G + ++ F
Sbjct: 164 ITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKK 223
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M++ G P+ ++Y+T++++L K R ++ + + EM E GI P++ TY +++ F G
Sbjct: 224 MEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQ 283
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E+ RLF +M + + P+ + L+D L K G V A +FE M
Sbjct: 284 LNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N + C G ++ A RL + + +++ +PN ++ + +S L ++
Sbjct: 272 NSIVHGFCNLGQLNEATRLFKEMVGRDV-MPNTVTFTILVDGLCKEGMVSEARLVFETMT 330
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + D T A +M C Q L+ E +++ N +I + KSR
Sbjct: 331 EKGVEPDISTYNA---LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSR 387
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++++A + + PD +TY+ ++ L ++GR + LN F M G P+ ++Y
Sbjct: 388 RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYV 447
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL+ K LD L + M E ++P+++ YT LI+ G +E + LF+ +
Sbjct: 448 ILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGD 507
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RP I Y +I L K G D A +F +M
Sbjct: 508 GTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKM 539
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 95/169 (56%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++ +N +I + ++ ++ + + L PD IT+N +++ L G++ + +
Sbjct: 126 HNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVEL 185
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M + G P+ ISY T++N L K + + F++M ++G KP+++TY+ +IDS +
Sbjct: 186 FNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK 245
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +++ ++M ++ I P+++ Y S++ +G+++ A +F+EM
Sbjct: 246 DRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 97/176 (55%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+V+I S++ + + +FAK +Q + + + + + ++ + NI+++ L R+
Sbjct: 84 MVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNH 143
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V+ ++ M + G+ PD I++N L+N L ++ + F EM + G +P++++YT
Sbjct: 144 VDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTT 203
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I+ +TGN ++ +F M+Q +P++ Y ++ID+L K V+ AM EM
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEM 259
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ +V +V +L + I P+A +N ++ I + ++ +++
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIH-PDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT T + + + +++ Q +++ + II + K R + A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ P++ TYN ++ +G++N+ F M V+P+ +++ L++ L
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + F M E G++PD+ TY AL+D + + E+ ++F M ++ P
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y LI+ K ++D A ++ EM
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEM 399
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G VS A + +++ +K + P+ YN ++ ++ + ++ + ++
Sbjct: 310 VDGLCKEGMVSEARLVFETMTEKGV-EPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKG 368
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + + + E+ A + + ++ + + ++AL
Sbjct: 369 CAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEAL 428
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + P+L+TY I+LD + G +++ L SMKE + P+ + Y L+ +
Sbjct: 429 NLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGM 488
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+L++ F ++ G +PD+ TYT +I + G +E+ LF M+ P+
Sbjct: 489 FIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNS 548
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I + A+ + +EM
Sbjct: 549 CSYNVMIQGFLQNQDSSTAIRLIDEM 574
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 79/151 (52%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ AL F + + +P ++ + L + + + +++ M V + S N
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L ++ +D + +M + GI PD +T+ ALI+ G I+E++ LFN+M ++
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y ++I+ L K G +A+ +F++M
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKM 224
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/218 (17%), Positives = 99/218 (45%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
++YN ++ ++ +D + +L ++ + + Y+ + + L +E
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ +++ ++ F K +++AL + +K K +P+++ Y I+++ + G+
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ F+ + G PD +Y ++ L K D FR+M + G P+ +Y
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+I F + + ++RL ++M ++ ++ ++ L+D
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I+ N +I + + ++ AL I ++ + + D+ TYN + L RV R+++
Sbjct: 144 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHI 203
Query: 164 MKEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M E GVVP++++Y TL++ ++ + RRL FREM E G P ++TY +I
Sbjct: 204 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRL------FREMAEKGATPSVVTYNVMIHG 257
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + G+I E+ R +M+++ P +Y Y SL+ GKVD+A+ +FEEM
Sbjct: 258 YAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEM 309
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 14/266 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK+G V A RLL + + L NA YN +L D +IL+ ++ +
Sbjct: 21 VDGLCKSGRVDDARRLLDDMPRHGVSL-NALCYNSLLDCYVRQKDDGRVQEILE--IMEN 77
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ A + C ++E V + +I F K Q+E A
Sbjct: 78 EGI---------EATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAE 128
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ ++G + I +N ++D R G V+D L A+M++ GV D +YNTL L
Sbjct: 129 MLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGL 188
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ RLD M E G+ P+ +TYT LI + G++ E+ RLF +M ++ PS+
Sbjct: 189 CRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSV 248
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I K G + A +EM
Sbjct: 249 VTYNVMIHGYAKKGSIREAERFRKEM 274
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CK G + AA LL ++ + + L +N ++ +D + +I +
Sbjct: 115 INGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGV 174
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
L Y A + + + ++++ + + +I K + +A
Sbjct: 175 ELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARR 234
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F + P ++TYN+++ + G + + M++ G VPD +Y +L++
Sbjct: 235 LFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHC 294
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++D+ L F EM + G +P+++ YTALI + G E + +L++DM + + P
Sbjct: 295 VNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDS 354
Query: 245 VYRSLIDNLKKMGKVDLAMT 264
+Y +L+ +L + D+ ++
Sbjct: 355 LYSALVGSLHTDNRKDVKVS 374
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 104/237 (43%), Gaps = 11/237 (4%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P A + V+ ++ +D + ++L D+ +L++ CY + ++ D + ++
Sbjct: 14 PLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGR----VQ 69
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
E+++I E I A + D G +P+ TY ++++ ++G
Sbjct: 70 EILEIMENEGI-------EATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIG 122
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
++ A M+ GV + I +NT+++ + +D L M + G++ D+ TY
Sbjct: 123 QMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYN 182
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L R ++E+ L + M + + P+ Y +LI K G + A +F EM
Sbjct: 183 TLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 239
>gi|341605727|gb|AEK82966.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605729|gb|AEK82967.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 79 IBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCK G S A+ L +K + N +L E +D +F+I K++L
Sbjct: 466 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 525
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + +F++E+V+ + +I ++E+A+
Sbjct: 526 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 585
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+D K PD+ TY++++D + R + F M V P+ + YN L+
Sbjct: 586 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 645
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ RL + L +M GI P+ TYT+LI +EE+ LF +M+ + + P+++
Sbjct: 646 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 705
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LID K+G++ + EM+S
Sbjct: 706 HYTALIDGYGKLGQMVKVECLLREMHS 732
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 121/270 (44%), Gaps = 5/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC+AG + A R+ + + + + +YN ++ +D +F L +++
Sbjct: 498 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV- 556
Query: 62 SSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
R L D YT + + + F ++ + + + +I K+ +
Sbjct: 557 -KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 615
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+ FD + +P+ + YN ++ R GR++ L MK G+ P+ +Y +L
Sbjct: 616 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 675
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + I R++ + F EM G++P++ YTALID +G+ G + + L +M + +
Sbjct: 676 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 735
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y +I + G V A + EM
Sbjct: 736 HPNKITYTVMIGGYARDGNVTEASRLLNEM 765
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
V + SP+ + + I AF K ++E+A+ +F ++ P+++T+N V+D LG GR
Sbjct: 241 VCKGVSPD-VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 299
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++ M E G+ P I+Y+ L+ L + +R+ +EM + G P+++ Y
Sbjct: 300 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 359
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LIDSF G++ +++ + + M + + + Y +LI K G+ D A + +EM S
Sbjct: 360 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 417
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 99/263 (37%), Gaps = 38/263 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G V AV+L + + + PN +N V+ D +F
Sbjct: 256 INAFCKGGKVEEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAF---------- 304
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+F E++V+ ++I + ++ ++++I A
Sbjct: 305 -------------------------MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 339
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + P++I YN ++D G +N + M G+ +YNTL+
Sbjct: 340 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 399
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + D +EM G + ++T++I + +LR +M + + P
Sbjct: 400 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 459
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
+ +LI L K GK A+ ++
Sbjct: 460 GLLTTLISGLCKHGKHSKALELW 482
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 137/279 (49%), Gaps = 7/279 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + +C++G+ S A+ LL+ + ++N+ Y+ ++ + ID + + K++
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S Y + R + ++++V ++I N ++ F K ++++
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A ++ + P++ITYN ++D + R+ N+ML+ K + PD +++ +
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS---PDIVTFTS 373
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ ++R+D + FR + + G+ + +TY+ L+ F ++G I+ + LF +M
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ P + Y L+D L GK++ A+ IFE++ S DL
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LC+ G + AA+ L + + K I YN ++ + + +LKD++
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + F+ + +E++ +II N ++ + ++ +A
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + KC PD++T+ ++ V RV+D + F ++ + G+V + ++Y+ L+
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++ L F+EM G+ PD++TY L+D G +E++L +F D+++ ++ I
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 245 VYRSLIDNLKKMGKVDLAMTIF 266
+Y ++I+ + K GKV+ A +F
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLF 496
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 60 LVSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ SR L S ++ F A T +L F +++ +I +N +I F + +
Sbjct: 79 MIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCK 138
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A + + L +PD T+N ++ L G+V++ + M E G PD ++YN+
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++N + + L L R+M E +K D+ TY+ +IDS R G I+ ++ LF +M+ +
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I+ S+ Y SL+ L K GK + + ++M S
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 93/177 (52%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+V+++ N +I ++ +A+++ D + C+PD++TYN +++ + R G
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ L+ M+E V D +Y+T++++L + +D + F+EM GIK ++TY
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L+ + G + L DM ++I P++ + L+D K GK+ A +++EM
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 129/281 (45%), Gaps = 6/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKAG + LL+ + + I +PN +N +L + + + ++ K+++
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + M + ++ ++ +V+ I+ +I + ++++
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F +I + +TY+I++ + G++ F M GV+PD ++Y LL
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L +L+ L F ++ +S + ++ YT +I+ + G +E++ LF + + ++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
P++ Y +I L K G + A + +M D P D
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKME---EDGNAPND 543
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 91/182 (50%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + + ++ ++ ++ +V+ ++ N I+ +S AL + ++
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K D+ TY+ ++D L R G ++ ++ F M+ G+ ++YN+L+ L K + +
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ ++M I P+++T+ L+D F + G ++E+ L+ +M + I P+I Y +L+
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 251 DN 252
D
Sbjct: 341 DG 342
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 92/200 (46%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + + D + L + ++ + + + II + + I+ A+ +F ++
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K ++TYN ++ L + G+ ND M +VP+ I++N LL+ K +L
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++EM GI P+++TY L+D + + E+ + + M + + P I + SLI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
+ +VD M +F ++
Sbjct: 376 KGYCMVKRVDDGMKVFRNIS 395
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+V ++ ++ + ++EKAL IF+ ++ K ++ Y +++ + +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G+V D N F S+ GV P+ ++Y +++ L K L I R+M E G P+ TY
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
LI + R G++ S +L +MK + +ID L
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G + A L + + + I PN YN ++ N + + +L DL+V ++ S
Sbjct: 310 KEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKC-SP 366
Query: 69 D--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
D +T+ + + M + + + + + + ++ F +S +I+ A +F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ PD++TY I+LD L G++ L F ++++ + + Y T++ + K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+++ F + G+KP+++TYT +I + G++ E+ L M++ P+ Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+LI + G + + + EEM S
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKS 571
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +N+ +M+ +GV PD +Y+ L+N L K ++D + F EM + G+ P+ +
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L +NI++ + G + + F ++ + G+ P +S+NTL+N K+ L+
Sbjct: 136 LYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG++PD+ TY+ LI+ + ++++ LF++M + + P+ + +LID K G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 258 KVDLAMTIFEEM-NSSLS 274
+VDLAM I+++M + SLS
Sbjct: 256 RVDLAMEIYKQMLSQSLS 273
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A ++FD + KGL P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M ++ IR Y +LI L + G+ A + EM S
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 42/242 (17%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + DK + +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANVLFDEMLDKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D + KGLK PD ITY ++D + G + M + + D ++Y L++
Sbjct: 297 DLIDEMIMKGLK--PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R REM G+KP++ TYT +I+ F + G++ +L +M++ +P
Sbjct: 355 GLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414
Query: 242 SI 243
S+
Sbjct: 415 SV 416
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ +I K+ +++ A+ I+ + PDLITYN ++ L + G + +
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ PD I+Y TL++ K L+ Y + M + I+ D + YTALI + G
Sbjct: 302 MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ ++ +M ++P I Y +I+ K G V + +EM
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 62/138 (44%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ F + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G ++ + M +S
Sbjct: 183 KLGDLNEGFRLKNAMQAS 200
>gi|147827256|emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
Length = 655
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I A S ++ ++ +F K + C+P+++TYN ++ +L GR+ + F
Sbjct: 472 VVAYNTVIRAIGLSEGVDFSIRVFREXKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFD 531
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+E G P+ I+Y+ + K +++ L F M SG++P + TY L+ FGR G
Sbjct: 532 QMREKGYAPNVITYHCFFGCIEKPKQI---LRTFDRMINSGVRPRMDTYVMLMKKFGRWG 588
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ M++Q P Y +LID L + G VDLA EEM
Sbjct: 589 FLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEM 635
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 40/233 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
NG +E+ CK+G AV+L + ++ K I L AYN V+ A + +D S ++ +
Sbjct: 442 NGVVEE-CKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFR---- 496
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
E ++ +++ N II ++ +I +
Sbjct: 497 -------------------------------EXKEVGCEPNVVTYNTIIKLLCENGRIRE 525
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD ++ P++ITY+ G + + +L F M +GV P +Y L+
Sbjct: 526 AYGVFDQMREKGYAPNVITYHC---FFGCIEKPKQILRTFDRMINSGVRPRMDTYVMLMK 582
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ L I +++M E G PD Y ALID+ + G ++ + + +M
Sbjct: 583 KFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEM 635
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND--------MLNEFASMKEAGVV 170
IE L K L D+ YNI+L + G V + + + MK+ G+
Sbjct: 410 IEAEELFLKESKDLVFNDDVKIYNIILRGWFKNGVVEECKSGKPWRAVKLYKEMKKKGIR 469
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
D ++YNT++ + +D + FRE E G +P+++TY +I G I E+ +
Sbjct: 470 LDVVAYNTVIRAIGLSEGVDFSIRVFREXKEVGCEPNVVTYNTIIKLLCENGRIREAYGV 529
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
F+ M+++ P++ Y ++K ++
Sbjct: 530 FDQMREKGYAPNVITYHCFFGCIEKPKQI 558
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+ C+AGN+S A R+ ++ I PN Y +V A + I + + +++
Sbjct: 1289 VHGWCRAGNISEAERVFGEMKMAGI-XPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVG 1347
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ + N R + ++L ++ ++ P I N +I + + +E+A+
Sbjct: 1348 CDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 1407
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + +K C + ++N + + ++G VN FA MK+ P+ ++YN L+
Sbjct: 1408 KILNSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMF 1466
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ-IRPS 242
+ D+ L +EM E+ I+P+ TY LI +F G+ + F +M +++ +RPS
Sbjct: 1467 ADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPS 1526
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ VY ++ L+K G++ + E+M
Sbjct: 1527 LPVYEMVLQQLRKAGQLKKHEELVEKM 1553
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K RQ + A + D +K + + T+ I++ + G + ++ F M++ G PD
Sbjct: 1189 GKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDK 1248
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
I+++ ++++L K RR +F + + +PD++ YT+L+ + R GNI E+ R+F +
Sbjct: 1249 IAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGE 1307
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
MK I P++Y Y +ID L + G++ A +F EM
Sbjct: 1308 MKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEM 1343
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 88/167 (52%), Gaps = 1/167 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V ++ + ++ I +A +F +K P++ TY+IV+D L R G++ + F+
Sbjct: 1282 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFS 1341
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + G P+ I++N L+ K R + L + +M G PD +TY LI+S R
Sbjct: 1342 EMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDD 1401
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N+EE++++ N +K + + + + + K+G V+ A +F +M
Sbjct: 1402 NLEEAVKILNSVK-KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKM 1447
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P Y ++ + + DL++Q++ + + + + +T R ++ + +
Sbjct: 1178 PEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFN 1237
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ I + +I + +K R+ +A FD +K + +PD++ Y ++ R G
Sbjct: 1238 RMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAG 1296
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+++ F MK AG+ P+ +Y+ +++ L + ++ F EM + G P+ +T+
Sbjct: 1297 NISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFN 1356
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI------DNLKKMGKV 259
L+ + G E+ L+++N MK+ P Y LI DNL++ K+
Sbjct: 1357 NLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 1409
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 88/175 (50%), Gaps = 5/175 (2%)
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V+I I+V R + K+ +A+ F+ ++ CKPD I +++V+ L + R
Sbjct: 1209 VEIPVETFTILVRR----YVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRA 1264
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + F S+K+ PD + Y +L++ + + F EM +GI P++ TY+ +
Sbjct: 1265 IEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIV 1323
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ID+ R+G I + +F++M P+ + +L+ K G+ + + ++ +M
Sbjct: 1324 IDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQM 1378
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCK G S A+ L +K + N +L E +D +F+I K++L
Sbjct: 477 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + +F++E+V+ + +I ++E+A+
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+D K PD+ TY++++D + R + F M V P+ + YN L+
Sbjct: 597 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ RL + L +M GI P+ TYT+LI +EE+ LF +M+ + + P+++
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LID K+G++ + EM+S
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHS 743
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 121/270 (44%), Gaps = 5/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC+AG + A R+ + + + + +YN ++ +D +F L +++
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV- 567
Query: 62 SSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
R L D YT + + + F ++ + + + +I K+ +
Sbjct: 568 -KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+ FD + +P+ + YN ++ R GR++ L MK G+ P+ +Y +L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + I R++ + F EM G++P++ YTALID +G+ G + + L +M + +
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y +I + G V A + EM
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
V + SP+ + + I AF K ++E+A+ +F ++ P+++T+N V+D LG GR
Sbjct: 252 VCKGVSPD-VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++ M E G+ P I+Y+ L+ L + +R+ +EM + G P+++ Y
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LIDSF G++ +++ + + M + + + Y +LI K G+ D A + +EM S
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 99/263 (37%), Gaps = 38/263 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G V AV+L + + + PN +N V+ D +F
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAF---------- 315
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+F E++V+ ++I + ++ ++++I A
Sbjct: 316 -------------------------MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + P++I YN ++D G +N + M G+ +YNTL+
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + D +EM G + ++T++I + +LR +M + + P
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
+ +LI L K GK A+ ++
Sbjct: 471 GLLTTLISGLCKHGKHSKALELW 493
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 132/263 (50%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK + A+ L + +K + PN Y+ ++ + ++L D++
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGV-RPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + AF+ + +E+++ + I + +I F ++++A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + C P+++TYN +++ + R+++ + F M + G+V + ++Y TL++
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R D + F++M G+ P+++TY L+D + G +E+++ +F +++ ++ P+I
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
Y Y +I+ + K GKV+ +F
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLF 528
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 138/279 (49%), Gaps = 23/279 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDL-- 59
+ LCK G++ A LL + + N+ + Y+ V+ + + D + + ++
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVI---YSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 60 ------LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
+++ +L S C N+ R D ++LL ++++ +++ N +I AF
Sbjct: 289 KGVRPNVITYSSLIS-CLCNYER----WSDASRLL---SDMIERKINPNVVTFNALIDAF 340
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K ++ +A ++D + PD+ TY+ +++ R+++ + F M P+
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YNTL+N K +R+D + FREM + G+ + +TYT LI F + + + + +F
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M + P+I Y +L+D L K GK++ AM +FE + S
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 105/201 (52%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + + ++ + ++ +VQ +++ ++ K I+ A + + ++
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + +++ Y+ V+D L + +D LN F M+ GV P+ I+Y++L++ L R
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+++T+ ALID+F + G + E+ +L+++M ++ I P I+ Y SLI
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A +FE M S
Sbjct: 373 NGFCMHDRLDEAKHMFELMIS 393
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 116/235 (49%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ + I L+ +L ++ S ++ + + + ++++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V++ I +I + +A+ + D + C+P+L+TY +V++ L + G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ N M+ A + + + Y+T++++L K R D L F EM G++P+++TY++L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I ++ RL +DM +++I P++ + +LID K GK+ A +++EM
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C + A + + + K+ F PN YN ++ + ID ++ +++
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT F DC + +++V +I+ N ++ K+ ++EKA+
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++F++++ K +P + TYNI+++ + + G+V D + F S+ GV PD I YNT+++
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Query: 184 RKIRRLDLCLIYFREMGESGIKPD 207
+ + FR+M E G PD
Sbjct: 551 CRKGLKEEADALFRKMREDGPLPD 574
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 127/268 (47%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC S A RLL + ++ I PN +N ++ A + + + ++ +++
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKIN-PNVVTFNALIDAFVKEGKLVEAEKLYDEMI--K 358
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R++ D Y++ F M D + E ++ +++ N +I F K+++I++
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ +F + + +TY ++ + ++ F M GV P+ ++YNTLL+
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K +L+ ++ F + S ++P + TY +I+ + G +E+ LF + + ++P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +Y ++I + G + A +F +M
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 91/178 (51%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ ++ ++ N +I F + QI AL + + L +P ++T + +L+
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R++D + M E G PD I++ TL++ L + + M + G +P+L+TY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ + G+I+ + L N M+ +I ++ +Y ++ID+L K D A+ +F EM
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 88/171 (51%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI N+++ A AK ++ + + + + ++ L +L TYNI+++ R +++ L
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P ++ ++LLN +R+ + +M E G +PD +T+T LI
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ L + M Q+ +P++ Y +++ L K G +DLA + +M ++
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 6/182 (3%)
Query: 66 LSSDCYTNFA------RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+S DC+ N F + + E+ Q + + +I F ++R
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A ++F + P+++TYN +LD L + G++ + F ++ + + P +YN +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + K +++ F + G+KPD++ Y +I F R G EE+ LF M++
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 240 RP 241
P
Sbjct: 572 LP 573
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+++D + F M ++ +P +N LL+ + K+++ DL + +M GI +L TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI+ F R I +L L M + PSI SL++ ++ A+ + ++M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 76/155 (49%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
S +++ A+ +F + + P + +N +L + ++ + + +++ M+ G+ +
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN L+N + ++ L L +M + G +P ++T ++L++ + I +++ L + M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ RP + +LI L K A+ + + M
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 18/267 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ CKAG + A ++ +R E++D+D F++ +
Sbjct: 572 IDGHCKAGQIEKACQIYARMR---------------GDIESSDMDKYFKLDHNNCEGPNV 616
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
++ Y + + ++ ++ + IV + +I F K +++ A +
Sbjct: 617 IT---YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F + P+L TY+ +D L + R++ +L + M E P+ + Y +++ L K
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
I + D +M E G P+++TYTA+ID FG++G IE+ L LF DM + P+
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
YR LI++ G +D A + +EM +
Sbjct: 794 YRVLINHCCSNGLLDEAYKLLDEMKQT 820
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 19/279 (6%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSSRTL 66
LC A V A L + ++ +N +P+ Y +L+ S + I + + ++L T
Sbjct: 470 LCDASKVEKAFSLFEEMK-RNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTP 528
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ YT A++ E ++ +++ +I K+ QIEKA I+
Sbjct: 529 NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIY 588
Query: 127 DHIKG---------------LKCK-PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++G C+ P++ITY ++D L + RV + +M G
Sbjct: 589 ARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCE 648
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ I Y+ +++ KI +L F +M E G P+L TY++ ID + ++ L++
Sbjct: 649 PNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKV 708
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + P++ +Y ++D L K+GK D A + +M
Sbjct: 709 LSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKM 747
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 132/279 (47%), Gaps = 9/279 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA V A LL ++ PN Y+ V+ + + + ++ + S
Sbjct: 623 VDGLCKANRVKEAHELLDTMLAHGC-EPNQIVYDAVIDGFCKIGKLQDAQEVFTKM--SE 679
Query: 64 RTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R S + YT +F + +L + ++++ + ++++ ++ K + ++
Sbjct: 680 RGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDE 739
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + ++ C P+++TY ++D G+ G++ L F M G P+FI+Y L+N
Sbjct: 740 AYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLIN 799
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ LD EM ++ +L++ +I+ F + S+ L +++ + + P
Sbjct: 800 HCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESVP 857
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPK 280
+YR LIDN K G++++A+ + EE++SS S K
Sbjct: 858 VDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNK 896
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 13/283 (4%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+ G + R+L + + + PN +N ++ A ++ D ++++ K ++
Sbjct: 326 RKGQLGRCKRILSMMITEGCY-PNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGY 384
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI---IVVNRI-IFAFAK----SRQIE 120
Y F + ++ Q I ++V+ A E + +V+N++ + FA+ + + +
Sbjct: 385 LVYNIFIGSVCSNEE--QPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFD 442
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I + G PD TY+ V+ L +V + F MK G+VP +Y L+
Sbjct: 443 QAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILI 502
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++ K + +F EM G P+++TYTALI ++ + + + LF M + +
Sbjct: 503 DSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCK 562
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFK 283
P++ Y +LID K G+++ A I+ M + K FK
Sbjct: 563 PNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFK 605
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 119/264 (45%), Gaps = 22/264 (8%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LC AG A +++ + K F+P+ Y+ V+ + + ++ +F + +++ +
Sbjct: 435 LCGAGKFDQAFKIICEMMGKG-FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVP 493
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S YT +F Q + +E++ +++ +I A+ K++Q+ A +F
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF 553
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ + CKP+++TY ++D + G++ +A M+ D Y L +N
Sbjct: 554 EMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHN---- 609
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+ P+++TY AL+D + ++E+ L + M P+ VY
Sbjct: 610 ---------------NCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVY 654
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMN 270
++ID K+GK+ A +F +M+
Sbjct: 655 DAVIDGFCKIGKLQDAQEVFTKMS 678
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 13/273 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK G + A + + ++ + PN Y+ + + N +DL ++L +L +S
Sbjct: 658 IDGFCKIGKLQDAQEVFTKMSERG-YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENS 716
Query: 64 RTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + YT TD+ +L++ +EE + +P +++ +I F KS +IE
Sbjct: 717 CTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEE--KGCNP-NVVTYTAMIDGFGKSGKIE 773
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ L +F + C P+ ITY ++++ G +++ MK+ +S+ ++
Sbjct: 774 QCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKII 833
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + L+ E+ E+ P Y LID++ + G +E +L L ++
Sbjct: 834 EGFSQEFITSIGLL--DELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSH 891
Query: 241 P--SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y+Y SLI+NL KVD A+ ++ M S
Sbjct: 892 AVSNKYLYASLIENLSHASKVDKALELYASMIS 924
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 123/310 (39%), Gaps = 46/310 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + K C+ G + A+ L L+D + P+ YN ++ + +D ++ + +++L
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFG-YKPSQTTYNALIQVFLRADKLDTAYLVKREML 238
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + FA + C + I+E P+++ NR++ ++ E
Sbjct: 239 SYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFV-PDTVFY-NRMVSGLCEASLFE 296
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ I ++ C P+++TY I+L R G++ + M G P+ +N+L+
Sbjct: 297 EAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLI 356
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS----------------------- 217
+ K R F++M + G +P L Y I S
Sbjct: 357 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEM 416
Query: 218 --------------FGR----TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
F R G +++ ++ +M + P Y +I L KV
Sbjct: 417 LDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKV 476
Query: 260 DLAMTIFEEM 269
+ A ++FEEM
Sbjct: 477 EKAFSLFEEM 486
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R G N L E +K+ G P +YN L+ + +LD + REM D
Sbjct: 188 RNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRY 247
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T + S + G E+ L ++ + P Y ++ L + + AM I M
Sbjct: 248 TLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRM 305
Query: 270 NSS 272
SS
Sbjct: 306 RSS 308
>gi|399107194|gb|AFP20361.1| At1g03560-like protein, partial [Capsella grandiflora]
gi|399107216|gb|AFP20372.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 185
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 13 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 70
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + Y SL
Sbjct: 71 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSL 130
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
ID L K G++D A +FEEM+
Sbjct: 131 IDGLGKAGRIDEAERLFEEMS 151
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I A S ++ ++ +F +K + C+P+++TYN ++ +L GR+ + F
Sbjct: 388 VVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFD 447
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+E G P+ I+Y+ + K +++ L F M SG++P + TY L+ FGR G
Sbjct: 448 QMREKGYAPNVITYHCFFGCIEKPKQI---LRTFDRMINSGVRPRMDTYVMLMKKFGRWG 504
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ M++Q P Y +LID L + G VDLA EEM
Sbjct: 505 FLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEM 551
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLD 146
+F++E + + + + N I+ + K +K ++ + +G+ CK L +Y+I +D
Sbjct: 304 LFLKESKDLVFNDDVKIYNIILRGWFKMGWWKKCREFWEEMDRRGV-CK-SLYSYSIYMD 361
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
I + G+ + + MK+ G+ D ++YNT++ + +D + FREM E G +P
Sbjct: 362 IQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEP 421
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+++TY +I G I E+ +F+ M+++ P++ Y ++K ++
Sbjct: 422 NVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQI 474
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 6/205 (2%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSS 63
Y++ CK+G AV+L + ++ K I L AYN V+ A + +D S ++ +++
Sbjct: 359 YMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVG 418
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + +++ + ++I + K +QI L
Sbjct: 419 CEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQI---L 475
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
FD + +P + TY +++ GR G + + + M+E G PD +YN L++ L
Sbjct: 476 RTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDAL 535
Query: 184 RKIRRLDLCLIYFREMGESGI--KP 206
+ +DL Y EM G+ KP
Sbjct: 536 VQKGMVDLARKYEEEMLAKGLSAKP 560
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I +N +I +I+K L D + + D ++Y +++ L + G +
Sbjct: 129 ITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRK 188
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++ V PD + YNT++N+L K + L D C +Y EM GI PD++TYT LI F G
Sbjct: 189 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY-SEMIVKGISPDVVTYTTLIHGFCIMG 247
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK---VDLAMTIFEEM 269
++E+ L N+MK + I P +Y + LID L K GK VD AM++FEEM
Sbjct: 248 KMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEM 297
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 7/227 (3%)
Query: 48 DIDLSFQILKDLLVSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIV 105
I L+F + ++L R D T + + + L F ++VV +
Sbjct: 108 HITLAFSVFANIL--KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVS 165
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
+I K+ + + + ++G KPD++ YN +++ L + + D + ++ M
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 225
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN-- 223
G+ PD ++Y TL++ + ++ EM I PD+ T++ LID+ G+ G
Sbjct: 226 VKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKK 285
Query: 224 -IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E++ LF +MK + + P I Y SLID L K ++ A+ + +EM
Sbjct: 286 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEM 332
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 6/269 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCKAG A RLL+ L ++ P+ YN ++ + + + + + +++V
Sbjct: 170 INGLCKAGETKAVARLLRKLEGHSV-KPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 228
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS---RQIE 120
+ YT F + + + E+ + + +I A K + ++
Sbjct: 229 ISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVD 288
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F+ +K PD++TYN ++D L + + + MKE G+ PD SY LL
Sbjct: 289 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILL 348
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K RL++ +F+ + G ++ Y +I+ + G E++ L + M+ +
Sbjct: 349 DGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCM 408
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ +R++I L + + D A I EM
Sbjct: 409 PNAITFRTIICALSEKDENDKAEKILREM 437
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 80/171 (46%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
P + N I+ + K+++ + +F + PDL T +I+++ +
Sbjct: 54 PPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAF 113
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ FA++ + G PD I+ NTL+ L + L + ++ G + D ++Y LI+
Sbjct: 114 SVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGL 173
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G + RL ++ ++P + +Y ++I++L K + A ++ EM
Sbjct: 174 CKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 224
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%)
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
++ P +N +L L + R +++ F + G+ PD + + L+N + L
Sbjct: 52 MRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITL 111
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
F + + G PD +T LI G I+++L + + Q + Y +LI+
Sbjct: 112 AFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLIN 171
Query: 252 NLKKMGKV 259
L K G+
Sbjct: 172 GLCKAGET 179
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K+R+ A+ + + +KG CK D+ TY +++D L + G + L+ F+ M AG
Sbjct: 118 LINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAG 176
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
++PD + Y++L++ L + RL L +F+EM GI D+ TY +LI R G +E
Sbjct: 177 ILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVT 236
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
N M + P + + LID L K GKV A I E M+
Sbjct: 237 WFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMH 278
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 24/278 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK---NIFLPNAYNCVLVA----SAETNDIDL-----SF 53
I LCKA A++L + ++ ++F Y ++ + T +D+
Sbjct: 119 INGLCKARKTGLAIKLHEKMKGNCKGDVF---TYGMIIDSLCKDGMTTEALDMFSEMIGA 175
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
IL D++V S + C F R + L F +E+ + N +I
Sbjct: 176 GILPDVVVYSSLMDGLC--RFGR-------LKEALEFFKEMEGRGISADVYTYNSLIHGL 226
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+++ ++ + + PD T+ I++D L + G+V + M G PD
Sbjct: 227 SRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDI 286
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YNTL+N L + +L+ F + + GIK ++ +Y LI+ + + I+E+ RLF +
Sbjct: 287 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEE 346
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M+ + ++PS Y +LI L + G+V A +F EM +
Sbjct: 347 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 384
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 119/252 (47%), Gaps = 7/252 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC G + A +L +SL D+ I L +YN ++ + ID +F++ +++
Sbjct: 290 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRP 349
Query: 62 SSRTLSSDCYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S+ Y A + +L + ++ Q + V ++ K+
Sbjct: 350 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV---LLDGLCKNGH 406
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A+ +F IK + KP++ ++I+LD + R G++ + +F + + G+ PD I+YN
Sbjct: 407 LEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 466
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L L + +M E G PD +T+ +I + + I E+++L +M+ +
Sbjct: 467 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 526
Query: 239 IRPSIYVYRSLI 250
P V L+
Sbjct: 527 FSPDEAVTSMLL 538
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 90/168 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ N ++ Q+E A +F+ + K ++ +YNI+++ + ++++ F
Sbjct: 286 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFE 345
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+ G+ P ++YNTL+ L + R+ F EM G L TY L+D + G
Sbjct: 346 EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 405
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++EE++ LF +K+ + +P+I V+ L+D + + GK++ A F+E++
Sbjct: 406 HLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 453
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N I L +AG L + D+ F P+A+ ++ + + + QIL+ +
Sbjct: 220 NSLIHGLSRAGLWKEVTWFLNLMVDRG-FSPDAFTFTILIDGLCKEGKVGEAQQILELMH 278
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + E + ++ N +I + K ++I+
Sbjct: 279 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 338
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ ++ KP +TYN ++ L + GRV F M+ G +Y LL
Sbjct: 339 EAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 398
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K L+ + F+ + ++ KP++ ++ L+D R G +EE+ + F+++ + +
Sbjct: 399 DGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y LI+ L G + A+ + +M
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQM 487
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G +PD +T T L+ I ++++LF++M ++ + Y LI+ L K K LA
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 263 MTIFEEMNSS 272
+ + E+M +
Sbjct: 132 IKLHEKMKGN 141
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 109/234 (46%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
Y C++ + + + + K++ TL+ + Y+ ++ D E++
Sbjct: 304 YGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMS 363
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + N ++ AF KSRQ+ +A+ + +K C P + TY ++D + G V
Sbjct: 364 EAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVR 423
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ MK AG P+ +YN +++NL ++ ++D EM +G++P+ +YT L+
Sbjct: 424 MAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLM 483
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F G I + + + + +P I Y SL+ K G++ A+ + EEM
Sbjct: 484 QGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEM 537
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
K G + A+ + ++ + I L N Y+ ++ + D +F + +D+ +
Sbjct: 313 KLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWV 372
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y +AF + T+ + + + +I II F K+ + A +
Sbjct: 373 TYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEM 432
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K C+P+ TYN+++ L ++G+++ + M+ AGV P+F SY TL+ I +
Sbjct: 433 KLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEI 492
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L + + E KP +++Y +L+ + + G ++ ++ + +M + + Y++ +L
Sbjct: 493 GLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTL 552
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+D + G + A I ++M
Sbjct: 553 LDGWAQRGDMWEAYGIMQKM 572
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 125/272 (45%), Gaps = 6/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I A N+ AV ++ + + IF PNA ++ ++ + +++ + + + +
Sbjct: 162 NNLIRAYIMAQNLQGAVSCVEEMEIEGIF-PNAATFSAIISGYGSSGNVEAAEKWFQRSV 220
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y++ A+ + + + ++ + ++ + N ++ +A+
Sbjct: 221 SENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEA 280
Query: 121 KALLIFDHIKG---LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ L +F +K P +TY ++++ ++G++ L MK G+ + +Y+
Sbjct: 281 QCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYS 340
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ ++ F +M E+GI+PD +TY L+ +F ++ + +++L MK +
Sbjct: 341 MLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTR 400
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+I Y ++ID K G V +A EM
Sbjct: 401 GCSPTIQTYITIIDGFMKTGDVRMAYKTVSEM 432
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ CK+ ++ A++LL ++ + Y ++ +T D+ ++++ + ++ ++
Sbjct: 378 LKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGC 437
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
++ Y + + I+E+ + ++ FA +I A
Sbjct: 438 RPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFK 497
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + KP +I+Y +L + GR+ + + M AGV + +NTLL+
Sbjct: 498 CLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGW- 556
Query: 185 KIRRLDLCLIY--FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+R D+ Y ++M + G PD+ +YT+ +++ + G+++++ +MKQQ ++P+
Sbjct: 557 -AQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPN 615
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ Y LI + + A+ ++EM ++
Sbjct: 616 LQTYTILIHGWTSVSHPEKALICYDEMKAA 645
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K G+V A + + ++ PNA YN ++ + ID + ++ ++ ++
Sbjct: 413 IDGFMKTGDVRMAYKTVSEMKLAGC-RPNATTYNVIMHNLVQLGQIDRAASVIDEMELAG 471
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + F + ++ V +I II ++ A K+ +++ A+
Sbjct: 472 VQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAI 531
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + + +N +LD + G + + M++ G PD SY + +N
Sbjct: 532 AVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNAC 591
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + EM + ++P+L TYT LI + + E++L +++MK + P
Sbjct: 592 CKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDK 651
Query: 244 YVYRSLIDNL 253
+Y ++ +L
Sbjct: 652 PLYYCIVTSL 661
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++ + + II A+ K+ +E+A + ++ + L YNI++D R LN
Sbjct: 226 HNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNV 285
Query: 161 FASMK---EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
F +K + G+ P ++Y L+N K+ ++ L + +EM GI + TY+ L+D
Sbjct: 286 FHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDG 345
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + G+ + +F DM + I P Y L+ K ++ A+ + M +
Sbjct: 346 YVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKT 399
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 3/209 (1%)
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y N RA+IM + + +EE+ + + II + S +E A F
Sbjct: 157 SVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWF 216
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
++ Y+ ++ + G + A M+E G+ YN L++ +
Sbjct: 217 QRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARC 276
Query: 187 RRLDLCLIYFREMG---ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
CL F ++ ++G+ P +TY LI+ + + G + ++L +MK Q I +
Sbjct: 277 HIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNR 336
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y L+D ++G A ++FE+M+ +
Sbjct: 337 NTYSMLVDGYVQLGDFANAFSVFEDMSEA 365
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
Y +++ G+ G F M+ AG+ +YN L+ + L + EM
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
GI P+ T++A+I +G +GN+E + + F + ++ +Y S+I K G ++
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNME 245
Query: 261 LAMTIFEEM 269
A + +M
Sbjct: 246 RAEALVADM 254
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/171 (14%), Positives = 73/171 (42%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + K A + F+ ++ + YN ++ + ++ M+ G
Sbjct: 129 LIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEG 188
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P+ +++ +++ ++ +F+ ++ Y+++I ++ + GN+E +
Sbjct: 189 IFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAE 248
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
L DM++Q + ++ +Y L+D + + +F ++ + + P
Sbjct: 249 ALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSP 299
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 9/265 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQS--LRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
N I +CK G A+ +LQ LR+ + PN YN ++ A + N+I+ + + +
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECS---PNTVTYNTLISALCKENEIEAATDLAR- 357
Query: 59 LLVSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+LVS L C + + ++ + + EE+ + +I + R
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++++AL++ ++ C + + YN ++D L + R+ D F M+ GV ++YN
Sbjct: 418 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 477
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ L K +R++ +M G+KPD TY +L+ F R G+IE++ + M
Sbjct: 478 TLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASN 537
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLA 262
P I+ Y +LI L + G+VD+A
Sbjct: 538 GCEPDIFTYGTLIGGLCRAGRVDVA 562
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 130/272 (47%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C+ GNV+ A+ ++ + +K F P+ YN ++ + + + + +IL+ ++
Sbjct: 267 NSLVNGFCRIGNVNDALDIVDFMIEKG-FDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + ++ Y A ++ +V + N +I S+ +
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ +F+ +K CKPD TY+I++D L R+ + L M+ +G + + YNTL+
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K RR++ F +M G+ +TY LID + +EE+ +L + M + ++
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLK 505
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y SL+ ++G ++ A I + M S+
Sbjct: 506 PDKFTYNSLLTYFCRVGDIEKAGDIVQTMASN 537
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 9/269 (3%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVS 62
G+IE+ G+++ A+++ + + L N VLV + ++ + + + L VS
Sbjct: 202 GFIEE----GDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFV--LEVS 255
Query: 63 SRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S D + + F + L ++ +++ + N +I K + E
Sbjct: 256 EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFE 315
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ I + +C P+ +TYN ++ L + + + + G++PD ++NTL+
Sbjct: 316 KAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLI 375
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + D+ + F EM G KPD TY+ LIDS ++E+L L +M+
Sbjct: 376 QGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCA 435
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ VY +LID L K +++ A IF++M
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQM 464
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A K+ Q+ A+L+ + + KPD IT+ ++ G +N L M
Sbjct: 162 NVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLG 221
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G + +S L+N K R++ L + E+ E G PD +T+ +L++ F R GN+ +
Sbjct: 222 YGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVND 281
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L + + M ++ P +Y Y SLI + K+G+ + A+ I ++M
Sbjct: 282 ALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM 324
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK + AA L + L K + LP+ +N ++ + + D++ ++ +++
Sbjct: 337 NTLISALCKENEIEAATDLARILVSKGL-LPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK 395
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y+ + + L+ ++E+ + +V N +I KSR+IE
Sbjct: 396 NKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIE 455
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IFD ++ L +TYN ++D L + RV + M G+ PD +YN+LL
Sbjct: 456 DAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++ ++ + M +G +PD+ TY LI R G ++ + +L ++ + I
Sbjct: 516 TYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIV 575
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + Y +I L + M +F EM
Sbjct: 576 LTPHAYNPVIQALFMRKRTKEGMRLFREM 604
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 123/272 (45%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCKA + A+ +L+ + + + P+ + ++ E D++ + ++ K +L
Sbjct: 162 NVLIKALCKAHQLRPAILMLEEMANHGL-KPDEITFTTLMQGFIEEGDLNGALKMKKQML 220
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L++ F + L F+ EV + + N ++ F + +
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL I D + PD+ TYN ++ + ++G + M P+ ++YNTL+
Sbjct: 281 DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 340
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ R + G+ PD+ T+ LI + N + ++ +F +MK + +
Sbjct: 341 SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCK 400
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y LID+L ++ A+ + +EM SS
Sbjct: 401 PDEFTYSILIDSLCYERRLKEALMLLKEMESS 432
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 2/244 (0%)
Query: 21 LLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAF 78
LL+ L ++ F P N YN L A E N + L + ++ L + +A
Sbjct: 109 LLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKAL 168
Query: 79 IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDL 138
++ +EE+ I ++ F + + AL + + G C
Sbjct: 169 CKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTN 228
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
++ ++++ + GRV + L + E G PD +++N+L+N +I ++ L
Sbjct: 229 VSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M E G PD+ TY +LI + G E+++ + M ++ P+ Y +LI L K +
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348
Query: 259 VDLA 262
++ A
Sbjct: 349 IEAA 352
>gi|341605703|gb|AEK82954.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605705|gb|AEK82955.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605709|gb|AEK82957.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605813|gb|AEK83009.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605815|gb|AEK83010.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605817|gb|AEK83011.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605819|gb|AEK83012.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMSE 150
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|255582603|ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528243|gb|EEF30297.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 841
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 5/255 (1%)
Query: 22 LQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD-CYTNFARAFIM 80
L++ DK F+P+ + V+ A ND D + K + + D CY
Sbjct: 169 LETQLDKLQFVPSMTH-VVQALKIINDADGMLSLFKWAKRQTWYVVDDECYALLFDGLNK 227
Query: 81 TDDCTQLLIFIEEVVQIASP---ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
D + +E+VQ +S S+ NR+I AK+ ++E + F ++ CK D
Sbjct: 228 IRDFDGIQSLFDEMVQDSSKGGISSVYAYNRVIQHLAKAEKLELSFCCFKKVQDSGCKID 287
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
TYN ++ G + SM+ A D +Y ++ +L K RLD+ F+
Sbjct: 288 TQTYNALITSFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPSLAKSGRLDVAFKLFQ 347
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM E I+P +++L+DS G++G ++ S++++ +M+ +R S +Y SLI++ K G
Sbjct: 348 EMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGLRSSASMYVSLIESYTKAG 407
Query: 258 KVDLAMTIFEEMNSS 272
K+D A+ +++EM +
Sbjct: 408 KLDTALRLWDEMKKA 422
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 97/166 (58%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I +F KA I++ ++ +C D TY +++ L + GR++ F MKE
Sbjct: 292 NALITSFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKE 351
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P F +++L++++ K RLD + + EM G++ Y +LI+S+ + G ++
Sbjct: 352 RKIRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGLRSSASMYVSLIESYTKAGKLDT 411
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+LRL+++MK+ RP+ +Y +I++ K GK+D+A +IF++M+ +
Sbjct: 412 ALRLWDEMKKAGFRPNYGLYTLIIESHAKSGKLDIATSIFKDMDKA 457
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 112/238 (47%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN V+ A+ ++LSF K + S + + Y +F+ + E +
Sbjct: 255 AYNRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESM 314
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+I + AKS +++ A +F +K K +P ++ ++D +G+ GR+
Sbjct: 315 QAAQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRL 374
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + + M+ G+ Y +L+ + K +LD L + EM ++G +P+ YT +
Sbjct: 375 DTSMKIYMEMQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 434
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+S ++G ++ + +F DM + P+ Y L++ G+VD AM ++ M ++
Sbjct: 435 IESHAKSGKLDIATSIFKDMDKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNA 492
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 124/270 (45%), Gaps = 1/270 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ L KA + + + ++D + YN ++ + +F+I + +
Sbjct: 257 NRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESMQA 316
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ +L + Y + + +E+ + S + + ++ + KS +++
Sbjct: 317 AQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLDT 376
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
++ I+ ++G + Y +++ + G+++ L + MK+AG P++ Y ++
Sbjct: 377 SMKIYMEMQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIE 436
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ K +LD+ F++M ++G P TY+ L++ +G ++ +++L+N M ++P
Sbjct: 437 SHAKSGKLDIATSIFKDMDKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLKP 496
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y +L+ L VD+A I EM +
Sbjct: 497 GLSTYTALLTLLASKKLVDVAAKILLEMKA 526
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 115/263 (43%), Gaps = 2/263 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSR 64
I L K+G + A +L Q ++++ I LV S ++ +D S +I ++
Sbjct: 330 IPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGL 389
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S+ Y + ++ L +E+ + + + II + AKS +++ A
Sbjct: 390 RSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAKSGKLDIATS 449
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF + P TY+ +L++ G+V+ + + SM AG+ P +Y LL L
Sbjct: 450 IFKDMDKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLKPGLSTYTALLTLLA 509
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ +D+ EM G D+ L+ + + G+++ +LR + M IR + +
Sbjct: 510 SKKLVDVAAKILLEMKAMGFSVDVSASDVLM-VYIKDGSVDLALRWLSFMGSSGIRTNNF 568
Query: 245 VYRSLIDNLKKMGKVDLAMTIFE 267
+ R L ++ K G + A + E
Sbjct: 569 IIRQLFESCMKKGLYESAKPLLE 591
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 99/180 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+ + +++ NRII A+ ++ +++A+ +F+ ++ +PD +TY ++DI
Sbjct: 382 LLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHA 441
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+E G+ PD +Y+ ++N L K +L F EM E+G P+L+
Sbjct: 442 KAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLV 501
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N E ++L+ DM+ RP Y +++ L G +D A +F EM
Sbjct: 502 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 561
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 83/161 (51%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++RQ + D + CKP ++TYN ++ GR + + + F M+EAG
Sbjct: 366 MIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAG 425
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K LD+ + + M E G+ PD TY+A+++ G+ G + +
Sbjct: 426 YEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAY 485
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LF +M + P++ Y +I K + + ++++M
Sbjct: 486 KLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDM 526
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP++ + ++ K Q+ A +F + C P+L+TYNI++ + + +++
Sbjct: 462 SPDTF-TYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVV 520
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ M+ AG PD I+Y+ ++ L LD F EM PD Y L+D +
Sbjct: 521 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDWAPDEPVYGLLVDLW 579
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ GN++++L + M Q ++P++ SL+ KM + A + + M
Sbjct: 580 GKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNM 630
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 124 LIFDH------IKGLKCKP----DLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVV 170
L+ DH + LK +P D TY ++ ILG+ G + +L+E M A
Sbjct: 336 LLHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDE---MSRAHCK 392
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P ++YN +++ + L + F EM E+G +PD +TY LID + G ++ ++ L
Sbjct: 393 PTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDL 452
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M++ + P + Y ++++ L K G++ A +F EM
Sbjct: 453 YGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 491
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 108 RIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDM---LNEFAS 163
R + + + Q K + +H+ L CK D N VL +L +D L F
Sbjct: 296 RSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLL------HDHTVALGFFQW 349
Query: 164 MK-EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K + G D +Y T++ L + R+ + EM + KP ++TY +I ++GR
Sbjct: 350 LKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRAN 409
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E++++F +M++ P Y +LID K G +D+AM ++ M
Sbjct: 410 YLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD Y +++D+ G+ G V+ L + +M + G+ P+ + N+LL+ K+ R I
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIV 626
Query: 196 FREMGESGIKPDLLTYTALI 215
+ M G+ P + TYT L+
Sbjct: 627 LQNMLAQGLVPSVQTYTLLL 646
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 90/172 (52%), Gaps = 9/172 (5%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A ++ +I+KA + K PD+ TYN+V+D L + R++ + F +M E
Sbjct: 16 LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE-- 73
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++YNTLL L K R+ F M +GI P +TYT LID F + E +
Sbjct: 74 --PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 131
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPK 280
L M ++ P++Y Y S+I+ L K KVD A +FEEM LAG K
Sbjct: 132 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMK-----LAGCK 178
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
A PE++I+ I + R ++A + + P+++TY LG
Sbjct: 279 ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRA 338
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
EF M E G+ PD ++YN L++ K RLD+ R M +SG+ P+++TY L+
Sbjct: 339 YREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGH 398
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
R G +E L + M + +P + + +L+ L ++G+VD A +
Sbjct: 399 HCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFL 447
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S + +I F K Q E A + + KC P + +Y +++ L + +V+ F
Sbjct: 110 SDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLF 169
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK AG PD ++YNTL++ L +RL M E+ +PD +T+TALI+ T
Sbjct: 170 EEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTT 229
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
I+E+ LF M +Q P + + L+ L K+ A+++
Sbjct: 230 DRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSV 273
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 128/338 (37%), Gaps = 71/338 (21%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ LCKA +S A+ +++ + ++ YN +L + + + + + +
Sbjct: 49 NVVIDTLCKARRISRAIEFFETMPEPDVV---TYNTLLGGLCKNGRVAQACSLFGSMEGA 105
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
T S YT F ++ + ++ II K+R++++A
Sbjct: 106 GITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQA 165
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNE------------------- 160
+F+ +K CKPD +TYN ++ L R+ D+L
Sbjct: 166 YQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEG 225
Query: 161 -------------FASMKEAGVVPDFISYNTLLNNL---RKIRRL-----------DLCL 193
F M + G PD +++ L++ L RK+R + +
Sbjct: 226 LCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVI 285
Query: 194 IY---FREMGES----------------GIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y FRE+G G+ P+++TYTA G + R F M
Sbjct: 286 LYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRM 345
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Q I P + Y L+D K ++D+A + M+ S
Sbjct: 346 LEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQS 383
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/301 (18%), Positives = 114/301 (37%), Gaps = 36/301 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLLVSS 63
I+ CK A LLQ + + P Y+ C ++ + +D ++Q+ +++ ++
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCS-PTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + + +V+ + I +I + +I++A
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236
Query: 124 LIFDHIKGLKCKPDLITYNIVLDIL---------------------------------GR 150
++F + C PDL+T+ +++ L GR
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGR 296
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ M GV P+ ++Y L + FR M E GI+PD++
Sbjct: 297 RRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 356
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y L+D F + ++ + ++ M Q + P+I Y +L+ + + GKV+ + M
Sbjct: 357 YNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 416
Query: 271 S 271
S
Sbjct: 417 S 417
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+I A+ +FD I + P LITY ++ L ++G + L M+E G PD ++YN
Sbjct: 156 KIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYN 215
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T++++L K RR + + +F EM + GI P+++TY++++ F G + E+ LF M +
Sbjct: 216 TVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGR 275
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P+ + L+D L K G + A +FE M
Sbjct: 276 NVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 93/178 (52%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+ ++ S+I II K AL + ++ CKPD++ YN V+D L +
Sbjct: 165 DEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKD 224
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R N+ + F+ M + G+ P+ ++Y+++L+ + +L+ F++M + P+ +T+
Sbjct: 225 RRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTF 284
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T L+D + G I E+ R+F M + + P Y Y +L+D ++D A +F+ M
Sbjct: 285 TILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 128/275 (46%), Gaps = 15/275 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK + A+ + D+ I PN Y+ +L ++ + + K ++
Sbjct: 215 NTVIDSLCKDRRANEAMYFFSEMVDQGI-PPNVVTYSSILHGFCNLGQLNEATSLFKQMI 273
Query: 61 VSSRTLSSDCYTNFARAFIMTDD-CTQLLIF-----IEEVVQIASPESIIVVNRIIFAFA 114
+ ++ +T I+ D C + +I E + + + ++ +
Sbjct: 274 GRNVMPNTVTFT------ILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYC 327
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
Q+++A +FD + G P + YNI+++ + R+N+ + M + + PD +
Sbjct: 328 LQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y+TL+ + R + F+EM G+ PD +TY+ L+D + G+++E+ RL M
Sbjct: 388 TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAM 447
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +I P I +Y LI + GK++ A +F +
Sbjct: 448 QESKIEPHICIYNILIQGMCNFGKLEAARELFSNL 482
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 11/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVASAETNDIDLSFQILKDLLVSSR 64
+ C G ++ A L + + +N+ +PN +LV + L + + +++ +
Sbjct: 253 LHGFCNLGQLNEATSLFKQMIGRNV-MPNTVTFTILVDGLCKEGMILEARRVFEMM-TEN 310
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ D YT A +M C Q + + +V S+ V N +I KSR++
Sbjct: 311 GVEPDAYTYSA---LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A + + PD +TY+ ++ + GR F M G++PD I+Y+ L
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L K LD + M ES I+P + Y LI G +E + LF+++ + I
Sbjct: 428 LDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGI 487
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+PS+ Y +I L K G + A +F +M
Sbjct: 488 QPSVVTYTVMISGLLKEGLSNEACEMFRKM 517
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 117/268 (43%), Gaps = 38/268 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G+ + A++LL+ + +K P+ AYN V+ D L
Sbjct: 183 IKGLCKIGHTTNALQLLKKMEEKGC-KPDVVAYNTVI-----------------DSLCKD 224
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R RA + + F E+V P +++ + I+ F Q+ +A
Sbjct: 225 R-----------RA-------NEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEAT 266
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + G P+ +T+ I++D L + G + + F M E GV PD +Y+ L++
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGY 326
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++D F M G P + Y LI+ ++ + E+ L ++M + + P
Sbjct: 327 CLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDT 386
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +L+ + G+ +A +F+EM S
Sbjct: 387 VTYSTLMQGFCQAGRPQVAQKLFKEMCS 414
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+P+++ + ++ F ++ + + A +F + PD ITY+I+LD L + G +++
Sbjct: 383 TPDTV-TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAF 441
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+M+E+ + P YN L+ + +L+ F + GI+P ++TYT +I
Sbjct: 442 RLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGL 501
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G E+ +F M P+ Y I + G A+ + EEM
Sbjct: 502 LKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEM 552
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P+SI + ++ K +++A + ++ K +P + YNI++ + G++
Sbjct: 419 PDSI-TYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARE 477
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F+++ G+ P ++Y +++ L K + FR+M +G P+ TY I F
Sbjct: 478 LFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFL 537
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
R G+ ++RL +M + ++ L+D
Sbjct: 538 RNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG-RVNDMLNE 160
++ +I A+ ++ Q E +L + +K + +P+LITYN VL+ + G +LN
Sbjct: 116 NVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNL 175
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
FA M+ G+ PD I+YNTLL+ ++ + F+ M ESG+ D +TY +L+D+F
Sbjct: 176 FAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAG 235
Query: 221 T---GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ G +EE LR +M+ + P I Y SLI+ G V A +F++M
Sbjct: 236 SNQLGRVEELLR---EMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQ 285
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN +L A + ++ + + K + S + Y + F ++ ++ + E+
Sbjct: 191 YNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREME 250
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+P I N +I A+A + + A +F ++ C PD+ TY+ +L I G G
Sbjct: 251 DEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFE 310
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ + F+ MK+ P +YN+L+ + + F +M +SG+KPD TY+AL+
Sbjct: 311 QVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALL 370
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
GR G E+ ++ M + PS+ LI + KM
Sbjct: 371 SVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKM 411
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 5/179 (2%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALL-IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++I N ++ A +K + LL +F ++ +PDLITYN +L G V
Sbjct: 151 NLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMV 210
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F +M E+GVV D ++Y +L++ +L REM + G PD+ Y +LI+++
Sbjct: 211 FKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYAD 270
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
GN+ + +F M++ P + Y +L+ G + ++F +M DL+ P
Sbjct: 271 AGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMK----DLSTP 325
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG---RVGRVNDMLN 159
+I N ++ A + +E+A ++F + D +TY ++D ++GRV ++L
Sbjct: 188 LITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLR 247
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
E M++ G PD YN+L+ + F++M G PD+ TY+ L+ +G
Sbjct: 248 E---MEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYG 304
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G E+ LF+DMK P++ Y SLI + G ++ +F +M
Sbjct: 305 NQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDM 354
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
I FA +AL +F +++ + CKP Y I++ I+GR G + F M E
Sbjct: 52 IFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPEN 111
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG-NIEE 226
V + ++ L+N + + + L M + ++P+L+TY ++++ + G + E
Sbjct: 112 DVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEG 171
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L LF M+ + I+P + Y +L+ G V+ A +F+ MN S
Sbjct: 172 LLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNES 217
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 98/236 (41%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ A A+ ++ + + K + + Y+ R + Q+ ++
Sbjct: 260 GYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDM 319
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+++P ++ N +I F + ++++ +F + KPD TY+ +L + GR G
Sbjct: 320 KDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLT 379
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ M P + L+++ K+ L+ + + E+G+ P + Y AL
Sbjct: 380 REAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDAL 439
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I + + G E+ M + + + S+++ K+G D A+ F E+
Sbjct: 440 IQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQ 495
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCK G S A+ L +K + N +L E +D +F+I K++L
Sbjct: 490 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 549
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + +F++E+V+ + +I ++E+A+
Sbjct: 550 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 609
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+D K PD+ TY++++D + R + F M V P+ + YN L+
Sbjct: 610 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 669
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ RL + L +M GI P+ TYT+LI +EE+ LF +M+ + + P+++
Sbjct: 670 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 729
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LID K+G++ + EM+S
Sbjct: 730 HYTALIDGYGKLGQMVKVECLLREMHS 756
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 121/270 (44%), Gaps = 5/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC+AG + A R+ + + + + +YN ++ +D +F L +++
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV- 580
Query: 62 SSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
R L D YT + + + F ++ + + + +I K+ +
Sbjct: 581 -KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+ FD + +P+ + YN ++ R GR++ L MK G+ P+ +Y +L
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + I R++ + F EM G++P++ YTALID +G+ G + + L +M + +
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 759
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y +I + G V A + EM
Sbjct: 760 HPNKITYTVMIGGYARDGNVTEASRLLNEM 789
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
V + SP+ + + I AF K ++E+A+ +F ++ P+++T+N V+D LG GR
Sbjct: 265 VCKGVSPD-VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 323
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++ M E G+ P I+Y+ L+ L + +R+ +EM + G P+++ Y
Sbjct: 324 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 383
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LIDSF G++ +++ + + M + + + Y +LI K G+ D A + +EM S
Sbjct: 384 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 99/263 (37%), Gaps = 38/263 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G V AV+L + + + PN +N V+ D +F
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAF---------- 328
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+F E++V+ ++I + ++ ++++I A
Sbjct: 329 -------------------------MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + P++I YN ++D G +N + M G+ +YNTL+
Sbjct: 364 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + D +EM G + ++T++I + +LR +M + + P
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
+ +LI L K GK A+ ++
Sbjct: 484 GLLTTLISGLCKHGKHSKALELW 506
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 137/279 (49%), Gaps = 7/279 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + +C++G+ S A+ LL+ + ++N+ Y+ ++ + ID + + K++
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S Y + R + ++++V ++I N ++ F K ++++
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A ++ + P++ITYN ++D + R+ N+ML+ K + PD +++ +
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS---PDIVTFTS 373
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ ++R+D + FR + + G+ + +TY+ L+ F ++G I+ + LF +M
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ P + Y L+D L GK++ A+ IFE++ S DL
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LC+ G + AA+ L + + K I YN ++ + + +LKD++
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + F+ + +E++ +II N ++ + ++ +A
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + KC PD++T+ ++ V RV+D + F ++ + G+V + ++Y+ L+
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++ L F+EM G+ PD++TY L+D G +E++L +F D+++ ++ I
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 245 VYRSLIDNLKKMGKVDLAMTIF 266
+Y ++I+ + K GKV+ A +F
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLF 496
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 60 LVSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ SR L S ++ F A T +L F +++ +I +N +I F + +
Sbjct: 79 MIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCK 138
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A + + L +PD T+N ++ L G+V++ + M E G PD ++YN+
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++N + + L L R+M E +K D+ TY+ +IDS R G I+ ++ LF +M+ +
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I+ S+ Y SL+ L K GK + + ++M S
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 93/177 (52%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+V+++ N +I ++ +A+++ D + C+PD++TYN +++ + R G
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ L+ M+E V D +Y+T++++L + +D + F+EM GIK ++TY
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L+ + G + L DM ++I P++ + L+D K GK+ A +++EM
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 129/281 (45%), Gaps = 6/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKAG + LL+ + + I +PN +N +L + + + ++ K+++
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + M + ++ ++ +V+ I+ +I + ++++
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F +I + +TY+I++ + G++ F M GV+PD ++Y LL
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L +L+ L F ++ +S + ++ YT +I+ + G +E++ LF + + ++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
P++ Y +I L K G + A + +M D P D
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKME---EDGNAPND 543
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 91/182 (50%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+ + + ++ ++ ++ +V+ ++ N I+ +S AL + ++
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K D+ TY+ ++D L R G ++ ++ F M+ G+ ++YN+L+ L K + +
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ ++M I P+++T+ L+D F + G ++E+ L+ +M + I P+I Y +L+
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 251 DN 252
D
Sbjct: 341 DG 342
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 92/200 (46%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + + D + L + ++ + + + II + + I+ A+ +F ++
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K ++TYN ++ L + G+ ND M +VP+ I++N LL+ K +L
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++EM GI P+++TY L+D + + E+ + + M + + P I + SLI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
+ +VD M +F ++
Sbjct: 376 KGYCMVKRVDDGMKVFRNIS 395
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E+V ++ ++ + ++EKAL IF+ ++ K ++ Y +++ +
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+V D N F S+ GV P+ ++Y +++ L K L I R+M E G P+
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
TY LI + R G++ S +L +MK + +ID L
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G + A L + + + I PN YN ++ N + + +L DL+V ++ S
Sbjct: 310 KEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKC-SP 366
Query: 69 D--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
D +T+ + + M + + + + + + ++ F +S +I+ A +F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ PD++TY I+LD L G++ L F ++++ + + Y T++ + K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+++ F + G+KP+++TYT +I + G++ E+ L M++ P+ Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+LI + G + + + EEM S
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKS 571
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 132/267 (49%), Gaps = 11/267 (4%)
Query: 8 KLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETN-DIDLSFQILKDLLVSSR 64
+LC + V L Q+ + F+P +YN VL A+ + +I + + K++L S
Sbjct: 146 RLCLIDKALSIVHLSQA----HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQV 201
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA-- 122
+ + Y R F + + L F + + + +++ N +I + K R+I+
Sbjct: 202 SPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFE 261
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
LL +KGL+ P+LI+YN+V++ L R GR+ ++ M + G D ++YNTL+
Sbjct: 262 LLRSMALKGLE--PNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K L+ EM G+ P ++TYT+LI S + GN+ + + M+ + + P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +L+D + G ++ A + +EM
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEM 406
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 123/259 (47%), Gaps = 3/259 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK GN A+ ++ + ++ P+ Y ++ + + +++ + + L +
Sbjct: 314 NTLIKGYCKEGNFHQAL-VMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V + YT F + ++E++ S++ N +I + ++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + + +K PD+++Y+ VL R V++ L M G+ PD I+Y++L+
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ RR F EM G+ PD TYTALI+++ G+++++++L N+M ++ +
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552
Query: 241 PSIYVYRSLIDNLKKMGKV 259
P + Y LI+ L K +
Sbjct: 553 PDVVTYSVLINGLNKQART 571
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 38/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL---- 59
I C AGN+ A+R + K LPN YN ++ + ID F++L+ +
Sbjct: 212 IRGFCLAGNLDVALRFFDRMEKKGC-LPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270
Query: 60 ----LVS---------------------------SRTLSSDCYTNFARAFIMTDDCTQLL 88
L+S +L Y + + + Q L
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+ E+++ S+I +I + K+ + +A D ++ P+ TY ++D
Sbjct: 331 VMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G +N+ M + G P ++YN L+N ++ + +M E G+ PD+
Sbjct: 391 SQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDV 450
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++Y+ ++ F R+ +++E+LR+ M + I+P Y SLI + + A +F+E
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDE 510
Query: 269 M 269
M
Sbjct: 511 M 511
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CKAGN++ A L +R + + PN Y ++ ++ ++ ++++LK+++ +
Sbjct: 352 IHSMCKAGNMNRATEFLDQMRVRGL-CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ S Y + + +E++ + ++ + ++ F +S +++AL
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + KPD ITY+ ++ R + + F M G+ PD +Y L+N
Sbjct: 471 RVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAY 530
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
L + EM E G+ PD++TY+ LI+ + E+ RL + ++ PS
Sbjct: 531 CMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSD 590
Query: 244 YVYRSLIDN 252
Y +LI+N
Sbjct: 591 VTYHTLIEN 599
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 42/306 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDI-DLSFQILKDL 59
N I+ CK + LL+S+ K + PN +YN V+ + ++SF +L ++
Sbjct: 244 NTLIDGYCKLRKIDDGFELLRSMALKGL-EPNLISYNVVINGLCREGRMKEISF-VLTEM 301
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+L Y + + + Q L+ E+++ S+I +I + K+ +
Sbjct: 302 NKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNM 361
Query: 120 EKALLIFDH--IKGLKC----------------------------------KPDLITYNI 143
+A D ++GL C P ++TYN
Sbjct: 362 NRATEFLDQMRVRGL-CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNA 420
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+++ G++ D + MKE G+ PD +SY+T+L+ + +D L R+M G
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG 480
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
IKPD +TY++LI F +E+ LF++M + + P + Y +LI+ G + A+
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAI 540
Query: 264 TIFEEM 269
+ EM
Sbjct: 541 QLHNEM 546
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 127/291 (43%), Gaps = 25/291 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C AG + A+ +L+ +++K + P+ +Y+ VL + D+D + ++ + ++
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDMKEKGL-TPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ + F + +E++++ P +I A+ ++
Sbjct: 478 AKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQ 537
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ + + + PD++TY+++++ L + R + + VP ++Y+TL+
Sbjct: 538 KAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 181 NNLRKIR-RLDLCLI--------------YFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
N I + + LI F M E KPD Y +I R G+I
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIR 657
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
++ L+ +M + +L+ L K GKV+ E+NS ++++
Sbjct: 658 KAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVN-------ELNSVIANV 701
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 4/192 (2%)
Query: 82 DDCTQLLIF--IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
DD L+F ++E + + S V + ++ ++++ I+KAL I + P ++
Sbjct: 112 DDEDASLVFRSLQETYDLCNSTSS-VFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVL 170
Query: 140 TYNIVLDILGRVGR-VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+YN VLD R R ++ N F M ++ V P+ +YN L+ LD+ L +F
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDR 230
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M + G P+++TY LID + + I++ L M + + P++ Y +I+ L + G+
Sbjct: 231 MEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 259 VDLAMTIFEEMN 270
+ + EMN
Sbjct: 291 MKEISFVLTEMN 302
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 38/269 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCKA V A + Q + +K + PN YN ++ + ++D++ +
Sbjct: 229 NTIIDGLCKAQEVDRAEDVFQQMVEKGV-KPNNVTYNTIIDGLCKAQEVDMAEGVF---- 283
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+++V S + N II K++ ++
Sbjct: 284 -------------------------------QKMVDKGVKPSNVTYNTIIDGLCKAQAVD 312
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + KPD +TYN ++D L + ++ F M + GV PD ++Y ++
Sbjct: 313 RAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIII 372
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + +D F++M + G+KP+ TY LI + TG EE ++ +M +
Sbjct: 373 DGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLE 432
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P ++ Y L+D L K GK + A ++F+ M
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSM 461
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 94/171 (54%), Gaps = 1/171 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ ++ N II K++++++A +F + KP+ +TYN ++D L + V+
Sbjct: 222 SPD-VVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M + GV P ++YNT+++ L K + +D F++M + G+KPD +TY +ID
Sbjct: 281 GVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGL 340
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I+++ +F M + ++P Y +ID L K VD A +F++M
Sbjct: 341 CKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM 391
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 138/306 (45%), Gaps = 42/306 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LCKA +V A + Q + DK + N YNC++ T + Q +K++ S+
Sbjct: 372 IDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM--SAH 429
Query: 65 TLSSDCYT--------------NFARAFI-------MTDDCTQLLIFIEE---------- 93
L D +T N AR+ + T I +
Sbjct: 430 DLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEM 489
Query: 94 -------VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
V SP I N +I A+AK I++ + IF +K P+++TY ++D
Sbjct: 490 HDLLNLMVANGISPNHRIF-NTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLID 548
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L ++GRV+D + +F M GV P+ + +N+L+ L + + + F EM GI+P
Sbjct: 549 ALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D++ + ++ + + G + E+ RL + M ++P + Y +LID ++D A+ +
Sbjct: 609 DIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLL 668
Query: 267 EEMNSS 272
+ M S+
Sbjct: 669 DGMVSA 674
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+YN V+ +D ++ + ++ VS ++ Y + + +++
Sbjct: 195 SYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVT---YNTIIDGLCKAQEVDRAEDVFQQM 251
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V+ + + N II K+++++ A +F + KP +TYN ++D L + V
Sbjct: 252 VEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAV 311
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ F M + GV PD ++YNT+++ L K + +D F++M + G+KPD LTYT +
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTII 371
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
ID + +++ + +F M + ++P+ Y LI G+ + + +EM++
Sbjct: 372 IDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSA 428
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F+E + Q P+ I+ N ++ K ++ +A + D + + KPD+I+YN ++D
Sbjct: 597 LFLEMLNQGIRPD-IVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R+++ + M AG+ P+ +SYNTLL+ K R+D FREM G+ P +
Sbjct: 656 CFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY +++ R+G E+ L+ +M + + SI Y ++D K D A IF+
Sbjct: 716 ETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQS 775
Query: 269 MNS 271
+ S
Sbjct: 776 LCS 778
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ LCKA + A + Q + DK + N Y ++ + +D + + + ++
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ Y ++ T +++ I+E+ + ++ K+ + +
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD + KP + Y I+L G+ G +++M + M G+ P+ +NT++
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K +D + F +M + G+ P+++TY LID+ + G +++++ FN M + + P
Sbjct: 514 AYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTP 573
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ V+ SL+ L + K + +F EM
Sbjct: 574 NNVVFNSLVYGLCTVDKWEKVEELFLEM 601
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 13/274 (4%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQI--- 55
M +GY +K G +S LL +L N PN +N V+ A A+ ID I
Sbjct: 476 MLHGYGKK----GALSEMHDLL-NLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+K +S ++ + DD +L F + + + +P ++ V N +++
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDD--AVLQFNQMINEGVTPNNV-VFNSLVYGLCT 587
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ EK +F + +PD++ +N VL L + GRV + SM G+ PD IS
Sbjct: 588 VDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVIS 647
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNTL++ R+D + M +G+KP++++Y L+ + + G I+ + LF +M
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREML 707
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + P + Y ++++ L + G+ A ++ M
Sbjct: 708 RKGVTPGVETYNTILNGLFRSGRFSEARELYVNM 741
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 87/177 (49%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
I+ +V + +I N +I + ++++A+ + D + KP++++YN +L
Sbjct: 632 LIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYC 691
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ GR+++ F M GV P +YNT+LN L + R + M +S +
Sbjct: 692 KAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSIC 751
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
TY+ ++D F + +E+ ++F + ++ I + +ID L K G+ + AM +F
Sbjct: 752 TYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLF 808
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ C A + AV+LL + + PN +YN +L + ID ++ + +++L
Sbjct: 649 NTLIDGHCFASRMDEAVKLLDGMVSAGL-KPNIVSYNTLLHGYCKAGRIDNAYCLFREML 707
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + Y + ++ +++ SI + I+ F K+ +
Sbjct: 708 RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFD 767
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IF + + + D+IT+NI++D L + GR D ++ FA++ G+VP ++Y +
Sbjct: 768 EAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIA 827
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
NL + L+ F M +SG P+ ALI G I +
Sbjct: 828 ENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 88/183 (48%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++ +V +I+ N ++ + K+ +I+ A +F + P + TYN +L+ L
Sbjct: 667 LLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLF 726
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R GR ++ + +M ++ + +Y+ +L+ K D F+ + ++ D++
Sbjct: 727 RSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDII 786
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+ +ID + G E+++ LF + + PS+ YR + +NL + G ++ +F M
Sbjct: 787 TFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVM 846
Query: 270 NSS 272
S
Sbjct: 847 EKS 849
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 48/227 (21%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL------KCKPDLITY 141
L +E++ A P S+ +N+++ ++++ + L + K PD TY
Sbjct: 28 LKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTY 87
Query: 142 NIVLDILGRVGR----------------------VNDMLNEFA--------------SMK 165
+IV+ R+GR VN +L M
Sbjct: 88 SIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMP 147
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLC--LIYFREMGE-SGIKPDLLTYTALIDSFGRTG 222
E G +SYNTLL L RR + L++ G+ S PD+++Y +I+ F G
Sbjct: 148 EVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEG 207
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++ LF +M + P + Y ++ID L K +VD A +F++M
Sbjct: 208 QVDKAYSLFLEMG---VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQM 251
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 124/278 (44%), Gaps = 11/278 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN LCK G V A RL+ S+ + P+ +YN ++ + +D + ++L
Sbjct: 617 LCN-----LCKEGRVMEARRLIDSMVCMGL-KPDVISYNTLIDGHCFASRMDEAVKLLDG 670
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + + Y + E+++ + N I+ +S +
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+A ++ ++ + + TY+I+LD + ++ F S+ + D I++N
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K R + + F + +G+ P ++TY + ++ G++EE LF+ M++
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLA---MTIFEEMNSSL 273
P+ ++ +LI L G++ A ++ +E N SL
Sbjct: 851 TAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSL 888
>gi|341606829|gb|AEK83517.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRI 135
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVB AMT+F+ M
Sbjct: 136 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRM 180
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 38 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 97
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 98 GRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 157
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 158 NALIDALTKHGKVBEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 2 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 108
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID K
Sbjct: 2 YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61
Query: 256 MGKVDLAMTIFEEM 269
G V+ A+ + M
Sbjct: 62 SGSVEDAIRLLHRM 75
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+ C+AGN+S A R+ ++ I PN Y +V A + I + + +++
Sbjct: 222 VHGWCRAGNISEAERVFGEMKMAGI-QPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVG 280
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ + N R + ++L ++ ++ P I N +I + + +E+A+
Sbjct: 281 CDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 340
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + +K C + ++N + + ++G VN FA MK+ P+ ++YN L+
Sbjct: 341 KILNSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMF 399
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ-IRPS 242
+ D+ L +EM E+ I+P+ TY LI +F G+ + F +M +++ +RPS
Sbjct: 400 ADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPS 459
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ VY ++ L+K G++ + E+M
Sbjct: 460 LPVYEMVLQQLRKAGQLKKHEELVEKM 486
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 98/182 (53%), Gaps = 11/182 (6%)
Query: 96 QIASPESI--IVVNRIIFAFAKSRQ---IEKALLIFDHIKGLK---CKPDLITYNIVLDI 147
QI+S +S+ +V R+I R + L F+ L+ P+ Y ++D+
Sbjct: 98 QISSADSVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPE--PYMEMIDL 155
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
G+ G + ++ F M++ G PD I+++ ++++L K RR +F + + +PD
Sbjct: 156 AGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPD 214
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++ YT+L+ + R GNI E+ R+F +MK I+P++Y Y +ID L + G++ A +F
Sbjct: 215 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFS 274
Query: 268 EM 269
EM
Sbjct: 275 EM 276
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V ++ + ++ I +A +F +K +P++ TY+IV+D L R G++ + F+
Sbjct: 215 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFS 274
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + G P+ I++N L+ K R + L + +M G PD +TY LI+S R
Sbjct: 275 EMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDD 334
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N+EE++++ N +K + + + + + K+G V+ A +F +M
Sbjct: 335 NLEEAVKILNSVK-KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKM 380
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT+ + + ++ E+ ++ + +I A +S QI +A +F +
Sbjct: 218 YTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMI 277
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL----------- 179
+ C P+ IT+N ++ + + GR +L + MK G PD I+YN L
Sbjct: 278 DVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLE 337
Query: 180 -----LNNLRKIRRLDL--------CLI----------YFREMGESGIKPDLLTYTALID 216
LN+++K L+ C+ F +M + +P+ +TY L+
Sbjct: 338 EAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMR 397
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F + + L+L +M + +I P+ YR LI +G + A + F+EM
Sbjct: 398 MFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEM 450
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I + +I + +K R+ +A FD +K + +PD++ Y ++ R G +++ F
Sbjct: 182 IAFSVVISSLSKKRRAIEAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGE 240
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK AG+ P+ +Y+ +++ L + ++ F EM + G P+ +T+ L+ + G
Sbjct: 241 MKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGR 300
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLI------DNLKKMGKV 259
E+ L+++N MK+ P Y LI DNL++ K+
Sbjct: 301 TEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 342
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 135/301 (44%), Gaps = 36/301 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
IE C+ NV LL ++ +NI + P Y V+ + D+D ++ I+K+++ S
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT + F+ + ++E+ + I N +I +K++++++A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 125 IFDHIKGLKCKPDLITYNIVLD----------------------ILGRVGRVNDMLNEFA 162
+ KP+ TY + +L ++NE+
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 163 -------------SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
SM + G++ D +Y L+N L K ++D FREM GI PD+
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y LI+ F + GN++++ +F++M ++ + P++ +Y L+ + G+++ A + +EM
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 270 N 270
+
Sbjct: 689 S 689
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 88/165 (53%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ +++ A IF ++G PD+ +Y ++++ ++G + + F M E G+ P+ I
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
YN LL + ++ EM G+ P+ +TY +ID + ++G++ E+ RLF++M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
K + + P +VY +L+D ++ V+ A+TIF + P
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 125/254 (49%), Gaps = 3/254 (1%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A+R+L+ ++++ I P+ YN +++ ++ +D + L +++ + ++ Y F
Sbjct: 471 AMRVLKEMKEQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
+I + +++E+ + + ++ +I + K ++ +A + +
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGIL 589
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
D TY ++++ L + +V+D F M+ G+ PD SY L+N K+ +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EM E G+ P+++ Y L+ F R+G IE++ L ++M + + P+ Y ++ID K
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 256 MGKVDLAMTIFEEM 269
G + A +F+EM
Sbjct: 710 SGDLAEAFRLFDEM 723
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 135/311 (43%), Gaps = 47/311 (15%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND-IDLSFQILKDL 59
+C G I + CK V A +S+ D+ I VL+ ND +D + +I +++
Sbjct: 559 LCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 60 LVSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ ++ D Y F + + +E+V+ ++I+ N ++ F +S
Sbjct: 619 --RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 118 QIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+IEKA + D +KGL P+ +TY ++D + G + + F MK G+VPD
Sbjct: 677 EIEKAKELLDEMSVKGL--HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 176 YNTLLNNLRKIRRLDLCLIYFR---------------------EMGESGI---------- 204
Y TL++ ++ ++ + F + G++ +
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Query: 205 -------KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
KP+ +TY +ID + GN+E + LF+ M+ + P++ Y SL++ KMG
Sbjct: 795 GSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 258 KVDLAMTIFEE 268
+ +F+E
Sbjct: 855 RRAEMFPVFDE 865
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ L K N AA L+ + I + P Y+C + ++ ++ + + ++ S
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 65 TLSSDCYTNFARAFIMTDDCTQ---LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + + + Q LL+ +++ + SP + ++ S ++
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT---YGTVVKGMCSSGDLDG 435
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A I + C+P+++ Y ++ + R D + MKE G+ PD YN+L+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K +R+D + EM E+G+KP+ TY A I + + + +M++ + P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + LI+ K KV A + + M
Sbjct: 556 NKVLCTGLINEYCKKEKVIEACSAYRSM 583
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 23/277 (8%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C++G + A LL + K + PNA Y ++ ++ D+ +F++ ++ +
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLH-PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 67 SSDCYTNFARAFIMTDDCTQL-----LIFIEEVVQIASPESIIVVNRII---FAFAKSRQ 118
S YT + D C +L I I + S N +I F F K+
Sbjct: 731 DSFVYTT------LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 119 IEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ L + D KP+ +TYNI++D L + G + F M+ A ++P I+Y
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+LLN K+ R F E +GI+PD + Y+ +I++F + G ++L L + M +
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 238 Q-----IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ SI R+L+ K+G++++A + E M
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 42/202 (20%)
Query: 113 FAKSRQIEKALLIFDHIKGLK----CK---PDLITYNIVLDILGRVGRVNDMLNEFASMK 165
F ++ A L D LK CK P TY++++D L ++ R+ D + M
Sbjct: 245 FKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLD------------------------LCLI------- 194
GV D +Y+ L++ L K R D +C++
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 195 ----YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M SG+ P Y +LI+ + R N+ + L +MK++ I S Y Y +++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 251 DNLKKMGKVDLAMTIFEEMNSS 272
+ G +D A I +EM +S
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIAS 446
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
IE+A+ +F GL+ P L ++LD L R R++ + + M E VV D +Y+
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226
Query: 179 LL-----------------NNLRKIRRLDLCLIYFREMGES----GIKPDLLTYTALIDS 217
L+ ++ R L + ++ ES G+ P TY LID
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDG 286
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +E++ L +M + + Y LID L K D A + EM S
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 134/273 (49%), Gaps = 11/273 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G++S +L+ ++ K F PN YN ++ +D + +L + +
Sbjct: 261 NVLIDGLCKKGDLSRVTKLVDNMFLKGCF-PNEVTYNTLIHGLCLKGKLDKAVSLL-ERM 318
Query: 61 VSSRTLSSD-CYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
VSS+ + +D Y + D +LLI +EE + + + +I K
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQH---IYSVLISGLFKE 375
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ E+A+ ++ + C+P+++ Y+ V+D L R G+ N+ M +G +P+ +Y
Sbjct: 376 GKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTY 435
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++L+ K + + +REM E+G + Y+ LID G ++E++ +++ M
Sbjct: 436 SSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+P Y S+I L +G +D A+ ++ EM
Sbjct: 496 IGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEM 528
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLL 60
N I+ LCK G V A+ + + + +K LP+ Y C L+ + ID + +L ++
Sbjct: 191 NLVIKALCKLGFVDRAIEVFRGMPEKKC-LPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ S Y D +++ ++ + + + N +I +++
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLD 309
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ + + + KC P+ +TY +++ L + R D SM+E G + Y+ L+
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLI 369
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K + + + +++M E G +P+++ Y+A+ID R G E+ + N M
Sbjct: 370 SGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCL 429
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++Y Y SL+ K G + A+ ++ EM+ +
Sbjct: 430 PNVYTYSSLMKGFFKTGLSEEAIQVWREMDET 461
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V+N II R +E + + + P+ +++N+V+ L ++G V+ + F M
Sbjct: 154 VLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGM 213
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
E +PD +Y TL++ L K R+D ++ EM G P + Y LID + G++
Sbjct: 214 PEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDL 273
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+L ++M + P+ Y +LI L GK+D A+++ E M SS
Sbjct: 274 SRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ G + A +L + LPN Y+ ++ +T + + Q+ +++ +
Sbjct: 404 IDGLCREGKPNEAKEILNGMISSGC-LPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETG 462
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + CY+ + ++ +++ I + + +I ++ AL
Sbjct: 463 CSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAAL 522
Query: 124 LIFDHI---KGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ + + K +PD++TYNI+LD L V R D+LN M + G PD I+ N
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLN---CMLDRGCDPDVITCN 579
Query: 178 TLLNNL 183
T LN L
Sbjct: 580 TFLNTL 585
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 129/263 (49%), Gaps = 3/263 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK+ + A+R+++ + I +P+A Y ++ + ++ + Q+++ + S
Sbjct: 107 LCKSNKMKKAIRVMEMMISCGI-IPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPA 165
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
++ Y + M + + L F++ ++Q + + ++ A K R + +A+ +
Sbjct: 166 NTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLL 225
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D I +P+L++YN++L L + GR+ + + F ++ G P+ +SYN LL +L
Sbjct: 226 DEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYE 285
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R + EM P ++TY LI S G IE++L++ ++M +P+ Y
Sbjct: 286 GRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSY 345
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+I L K GKV+ + ++M
Sbjct: 346 NPIIARLCKEGKVEAVVNCLDQM 368
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 8/276 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK GNV A++L++ + D + N YN ++ +++ S Q L L+
Sbjct: 139 VNHLCKRGNVGYAMQLVEKMEDSG-YPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKG 197
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y++ A + + ++E++ +++ N ++ K +IE+A+
Sbjct: 198 LVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAI 257
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ P++++YNI+L L GR + A M P ++YN L+ +L
Sbjct: 258 RLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSL 317
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+++ L EM KP +Y +I + G +E + + M + P+
Sbjct: 318 AFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNE 377
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM----NSSLSD 275
+ + I L GKV A ++ + + NSS+ D
Sbjct: 378 GTFNA-IAVLCYEGKVQEAFSLIQSLGNKQNSSIHD 412
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 8/265 (3%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + A+RL ++L K F PN +YN +L + + + ++L ++ R+
Sbjct: 247 LCKEGRIEEAIRLFKNLPSKG-FSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSP 305
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + Q L I+E++ + N II K ++E +
Sbjct: 306 SIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCL 365
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM--KEAGVVPDFISYNTLLNNLR 184
D + +C P+ T+N + +L G+V + + S+ K+ + D+ Y +++ L
Sbjct: 366 DQMIFGRCSPNEGTFNAIA-VLCYEGKVQEAFSLIQSLGNKQNSSIHDY--YKGVVSCLC 422
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + EM + G PD TY++LI G + E++ +F +++ RP I
Sbjct: 423 KKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDID 482
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI K + DL++ +FE M
Sbjct: 483 NFNALILGFCKSHRTDLSLEVFEMM 507
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 97/181 (53%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E +V+ ++ ++++ KS +++KA+ + + + PD +Y +++ L +
Sbjct: 85 LEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCK 144
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G V + M+++G + ++YNTL+ L L+ L + + + G+ P+ T
Sbjct: 145 RGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFT 204
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y++L+++ + + E++RL +++ + +P++ Y L+ L K G+++ A+ +F+ +
Sbjct: 205 YSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLP 264
Query: 271 S 271
S
Sbjct: 265 S 265
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 6/198 (3%)
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR----QIEKALLIFDHIKG 131
+F + D T++L + + I+ +S+I + R +I A +HI
Sbjct: 33 HSFSLNKDFTRVLASTQ--ITISPKDSVITLPNWRSGKNDQRNRDMRISDAFFHLEHIVK 90
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
KPD++ +L L + ++ + M G++PD SY L+N+L K +
Sbjct: 91 NGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGY 150
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ +M +SG + +TY L+ GN+ +SL+ + + Q+ + P+ + Y SL++
Sbjct: 151 AMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLE 210
Query: 252 NLKKMGKVDLAMTIFEEM 269
K V+ AM + +E+
Sbjct: 211 AAYKERGVNEAMRLLDEI 228
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 56/139 (40%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ K A L+ + PD TY+ ++ L G + + + F ++E
Sbjct: 417 VVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDH 476
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++N L+ K R DL L F M E G P TYT L++ E +
Sbjct: 477 YRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAA 536
Query: 229 RLFNDMKQQQIRPSIYVYR 247
+ ++ +Q+ V R
Sbjct: 537 EVLRELHLRQVMSQSTVER 555
>gi|399107212|gb|AFP20370.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMALFKRM 185
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMALFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 13 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 70
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 71 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSL 130
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
ID L K G++D A +FEEM+
Sbjct: 131 IDGLGKAGRIDEAERLFEEMS 151
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 132/312 (42%), Gaps = 47/312 (15%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCV----LVASAETNDIDLSFQIL 56
+C G I + CK G V A +S+ ++ I V LV + + ND + F +
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ ++ S Y F + + +E+VQ ++I+ N ++ F +S
Sbjct: 622 RGKGIAPDVFS---YGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRS 678
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+IEKA + D + G P+ +TY ++D + G + + F MK G+VPD Y
Sbjct: 679 GEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVY 738
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGI-------------------------------- 204
TL++ ++ ++ + F E E G
Sbjct: 739 TTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMD 797
Query: 205 -------KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
KP+ +TY +ID + GN+E + LF+ M++ + P++ Y SL++ KMG
Sbjct: 798 GSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMG 857
Query: 258 KVDLAMTIFEEM 269
+ ++F+E+
Sbjct: 858 RRSEMFSVFDEV 869
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 135/283 (47%), Gaps = 11/283 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I L KA + A L + + N F P+A Y + E + + + +K++L
Sbjct: 494 NSLIIGLSKAKKMDEARSFLLEMVE-NGFKPDAFTYGAFISGYIEAGEFASADKYVKEML 552
Query: 61 ----VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ ++ L + + + + + C+ +E+ + + +++N ++ K+
Sbjct: 553 ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLV----KN 608
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ A IF ++G PD+ +Y ++D ++G + + F M +AG+ + I Y
Sbjct: 609 GKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIY 668
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N LL + ++ EM G P+ +TY +ID + ++G++ E+ +LF++MK
Sbjct: 669 NMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKL 728
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
+ + P +VY +L+D ++ V+ A+TIFE + + P
Sbjct: 729 KGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAP 771
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 23/277 (8%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C++G + A LL + K F PNA Y ++ ++ D+ +FQ+ ++ +
Sbjct: 675 FCRSGEIEKAKELLDEMSGKG-FPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVP 733
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIE--EVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S YT +D + + E E +S + +F F K+ L
Sbjct: 734 DSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTE------L 787
Query: 125 IFDHIKGLK-------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
D I L KP+ +TYNI++D L + G + F M++A ++P I+Y
Sbjct: 788 TTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYT 847
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+LLN K+ R F E+ +GI+PD + Y+ +I++F + G ++L L + M +
Sbjct: 848 SLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAK 907
Query: 238 Q-----IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ SI R+L+ K+G++++A + E M
Sbjct: 908 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENM 944
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ L K N AA L+ + + P Y+ + ++ ++ + + ++
Sbjct: 322 IDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGV 381
Query: 65 TLSSDCYTNFARAFIMTDDCT---QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T + Y + F + +LL+ I++ + SP + + S ++
Sbjct: 382 TPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYT---YGTAVKGMCSSGDLDG 438
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A I + C+P+++ Y ++ + R D + M+E G+ PD YN+L+
Sbjct: 439 AYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLII 498
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K +++D + EM E+G KPD TY A I + G + + +M + + P
Sbjct: 499 GLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIP 558
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + LI+ K GKV A + F M
Sbjct: 559 NKVLCTGLINEYCKKGKVIEACSAFRSM 586
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 128/311 (41%), Gaps = 62/311 (19%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNI-FLPNAYNC--VLVASAETNDIDLSFQILKDL 59
+GYIEK G + AV + S +D ++ +P+ C +L A + N +DL + + K +
Sbjct: 160 DGYIEK----GFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGM 215
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + Y ++ C + + + V + + E + + +
Sbjct: 216 VERNVVFDVQSYE-----MLIGAHCRDGNVQLAKDVLLKTEEELGTA---------TLNV 261
Query: 120 EKALLIFDHIKGLKCK---PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++AL + K + CK P +YN+++D L + R+ D + M G+ D ++Y
Sbjct: 262 DEAL---ELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAY 318
Query: 177 NTLLNNLRKIRRLD------------------------LCLI-----------YFREMGE 201
+ L++ L K R D +C++ F M
Sbjct: 319 SILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMIT 378
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G+ P Y +LI+ F R N+ + L ++K++ I S Y Y + + + G +D
Sbjct: 379 FGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDG 438
Query: 262 AMTIFEEMNSS 272
A I +EM +S
Sbjct: 439 AYNIVKEMGAS 449
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGV--VPDFISYNTLLNNLRKIRRLDLCLIY 195
++ + I++D G +++ + F+S K+ + VP N LL+ L K RLDL
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDV 211
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIE---------------------ESLRLFNDM 234
++ M E + D+ +Y LI + R GN++ E+L L M
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSM 271
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + PS Y LID L K +++ A ++ EMNS
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNS 308
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 131/279 (46%), Gaps = 6/279 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+AG ++ A++L + + N P Y ++ A + + + + ++
Sbjct: 271 IHGLCEAGRINEALKLFADMTEDNC-CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + + + E+ + S++ N +I + K I+ A
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I D ++ C P+ TYN ++ L + +V+ + M E + P I+YN+L++
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K+ L+ M E+G+ PD TY+ ID+ + G +EE+ LF+ +K + ++ +
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+Y +LID K+GK+D+A ++ E M L+D P +
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERM---LNDACLPNSY 545
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 12/244 (4%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIE 92
YN +L++ ++ ID + +LL + +S + YT + + + ++
Sbjct: 161 CYNTILMSLSKFLLIDEMKTVYLELL--NNQISPNIYTFNAMVNGYCKIGNVVEAELYAS 218
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++VQ +I +++ ++ A +F + C+ + ++Y ++ L G
Sbjct: 219 KIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAG 278
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNL----RKIRRLDLCLIYFREMGESGIKPDL 208
R+N+ L FA M E P +Y L+ L RK+ L+L F EM E G +P++
Sbjct: 279 RINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL----FNEMKEKGCEPNV 334
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TYT LID + ++E+ ++ ++M ++ + PS+ Y +LID K G +D A I +
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDL 394
Query: 269 MNSS 272
M S+
Sbjct: 395 MESN 398
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++ +I +AL +F + C P + TY +++ L GR + LN F MKE G
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ +Y L++ L K ++D EM E G+ P ++TY ALID + + G I+++
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M+ P+ Y LI L K KV AM + +M
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM 430
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK + A ++L + +K + +P+ YN ++ + ID +F+IL + +S
Sbjct: 341 IDGLCKENKMDEARKMLSEMSEKGL-IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + + + ++++ S+I N +I K +E A
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD TY++ +D L + GRV + F S+K GV + + Y L++
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K+ ++D+ M P+ TY LI+ + ++E+ L M ++P++
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI + K G D A+ +F M S
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVS 607
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 7/259 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK V A+ LL + ++ + P+ YN ++ + ND++ ++++L L
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLS-PSLITYNSLIHGQCKVNDLESAYRLLS--L 464
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ L D Y+ F + + V + ++ +I + K +
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ A + + + C P+ TYN++++ L + ++ + + A M GV P ++Y
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + K D L F M G +PD+ TYTA + ++ G +EE + M ++
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644
Query: 239 IRPSIYVYRSLIDNLKKMG 257
I P + Y LID ++G
Sbjct: 645 ILPDLVTYTVLIDGYARLG 663
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 118/284 (41%), Gaps = 19/284 (6%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSS 63
+I+ LCK G V A L S++ K + Y ++ + ID+++ +L+ +L +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+S Y + + +++ + +++ +I K + AL
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+H+ L +PD+ TY L G + ++ + A M E G++PD ++Y L++
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTAL------------------IDSFGRTGNIE 225
++ + + M ++G KP L + L IDS T E
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYE 719
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L+LF M + + +Y +LI + +++ A + M
Sbjct: 720 IALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 763
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 88/183 (48%), Gaps = 7/183 (3%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L+ + E ++I+ +S + ++F R++ K KP L YN +L
Sbjct: 116 LLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNAD-------GEFKFKPTLRCYNTILMS 168
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + +++M + + + P+ ++N ++N KI + +Y ++ ++G+ PD
Sbjct: 169 LSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPD 228
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
TYT+LI R ++ + +F M Q+ + + Y +LI L + G+++ A+ +F
Sbjct: 229 TFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFA 288
Query: 268 EMN 270
+M
Sbjct: 289 DMT 291
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 109/291 (37%), Gaps = 33/291 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-ETNDIDLSFQILKDLLV 61
N IE LCK + A L+ + + +L+ + D + ++ ++
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI----IVVNRIIFAFAKSR 117
YT F A+ +L +++V+ + E I + +I +A+
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQG----MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663
Query: 118 QIEKALLIFDHIKGL---KCKPDLITYNIVLDILGRVGRVNDMLNE-------------- 160
+A FD +K + CKP L +I++ L R+ + +E
Sbjct: 664 LTHRA---FDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEI 720
Query: 161 ----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
F M E G D Y L+ + RL+ M E G+ P Y +L+D
Sbjct: 721 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 780
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ G E++RL + M + + P + Y+ L+ L G + A +F
Sbjct: 781 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFH 831
>gi|224099199|ref|XP_002311400.1| predicted protein [Populus trichocarpa]
gi|222851220|gb|EEE88767.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 121/227 (53%), Gaps = 12/227 (5%)
Query: 54 QILKDLLVS---SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
Q++KD LVS S + DC F +A +M +++F + SP +++ N +I
Sbjct: 289 QMVKDRLVSDVFSYNMLIDC---FCKANVMN---KAVMVFKVMQDRGVSP-NLVTFNTLI 341
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K ++ KA + + L KPD+ T++ ++D L R + +D L F+ M E G+
Sbjct: 342 SGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGIS 401
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ ++YN L+ +L I + + ++M + GI PD+ ++ ALI SF R G +E++ ++
Sbjct: 402 PNAVTYNILIRSLCLIGDVGRSMKLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKM 461
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF--EEMNSSLSD 275
F M + P+ Y Y +L+ L ++G+ D A +F E+N + D
Sbjct: 462 FVSMSTLGLIPNNYTYGALVKALFELGRCDEAKKMFFSMEVNGCVPD 508
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 126/256 (49%), Gaps = 3/256 (1%)
Query: 18 AVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A LL+ L ++ +LP++ +N + + D++ + IL + L Y
Sbjct: 213 AGALLRKLGERG-YLPDSSTFNITMTCLLKGLDVNETCGILDKFIARGAKLGFSFYLALI 271
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
+ ++ ++V+ + N +I F K+ + KA+++F ++
Sbjct: 272 ETLYKAGRGMEGDRYLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKAVMVFKVMQDRGVS 331
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+L+T+N ++ + G V+ + E G+ PD +++++++ L + ++ D L
Sbjct: 332 PNLVTFNTLISGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQFDDALGC 391
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EM E GI P+ +TY LI S G++ S++L DM++ I P I+ + +LI + +
Sbjct: 392 FSEMVEWGISPNAVTYNILIRSLCLIGDVGRSMKLLKDMRKDGISPDIFSFNALIQSFCR 451
Query: 256 MGKVDLAMTIFEEMNS 271
MGKV+ A +F M++
Sbjct: 452 MGKVEKAEKMFVSMST 467
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G + DL+ +++ GR+G F + G+ P YN +++ L K LD
Sbjct: 14 GFRVDEDLLC--VLIGSWGRLGLAKYCEEIFGQISFLGITPSTRLYNAVIDALVKSNSLD 71
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L + F++M KPD TY LI + G ++E+LRL M+ ++Y Y +LI
Sbjct: 72 LAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDEALRLVKQMEGFGYSANVYTYTNLI 131
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+VD A +FE M
Sbjct: 132 YGFCNAKRVDEAFRVFETM 150
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I + II +++Q + AL F + P+ +TYNI++ L +G V +
Sbjct: 369 IFTFSSIIDCLCRAQQFDDALGCFSEMVEWGISPNAVTYNILIRSLCLIGDVGRSMKLLK 428
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M++ G+ PD S+N L+ + ++ +++ F M G+ P+ TY AL+ + G
Sbjct: 429 DMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGLIPNNYTYGALVKALFELG 488
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+E+ ++F M+ P + + +NL K G
Sbjct: 489 RCDEAKKMFFSMEVNGCVPDSFTCNLISENLFKQG 523
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
IF I L P YN V+D L + ++ +F M PD +YN L++ +
Sbjct: 41 IFGQISFLGITPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVC 100
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
KI +D L ++M G ++ TYT LI F ++E+ R+F MK + + P+
Sbjct: 101 KIGVVDEALRLVKQMEGFGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEA 160
Query: 245 VYRSLIDNL 253
RSL+ +
Sbjct: 161 TIRSLVHGV 169
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A KS ++ A L F + CKPD TYN+++ + ++G V++ L M+
Sbjct: 58 NAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDEALRLVKQMEG 117
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G + +Y L+ +R+D F M + P+ T +L+ R E
Sbjct: 118 FGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRSLVHGVFRCVAPRE 177
Query: 227 SLRLFNDMKQQQ 238
+ L D +++
Sbjct: 178 AFELVIDFIEKE 189
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 17/233 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CKA ++ AV + + ++D+ + PN +N ++ + ++ + ++L+ LL
Sbjct: 303 NMLIDCFCKANVMNKAVMVFKVMQDRGV-SPNLVTFNTLISGHCKDGEVHKARELLQMLL 361
Query: 61 VSSR-----TLSS--DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
T SS DC A+ F DD L F E V SP ++ N +I +
Sbjct: 362 ELGLKPDIFTFSSIIDCLCR-AQQF---DD--ALGCFSEMVEWGISPNAV-TYNILIRSL 414
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ +++ + ++ PD+ ++N ++ R+G+V F SM G++P+
Sbjct: 415 CLIGDVGRSMKLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGLIPNN 474
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+Y L+ L ++ R D F M +G PD T + ++ + G+ EE
Sbjct: 475 YTYGALVKALFELGRCDEAKKMFFSMEVNGCVPDSFTCNLISENLFKQGDFEE 527
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/270 (18%), Positives = 106/270 (39%), Gaps = 35/270 (12%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN V+ A ++N +DL++ + + + Y + L ++++
Sbjct: 57 YNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDEALRLVKQME 116
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT--------------- 140
++ +I+ F ++++++A +F+ +K P+ T
Sbjct: 117 GFGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRSLVHGVFRCVAPR 176
Query: 141 --YNIVLD------ILGRVG--RVNDMLNEFASMKEAGV----------VPDFISYNTLL 180
+ +V+D +LGR+ + L+E +EAG +PD ++N +
Sbjct: 177 EAFELVIDFIEKEPVLGRLACDTLLCCLSEKCMPREAGALLRKLGERGYLPDSSTFNITM 236
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K ++ + G K Y ALI++ + G E R N M + ++
Sbjct: 237 TCLLKGLDVNETCGILDKFIARGAKLGFSFYLALIETLYKAGRGMEGDRYLNQMVKDRLV 296
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ Y LID K ++ A+ +F+ M
Sbjct: 297 SDVFSYNMLIDCFCKANVMNKAVMVFKVMQ 326
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 51/114 (44%)
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ E ++ +G D L+ + ++ C F ++ GI P Y A+ID+
Sbjct: 4 ITEIPDIRNSGFRVDEDLLCVLIGSWGRLGLAKYCEEIFGQISFLGITPSTRLYNAVIDA 63
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ +++ + F M +P + Y LI + K+G VD A+ + ++M
Sbjct: 64 LVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDEALRLVKQMEG 117
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 13/261 (4%)
Query: 18 AVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFAR 76
A+ L+ +R + I + Y+ ++ + N++DL+ + K +L C N
Sbjct: 19 ALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQML------EEGCSPNLVT 72
Query: 77 AFIMTD------DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
I+ D T+ +V+ + N +I A KS Q E+AL +++ +
Sbjct: 73 YNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQPEQALKVYEKML 132
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
KP TY ++ G+ G+V L+ F M G + I+Y++L++ K R +
Sbjct: 133 AAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWE 192
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ L F +M + KP+++TY +LI + G+ E++ LF M+ Q +P Y LI
Sbjct: 193 MALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLI 252
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
++ G+ A+ FE+M S
Sbjct: 253 TAYERGGQWRRALKAFEQMQS 273
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
Q L E+++ S +I A+ K Q+EKAL IF + C+ ++ITY+ ++
Sbjct: 123 QALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSLI 182
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ GR L F+ M + P+ ++YN+L+ + F +M G K
Sbjct: 183 SACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCK 242
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
PD +TY LI ++ R G +L+ F M+ Q P V+ SL+
Sbjct: 243 PDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 98/199 (49%), Gaps = 39/199 (19%)
Query: 109 IIFAFAKSRQIEKALLIFDHIK--GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I +Q+ +AL + ++ G+ C ++ TY+ ++++ + ++ + + M E
Sbjct: 6 MISQCGSHQQLRRALELVAEMRSRGIDC--NVHTYSALMNVCIKANELDLAQDVYKQMLE 63
Query: 167 AGVVPDFISYNTLLN---NLRKI---RRLDLCLI-------------------------- 194
G P+ ++YN L++ + RK RRL + L+
Sbjct: 64 EGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQPEQ 123
Query: 195 ---YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ +M +G+KP TYTALI ++G+ G +E++L +F DM ++ ++ Y SLI
Sbjct: 124 ALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSLIS 183
Query: 252 NLKKMGKVDLAMTIFEEMN 270
+K G+ ++A+ +F +M+
Sbjct: 184 ACEKAGRWEMALELFSKMH 202
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN V+ A ++ + + ++ + +L + S+ YT A+ + L +++
Sbjct: 108 YNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMI 167
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ ++I + +I A K+ + E AL +F + CKP+++TYN ++ G
Sbjct: 168 RRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWE 227
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
F M+ G PD I+Y L+ + + L F +M G PD + +L+
Sbjct: 228 KASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TY ++ G ++ L A M+ G+ + +Y+ L+N K LDL +++M
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 200 GESGIKPDLLTYTALID-----------------------------------SFGRTGNI 224
E G P+L+TY LID + ++G
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E++L+++ M ++PS Y +LI K G+V+ A+ IF +M
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDM 166
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G ++AA++LL+ + D + PNA YN ++ + ++ +F + ++ +
Sbjct: 173 INGLCKVGRITAALQLLKRV-DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV--A 229
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + D +T N +I F+ ++ A+
Sbjct: 230 KRICPDVFT---------------------------------YNALISGFSAVSKLNYAI 256
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ +K P++ T+NI++D + G+VND A M + + PD ++YN+L++
Sbjct: 257 DLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGY 316
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
I +++ F M G+ ++ YT +++ F + ++E++ LF +M+ ++I P++
Sbjct: 317 CSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNV 376
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y SLID L K+G++ A+ + +EM+
Sbjct: 377 VTYSSLIDGLCKLGRIFYALKLVDEMH 403
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 124/274 (45%), Gaps = 7/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N + L KA + S A+ L Q + + + F +N ++ ++ LSF I
Sbjct: 65 NKILSSLVKAKHHSTALSLHQQMELNGIESDFF---TFNILINCFSQLGLNSLSFSIFAK 121
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L ++ + + + Q L F ++VV + +I K +
Sbjct: 122 ILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGR 181
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I AL + + G +P+ + YN+++D + + VND + ++ M + PD +YN
Sbjct: 182 ITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNA 241
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ + +L+ + F +M + I P++ T+ L+D F + G + ++ + M +
Sbjct: 242 LISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDD 301
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I+P + Y SL+D + KV+ A IF+ M S
Sbjct: 302 IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASG 335
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 91/168 (54%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ + ++ F K + +++A+ +F+ ++ K P+++TY+ ++D L ++GR+ L
Sbjct: 340 NVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P+ ++Y+++L+ L K +D + + + GI+PD+ TYT LI ++
Sbjct: 400 DEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQS 459
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +E++ +F D+ + +Y Y +I G D A+ + +M
Sbjct: 460 GRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKM 507
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK G V+ A +++ ++ K+ P+ YN ++ N ++ + I +
Sbjct: 278 VDGFCKEGKVNDA-KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG 336
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT F + + EE+ +++ + +I K +I AL
Sbjct: 337 VIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYAL 396
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + P+++TY+ +LD L + V+ + ++K+ G+ PD +Y L+ L
Sbjct: 397 KLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGL 456
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ RL+ F ++ G D+ YT +I F G +++L L + M+ P+
Sbjct: 457 CQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNA 516
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I +L + + D A + EM
Sbjct: 517 KTYELVILSLFEKDENDTAEKLLREM 542
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 110 IFAFAKSRQIEKALLI--FDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+F+ +Q E+ LI F+H+ K P +N +L L + + L+ M+
Sbjct: 30 LFSQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMEL 89
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ DF ++N L+N ++ L F ++ + G P +T+ LI G+I +
Sbjct: 90 NGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQ 149
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+L + + Q Y +LI+ L K+G++ A+ + + ++ L
Sbjct: 150 ALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKL 196
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 34/270 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N ++ LC A A LL + DK+ L D++F IL D L
Sbjct: 326 NTLLKGLCSADRWEEAEGLLAEMFDKDCPLD----------------DVTFNILVDFLCQ 369
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + +++ +E++++ +I +I F K I++A
Sbjct: 370 NGLVD------------------RVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 411
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+++ + C+P+ ++Y IVL L R D + M + G P+ +++NTL+N
Sbjct: 412 VMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINF 471
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K ++ + ++M +G PDL++Y+ +ID G+ GN +E+L L N M ++ + P+
Sbjct: 472 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPN 531
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y S+ L G+++ + +FE + +
Sbjct: 532 TIIYSSIASALSGEGRINKVIQMFENIQDT 561
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 6/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVSS 63
+E C+A AV +L+ L + L + NC VL A + +D + ++L+DLL S
Sbjct: 153 LEAACRASGFRGAVGVLRDLHGRGCAL-DVGNCNLVLQAVCDQGPVDEAVRLLRDLL-PS 210
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
D Y R M + +EE+V P +I+ + +I ++ E+
Sbjct: 211 FGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFER 270
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ + C PD+ Y ++D + + R+ M G+ P+ + YNTLL
Sbjct: 271 VHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLK 330
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R + EM + D +T+ L+D + G ++ + + M + P
Sbjct: 331 GLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMP 390
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ++I+ K G +D A+ + M +
Sbjct: 391 DVITYTTVINGFCKEGLIDEAVMLLRSMAA 420
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ G V + +L+ + + +P+ Y V+ + ID + +L+ +
Sbjct: 364 VDFLCQNGLVDRVIEVLEQMLEHGC-MPDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + + +++Q P + + N +I K +E+A+
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 482
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G ++ L M + G+ P+ I Y+++ + L
Sbjct: 483 ELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASAL 542
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R++ + F + ++ ++ D + Y A+I S + G + ++ M P+
Sbjct: 543 SGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNE 602
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G V A I E+ S
Sbjct: 603 STYTILIRGLASEGFVKEAQEILTELCS 630
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N ++ + + E+A + + C D +T+NI++D L + G V+ ++
Sbjct: 321 NVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVL 380
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E G +PD I+Y T++N K +D ++ R M G +P+ ++YT ++
Sbjct: 381 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSA 440
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
++ L + M QQ P+ + +LI+ L K G V+ A+ + ++M N DL
Sbjct: 441 ERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 497
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 3/212 (1%)
Query: 63 SRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S ++ + YT F RA L ++++ + + + + + A ++
Sbjct: 104 SVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFR 163
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFISYNTL 179
A+ + + G C D+ N+VL + G V++ + + + G PD +SYN +
Sbjct: 164 GAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAV 223
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L L RR EM +G P+++T++ LI R G E + M +
Sbjct: 224 LRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGC 283
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + +Y ++ID + K ++++A I M S
Sbjct: 284 APDVRMYATIIDGVCKEERLEVARGILNRMPS 315
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ +I A K + K ++ ++ +CKP+L TYN + L + G V++ L
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G+ PD +Y L++ K +R + F M SG+ P+ TYTALID F + G
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
NIEE+LR+ ++M + ++ ++ Y ++I + K G++ AM++F EM
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 132/272 (48%), Gaps = 9/272 (3%)
Query: 6 IEKLCKAGNVSAAVRLL-QSLRD---KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I LC + ++ A +L Q +R+ N+F+ Y ++ A + + +++ ++LK ++
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFM---YGTLIKAYVQESRYEMAIELLKIMIA 514
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ CY + + + ++ + + I ++KS +I+
Sbjct: 515 NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQV 574
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A F + P+ + Y I++ VG + L+ F M E G++PD +Y+ +++
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIH 634
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+L K + + F + ++G+ PD+ Y +LI F + G+IE++ +L+++M I P
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINP 694
Query: 242 SIYVYRSLIDNLK--KMGKVDLAMTIFEEMNS 271
+I VY +LI++ K G + A +F+EM S
Sbjct: 695 NIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 131/270 (48%), Gaps = 6/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C GN A+ + + +K + +P+ AY+ ++ + ++ + + L +
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGL-IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII--FAFAKSRQIEK 121
Y + F D + +E++ +I+V N +I + + KS + +
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTE 716
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD + PD Y I++D G+ G + L+ F ++ V ++N+L++
Sbjct: 717 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLID 775
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ K ++ F +M + + P+++TYT LID++G+ +EE+ +LF DM+ + I P
Sbjct: 776 SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP 835
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y SL+ + ++G +++F++M +
Sbjct: 836 NTLTYTSLLLSYNQIGNRFKMISLFKDMEA 865
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ K GN+ A+R+ + + + L YN ++ A+ ++ + + ++L++
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y ++ + D + + E+ S + +I S ++KA
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + KP++ Y ++ + R + M GV+PD YN L+ L
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++++ + +MGE GIKP+ TY A I+ + ++G I+ + R F DM I P+
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y LI +G A++ F+ M
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCM 617
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 124/265 (46%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ K+ +++ A LL ++ + + P Y+ ++ ++D+ + ++L ++ +
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y +A++ + ++ ++ + N +I +++++E+A +
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + KP+ TY +++ + G + F M +G+VP+ + Y L+
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC 602
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ L F+ M E G+ PD+ Y+A+I S + G +E++ +F + + P ++
Sbjct: 603 DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y SLI K G ++ A +++EM
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEM 687
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 18/281 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK---NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
I+ CK G+V +L + + N+F YN + +T +D + ++ K ++
Sbjct: 249 IKAHCKVGDVIKGKMVLSEMEKECKPNLF---TYNAFIGGLCQTGAVDEALEVKKLMMEK 305
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF-----AFAKSR 117
YT F + + E + P S + NR + F K
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM-----PSSGLNPNRFTYTALIDGFIKEG 360
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
IE+AL I D + K +++TYN ++ + + G + ++ F M AG+ PD +YN
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYN 420
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ K + EM + P TY+ LI + +++++ + + M +
Sbjct: 421 LLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRN 480
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
++P++++Y +LI + + ++A+ + + M N L DL
Sbjct: 481 GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 133/310 (42%), Gaps = 44/310 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-----ETNDIDLSFQILK 57
N +I LC+ G V A+ + + + +K + P+ + L+ + + L F+ +
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLG-PDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ + YT FI + + L +E++ +++ N +I AK+
Sbjct: 339 SSGLNPNRFT---YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFASMK--------- 165
++ KA+ +F+ + +PD TYN+++D + + + ++L E + K
Sbjct: 396 EMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYS 455
Query: 166 -----------------------EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
GV P+ Y TL+ + R ++ + + M +
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G+ PDL Y LI R +EE+ L DM ++ I+P+ + Y + I+ K G++ +A
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVA 575
Query: 263 MTIFEEMNSS 272
F++M SS
Sbjct: 576 ERYFKDMLSS 585
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 20/279 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVL--VASAETNDIDLSFQILKD 58
N I CK G++ A +L + I PN YN ++ ++ ++ +F++ +
Sbjct: 665 NSLISGFCKEGDIEKASQLYDEMLHNGIN-PNIVVYNTLINDYGYCKSGNLTEAFKLFDE 723
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQ-------LLIFIEEVVQIASPESIIVVNRIIF 111
++ S+ +S D Y I+ D C + L +F E Q S S+ N +I
Sbjct: 724 MI--SKGISPDGYI----YCILIDGCGKEGNLEKALSLFHE--AQQKSVGSLSAFNSLID 775
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+F K ++ +A +FD + K P+++TY I++D G+ + + F M+ ++P
Sbjct: 776 SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP 835
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ ++Y +LL + +I + F++M GI D + Y + ++ + G E+L+L
Sbjct: 836 NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL 895
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
N + I+ V+ +LI +L K ++ + + EM
Sbjct: 896 NKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 934
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
+L ++I +D +G +N+ + F + G P I N L+ +L K + L +
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M E+ I PD+ TYT +I + + G++ + + ++M +++ +P+++ Y + I L +
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289
Query: 257 GKVDLAMTI 265
G VD A+ +
Sbjct: 290 GAVDEALEV 298
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/271 (18%), Positives = 112/271 (41%), Gaps = 41/271 (15%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNAY-NCVLV-ASAETNDIDLSFQILKDLLVSSRTLS 67
CK+GN++ A +L + K I P+ Y C+L+ + +++ + + + +++
Sbjct: 709 CKSGNLTEAFKLFDEMISKGIS-PDGYIYCILIDGCGKEGNLEKALSLFHE--AQQKSVG 765
Query: 68 S-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S + + +F + +++V +I+ +I A+ K+ +E+A +F
Sbjct: 766 SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 825
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY---------- 176
++ P+ +TY +L ++G M++ F M+ G+ D I+Y
Sbjct: 826 LDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKE 885
Query: 177 -------------------------NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
+ L+ +L K +++ L EMG+ + T
Sbjct: 886 GKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTC 945
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L+ F ++GN +E+ ++ M++ P+
Sbjct: 946 NTLLLGFYKSGNEDEASKVLGVMQRLGWVPT 976
>gi|341605697|gb|AEK82951.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFKRMEEE 186
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMMLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMSE 150
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 96/187 (51%)
Query: 83 DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
+C + + + E+ + + + N +I F + +++EKAL + + +KG C L+T+
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
I++D + G++++ + MK G+ D + Y +L+ LD F E+ E
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G P +TY LI F + G ++E+ +F M ++ +RP++Y Y LID L +GK A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 263 MTIFEEM 269
+ + M
Sbjct: 337 LQLLNLM 343
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 3/270 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I KLCK G V+ AV +++ ++ + N YN +L D+D + ++L +L S
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 65 TLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
D Y + Q L + +V+ + N ++ + K+ + KA
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ ++ I K + TY ++D + G +N M+ + + P YN LL++
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K LD F EM PD++++ +ID + G+I+ + L M + + P
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ Y LI+ K+G +D A++ F++M S
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDS 628
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 128/274 (46%), Gaps = 5/274 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ AV LL+ +R +N +P+ +YN V+ E +++ + ++ ++ S
Sbjct: 149 LKGLCRNLECGKAVSLLREMR-RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ S + AF + + F++E+ + ++V +I F ++++
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD + P ITYN ++ ++G++ + F M E GV P+ +Y L++ L
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ + L M E +P+ +TY +I+ + G + +++ + MK+++ RP
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
Y L+ L G +D A + M +SS +D
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK-NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCK + A+ + L +K N +L ++ + D++ + ++ K +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 62 SSRTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S +SD YT F T + + L+ V ++ S+ N ++ + K +
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP--SVFDYNCLLSSLCKEGSL 545
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +F+ ++ PD++++NI++D + G + + M AG+ PD +Y+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPD 207
+N K+ LD + +F +M +SG +PD
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPD 633
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC+A V AV +L+ + + P+ + ++ E I+ + ++ ++
Sbjct: 201 NTLIKALCRAHQVRTAVLMLEEMSSHGV-APDETTFTTLMQGFIEEGSIEAALRVKAKMM 259
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + + L +I++ + + N + ++ +
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVS 319
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + D + PD+ TYN V++ L + G +++ M + G +PD ++NTL+
Sbjct: 320 HALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 379
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L RL+ L RE+ G+ PD+ T+ LI++ + G+ +RLF +MK
Sbjct: 380 VALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCT 439
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P Y LID+L MGK+ A+ + EM S+
Sbjct: 440 PDEVTYNILIDHLCSMGKLGNALDLLNEMESN 471
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 127/274 (46%), Gaps = 7/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVR----LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N ++ LC+ G+VS A++ +LQ D ++F YN V+ ++ ++D + I+
Sbjct: 306 NTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVF---TYNTVINCLSKNGELDEAKGIVNQ 362
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + + A + + L E+ + N +I A K
Sbjct: 363 MVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 422
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +F+ +K C PD +TYNI++D L +G++ + L+ M+ G ++YNT
Sbjct: 423 PHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNT 482
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K R++ F +M GI +T+ LID + I+++ L M ++
Sbjct: 483 IIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 542
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++P+ Y S++ + K G + A I E M ++
Sbjct: 543 LQPNNITYNSILTHYCKQGNIKKAADILETMTAN 576
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F + L ++ ++Q + N +I +K+ ++++A I + +
Sbjct: 305 YNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV 364
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C PD T+N ++ L R+ + L+ + G+ PD ++N L+N L K+
Sbjct: 365 DRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPH 424
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L + F EM SG PD +TY LID G + +L L N+M+ S Y ++I
Sbjct: 425 LGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTII 484
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
D L K +++ A +F++M++
Sbjct: 485 DALCKKMRIEEAEEVFDQMDA 505
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 38/276 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LCK G+ +RL + ++ +S T D ++++ IL D L S
Sbjct: 414 INALCKVGDPHLGIRLFEEMK---------------SSGCTPD-EVTYNILIDHLCSMGK 457
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
L + L + E+ P S + N II A K +IE+A +
Sbjct: 458 LGN------------------ALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEV 499
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
FD + +T+N ++D L + R++D M + G+ P+ I+YN++L + K
Sbjct: 500 FDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCK 559
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ M +G + D++TY LI+ + G + +L+L M+ + IRP+
Sbjct: 560 QGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKA 619
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
Y +I +L + + A+ +F EM +++ P D
Sbjct: 620 YNPVIQSLFRRNNLRDALNLFREM----TEVGEPPD 651
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 85/167 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ +N +I A ++ Q+ A+L+ + + PD T+ ++ G + L A
Sbjct: 197 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKA 256
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M EAG P ++ N L+N K+ R++ L Y ++ G +PD +TY + + G
Sbjct: 257 KMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNG 316
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +L++ + M Q+ P ++ Y ++I+ L K G++D A I +M
Sbjct: 317 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKAL-LIFDHIKG--LKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+VV + ++A+ R+ + A+ L+ + + + D + +N +L++L ++ + +
Sbjct: 125 VVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESV 184
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ M G+ PD ++ NTL+ L + ++ ++ EM G+ PD T+T L+ F
Sbjct: 185 YNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIE 244
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
G+IE +LR+ M + P+ LI+ KMG+V+ A+ ++
Sbjct: 245 EGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ 292
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A +K + +AL +F+ + C + Y ++D +G++GR + + F MK +G
Sbjct: 322 VIGALSKDGKPFEALAVFERMLKRGCPANAAMYTALIDSMGKLGREKEAMALFERMKASG 381
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ D ++Y ++N L + ++ L FR E G+ + + YT+LID FG+TG ++++
Sbjct: 382 IELDAVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIFYTSLIDGFGKTGMVDQAK 441
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
LF +M + P Y Y LID L K G+ D+A +E M D
Sbjct: 442 ELFEEMIAKGFVPDSYCYNVLIDALVKAGRTDIACAFYERMEDDGCD 488
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 103/193 (53%), Gaps = 5/193 (2%)
Query: 85 TQLLIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGL-KCKPDLITYN 142
++ L++ + +++A E S + N ++ + ++ A+ +FD + + +PD+++YN
Sbjct: 188 SEELLWAWQAMRLAGVEPSRLTYNCLLDGLVNAGLLDTAINVFDAMSTEDRVRPDVVSYN 247
Query: 143 IVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
I++ R GR D ++ A ++E A + PD ++Y TL+ C+ F+EM E
Sbjct: 248 ILIKGYCRAGRTQDGMSRLADLREQAELAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEE 307
Query: 202 SGIKPDLL--TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G+ ++ Y +I + + G E+L +F M ++ + +Y +LID++ K+G+
Sbjct: 308 RGMGKEIPQHAYVLVIGALSKDGKPFEALAVFERMLKRGCPANAAMYTALIDSMGKLGRE 367
Query: 260 DLAMTIFEEMNSS 272
AM +FE M +S
Sbjct: 368 KEAMALFERMKAS 380
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 6/269 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLS-----FQILKDLL 60
I+ C+AG + L LR++ P+ + + ++ FQ +++
Sbjct: 250 IKGYCRAGRTQDGMSRLADLREQAELAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEERG 309
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + Y A + L E +++ P + + +I + K + +
Sbjct: 310 MG-KEIPQHAYVLVIGALSKDGKPFEALAVFERMLKRGCPANAAMYTALIDSMGKLGREK 368
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F+ +K + D +TY ++++ L R G + + L+ F S E GV + I Y +L+
Sbjct: 369 EAMALFERMKASGIELDAVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIFYTSLI 428
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D F EM G PD Y LID+ + G + + + M+
Sbjct: 429 DGFGKTGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRTDIACAFYERMEDDGCD 488
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y LID L K K + A+ ++ M
Sbjct: 489 QTVYTYTILIDGLFKEHKNEEALKFWDSM 517
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG-ESGIKP 206
L G ++L + +M+ AGV P ++YN LL+ L LD + F M E ++P
Sbjct: 182 LAAFGLSEELLWAWQAMRLAGVEPSRLTYNCLLDGLVNAGLLDTAINVFDAMSTEDRVRP 241
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D+++Y LI + R G ++ + D+++Q ++ P Y +L+ G + +
Sbjct: 242 DVVSYNILIKGYCRAGRTQDGMSRLADLREQAELAPDKVTYLTLMQRHYSEGTFPQCIAL 301
Query: 266 FEEMN 270
F+EM
Sbjct: 302 FQEME 306
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 101 ESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
E + VN I + F K+ +++A +F+ + PD YN+++D L + GR +
Sbjct: 414 EKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRTD 473
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ M++ G +Y L++ L K + + L ++ M + GI P + L
Sbjct: 474 IACAFYERMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRVLA 533
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+ +G + R+ +++ + P + +I+ L K G+ A
Sbjct: 534 NGLCLSGKFSRAWRILDELAPMGVIPET-AHEDMINVLCKTGRFKQA 579
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 109/266 (40%), Gaps = 2/266 (0%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDL 59
M I+ + K G A+ L + ++ I L Y ++ +++ + +
Sbjct: 353 MYTALIDSMGKLGREKEAMALFERMKASGIELDAVTYGVIVNCLCRFGNMEEALSCFRSC 412
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ +++ YT+ F T Q EE++ N +I A K+ +
Sbjct: 413 VEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRT 472
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A ++ ++ C + TY I++D L + + + L + SM + G+ P ++ L
Sbjct: 473 DIACAFYERMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRVL 532
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
N L + E+ G+ P+ + +I+ +TG +++ +L + + Q+
Sbjct: 533 ANGLCLSGKFSRAWRILDELAPMGVIPET-AHEDMINVLCKTGRFKQACKLADGIVQKGR 591
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTI 265
V +I+ L+K G DLA +
Sbjct: 592 EVPGRVRTMMINALRKAGNTDLAFKL 617
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 98/182 (53%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E++ + + + N ++ AF K ++++KA+ + + C PD+++YN +L L R
Sbjct: 109 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCR 168
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G V+ ++ +K G P ISYNT+++ L K + L EM G++PD++T
Sbjct: 169 NGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIIT 228
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
YT + R IEE++R F ++ IRP++ +Y +++ L K + A+ +F M
Sbjct: 229 YTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMI 288
Query: 271 SS 272
S+
Sbjct: 289 SN 290
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 91/182 (50%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+E + + + N ++ + + E A + + + C P+++T+N+++ L
Sbjct: 38 FLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLC 97
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R G V + + + G P+ +SYN LL+ K +++D + + M G PD++
Sbjct: 98 RRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIV 157
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y L+ + R G ++ ++ L + +K + P + Y ++ID L K GK A+ + +EM
Sbjct: 158 SYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM 217
Query: 270 NS 271
S
Sbjct: 218 IS 219
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 106/223 (47%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
++ + ++L+ + T +S Y AF + + F+E +V I+ N
Sbjct: 102 VEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNT 161
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A ++ +++ A+ + +KG C P LI+YN V+D L + G+ + L M G
Sbjct: 162 LLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKG 221
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+Y T+ + L + +++ + F ++ + GI+P ++ Y A++ + ++
Sbjct: 222 LQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAI 281
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LF+ M P+ Y L++ L G V A + ++ S
Sbjct: 282 DLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCS 324
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D ++ C PD+ITYN+VL+ + + GRV+D + ++ G P+ +SYN +L L
Sbjct: 3 LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
R + EM G P+++T+ LI R G +E ++ + + + P+
Sbjct: 63 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y L+ K K+D AM E M S
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVS 149
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC+ G V A+ LL L+ K + +YN V+ + + ++L +++
Sbjct: 160 NTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMI- 218
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S+ L D YT A D + + +V + ++++ N I+ K R+
Sbjct: 219 -SKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRET 277
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
A+ +F ++ C P+ TY I+++ L G V + + + GVV
Sbjct: 278 HNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A+RL + ++ PN Y ++ +D + ++ +D+ ++ + +T
Sbjct: 57 ALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALI 116
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR-QIEKALLIFDHIKGLKC 134
A+ L + + + ++I N +I A AK + E L +F ++
Sbjct: 117 NAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGI 176
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+PD+ITYN +L G V + F +M EAGVVPD I+YN L++ + R +
Sbjct: 177 QPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGE 236
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
REM ++G PD++ Y LI+++GR G + ++F M++ P + + +L++
Sbjct: 237 LLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYG 296
Query: 255 KMGKVDLAMTIFEEM 269
K G D +F +M
Sbjct: 297 KHGCYDEVRLLFTDM 311
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR---VNDMLN 159
II N ++ A + +E+A ++F + PD ITYN ++DI G+ R V ++L
Sbjct: 180 IITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLR 239
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
E M++AG PD ++YN L+ + + F++M E+G PD++T++ L++++G
Sbjct: 240 E---MEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYG 296
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G +E LF DMK++ P + Y +LI + G ++ +F ++
Sbjct: 297 KHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDL 346
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 26/278 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I + G A++ LL ++ + + PN YN V+ A A+ L ++ L L
Sbjct: 116 INAYGRNGQHEASLHLLARMKREKV-TPNLITYNTVINACAKGG---LEWEGLLGLFAQM 171
Query: 64 R------------TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
R TL S C + R + ++ + + E + P+SI N ++
Sbjct: 172 RHEGIQPDIITYNTLLSACSS---RGLV--EEAGMVFRTMNEAGVV--PDSI-TYNALVD 223
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+ ++ + E + ++ PD++ YNI+++ GR G+ F M+EAG P
Sbjct: 224 IYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTP 283
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D ++++TLL K D + F +M E G +PD+ TY LI FG+ G +ES+ LF
Sbjct: 284 DVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLF 343
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D+ + P + Y L+ + K G A I M
Sbjct: 344 WDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHM 381
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN +L A + ++ + + + + + S Y + D + + E+
Sbjct: 183 YNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREME 242
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
Q + ++ N +I A+ ++ + A +F ++ C PD++T++ +L+ G+ G +
Sbjct: 243 QAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYD 302
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
++ F MKE G PD +YNTL+ + + F ++ + G++PD+ TY L+
Sbjct: 303 EVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLL 362
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
S G+ G + + ++ M Q + P+ + LI A F M S
Sbjct: 363 YSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKES 419
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
I FA+ +KAL +F +++ + CKP+ Y I++ I+GR G ++ F M
Sbjct: 44 IFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLN 103
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG-NIEE 226
V + S+ L+N + + + L M + P+L+TY +I++ + G E
Sbjct: 104 DVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEG 163
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L LF M+ + I+P I Y +L+ G V+ A +F MN +
Sbjct: 164 LLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEA 209
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 35/205 (17%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ + ++ A+ K ++ L+F +K +PD+ TYN ++ + G+ G + +N F
Sbjct: 285 VVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFW 344
Query: 163 SMKEAGVVPDFISYNTLLNN---------LRKIRR--------------LDLCLIY---- 195
+ + GV PD +Y LL + +KI R L Y
Sbjct: 345 DLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAA 404
Query: 196 --------FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
F M ESG KPDL TY ALI + G E+ + M + I + Y
Sbjct: 405 LYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYN 464
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNSS 272
SLI+ + G D A+ +M +
Sbjct: 465 SLIEAFGRGGLFDDAIEFSRDMEEA 489
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A+ + +A F+ +K CKPDL TYN ++ G + + + +M + G
Sbjct: 396 LITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEG 455
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ D +YN+L+ + D + + R+M E+ P+ TY AL+ + G +E+
Sbjct: 456 ISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAK 515
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F D++ PS+ Y L+ + + D A + EEM
Sbjct: 516 AQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM 556
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 75/172 (43%), Gaps = 11/172 (6%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N +I AF + + A+ ++ +C P+ TY ++ + G ++ +F
Sbjct: 460 VSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFL 519
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++ G +P SY LL+ + R D EM ++P++ + ++ + G
Sbjct: 520 DLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM----LEPNMPSIYGVVGGILK-G 574
Query: 223 NIEESLRL------FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+++ F+ +K + ++ Y +L++ L +G+ + A +F E
Sbjct: 575 EMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNALLEALWCLGQRERACRVFAE 626
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
C+ I + G + A + L L+ N + P YN +L + + ILK++
Sbjct: 289 CSTVISACGREGMLDEARKFLAELK-FNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEM 347
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ S Y A ++ + + I+ + + I +I A+ K+ +
Sbjct: 348 EDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGRE 407
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ AL +F +K L C P++ TYN VL +LG+ R D++ MK G P+ ++NT+
Sbjct: 408 DDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 467
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + + + REM G +PD T+ LI ++ R G+ +S +++ +M +
Sbjct: 468 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGF 527
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y +L++ L + G A ++ ++M +
Sbjct: 528 TPCVTTYNALLNALARRGDWKAAESVIQDMRT 559
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 127/271 (46%), Gaps = 19/271 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L + G+ AA ++Q +R K F PN +Y+ +L ++ ++ ++ K++
Sbjct: 535 NALLNALARRGDWKAAESVIQDMRTKG-FKPNENSYSLLLHCYSKAGNVKGIEKVEKEIY 593
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIE----EVVQIASPESIIVVNRIIFAFA 114
+ ++ R ++T+ + L +E ++ + ++V+N ++ FA
Sbjct: 594 ------DGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFA 647
Query: 115 KSRQIEKA--LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
+++ KA +L F H GL+ P+L TYN ++D+ R G ++ +G PD
Sbjct: 648 RNKMFSKAREMLHFIHECGLQ--PNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPD 705
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+SYNT++ + + + EM GI+P ++TY + + +E+ +
Sbjct: 706 VVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIR 765
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
M + RPS Y+ L+D K GK + AM
Sbjct: 766 FMIEHNCRPSELTYKILVDGYCKAGKYEEAM 796
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 36/197 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND------------ 156
I+ ++A++ + ++A+ +F +K + P L+TYN++LD+ G++GR D
Sbjct: 221 ILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSK 280
Query: 157 --------------------MLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
ML+E A +K G P ++YN++L K
Sbjct: 281 GLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEA 340
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L +EM ++ PD +TY L ++ R G ++E + + + M + + P+ Y ++ID
Sbjct: 341 LSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDA 400
Query: 253 LKKMGKVDLAMTIFEEM 269
K G+ D A+ +F M
Sbjct: 401 YGKAGREDDALRLFSLM 417
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Query: 87 LLIFIEEVVQIASPESIIVVNRII----FAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
LL+F + S +++ + N+++ + Q A +FD I K D+ Y
Sbjct: 160 LLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYT 219
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI-RRLDLCLIYFREMGE 201
+L R G+ ++ F MKE G+ P ++YN +L+ K+ R D L EM
Sbjct: 220 TILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRS 279
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G++ D T + +I + GR G ++E+ + ++K +P Y S++ K G
Sbjct: 280 KGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTE 339
Query: 262 AMTIFEEM 269
A++I +EM
Sbjct: 340 ALSILKEM 347
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 33/271 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ C+AG A+ L +R++ AE + +++ L L S T
Sbjct: 251 IKGYCRAGRAQDAMARLAHMREQ---------------AELSPDKVTYLTLMQLHYSEGT 295
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS-PESIIVVNRIIFAFAKSRQIEKALL 124
S C +L +EE+ P+ V+ +I A K + + L
Sbjct: 296 FS---------------QCIRLFQEMEEMGMGKDIPQHAYVL--VIGALCKEGKPFEGLA 338
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ + Y ++D +G+ GR N+ + F MK +G+ D I+Y ++N L
Sbjct: 339 VFERMLKSGYPAKAAMYTALIDTMGKFGRENEAMLLFERMKASGLELDAITYGVIVNCLC 398
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ +LD ++ FR E GI + + YT+LID FG+ G ++++ LF +MK + P Y
Sbjct: 399 RFGKLDEAILCFRNCVEKGIAVNAIFYTSLIDGFGKAGMVDQAQELFEEMKVKGFVPDSY 458
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
Y LID L K G++D A +++ M D
Sbjct: 459 CYNVLIDGLAKAGRLDDACALYKRMEDDGCD 489
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 5/190 (2%)
Query: 88 LIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGL-KCKPDLITYNIVL 145
L++ +++A E S + N ++ A + ++ A+ +FD + + +PD+++YNI++
Sbjct: 192 LLWAWSAMRLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILI 251
Query: 146 DILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
R GR D + A M+E A + PD ++Y TL+ C+ F+EM E G+
Sbjct: 252 KGYCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGM 311
Query: 205 KPDL--LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
D+ Y +I + + G E L +F M + +Y +LID + K G+ + A
Sbjct: 312 GKDIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENEA 371
Query: 263 MTIFEEMNSS 272
M +FE M +S
Sbjct: 372 MLLFERMKAS 381
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG-ESGIKP 206
L +G +++L +++M+ AGV P ++YN LL+ L LD + F M E ++P
Sbjct: 183 LAALGLADELLWAWSAMRLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRP 242
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D+++Y LI + R G ++++ M++Q ++ P Y +L+ G + +
Sbjct: 243 DVVSYNILIKGYCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHYSEGTFSQCIRL 302
Query: 266 FEEMN 270
F+EM
Sbjct: 303 FQEME 307
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 101 ESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
E I VN I + F K+ +++A +F+ +K PD YN+++D L + GR++
Sbjct: 415 EKGIAVNAIFYTSLIDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLD 474
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D + M++ G +Y +++ L K + + + ++ M + GI P +
Sbjct: 475 DACALYKRMEDDGCDQTVYTYTIIIDGLFKKHKNEEAIKFWNTMIDKGITPTAAAFRTFA 534
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+ +G + R+ +++ + P + +I+ L K G+ A
Sbjct: 535 NGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQA 580
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S +L+ +L + D L + M +G++P +TY L+D G ++ ++ +F+ M
Sbjct: 175 SSASLIRSLAALGLADELLWAWSAMRLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDAM 234
Query: 235 KQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++RP + Y LI + G+ AM M
Sbjct: 235 STEDRVRPDVVSYNILIKGYCRAGRAQDAMARLAHM 270
>gi|399107214|gb|AFP20371.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 81 IBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 185
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 13 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 70
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + Y SL
Sbjct: 71 EDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSL 130
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
ID L K G++D A +FEEM+
Sbjct: 131 IDGLGKAGRIDEAERLFEEMS 151
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|341605693|gb|AEK82949.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 90/165 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 89/163 (54%), Gaps = 1/163 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNL 253
ALID+ + G ++E++ LF M++++ ++Y Y LI +
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGM 203
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|341605707|gb|AEK82956.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + Y SL
Sbjct: 69 EDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMS 149
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
Length = 975
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 130/271 (47%), Gaps = 3/271 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M N I +LC + + ++D + P+ YN + + +L++
Sbjct: 477 MFNDLIHELCNMDRLEEGYGIFNQMKDLGL-TPSEFTYNSLFYGICRRKYPKAALDLLRE 535
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + T + + T+ + F++ ++QI I+ + + + +
Sbjct: 536 MQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGE 595
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ AL +F I PD++ +NI+++ + ++++ M E G+ P ++YN
Sbjct: 596 VDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNL 655
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ K R++ + Y +M +P ++TYT+LID F G +E+++L+ +M+++
Sbjct: 656 MIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKG 715
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y + I+ L+K G+++ A+T FEEM
Sbjct: 716 CAPNNIAYTAFINGLRKCGRIETALTYFEEM 746
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 125/277 (45%), Gaps = 12/277 (4%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C +++LC +G V+ AV+ L + FLP+ Y+ + T ++D + + +D+
Sbjct: 548 CTEMVQQLCFSGRVTEAVQFLDGMLQIG-FLPDIVTYSAAMNGMCNTGEVDDALHLFRDI 606
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ F + + +EE+++ S++ N +I K+ +I
Sbjct: 607 SCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRI 666
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKA+ D + + +P +ITY ++D GR ++ + + M+E G P+ I+Y
Sbjct: 667 EKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAF 726
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N LRK R++ L YF EM G + D + I+ G+ + L ++ Q+
Sbjct: 727 INGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGHPMKGCELLKEVLQKD- 785
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ +NLK +G ++ A+ + + SD+
Sbjct: 786 --------TYGNNLKMVGLINEAVVELSKDGITSSDI 814
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 51/269 (18%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN VL +++ ++Q+L+ ++ + +++D I D
Sbjct: 389 YNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIRED------------- 435
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
A P S N ++ K ++++ AL + + L CK ++ +N ++ L + R+
Sbjct: 436 --AKPNSD-SFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLE 492
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG----IK------ 205
+ F MK+ G+ P +YN+L + + + L REM +G IK
Sbjct: 493 EGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMV 552
Query: 206 -------------------------PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
PD++TY+A ++ TG ++++L LF D+ +
Sbjct: 553 QQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYL 612
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + + LI+ +K K+D A I EEM
Sbjct: 613 PDVVAHNILINGFRKSSKLDEAQKIMEEM 641
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 26/276 (9%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL------ 60
L AG AVR + R PN+Y NC+L A A+ D + L++++
Sbjct: 148 LGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDG 207
Query: 61 -VSSRTLSS--DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
V TL+S CY N R DD + + E+ + V+ ++ AF+K
Sbjct: 208 SVDKYTLTSLLRCYCNAGR----PDDANDVFQRMSELGWVDEH----VLTTLMVAFSKWG 259
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ + ++ L + T ++++ + GRV+ ++ FA M G V D Y+
Sbjct: 260 KVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYS 319
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND---- 233
L+ L + + + + F+EM SG+ PD+ +I++F R G+ N+
Sbjct: 320 VLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEY 379
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+K + P +Y +++ L G+V+ A + M
Sbjct: 380 LKSGSVVP---LYNVVLEELVHCGEVEAAYQLLRSM 412
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 108/283 (38%), Gaps = 21/283 (7%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSRTLSSD 69
K G V AV LL S+ + L VLV + +D + + ++ +
Sbjct: 257 KWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLA 316
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK-ALLIFDH 128
Y+ D + + +E+ + ++ ++I AF + I ++
Sbjct: 317 MYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINEN 376
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV------------------ 170
+ LK + YN+VL+ L G V SM G
Sbjct: 377 AEYLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDA 436
Query: 171 -PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P+ S+N ++ L K+++LD+ L ++M G K +L + LI +EE
Sbjct: 437 KPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYG 496
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+FN MK + PS + Y SL + + A+ + EM ++
Sbjct: 497 IFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTN 539
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 120 EKALLIFDHIKG-LKCKPDLITYNIVLDILGRVGRVNDM---LNEFASMKEAGVVPDFIS 175
+ A+ FD + C P+ TYN +LD L + GR +D L E + G V D +
Sbjct: 155 DTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSV-DKYT 213
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+LL R D F+ M E G D T L+ +F + G ++ ++ L M+
Sbjct: 214 LTSLLRCYCNAGRPDDANDVFQRMSELGWV-DEHVLTTLMVAFSKWGKVDGAVELLGSME 272
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+R S L+ K G+VD AM +F +M S
Sbjct: 273 ALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVS 308
>gi|341605737|gb|AEK82971.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605739|gb|AEK82972.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605741|gb|AEK82973.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRXNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSMFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMSE 150
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 89/201 (44%), Gaps = 2/201 (0%)
Query: 19 VRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARA 77
V L Q + +K I +P + ++ V+ + ++ + + ++++ + YT
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
+ + + + ++ ++ + ++ K+ ++E+AL F + +
Sbjct: 62 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAIN 121
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+ Y+ ++D LG+ GR+++ F M E G D YN L++ L K ++D + F+
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 181
Query: 198 EM-GESGIKPDLLTYTALIDS 217
M E G + TYT LI
Sbjct: 182 RMEEEEGCDQTVYTYTILISG 202
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+ C+AGN+S A R+ ++ I PN Y +V A + I + + +++
Sbjct: 257 VHGWCRAGNISEAERVFGEMKMAGI-QPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVG 315
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ + N R + ++L ++ ++ P I N +I + + +E+A+
Sbjct: 316 CDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 375
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + +K C + ++N + + ++G VN FA MK+ P+ ++YN L+
Sbjct: 376 KILNSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMF 434
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ-IRPS 242
+ D+ L +EM E+ I+P+ TY LI +F G+ + F +M +++ +RPS
Sbjct: 435 ADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPS 494
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ VY ++ L+K G++ + E+M
Sbjct: 495 LPVYEMVLQQLRKAGQLKKHEELVEKM 521
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K RQ + A + D +K + + T+ I++ + G + ++ F M++ G PD
Sbjct: 157 GKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDK 216
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
I+++ ++++L K RR +F + + +PD++ YT+L+ + R GNI E+ R+F +
Sbjct: 217 IAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGE 275
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
MK I+P++Y Y +ID L + G++ A +F EM
Sbjct: 276 MKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEM 311
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V ++ + ++ I +A +F +K +P++ TY+IV+D L R G++ + F+
Sbjct: 250 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFS 309
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + G P+ I++N L+ K R + L + +M G PD +TY LI+S R
Sbjct: 310 EMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDD 369
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N+EE++++ N +K + + + + + K+G V+ A +F +M
Sbjct: 370 NLEEAVKILNSVK-KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKM 415
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P Y ++ + + DL++Q++ + + + + +T R ++ + +
Sbjct: 146 PEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFN 205
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ I + +I + +K R+ +A FD +K + +PD++ Y ++ R G
Sbjct: 206 RMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAG 264
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+++ F MK AG+ P+ +Y+ +++ L + ++ F EM + G P+ +T+
Sbjct: 265 NISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFN 324
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI------DNLKKMGKV 259
L+ + G E+ L+++N MK+ P Y LI DNL++ K+
Sbjct: 325 NLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 377
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V+I I+V R + K+ +A+ F+ ++ CKPD I +++V+ L + R
Sbjct: 177 VEIPVETFTILVRR----YVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRA 232
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ + F S+K+ PD + Y +L++ + + F EM +GI+P++ TY+ +
Sbjct: 233 IEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIV 291
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ID+ R+G I + +F++M P+ + +L+ K G+ + + ++ +M
Sbjct: 292 IDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQM 346
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 126/275 (45%), Gaps = 1/275 (0%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
YIE LC ++LQ+ ++ NI + AY V+ +D + +L D+
Sbjct: 275 YIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQE 334
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ CY+ R + D ++ L ++ + ++V+ I+ F + + +
Sbjct: 335 LISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVV 394
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
F K L+ D ++YNIV+D L ++ +V+ + MK + D + Y TL+N
Sbjct: 395 EEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGY 454
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +L F EM G++PD++T+ L+ +F R G E+L+L+ MK Q ++P+
Sbjct: 455 CHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNA 514
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
+ +I+ L GKV A F M D G
Sbjct: 515 ITHNVMIEGLCIGGKVTEAEAFFCNMEDKSIDNYG 549
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 132/281 (46%), Gaps = 30/281 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N IE LC G V+ A ++ DK+I + Y ++ E + + ++ +L S
Sbjct: 518 NVMIEGLCIGGKVTEAEAFFCNMEDKSI---DNYGAMITGYCEAKHTEKASELFFEL--S 572
Query: 63 SRTLSSDCYTNFARAFI---MTDDCTQ-----LLIFIEEVVQIASPESIIVVNRIIFAFA 114
R L D R +I + C + L ++ ++ + S + ++I A
Sbjct: 573 ERGLLMD------RGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACY 626
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ + A +FD ++ PD+ TY ++++ R R+++ N F MK G+ PD +
Sbjct: 627 RAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLV 686
Query: 175 SYNTLLNN----------LRKIRRLDLCLI-YFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ LL+ RK + ++L ++EM + I+PD++ YTALID +
Sbjct: 687 TFTVLLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDR 746
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+E+++ L+++M + + P +L+ + G VD+ +T
Sbjct: 747 LEDAIGLYDEMMYRGVEPDRATCTALLSGCRNRGDVDMVLT 787
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
I N ++ + +++ AL I+ +K L P+ TY+I++ R G + + N F
Sbjct: 198 HIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVF 257
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+ GV+P+ +Y T + L +R D + E I D+ Y A+I F
Sbjct: 258 QEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNE 317
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ + + DM++Q++ Y LI K G + A+ + +M S
Sbjct: 318 MKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKALALHNDMES 367
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 113/268 (42%), Gaps = 5/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ C+ G S V + +D IFL +YN V+ A + +D + +L ++
Sbjct: 381 LQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQM 440
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ YT + EE+ ++ N ++ AF++ +AL
Sbjct: 441 DMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALK 500
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+++++K KP+ IT+N++++ L G+V + F +M++ + +Y ++
Sbjct: 501 LYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSID----NYGAMITGYC 556
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ + + F E+ E G+ D L++ G + +L L M + PS
Sbjct: 557 EAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKD 616
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y +I + G + A +F+ + S
Sbjct: 617 MYGKVITACYRAGDMRNAEAVFDILRKS 644
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 61/117 (52%)
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G +++ +N +K G +P ++N L+N L ++D L ++++ G+ P+ T
Sbjct: 177 AGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYT 236
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
Y+ +I +F R G++ E+ +F +M+ + P+ Y Y + I+ L + D + +
Sbjct: 237 YSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQ 293
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 1 MCNGYI----EKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQI 55
M GYI EKLC+ G A+ LL+++ D N+ + Y V+ A D+ + +
Sbjct: 578 MDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAV 637
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII----- 110
L S T YT + ++ +++ ++ ++
Sbjct: 638 FDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLK 697
Query: 111 ----FAFAKSRQIEK--ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
AFA+ R+ A I+ ++ + +PD+I Y ++D +V R+ D + + M
Sbjct: 698 RVHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEM 757
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
GV PD + LL+ R +D+ L
Sbjct: 758 MYRGVEPDRATCTALLSGCRNRGDVDMVL 786
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK G +AVR+L + +K PN Y+ +L + D + +L +
Sbjct: 358 MHGLCKLGRCGSAVRMLDEMEEKGCA-PNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKG 416
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+++S Y A + + ++E+ I N II+ + Q+++A
Sbjct: 417 FSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAE 476
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF ++ + ITYN ++ L GR + L M G D +SYN L+ L
Sbjct: 477 HIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKAL 536
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +D ++ EM GIKP+ +Y LI+ + G + ++L L +M Q + P I
Sbjct: 537 CKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 596
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI+ L K+G A+ + E++
Sbjct: 597 VTYNTLINGLCKVGWTHAALNLLEKL 622
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I L K G + A+RL+Q ++ + P+ YN ++ + +D + I +LL
Sbjct: 425 NGIIYALGKDGKLDEAMRLVQEMKSQGCK-PDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y A + + + L E+V P ++ N +I A K ++
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVD 543
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+++++ + + KP+ +YN++++ L + G+V D L M G+ PD ++YNTL+
Sbjct: 544 RSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 603
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K+ L ++ + PD++TY LI + ++++ L + I
Sbjct: 604 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIV 663
Query: 241 PSIYVYRSLIDN 252
P+ + ++ N
Sbjct: 664 PNERTWGMMVQN 675
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 122/266 (45%), Gaps = 13/266 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-----NAYNCVLVASAETNDIDLSFQILKDLL 60
I L G V+ A LL D+ + + N +N V++ + + +++ ++
Sbjct: 222 IHALVAQGGVAEAATLL----DEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMM 277
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T S Y R T + + V ++ +++++N +I ++
Sbjct: 278 MHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV----NVVMLNTVIRGCLAEGKLA 333
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +++ + C PD+ TYNI++ L ++GR + M+E G P+ ++Y+TLL
Sbjct: 334 RATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLL 393
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++ + D +M G + Y +I + G+ G ++E++RL +MK Q +
Sbjct: 394 HSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCK 453
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIF 266
P I Y ++I +L ++D A IF
Sbjct: 454 PDICTYNTIIYHLCNNDQMDEAEHIF 479
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 31/232 (13%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y A + + ++E++ + + N ++ + +A + D +
Sbjct: 218 YQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMM 277
Query: 131 GLKCKPDLITYNIVL-------------DILGRVGRVND-MLNE---------------- 160
C P ++TY +L +LGRV VN MLN
Sbjct: 278 MHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATE 337
Query: 161 -FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M G PD +YN L++ L K+ R + EM E G P+++TY+ L+ SF
Sbjct: 338 LYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC 397
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
R G +++ + + M + + Y +I L K GK+D AM + +EM S
Sbjct: 398 RNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKS 449
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 113/288 (39%), Gaps = 35/288 (12%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A+ LL + + P+ +YN VL A + + + + +L ++ + A
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
RA L + + + ++ +I A + +A + D + + C
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247
Query: 136 PDLITYN-IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD---- 190
D+ T+N +VL + G +G V + M G P ++Y LL L + R+ D
Sbjct: 248 ADVNTFNDVVLGLCG-LGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306
Query: 191 ------------------LCLI---------YFREMGESGIKPDLLTYTALIDSFGRTGN 223
CL + MG G PD+ TY L+ + G
Sbjct: 307 MLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGR 366
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++R+ ++M+++ P+I Y +L+ + + G D A + ++M++
Sbjct: 367 CGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSA 414
>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 978
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 137/272 (50%), Gaps = 15/272 (5%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
C A ++ A+R+L L + + Y ++ A A+ +DL FQI ++ V+ + +
Sbjct: 306 CHAKDIDGALRVLALLESRGLKADCMFYTSLISACAKAGKVDLLFQIFHEMEVAG--IEA 363
Query: 69 DCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ +T ARA + I I + V+ P+ +I N +I A ++ +++A
Sbjct: 364 NVHTFGAMIDGCARAGQLPKAFGAYGIMISKNVK---PDRVIF-NTLINACTRAGAVQRA 419
Query: 123 LLIFDHIKG--LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +K KPD +TY ++ R G V+ L + +M+E+ V Y ++
Sbjct: 420 FDVLTDMKAEATPIKPDHVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVV 479
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + +D L+ + ++ + G+KPD + ++AL+D+ G +IE++ + +MK++ ++
Sbjct: 480 HACSQKGNVDYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLK 539
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P VY SL+ +G + A+ +++++ SS
Sbjct: 540 PGAVVYSSLMGVCSNLGNWEKALEVYQDIRSS 571
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 114/267 (42%), Gaps = 38/267 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR-DKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
N I +AG V A +L ++ + P+ Y ++ A A ++D + ++ +++
Sbjct: 404 NTLINACTRAGAVQRAFDVLTDMKAEATPIKPDHVTYGALISACARAGEVDRALEVYQNM 463
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S+ S CYT ++ A ++ +
Sbjct: 464 RESNVKGSPACYTA-----------------------------------VVHACSQKGNV 488
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ ALL++D +K KPD + ++ ++D G + + A+MK+ G+ P + Y++L
Sbjct: 489 DYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKPGAVVYSSL 548
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + + L ++++ SG++P + T+ AL+ + +L + D+K I
Sbjct: 549 MGVCSNLGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQFTRALSILQDVKNSGI 608
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIF 266
P+ Y L+ +K D+A+ ++
Sbjct: 609 MPNQISYSILLRACEKEKMADMALDLY 635
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 68/139 (48%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L Y ++L + ++ L A ++ G+ D + Y +L++ K ++DL F
Sbjct: 295 LQHYTMLLSVCCHAKDIDGALRVLALLESRGLKADCMFYTSLISACAKAGKVDLLFQIFH 354
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM +GI+ ++ T+ A+ID R G + ++ + M + ++P ++ +LI+ + G
Sbjct: 355 EMEVAGIEANVHTFGAMIDGCARAGQLPKAFGAYGIMISKNVKPDRVIFNTLINACTRAG 414
Query: 258 KVDLAMTIFEEMNSSLSDL 276
V A + +M + + +
Sbjct: 415 AVQRAFDVLTDMKAEATPI 433
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 150 RVGRVNDMLNEFASMKEAGVVPDF-ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ GR+ D L M +AG + ++++ + ++ + + M E L
Sbjct: 239 KAGRIKDCLKLLGEMDKAGKLARMKVNHSKFYEACKARGSVEDAFAFAKLMREFST---L 295
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
YT L+ +I+ +LR+ ++ + ++ Y SLI K GKVDL IF E
Sbjct: 296 QHYTMLLSVCCHAKDIDGALRVLALLESRGLKADCMFYTSLISACAKAGKVDLLFQIFHE 355
Query: 269 M 269
M
Sbjct: 356 M 356
>gi|341605695|gb|AEK82950.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFKRMEEE 186
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMMLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMSE 150
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 97/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F +E+++ P S+ N ++ F K R I A +FD I +P +++YN +++
Sbjct: 111 FYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 171 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ +L ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 231 TFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 290
Query: 270 N 270
+
Sbjct: 291 S 291
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A +FD +KGL P+ +T+ ++D + GRV+ L + M
Sbjct: 200 LINGLCKESKMDDANELFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLALEIYKQMLS 257
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
++PD I+YNTL+ L K L EM G+KPD +TYTALID + G+++
Sbjct: 258 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDT 317
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M Q+ IR Y +LI L + G+ A + EM S
Sbjct: 318 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 362
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 21/274 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK ++ A + ++ K P+ +YN ++ D+D F++ + S
Sbjct: 131 MHRFCKERDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASG 189
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD +L F E +V+ P + +I K+
Sbjct: 190 --VQPDVYTYSVLINGLCKESKM-DDANEL--FDEMLVKGLVPNGVTFTT-LIDGHCKNG 243
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFI 174
+++ AL I+ + PDLITYN ++ L + G + +D+++E SMK G+ PD I
Sbjct: 244 RVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMK--GLKPDKI 300
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y L++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 301 TYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 360
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++P Y +I+ K G V + +E
Sbjct: 361 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 7/233 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
NGYI + G++ RL ++ + P+ Y ++ + + + +D + ++ ++L
Sbjct: 167 NGYI----RLGDLDEGFRLKSAMHASGV-QPDVYTYSVLINGLCKESKMDDANELFDEML 221
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V + +T L ++++ + +I N +I+ K ++
Sbjct: 222 VKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 281
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D + KPD ITY ++D + G ++ M + + D ++Y L+
Sbjct: 282 QAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 341
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+ L + R REM G+KPD TYT +I+ F + G++ + +L +
Sbjct: 342 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 66/138 (47%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E F + +L +L K++ L
Sbjct: 51 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 110
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+++E+ ESG L + L+ F + +I + +F+ + + +RPS+ Y +L++
Sbjct: 111 FYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M++S
Sbjct: 171 RLGDLDEGFRLKSAMHAS 188
>gi|341605691|gb|AEK82948.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605825|gb|AEK83015.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEE 186
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMSE 150
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|341605797|gb|AEK83001.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605799|gb|AEK83002.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605801|gb|AEK83003.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 90/165 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 99/180 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+ + ++ N ++ + +I+K IF + KPD+ +Y+I ++
Sbjct: 132 LLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYC 191
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+V ++++ + F M GVVP+ ++YNTL+ L + R + FR+M G+ PD+L
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDIL 251
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ L+D F + GN++E L LF +M+++ ++P + VY +I+ + + KV A + +
Sbjct: 252 AYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRL 311
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 89/160 (55%)
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
I + K +I++A+ +FD + P+ +TYN ++ L + R D F M G+
Sbjct: 187 INGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGL 246
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
PD ++Y+TLL+ K LD L+ F+EM +KPDL+ YT +I+ R+ ++++
Sbjct: 247 SPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKE 306
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + + + ++P ++ Y +L+D L + G + A+ +F +M
Sbjct: 307 VLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKM 346
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLLVSS 63
I+ +C+ G A LL+ + +P+ C ++ ID +I L+ S
Sbjct: 117 IDGVCRIGKTELAAGLLKEMGLVGC-VPDVVTCNSLMRGYCSQGKIDKVRKIFH--LMVS 173
Query: 64 RTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ L D Y+ F + + + + +E+ + + N +I A ++ +
Sbjct: 174 KGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRD 233
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++F + PD++ Y+ +LD + G +++ML F M+ V PD + Y ++N
Sbjct: 234 AQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIIN 293
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + R++ + G+KPD+ TYTAL+D R G+I E+LRLF M++ P
Sbjct: 294 GMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMP 353
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+ + + + EM
Sbjct: 354 GSCSYNVLLQGCLQHNDTSTVVQLIHEM 381
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 91/169 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
II NR++ + + ++ E + +F ++ K ++ T +I+++ + V+ + F
Sbjct: 40 IIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFG 99
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ G PD + + TL++ + +I + +L +EMG G PD++T +L+ + G
Sbjct: 100 KTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQG 159
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I++ ++F+ M + ++P +Y Y I+ K+ K+D AM +F+EM+
Sbjct: 160 KIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSH 208
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++ ++ +I F ++ +F KPD++ + ++D + R+G+
Sbjct: 74 NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLL 133
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M G VPD ++ N+L+ ++D F M G+KPD+ +Y+ I+ + +
Sbjct: 134 KEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKV 193
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+E++ LF++M + + P+ Y +LI L + + A +F +M
Sbjct: 194 EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKM 241
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 19/247 (7%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAET---NDIDLSFQILKDL 59
+I CK + A+ L + + + +PNA YN ++ A + D + F+ +
Sbjct: 186 FINGYCKVEKIDEAMELFDEMSHRGV-VPNAVTYNTLIKALCQALRPRDAQVLFRKMCAC 244
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+S L+ Y+ F + ++L+ +E+ + ++V II +SR++
Sbjct: 245 GLSPDILA---YSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKV 301
Query: 120 EKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ A + ++GLK PD+ TY ++D L R G + + L F M+E G +P SYN
Sbjct: 302 KDAKEVLSRLIVEGLK--PDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYN 359
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN----IEESLRLFND 233
LL + + EM + G D +T T L D GN I++ L LF
Sbjct: 360 VLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKDFL--PGNDSPAIKQLLGLFEG 417
Query: 234 MKQQQIR 240
+ +++
Sbjct: 418 HQGVKVK 424
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 67/122 (54%)
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G ++D L F M + P I +N LL+++ ++++ + + F+EM GIK ++
Sbjct: 16 GYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNV 75
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
T + LI+ F +++ +F ++ +P + ++ +LID + ++GK +LA + +E
Sbjct: 76 CTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKE 135
Query: 269 MN 270
M
Sbjct: 136 MG 137
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/235 (17%), Positives = 98/235 (41%), Gaps = 3/235 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN + C G + ++ + K + P+ +Y+ + + ID + ++ ++
Sbjct: 148 CNSLMRGYCSQGKIDKVRKIFHLMVSKGL-KPDVYSYSIFINGYCKVEKIDEAMELFDEM 206
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ Y +A + ++ I+ + ++ F K +
Sbjct: 207 SHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNL 266
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++ L++F ++ KPDL+ Y I+++ + R +V D + + G+ PD +Y L
Sbjct: 267 DEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTAL 326
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++ L + + L FR+M E G P +Y L+ + + ++L ++M
Sbjct: 327 VDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEM 381
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ AL F+ + +P +I +N +L + R+ + +++ F M+ G+ + + +
Sbjct: 21 LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N + +D F + + G KPD++ +T LID R G E + L +M
Sbjct: 81 LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + SL+ GK+D IF M S
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVS 173
>gi|297839813|ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
Length = 832
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 14/285 (4%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLR---------DKNIFLPNAYNCVLVASAETNDIDL 51
M G + A V+ V ++Q + DK F+PN + + + ++D
Sbjct: 125 MVGGLKKPYMNASAVAKIVEVVQRWKWGPELETQLDKLQFVPNMVH-ITQSLKIVKEVDA 183
Query: 52 SFQILKDLLVSSRTLSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPE---SIIVVN 107
+ + + L SD CY D + EE+VQ +S S N
Sbjct: 184 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFGAYN 243
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
++I AK+ ++E A F + CK D TYN ++ + G + SM++
Sbjct: 244 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT 303
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ D +Y ++ +L K RLD F++M E ++P +++L+DS G+ G ++ S
Sbjct: 304 DSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS 363
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++++ +M+ RPS ++ SLID+ K GK+D A+ +++EM S
Sbjct: 364 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKS 408
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 116/239 (48%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
AYN V+ A+ ++++F K S + + Y N F+ + E
Sbjct: 240 GAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 299
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ + S II + AKS +++ A +F +K K +P ++ ++D +G+ GR
Sbjct: 300 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 359
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++ + + M+ G P + +L+++ K +LD L + EM +SG +P+ YT
Sbjct: 360 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 419
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+I+S ++G +E ++ +F DM++ P+ Y L++ G+VD AM I+ M ++
Sbjct: 420 IIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 478
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 91/170 (53%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S V + ++ + K+ +++ ++ ++ ++G +P + ++D + G+++ L +
Sbjct: 343 SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLW 402
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK++G P+F Y ++ + K +L++ + F++M ++G P TY+ L++ +
Sbjct: 403 DEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGS 462
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G ++ +++++N M +RP + Y SL+ L VD+A I EM +
Sbjct: 463 GQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 512
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 122/269 (45%), Gaps = 4/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L K+G + AA +L Q ++++ + P+ ++ ++ + + +D S ++ ++
Sbjct: 316 IPSLAKSGRLDAAFKLFQQMKERKL-RPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 374
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S+ + + ++ L +E+ + + + II + AKS ++E A+
Sbjct: 375 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 434
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ P TY+ +L++ G+V+ + + SM AG+ P SY +LL L
Sbjct: 435 SVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLL 494
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
R +D+ EM G D+ L+ + + +++ +L+ M I+ +
Sbjct: 495 ANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASVDLALKWLRFMGSSGIKTNN 553
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ R L ++ K G D A + E + S
Sbjct: 554 FIIRQLFESCMKNGLYDSARPLLETLVHS 582
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC +G + A+ L + +F PN YN ++ E I +F +L + +
Sbjct: 532 ISGLCVSGLLKVAIGLFHRMSRDGVF-PNTVTYNALINILVENRRIKYAFVVLNLMGRNG 590
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + + D + ++ + ++Q +++ N II + S AL
Sbjct: 591 LFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 650
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I D ++ CKPD +Y ++ ++ ++ F M + G+ P+ ++Y L++
Sbjct: 651 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 710
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +LD M SG +P++ TY LI + N + L M ++ I P++
Sbjct: 711 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 770
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ID L K G LA+ +F +M
Sbjct: 771 VTYTAMIDGLCKNGSTSLALEMFNKM 796
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 34/267 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ C +GN ++A+R+L +RD P+ ++
Sbjct: 634 NTIIKGYCDSGNTTSALRILDLMRDGGC-KPDEWS------------------------- 667
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YT F E+V + + +I + K +++ A
Sbjct: 668 --------YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 719
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ +H+K C+P++ TYN+++ L + + M E G+ P+ ++Y +++
Sbjct: 720 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 779
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K L L F +M E G P+LLTY++LI + G+ G +EE+ LF ++++ + P
Sbjct: 780 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 839
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I+ GKV+ A M
Sbjct: 840 EITYVKMIEAYIMSGKVEHAFNFLGRM 866
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 118/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK GNV+ A +++ + + + P+ Y +++ +D+D + Q+ +
Sbjct: 389 NAVINALCKDGNVADAETIMKKVFESEMS-PDTFTYTSMILGHCRKHDLDSALQVFNQMA 447
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y+ + + I E++ + I A E
Sbjct: 448 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 507
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F +K C+P++ TY ++ L G + + F M GV P+ ++YN L+
Sbjct: 508 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 567
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L + RR+ + MG +G+ +++TY +I + G+ ++++ + N+M Q+
Sbjct: 568 NILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 627
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y ++I G A+ I + M
Sbjct: 628 ANLVTYNTIIKGYCDSGNTTSALRILDLM 656
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++++ N +I A K + A I + + PD TY ++ R ++ L F
Sbjct: 384 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 443
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P+ ++Y+TL+N L R++ REM GI P T T I +
Sbjct: 444 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 503
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G E++ RLF DMK + P++Y Y +LI L G + +A+ +F M+
Sbjct: 504 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L Y+ +L L R+G +++ + M GV P+ + YN ++N L K + +
Sbjct: 350 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 409
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
++ ES + PD TYT++I R +++ +L++FN M ++ P+ Y +LI+ L G
Sbjct: 410 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 469
Query: 258 KVDLAMTIFEEM 269
+V+ A + EM
Sbjct: 470 RVNEAFDLIREM 481
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 131/284 (46%), Gaps = 33/284 (11%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCV--LVASAETNDIDLSFQILKDLLVSS 63
I LC +G V+ A L++ + I LP A+ C ++A + + ++++ D+ +
Sbjct: 462 INGLCDSGRVNEAFDLIREMILHGI-LPTAHTCTGPIIALCDMGCYEDAWRLFVDM--KN 518
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + YT A +++ C L+ + + + + N +I ++R+
Sbjct: 519 KGCEPNVYTYTA---LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
I+ A ++ + + +++TYN ++ ILG + ++N +M + G + ++
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN---NMLQRGHSANLVT 632
Query: 176 YNTLL-------NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
YNT++ N +R LDL M + G KPD +YT LI F + +E +
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDL-------MRDGGCKPDEWSYTELICGFCKISKMESAF 685
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LFN+M + P+ Y +LID K K+D A ++ E M S
Sbjct: 686 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 729
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 116/298 (38%), Gaps = 39/298 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G+ S A+ + + ++ LPN Y+ ++ A + ++ + + +L
Sbjct: 777 IDGLCKNGSTSLALEMFNKMIEQGC-LPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 835
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESII------------------- 104
Y A+IM+ F+ +++ ++
Sbjct: 836 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 895
Query: 105 ------VVNRIIFAFAKSRQ-----IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
VV F + + Q + L D ++ + L++ L GR
Sbjct: 896 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSN---LSTAGRWFE 952
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
N++L SM G+ PD +YN+LL +L ++R +DL + F+ M G + L Y
Sbjct: 953 ANELL---GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 1009
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LI + + +E+ F +M + P V LID L + G DL M M +
Sbjct: 1010 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMET 1067
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 27/292 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + A LL+ ++ ++ PN YN ++ + N+ + ++ K ++
Sbjct: 707 IDGYCKDEKLDTATSLLEHMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 765
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + L ++++ +++ + +I A + ++E+A
Sbjct: 766 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAE 825
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F ++ PD ITY +++ G+V N M +AG P +Y L+ L
Sbjct: 826 NLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885
Query: 184 RKI-----RRLDL-------CLIYFREMGESGIK----------PDL--LTYTALIDSFG 219
+ +RL C ++ + + P L AL+ +
Sbjct: 886 KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLS 945
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G E+ L M Q + P Y SL+ +L ++ VDLAM +F+ M++
Sbjct: 946 TAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 997
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 56/106 (52%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+ ++G+ +Y+ LL +L ++ + + M G++P+LL Y A+I++ + GN
Sbjct: 341 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 400
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ + + + ++ P + Y S+I + +D A+ +F +M
Sbjct: 401 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 446
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLL 60
N I+ K G + + RLL + + PN C ++ A N I+ ++ I+ +
Sbjct: 428 NTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 61 VSSRTLSSDCYTNFARAFI-MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ A+A+ + CT + I ++ ++ I+ + + ++
Sbjct: 488 SYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVL-------DILGRVGRVNDMLNEFASMKEAGVVPD 172
E+AL F +K L P+L +N ++ D+ G VG V D++ EF GV PD
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG-VGEVVDLMEEF------GVKPD 600
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++++TL+N + + C + +M E GI PD+ ++ L + R G E++ ++ N
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILN 660
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M++ +RP++ +Y +I G++ AM ++++M
Sbjct: 661 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 44/259 (16%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ I L+ S YT A LL I +V + I+ N II
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG------------------- 152
A ++S +++A+ IF+ +K CKP T+N ++ G++G
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 153 -----------------RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL-- 193
++ + N M+ GV PD +++NTL +I C
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG--STCTAE 515
Query: 194 -IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID- 251
+ M + +KP++ T +++ + G +EE+LR F MK+ + P+++V+ SLI
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 252 --NLKKMGKVDLAMTIFEE 268
N+ M V + + EE
Sbjct: 576 FLNINDMDGVGEVVDLMEE 594
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A IF+ + KP LITY ++ L R + +L+ + +++ G+ PD I +N +
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQ 238
+N + LD + F +M ESG KP T+ LI +G+ G +EES RL + M + +
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++P+ L+ K++ A I +M S
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 67/118 (56%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GR + + F ++ E G P I+Y TL+ L + + L ++ ++G+KPD + +
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
A+I++ +GN+++++++F MK+ +P+ + +LI K+GK++ + + + M
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S L+N L + R F + E G KP L+TYT L+ + R + L L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +++ ++P ++ ++I+ + G +D AM IFE+M S
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 143/337 (42%), Gaps = 70/337 (20%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C I C++G A R+++ L + +P+ YN ++ ++ +ID + Q+L+ +
Sbjct: 145 CTSLIRGFCRSGKTRKATRIMEILENSGA-VPDVITYNVLIGGYCKSGEIDKALQVLERM 203
Query: 60 LVSS--------------------------RTLSSDCYTNFARAFIMTD------DCTQL 87
V+ R + +CY + I+ + Q
Sbjct: 204 SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQA 263
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
+ ++E+ + ++ N +I K ++++A+ +++ C+P++IT+NI+L
Sbjct: 264 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRS 323
Query: 148 LGRVGR-------VNDMLNEFAS----------------------------MKEAGVVPD 172
+ GR + DML + S M + G +P+
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+SYN LL+ + +++D + Y M G PD++TY L+ + + G + ++ + N
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + P + Y ++ID L K+GK + A + EEM
Sbjct: 444 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEM 480
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 134/273 (49%), Gaps = 11/273 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I +CK G + A++ L ++ PN +N +L + T + ++L D+L
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGC-QPNVITHNIILRSMCSTGRWMDAERLLADML 341
Query: 61 ---VSSRTLSSDCYTNF-ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
S ++ + NF R ++ + + +E++ + + + N ++ F +
Sbjct: 342 RKGCSPSVVTFNILINFLCRKRLLG----RAIDVLEKMPKHGCMPNSLSYNPLLHGFCQE 397
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++++A+ + + C PD++TYN +L L + G+ + + + G P I+Y
Sbjct: 398 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITY 457
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NT+++ L K+ + + EM G+KPD++TY+ L+ G G ++E++++F+DM+
Sbjct: 458 NTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEG 517
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+PS Y +++ L K + A+ M
Sbjct: 518 LSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 550
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
R + + + L F+E ++ +I +I F +S + KA I + ++
Sbjct: 115 RKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAV 174
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD+ITYN+++ + G ++ L M V PD ++YNT+L +L +L +
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEV 231
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+ PD++TYT LI++ + ++++L ++M+++ +P + Y LI+ + K
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291
Query: 256 MGKVDLAMTIFEEM 269
G++D A+ M
Sbjct: 292 EGRLDEAIKFLNNM 305
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F + + ++E +V I+ N ++ A K + + A+ I + +
Sbjct: 387 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLS 446
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C P LITYN V+D L +VG+ M+ G+ PD I+Y+TLL L ++D
Sbjct: 447 SKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVD 506
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ F +M IKP +TY A++ + ++ M ++ +P+ Y LI
Sbjct: 507 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566
Query: 251 DNL 253
+ +
Sbjct: 567 EGI 569
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 182 NLRKIRR---LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+LRK+ R L+ L + M G PD++ T+LI F R+G ++ R+ ++
Sbjct: 113 HLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSG 172
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P + Y LI K G++D A+ + E M+
Sbjct: 173 AVPDVITYNVLIGGYCKSGEIDKALQVLERMS 204
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 5/147 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N + LCK G AAV +L L K + YN V+ + + + ++L+++
Sbjct: 423 NTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEM-- 480
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ L D Y+ R + + ++ ++ S + N I+ K++Q
Sbjct: 481 RRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 540
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLD 146
+A+ ++ CKP TY I+++
Sbjct: 541 SRAIDFLAYMVEKGCKPTKATYTILIE 567
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 11/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDID---LSFQILKDLL 60
+E+LCK + A+ ++ + + I P+A YN VL + ++ L F+ +
Sbjct: 16 VERLCKTKRIDDALATVEEMATRGI-KPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 74
Query: 61 VSSRTLSSDCYTN-FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ ++ + N +A+ + T +F E + P + N +I F K + +
Sbjct: 75 INPNVVTYNTLINGLCKAWRIE---TAYELFKEMAGKGYVPTEV-SYNTLIDGFCKKKDL 130
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A +FD + C P+++TY ++D L + G+V M + GV P+ +Y+ L
Sbjct: 131 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 190
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K+RR+D +M GI P ++TY L++S R +E++ +LF M Q++
Sbjct: 191 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 250
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y +L+ L ++D A ++ EM
Sbjct: 251 HPTVVTYNTLLRALCHHKQLDGAHRLYAEM 280
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+P + I+ K+++I+ AL + + KPD YN VL L + +V +
Sbjct: 5 APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 64
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M + + P+ ++YNTL+N L K R++ F+EM G P ++Y LID F
Sbjct: 65 LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ + +F+ M + P++ Y +LID L K GKV A + + M
Sbjct: 125 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM 175
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 119/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC+ V A L + + + I PN YN ++ + I+ ++++ K++
Sbjct: 48 NFVLSGLCQEEKVEEARLLFEKMVKQRIN-PNVVTYNTLINGLCKAWRIETAYELFKEMA 106
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y F D +++V+ +++ +I +KS +++
Sbjct: 107 GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQ 166
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + D + P++ TY+ ++D +V RV++ M G+ P ++YN LL
Sbjct: 167 AAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILL 226
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N+L + +L+ FR M + P ++TY L+ + ++ + RL+ +M +
Sbjct: 227 NSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCP 286
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +L L + GKV A + E+M
Sbjct: 287 PDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 3/241 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCKA + A L + + K ++P +YN ++ + D+ + + ++
Sbjct: 83 NTLINGLCKAWRIETAYELFKEMAGKG-YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 141
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S+ + YT + ++ +V+ ++ + +I F K R+++
Sbjct: 142 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 201
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + + + P ++TYNI+L+ L R ++ D F M + P ++YNTLL
Sbjct: 202 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 261
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L ++LD + EM G PD +TY L R G + E+ L MK +
Sbjct: 262 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 321
Query: 241 P 241
P
Sbjct: 322 P 322
>gi|302813417|ref|XP_002988394.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
gi|300143796|gb|EFJ10484.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
Length = 388
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 6/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ NV A +L+ + D P+ YN ++ + D + Q+++++
Sbjct: 87 NNVIASFCEVCNVRKAKGILELMIDSGC-KPDVVTYNTLISGLCKVRRADDALQLMREME 145
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T++ Y + T+ ++E++ + P S+ N +I +SR++E
Sbjct: 146 PAPNTIT---YNTVINGLWRSRKDTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREME 202
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ +F +++ KC+ D +T+ ++D R R+ D M AG+ D SY LL
Sbjct: 203 KAVDVFLYMRKKKCETDEVTFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLL 262
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L F M + G P L++Y L+ + +E +L LF +M++++I+
Sbjct: 263 NALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQ 322
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
P + Y ++I L ++D A+ +F +
Sbjct: 323 PDVVSYTTVIKGLCAARRIDEAIDLFRD 350
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
I G P+++ +N V++ R G ++ L M++AG PD ++YNTL++ K+ R
Sbjct: 2 ILGGAVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCDPDEVTYNTLIDVFHKLER 61
Query: 189 LDLCLIYFREMGESGIKPDLL--TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
D +M +SGI+P ++ TY +I SF N+ ++ + M +P + Y
Sbjct: 62 FDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTY 121
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNSS 272
+LI L K+ + D A+ + EM +
Sbjct: 122 NTLISGLCKVRRADDALQLMREMEPA 147
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 89/176 (50%), Gaps = 5/176 (2%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
A ++++ N ++ FA++ ++ AL ++ C PD +TYN ++D+ ++ R +
Sbjct: 6 AVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCDPDEVTYNTLIDVFHKLERFDSA 65
Query: 158 LNEFASMKEAGVVPDFI--SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
M ++G+ P + +YN ++ + ++ + M +SG KPD++TY LI
Sbjct: 66 RELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYNTLI 125
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +++L+L M++ + P+ Y ++I+ L + K A + +EM S
Sbjct: 126 SGLCKVRRADDALQL---MREMEPAPNTITYNTVINGLWRSRKDTEAQALLDEMIS 178
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 121/245 (49%), Gaps = 7/245 (2%)
Query: 31 FLPN--AYNCVLVASAETN-DIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQL 87
F+P +YN VL A+ + +I + + K++L S + + Y R F +
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA--LLIFDHIKGLKCKPDLITYNIVL 145
L +++ +++ N +I + K R+I+ LL +KGL+ P+LI+YN+V+
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE--PNLISYNVVI 282
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ L R GR+ ++ M G D ++YNTL+ K L+ EM G+
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P ++TYT+LI S + GN+ ++ + M+ + + P+ Y +L+D + G ++ A +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 266 FEEMN 270
EMN
Sbjct: 403 LREMN 407
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 123/259 (47%), Gaps = 3/259 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK GN A+ ++ + ++ P+ Y ++ + + +++ + + L +
Sbjct: 314 NTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V + YT F + + E+ S++ N +I + ++E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + + +K PD+++Y+ VL R V++ L M E G+ PD I+Y++L+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ RR + EM G+ PD TYTALI+++ G++E++L+L N+M ++ +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 241 PSIYVYRSLIDNLKKMGKV 259
P + Y LI+ L K +
Sbjct: 553 PDVVTYSVLINGLNKQSRT 571
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 129/270 (47%), Gaps = 5/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDI-DLSFQILKDL 59
N I+ CK + +LL+S+ K + PN +YN V+ + ++SF +L ++
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGL-EPNLISYNVVINGLCREGRMKEVSF-VLTEM 301
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+L Y + + + Q L+ E+++ S+I +I + K+ +
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A+ D ++ P+ TY ++D + G +N+ M + G P ++YN L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N +++ + +M E G+ PD+++Y+ ++ F R+ +++E+LR+ +M ++ I
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P Y SLI + + A ++EEM
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 117/249 (46%), Gaps = 3/249 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CKAGN++ A+ L +R + + PN Y ++ ++ ++ ++++L+++ +
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGL-CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ S Y +T + +E++ + ++ + ++ F +S +++AL
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + KPD ITY+ ++ R + + + M G+ PD +Y L+N
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
L+ L EM E G+ PD++TY+ LI+ + E+ RL + ++ PS
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 244 YVYRSLIDN 252
Y +LI+N
Sbjct: 591 VTYHTLIEN 599
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR-VNDMLNEFAS 163
V + ++ ++++ I+KAL I + P +++YN VLD R R ++ N F
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E+ V P+ +YN L+ +D+ L F +M G P+++TY LID + +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I++ +L M + + P++ Y +I+ L + G++ + EMN
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/276 (17%), Positives = 107/276 (38%), Gaps = 53/276 (19%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G + A+ +L+ +++K + P+ +Y+ VL + D+D + ++ ++++
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLS-PDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ + F + EE++++ P +I A+ +E
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND------------------------ 156
KAL + + + PD++TY+++++ L + R +
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 157 ----------------------MLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
M+ E F SM PD +YN +++ + +
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
++EM +SG +T AL+ + + G + E
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 79/136 (58%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C PD++TYN V+ + G++ N + M + G VPD +++N+++N L K R +D
Sbjct: 112 CSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAE 171
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+ R+M ++G+ P+ +TYT++I + G EE+ ++F +M + + P I + S +D+L
Sbjct: 172 LLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSL 231
Query: 254 KKMGKVDLAMTIFEEM 269
K G+ A IF M
Sbjct: 232 CKHGRSKEAAEIFYSM 247
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 4/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC AV++L + +P+A Y VL + N + +L+ +
Sbjct: 47 NTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMA 106
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S D Y F + E++Q ++ N II A K+R
Sbjct: 107 KEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARA 166
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ A L+ + P+ +TY ++ +GR + F M G++PD +S+N+
Sbjct: 167 VDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNS 226
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++L K R F M G +P+++TY L+ + G + + FN MK
Sbjct: 227 FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDG 286
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I + V+ LID K G +D AM I EM
Sbjct: 287 IVANCLVFTILIDAYAKRGMMDEAMLILSEMQG 319
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 4/274 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I K G + A L + + F+P+ +N ++ A + +D + +L+ ++
Sbjct: 120 NTVIHGFFKEGKIGKACNLYHEMMQQG-FVPDVVTHNSIINALCKARAVDNAELLLRQMV 178
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT+ + + E+ I+ N + + K + +
Sbjct: 179 DNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSK 238
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IF + +P+++TY I+L G DM++ F +MK G+V + + + L+
Sbjct: 239 EAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D ++ EM G+ PD+ TY+ LI + R G + +++ FN M ++
Sbjct: 299 DAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQ 358
Query: 241 PSIYVYRSLIDNLKKMGK-VDLAMTIFEEMNSSL 273
P+ VY SLI G V ++E MN+ +
Sbjct: 359 PNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGI 392
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y + + F D + + E++ P +I N I+ + K ++ A IFD +
Sbjct: 364 YHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLV 423
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K + + D+I +N ++D VG + + +M AG+ PD +YNTL+N K R+
Sbjct: 424 KDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRI 483
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
D L FREM + IKP +TY ++D R G + ++ ++M S+ Y +
Sbjct: 484 DDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNII 543
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+ L + D A+ +F+++
Sbjct: 544 LKGLCRNNCTDEAIVMFQKL 563
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 8/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDLL 60
I+ C G++ A L+ + + I PN +N + + D F ++KD+
Sbjct: 368 IQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIG 427
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + + + + + + ++ ++ N ++ + KS +I+
Sbjct: 428 ERSDIIM---FNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
L +F + K KP +TYNI+LD L R GR M G +YN +L
Sbjct: 485 DGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIIL 544
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + D ++ F+++ +K ++ T +I+S EE+ LF+ + +
Sbjct: 545 KGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLV 604
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ Y +I NL K G V+ A +F M S
Sbjct: 605 PNASTYGIMIRNLLKEGSVEEADNMFSSMEKS 636
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/261 (18%), Positives = 109/261 (41%), Gaps = 7/261 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRD----KNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N + +CK G V A + ++D +I + +N ++ ++ +F +L
Sbjct: 401 NSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIM---FNTLIDGYCLVGEMGKAFSVLDA 457
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + + Y + + L E+ + + N I+ ++ +
Sbjct: 458 MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGR 517
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A + + G L TYNI+L L R ++ + F + V + + NT
Sbjct: 518 TVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNT 577
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++N++ ++R + F + +SG+ P+ TY +I + + G++EE+ +F+ M++
Sbjct: 578 MINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637
Query: 239 IRPSIYVYRSLIDNLKKMGKV 259
P + I L + G++
Sbjct: 638 CAPCSRLLNDTIRTLLEKGEI 658
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 42/174 (24%)
Query: 136 PDLITYNIVLD-------------ILGRVGRVNDMLNEFAS------------------- 163
P + TY +V++ GR+ R ++ A+
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 164 ----MKEAGVVPDFISYNTLLNNL----RKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
M E G VPD SY +L L R + LDL + +E E PD++TY +I
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKE--EGVCSPDVVTYNTVI 123
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F + G I ++ L+++M QQ P + + S+I+ L K VD A + +M
Sbjct: 124 HGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQM 177
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 98/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 127 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +N+ +M+ +GV PD +Y+ L+N L K ++D F EM + G+ P+ +
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGV 246
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEM 306
Query: 270 N 270
+
Sbjct: 307 S 307
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L +NI++ + G + + F ++ + G+ P +S+NTL+N K+ L+ +
Sbjct: 140 LYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKK 199
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG++PD+ TY+ LI+ + +++ LF++M + P+ + +LID K G
Sbjct: 200 AMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNG 259
Query: 258 KVDLAMTIFEEM-NSSLS 274
+VDLAM I+++M + SLS
Sbjct: 260 RVDLAMEIYKQMLSQSLS 277
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ CK G + RL QS+ D K P+ ++N ++ + D++ F++ K +
Sbjct: 147 MHSFCKEGEI----RLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQ 202
Query: 61 VSSRTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
S + D YT + M DD +L +E++ + + +I
Sbjct: 203 ASG--VQPDVYTYSVLINGLCKESKM-DDXNELF---DEMLDXGLVPNGVTFTTLIDGHC 256
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVP 171
K+ +++ A+ I+ + PDL+TYN ++ L + G + D+++E SMK G+ P
Sbjct: 257 KNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEM-SMK--GLKP 313
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y TL++ K L+ Y M + I+ D + YTALI + G ++ ++
Sbjct: 314 DKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 373
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+M ++P I Y +I+ K G V + +EM
Sbjct: 374 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 412
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 216 LINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 275
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD ++YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 276 LSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 335
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 336 EYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 378
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
I+ + + Q SP+ ++ N +I+ K +++A + D + KPD ITY ++D
Sbjct: 267 IYKQMLSQSLSPD-LVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGS 325
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G + M + + D ++Y L++ L + R REM G+KP++
Sbjct: 326 CKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 385
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
TYT +I+ F + G++ +L +M++ PS+ Y L++
Sbjct: 386 GTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + II A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 70 IYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 129
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + G++P ++++ L++ + + G
Sbjct: 130 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 189
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ E RL M+ ++P +Y Y LI+ L K K+D +F+EM
Sbjct: 190 DLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEM 236
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 64/138 (46%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 67 RSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 126
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 127 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G ++ + + M +S
Sbjct: 187 KLGDLNEXFRLKKAMQAS 204
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LC+ GNV AV + + + D+N Y+ ++ ID + +L ++ V
Sbjct: 182 IKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGT 241
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + A D ++ ++ + + + N ++ +++KA+
Sbjct: 242 FPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMS 301
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + + KC P+ IT+ ++D + GR D + S++E G + SY++L++ L
Sbjct: 302 LLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLF 361
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K + + + ++EM E G KP+ + Y+ALID R G +E+ +MK + P+ +
Sbjct: 362 KEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSF 421
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SL+ + G + A+ +++EM
Sbjct: 422 TYSSLMWGYFEAGDIHKAILVWKEM 446
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 128/273 (46%), Gaps = 11/273 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G++S A +L+ ++ K +PN YN ++ +D + +L + +
Sbjct: 249 NVLISALCKKGDLSRASKLVDNMFLKGC-VPNEVTYNSLVHGLCLKGKLDKAMSLL-NRM 306
Query: 61 VSSRTLSSD-CYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
V+++ + +D + F+ D ++L+ +EE + S + +I K
Sbjct: 307 VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFS---YSSLISGLFKE 363
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ E + ++ + CKP+ I Y+ ++D L R G+ ++ MK G P+ +Y
Sbjct: 364 GKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTY 423
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++L+ + + ++ ++EM ++ + Y+ LI+ + G ++E+L ++ M
Sbjct: 424 SSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLS 483
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I+ + Y S+I V+ M +F +M
Sbjct: 484 RGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQM 516
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+P+ +++N+V+ L RVG V+ + F M + V D +Y+TL++ L R+D +
Sbjct: 172 QPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVS 231
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
EM G P+ + + LI + + G++ + +L ++M + P+ Y SL+ L
Sbjct: 232 LLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLC 291
Query: 255 KMGKVDLAMTIFEEM 269
GK+D AM++ M
Sbjct: 292 LKGKLDKAMSLLNRM 306
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 11/186 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ G A L +++K PN+ Y+ ++ E DI + + K++ +
Sbjct: 392 IDGLCREGKPDEAKEYLIEMKNKG-HTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDND 450
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
CY+ + LI ++++ ++ + +I F ++ +E+ +
Sbjct: 451 CNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGM 510
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+F+ + K +PD++TYNI+L+ V R D+LN +M + G PDFI+ +
Sbjct: 511 KLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILN---TMLDQGCDPDFITCDI 567
Query: 179 LLNNLR 184
L LR
Sbjct: 568 FLKTLR 573
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 112 AFAKSRQIEKALLIFDHIKG-LKCKPDLITYNIVLDILGRVGRVNDMLNEFA-----SMK 165
A+ K+ +KAL +F + CK + ++N VL+++ + G D+ EF S
Sbjct: 109 AYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCF-DLALEFYNHVIDSNS 167
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ + P+ +S+N ++ L ++ +D + FR M + D TY+ L+ G I+
Sbjct: 168 FSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRID 227
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E++ L ++M+ + P+ + LI L K G + A + + M
Sbjct: 228 EAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNM 271
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/242 (16%), Positives = 109/242 (45%), Gaps = 9/242 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
++ K G VR+L SL +K N F +Y+ ++ + + Q+ K+++
Sbjct: 322 VDGFVKHGRALDGVRVLVSLEEKGYRGNEF---SYSSLISGLFKEGKGEHGMQLWKEMVE 378
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ Y+ + ++ E+ + + +++ + ++ I K
Sbjct: 379 KGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHK 438
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+L++ + C + Y+I+++ L + G++ + L + M G+ D ++Y+++++
Sbjct: 439 AILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIH 498
Query: 182 NLRKIRRLDLCLIYFREM--GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ ++ + F +M ++PD++TY L+++F ++ ++ + N M Q
Sbjct: 499 GFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGC 558
Query: 240 RP 241
P
Sbjct: 559 DP 560
>gi|341606825|gb|AEK83515.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 206
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 15 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 74
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 75 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 134
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKV+ AMT+F+ M
Sbjct: 135 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 179
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 37 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 96
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 97 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 156
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G + E++ LF M++++ ++Y Y LI + K
Sbjct: 157 NALIDALTKHGKVNEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 201
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 7 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 64
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 65 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSL 124
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 125 IDGLGKAGRIDEAERLFEEMSE 146
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 1 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 59
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 60 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 107
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID K
Sbjct: 1 YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 60
Query: 256 MGKVDLAMTIFEEM 269
G V+ A+ + M
Sbjct: 61 SGSVEDAIRLLHRM 74
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 92/164 (56%), Gaps = 6/164 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMK 165
+I ++R+++KA +FD + C P+ +TY+ +++ L GR+G DML E M
Sbjct: 238 LILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEE---MT 294
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
E G+ P +Y +++L I R+D + R MG+ G P + TYTA+I R G +E
Sbjct: 295 EKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKME 354
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +++ M ++ + P+ Y +LI+ L G+ +A+ IF+ M
Sbjct: 355 LAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWM 398
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 119/267 (44%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I L +AG + A+ + + + + +PN YN ++ ++ +I D +
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGL-VPNTVTYNALINELCTEGRFGIALKIF-DWMEGH 401
Query: 64 RTLS-SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
TL+ + Y + DD + ++ ++++ +++ N +I K + A
Sbjct: 402 GTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNA 461
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+K C+PD TY ++ + G+++ + F M + G+ P+ +Y +++
Sbjct: 462 TRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDG 521
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K ++D+ L F M E+G + TY A+I + E+ + M +Q ++P+
Sbjct: 522 YCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPN 581
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI+ L K +LA IF EM
Sbjct: 582 TITYTSLINGLCKNTATNLAFKIFHEM 608
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
I LC G + A+ +L+ + +K I P Y + S+ + +D + +++ +
Sbjct: 274 INGLCNEGRIGEAMDMLEEMTEKGI-EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKG 332
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ S YT + ++++ + + N +I + AL
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIAL 392
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IFD ++G + TYN ++ L + + + F M + G P ++YNTL+
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN 452
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K L+ + M ES +PD TY LI F + G ++ + F +M + I P+
Sbjct: 453 LKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQ 512
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y ++ID K GK+D+A+++FE M
Sbjct: 513 WTYTAMIDGYCKEGKIDVALSLFERM 538
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 17/274 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I +LC G A+++ + L NA YN ++ +DI+ + + +L
Sbjct: 376 NALINELCTEGRFGIALKIFDWMEGHGT-LANAQTYNQIIKGLFGMDDIEKAMVVFNKML 434
Query: 61 VSSRTLSSDCYT-----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+ + Y N R ++ ++ T+ L ++E P+ +I F K
Sbjct: 435 KDGPSPTVVTYNTLIVENLKRGYL--NNATRFLYMMKE--SNCEPDERTYC-ELISGFCK 489
Query: 116 SRQIEKALLIFDHIKGLKC--KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+++ A F + LKC P+ TY ++D + G+++ L+ F M+E G
Sbjct: 490 GGKLDSATSFFYEM--LKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASI 547
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+YN +++ L K R + +M E G++P+ +TYT+LI+ + + ++F++
Sbjct: 548 ETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE 607
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
M+++ P+ + Y SLI L + GKVD A + E
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE 641
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ K + A ++ I KP L+T+N +++IL + G+V + + F + +
Sbjct: 166 NTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQ 225
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ PD +Y +L+ + R+LD F M + G P+ +TY+ LI+ G I E
Sbjct: 226 FDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGE 285
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ + +M ++ I P++Y Y I +L +G+VD A+ + M
Sbjct: 286 AMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMG 329
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 113/256 (44%), Gaps = 4/256 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G V AV + + ++ P+A Y +++ +D +F++ ++
Sbjct: 201 NTMINILCKKGKVQEAVLVFNKIFQFDL-CPDAFTYTSLILGHCRNRKLDKAFEVFDRMV 259
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S Y+ + + +EE+ + ++ I + +++
Sbjct: 260 KDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVD 319
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + + C P + TY ++ L R G++ + + M + G+VP+ ++YN L+
Sbjct: 320 DAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALI 379
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L R + L F M G + TY +I +IE+++ +FN M +
Sbjct: 380 NELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS 439
Query: 241 PSIYVYRSLI-DNLKK 255
P++ Y +LI +NLK+
Sbjct: 440 PTVVTYNTLIVENLKR 455
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 5/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK G + A+ L + + + YN ++ ++ N + + +
Sbjct: 519 IDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGL 578
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
++ YT+ E+ + + +I+ + +++ A
Sbjct: 579 QPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA-- 636
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + C+P + TY+ ++ L R GR N+ +MKE G+ P Y +LL
Sbjct: 637 --ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHC 694
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K ++D L F M G +P L Y LI + EE+L +F + ++Q +
Sbjct: 695 KSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLI 754
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
V+ L+D L + G DL M M S
Sbjct: 755 VWTVLVDGLLQEGDSDLCMKFLYLMES 781
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L ++N +L LG+ V N +A + +GV P +++NT++N L K ++ ++ F
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
++ + + PD TYT+LI R ++++ +F+ M + P+ Y +LI+ L G
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281
Query: 258 KVDLAMTIFEEM 269
++ AM + EEM
Sbjct: 282 RIGEAMDMLEEM 293
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A ++ + KN LPNA Y ++ + +D + ++ ++
Sbjct: 589 INGLCKNTATNLAFKIFHEMEKKNC-LPNAHTYTSLIYGLCQEGKVDAAERLTEN----G 643
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ D Y+ + +E + + S+ + ++ A KS +++ AL
Sbjct: 644 CEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCAL 703
Query: 124 LIFD--HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
IF+ +KG + P L Y +++ L V R + LN F S+ + D I + L++
Sbjct: 704 EIFNLMAVKGFQ--PHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVD 761
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
L + DLC+ + M P L TY L + G
Sbjct: 762 GLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVG 802
>gi|341605773|gb|AEK82989.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 90/165 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRM 183
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALXKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLL 60
N I+ K G + + RLL + + PN C ++ A N I+ ++ I+ +
Sbjct: 428 NTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 61 VSSRTLSSDCYTNFARAFI-MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ A+A+ + CT + I ++ ++ I+ + + ++
Sbjct: 488 SYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVL-------DILGRVGRVNDMLNEFASMKEAGVVPD 172
E+AL F +K L P+L +N ++ D+ G VG V D++ EF GV PD
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG-VGEVVDLMEEF------GVKPD 600
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++++TL+N + + C + +M E GI PD+ ++ L + R G E++ ++ N
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 660
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M++ +RP++ +Y +I G++ AM ++++M
Sbjct: 661 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 44/259 (16%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ I L+ S YT A LL I +V + I+ N II
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG------------------- 152
A ++S +++A+ IF+ +K CKP T+N ++ G++G
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 153 -----------------RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL-- 193
++ + N M+ GV PD +++NTL +I C
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG--STCTAE 515
Query: 194 -IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID- 251
+ M + +KP++ T +++ + G +EE+LR F MK+ + P+++V+ SLI
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 252 --NLKKMGKVDLAMTIFEE 268
N+ M V + + EE
Sbjct: 576 FLNINDMDGVGEVVDLMEE 594
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A IF+ + KP LITY ++ L R + +L+ + +++ G+ PD I +N +
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQ 238
+N + LD + F +M ESG KP T+ LI +G+ G +EES RL + M + +
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++P+ L+ K++ A I +M S
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 67/118 (56%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GR + + F ++ E G P I+Y TL+ L + + L ++ ++G+KPD + +
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
A+I++ +GN+++++++F MK+ +P+ + +LI K+GK++ + + + M
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S L+N L + R F + E G KP L+TYT L+ + R + L L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +++ ++P ++ ++I+ + G +D AM IFE+M S
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 99/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +N+ +M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L +NI++ + G + + F ++ + G+ P +S+NTL+N K+ L+
Sbjct: 136 LYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG++PD+ TY+ LI+ + ++++ LF++M + P+ + +LID K G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 258 KVDLAMTIFEEM-NSSLS 274
+VDLAM I+++M + SLS
Sbjct: 256 RVDLAMEIYKQMLSQSLS 273
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 27/279 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ CK G + RL QS+ D K P+ ++N ++ + D++ F+ LK+ +
Sbjct: 143 MHSFCKEGEI----RLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFR-LKNAM 197
Query: 61 VSSRTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
+S + D YT + M DD +L +E++ + + +I
Sbjct: 198 QAS-GVQPDVYTYSVLINGLCKESKM-DDANELF---DEMLDNGLVPNGVTFTTLIDGHC 252
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVP 171
K+ +++ A+ I+ + PDLITYN ++ L + G + D+++E SMK G+ P
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMK--GLKP 309
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y TL++ K L+ Y + M + I+ D + YTALI + G ++ ++
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+M ++ I Y +I+ K G V + +EM
Sbjct: 370 REMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + D N +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+K ++ TYT +I+ F + G++ +L +M++ PS+
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
VP F + +L +L K++ L ++ E E G L + L+ SF + G I +
Sbjct: 99 VP-FDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQS 157
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+F+ + + +RPS+ + +L++ K+G ++ + M +S
Sbjct: 158 VFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLL 60
N I+ K G + + RLL + + PN C ++ A N I+ ++ I+ +
Sbjct: 451 NTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 510
Query: 61 VSSRTLSSDCYTNFARAFI-MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ A+A+ + CT + I ++ ++ I+ + + ++
Sbjct: 511 SYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 570
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVL-------DILGRVGRVNDMLNEFASMKEAGVVPD 172
E+AL F +K L P+L +N ++ D+ G VG V D++ EF GV PD
Sbjct: 571 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG-VGEVVDLMEEF------GVKPD 623
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
++++TL+N + + C + +M E GI PD+ ++ L + R G E++ ++ N
Sbjct: 624 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 683
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M++ +RP++ +Y +I G++ AM ++++M
Sbjct: 684 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 720
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 44/259 (16%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
+ I L+ S YT A LL I +V + I+ N II
Sbjct: 361 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 420
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG------------------- 152
A ++S +++A+ IF+ +K CKP T+N ++ G++G
Sbjct: 421 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 480
Query: 153 -----------------RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL-- 193
++ + N M+ GV PD +++NTL +I C
Sbjct: 481 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG--STCTAE 538
Query: 194 -IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID- 251
+ M + +KP++ T +++ + G +EE+LR F MK+ + P+++V+ SLI
Sbjct: 539 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 598
Query: 252 --NLKKMGKVDLAMTIFEE 268
N+ M V + + EE
Sbjct: 599 FLNINDMDGVGEVVDLMEE 617
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A IF+ + KP LITY ++ L R + +L+ + +++ G+ PD I +N +
Sbjct: 359 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 418
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQ 238
+N + LD + F +M ESG KP T+ LI +G+ G +EES RL + M + +
Sbjct: 419 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 478
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++P+ L+ K++ A I +M S
Sbjct: 479 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 511
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 67/118 (56%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GR + + F ++ E G P I+Y TL+ L + + L ++ ++G+KPD + +
Sbjct: 356 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 415
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
A+I++ +GN+++++++F MK+ +P+ + +LI K+GK++ + + + M
Sbjct: 416 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 473
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S L+N L + R F + E G KP L+TYT L+ + R + L L
Sbjct: 341 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 400
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +++ ++P ++ ++I+ + G +D AM IFE+M S
Sbjct: 401 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKES 441
>gi|341606827|gb|AEK83516.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 207
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 135
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKV+ AMT+F+ M
Sbjct: 136 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 180
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 38 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 97
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 98 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 157
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G + E++ LF M++++ ++Y Y LI + K
Sbjct: 158 NALIDALTKHGKVNEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 8 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 65
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 66 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSL 125
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 126 IDGLGKAGRIDEAERLFEEMSE 147
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 2 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 108
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID K
Sbjct: 2 YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61
Query: 256 MGKVDLAMTIFEEM 269
G V+ A+ + M
Sbjct: 62 SGSVEDAIRLLHRM 75
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 29/279 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLV----------ASAETNDIDLSF 53
I+ LCK V+ A+ + ++ K I PN YN ++ ASA N++ +S
Sbjct: 269 IDSLCKDRRVNEALDIFSYMKAKGI-SPNIFTYNSLIQGLCNFSRWREASAMLNEM-MSL 326
Query: 54 QILKDLLVSSRTLSSDCYTN---FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
I+ +++ S ++ C AR + T + ++ +++ + ++
Sbjct: 327 NIMPNIVTFSLLINIFCKEGNVFEARGVLKT------------MTEMGVEPNVVTYSSLM 374
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++ ++ +A +FD + CKPD+ +YNI+++ + R+ + F M G+
Sbjct: 375 NGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 434
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD +SYNTL++ L ++ RL F+ M +G PDL TY+ L+D F + G + ++ RL
Sbjct: 435 PDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 494
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M+ ++P++ +Y LID + K + A +F E+
Sbjct: 495 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 533
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 139/282 (49%), Gaps = 6/282 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC A +L + NI +PN ++ ++ + ++ + +LK +
Sbjct: 301 NSLIQGLCNFSRWREASAMLNEMMSLNI-MPNIVTFSLLINIFCKEGNVFEARGVLKTMT 359
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ + + + + + ++ + N +I + K+++I
Sbjct: 360 EMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 419
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + PD+++YN ++D L ++GR+ + + F +M G +PD +Y+ LL
Sbjct: 420 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 479
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K L FR M + +KP+++ Y LID+ ++ N++E+ +LF+++ Q ++
Sbjct: 480 DGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQ 539
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
P++ +Y ++I+ L K G +D A+ F M D P +F
Sbjct: 540 PNVQIYTTIINGLCKEGLLDEALEAFRNME---EDGCPPNEF 578
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 1/173 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP++ ++ +I F + ++++ + I L + ++T+N +++ L +VG+ +
Sbjct: 154 SPDTY-TLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAV 212
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M G PD +Y T++N L KI FR+MGE+G +PD++TY+ +IDS
Sbjct: 213 ELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSL 272
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + E+L +F+ MK + I P+I+ Y SLI L + A + EM S
Sbjct: 273 CKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS 325
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+DL F +L ++ L+ + Q + +++V +
Sbjct: 173 VDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTT 232
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K + A +F + C+PD++TY+ ++D L + RVN+ L+ F+ MK G
Sbjct: 233 IINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 292
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P+ +YN+L+ L R EM I P+++T++ LI+ F + GN+ E+
Sbjct: 293 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 352
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + + P++ Y SL++ +V A +F+ M
Sbjct: 353 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 37/279 (13%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+N ++ + + ++ D++ YT + ++
Sbjct: 194 TFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKM 253
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ ++ + II + K R++ +AL IF ++K P++ TYN ++ L R
Sbjct: 254 GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRW 313
Query: 155 ND---MLNEFAS--------------------------------MKEAGVVPDFISYNTL 179
+ MLNE S M E GV P+ ++Y++L
Sbjct: 314 REASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSL 373
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N + F M G KPD+ +Y LI+ + + I E+ +LFN+M Q +
Sbjct: 374 MNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 433
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
P I Y +LID L ++G++ A +F+ M N +L DL
Sbjct: 434 TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 472
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA-SMKEAGVVPDFIS 175
R I+ AL F+H+ K +P +I +N +L + ++ +D + + M+ AG+ PD +
Sbjct: 100 RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+ L+N +++R+DL ++ + G++ ++T+ LI+ + G +++ LF+DM
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +P ++ Y ++I+ L K+G+ A +F +M +
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA 256
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 126/271 (46%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I CK GNV A +L+++ + + PN V+ S+ N L ++++ +
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGV-EPN----VVTYSSLMNGYSLQAEVVEARKLFDVM 393
Query: 66 LSSDCYTN-FARAFIMTDDCTQLLI------FIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ C + F+ ++ C I F E + Q +P+ I+ N +I + +
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD-IVSYNTLIDGLCQLGR 452
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A +F ++ PDL TY+I+LD + G + F +M+ + P+ + YN
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ + K R L F E+ G++P++ YT +I+ + G ++E+L F +M++
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ + Y +I + A+ + EM
Sbjct: 573 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 603
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 64/126 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F K + KA +F ++ KP+++ YNI++D + + + + F+ + G+ P
Sbjct: 481 GFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQP 540
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ Y T++N L K LD L FR M E G P+ +Y +I F + + +++L
Sbjct: 541 NVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLI 600
Query: 232 NDMKQQ 237
+M+++
Sbjct: 601 GEMREK 606
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY CKA + A +L + + + P+ +YN ++ + + + + K++L
Sbjct: 410 NGY----CKAKRIGEAKQLFNEMIHQGL-TPDIVSYNTLIDGLCQLGRLREAHDLFKNML 464
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y+ F + + ++++ N +I A KSR ++
Sbjct: 465 TNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLK 524
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F + +P++ Y +++ L + G +++ L F +M+E G P+ SYN ++
Sbjct: 525 EARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVII 584
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ + + EM E G D+ T
Sbjct: 585 RGFLQHKDESRAVQLIGEMREKGFVADVAT 614
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I L + G VS A L + + + +P+ Y ++ A + +D + +L+ ++
Sbjct: 231 NTVIHGLFREGEVSKACNLFHEMMQQGV-VPDVVTYTSIIDALCKARAMDKAELVLRQMI 289
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + ++ + E+ +I+ N + + K + +
Sbjct: 290 SNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSK 349
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A FD + KP+L+TY+++L G DMLN F SM+ G+V D +N ++
Sbjct: 350 EAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVI 409
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D ++ F +M E G+ PD TY +I +F R G + +++ FN M ++
Sbjct: 410 DAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLK 469
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P VY SLI G + A + EM S
Sbjct: 470 PEGIVYHSLIQGFCMHGNLVKAKELVSEMMS 500
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDL 138
+DD LL+ + ++ I N ++ + + ++AL + + K C P++
Sbjct: 170 SDDVVNLLL--HRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNV 227
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+TYN V+ L R G V+ N F M + GVVPD ++Y ++++ L K R +D + R+
Sbjct: 228 VTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQ 287
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M +G +P+ +TY +I + +G +E+ +F +M Q + P+I S + +L K GK
Sbjct: 288 MISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGK 347
Query: 259 VDLAMTIFEEM 269
A F+ M
Sbjct: 348 SKEAAEFFDSM 358
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 132/267 (49%), Gaps = 8/267 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKA + A +L+ + N F PN YNC++ + + + + +++ +S
Sbjct: 269 IDALCKARAMDKAELVLRQMIS-NGFQPNKVTYNCMIHGYSISGQWKETAGMFREM--TS 325
Query: 64 RTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ L + T ++ + + F + + +++ + ++ +A
Sbjct: 326 QGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVD 385
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L +F+ ++G D +NIV+D G+ G +++ + F M+E GV+PD +Y ++
Sbjct: 386 MLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIA 445
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI-R 240
++ RL + F +M G+KP+ + Y +LI F GN+ ++ L ++M + I R
Sbjct: 446 AFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPR 505
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE 267
P+I + S+I++L K G+V A IF+
Sbjct: 506 PNIVFFNSIINSLCKEGRVVEAHDIFD 532
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 125/269 (46%), Gaps = 4/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K G + + + ++++ + +P+A Y V+ A + + + ++
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGV-IPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMG 467
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKA 122
Y + + F M + + + E++ P +I+ N II + K ++ +A
Sbjct: 468 LKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEA 527
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
IFD + + +PD+IT+N ++D G VG++ +M AG+ PD +SYNTL++
Sbjct: 528 HDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDG 587
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ R+D LI F EM G+KP +TY ++ G + ++ ++M +
Sbjct: 588 YCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I ++ L + D A+ +F+++ +
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIAMFKKLGA 676
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 124/308 (40%), Gaps = 74/308 (24%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
CN Y+ LCK G A S+ K PN Y+ +L A
Sbjct: 335 CNSYMSSLCKHGKSKEAAEFFDSMAAKG-HKPNLVTYSVLLHGYA--------------- 378
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ C+ D L +E +A V N +I A+ K +
Sbjct: 379 -------TEGCFV----------DMLNLFNSMEGNGIVADQR---VFNIVIDAYGKRGMM 418
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++ +LIF ++ PD TY IV+ R+GR+ D +++F M G+ P+ I Y++L
Sbjct: 419 DETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSL 478
Query: 180 L------NNLRKIRRL----------DLCLIYFREMGES--------------------G 203
+ NL K + L +++F + S G
Sbjct: 479 IQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIG 538
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+PD++T+ +LID +G G IE++ + + M I P + Y +LID + G++D +
Sbjct: 539 ERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGL 598
Query: 264 TIFEEMNS 271
+F EM S
Sbjct: 599 ILFGEMLS 606
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 8/182 (4%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
++A P ++ N ++ ++R+ +F K D+I +I+L L R +
Sbjct: 113 RVALP-TVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSD 171
Query: 156 DMLNEF-ASMKEAGVVPDFISYNTLLNNL----RKIRRLDLCLIYFREMGESGIKPDLLT 210
D++N M E GV PD ISYNT++ L R R LDL ++ G G P+++T
Sbjct: 172 DVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSG--GCSPNVVT 229
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I R G + ++ LF++M QQ + P + Y S+ID L K +D A + +M
Sbjct: 230 YNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMI 289
Query: 271 SS 272
S+
Sbjct: 290 SN 291
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 118/270 (43%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PN--AYNCVLVASAETNDIDLSFQILKDL 59
N ++ LC+ A+ LL ++ K+ PN YN V+ ++ + + ++
Sbjct: 194 NTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEM 253
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ YT+ A + + + +++ + + N +I ++ S Q
Sbjct: 254 MQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQW 313
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++ +F + P+++T N + L + G+ + F SM G P+ ++Y+ L
Sbjct: 314 KETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVL 373
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ L F M +GI D + +ID++G+ G ++E++ +F M++Q +
Sbjct: 374 LHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGV 433
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +I +MG++ AM F +M
Sbjct: 434 IPDACTYGIVIAAFSRMGRLADAMDKFNQM 463
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM--KEAGVVPDFISYNTLLN 181
L+ + L +PD I+YN V+ L R L+ +M K G P+ ++YNT+++
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + + F EM + G+ PD++TYT++ID+ + ++++ + M +P
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y +I G+ +F EM S
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTS 325
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 111/269 (41%), Gaps = 2/269 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C GN+ A L+ + + I PN +N ++ + + + + I ++
Sbjct: 479 IQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIG 538
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + + + + ++ ++ ++ N +I + ++ +I+ L
Sbjct: 539 ERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGL 598
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++F + KP ITY I+L L GR M E+G D + +L L
Sbjct: 599 ILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGL 658
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ D + F+++G +K ++ +ID+ + EE+ LF+ + + P+
Sbjct: 659 CRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNA 718
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +I NL K G V+ A +F M S
Sbjct: 719 STYGVMIKNLLKEGSVEEADNMFSLMEKS 747
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I ++N +I A K R+ E+A +FD I P+ TY +++ L + G V + N F
Sbjct: 682 NIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMF 741
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+++G P N ++ L + + Y ++ I + T + L+ F R
Sbjct: 742 SLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSRE 801
Query: 222 GNIEESLRLF 231
G E ++L
Sbjct: 802 GKYWEDVKLL 811
>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I LC + + + +LL+ + + F P + N + + D+ + ++K +
Sbjct: 270 NNLINGLCNSDRLEESYKLLKEMEESG-FKPTQFTLNSIFGCLCKRQDVSGALDLVKKMR 328
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT R + IF+ ++VQ P +II + ++ + ++++
Sbjct: 329 LYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVD 388
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL +F I PD+I YNI++ L R + N F M G++P ++YN L+
Sbjct: 389 QALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLI 448
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D + M +P++ TYT LID + G ++++ L+N+M+++ R
Sbjct: 449 DGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCR 508
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFE 267
P+ + I L K K + A+ F
Sbjct: 509 PNRVAFMGFIHGLCKCDKPEAALIHFH 535
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 125/287 (43%), Gaps = 17/287 (5%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSL--------------RDKNIFLPN--AYNCVLVASA 44
+CN + L +G + A LL+++ RD+ I PN +++ V+
Sbjct: 184 LCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKI-RPNTASFSIVINGLM 242
Query: 45 ETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESII 104
+ +DL+ + +D+ Y N +D + ++E+ + +
Sbjct: 243 QACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQF 302
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+N I K + + AL + ++ C+P + Y +++ L + G+ + M
Sbjct: 303 TLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDM 362
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G P+ I+Y+ LL L +++ +D L F+++ G PD++ Y L+
Sbjct: 363 VQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRT 422
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
EE+ LFN+M + + PS+ Y LID K G +D AM M++
Sbjct: 423 EEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSA 469
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 42/268 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ KLCK G + A L + + F PN AY+ +L E ++D + ++ KD +S+
Sbjct: 343 VRKLCKHGKAAEASIFLTDMVQEG-FPPNIIAYSALLGGLIEVQEVDQALKLFKD--ISA 399
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R D +I N ++ ++ + E+A
Sbjct: 400 RGRCPD---------------------------------VIAYNILMKGLYEAHRTEEAR 426
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+F+ + KGL P ++TYN+++D + G ++D +N SM P+ +Y TL++
Sbjct: 427 NLFNEMVMKGLI--PSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLID 484
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K R D ++ + EM G +P+ + + I + E +L F++M+++++ P
Sbjct: 485 GLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEP 544
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
YVY SL+ + +A I ++M
Sbjct: 545 DTYVYISLVSAFVNISNFPMAFEILKKM 572
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/277 (16%), Positives = 127/277 (45%), Gaps = 16/277 (5%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
C AG A+ + ++D ++ ++++ ++ +D SF+ ++ + + L+
Sbjct: 21 CNAGKFDEALNVFNEIQDHGWLDAYVFSILVLSFSKWGQVDKSFEFIEKMEEQNFRLNEK 80
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
+ N F+ + + ++ + I + + +I F +++++KAL ++ +
Sbjct: 81 TFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKALSLYAEM 140
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K LK +PD+ + ++ G++ D+L E ++++ + + N++L++L +
Sbjct: 141 KMLKIQPDIGVVSKLISSFPEEGKLIDILEE--TLEDMNIETQTLLCNSVLSSLVNSGLI 198
Query: 190 DLCLIYFREMGESG--------------IKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
D R M +G I+P+ +++ +I+ + ++ ++ LF DM
Sbjct: 199 DKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMA 258
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + +Y +LI+ L +++ + + +EM S
Sbjct: 259 EIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEES 295
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ + + + ++AL +F+ I+ D ++I++ + G+V+ M+E
Sbjct: 16 VLQVYCNAGKFDEALNVFNEIQD-HGWLDAYVFSILVLSFSKWGQVDKSFEFIEKMEEQN 74
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ ++ L++ K R+D + F +M + G+ PD+ Y LI F ++++L
Sbjct: 75 FRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKAL 134
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGK-VDLAMTIFEEMN 270
L+ +MK +I+P I V LI + + GK +D+ E+MN
Sbjct: 135 SLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMN 177
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 127/270 (47%), Gaps = 3/270 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
C+ I + G + A L+ + + P YN +L + + I+K++
Sbjct: 283 CSTVISACGREGLLDEAKEFFVGLKSQG-YAPGTVTYNALLQVFGKAGIYSEALSIMKEM 341
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ + Y A++ + I+ + + + + +I A+ ++ Q+
Sbjct: 342 EDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQV 401
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KAL ++D +K C P++ TYN +L +LG+ + +M+ MK G P+ I++NT+
Sbjct: 402 DKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTM 461
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L+ F+EM G +PD T+ LI + GR G+ ++ +++++M +
Sbjct: 462 LSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGF 521
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
PS+ Y +L++ L + G A ++ ++M
Sbjct: 522 TPSVATYNALLNALARRGDWRTAESVIKDM 551
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV-------------- 154
I+ ++++ + E+A+ IF+ + P L+TYN++LD+ G++GR
Sbjct: 215 ILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSK 274
Query: 155 ------------------NDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
+L+E F +K G P ++YN LL K
Sbjct: 275 GLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEA 334
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L +EM ++ PD +TY L+ ++ R G EE L + M + I+P+ Y ++I+
Sbjct: 335 LSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINA 394
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
+ +VD A++++++M S
Sbjct: 395 YGRAAQVDKALSLYDQMKES 414
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 5/260 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ KAG S A+ +++ + D N P+A YN ++ A + ++ +
Sbjct: 319 NALLQVFGKAGIYSEALSIMKEMEDNNC-PPDAVTYNELVAAYVRAGFYEEGAALIDTMT 377
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ YT A+ + L +++ + ++ N I+ K Q E
Sbjct: 378 ENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSE 437
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ + I +K C P+ IT+N +L + G G + F MK G PD ++NTL+
Sbjct: 438 EMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLI 497
Query: 181 N-NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ R +D IY EM E+G P + TY AL+++ R G+ + + DMK +
Sbjct: 498 TASGRCGSDIDAEKIY-DEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGF 556
Query: 240 RPSIYVYRSLIDNLKKMGKV 259
+PS Y ++++ K G V
Sbjct: 557 KPSETSYSLILNSYAKGGYV 576
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+ N ++ F K+ +AL I ++ C PD +TYN ++ R G +
Sbjct: 314 GTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALI 373
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+M E G+ P+ ++Y T++N + ++D L + +M ESG P++ TY A++ G+
Sbjct: 374 DTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKK 433
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
EE +++ DMK P+ + +++ G +F+EM S
Sbjct: 434 SQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKS 483
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 127/293 (43%), Gaps = 19/293 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L + G+ A +++ +++K F P+ +Y+ +L + A+ + +I KD+
Sbjct: 529 NALLNALARRGDWRTAESVIKDMKNKG-FKPSETSYSLILNSYAKGGYVKGINRIEKDIY 587
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPES----IIVVNRIIFAFA 114
+ ++ R I+ + + L +E Q ++V N ++ F+
Sbjct: 588 ------DGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFS 641
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ ++A I I+ +PDL+TYN ++D+ R G ++ +G D I
Sbjct: 642 RKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLI 701
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYNT++ + + L EM GI+P ++TY + + G E + + M
Sbjct: 702 SYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYM 761
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
+ RP+ Y+ ++D K K AM S+++D+ D++ R
Sbjct: 762 TKHDCRPNELTYKIVVDGYCKAKKFKEAMDFV----STITDIDDSFDYQSMRR 810
>gi|115482834|ref|NP_001065010.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|31432949|gb|AAP54520.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|62733610|gb|AAX95727.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639619|dbj|BAF26924.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|125575336|gb|EAZ16620.1| hypothetical protein OsJ_32092 [Oryza sativa Japonica Group]
Length = 507
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 7/275 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
M N ++ + G + A RLL+ + DK + + + +LV ++ + + L +
Sbjct: 184 MYNLILKIFAECGELKAMWRLLEDMTDKGLPVSSRTFHLLVCTSGRAGLR---RRLVERF 240
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ--IASPES--IIVVNRIIFAFAKS 116
+ S + + N A + T + IE V Q IA S ++ N ++ A
Sbjct: 241 IKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGHSPDVLTYNVVMRAKYML 300
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
R++++ + D + PDL TYN++L +LG+ + LN M + G VP + +
Sbjct: 301 RKLDQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALNLLNYMSDVGCVPTVLHF 360
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L++ L + L+ C +F EM + G +PD++ YT +I + G +E+ + F+DM
Sbjct: 361 TNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLL 420
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P++Y Y S+I L +G+ D A ++ ++M S
Sbjct: 421 RGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMES 455
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 4/283 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIF----LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+C +G RL++ + F N++N +L L + + ++
Sbjct: 224 VCTSGRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGH 283
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y RA M Q ++E+ + + N ++ K + AL
Sbjct: 284 SPDVLTYNVVMRAKYMLRKLDQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALN 343
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ +++ + C P ++ + ++D L R G + F M + G PD + Y ++
Sbjct: 344 LLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYV 403
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
D +F +M G P++ TY ++I G +++ L DM+ + P+
Sbjct: 404 AAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFT 463
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
VY +L+ L+ GK A I + M + L F+R R
Sbjct: 464 VYSTLVSRLRNAGKDSEANNIIQYMTNKGHYLHLLSRFRRYRR 506
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK + AA + + K P+ + ++ ID ++L ++
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCS-PDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y F + D L ++++ I+ N ++ + +++
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480
Query: 121 KALLIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
AL +F ++ K +PD++TYNI++ L G+ + + M G+
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
VPD I+Y+++++ L K RLD F MG P+++T+ LI+ + + G +++ L
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF +M ++ I +Y +LI +K+G ++ A+ IF+EM SS
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 8/283 (2%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDL 59
+++ +CK G+ +A+ LL+ + + + PN Y+ + L +D F ++D
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ ++ +C F ++ + ++E+++ +++ N +I AF K +
Sbjct: 283 GIFPNIVTYNCMIG---GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF 339
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A ++D + P+ ITYN ++D + R++ + F M G PD ++ TL
Sbjct: 340 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 399
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ +R+D + EM G+ + +TY LI F G++ +L L M +
Sbjct: 400 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
P I +L+D L GK+ A+ +F+ M S DL F
Sbjct: 460 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPF 502
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 18/284 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C +G SAA RLLQ + ++ I PN YN ++ A + + ++ ++L
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKIS-PNVVTYNALINAFVKEGKFFEAAELYDEML 350
Query: 61 VSSRTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ Y + F D D + + ++ + SP+ + +I + +++
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL-MATKGCSPD-VFTFTTLIDGYCGAKR 408
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ + + + + +TYN ++ VG +N L+ M +GV PD ++ NT
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468
Query: 179 LLNNLRKIRRLDLCLIYFREMGES-----------GIKPDLLTYTALIDSFGRTGNIEES 227
LL+ L +L L F+ M +S G++PD+LTY LI G E+
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+ +M + I P Y S+ID L K ++D A +F M S
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I + +A +++ + PD ITY+ ++D L + R+++ F
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 568
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
SM P+ +++NTL+N K R+D L F EMG GI D + Y LI F + G
Sbjct: 569 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 628
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
NI +L +F +M + P R+++ +++ A+ + E++
Sbjct: 629 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
QI P+ ++ ++ + ++ +A+ + D + +PD ITY +D + ++G
Sbjct: 176 QICRPD-VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234
Query: 156 DMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
LN M+E + + P+ + Y+ +++ L K R F EM + GI P+++TY +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I F +G + RL +M +++I P++ Y +LI+ K GK A +++EM
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F ++ AL F + L PD++T+ +L L RV++ L+ F +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD +++ TL+N L + R+ + M E+G++PD +TY +D + G+ +L
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 229 RLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
L M++ I+P++ +Y ++ID L K G+ + +F EM
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ 280
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 116/254 (45%), Gaps = 20/254 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC--VLVASAETNDIDLSFQILKDLL 60
N I C G+++AA+ L Q + + P+ C +L + + + ++ K +
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGV-CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLI--------FIE-EVVQIASPESIIVVNRIIF 111
S L + N ++T +LI F+E E + P IV + I +
Sbjct: 491 KSKMDLDASHPFNGVEPDVLT---YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547
Query: 112 A-----FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+ K ++++A +F + P+++T+N +++ + GRV+D L F M
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+V D I Y TL+ RK+ ++ L F+EM SG+ PD +T ++ F +E
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667
Query: 227 SLRLFNDMKQQQIR 240
++ + D+++ Q+
Sbjct: 668 AVAMLEDLQRYQLE 681
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 87/168 (51%), Gaps = 4/168 (2%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+I N+++ A + + + + ++ ++ + + D+ ++ I++ ++ L+ F
Sbjct: 80 SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ + G+ PD +++ TLL+ L R+ L F ++ +PD+LT+T L++ R
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCRE 195
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G + E++ L + M + ++P Y + +D + KMG A+ + +M
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +E A+ +F + + P +I +N ++ + R+ R + +++ + M+ + D S+
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L+ +L L F ++ + G+ PD++T+T L+ + E+L LF+
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH---- 175
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Q RP + + +L++ L + G+V A+ + + M
Sbjct: 176 QICRPDVLTFTTLMNGLCREGRVVEAVALLDRM 208
>gi|341606821|gb|AEK83513.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 205
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 135
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKV+ AMT+F+ M
Sbjct: 136 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 180
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 38 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 97
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 98 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 157
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G + E++ LF M++++ ++Y Y LI + K
Sbjct: 158 NALIDALTKHGKVNEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 8 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 65
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 66 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSL 125
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 126 IDGLGKAGRIDEAERLFEEMSE 147
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 2 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 108
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID K
Sbjct: 2 YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61
Query: 256 MGKVDLAMTIFEEM 269
G V+ A+ + M
Sbjct: 62 SGSVEDAIRLLHRM 75
>gi|341606823|gb|AEK83514.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 92/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 16 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 75
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 76 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 135
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKV+ AMT+F+ M
Sbjct: 136 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 180
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 38 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 97
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 98 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 157
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G + E++ LF M++++ ++Y Y LI + K
Sbjct: 158 NALIDALTKHGKVNEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 202
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 8 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 65
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 66 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSL 125
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 126 IDGLGKAGRIDEAERLFEEMSE 147
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 2 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 61 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 108
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID K
Sbjct: 2 YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61
Query: 256 MGKVDLAMTIFEEM 269
G V+ A+ + M
Sbjct: 62 SGSVEDAIRLLHRM 75
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ + + K+L+ + Y + AF D ++ EE+V
Sbjct: 104 YNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELV 163
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + I N +I + K +++ AL ++D ++ + C PD +TY +++D LG++ R++
Sbjct: 164 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 223
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ M +AG+ P ++++ L+ K R D F M ESG+KPD L Y ++
Sbjct: 224 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVML 283
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
D F R+ + + L+ M + +P +Y+ L+ L K + D + ++M +
Sbjct: 284 DVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA 339
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + EV Q I N +I A ++ ++ A+ +F+ + +C+PDL TYN ++ +
Sbjct: 51 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSV 110
Query: 148 LGRVGRV----------------------NDMLNEFA-------------SMKEAGVVPD 172
GR G+ N +L FA + +AG D
Sbjct: 111 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 170
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+YNT+++ K+ RLDL L + EM G PD +TYT L+DS G+ I E+ ++
Sbjct: 171 GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 230
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++P++ + +LI K G+ D A F+ M S
Sbjct: 231 EMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVES 270
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL--DLCLIYFREMGES 202
+ + R GR +D +M++ + PD +S+NTL+N K L + L E+ ++
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G++PD +TY LI + + N+++++ +F +M + RP ++ Y +++ + GK A
Sbjct: 61 GLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEA 120
Query: 263 MTIFEEM 269
+F+E+
Sbjct: 121 ELMFKEL 127
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 131/279 (46%), Gaps = 6/279 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+AG ++ A++L + + N P Y ++ A + + + + ++
Sbjct: 271 IHGLCEAGRINEALKLFADMTEDNC-CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT + + + E+ + S++ N +I + K I+ A
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I D ++ C P+ TYN ++ L + +V+ + M E + P I+YN+L++
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K+ L+ M E+G+ PD TY+ ID+ + G +EE+ LF+ +K + ++ +
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+Y +LID K+GK+D+A ++ E M L+D P +
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERM---LNDACLPNSY 545
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 12/243 (4%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEE 93
YN +L++ ++ ID + +LL + +S + YT + + + ++ +
Sbjct: 162 YNTILMSLSKFLLIDEMKTVYLELL--NNQISPNIYTFNAMVNGYCKIGNVVEAELYASK 219
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+VQ +I +++ ++ A +F + C+ + ++Y ++ L GR
Sbjct: 220 IVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGR 279
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNL----RKIRRLDLCLIYFREMGESGIKPDLL 209
+N+ L FA M E P +Y L+ L RK+ L+L F EM E G +P++
Sbjct: 280 INEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL----FNEMKEKGCEPNVH 335
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TYT LID + ++E+ ++ ++M ++ + PS+ Y +LID K G +D A I + M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395
Query: 270 NSS 272
S+
Sbjct: 396 ESN 398
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++ +I +AL +F + C P + TY +++ L GR + LN F MKE G
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ +Y L++ L K ++D EM E G+ P ++TY ALID + + G I+++
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M+ P+ Y LI L K KV AM + +M
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM 430
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK + A ++L + +K + +P+ YN ++ + ID +F+IL + +S
Sbjct: 341 IDGLCKENKMDEARKMLSEMSEKGL-IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + + + ++++ S+I N +I K +E A
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD TY++ +D L + GRV + F S+K GV + + Y L++
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K+ ++D+ M P+ TY LI+ + ++E+ L M ++P++
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI + K G D A+ +F M S
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVS 607
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 7/259 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK V A+ LL + ++ + P+ YN ++ + ND++ ++++L L
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLS-PSLITYNSLIHGQCKVNDLESAYRLLS--L 464
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ L D Y+ F + + V + ++ +I + K +
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ A + + + C P+ TYN++++ L + ++ + + A M GV P ++Y
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + K D L F M G +PD+ TYTA + ++ G +EE + M ++
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644
Query: 239 IRPSIYVYRSLIDNLKKMG 257
I P + Y LID ++G
Sbjct: 645 ILPDLVTYTVLIDGYARLG 663
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 36/250 (14%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSS 63
+I+ LCK G V A L S++ K + Y ++ + ID+++ +L+
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE------ 533
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R L+ C N N +I K +++++A
Sbjct: 534 RMLNDACLPNS-----------------------------YTYNVLIEGLCKEKKMKEAS 564
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + KP ++TY I++ + + G + L F M G PD +Y L+
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
L+ +M E GI PDL+TYT LID + R G + M +PS+
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684
Query: 244 YVYRSLIDNL 253
Y+ LI NL
Sbjct: 685 YIVSILIKNL 694
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 71/138 (51%)
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
K KP L YN +L L + +++M + + + P+ ++N ++N KI +
Sbjct: 154 KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
+Y ++ ++G+ PD TYT+LI R ++ + +F M Q+ + + Y +LI
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273
Query: 253 LKKMGKVDLAMTIFEEMN 270
L + G+++ A+ +F +M
Sbjct: 274 LCEAGRINEALKLFADMT 291
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M E G D Y L+ + RL+ M E G+ P Y +L+D +
Sbjct: 736 FEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK 795
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
G E++RL + M + + P + Y+ L+ L G + A +F
Sbjct: 796 LGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFH 842
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLD 146
+ + + +++ I N +I + + ++AL + + +G +C PD++++N V+
Sbjct: 181 VLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIH 240
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+ G V+ N F M + GVVPD +YN++++ L K R +D R+M + G++P
Sbjct: 241 GFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEP 300
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D +TY A+I + +G+ +ES ++F M + + P + S + +L K G+ A IF
Sbjct: 301 DGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIF 360
Query: 267 EEMNS 271
+ M +
Sbjct: 361 QYMTT 365
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I K G VS A L + K + +P+ YN ++ A + +D + +L+ ++
Sbjct: 236 NTVIHGFFKQGEVSKACNLFNEMVQKGV-VPDVGTYNSIVDALCKARAMDKAEFVLRQMV 294
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + + ++ + + + + K + +
Sbjct: 295 DKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSK 354
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IF ++ PD+++Y+I+L GR DM N F SM + G+V + N L+
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D ++ F EM G++P+++TY+ LI +F R G + +++ F+ M I
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ VY SLI G + A EM S
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMS 505
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ +V + ++ N ++ + KS +I+ L++F + K KP +TYNIVLD L R
Sbjct: 571 LDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLR 630
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GR + F M ++G D +Y LL L + D + F ++G K D+
Sbjct: 631 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 690
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+I++ + EE+ LF + + P++ Y +I NL K G V+ A T+F M
Sbjct: 691 LNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSME 750
Query: 271 SS 272
S
Sbjct: 751 KS 752
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 4/271 (1%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVS 62
+++ LC A AV +L + +P+A YN V+ + + + +++ +
Sbjct: 165 FLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKE 224
Query: 63 SRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S D + F + ++ E+VQ + N I+ A K+R ++
Sbjct: 225 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMD 284
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA + + +PD +TYN ++ G + F M G++PD +++++ +
Sbjct: 285 KAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFM 344
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++L K R F+ M G PD+++Y+ L+ + G + LF+ M + I
Sbjct: 345 SSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIV 404
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + LI K G +D AM +F EM
Sbjct: 405 SNCHCINILISAHAKRGMMDEAMLVFTEMQG 435
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 3/203 (1%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQ--IASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + F M D + FI E++ + P +I+ + II + ++ A +F+
Sbjct: 480 YHSLIHGFCMHGDLVKAKEFISEMMSKGLHRP-NIVFFSSIIHSLCIEGRVMDAQDVFNL 538
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ + +P ++T+N ++D VG++ +M G+ PD ++ NTL++ K +
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK 598
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+D LI FREM +KP +TY ++D R G + ++F++M I Y+
Sbjct: 599 IDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKI 658
Query: 249 LIDNLKKMGKVDLAMTIFEEMNS 271
L+ L + D A+T+F ++ +
Sbjct: 659 LLKGLCRNDLTDEAITLFHKLGA 681
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 117/253 (46%), Gaps = 6/253 (2%)
Query: 21 LLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAF 78
L S+ DK I + N + N ++ A A+ +D + + ++ + Y+ AF
Sbjct: 394 LFHSMADKGI-VSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAF 452
Query: 79 IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKP 136
+ +++ I + V + +I F + KA + KGL +P
Sbjct: 453 CRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLH-RP 511
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
+++ ++ ++ L GRV D + F + G P +++N+L++ + +++
Sbjct: 512 NIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 571
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M GI+PD++T L+ + ++G I++ L LF +M ++++P+ Y ++D L +
Sbjct: 572 DAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRA 631
Query: 257 GKVDLAMTIFEEM 269
G+ A +F EM
Sbjct: 632 GRTSAAKKMFHEM 644
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
V+ I +I+ N +I + ++EKA + D + + +PD++T N ++ + G+
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK 598
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
++D L F M V P ++YN +L+ L + R F EM +SG D+ TY
Sbjct: 599 IDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKI 658
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L+ R +E++ LF+ + + I + ++I+ L K+ + + A +F +++S
Sbjct: 659 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTS 717
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK + AA + + K P+ + ++ ID ++L ++
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCS-PDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y F + D L ++++ I+ N ++ + +++
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480
Query: 121 KALLIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
AL +F ++ K +PD++TYNI++ L G+ + + M G+
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
VPD I+Y+++++ L K RLD F MG P+++T+ LI+ + + G +++ L
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF +M ++ I +Y +LI +K+G ++ A+ IF+EM SS
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 8/283 (2%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDL 59
+++ +CK G+ +A+ LL+ + + + PN Y+ + L +D F ++D
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ ++ +C F ++ + ++E+++ +++ N +I AF K +
Sbjct: 283 GIFPNIVTYNCMIG---GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF 339
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A ++D + P+ ITYN ++D + R++ + F M G PD ++ TL
Sbjct: 340 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 399
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ +R+D + EM G+ + +TY LI F G++ +L L M +
Sbjct: 400 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
P I +L+D L GK+ A+ +F+ M S DL F
Sbjct: 460 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPF 502
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 18/284 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C +G SAA RLLQ + ++ I PN YN ++ A + + ++ ++L
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKIS-PNVVTYNALINAFVKEGKFFEAAELYDEML 350
Query: 61 VSSRTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ Y + F D D + + ++ + SP+ + +I + +++
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL-MATKGCSPD-VFTFTTLIDGYCGAKR 408
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ + + + + +TYN ++ VG +N L+ M +GV PD ++ NT
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468
Query: 179 LLNNLRKIRRLDLCLIYFREMGES-----------GIKPDLLTYTALIDSFGRTGNIEES 227
LL+ L +L L F+ M +S G++PD+LTY LI G E+
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+ +M + I P Y S+ID L K ++D A +F M S
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I + +A +++ + PD ITY+ ++D L + R+++ F
Sbjct: 509 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 568
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
SM P+ +++NTL+N K R+D L F EMG GI D + Y LI F + G
Sbjct: 569 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 628
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
NI +L +F +M + P R+++ +++ A+ + E++ S+
Sbjct: 629 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVG 680
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
QI P+ ++ ++ + ++ +A+ + D + +PD ITY +D + ++G
Sbjct: 176 QICRPD-VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234
Query: 156 DMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
LN M+E + + P+ + Y+ +++ L K R F EM + GI P+++TY +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I F +G + RL +M +++I P++ Y +LI+ K GK A +++EM
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F ++ AL F + L PD++T+ +L L RV++ L+ F +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD +++ TL+N L + R+ + M E+G++PD +TY +D + G+ +L
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 229 RLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
L M++ I+P++ +Y ++ID L K G+ + +F EM
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ 280
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 87/168 (51%), Gaps = 4/168 (2%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+I N+++ A + + + + ++ ++ + + D+ ++ I++ ++ L+ F
Sbjct: 80 SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ + G+ PD +++ TLL+ L R+ L F ++ +PD+LT+T L++ R
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCRE 195
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G + E++ L + M + ++P Y + +D + KMG A+ + +M
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +E A+ +F + + P +I +N ++ + R+ R + +++ + M+ + D S+
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L+ +L L F ++ + G+ PD++T+T L+ + E+L LF+
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH---- 175
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Q RP + + +L++ L + G+V A+ + + M
Sbjct: 176 QICRPDVLTFTTLMNGLCREGRVVEAVALLDRM 208
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 88/210 (41%), Gaps = 30/210 (14%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFL----------PN--AYN---CVLVASAET 46
CN ++ LC G + A+ + ++++ + L P+ YN C L+ +
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 525
Query: 47 NDIDLSFQ------ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASP 100
+ + ++ I+ D + S + C + D+ TQ+ F+ + SP
Sbjct: 526 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS------RLDEATQM--FVSMGSKSFSP 577
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++ N +I + K+ +++ L +F + D I Y ++ +VG +N L+
Sbjct: 578 -NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDI 636
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
F M +GV PD I+ +L L+
Sbjct: 637 FQEMISSGVYPDTITIRNMLTGFWSKEELE 666
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F +E+++ P S+ N ++ F K I AL +FD I +P ++++N +++
Sbjct: 127 FYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM + G+ P+ +
Sbjct: 187 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 246
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 306
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 121/273 (44%), Gaps = 15/273 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A+ + ++ + P+ ++N ++ D+D F++ + S
Sbjct: 147 MHRFCKEGDIRVALSVFDAITKWGL-RPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 205
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD +L +E++ + + +I K+
Sbjct: 206 --VQPDVYTYSVLINGLCKESKM-DDANELF---DEMLDKGLVPNGVTFTTLIDGHCKNG 259
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ ++ + PDLITYN ++ L + G + + M+ G+ PD ISY
Sbjct: 260 RVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYT 319
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ K L+ + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 320 TLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSV 379
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RP Y +I+ K G V + +EM
Sbjct: 380 GLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 412
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A +FD + KGL P+ +T+ ++D + GRV+ + + M
Sbjct: 216 LINGLCKESKMDDANELFDEMLDKGLV--PNGVTFTTLIDGHCKNGRVDLAMEVYKQMLS 273
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ PD I+YNTL+ L K L EM G+KPD ++YT LID + G++E
Sbjct: 274 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLET 333
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M Q+ IR Y +LI L + G+ A + EM S
Sbjct: 334 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLS 378
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 40/250 (16%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + DK + +PN + ++ + +DL+ ++ K +L S
Sbjct: 217 INGLCKESKMDDANELFDEMLDKGL-VPNGVTFTTLIDGHCKNGRVDLAMEVYKQML--S 273
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 274 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 300
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D ++ KPD I+Y ++D + G + M + + D ++Y L++ L
Sbjct: 301 DLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 360
Query: 184 -RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
++ R +D + REM G++PD TYT +I+ F + G++ +L +M++ PS
Sbjct: 361 CQEGRSIDAEKM-LREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 419
Query: 243 IYVYRSLIDN 252
+ Y L++
Sbjct: 420 VVTYNVLMNG 429
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 67/138 (48%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E F + +L +L K++ L
Sbjct: 67 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWX 126
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
+++E+ E G L + L+ F + G+I +L +F+ + + +RPS+ + +L++
Sbjct: 127 FYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M++S
Sbjct: 187 RLGDLDEGFRLKSAMHAS 204
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N + F K I A +FD I +P +++YN +++
Sbjct: 129 FYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 189 RLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGV 248
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G ++ A + +EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEM 308
Query: 270 N 270
+
Sbjct: 309 S 309
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A +FD +KGL P+ +T+ ++D + GRV+ + + M
Sbjct: 218 LINGLCKESKMDXANELFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
++PD I+YNTL+ L K L+ EM G+KPD +TYT LID + G+++
Sbjct: 276 QSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDT 335
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M Q+ IR Y +LI L + G+ A + EM S
Sbjct: 336 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLS 380
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 121/272 (44%), Gaps = 15/272 (5%)
Query: 7 EKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ CK G++ A + ++ + P+ +YN ++ D+D F++ + S
Sbjct: 150 HRFCKEGDIRVAQSVFDAITKWGL-RPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASG- 207
Query: 65 TLSSDCYTNFARAFIMTDDCTQLL------IFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D YT + ++ C + +F E +V+ P + +I K+ +
Sbjct: 208 -VXPDVYT---YSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTT-LIDGHCKNGR 262
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ A+ I+ + PDLITYN ++ L + G +N + M G+ PD I+Y T
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTT 322
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVG 382
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ + K G V + +EM
Sbjct: 383 LKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQ 414
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E F + +L +L K++ L
Sbjct: 69 RSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 129 FYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M++S
Sbjct: 189 RLGDLDEGFKLKSAMHAS 206
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 121/252 (48%), Gaps = 34/252 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I LCKAG A RLL+ L ++ D+ + I+ L + R
Sbjct: 205 INGLCKAGETKAVARLLRKLEGHSV---------------KPDVVMYTTIIHCLCKNKR- 248
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ D C ++ E +V+ SP ++ N +I+ F +++A +
Sbjct: 249 --------------VGDACD---LYSEMIVKGISP-NVFTYNTLIYGFCIMGNLKEAFSL 290
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ +K PD+ T+NI++D LG+ G++++ ++ F MK + P+ ++Y +L++ L K
Sbjct: 291 LNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCK 350
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
L+ + ++M E GI+PD+ +YT L+D+ + G +E + + F + + ++
Sbjct: 351 NHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRT 410
Query: 246 YRSLIDNLKKMG 257
Y +I+ L K G
Sbjct: 411 YNVMINGLCKAG 422
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I +N +I +I++AL D + + D ++Y +++ L + G +
Sbjct: 164 ITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRK 223
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
++ V PD + Y T+++ L K +R+ D C +Y EM GI P++ TY LI F G
Sbjct: 224 LEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY-SEMIVKGISPNVFTYNTLIYGFCIMG 282
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N++E+ L N+MK + I P +Y + LID L K GK+D A+++FEEM
Sbjct: 283 NLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%)
Query: 48 DIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVN 107
I +F + ++L + + + + L F ++VV +
Sbjct: 143 HITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYG 202
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
+I K+ + + + ++G KPD++ Y ++ L + RV D + ++ M
Sbjct: 203 TLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVK 262
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G+ P+ +YNTL+ + L EM I PD+ T+ LID+ G+ G I+E+
Sbjct: 263 GISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEA 322
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LF +MK + + P+I Y SLID L K ++ A+ + ++M
Sbjct: 323 ISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKM 364
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVLD---ILGRVGRVNDM 157
+++ II K++++ A ++ +KG+ P++ TYN ++ I+G + +
Sbjct: 233 VVMYTTIIHCLCKNKRVGDACDLYSEMIVKGIS--PNVFTYNTLIYGFCIMGNLKEAFSL 290
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
LNE MK + PD ++N L++ L K ++D + F EM + P+++TYT+LID
Sbjct: 291 LNE---MKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDG 347
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++E ++ L MK+Q I+P +Y Y L+D L K G+++ A F+ +
Sbjct: 348 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHL 399
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P + I+ + K++ + +F + P+L T NI+++ + + +
Sbjct: 90 PPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFS 149
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
FA++ + G PD I+ NTL+ L + L + ++ G + D ++Y LI+
Sbjct: 150 VFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLC 209
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G + RL ++ ++P + +Y ++I L K +V A ++ EM
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEM 259
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I C GN+ A LL ++ KNI P+ Y N ++ A + ID + + +++
Sbjct: 272 NTLIYGFCIMGNLKEAFSLLNEMKLKNIN-PDVYTFNILIDALGKEGKIDEAISLFEEMK 330
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT+ + + +++ + + ++ A K ++E
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390
Query: 121 KALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A F H +KG ++ TYN++++ L + G D+++ + M+ G +PD I++ T
Sbjct: 391 NAKQFFQHLLVKGYHL--NVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKT 448
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGI 204
++ L + D + REM G+
Sbjct: 449 IICALFEKDENDKAEKFLREMIARGL 474
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 58/138 (42%)
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ F+ + ++ P ++ +L L + +++ F + GV P+ + N L+N
Sbjct: 77 AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + F + + G PD +T LI G I+ +L + + Q +
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196
Query: 242 SIYVYRSLIDNLKKMGKV 259
Y +LI+ L K G+
Sbjct: 197 DQVSYGTLINGLCKAGET 214
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I KA VS A L +++ + LPN Y+ ++ + ++ + QI + + S
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
D Y F DD ++ +++ ++ F KS ++E+A
Sbjct: 619 DVPDVDMY------FKQYDDNSE-------------RPNVVTYGALLDGFCKSHRVEEAR 659
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + C+P+ I Y+ ++D L +VG++++ M E G +Y++L++
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 184 RKIRRLDLC----------------LIY-------------------FREMGESGIKPDL 208
K++R DL +IY + M E G +P++
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TYTA+ID FG G IE L L M + + P+ YR LID+ K G +D+A + EE
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 269 MNSS 272
M +
Sbjct: 840 MKQT 843
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 130/292 (44%), Gaps = 25/292 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETND------IDLSFQ 54
N + C +G+ S A +LL+ + K +P YN ++ + D +DL+ +
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMV-KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
++L + L+ ++F R + I E++ ++++
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ ++E A L+F+ +K D+ TY I++D + G + F M+E G P+ +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN-- 232
+Y L++ K +++ F M G P+++TY+ALID + G +E++ ++F
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 233 ---------DMKQQQI-----RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
DM +Q RP++ Y +L+D K +V+ A + + M+
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 5/174 (2%)
Query: 104 IVVNRI-IFAFAK----SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+V+N+I + +F + + + EKA + + G PD TY+ VL+ L ++
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F MK G+V D +Y ++++ K ++ +F EM E G P+++TYTALI ++
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + + LF M + P+I Y +LID K G+V+ A IFE M S
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ ++++ + ++++ +I K + ++A + ++ C+P+++TY ++D G
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G++ L M GV P++++Y L+++ K LD+ EM ++
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I+ F + ESL L +++ Q P + VYR LIDNL K ++++A+ + EE+
Sbjct: 852 YRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 271 S 271
+
Sbjct: 910 T 910
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + K C+ G+ S A+ L L+D F P+ YNC++ A + + +D + I +++
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFR-FRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+++ + FA + + L +E + P+++ ++I ++ E
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVFY-TKLISGLCEASLFE 319
Query: 121 KALLIFDHIKGLKCKPDLITYNIVL------DILGRVGRV----------------NDML 158
+A+ + ++ C P+++TY+ +L LGR RV N ++
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 159 NEFAS-------------MKEAGVVPDFISYNTLLNNLRKIRR------LDLCLIYFREM 199
+ + + M + G +P ++ YN L+ ++ + LDL + EM
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+G+ + + ++ G E++ + +M Q P Y +++ L K+
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 260 DLAMTIFEEM 269
+LA +FEEM
Sbjct: 500 ELAFLLFEEM 509
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 17/244 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ LCK G A +L+Q + +K PN V+ +A + + +I L + R
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGC-QPN----VVTYTAMIDGFGMIGKIETCLELLERM 805
Query: 66 LSSDCYTNFARAFIMTDDCTQ------LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S N+ ++ D C + +EE+ Q P ++I F K +
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EF 863
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGVVPDFISY 176
++L + D I P L Y +++D L + R+ +L E A+ A +V +Y
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS-ATLVDYSSTY 922
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L+ +L +++ F EM + G+ P++ ++ +LI R I E+L L + +
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
Query: 237 QQIR 240
+I+
Sbjct: 983 MEIQ 986
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 125/303 (41%), Gaps = 46/303 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA---YNCVLVASAETNDIDLSFQILKDLLVS 62
I+ LCK G + A + + + P Y+ ++ + DL+ ++L +L +
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHG--FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 63 SRTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + YT TD+ +L+ +EE + P +++ +I F +I
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE--KGCQP-NVVTYTAMIDGFGMIGKI 795
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA------------ 167
E L + + + P+ +TY +++D + G ++ N MK+
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 168 --GVVPDFIS-------------------YNTLLNNLRKIRRLDLCLIYFREMGE-SGIK 205
G +FI Y L++NL K +RL++ L E+ S
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 206 PDLL-TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
D TY +LI+S +E + +LF++M ++ + P + + SLI L + K+ A+
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Query: 265 IFE 267
+ +
Sbjct: 976 LLD 978
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+++ R G + L E +K+ P +YN L+ K RLD + REM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
+ ++ D T S + G E+L L ++ + P Y LI L + +
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 262 AMTIFEEMNSS 272
AM M ++
Sbjct: 321 AMDFLNRMRAT 331
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+ + +++ NRII A+ ++ + +A+ +F+ ++G +PD +TY ++DI
Sbjct: 385 LLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHA 444
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G + ++ + M+E G+ PD +Y+ ++N L K +L F EM ++G P+L+
Sbjct: 445 KSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLV 504
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N + ++L+ DM+ RP Y +++ L G +D A +F EM
Sbjct: 505 TYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEM 564
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 81/161 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I +++Q + D + + CKP ++TYN ++ GR + + + F M+ AG
Sbjct: 369 MIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEGAG 428
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K L++ + + M E G+ PD TY+A+++ G+ G + +
Sbjct: 429 YQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAY 488
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LF +M P++ Y +I K D + ++ +M
Sbjct: 489 KLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDM 529
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
K D TY ++ ILG+ + M M P ++YN +++ + L +
Sbjct: 360 KHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVK 419
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F EM +G +PD +TY LID ++G +E ++ L+ M++ + P + Y ++++ L
Sbjct: 420 VFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLG 479
Query: 255 KMGKVDLAMTIFEEM 269
K G++ A +F EM
Sbjct: 480 KGGQLAAAYKLFCEM 494
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E + +P +++ N II AK+R + + ++ ++ +PD ITY+IV+++L
Sbjct: 490 LFCEMIDNGCTP-NLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVL 548
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G +++ F M+ PD Y L++ K +D L ++ M + G++P++
Sbjct: 549 GHCGHLDEAEAVFLEMRRD-WAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNV 607
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI----DNLKKMG 257
T +L+ +F + +++ + +M Q + PS+ Y L+ D +MG
Sbjct: 608 PTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLSCCTDAHAQMG 660
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 108 RIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK- 165
R + + + Q K + +H+ GL+CK D N VL +L N L F +K
Sbjct: 299 RAVEQYYHTLQQMKWGPMTEHVLDGLRCKIDAFQANQVLKLLHDH---NIALGFFHWLKR 355
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ G D +Y T++ L + ++ EM KP ++TY +I ++GR +
Sbjct: 356 QPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLR 415
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E++++F +M+ +P Y +LID K G +++AM ++ M
Sbjct: 416 EAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRM 459
>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
Length = 388
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 6/268 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ NV A +L+ + D P+ YN ++ + D + Q+++++
Sbjct: 87 NNVIASFCEVCNVRKAKGILELMIDSGC-KPDVVTYNTLISGLCKLRRADDALQLMREME 145
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T++ Y + T+ ++E++ + P S+ N +I +SR++E
Sbjct: 146 PAPNTIT---YNTVINGLWRSRKDTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREME 202
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA+ +F +++ KC+ D +T+ ++D R R+ D M AG+ D SY LL
Sbjct: 203 KAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLL 262
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L F M + G P L++Y L+ + +E +L LF +M++++I+
Sbjct: 263 NALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQ 322
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
P + Y ++I L ++D A+ +F +
Sbjct: 323 PDVVSYTTVIKGLCAARRIDEAIDLFRD 350
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
I G P+++ +N V++ R G ++ L M++AG PD ++YNTL++ K+ R
Sbjct: 2 ILGGAVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCNPDEVTYNTLIDVFHKLER 61
Query: 189 LDLCLIYFREMGESGIKPDLL--TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
D +M +SGI+P ++ TY +I SF N+ ++ + M +P + Y
Sbjct: 62 FDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTY 121
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNSS 272
+LI L K+ + D A+ + EM +
Sbjct: 122 NTLISGLCKLRRADDALQLMREMEPA 147
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 89/176 (50%), Gaps = 5/176 (2%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
A ++++ N ++ FA++ ++ AL ++ C PD +TYN ++D+ ++ R +
Sbjct: 6 AVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCNPDEVTYNTLIDVFHKLERFDSA 65
Query: 158 LNEFASMKEAGVVPDFI--SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
M ++G+ P + +YN ++ + ++ + M +SG KPD++TY LI
Sbjct: 66 RELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYNTLI 125
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +++L+L M++ + P+ Y ++I+ L + K A + +EM S
Sbjct: 126 SGLCKLRRADDALQL---MREMEPAPNTITYNTVINGLWRSRKDTEAQALLDEMIS 178
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 143/309 (46%), Gaps = 44/309 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNI-FLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I LC+ N+ A ++L+++ D + F YN ++ + + ++ + Q+ D++
Sbjct: 466 NALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMI- 524
Query: 62 SSRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
R D +T F RA+ +L ++++ I+ II + K++ +
Sbjct: 525 -KRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDV 583
Query: 120 EKA-LLIFDHIK-GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
KA + + IK GL+ P+ + YN ++ GR G ++D + +MK G+ P I+YN
Sbjct: 584 HKANKYLIELIKNGLR--PNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYN 641
Query: 178 TL---------------------LNNLR--------------KIRRLDLCLIYFREMGES 202
+L L N+ KI ++D ++YF+EM
Sbjct: 642 SLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYR 701
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
I+P+ +TYT L+ ++ + GN EE+ +LF++M I P Y +LI ++ +D
Sbjct: 702 DIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKI 761
Query: 263 MTIFEEMNS 271
+ EM+S
Sbjct: 762 VESPAEMSS 770
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A ++ +I+ A ++ ++ +P ++TYN+++D L R GRV + M E
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P +++ L+N L + +R +EM GI P+ + Y LI R G+ E+L
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RLF++M + I+ ++ Y + L K G+++ A I +EM
Sbjct: 342 RLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEM 382
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEA-GVVPDFISYNTLLNNLRKIRRLDLCLI 194
P + T NI+++ LG G+++ F M++ V PD +Y ++ L + +D +
Sbjct: 178 PSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFV 237
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL- 253
E+ SGI+P ++TY L+D+ R+G +EE+ +L M + ++RPSI + LI+ L
Sbjct: 238 MLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLA 297
Query: 254 --KKMGKVDLAMTIFEEMNS 271
++ G+VD + +EM
Sbjct: 298 RGQRFGEVD---AVLQEMEG 314
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK-GLKCKPDLITYNIVLDIL 148
F+E + ASP SI N ++ A Q++ A +F ++ G PD+ TY +++ L
Sbjct: 168 FLELSTRGASP-SIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKAL 226
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G ++ A ++ +G+ P ++YN L++ L + R++ M E ++P +
Sbjct: 227 CRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSI 286
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+T+ LI+ R E + +M+ I P+ +Y LI + G A+ +F+E
Sbjct: 287 VTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDE 346
Query: 269 MNS 271
M S
Sbjct: 347 MVS 349
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 119/262 (45%), Gaps = 2/262 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I C+ G+ S A+RL + K I YN + A + +++ + QIL ++L+
Sbjct: 325 NQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLL 384
Query: 62 SSRTLSSDCYTNF-ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T+ + + A T +L I E+V + V+ I K + E
Sbjct: 385 AGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHE 444
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A I+ + G ++ T N ++ L + + + +M ++GV D I+YN ++
Sbjct: 445 EAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMI 504
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K +++ + +M + G KPDL T+ + ++ G +E+ L L + MK + ++
Sbjct: 505 QFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLK 564
Query: 241 PSIYVYRSLIDNLKKMGKVDLA 262
P I Y ++ID K V A
Sbjct: 565 PDIVTYGTIIDGYCKAKDVHKA 586
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 112/269 (41%), Gaps = 34/269 (12%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN +E L G + A ++ +RD N P+ Y
Sbjct: 183 CNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT------------------------ 218
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
YT +A + + + E+ + +++ N ++ A +S ++E+
Sbjct: 219 ---------YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEE 269
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + + +P ++T+ I+++ L R R ++ M+ G+ P+ + YN L+
Sbjct: 270 AFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIG 329
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ L F EM GIK ++TY + + + G +E + ++ ++M +
Sbjct: 330 WHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTV 389
Query: 242 SIYVYRSLID-NLKKMGKVDLAMTIFEEM 269
++ S++ +L+ G++D+ + + EM
Sbjct: 390 HCSLFNSVVAWHLRGTGRLDVVLRLIREM 418
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 6/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+AG + AA +L L I P YN ++ A + ++ +FQ LK +V
Sbjct: 223 IKALCRAGEIDAAFVMLAELERSGI-QPTVVTYNVLMDALCRSGRVEEAFQ-LKGRMVEG 280
Query: 64 RTLSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
R S + ++ ++E+ + ++ N++I + +A
Sbjct: 281 RLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEA 340
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN- 181
L +FD + K ++TYN++ L + G + M AG+ +N+++
Sbjct: 341 LRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAW 400
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+LR RLD+ L REM +KP+ TA I + G EE+ ++ + + +
Sbjct: 401 HLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGV 460
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+I +LI L + + A + + M S
Sbjct: 461 NIATSNALIHGLCQGNNMKEATKVLKAMVDS 491
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 115/220 (52%), Gaps = 7/220 (3%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
++ + L+ S ++ Y + F + Q L ++E+ ++++ II
Sbjct: 14 GYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIR 73
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+ ++ +ALL F I G C P++ TY+I++D L + G+ ++ M + G P
Sbjct: 74 GLCTAGKVSQALLHFRRI-GEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSP 132
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ ++YN L++ RK+ RLD L+ +EM + G + D++TYT ++D F + +I+E+ RL
Sbjct: 133 NVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLL 192
Query: 232 NDMKQQQIRPSIYVYRSLIDNLK--KMGKVDLAMTIFEEM 269
N ++++ ++ Y SL L + + A+++ E+M
Sbjct: 193 NALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLEKM 228
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
++Y I++ + G L MK GV P+ + + T++ L ++ L++FR
Sbjct: 31 VSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRR 90
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+GE P++ TY+ L+D+ ++G E+ L +M ++ P++ Y +LID +K+ +
Sbjct: 91 IGED-CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149
Query: 259 VDLAMTIFEEMN 270
+D + + +EM+
Sbjct: 150 LDEVLMLLKEMS 161
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 108/238 (45%), Gaps = 2/238 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
Y +L + N ID ++++L L + + +T + A D T+ L +E++
Sbjct: 171 TYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTA--EGDRTTEALSLLEKM 228
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+Q + + + ++ K+ ++++A + + CK D ++Y I++ GR
Sbjct: 229 IQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRT 288
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D L M +G + D + N +++ K L F+ M + G P +TY L
Sbjct: 289 YDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTL 348
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I +F + + +++L + M Q +P++ Y S+I + + + + A IF+ M S
Sbjct: 349 IGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDS 406
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCK + A ++L S+ + + +Y ++VA A S ++L +L S L
Sbjct: 247 LCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILD 306
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ F D + + + Q S S + N +I AF K++Q + A+ +
Sbjct: 307 TKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLH 366
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ KP++ITYN ++ R R + F M ++G PD +SY TL
Sbjct: 367 QMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I KA VS A L +++ + LPN Y+ ++ + ++ + QI + + S
Sbjct: 519 IHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 577
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
D Y F DD ++ +++ ++ F KS ++E+A
Sbjct: 578 DVPDVDMY------FKQYDDNSE-------------RPNVVTYGALLDGFCKSHRVEEAR 618
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + C+P+ I Y+ ++D L +VG++++ M E G +Y++L++
Sbjct: 619 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 678
Query: 184 RKIRRLDLC----------------LIY-------------------FREMGESGIKPDL 208
K++R DL +IY + M E G +P++
Sbjct: 679 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 738
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TYTA+ID FG G IE L L M + + P+ YR LID+ K G +D+A + EE
Sbjct: 739 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 798
Query: 269 MNSS 272
M +
Sbjct: 799 MKQT 802
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 130/292 (44%), Gaps = 25/292 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETND------IDLSFQ 54
N + C +G+ S A +LL+ + K +P YN ++ + D +DL+ +
Sbjct: 335 NSLVHAYCTSGDHSYAYKLLKKMV-KCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEK 393
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
++L + L+ ++F R + I E++ ++++
Sbjct: 394 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 453
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ ++E A L+F+ +K D+ TY I++D + G + F M+E G P+ +
Sbjct: 454 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 513
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN-- 232
+Y L++ K +++ F M G P+++TY+ALID + G +E++ ++F
Sbjct: 514 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573
Query: 233 ---------DMKQQQI-----RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
DM +Q RP++ Y +L+D K +V+ A + + M+
Sbjct: 574 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 625
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 6/246 (2%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQL-LIFI 91
P +N ++ A + D ++++LK ++ Y + D L+ +
Sbjct: 331 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDL 390
Query: 92 EEVVQIASPESIIVVNRI-IFAFAK----SRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
E + +V+N+I + +F + + + EKA + + G PD TY+ VL+
Sbjct: 391 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 450
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L ++ F MK G+V D +Y ++++ K ++ +F EM E G P
Sbjct: 451 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 510
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+++TYTALI ++ + + + LF M + P+I Y +LID K G+V+ A IF
Sbjct: 511 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 570
Query: 267 EEMNSS 272
E M S
Sbjct: 571 ERMCGS 576
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ ++++ + ++++ +I K + ++A + ++ C+P+++TY ++D G
Sbjct: 691 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 750
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G++ L M GV P++++Y L+++ K LD+ EM ++
Sbjct: 751 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 810
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I+ F + ESL L +++ Q P + VYR LIDNL K ++++A+ + EE+
Sbjct: 811 YRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 868
Query: 271 S 271
+
Sbjct: 869 T 869
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + K C+ G+ S A+ L L+D F P+ YNC++ A + + +D + I +++
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFR-FRPSRSTYNCLIQAFLKADRLDSASLIHREMS 221
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+++ + FA + + L +E + P+++ ++I ++ E
Sbjct: 222 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVFY-TKLISGLCEASLFE 278
Query: 121 KALLIFDHIKGLKCKPDLITYNIVL------DILGRVGRV----------------NDML 158
+A+ + ++ C P+++TY+ +L LGR RV N ++
Sbjct: 279 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 338
Query: 159 NEFAS-------------MKEAGVVPDFISYNTLLNNLRKIRR------LDLCLIYFREM 199
+ + + M + G +P ++ YN L+ ++ + LDL + EM
Sbjct: 339 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEM 398
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+G+ + + ++ G E++ + +M Q P Y +++ L K+
Sbjct: 399 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 458
Query: 260 DLAMTIFEEM 269
+LA +FEEM
Sbjct: 459 ELAFLLFEEM 468
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ LCK G A +L+Q + +K PN V+ +A + + +I L + R
Sbjct: 710 IDGLCKVGKTDEAYKLMQMMEEKGC-QPN----VVTYTAMIDGFGMIGKIETCLELLERM 764
Query: 66 LSSDCYTNFARAFIMTDDCTQ------LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S N+ ++ D C + +EE+ Q P ++I F K +
Sbjct: 765 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EF 822
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGVVPDFISY 176
++L + D I P L Y +++D L + R+ +L E A+ A +V +Y
Sbjct: 823 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS-ATLVDYSSTY 881
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
N+L+ +L +++ F EM + G+ P++ ++ +LI R I E+L L +
Sbjct: 882 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 937
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 123/303 (40%), Gaps = 46/303 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA---YNCVLVASAETNDIDLSFQILKDLLVS 62
I+ LCK G + A + + + P Y+ ++ + DL+ ++L +L +
Sbjct: 640 IDGLCKVGKLDEAQEVKTEMSEHG--FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 697
Query: 63 SRTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + YT TD+ +L+ +EE +++ +I F +I
Sbjct: 698 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK---GCQPNVVTYTAMIDGFGMIGKI 754
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA------------ 167
E L + + + P+ +TY +++D + G ++ N MK+
Sbjct: 755 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 814
Query: 168 --GVVPDFIS-------------------YNTLLNNLRKIRRLDLCLIYFREMGE-SGIK 205
G +FI Y L++NL K +RL++ L E+ S
Sbjct: 815 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 874
Query: 206 PDLL-TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
D TY +LI+S +E + +LF++M ++ + P + + SLI L + K+ A+
Sbjct: 875 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 934
Query: 265 IFE 267
+ +
Sbjct: 935 LLD 937
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+++ R G + L E +K+ P +YN L+ K RLD + REM
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
+ ++ D T S + G E+L L ++ + P Y LI L + +
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 279
Query: 262 AMTIFEEMNSS 272
AM M ++
Sbjct: 280 AMDFLNRMRAT 290
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 12/172 (6%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
IV N +I + + ++KAL I ++ + + D+ TYN + L R R+++ N
Sbjct: 319 IVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRI 378
Query: 164 MKEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M E GV P+ +SY TL++ ++ + RRL FREM +G +P L+TY ++D
Sbjct: 379 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRL------FREMAGNGAEPSLVTYNVMMDG 432
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + G+I E+ R N+M+++ + P IY Y +L+ GKVD+A+ +FEEM
Sbjct: 433 YIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEM 484
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CK G + AA L+ ++ + + + +N ++ N +D + +I +++
Sbjct: 290 INGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI--KMIMEKM 347
Query: 65 TLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D YT RA M + L I IE+ V+ P + I +
Sbjct: 348 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVR---PNHVSYTTLISIHCNEGDM 404
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E A +F + G +P L+TYN+++D + G + + M++ G+VPD SY
Sbjct: 405 VE-ARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 463
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ ++D+ L F EM + G KP+L+ YTALI + G EE+ +L+++M
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523
Query: 239 IRPSIYVYRSLIDNLK 254
+ P +Y +L+ +L
Sbjct: 524 LTPDDALYSALVGSLH 539
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK+G V+ A +LL + + + NA YN +L A D D ++LK +
Sbjct: 150 VDGYCKSGRVAHARQLLDEMPRHGVKV-NALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT D T++ EE+ + + +I A+ ++ + +A
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD G +P+ TY +++ ++G++ M+ GV + I +NT+++
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +D L M + GI+ D+ TY L R ++E+ L M ++ +RP+
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 388
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI G + A +F EM
Sbjct: 389 VSYTTLISIHCNEGDMVEARRLFREM 414
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 113/260 (43%), Gaps = 2/260 (0%)
Query: 12 AGNVSAAVRLLQSLRDK--NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AG++ A LL+ + P + + V+ ++ + + Q+L ++ +++
Sbjct: 120 AGHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
CY + A+ D ++ ++ + ++ ++ + +R I K +F+ +
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K D+ Y+ V++ R G V F G+ P+ +Y L+N KI ++
Sbjct: 240 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 299
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + +M G+ + + + +ID + R ++++L + M++ I +Y Y +L
Sbjct: 300 EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTL 359
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
L++ ++D A + M
Sbjct: 360 ACGLRRANRMDEAKNLLRIM 379
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G + D+L + A+ V P +S + +++ K R+ EM G+K +
Sbjct: 121 GHLDTAADLLKQAATSCPDSVTP--LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
L Y +L+D++ R + + + M+ + I P++ Y L+D L + +FEE
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 238
Query: 269 MNS 271
M S
Sbjct: 239 MKS 241
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ GN S A++LL ++ +I PN Y ++V E ++ + +L ++
Sbjct: 613 NTMISAQCREGNTSKALKLLNEMKWSSI-KPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T + Y +A + +L E ++ I V N ++
Sbjct: 672 SAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTR 731
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILG--RVGRVNDMLNEFASMKEAGVVPDFISYNT 178
KA ++ D + G PD IT+N + ILG + +++ +A M G+ P+ ++NT
Sbjct: 732 KATIVLDEMLGRGIAPDTITFNAL--ILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNT 789
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL L R+ EM + G++P+ LTY L+ + + N E+LRL+ +M +
Sbjct: 790 LLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKG 849
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y SLI + K G ++ A +F EM
Sbjct: 850 FIPKASTYNSLISDFAKAGMMNQAKELFSEM 880
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 109/235 (46%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+N ++ + D+ + +++ + +L Y F + D E +
Sbjct: 191 GWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERM 250
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
S++ +I + K ++IE+A +++ + PD++T + ++D L R GR
Sbjct: 251 KADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRF 310
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
++ F M + GV P+ ++Y T +++L K++R++ L EM G+ DL+ YT +
Sbjct: 311 SEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTV 370
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+D G+ G IEE+ + I P+ Y L+D + G +D A + +M
Sbjct: 371 MDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM 425
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ CK +++AA+ +++ + + + L YN ++ + D D ++++ + +
Sbjct: 193 NALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKA 252
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S +T + + E +V+ ++ ++ ++ + + +
Sbjct: 253 DGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSE 312
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +F + + P+ +TY +D L +V RVN+ L M GV D + Y T+++
Sbjct: 313 AYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMD 372
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K +++ R I P+ +TYT L+D+ R GNI+ + ++ M+++ + P
Sbjct: 373 RLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSP 432
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ + S+++ L K G + A +M S
Sbjct: 433 NVVTFSSILNGLVKRGCIAKAAGYMRKMKDS 463
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+AGN+ A ++L + +K++ PN ++ +L + I + ++ + S
Sbjct: 406 VDAHCRAGNIDGAEQMLLQMEEKSVS-PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSG 464
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F L +++ + +V+ ++ K+ IE+A
Sbjct: 465 IAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAE 524
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + D + Y ++D L + G + L + E + PD + YN +N L
Sbjct: 525 ALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCL 584
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ + + +EM +G++PD TY +I + R GN ++L+L N+MK I+P++
Sbjct: 585 CRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNL 644
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +L+ L + G V+ A + EM S+
Sbjct: 645 ITYTTLVVGLLEAGVVEKAKYLLNEMASA 673
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 35/234 (14%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F + + L + E+V +++ ++ K +IE+A + H
Sbjct: 332 YCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHAL 391
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P+ +TY +++D R G ++ M+E V P+ ++++++LN L K +
Sbjct: 392 SDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIA 451
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSF-------------------------------- 218
Y R+M +SGI P+++TY LID F
Sbjct: 452 KAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLV 511
Query: 219 ---GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ GNIEE+ LF DM ++ + Y +L+D L K G + A+ + +E+
Sbjct: 512 NGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQEL 565
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 127/302 (42%), Gaps = 40/302 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ L K GN+ A L + + ++ + L + Y ++ +T ++ + ++ ++L+ R
Sbjct: 511 VNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELM--ER 568
Query: 65 TLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
LS D Y F ++ F++E+ N +I A + KA
Sbjct: 569 NLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKA 628
Query: 123 LLIFDHIKGLKCKPDLITY-NIVLDIL--GRVGRVNDMLNEFAS---------------- 163
L + + +K KP+LITY +V+ +L G V + +LNE AS
Sbjct: 629 LKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA 688
Query: 164 ----------------MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
M AG+ D YNTL++ L I EM GI PD
Sbjct: 689 CSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPD 748
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+T+ ALI ++ +++ + + M Q + P+I + +L+ L+ G++ A T+
Sbjct: 749 TITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVIC 808
Query: 268 EM 269
EM
Sbjct: 809 EM 810
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 97/234 (41%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LC G A +L + + I P+ +N +++ +++ +D +F +L
Sbjct: 718 NTLVHVLCCHGMTRKATIVLDEMLGRGI-APDTITFNALILGHCKSSHLDNAFATYAQML 776
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + + I E+ ++ + + + ++ +AK
Sbjct: 777 HQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKV 836
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL ++ + P TYN ++ + G +N F+ MK GV+ +Y+ LL
Sbjct: 837 EALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILL 896
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
N K+R I ++M E G KP T +++ +F + G E+ RL +
Sbjct: 897 NGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ + + Q SP +I N ++ + +I +A + +K + +P+ +TY+I++
Sbjct: 772 YAQMLHQGLSP-NIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYA 830
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ + L + M G +P +YN+L+++ K ++ F EM G+
Sbjct: 831 KKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSS 890
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
TY L++ + + N E L DMK+ +PS S+ K G
Sbjct: 891 TYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPG 938
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
IE LC+AG + AV L + ++ + A L + + L + +K+L T
Sbjct: 52 IEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPST 111
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ +F + ++L +E+ + ++ +I A+ K ++ AL +
Sbjct: 112 RAYAAVVDFRCRERKAKEAEEML---QEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRV 168
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ +K CKP++ TYN ++ G+V+ + M+ GV PD ++YN L+
Sbjct: 169 LELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCI 228
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
++ R M G+ D TY ALI++ + G +++ LF+ ++ + I+P+
Sbjct: 229 DGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVT 288
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ SLI+ L K GK D+A E+M S+
Sbjct: 289 FNSLINGLCKSGKADIAWKFLEKMVSA 315
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 7/276 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ C G V A+ LL +R + P+A YN ++ I+ +F++L+ L
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVN-PDAVTYNLLIRGQCIDGHIESAFRLLR--L 241
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ L +D YT A A Q + + + + N +I KS +
Sbjct: 242 MEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK 301
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A + + C PD TY+ ++ L ++ + L+ M + V P ++Y
Sbjct: 302 ADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 361
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K R L + EM SG PD++TYT + ++ G + E+ + +M +
Sbjct: 362 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 421
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ Y +L+D +G+ D A++I ++M S S
Sbjct: 422 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS 457
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 20/286 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G A L SL + I PNA +N ++ ++ D++++ L+ ++
Sbjct: 255 NALINALCKDGRTDQACSLFDSLETRGI-KPNAVTFNSLINGLCKSGKADIAWKFLEKMV 313
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T + Y++F + L FI E++Q S + +I K R
Sbjct: 314 SAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYG 373
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ + C PD++TY + GR+N+ N M + GV D ++YNTL+
Sbjct: 374 LVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 433
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL------------ 228
+ I + D + ++M P+ TY L+ R +E+ L
Sbjct: 434 DGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIE 493
Query: 229 -----RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LF+ MK+ + P+ Y S+++ + G+ + A ++ M
Sbjct: 494 LTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM 539
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 3/265 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLS--FQILKDLLVSSRTLS 67
C+ A +LQ + +K + P C V +A + +S ++L+ + + +
Sbjct: 122 CRERKAKEAEEMLQEMFEKGL-APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y + F + + + ++ + N +I IE A +
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
++G D TYN +++ L + GR + + F S++ G+ P+ +++N+L+N L K
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+ D+ + +M +G PD TY++ I+ + +E L +M Q+ ++PS Y
Sbjct: 301 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 360
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNSS 272
+I L K L + EM SS
Sbjct: 361 IVIHKLLKERNYGLVARTWGEMVSS 385
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 111/243 (45%), Gaps = 41/243 (16%)
Query: 31 FLPNAY--NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL 88
+ P+AY N ++V TN +D++ +DL D L
Sbjct: 6 WRPDAYTFNSLIVGYCRTNQVDVA----RDLF----------------------DKMPLR 39
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F ++VV A+ +I ++ +I++A+ +F + +PD+ Y ++ L
Sbjct: 40 GFAQDVVSYAT---------LIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGL 86
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R + L MKE G P +Y +++ + R+ +EM E G+ P +
Sbjct: 87 CNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCV 146
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+T TA+I+++ + G + ++LR+ MK + +P+++ Y +L+ GKV AMT+ +
Sbjct: 147 VTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNK 206
Query: 269 MNS 271
M +
Sbjct: 207 MRA 209
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 109/265 (41%), Gaps = 22/265 (8%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
C G ++ A +L + + + AYN ++ A D + ILK + + +
Sbjct: 402 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 461
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y R + + +E+V+ + +P + K+ ++ +FD
Sbjct: 462 FTYFILLRHLVR-------MRLVEDVLPL-TPAGVW----------KAIELTDVFGLFDV 503
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+K + P+ TY+ +L+ GR + + + MKE + + Y L+ K +R
Sbjct: 504 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKR 563
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ M + G P L++Y L+ G +++ +F + + + P V++
Sbjct: 564 YLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKV 623
Query: 249 LIDNLKKMGKVDLA---MTIFEEMN 270
+ID L K G D++ + + E MN
Sbjct: 624 IIDGLIKKGHSDISREMIIMLERMN 648
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M +G PD ++N+L+ + ++D+ F +M G D+++Y LI+ G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
I+E++ LF +M Q P +++Y +L+ L
Sbjct: 61 IDEAVELFGEMDQ----PDMHMYAALVKGL 86
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M SG +PD T+ +LI + RT ++ + LF+ M + + Y +LI+ L + G+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 259 VDLAMTIFEEMN 270
+D A+ +F EM+
Sbjct: 61 IDEAVELFGEMD 72
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I KA VS A L +++ + LPN Y+ ++ + ++ + QI + + S
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
D Y F DD ++ +++ ++ F KS ++E+A
Sbjct: 619 DVPDVDMY------FKQYDDNSE-------------RPNVVTYGALLDGFCKSHRVEEAR 659
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + C+P+ I Y+ ++D L +VG++++ M E G +Y++L++
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 184 RKIRRLDLC----------------LIY-------------------FREMGESGIKPDL 208
K++R DL +IY + M E G +P++
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+TYTA+ID FG G IE L L M + + P+ YR LID+ K G +D+A + EE
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 269 MNSS 272
M +
Sbjct: 840 MKQT 843
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 130/292 (44%), Gaps = 25/292 (8%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETND------IDLSFQ 54
N + C +G+ S A +LL+ + K +P YN ++ + D +DL+ +
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMV-KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
++L + L+ ++F R + I E++ ++++
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ ++E A L+F+ +K D+ TY I++D + G + F M+E G P+ +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN-- 232
+Y L++ K +++ F M G P+++TY+ALID + G +E++ ++F
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 233 ---------DMKQQQI-----RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
DM +Q RP++ Y +L+D K +V+ A + + M+
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 5/174 (2%)
Query: 104 IVVNRI-IFAFAK----SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
+V+N+I + +F + + + EKA + + G PD TY+ VL+ L ++
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F MK G+V D +Y ++++ K ++ +F EM E G P+++TYTALI ++
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + + LF M + P+I Y +LID K G+V+ A IFE M S
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ ++++ + ++++ +I K + ++A + ++ C+P+++TY ++D G
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G++ L M GV P++++Y L+++ K LD+ EM ++
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I+ F + ESL L +++ Q P + VYR LIDNL K ++++A+ + EE+
Sbjct: 852 YRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 271 S 271
+
Sbjct: 910 T 910
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + K C+ G+ S A+ L L+D F P+ YNC++ A + + +D + I +++
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFR-FRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+++ + FA + + L +E + P+++ ++I ++ E
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVFY-TKLISGLCEASLFE 319
Query: 121 KALLIFDHIKGLKCKPDLITYNIVL------DILGRVGRV----------------NDML 158
+A+ + ++ C P+++TY+ +L LGR RV N ++
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 159 NEFAS-------------MKEAGVVPDFISYNTLLNNLRKIRR------LDLCLIYFREM 199
+ + + M + G +P ++ YN L+ ++ + LDL + EM
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+G+ + + ++ G E++ + +M Q P Y +++ L K+
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 260 DLAMTIFEEM 269
+LA +FEEM
Sbjct: 500 ELAFLLFEEM 509
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ LCK G A +L+Q + +K PN V+ +A + + +I L + R
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGC-QPN----VVTYTAMIDGFGMIGKIETCLELLERM 805
Query: 66 LSSDCYTNFARAFIMTDDCTQ------LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S N+ ++ D C + +EE+ Q P ++I F K +
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EF 863
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGVVPDFISY 176
++L + D I P L Y +++D L + R+ +L E A+ A +V +Y
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS-ATLVDYSSTY 922
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
N+L+ +L +++ F EM + G+ P++ ++ +LI R I E+L L +
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 125/303 (41%), Gaps = 46/303 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA---YNCVLVASAETNDIDLSFQILKDLLVS 62
I+ LCK G + A + + + P Y+ ++ + DL+ ++L +L +
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHG--FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 63 SRTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + YT TD+ +L+ +EE + P +++ +I F +I
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE--KGCQP-NVVTYTAMIDGFGMIGKI 795
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA------------ 167
E L + + + P+ +TY +++D + G ++ N MK+
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 168 --GVVPDFIS-------------------YNTLLNNLRKIRRLDLCLIYFREMGE-SGIK 205
G +FI Y L++NL K +RL++ L E+ S
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 206 PDLL-TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
D TY +LI+S +E + +LF++M ++ + P + + SLI L + K+ A+
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Query: 265 IFE 267
+ +
Sbjct: 976 LLD 978
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
N+++ R G + L E +K+ P +YN L+ K RLD + REM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
+ ++ D T S + G E+L L ++ + P Y LI L + +
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 262 AMTIFEEMNSS 272
AM M ++
Sbjct: 321 AMDFLNRMRAT 331
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 128/263 (48%), Gaps = 3/263 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + A LL ++ ++ + +PN +YN +++ ++D++ + D+L
Sbjct: 439 LCKGGKMDEACSLLDNMVNQGM-VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 497
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ Y+ D + L ++++ + + N II K Q+ +A
Sbjct: 498 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 557
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ P +TYN ++D + G ++ L + M E GV P+ ++Y +L+N K
Sbjct: 558 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 617
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+DL L EM E G++ D+ Y+ALID F + ++E + LF ++ + + P+ VY
Sbjct: 618 NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVY 677
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
S+I + + ++ A+ +++M
Sbjct: 678 NSMISGFRDLNNMEAALVWYKKM 700
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G +S A L++ ++ F+P+ YN ++ + +ID + + +++
Sbjct: 538 NTIINGLCKVGQMSEARDKLKNFLEEG-FIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 596
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT+ F ++ L +E+ + + + +I F K R +E
Sbjct: 597 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 656
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + + P+ I YN ++ + + L + M + D +Y TL+
Sbjct: 657 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 716
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K RL + EM GI PD++T+ L++ G +E + ++ +M ++ +
Sbjct: 717 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 776
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
PS+ +Y +LI + G + A T+ +EM
Sbjct: 777 PSVLIYNTLIAGYFREGNLKEAFTLHDEM 805
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 123/269 (45%), Gaps = 10/269 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC-----VLVASAETNDIDLSFQILKDLL 60
IE C +GN+ A L ++ I P+ +N + + + F D
Sbjct: 367 IEGCCNSGNIEKASELYTQMKLNGI-PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 425
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V++ + + + M + C+ ++ +V +++ N +I + ++
Sbjct: 426 VANIFTYNIMMSWLCKGGKMDEACS----LLDNMVNQGMVPNVVSYNDMILGHCRKGNMD 481
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + KP+++TY+I++D + G L+ F M + P ++NT++
Sbjct: 482 MASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTII 541
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K+ ++ + E G P +TY +++D F + GNI+ +L ++ +M + +
Sbjct: 542 NGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVS 601
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y SLI+ K ++DLA+ +EM
Sbjct: 602 PNVVTYTSLINGFCKSNRIDLALKTRDEM 630
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
K G+ A+ L + NI + +N ++ + + + LK+ L S
Sbjct: 511 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 570
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y + FI + L E+ + +++ +I F KS +I+ AL D +
Sbjct: 571 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 630
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
+ + D+ Y+ ++D + + + F + E G+ P+ I YN++++ R + +
Sbjct: 631 REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNM 690
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ L+++++M I DL TYT LID + G + + L+ +M + I P I + L
Sbjct: 691 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 750
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
++ L G+++ A I EEM+
Sbjct: 751 VNGLCNKGQLENARKILEEMD 771
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
K G V A + +++ + L AY+ ++ A + + +L ++L+++ S
Sbjct: 232 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 291
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
+T+ A + + + L EE++ P +++V ++ + ++ AL +F+ I
Sbjct: 292 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
P+ +TY+++++ G + + MK G+ P + N+LL K
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ F E + G+ ++ TY ++ + G ++E+ L ++M Q + P++ Y +
Sbjct: 412 EEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 470
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I + G +D+A ++F +M
Sbjct: 471 ILGHCRKGNMDMASSVFSDM 490
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K GN+ +A+ + + + + + PN Y ++ ++N IDL+ + ++
Sbjct: 573 NSIVDGFIKEGNIDSALAVYREMCEFGVS-PNVVTYTSLINGFCKSNRIDLALKTRDEMR 631
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y+ F D E++++ + IV N +I F +E
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 691
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL+ + + + DL TY ++D L + GR+ + + M G+VPD I+++ L+
Sbjct: 692 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L +L+ EM + P +L Y LI + R GN++E+ L ++M + +
Sbjct: 752 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 811
Query: 241 PSIYVYRSLID 251
P Y LI+
Sbjct: 812 PDDVTYDILIN 822
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V N ++ A+ ++ +IE A+ F+ + P + NI+L L R + ++ + + M
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
G+ D + + ++ K R++ YFRE E G+K D Y+ +I + + N
Sbjct: 212 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L L +MK++ PS + S+I G + A+ + EEM
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 316
>gi|341605699|gb|AEK82952.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G + + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGXAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 89/163 (54%), Gaps = 1/163 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCXFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNL 253
ALID+ + G ++E++ LF M++++ ++Y Y LI +
Sbjct: 161 NALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGM 203
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGXAINSMFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMS 149
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK + AA + + K P+ + ++ ID ++L ++
Sbjct: 364 NSMIDGFCKQDRLDAAEDMFYLMATKGCS-PDVFTFTTLIDGYCGAKRIDDGMELLHEMP 422
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y F + D L ++++ I+ N ++ + +++
Sbjct: 423 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 482
Query: 121 KALLIFDHIKGLK-----------CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
AL +F ++ K +PD++TYNI++ L G+ + + M G+
Sbjct: 483 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 542
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
VPD I+Y+++++ L K RLD F MG P+++T+ LI+ + + G +++ L
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 602
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF +M ++ I +Y +LI +K+G ++ A+ IF+EM SS
Sbjct: 603 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 645
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 38/279 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G S A L +++K IF P+ YN ++V + + Q+L+++L
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIF-PDLFTYNSMIVGFCSSGRWSDAEQLLQEML--E 318
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
R +S D ++ N +I AF K + +A
Sbjct: 319 RKISPD---------------------------------VVTYNALINAFVKEGKFFEAA 345
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++D + P+ ITYN ++D + R++ + F M G PD ++ TL++
Sbjct: 346 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 405
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+R+D + EM G+ + +TY LI F G++ +L L M + P I
Sbjct: 406 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 465
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+L+D L GK+ A+ +F+ M S DL F
Sbjct: 466 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPF 504
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + D ++ L F ++ + +++ ++ + +I +A+ + D +
Sbjct: 152 FTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRL 189
+P ITY ++D + + G LN M+E + ++P+ + Y+ ++++L K R
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
F EM E GI PDL TY ++I F +G ++ +L +M +++I P + Y +L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I+ K GK A +++EM
Sbjct: 332 INAFVKEGKFFEAAELYDEM 351
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 35/268 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR- 64
++ +CK G+ +A+ LL+ + + + +PN V++ SA I+ L R
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPN----VVIYSA----------IIDSLCKDGRH 271
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + + +T I D + N +I F S + A
Sbjct: 272 SDAQNLFTEMQEKGIFPD--------------------LFTYNSMIVGFCSSGRWSDAEQ 311
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + K PD++TYN +++ + G+ + + M G++P+ I+YN++++
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 371
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K RLD F M G PD+ T+T LID + I++ + L ++M ++ + +
Sbjct: 372 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 431
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LI +G ++ A+ + ++M SS
Sbjct: 432 TYNTLIHGFCLVGDLNAALDLSQQMISS 459
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N +I F ++ AL F I L PD++T+ +L L RV++ L+ F
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E P+ +++ TL+N L + R+ + M E G++P +TY ++D + G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 223 NIEESLRLFNDMKQ-QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +L L M++ I P++ +Y ++ID+L K G+ A +F EM
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N +I + +A +++ + PD ITY+ ++D L + R+++ F
Sbjct: 511 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFV 570
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
SM P+ +++NTL+N K R+D L F EMG GI D + Y LI F + G
Sbjct: 571 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 630
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
NI +L +F +M + P R+++ +++ A+ + E++ S+
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVG 682
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ ++ ++ ++ +AL F + C+P+++T+ +++ L R G
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE-SGIKPDLLTY 211
R+ + + M E G+ P I+Y T+++ + K L R+M E S I P+++ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+A+IDS + G ++ LF +M+++ I P ++ Y S+I G+ A + +EM
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K ++C D+ ++NI++ ++ L+ F + + G+ PD +++ TLL+ L R+
Sbjct: 108 KQIRC--DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L +F +M E+ +P+++T+T L++ R G I E++ L + M + ++P+ Y ++
Sbjct: 166 SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+D + K G A+ + +M
Sbjct: 226 VDGMCKKGDTVSALNLLRKM 245
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 81/158 (51%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F + + +E A+ +F + + P ++ + ++ ++ R+ R + +++ + M+ +
Sbjct: 53 GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D S+N L+ +L L F ++ + G+ PD++T+T L+ + E+L F
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + RP++ + +L++ L + G++ A+ + + M
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM 210
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 88/210 (41%), Gaps = 30/210 (14%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFL----------PN--AYN---CVLVASAET 46
CN ++ LC G + A+ + ++++ + L P+ YN C L+ +
Sbjct: 468 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 527
Query: 47 NDIDLSFQ------ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASP 100
+ + ++ I+ D + S + C + D+ TQ+ F+ + SP
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS------RLDEATQM--FVSMGSKSFSP 579
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++ N +I + K+ +++ L +F + D I Y ++ +VG +N L+
Sbjct: 580 -NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDI 638
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
F M +GV PD I+ +L L+
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGFWSKEELE 668
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N ++ L KA + A +L S++ + +L+ S D +L D +
Sbjct: 88 NVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEE 147
Query: 63 SR-TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T S+ YTN + ++ +++++ +N +I A +++ + E
Sbjct: 148 RGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTEL 207
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A IF+ +K + +++N +LD G+ G+V M+ G+ P+ I++NTL+N
Sbjct: 208 ACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLIN 267
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + + +EM +G+ PD+ TYT +I++F + GN+ ++ +F DM++
Sbjct: 268 CLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSA 327
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y LID L K G+ A I+ +M
Sbjct: 328 NVVTYNLLIDALVKAGRYQDARDIYFDM 355
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L KAGNV A+ L + K P+ YN VL + N ID + ++ + S
Sbjct: 56 IQSLVKAGNVVLAMDFLDKMI-KTGLEPDTLLYNVVLDGLGKANMIDEACKLFASM--KS 112
Query: 64 RTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+D YT R+ + + +E+ + S +I + K+ +IE
Sbjct: 113 MGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIES 172
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+++ + PD T N ++ + R GR F MK++GV + +S+N +L+
Sbjct: 173 AMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLD 232
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K ++ L + EM GIKP+ +T+ LI+ GR E+ ++ +M+ + P
Sbjct: 233 CCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTP 292
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ Y +I+ K G + A +F +M +
Sbjct: 293 DVFTYTCMIEAFAKAGNMGKAFEMFGDMEKA 323
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+ + S + +I + K+ + A+ D + +PD + YN+VLD LG+
Sbjct: 38 QELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKA 97
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
+++ FASMK G D +Y L+ +L + +R + + F EM E G P Y
Sbjct: 98 NMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAY 157
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
T +ID + + G IE ++ + M + + P Y SLI + + G+ +LA IFE M
Sbjct: 158 TNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKK 217
Query: 272 S 272
S
Sbjct: 218 S 218
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V N +I A+ +S +I K + F + KP+ TY V+ L + G V ++
Sbjct: 14 VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLD 73
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + G+ PD + YN +L+ L K +D F M G D TY LI S GR
Sbjct: 74 KMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
EE+ LF++M+++ PS Y ++ID K G+++ AM + ++M
Sbjct: 134 RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKM 180
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CKAG + +A+ +L+ + DKN+ P+ Y N ++ A + T +L+ +I + + S
Sbjct: 161 IDIYCKAGRIESAMVVLKKMLDKNL-APDDYTLNSLITAVSRTGRTELACEIFERMKKSG 219
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+++ + N ++ K+ ++ A
Sbjct: 220 VAVNT-----------------------------------VSFNAMLDCCGKAGKVGLAY 244
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
D ++ KP+ IT+N +++ LGR ++ M+ AG+ PD +Y ++
Sbjct: 245 QFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAF 304
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K + F +M ++G +++TY LID+ + G +++ ++ DMK++ I P
Sbjct: 305 AKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILP 362
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
I+ C+ ++ N V+ GR R++ +++EF + + G P+ +Y ++ +L K
Sbjct: 5 IQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGN 64
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ L + + +M ++G++PD L Y ++D G+ I+E+ +LF MK Y Y
Sbjct: 65 VVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAI 124
Query: 249 LIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
LI +L + + + A +F+EM + P
Sbjct: 125 LIRSLGRCKRDEEATLLFDEMEERGCTPSAP 155
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 139/294 (47%), Gaps = 31/294 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CK G AA++LL+ + D + PN YN ++ + + + + ++ V
Sbjct: 175 INGVCKIGETRAAIQLLRRI-DGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKG 233
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y+ F + T+ L F+ E+V A + + N ++ A K ++++A
Sbjct: 234 ISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAK 293
Query: 124 ---------------------------LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
+F+ + + PD+ +YNI+++ L ++ RV +
Sbjct: 294 NVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEE 353
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
LN + M + +VP+ ++YN+L++ L K R+ EM + G +++TY +LI+
Sbjct: 354 ALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLIN 413
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK-VDLAMTIFEEM 269
+ G +++++ L N MK Q I+P +Y L+ L GK + A +F+++
Sbjct: 414 GLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDL 467
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 85/176 (48%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ ++++ + + +I Q++KAL D + + D ++Y +++ + +
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G + + P+ + YNT+++ L K + + F EM GI +++T
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
Y+A+I F G + E+L N+M + I P +Y+Y +L+D L K GKV A +
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVL 296
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 95/208 (45%)
Query: 48 DIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVN 107
I+L+F +L +L + T + + + L F ++++ +
Sbjct: 113 QINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYG 172
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
+I K + A+ + I G +P+++ YN ++D L + V++ N F+ M
Sbjct: 173 TLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVK 232
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G+ + ++Y+ +++ + +L L + EM I PD+ Y L+D+ + G ++E+
Sbjct: 233 GISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEA 292
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+ + + ++P++ Y +LID K
Sbjct: 293 KNVLAVIVKTCLKPNVITYNTLIDGYAK 320
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 83/168 (49%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
II N+I+ +FAK + + + ++ +PD T NI+++ +G++N + +
Sbjct: 63 IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLS 122
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ + G PD ++ TL+ L ++ L + ++ G + D ++Y LI+ + G
Sbjct: 123 KILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIG 182
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+++L + + P++ +Y ++ID L K V A +F EM+
Sbjct: 183 ETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMS 230
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+ Q + + N +I KS +I A + D + ++ITYN +++ L +
Sbjct: 359 KEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKN 418
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR-KIRRLDLCLIYFREMGESGIKPDLLT 210
G+++ + MK+ G+ PD + N LL+ L K +RL F+++ + G P++ T
Sbjct: 419 GQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYT 478
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I + G ++E+ L + M+ P+ ++ +I L + G+ D A + EM
Sbjct: 479 YNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEM 537
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 77/157 (49%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ AL F + ++ P +I +N +LD ++ +++ ++ + PDF + N
Sbjct: 44 VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N + +++L ++ + G +PD +T T LI G ++++L + + Q
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
R Y +LI+ + K+G+ A+ + ++ L++
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTE 200
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCK-AGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
N YIE L K GN A+ + Q + RD+ YN ++ + + +S+++ ++
Sbjct: 232 NAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMR 291
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT AF C + E++ + + V N ++ +++++
Sbjct: 292 SHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY 351
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IF ++ + C+PD +YNI++D GR G +D F MK G+ P S+ LL
Sbjct: 352 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 411
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K R + C +EM E+G++PD ++++ +GR G + ++ +M+
Sbjct: 412 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 471
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I Y LI+ K G ++ +F E+
Sbjct: 472 ADISTYNILINIYGKAGFLERIEELFVEL 500
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I + K+ + + ++ ++ +CKP++ TY +++ R G F ++E
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ PD YN L+ + + F M G +PD +Y ++D++GR G +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +F +MK+ I P++ + L+ K V I +EM+
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A++K+R + K I + +PD N +L++ GR+G+ M A M+
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 469
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D +YN L+N K L+ F E+ E +PD++T+T+ I ++ R + L
Sbjct: 470 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 529
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+F +M P + L+ +V+ ++ M+ ++
Sbjct: 530 EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVT 575
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 101/238 (42%), Gaps = 7/238 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAET---NDIDLSFQILKD 58
N +E +AG A + ++ A YN ++ A +D + F+ +K
Sbjct: 338 NALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR 397
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
L ++ T+ S + A+ D T+ ++E+ + V+N ++ + + Q
Sbjct: 398 LGIAP-TMKS--HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ 454
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
K I ++ C D+ TYNI+++I G+ G + + F +KE PD +++ +
Sbjct: 455 FTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 514
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ + + CL F EM +SG PD T L+ + +E+ + M +
Sbjct: 515 RIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+PD+I +N+++D G+ + + + + + E+ VP +Y L+ ++ +
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 195 YFREMGESGIKPDLL---TYTALIDSF-GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
EM + P + Y A I+ R GN EE++ +F MK+ + +P+ Y +I
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ K K ++ ++ EM S
Sbjct: 272 NLYGKASKSYMSWKLYCEMRS 292
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL-- 148
I+++V+ + + ++ I+ K++ + +AL +F +KG KC+P TYN ++ +L
Sbjct: 141 IQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQ 200
Query: 149 -GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
G +V+++ NE S E PD ++Y+ L++ K+ R D + F EM E+G++P
Sbjct: 201 EGHHEKVHELYNEMCS--EVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPT 258
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
YT L+ + + G +EE+L L +M+ ++ +++ Y LI L K G+V+ A ++
Sbjct: 259 AKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYK 318
Query: 268 EM 269
M
Sbjct: 319 NM 320
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 133/277 (48%), Gaps = 14/277 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLV----ASAETNDIDLSFQIL 56
N I L ++ ++ A++L ++ N PN YN ++ A A ++ F+ +
Sbjct: 333 NNLINILGRSNHLRDAIKLFDEMKLLNC-APNVVTYNTIIKSLFEAKAPLSEASSWFERM 391
Query: 57 K-DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
K D +V S S Y+ + T+ + L+ +EE+ + P +I
Sbjct: 392 KKDGIVPS----SFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGV 447
Query: 116 SRQIEKALLIFDHIK-GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+++ + A +F +K C + Y +++ G+ GR+N+ +N F MK+ G PD
Sbjct: 448 AKRYDVANELFQELKENCGCSSARV-YAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVY 506
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YN L+ + + R+D FR M E+G PD+ ++ +++ RTG + +L +F M
Sbjct: 507 AYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKM 566
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
K I+P + + +++ L + G + A + +EM+S
Sbjct: 567 KNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSS 603
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 131/294 (44%), Gaps = 39/294 (13%)
Query: 17 AAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNF 74
+A+RL +++ N P A Y ++ + ++ + ++K++ L+ YT
Sbjct: 242 SAIRLFDEMKE-NGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTEL 300
Query: 75 ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKC 134
R + + + +++ ++++N +I +S + A+ +FD +K L C
Sbjct: 301 IRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNC 360
Query: 135 KPDLITYNIVLDILGRV-GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
P+++TYN ++ L +++ + F MK+ G+VP +Y+ L++ K R++ L
Sbjct: 361 APNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKAL 420
Query: 194 IYFREMGESGIKPDLLTYTALIDS-----------------------------------F 218
+ EM E G P Y +LI++ F
Sbjct: 421 LLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHF 480
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G+ G + E++ LFN+MK+ P +Y Y +L+ + + ++D A ++F M +
Sbjct: 481 GKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEEN 534
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 39/256 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIF-LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK V A+ LL+ + +K P AY C L+ T + + + +L +
Sbjct: 407 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY-CSLI---NTLGVAKRYDVANELF---Q 459
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
L +C + AR + + +I F K ++ +A+
Sbjct: 460 ELKENCGCSSARVYAV----------------------------MIKHFGKCGRLNEAIN 491
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ +K L C PD+ YN ++ + R R+++ + F +M+E G PD S+N +LN L
Sbjct: 492 LFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLA 551
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ L F +M S IKPD++++ ++ R G EE+ +L +M + + +
Sbjct: 552 RTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLI 611
Query: 245 VYRSLIDNLKKMGKVD 260
Y S+ L+ +GKVD
Sbjct: 612 TYSSI---LEAVGKVD 624
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I AFAK + + A+ +FD +K +P Y ++ I +VG+V + L
Sbjct: 225 VTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKE 284
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ + +Y L+ L K R++ + ++ M + G KPD++ LI+ GR+ +
Sbjct: 285 MRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNH 344
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNL-KKMGKVDLAMTIFEEM 269
+ ++++LF++MK P++ Y ++I +L + + A + FE M
Sbjct: 345 LRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERM 391
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
N II + EK +++ + + C PD +TY+ ++ ++ R + + F MK
Sbjct: 192 NSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMK 251
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
E G+ P Y TL+ K+ +++ L +EM + TYT LI G++G +E
Sbjct: 252 ENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVE 311
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + +M + +P + + +LI+ L + + A+ +F+EM
Sbjct: 312 DAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEM 355
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEA 167
+I + K+ ++EKALL+ + + P Y +++ LG V + D+ NE F +KE
Sbjct: 406 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLG-VAKRYDVANELFQELKEN 464
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
Y ++ + K RL+ + F EM + G PD+ Y AL+ R ++E+
Sbjct: 465 CGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEA 524
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LF M++ P I + +++ L + G A+ +F +M +S
Sbjct: 525 FSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNS 569
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 122/267 (45%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N ++ LCK +V A Q LR +++N ++ + ++ + ++K++
Sbjct: 234 NVLLDTLCKERSVKRARGAFQELRGSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEH 293
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S YT+ A+ M D + + E+ P ++I ++ A K+ + ++A
Sbjct: 294 GFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEA 353
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L IFD ++G C PD YN ++ ILGR GR+ D + M+ GV P ++NTL++
Sbjct: 354 LDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISA 413
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ + L +M E KPD+ TYT L+ + I+ L M ++ I P
Sbjct: 414 ACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPD 473
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+ L + GK + EEM
Sbjct: 474 FSTYTLLVTWLCRNGKPAQSCLFLEEM 500
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI----SYNTLLNNLRKI 186
+ C P ++ +V IL R G +D + F AG + SYN++++ L K
Sbjct: 116 AMDCCPVRVSDRMVDKILRRFG--SDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKF 173
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
++ DL +M E G L T T ++ +++ FN M Q +
Sbjct: 174 KQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAM 233
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNSSL 273
L+D L K V A F+E+ S+
Sbjct: 234 NVLLDTLCKERSVKRARGAFQELRGSV 260
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 126/271 (46%), Gaps = 1/271 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLL 60
C+ I + G + A + L+ + YN +L + + ILK++
Sbjct: 283 CSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEME 342
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y A++ + FI+ +++ + I +I A+ K+ + +
Sbjct: 343 KNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKED 402
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL F +K C P++ TYN +L +LG+ R+ +M++ M+ G P+ +++NT+L
Sbjct: 403 KALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTML 462
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
FREM G +P+ T+ ALI ++GR G+ + ++++ +M +
Sbjct: 463 AMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFT 522
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y +L++ L + G + A ++ +M S
Sbjct: 523 PCVTTYNALLNALARRGDWEAAESVILDMKS 553
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV-------------- 154
I+ A+++ + E+A+ +F+ ++ P L+TYN++LD+ G++GR
Sbjct: 215 ILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSN 274
Query: 155 ------------------NDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
+L+E FA +K G V +YN+LL K
Sbjct: 275 GLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEA 334
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L +EM ++ PDL+TY L+ ++ R G EE + M ++ I P+ Y ++I+
Sbjct: 335 LSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINA 394
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
K GK D A++ F +M S
Sbjct: 395 YGKAGKEDKALSFFRQMKES 414
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 16/283 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL- 59
N + L + G+ AA ++ ++ K F PN +Y+ +L A+ + +I +++
Sbjct: 529 NALLNALARRGDWEAAESVILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIY 587
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
S L + NF R +M + +E + +++ N ++ FAK
Sbjct: 588 NGHIFPSWILLRTLVLANFKRRALMGMERA-----FQEFCKHGYKPDLVLFNSMLSIFAK 642
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ ++A + I+ +PDL+TYN ++D+ R G ++++G PD +S
Sbjct: 643 NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVS 702
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNT++ + + + EM SGI+P ++TY + + G E + + M
Sbjct: 703 YNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE---EMNSSLSD 275
Q RP+ Y+ ++D K K AM EM+ S D
Sbjct: 763 QHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKSFDD 805
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 81/164 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A + +++A F +K TYN +L + G+ G ++ L+ M++
Sbjct: 286 VISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNN 345
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++YN L+ + + + M GI P+ +TYT +I+++G+ G +++L
Sbjct: 346 CPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKAL 405
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F MK+ P++ Y +++ L K +++ + + +M S+
Sbjct: 406 SFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSN 449
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+V ++ + Q AL + D I + D+ + +L R+G+ + F M
Sbjct: 176 LVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKM 235
Query: 165 KEAGVVPDFISYNTLLNNLRKI-RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ G+ P ++YN +L+ K+ R + L EM +G++ D T + +I + GR G
Sbjct: 236 RKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGL 295
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E+ + F +K + + Y SL+ K G A++I +EM
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEM 341
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 138/268 (51%), Gaps = 5/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G AA++LL+ + K + L NA YN V+ ++ ++ +F + +++
Sbjct: 180 INGLCKVGETRAALQLLRRVDGKLVQL-NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKR 238
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ Y+ R F + + +F + +++ P+ + N ++ F K +++KA
Sbjct: 239 ISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPD-VYTFNILVDGFCKEGRLKKA 297
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ D + KP++ T+N ++D + ++ + FA M + G+ P+ ++Y +L++
Sbjct: 298 KNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 357
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+++++ F M + G+ ++ +Y +I+ F + ++++++LF +M + I P
Sbjct: 358 YCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPD 417
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ Y SLID L K GK+ A + EM+
Sbjct: 418 VVTYNSLIDGLCKSGKISYAFQLVNEMH 445
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 90/179 (50%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ +++++ II +N I F QI +AL D + L D ++Y +++ L +
Sbjct: 126 LAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 185
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
VG L + V + + YNT+++ + K + ++ + EM I PD++T
Sbjct: 186 VGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVT 245
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ALI F G +++++ LFN M + I+P +Y + L+D K G++ A + + M
Sbjct: 246 YSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMM 304
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 119/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L K+ + + L Q + + I PN +N ++ + I +F +L +L
Sbjct: 72 NKILGSLVKSKHYHTVLSLSQQMEFEGIN-PNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
F + F + Q L F +++V + + +I K +
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + G + + + YN V+D + + VND + ++ M + PD ++Y+ L+
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +L + F +M IKPD+ T+ L+D F + G ++++ + + M Q I+
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ + +L+D K K+ T+F M
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMM 339
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITY--NIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
S ++ A+ +F+ + L P L + N +L L + + +L+ M+ G+ P+F
Sbjct: 46 SNDVDGAVSLFNSL--LHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNF 103
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+++N L+N ++ + ++ + G +PD++T I F G I ++L +
Sbjct: 104 VTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDK 163
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ Y +LI+ L K+G+ A+ + ++ L L
Sbjct: 164 LVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQL 206
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 29/279 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLV----------ASAETNDIDLSF 53
I+ LCK V+ A+ + ++ K I PN YN ++ ASA N++ +S
Sbjct: 52 IDSLCKDRRVNEALDIFSYMKAKGI-SPNIFTYNSLIQGLCNFSRWREASAMLNEM-MSL 109
Query: 54 QILKDLLVSSRTLSSDCYTNF---ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
I+ +++ S ++ C AR + T + ++ +++ + ++
Sbjct: 110 NIMPNIVTFSLLINIFCKEGNVFEARGVLKT------------MTEMGVEPNVVTYSSLM 157
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++ ++ +A +FD + CKPD+ +YNI+++ + R+ + F M G+
Sbjct: 158 NGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 217
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD +SYNTL++ L ++ RL F+ M +G PDL TY+ L+D F + G + ++ RL
Sbjct: 218 PDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 277
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M+ ++P++ +Y LID + K + A +F E+
Sbjct: 278 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 316
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 83/161 (51%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K + A +F + C+PD++TY+ ++D L + RVN+ L+ F+ MK G
Sbjct: 16 IINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 75
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P+ +YN+L+ L R EM I P+++T++ LI+ F + GN+ E+
Sbjct: 76 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 135
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + + P++ Y SL++ +V A +F+ M
Sbjct: 136 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 130/265 (49%), Gaps = 4/265 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC A +L + NI +PN ++ ++ + ++ + +LK +
Sbjct: 84 NSLIQGLCNFSRWREASAMLNEMMSLNI-MPNIVTFSLLINIFCKEGNVFEARGVLKTMT 142
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y++ + + + + + ++ + N +I + K+++I
Sbjct: 143 EMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 202
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +F+ + PD+++YN ++D L ++GR+ + + F +M G +PD +Y+ LL
Sbjct: 203 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 262
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K L FR M + +KP+++ Y LID+ ++ N++E+ +LF+++ Q ++
Sbjct: 263 DGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQ 322
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTI 265
P++ ++ L + K+M + + I
Sbjct: 323 PNMKHWK-LFEIWKRMAALRMNFLI 346
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G AA L + + + P+ Y+ ++ + + ++ + I +
Sbjct: 17 INGLCKIGETVAAAGLFKKMGEAGC-QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 75
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y + + + + E++ + +I+ + +I F K + +A
Sbjct: 76 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 135
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + +P+++TY+ +++ V + F M G PD SYN L+N
Sbjct: 136 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGY 195
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +R+ F EM G+ PD+++Y LID + G + E+ LF +M P +
Sbjct: 196 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 255
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y L+D K G + A +F M S+
Sbjct: 256 CTYSILLDGFCKQGYLAKAFRLFRAMQST 284
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+PD+ TY +++ L ++G F M EAG PD ++Y+T++++L K RR++ L
Sbjct: 7 QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F M GI P++ TY +LI E+ + N+M I P+I + LI+
Sbjct: 67 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126
Query: 255 KMGKVDLAMTIFEEM 269
K G V A + + M
Sbjct: 127 KEGNVFEARGVLKTM 141
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G PD +Y T++N L KI F++MGE+G +PD++TY+ +IDS +
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ E+L +F+ MK + I P+I+ Y SLI L + A + EM S
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS 108
>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
Length = 651
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 88/167 (52%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A K + + + +F+ + C + Y ++D +G+ GR + + F MK++G
Sbjct: 382 VIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALFERMKDSG 441
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ D ++Y ++N L + +LD + FR E GI + + YT+LID FG+ G +++S
Sbjct: 442 LKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSK 501
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
LF +M + P Y Y LID L K G++D A +++ M D
Sbjct: 502 ELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCD 548
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C+AG A+ L ++++ P+ Y ++ + + +++
Sbjct: 310 IKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEM--EE 367
Query: 64 RTLSSDCYTNFARAFIMTDDCT-----QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R + +D A ++ C + + E +++ + + +I + K +
Sbjct: 368 RGMGND-IPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGR 426
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++A+ +F+ +K K D +TY ++++ L R G++++ + F S +E G+ + I Y +
Sbjct: 427 EKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTS 486
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K +D F EM G PD Y LID ++G ++++ L+ M+
Sbjct: 487 LIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDG 546
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y LID L K K + A+ ++ M
Sbjct: 547 CDQTVYTYTILIDGLFKEHKNEEALKFWDAM 577
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 100/190 (52%), Gaps = 5/190 (2%)
Query: 88 LIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGL-KCKPDLITYNIVL 145
L++ + +++A E S ++ N ++ + ++ A+ +FD + + +PD+++YNI++
Sbjct: 251 LLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILI 310
Query: 146 DILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
R GR +D + + M+E A + PD ++Y TL+ +C+ F+EM E G+
Sbjct: 311 KGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGM 370
Query: 205 KPDL--LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
D+ Y +I + + G E + +F M ++ + +Y +LID++ K G+ A
Sbjct: 371 GNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEA 430
Query: 263 MTIFEEMNSS 272
M +FE M S
Sbjct: 431 MALFERMKDS 440
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG-ESGIKP 206
L +G ++L + +M+ AGV P + YN LL+ L LD + F M E ++P
Sbjct: 242 LAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRP 301
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D+++Y LI + R G +++ ++M++Q ++ P Y +L+ G + + +
Sbjct: 302 DVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGL 361
Query: 266 FEEMN 270
F+EM
Sbjct: 362 FQEME 366
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 101 ESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
E I VN I + F K+ ++++ +F+ + PD YN+++D L + GR++
Sbjct: 474 EKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMD 533
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D + M++ G +Y L++ L K + + L ++ M + GI P + L
Sbjct: 534 DACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLA 593
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+G + R+ +++ + P + +I+ L K G+
Sbjct: 594 SGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGR 635
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S +L+ +L + + L ++ M +G++P L Y L+D G ++ ++ +F+ M
Sbjct: 234 SSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAM 293
Query: 235 K-QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ Q+RP + Y LI + G+ AM EM
Sbjct: 294 STEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQ 330
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 100/233 (42%), Gaps = 8/233 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ + K G A+ L + ++D + L + Y ++ +D + +
Sbjct: 418 IDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGI 477
Query: 65 TLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+++ YT+ F M D +L F E + + P+S N +I AKS +++
Sbjct: 478 AVNAIFYTSLIDGFGKAGMVDQSKEL--FEEMIAKGFVPDSY-CYNVLIDGLAKSGRMDD 534
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ ++ C + TY I++D L + + + L + +M + G+ P ++ TL +
Sbjct: 535 ACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLAS 594
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
L + E+ G+ P+ + +I+ + G +++ +L + +
Sbjct: 595 GLCLSGKFSRACRILDELAPMGVIPE-TAHEDMINVLCKAGRFKQACKLADGI 646
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI S G EE L + M+ + PS +Y L+D L G +D A+ +F+ M
Sbjct: 234 SSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAM 293
Query: 270 NS 271
++
Sbjct: 294 ST 295
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 12/172 (6%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
IV N +I + + ++KAL I ++ + + D+ TYN + L R R+++ N
Sbjct: 243 IVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRI 302
Query: 164 MKEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M E GV P+ +SY TL++ ++ + RRL FREM +G +P L+TY ++D
Sbjct: 303 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRL------FREMAGNGAEPSLVTYNVMMDG 356
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + G+I E+ R N+M+++ + P IY Y +L+ GKVD+A+ +FEEM
Sbjct: 357 YIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEM 408
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CK G + AA L+ ++ + + + +N ++ N +D + +I +++
Sbjct: 214 INGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI--KMIMEKM 271
Query: 65 TLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D YT RA M + L I IE+ V+ P + I +
Sbjct: 272 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVR---PNHVSYTTLISIHCNEGDM 328
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E A +F + G +P L+TYN+++D + G + + M++ G+VPD SY
Sbjct: 329 VE-ARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 387
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ ++D+ L F EM + G KP+L+ YTALI + G EE+ +L+++M
Sbjct: 388 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 447
Query: 239 IRPSIYVYRSLIDNLK 254
+ P +Y +L+ +L
Sbjct: 448 LTPDDALYSALVGSLH 463
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK+G V+ A +LL + + + NA YN +L A D D ++LK +
Sbjct: 74 VDGYCKSGRVAHARQLLDEMPRHGVKV-NALCYNSLLDAYTREKDDDRVAEMLKVMENEG 132
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT D T++ EE+ + + +I A+ ++ + +A
Sbjct: 133 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 192
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD G +P+ TY +++ ++G++ M+ GV + I +NT+++
Sbjct: 193 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 252
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +D L M + GI+ D+ TY L R ++E+ L M ++ +RP+
Sbjct: 253 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 312
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI G + A +F EM
Sbjct: 313 VSYTTLISIHCNEGDMVEARRLFREM 338
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 113/260 (43%), Gaps = 2/260 (0%)
Query: 12 AGNVSAAVRLLQSLRDK--NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AG++ A LL+ + P + + V+ ++ + + Q+L ++ +++
Sbjct: 44 AGHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 103
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
CY + A+ D ++ ++ + ++ ++ + +R I K +F+ +
Sbjct: 104 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 163
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K D+ Y+ V++ R G V F G+ P+ +Y L+N KI ++
Sbjct: 164 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 223
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + +M G+ + + + +ID + R ++++L + M++ I +Y Y +L
Sbjct: 224 EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTL 283
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
L++ ++D A + M
Sbjct: 284 ACGLRRANRMDEAKNLLRIM 303
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G + D+L + A+ V P +S + +++ K R+ EM G+K +
Sbjct: 45 GHLDTAADLLKQAATSCPDSVTP--LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 102
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
L Y +L+D++ R + + + M+ + I P++ Y L+D L + +FEE
Sbjct: 103 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 162
Query: 269 MNS 271
M S
Sbjct: 163 MKS 165
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 9/253 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G V A L + ++ I +PN Y+ ++ +T ++D + ++L+ ++
Sbjct: 157 NALIDGFSKEGEVDKAHDLFYKMEEQGI-MPNVVTYSSLINGLCKTKEMDKAERVLRQMV 215
Query: 61 ---VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
V ++ +C + M + + +F E + P+ + N + A K
Sbjct: 216 GAGVRPNNMTYNCLIHGYSTSGMWKESVR--VFKEMSSSLLVPD-VGNCNSFMTALCKHG 272
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+I++A IFD + KPD+I+Y +L G + M N F M GVVPD +N
Sbjct: 273 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 332
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL+N ++ +D L+ F +M + G+ PD++T++ +I +F R G +++++ FN M
Sbjct: 333 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 392
Query: 238 QIRPSIYVYRSLI 250
+ P VY LI
Sbjct: 393 GVPPDTAVYSCLI 405
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 8/188 (4%)
Query: 96 QIASPE---SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ A PE +I N +I + ++R+ + L +F + PD+ +YN ++D + G
Sbjct: 108 RCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEG 167
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V+ + F M+E G++P+ ++Y++L+N L K + +D R+M +G++P+ +TY
Sbjct: 168 EVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYN 227
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LI + +G +ES+R+F +M + P + S + L K G++ A IF+ M
Sbjct: 228 CLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMV-- 285
Query: 273 LSDLAGPK 280
L GPK
Sbjct: 286 ---LKGPK 290
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 74/306 (24%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN ++ LCK G + A + S +V D+ +S+ L
Sbjct: 261 CNSFMTALCKHGRIKEARDIFDS---------------MVLKGPKPDV-ISYGALLHGYA 304
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ ++ D+ +++ E VV P+ V N +I A+A+ ++K
Sbjct: 305 TAGCIAG------------MDNLFNVMV-CEGVV----PDR-HVFNTLINAYARLGMMDK 346
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+LL+F+ + PD+IT++ V+ R+GR++D + +F M + GV PD Y+ L+
Sbjct: 347 SLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQ 406
Query: 182 NLRKIRRLDL------------------CLIYFREM-------G-------------ESG 203
+ R DL C+ +F + G +G
Sbjct: 407 G--QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 464
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+P+L+T+ +L+D + GN++E++ L + M+ + P IY Y +L+D K G++D A+
Sbjct: 465 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 524
Query: 264 TIFEEM 269
T+F +M
Sbjct: 525 TLFRDM 530
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 130/308 (42%), Gaps = 45/308 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I C+ G + A+ + D + A Y+C++ D+ + +++ D+L S+
Sbjct: 370 ISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML--SK 427
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ C F I+ + C + + ++ ++ ++I N ++ + +
Sbjct: 428 GIPPPCIKFFTS--IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 485
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A+ + D ++ + +PD+ TYN ++D + GR++D L F M V +SYN +
Sbjct: 486 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 545
Query: 180 LNNLRKIRRLDLCLIYFREMGESG-----------------------------------I 204
L+ L + RR + F EM ESG +
Sbjct: 546 LHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV 605
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
K D+LT+ +I + + G +E+ LF + + P+I YR +I NL K + A
Sbjct: 606 KFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADN 665
Query: 265 IFEEMNSS 272
+F M S
Sbjct: 666 LFSSMEKS 673
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 86/168 (51%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + +I K+++++KA + + G +P+ +TYN ++ G + + F
Sbjct: 187 NVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVF 246
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + +VPD + N+ + L K R+ F M G KPD+++Y AL+ +
Sbjct: 247 KEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATA 306
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G I LFN M + + P +V+ +LI+ ++G +D ++ +FE+M
Sbjct: 307 GCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 354
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 8/259 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A R+L+ + + PN YNC++ + + S ++ K++ SS
Sbjct: 195 INGLCKTKEMDKAERVLRQMVGAGV-RPNNMTYNCLIHGYSTSGMWKESVRVFKEM--SS 251
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L D +F A + + +V +I ++ +A + I
Sbjct: 252 SLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAG 311
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+F+ + PD +N +++ R+G ++ L F M + GV PD I+++T+++
Sbjct: 312 MDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVIS 371
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
++ RLD + F M ++G+ PD Y+ LI ++ ++ L +DM + I P
Sbjct: 372 AFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPP 431
Query: 242 S-IYVYRSLIDNLKKMGKV 259
I + S+I+NL K G+V
Sbjct: 432 PCIKFFTSIINNLCKEGRV 450
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 3/241 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C GN+ AV LL S+ + P+ YN ++ + ID + + +D+L
Sbjct: 473 NSLVDGYCLVGNMKEAVGLLDSMESVGV-EPDIYTYNTLVDGYCKHGRIDDALTLFRDML 531
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
TL+S Y E+++ SI ++ ++ +
Sbjct: 532 HKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTD 591
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++ + + + K D++T+NIV+ + +VGR + FA++ G+VP ++Y ++
Sbjct: 592 EANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMI 651
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
NL K + F M +S PD +I G + ++ + + ++ I
Sbjct: 652 TNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGIL 711
Query: 241 P 241
P
Sbjct: 712 P 712
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 9/255 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G V A L + ++ I +PN Y+ ++ +T ++D + ++L+ ++
Sbjct: 228 NALIDGFSKEGEVDKAHDLFYKMEEQGI-MPNVVTYSSLINGLCKTKEMDKAERVLRQMV 286
Query: 61 ---VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
V ++ +C + M + + +F E + P+ + N + A K
Sbjct: 287 GAGVRPNNMTYNCLIHGYSTSGMWKESVR--VFKEMSSSLLVPD-VGNCNSFMTALCKHG 343
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+I++A IFD + KPD+I+Y +L G + M N F M GVVPD +N
Sbjct: 344 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 403
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL+N ++ +D L+ F +M + G+ PD++T++ +I +F R G +++++ FN M
Sbjct: 404 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 463
Query: 238 QIRPSIYVYRSLIDN 252
+ P VY LI
Sbjct: 464 GVPPDTAVYSCLIQG 478
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 8/188 (4%)
Query: 96 QIASPE---SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ A PE +I N +I + ++R+ + L +F + PD+ +YN ++D + G
Sbjct: 179 RCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEG 238
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V+ + F M+E G++P+ ++Y++L+N L K + +D R+M +G++P+ +TY
Sbjct: 239 EVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYN 298
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
LI + +G +ES+R+F +M + P + S + L K G++ A IF+ M
Sbjct: 299 CLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMV-- 356
Query: 273 LSDLAGPK 280
L GPK
Sbjct: 357 ---LKGPK 361
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 74/306 (24%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
CN ++ LCK G + A + S +V D+ +S+ L
Sbjct: 332 CNSFMTALCKHGRIKEARDIFDS---------------MVLKGPKPDV-ISYGALLHGYA 375
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ ++ D+ +++ E VV P+ V N +I A+A+ ++K
Sbjct: 376 TAGCIAG------------MDNLFNVMV-CEGVV----PDR-HVFNTLINAYARLGMMDK 417
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+LL+F+ + PD+IT++ V+ R+GR++D + +F M + GV PD Y+ L+
Sbjct: 418 SLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQ 477
Query: 182 NLRKIRRLDL------------------CLIYFREM-------G-------------ESG 203
+ R DL C+ +F + G +G
Sbjct: 478 G--QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+P+L+T+ +L+D + GN++E++ L + M+ + P IY Y +L+D K G++D A+
Sbjct: 536 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 595
Query: 264 TIFEEM 269
T+F +M
Sbjct: 596 TLFRDM 601
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 130/308 (42%), Gaps = 45/308 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I C+ G + A+ + D + A Y+C++ D+ + +++ D+L S+
Sbjct: 441 ISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML--SK 498
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ C F I+ + C + + ++ ++ ++I N ++ + +
Sbjct: 499 GIPPPCIKFFTS--IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 556
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A+ + D ++ + +PD+ TYN ++D + GR++D L F M V +SYN +
Sbjct: 557 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 616
Query: 180 LNNLRKIRRLDLCLIYFREMGESG-----------------------------------I 204
L+ L + RR + F EM ESG +
Sbjct: 617 LHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV 676
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
K D+LT+ +I + + G +E+ LF + + P+I YR +I NL K + A
Sbjct: 677 KFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADN 736
Query: 265 IFEEMNSS 272
+F M S
Sbjct: 737 LFSSMEKS 744
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 86/169 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + +I K+++++KA + + G +P+ +TYN ++ G + + F
Sbjct: 258 NVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVF 317
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + +VPD + N+ + L K R+ F M G KPD+++Y AL+ +
Sbjct: 318 KEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATA 377
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G I LFN M + + P +V+ +LI+ ++G +D ++ +FE+M
Sbjct: 378 GCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 8/259 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A R+L+ + + PN YNC++ + + S ++ K++ SS
Sbjct: 266 INGLCKTKEMDKAERVLRQMVGAGV-RPNNMTYNCLIHGYSTSGMWKESVRVFKEM--SS 322
Query: 64 RTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L D +F A + + +V +I ++ +A + I
Sbjct: 323 SLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAG 382
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+F+ + PD +N +++ R+G ++ L F M + GV PD I+++T+++
Sbjct: 383 MDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVIS 442
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
++ RLD + F M ++G+ PD Y+ LI ++ ++ L +DM + I P
Sbjct: 443 AFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPP 502
Query: 242 S-IYVYRSLIDNLKKMGKV 259
I + S+I+NL K G+V
Sbjct: 503 PCIKFFTSIINNLCKEGRV 521
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 3/241 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C GN+ AV LL S+ + P+ YN ++ + ID + + +D+L
Sbjct: 544 NSLVDGYCLVGNMKEAVGLLDSMESVGV-EPDIYTYNTLVDGYCKHGRIDDALTLFRDML 602
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
TL+S Y E+++ SI ++ ++ +
Sbjct: 603 HKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTD 662
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A ++ + + + K D++T+NIV+ + +VGR + FA++ G+VP ++Y ++
Sbjct: 663 EANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMI 722
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
NL K + F M +S PD +I G + ++ + + ++ I
Sbjct: 723 TNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGIL 782
Query: 241 P 241
P
Sbjct: 783 P 783
>gi|260780506|gb|ACX50799.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780508|gb|ACX50800.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780510|gb|ACX50801.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780512|gb|ACX50802.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780514|gb|ACX50803.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780516|gb|ACX50804.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780518|gb|ACX50805.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780520|gb|ACX50806.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780522|gb|ACX50807.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780524|gb|ACX50808.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780526|gb|ACX50809.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780528|gb|ACX50810.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780530|gb|ACX50811.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780532|gb|ACX50812.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780534|gb|ACX50813.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780536|gb|ACX50814.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780538|gb|ACX50815.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780540|gb|ACX50816.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780542|gb|ACX50817.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780544|gb|ACX50818.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780550|gb|ACX50821.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780552|gb|ACX50822.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780554|gb|ACX50823.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780556|gb|ACX50824.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780560|gb|ACX50826.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780562|gb|ACX50827.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780564|gb|ACX50828.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780566|gb|ACX50829.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780568|gb|ACX50830.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780570|gb|ACX50831.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780572|gb|ACX50832.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780574|gb|ACX50833.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780576|gb|ACX50834.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780578|gb|ACX50835.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780580|gb|ACX50836.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780582|gb|ACX50837.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780584|gb|ACX50838.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780586|gb|ACX50839.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780588|gb|ACX50840.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780590|gb|ACX50841.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780592|gb|ACX50842.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780594|gb|ACX50843.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780596|gb|ACX50844.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780598|gb|ACX50845.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780600|gb|ACX50846.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780602|gb|ACX50847.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780604|gb|ACX50848.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780606|gb|ACX50849.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780608|gb|ACX50850.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780610|gb|ACX50851.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780612|gb|ACX50852.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780614|gb|ACX50853.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780616|gb|ACX50854.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780618|gb|ACX50855.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780620|gb|ACX50856.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780622|gb|ACX50857.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780624|gb|ACX50858.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 183
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ + +F+++ KP++ Y +++D + G V D + M + G
Sbjct: 13 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEG 72
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++++ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I+E+
Sbjct: 73 FKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAE 132
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RLF +M ++ Y Y +LID K GKVD AMT+F+ M
Sbjct: 133 RLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 85/147 (57%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++T+++V++ L +
Sbjct: 31 ENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKN 90
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 91 GRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 150
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ 238
ALID+F + G ++E++ LF M++++
Sbjct: 151 NALIDAFTKHGKVDEAMTLFKRMEEEE 177
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/170 (17%), Positives = 75/170 (44%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P+A++ V+ + ++ + + ++++ + YT + + + + +
Sbjct: 7 PHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLH 66
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ + ++ K+ ++E+AL F + + + Y+ ++D LG+ G
Sbjct: 67 RMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAG 126
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
R+++ F M E G D YN L++ K ++D + F+ M E
Sbjct: 127 RIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEEE 176
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 126/271 (46%), Gaps = 1/271 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLL 60
C+ I + G + A + L+ + YN +L + + ILK++
Sbjct: 283 CSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEME 342
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y A++ + FI+ +++ + I +I A+ K+ + +
Sbjct: 343 KNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKED 402
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL F +K C P++ TYN +L +LG+ R+ +M++ M+ G P+ +++NT+L
Sbjct: 403 KALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTML 462
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
FREM G +P+ T+ ALI ++GR G+ + ++++ +M +
Sbjct: 463 AMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFT 522
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y +L++ L + G + A ++ +M S
Sbjct: 523 PCVTTYNALLNALARRGDWEAAESVILDMKS 553
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 36/200 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR----VNDMLNE---- 160
I+ A+++ + E+A+ +F+ ++ P L+TYN++LD+ G++GR + +L+E
Sbjct: 215 ILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSN 274
Query: 161 ----------------------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
FA +K G V +YN+LL K
Sbjct: 275 GLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEA 334
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L +EM ++ PDL+TY L+ ++ R G EE + M ++ I P+ Y ++I+
Sbjct: 335 LSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINA 394
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
K GK D A++ F +M S
Sbjct: 395 YGKAGKEDKALSFFRQMKES 414
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 16/283 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL- 59
N + L + G+ AA ++ ++ K F PN +Y+ +L A+ + +I +++
Sbjct: 529 NALLNALARRGDWEAAESVILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIY 587
Query: 60 ----LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
S L + NF R +M + +E + +++ N ++ FAK
Sbjct: 588 NGHIFPSWILLRTLVLANFKRRALMGMERA-----FQEFCKHGYKPDLVLFNSMLSIFAK 642
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
++ ++A + I+ +PDL+TYN ++D+ R G ++++G PD +S
Sbjct: 643 NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVS 702
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNT++ + + + EM SGI+P ++TY + + G E + + M
Sbjct: 703 YNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE---EMNSSLSD 275
Q RP+ Y+ ++D K K AM EM+ S D
Sbjct: 763 QHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKSFDD 805
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 81/164 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A + +++A F +K TYN +L + G+ G ++ L+ M++
Sbjct: 286 VISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNN 345
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++YN L+ + + + M GI P+ +TYT +I+++G+ G +++L
Sbjct: 346 CPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKAL 405
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F MK+ P++ Y +++ L K +++ + + +M S+
Sbjct: 406 SFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSN 449
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+V ++ + Q AL + D I + D+ + +L R+G+ + F M
Sbjct: 176 LVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKM 235
Query: 165 KEAGVVPDFISYNTLLNNLRKI-RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
++ G+ P ++YN +L+ K+ R + L EM +G++ D T + +I + GR G
Sbjct: 236 RKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGL 295
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E+ + F +K + + Y SL+ K G A++I +EM
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEM 341
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 130/282 (46%), Gaps = 23/282 (8%)
Query: 3 NGYIEKLCKAGNVSAAVR----LLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N + LCKAG+V A+ +LQ D +++ YN V+ + ++ + ++L
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY---TYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS--------PESIIVVNRII 110
++ + ++ Y + +EE ++A P+ + N +I
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQ-------VEEATELARVLTSKGILPD-VCTFNSLI 407
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
+R A+ +F+ ++ C+PD TYN+++D L G++++ LN M+ +G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
I+YNTL++ K + F EM G+ + +TY LID ++ +E++ +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ M + +P Y Y SL+ + + G + A I + M S+
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 37/269 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N + CK G V A+ +Q + +++ F P+ Y N ++ + + + +I+ +L
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
D YT N +I K +++
Sbjct: 323 --QEGYDPDVYT---------------------------------YNSVISGLCKLGEVK 347
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + D + C P+ +TYN ++ L + +V + + G++PD ++N+L+
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L R + + F EM G +PD TY LIDS G ++E+L + M+
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S+ Y +LID K K A IF+EM
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEM 496
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 5/263 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G V AV +L + ++ PN YN ++ + N ++ + ++ + +L
Sbjct: 334 NSVISGLCKLGEVKEAVEVLDQMITRDCS-PNTVTYNTLISTLCKENQVEEATELAR-VL 391
Query: 61 VSSRTLSSDC-YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S L C + + + +T + + EE+ N +I + ++
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++AL + ++ C +ITYN ++D + + + F M+ GV + ++YNTL
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K RR++ +M G KPD TY +L+ F R G+I+++ + M
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 240 RPSIYVYRSLIDNLKKMGKVDLA 262
P I Y +LI L K G+V++A
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVA 594
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK V A L + L K I LP+ +N ++ T + ++ ++ +++
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGI-LPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + L ++++ S+I N +I F K+ +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IFD ++ + +TYN ++D L + RV D M G PD +YN+LL
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + + M +G +PD++TY LI + G +E + +L ++ + I
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + Y +I L + K A+ +F EM
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 1/239 (0%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
+ +N ++ A + + + +L+D+ +T + +I D L E+
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK-PDLITYNIVLDILGRVG 152
+V+ S + VN I+ F K ++E AL + PD T+N +++ L + G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V + M + G PD +YN++++ L K+ + + +M P+ +TY
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LI + + +EE+ L + + I P + + SLI L +AM +FEEM S
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 4/248 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LC N A+ L + +R K P+ YN ++ + +D + +LK +
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S S Y F + + +E+ + + N +I KSR++E
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + D + KPD TYN +L R G + + +M G PD ++Y TL+
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQI 239
+ L K R+++ R + GI Y +I R E++ LF +M +Q +
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 240 RPSIYVYR 247
P YR
Sbjct: 643 PPDAVSYR 650
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 120/293 (40%), Gaps = 39/293 (13%)
Query: 16 SAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTN 73
SAA+RL K F P Y +L+ + D +IL+D+ S + + +
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 74 FARAFIMTDDCTQLLIFIEEVV-QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
++ + ++L ++ ++ + NR++ ++ + +
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF------------------- 173
KPD+ T+N+++ L R ++ + M G+VPD
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 174 ----------------ISYNTLLNNLRKIRRLDLCLIYFREMG-ESGIKPDLLTYTALID 216
+S N +++ K R++ L + +EM + G PD T+ L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G+++ ++ + + M Q+ P +Y Y S+I L K+G+V A+ + ++M
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 95/179 (53%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+V ++I N +I A + ++A F + G PD++T+ ++D L +
Sbjct: 138 DEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKK 197
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G+V + F M + G P+ ++YN+LLN L ++D + F M E GIK D+++Y
Sbjct: 198 GKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISY 257
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
LI+ + +G EE++ LF M+ +++ PSI Y L+ L + G++ A +F M
Sbjct: 258 NTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQ 316
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 90/167 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I++ +I A K+RQ +A+ + + C + TY +V+D L + G L F
Sbjct: 44 ILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFR 103
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G+ P+ I Y++L+N L ++ +L + F EM GIK +++TY +LI + R G
Sbjct: 104 EMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFG 163
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ R F+ M + I P + + +LID+L K GKV A IFE M
Sbjct: 164 LWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELM 210
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
Query: 64 RTLSSDCYTNFARAFIMTDD------CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
R LS C NF ++ D + L E++ + ++IV + +I +
Sbjct: 69 RMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVG 128
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A+ +FD + K ++ITYN ++ R G + F+ M G++PD +++
Sbjct: 129 KLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFT 188
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL+++L K ++ F M + G P+++TY +L++ ++ ++RLF M ++
Sbjct: 189 TLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVER 248
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I+ + Y +LI+ GK + AMT+F +M
Sbjct: 249 GIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQ 281
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 21/275 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC+ G + AV L + + I YN ++ AS F + K+ ++R
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCR-------FGLWKE---ATR 170
Query: 65 TLSS----------DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
T S +T + E +++ +I+ N ++
Sbjct: 171 TFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLC 230
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
Q++ A+ +F+ + K D+I+YN +++ G+ + + F M+ + P
Sbjct: 231 LHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSIT 290
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y LL L + R+ F M G P L TYT L+D + G IEE++ +F +
Sbjct: 291 TYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSL 350
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
K + +PSI +Y LI + + + + AM IF+E+
Sbjct: 351 KSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEI 385
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ +I +K ++++A IF+ + P+++TYN +L+ L +++ + F
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M E G+ D ISYNTL+N + + + FR+M + P + TYT L+ + + G
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I + LFN+M+ PS+ Y L+D L K G ++ A+ +F + S
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKS 352
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 118/272 (43%), Gaps = 3/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+ G A R + + I LP+ + ++ ++ + +++I + ++
Sbjct: 153 NSLIHASCRFGLWKEATRTFSQMVGEGI-LPDVVTFTTLIDHLSKKGKVQEAYKIFELMI 211
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + + E +V+ +I N +I + S + E
Sbjct: 212 KQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTE 271
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F ++ + P + TY I+L L + GR+ F +M+ G P +Y LL
Sbjct: 272 EAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLL 331
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K ++ + FR + KP + Y+ LI + E ++ +F+++ +
Sbjct: 332 DGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLV 391
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+I Y +I+ L K GK+ A +F +M S
Sbjct: 392 PNIVTYNIMINGLCKEGKLLEAERLFVQMEES 423
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+P+L+T + ++ + G+V D L F M +G D + Y L+N LRK R+ +
Sbjct: 6 QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
R M + TY +IDS + G + L++F +M I P++ VY SLI+ L
Sbjct: 66 LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125
Query: 255 KMGKVDLAMTIFEEMNSS 272
++GK+ A+ +F+EM S
Sbjct: 126 RVGKLREAVNLFDEMVSQ 143
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 116/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K G V A ++ + L K PN YN +L + +D + ++ + ++
Sbjct: 191 IDHLSKKGKVQEAYKIFE-LMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERG 249
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + + + ++ SI ++ A ++ +I A
Sbjct: 250 IKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAK 309
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F++++ P L TY ++LD L + G + + ++ F S+K P Y+ L+ +
Sbjct: 310 ELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGM 369
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ RR + + F E+ G+ P+++TY +I+ + G + E+ RLF M++
Sbjct: 370 FQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDE 429
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +I + +V AM + M
Sbjct: 430 ISFNFIIRGFLQENQVQKAMEFLKRM 455
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC + AVRL + + ++ I + +YN ++ + + + + + +
Sbjct: 223 NSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQY 282
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T S YT +A + S+ ++ K+ IE+
Sbjct: 283 EELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEE 342
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ +F +K +K KP + Y+I++ + + R + F + G+VP+ ++YN ++N
Sbjct: 343 AIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMIN 402
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K +L F +M ESG + D +++ +I F + +++++ M+++ P
Sbjct: 403 GLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSP 462
Query: 242 S 242
+
Sbjct: 463 N 463
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+SG +P+L+T + L+ G + ++L LF+ M + + I +Y LI+ L+K +
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 261 LAMTIFEEMNSSL 273
A+ + M S +
Sbjct: 62 RAVELHRRMLSEI 74
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 102/179 (56%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ + ++ ++I N ++ ++ ++ +A +FD + CKPD+ +Y+I+++
Sbjct: 324 LKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCM 383
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
V R+++ F M G+ P+ +SY TL++ ++ +L F++M +G PDL T
Sbjct: 384 VKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCT 443
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ L++ F + G + ++ RLF M+ ++P++ +Y LID++ K G ++ A +F E+
Sbjct: 444 YSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSEL 502
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ +V+++ +II +I K+ + +AL +FD + C+PD+ TY +++ L +
Sbjct: 149 LAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCK 208
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+G M E G PD ++Y+TL+++L K R ++ L F M GI P +++
Sbjct: 209 MGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVS 268
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
YT+LI +E+ + N+M I P I + LID K G V A + + M
Sbjct: 269 YTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMT 328
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%)
Query: 47 NDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
+DL F +L ++ + +T + Q L +++V +
Sbjct: 140 QHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTY 199
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
II K + A + + + C+PD++TY+ ++D L + VN+ L+ F+ MK
Sbjct: 200 TTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKA 259
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ P +SY +L+ L R EM I PD++T++ LID F + GN+ E
Sbjct: 260 KGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLE 319
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + M + + P++ Y SL+ +V A +F+ M
Sbjct: 320 AQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP + +N +I F + ++ + + L +P +IT+ +++ L + G L
Sbjct: 123 SPNTC-TLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQAL 181
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M G PD +Y T++N L K+ ++MGE G +PD++TY+ LIDS
Sbjct: 182 ELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSL 241
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + E+L +F+ MK + I P++ Y SLI L + A + EM S
Sbjct: 242 CKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTS 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK GNV A +L+++ + + PN YN ++ + ++ + + L D++++
Sbjct: 308 IDIFCKEGNVLEAQGVLKTMTEMGV-EPNVITYNSLMHGYSLQMEV-VEARKLFDVMIT- 364
Query: 64 RTLSSDC--YTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R D Y+ + M D+ QL F E + Q +P ++ +I AF + +
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQL--FNEMIHQGLTPNTVSYTT-LIHAFCQLGK 421
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A +F + PDL TY+++L+ + G + F +M+ + P+ + Y
Sbjct: 422 LREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTI 481
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++++ K L+ F E+ G++PD+ YT +I+ + G ++E+L F M++
Sbjct: 482 LIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDG 541
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ + Y +I + A+ + EM
Sbjct: 542 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 572
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%)
Query: 49 IDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
ID + Q+ +++ T ++ YT AF + +++ + +
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ F K + KA +F ++G KP+L+ Y I++D + + G +N F+ + G
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD Y T++N L K LD L FR+M E G P+ +Y +I F + + ++
Sbjct: 507 LQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 566
Query: 229 RLFNDMKQQ 237
+L +M+ +
Sbjct: 567 QLIGEMRDK 575
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 49/106 (46%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++++ +I + KS + A +F + +PD+ Y +++ L + G +++ L F
Sbjct: 475 NLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAF 534
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
M+E G P+ SYN ++ + + + EM + G D
Sbjct: 535 RKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K+R+ A+ + + +KG CK D+ TY +++D L + G + L+ F+ M AG
Sbjct: 1057 LINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAG 1115
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
++PD + Y++L++ L + RL L +F+EM GI D+ TY +LI R G +E
Sbjct: 1116 ILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVT 1175
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N M + P + + LID L K GKV A I E M
Sbjct: 1176 WFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 1216
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 24/278 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK---NIFLPNAYNCVLVA----SAETNDIDL-----SF 53
I LCKA A++L + ++ ++F Y ++ A T +D+
Sbjct: 1058 INGLCKARKTGLAIKLHEKMKGNCKGDVF---TYGMIIDALCKDGMTTEALDMFSEMIGA 1114
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
IL D++V S + C F R + L F +E+ + N +I
Sbjct: 1115 GILPDVVVYSSLMDGLC--RFGRL-------KEALEFFKEMEGRGISADVYTYNSLIHGL 1165
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+++ ++ + + PD T+ I++D L + G+V + M+ G PD
Sbjct: 1166 SRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDI 1225
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YNTL+N L + +L+ F + + GIK ++ +Y LI+ + + I+E+ R F +
Sbjct: 1226 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEE 1285
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M+ + ++PS Y +LI L + G+V A +F EM +
Sbjct: 1286 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 1323
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 115/243 (47%), Gaps = 7/243 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + LC G + A +L +SL D+ I L +YN ++ + ID +F+ +++
Sbjct: 1229 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRP 1288
Query: 62 SSRTLSSDCYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S+ Y A + +L + ++ Q + V ++ K+
Sbjct: 1289 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV---LLDGLCKNGH 1345
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A+ +F IK + KP++ ++I+LD + R G++ + +F + + G+ PD I+YN
Sbjct: 1346 LEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 1405
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L L + +M E G PD +T+ +I + + I E+++L +M+ +
Sbjct: 1406 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 1465
Query: 239 IRP 241
P
Sbjct: 1466 FSP 1468
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 90/168 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ N ++ Q+E A +F+ + K ++ +YNI+++ + ++++ F
Sbjct: 1225 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFE 1284
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+ G+ P ++YNTL+ L + R+ F EM G L TY L+D + G
Sbjct: 1285 EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 1344
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++EE++ LF +K+ + +P+I V+ L+D + + GK++ A F+E++
Sbjct: 1345 HLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 1392
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 114/269 (42%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
N I L +AG L + D+ F P+A+ ++ + + + QIL+ +
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVDRG-FSPDAFTFTILIDGLCKEGKVGEAQQILELMR 1217
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + E + ++ N +I + K ++I+
Sbjct: 1218 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 1277
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A F+ ++ KP +TYN ++ L + GRV F M+ G +Y LL
Sbjct: 1278 EAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K L+ + F+ + ++ KP++ ++ L+D R G +EE+ + F+++ + +
Sbjct: 1338 DGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y LI+ L G + A+ + +M
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQM 1426
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ A+ +FD + P T+N +L + ++G + + + + + G+ PD + N
Sbjct: 926 KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ +R + F + G +PD +T T L+ I ++++LF++M ++
Sbjct: 986 ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ Y LI+ L K K LA+ + E+M +
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN 1080
>gi|260780546|gb|ACX50819.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 182
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ + +F+++ KP++ Y +++D + G V D + M + G
Sbjct: 12 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEG 71
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++++ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I+E+
Sbjct: 72 FKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAE 131
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RLF +M ++ Y Y +LID K GKVD AMT+F+ M
Sbjct: 132 RLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 172
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 85/147 (57%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++T+++V++ L +
Sbjct: 30 ENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKN 89
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 90 GRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 149
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ 238
ALID+F + G ++E++ LF M++++
Sbjct: 150 NALIDAFTKHGKVDEAMTLFKRMEEEE 176
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 54/93 (58%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+++ ++ L K +L+ F M G KP++ YT LID + ++GN+E+++RL + M
Sbjct: 8 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 67
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ +P + + +++ L K G+V+ A+ F+
Sbjct: 68 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQ 100
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/169 (17%), Positives = 75/169 (44%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P+A++ V+ + ++ + + ++++ + YT + + + + +
Sbjct: 6 PHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLH 65
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ + ++ K+ ++E+AL F + + + Y+ ++D LG+ G
Sbjct: 66 RMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAG 125
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
R+++ F M E G D YN L++ K ++D + F+ M E
Sbjct: 126 RIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 174
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 5/260 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ CK G + A +L+ + K L YN ++ A + I + + ++ SS+
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEM--SSK 481
Query: 65 TLSSDCYTNFARAFIM--TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
D +T + F + D+ L ++V + + N +I AF + +I++A
Sbjct: 482 GCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEA 541
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L + + + C D ITYN ++ L + G V L F M G+ P I+ N L+N
Sbjct: 542 LKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILING 601
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
++ L + R+M G PD++TY +LI+ + G I+E+L LF ++ + I+P
Sbjct: 602 FCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPD 661
Query: 243 IYVYRSLIDNLKKMGKVDLA 262
Y +LI L + G D A
Sbjct: 662 SITYNTLICWLCREGAFDDA 681
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK----NIFLPNAYNCVLVASAETNDIDLSFQILKD 58
N I LCK G + A+ + + K +IF +N ++ ++++ + + +D
Sbjct: 456 NALISALCKHGKIHEALDMFGEMSSKGCKPDIF---TFNSLIFGLCRVDEMEDALALYRD 512
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+++ +S + AF+ + + L + +++ P I N +I A K+
Sbjct: 513 MVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGA 572
Query: 119 IEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+EK L +F+ + KGL P +IT NI+++ G+V++ L M G PD ++Y
Sbjct: 573 VEKGLGLFEEMIRKGLT--PSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTY 630
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L+N L K R+ L F ++ GI+PD +TY LI R G +++ L +
Sbjct: 631 NSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVE 690
Query: 237 QQIRPSIYVYRSLIDNLKK 255
P+ + L+ N K
Sbjct: 691 NGFVPNDVTWNILVYNFGK 709
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK G +A+ L+ + K PN Y ++ + ++ + IL+++L
Sbjct: 389 VNGLCKKGLFGSALELVNDMDAKGC-KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKG 447
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+L++ Y A + L E+ I N +IF + ++E AL
Sbjct: 448 FSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDAL 507
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + + +T+N ++ R G + + L M G D I+YN L+ L
Sbjct: 508 ALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKAL 567
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ L F EM G+ P ++T LI+ F G + +L DM + P I
Sbjct: 568 CKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDI 627
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y SLI+ L K G++ A+ +FE++ +
Sbjct: 628 VTYNSLINGLCKRGRIQEALNLFEKLQA 655
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 33 PNAYNCVLVASA--ETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN Y LV A N++D + +L+D+ +S Y A D + L
Sbjct: 208 PNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKL 267
Query: 91 IEEVVQIASPESIIVVNRIIFAFAK-SRQIEKALLI--------------FDHIKGLKCK 135
+EE+ + P + N +I+ F + +R +E A L+ + ++ CK
Sbjct: 268 LEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCK 327
Query: 136 ----------------PDLITYNIVLDILGRVGRVNDMLN-EFASMKEAGVVPDFISYNT 178
P+++ +N +++ R GR+N+ + M G VPD +++T
Sbjct: 328 TCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFST 387
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K L +M G KP+L TYT LID F + G +EE+ + +M +
Sbjct: 388 LVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKG 447
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y +LI L K GK+ A+ +F EM+S
Sbjct: 448 FSLNTVGYNALISALCKHGKIHEALDMFGEMSS 480
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 3/225 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I LC+ + A+ L + + + + + +N ++ A +I + +++ D+L
Sbjct: 491 NSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLF 550
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L Y +A T + L EE+++ SII N +I F + ++
Sbjct: 551 RGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHN 610
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL + PD++TYN +++ L + GR+ + LN F ++ G+ PD I+YNTL+
Sbjct: 611 ALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLIC 670
Query: 182 NL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
L R+ D C + +R + E+G P+ +T+ L+ +FG+ N E
Sbjct: 671 WLCREGAFDDACFLLYRGV-ENGFVPNDVTWNILVYNFGKQSNSE 714
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 40/296 (13%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
+AG A RLL ++ P+ +YN VL N ++ + D+L S+ +S
Sbjct: 151 RAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDML--SKGVSP 208
Query: 69 DCYTNFA---RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ YT F +A M ++ + + ++ + + ++ +I A +K ++++AL +
Sbjct: 209 NDYT-FGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKL 267
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRV-----------------NDM--------LNE 160
+ + + C PD+ T+N V+ R+ RV NDM L +
Sbjct: 268 LEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCK 327
Query: 161 FASMKEAGVV------PDFISYNTLLNNLRKIRRLDLCLIY-FREMGESGIKPDLLTYTA 213
+ EA + P+ + +NTL+N + RL+ + + +M +G PD+ T++
Sbjct: 328 TCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFST 387
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L++ + G +L L NDM + +P++ Y LID K G+++ A I EM
Sbjct: 388 LVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCK-AGNVSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
N YIE L K GN A+ + Q + RD+ YN ++ + + +S+++ ++
Sbjct: 254 NAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMR 313
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT AF C + E++ + + V N ++ +++++
Sbjct: 314 SHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY 373
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IF ++ + C+PD +YNI++D GR G +D F MK G+ P S+ LL
Sbjct: 374 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 433
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K R + C +EM E+G++PD ++++ +GR G + ++ +M+
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 493
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I Y LI+ K G ++ +F E+
Sbjct: 494 ADISTYNILINIYGKAGFLERIEELFVEL 522
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I + K+ + + ++ ++ +CKP++ TY +++ R G F ++E
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ PD YN L+ + + F M G +PD +Y ++D++GR G +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +F +MK+ I P++ + L+ K V I +EM+ +
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 455
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A++K+R + K I + +PD N +L++ GR+G+ M A M+
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 491
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
D +YN L+N K L+ F E+ E +PD++T+T+ I ++ R + L
Sbjct: 492 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 551
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+F +M P + L+ +V+ ++ M+ ++
Sbjct: 552 EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVT 597
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 101/238 (42%), Gaps = 7/238 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAET---NDIDLSFQILKD 58
N +E +AG A + ++ A YN ++ A +D + F+ +K
Sbjct: 360 NALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR 419
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
L ++ T+ S + A+ D T+ ++E+ + V+N ++ + + Q
Sbjct: 420 LGIAP-TMKS--HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ 476
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
K I ++ C D+ TYNI+++I G+ G + + F +KE PD +++ +
Sbjct: 477 FTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 536
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ + + CL F EM +SG PD T L+ + +E+ + M +
Sbjct: 537 RIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+PD+I +N+++D G+ + + + + + E+ VP +Y L+ ++ +
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 195 YFREMGESGIKPDLL---TYTALIDSF-GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
EM + P + Y A I+ R GN EE++ +F MK+ + +P+ Y +I
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ K K ++ ++ EM S
Sbjct: 294 NLYGKASKSYMSWKLYCEMRS 314
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 131/271 (48%), Gaps = 5/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC---VLVASAETNDIDLSFQILKDL 59
N I L + A ++ +S+ N+ LP+ C V+V + ++Q + +
Sbjct: 264 NAAISGLLSSARYEDAWKVYESMEADNV-LPDHVTCSIMVIVMRKLGHSAKDAWQFFEKM 322
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ ++F + ++ LI + E+ + + IV N ++ A+ KS ++
Sbjct: 323 NGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRV 382
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A +F +K KP T+NI++ R + + A M+E G+ P+ SY +
Sbjct: 383 EEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCI 442
Query: 180 LNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ K + + D+ F +M + GIKP +YTALI ++ +G E++ F +M+++
Sbjct: 443 ISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREG 502
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+PSI Y +L+D ++ G M I++ M
Sbjct: 503 IKPSIETYTALLDAFRRAGDTQTLMKIWKLM 533
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 114/273 (41%), Gaps = 4/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N ++ CK+ V A L ++ K I A +N ++ A + ++ +++ ++
Sbjct: 370 NTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQE 429
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLI--FIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ ++ YT A+ + + + F++ P S +I A++ S
Sbjct: 430 TGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSH-SYTALIHAYSVSGWH 488
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKA F++++ KP + TY +LD R G ++ + M+ V +++NTL
Sbjct: 489 EKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTL 548
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K + G+ P ++TY L++++ R G + L +M +
Sbjct: 549 VDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAAHNL 608
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+P Y ++I ++ A +EM S
Sbjct: 609 KPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKS 641
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
++Y ++ A + + + ++ +++ S + YT AF D TQ L+ I +
Sbjct: 473 HSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGD-TQTLMKIWK 531
Query: 94 VVQIASPESI-IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+++ E + N ++ FAK ++A + + P ++TYN++++ R G
Sbjct: 532 LMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGG 591
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R + + M + PD ++Y+T++ ++R Y +EM +SG D+ +Y
Sbjct: 592 RHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKSGQVMDVDSYQ 651
Query: 213 AL 214
L
Sbjct: 652 KL 653
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Query: 99 SPESIIVVNR---IIFAF-AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
S E +V R ++F K++ +K +++F ++ + D YN + L R
Sbjct: 217 SQEPSLVTPRACTVLFPLLGKAKMGDKLMVLFTNLPSSREFRDSHVYNAAISGLLSSARY 276
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKI-RRLDLCLIYFREMGESGIKPDLLTYTA 213
D + SM+ V+PD ++ + ++ +RK+ +F +M G+K A
Sbjct: 277 EDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGA 336
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LI SF G + E+L + ++++++ + + VY +L+D K +V+ A +F EM +
Sbjct: 337 LIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKT 394
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 1/169 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR-VNDMLNEFAS 163
V N I S + E A +++ ++ PD +T +I++ ++ ++G D F
Sbjct: 262 VYNAAISGLLSSARYEDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEK 321
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M GV L+ + + LI E+ + G+ + + Y L+D++ ++
Sbjct: 322 MNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNR 381
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+EE+ LF +MK + I+P+ + L+ + + ++ + EM +
Sbjct: 382 VEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQET 430
>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 102/180 (56%), Gaps = 3/180 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N +I + K+ +I+KA +++ + PD +TYN ++ L ++GR+ + + F
Sbjct: 29 VFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLGRLREAQDLFK 88
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+M + G +PD +Y+ LL+ L K L FR M S +KPDL+ Y L+D+ ++G
Sbjct: 89 NMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSG 148
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
N++++ LF+++ + ++P++ +Y ++I+ L K G +D A+ F M D P +F
Sbjct: 149 NLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME---EDGCPPDEF 205
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 87/160 (54%)
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
++ ++ ++ +A +FD + KPD+ YNI+++ + R++ + M G+
Sbjct: 1 MYGYSLCMEVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGL 60
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
PD ++YNTL++ L ++ RL F+ M ++G PDL Y+ L+D + G + ++ R
Sbjct: 61 TPDKVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFR 120
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LF M+ ++P + +Y L+D + K G + A +F E+
Sbjct: 121 LFRAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSEL 160
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
++ E ++Q +P+ + N +I + ++ +A +F ++ PDL Y+I+LD L
Sbjct: 51 LYNEMILQGLTPDKV-TYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGL 109
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G + F +M+ + + PD + YN L++ + K L F E+ G++P++
Sbjct: 110 CKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNV 169
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
YT +I+ + G ++E+L F +M++ P + Y +I + A+ + E
Sbjct: 170 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGE 229
Query: 269 M 269
M
Sbjct: 230 M 230
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ + ID + Q+ ++++ T Y + + +
Sbjct: 32 YNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLGRLREAQDLFKNMH 91
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + + + ++ K + KA +F ++ KPDL+ YNI++D + + G +
Sbjct: 92 KNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSGNLK 151
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D F+ + G+ P+ Y T++N L K LD L FR M E G PD +Y +I
Sbjct: 152 DARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVII 211
Query: 216 DSFGRTGNIEESLRLFNDMKQQ 237
F + + ++ L +M+ +
Sbjct: 212 RGFLQHKDESRAVHLIGEMRDR 233
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F M G PD YN L+N K R+D + EM G+ PD +TY LI +
Sbjct: 17 FDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQ 76
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G + E+ LF +M + P ++ Y L+D L K G + A +F M SS
Sbjct: 77 LGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSS 128
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+++ N ++ A KS ++ A +F +KGL+ P++ Y +++ L + G +++ L
Sbjct: 134 LVMYNILVDAMCKSGNLKDARELFSELFVKGLQ--PNVQIYTTIINGLCKEGLLDEALEA 191
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
F +M+E G PD SYN ++ + + + EM + G D+ T T
Sbjct: 192 FRNMEEDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFIADVGTTT 243
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 104/191 (54%)
Query: 79 IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDL 138
I ++ + F E+++ P + N +I F K I A LIF+ I+ +P
Sbjct: 199 INSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTT 258
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+++N +++ L + +++ +M+E + PD +Y+ L++ L K RLD+ F E
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDE 318
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M + G++P+ +T+TALID R+ I+ ++ ++ M ++P + +Y +L++ L K+G
Sbjct: 319 MQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 259 VDLAMTIFEEM 269
V+ A + +EM
Sbjct: 379 VNKARKLVDEM 389
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK+ N+ RL +++ + I+ P+ Y+ ++ + +D++ Q+ ++
Sbjct: 262 NTLINGLCKSRNLDEGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ 320
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +T + + +++ + +++ N ++ K +
Sbjct: 321 QRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN 380
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA + D ++ + KPD ITY ++D + G + + M E GVV D +++ L+
Sbjct: 381 KARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALI 440
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + R+ REM E+G+KPD TYT +ID + + GN++ +L +M+ +
Sbjct: 441 SGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHK 500
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y L++ L K G++ A + E M
Sbjct: 501 PGVITYNVLMNGLCKQGQMKNANMLLEAM 529
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I K CK G++ A + +R + + ++N ++ ++ ++D F++ K +
Sbjct: 230 INKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTM--EEN 287
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ D +T + ++ C + + +E+ Q + I +I +SR+I
Sbjct: 288 RIYPDVFT---YSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRI 344
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A+ + + + KPDL+ YN +L+ L +VG VN M+ G+ PD I+Y TL
Sbjct: 345 DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTL 404
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K L+ + + M E G+ D + +TALI F R G + ++ R +M + +
Sbjct: 405 IDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P Y +ID K G V + + +EM
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 99/257 (38%), Gaps = 3/257 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G + A +L ++ + + PN + ++ + ID + +L
Sbjct: 300 IHGLCKEGRLDVAEQLFDEMQQRGL-RPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMG 358
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y D + ++E+ + I +I + K +E A+
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAM 418
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + D + + ++ R GRV D M EAG+ PD +Y +++
Sbjct: 419 EIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGY 478
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + + +EM +G KP ++TY L++ + G ++ + L M + P
Sbjct: 479 CKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDD 538
Query: 244 YVYRSLIDNLKKMGKVD 260
Y L++ K GK +
Sbjct: 539 ITYNILLEGHCKNGKAE 555
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 6/223 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M N + LCK G+V+ A +L+ +R + P+ Y ++ + D++ + +I K
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMRMVGM-KPDKITYTTLIDGYCKEGDLESAMEIRKG 423
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ L + +T F + E+V+ +I + K
Sbjct: 424 MNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGN 483
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ + ++ KP +ITYN++++ L + G++ + +M GV PD I+YN
Sbjct: 484 VKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNI 543
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
LL K + + L + E G+ D YT+L+ + ++
Sbjct: 544 LLEGHCKNGKAEDLL---KLRNEKGLIVDYAYYTSLVSEYNKS 583
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN +L + D++ + +++ ++ + YT + D + E+
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAM----EIR 421
Query: 96 QIASPESIIVVN----RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+ + E +++ N +I F + ++ A + KPD TY +V+D +
Sbjct: 422 KGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKK 481
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G V M+ G P I+YN L+N L K ++ + M G+ PD +TY
Sbjct: 482 GNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITY 541
Query: 212 TALIDSFGRTGNIEESLRLFND 233
L++ + G E+ L+L N+
Sbjct: 542 NILLEGHCKNGKAEDLLKLRNE 563
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLL- 60
N I LCK VS AV + +SL K + C LV + Q++ +++
Sbjct: 264 NVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVE 323
Query: 61 --VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S + + R DD +L++ +V + ++ V N +I + K
Sbjct: 324 LGFSPTEAAVSGLVDGLRKQGKIDDAYELVV---KVGRFGFVPNLFVYNALINSLCKGGD 380
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++KA L++ ++ + +P+ ITY+I++D R GR++ ++ F M + G+ +YN+
Sbjct: 381 LDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N K L F EM G++P T+T+LI + + ++++ +L+N M
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I P++Y + +LI L K+ A +F+E+
Sbjct: 501 ITPNVYTFTALISGLCSTNKMAEASELFDEL 531
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 87/169 (51%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ ++ F + +Q E + + D + L P + ++D L + G+++D
Sbjct: 295 VVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVV 354
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ G VP+ YN L+N+L K LD + + M ++P+ +TY+ LIDSF R+G
Sbjct: 355 KVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSG 414
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ ++ F+ M Q I ++Y Y SLI+ K G + A ++F EM +
Sbjct: 415 RLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN 463
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 131/281 (46%), Gaps = 23/281 (8%)
Query: 1 MC-NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-ETNDIDLSFQILKD 58
MC + + C+ G + A+ + + I + + VL+ A + D F +LKD
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670
Query: 59 LLVSSRTLSSDCYTN----------FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
+ + YT+ F +AF +C L++ EE +++
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAF----ECWDLMV-TEECFP-----NVVTYTA 720
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ K+ ++++A L+F ++ P+ ITY LD L + G + + + +M + G
Sbjct: 721 LMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-G 779
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
++ + +++N ++ K+ R EM E+GI PD +TY+ LI + R+GN+ S+
Sbjct: 780 LLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV 839
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L++ M + + P + Y LI G++D A + ++M
Sbjct: 840 KLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDM 880
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 121/270 (44%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+G ++ L K G + A L+ + + F+PN YN ++ + + D+D + + ++
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKV-GRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMS 392
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + Y+ +F + + + + ++Q E++ N +I K +
Sbjct: 393 LMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLS 452
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + +P T+ ++ + +V + M + G+ P+ ++ L+
Sbjct: 453 AAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALI 512
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L ++ F E+ E IKP +TY LI+ + R G I+++ L DM Q+ +
Sbjct: 513 SGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLV 572
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P Y YR LI L G+V A ++++
Sbjct: 573 PDTYTYRPLISGLCSTGRVSKAKDFIDDLH 602
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDL--SFQILKDLL 60
N I CK G++SAA L + +K + P A + S D+ + +F++ ++
Sbjct: 439 NSLINGQCKFGDLSAAESLFIEMTNKGV-EPTATTFTSLISGYCKDLQVQKAFKLYNKMI 497
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T + +T T+ + +E+V+ + + N +I + + +I+
Sbjct: 498 DNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKID 557
Query: 121 KALLIFD--HIKGLKCKPDLITYNIVLDILGRVGRV-------------NDMLNEFA--- 162
KA + + H KGL PD TY ++ L GRV N LNE
Sbjct: 558 KAFELLEDMHQKGLV--PDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSA 615
Query: 163 -------------------SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
M + G+ D + + L++ K ++M + G
Sbjct: 616 LLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQG 675
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
++PD + YT++ID++ + G+ +++ ++ M ++ P++ Y +L++ L K G++D A
Sbjct: 676 LRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAG 735
Query: 264 TIFEEMNSS 272
+F+ M ++
Sbjct: 736 LLFKRMQAA 744
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/303 (17%), Positives = 121/303 (39%), Gaps = 42/303 (13%)
Query: 6 IEKLCKAGNVSAAV----RLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I+ C++G + A+ R++Q + ++ AYN ++ + D+ + + ++
Sbjct: 407 IDSFCRSGRLDVAISYFDRMIQDGIGETVY---AYNSLINGQCKFGDLSAAESLFIEMTN 463
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ +T+ + + +++ ++ +I + ++ +
Sbjct: 464 KGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAE 523
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD + K KP +TYN++++ R G+++ M + G+VPD +Y L++
Sbjct: 524 ASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLIS 583
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR------------ 229
L R+ + ++ + +K + + Y+AL+ + + G + E+L
Sbjct: 584 GLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINM 643
Query: 230 -----------------------LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
L DM Q +RP +Y S+ID K G A +
Sbjct: 644 DLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECW 703
Query: 267 EEM 269
+ M
Sbjct: 704 DLM 706
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 71/133 (53%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
++TYN+++ L + RV++ + S+ G+ D ++Y TL+ ++++ + +
Sbjct: 260 IVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMD 319
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
EM E G P + L+D + G I+++ L + + P+++VY +LI++L K G
Sbjct: 320 EMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGG 379
Query: 258 KVDLAMTIFEEMN 270
+D A ++ M+
Sbjct: 380 DLDKAELLYSNMS 392
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC ++ A L L ++ I P YN ++ ID +F++L+D+
Sbjct: 512 ISGLCSTNKMAEASELFDELVERKI-KPTEVTYNVLIEGYCRDGKIDKAFELLEDM--HQ 568
Query: 64 RTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ L D YT T ++ FI+++ + + + + ++ + + ++ +
Sbjct: 569 KGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLME 628
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL + DL+ + +++D + + M + G+ PD + Y ++++
Sbjct: 629 ALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMID 688
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K + M P+++TYTAL++ + G ++ + LF M+ + P
Sbjct: 689 TYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPP 748
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y +DNL K G + A+ + M
Sbjct: 749 NSITYGCFLDNLTKEGNMKEAIGLHHAM 776
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
PE + ++ ++ K R+ +FD +PD T + V+ + +
Sbjct: 188 PE-VRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKE 246
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M+ G ++YN L++ L K R+ + R +G G+ D++TY L+ F
Sbjct: 247 KIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFC 306
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
R E ++L ++M + P+ L+D L+K GK+D A
Sbjct: 307 RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDA 349
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+KGL + +T+NI++ ++GR ++ + M E G+ PD ++Y+TL+ +
Sbjct: 777 LKGLL--ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGN 834
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ + + M G++PDL+ Y LI G ++++ L +DM ++ I P
Sbjct: 835 VGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 44/104 (42%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N II F K + +A + + PD +TY+ ++ R G V + + +
Sbjct: 785 VTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDT 844
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
M G+ PD ++YN L+ LD +M GI PD
Sbjct: 845 MLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
>gi|260780468|gb|ACX50780.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780484|gb|ACX50788.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ + +F+++ KP++ Y +++D + G V D + M + G
Sbjct: 23 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEG 82
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++++ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I+E+
Sbjct: 83 FKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAE 142
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RLF +M ++ Y Y +LID K GKVD AMT+F+ M
Sbjct: 143 RLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 183
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++T+++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVY 246
ALID+F + G ++E++ LF M++++ ++Y Y
Sbjct: 161 NALIDAFTKHGKVDEAMTLFKRMEEEEGCDQTVYTY 196
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 54/93 (58%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+++ ++ L K +L+ F M G KP++ YT LID + ++GN+E+++RL + M
Sbjct: 19 AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 78
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ +P + + +++ L K G+V+ A+ F+
Sbjct: 79 IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQ 111
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 19 VRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARA 77
V L Q + +K I +P +A++ V+ + ++ + + ++++ + YT
Sbjct: 2 VALYQEMDEKRIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
+ + + + + ++ ++ + ++ K+ ++E+AL F + +
Sbjct: 62 YAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAIN 121
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+ Y+ ++D LG+ GR+++ F M E G D YN L++ K ++D + F+
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFK 181
Query: 198 EM-GESGIKPDLLTYTAL 214
M E G + TYT L
Sbjct: 182 RMEEEEGCDQTVYTYTIL 199
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E I+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKRIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGNVEDAIRLLHRM 78
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 96/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+ + +++ NRII A+ ++ + +A+ +F+ ++ +PD +TY ++DI
Sbjct: 388 LLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHA 447
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G + ++ + M+E G+ PD +Y+ ++N L K L F EM E+G P+L+
Sbjct: 448 KGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLV 507
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N E ++L+ DM+ RP Y +++ L G +D A +F EM
Sbjct: 508 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 567
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 85/161 (52%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++RQ + D + + CKP ++TYN ++ GR + + + F M++AG
Sbjct: 372 MIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAG 431
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K L++ + + M E G+ PD TY+A+++ G+ G++ +
Sbjct: 432 YEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAY 491
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LF +M + P++ Y +I K + + ++++M
Sbjct: 492 KLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDM 532
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP++ + ++ K + A +F + C P+L+TYNI++ + + +++
Sbjct: 468 SPDTF-TYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVV 526
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ M+ AG PD I+Y+ ++ L LD F EM PD Y L+D +
Sbjct: 527 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RHDWAPDEPVYGLLVDLW 585
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ GN++++L ++ M Q ++P++ SL+ K+ + A ++ + M
Sbjct: 586 GKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNM 636
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 124 LIFDHI------KGLKCKP----DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
L+ DH + LK +P D +Y ++ ILG+ + M M P
Sbjct: 342 LLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTV 401
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YN +++ + L + F EM ++G +PD +TY LID + G +E ++ L+
Sbjct: 402 VTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTR 461
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M++ + P + Y ++++ L K G + A +F EM
Sbjct: 462 MQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEM 497
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 108 RIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDM---LNEFAS 163
R + + + Q K + + H+ L CK D N VL +L +D L F
Sbjct: 302 RSVEQYYHTLQQMKWVPMTGHVLDNLHCKIDAFQANQVLKLL------HDHTIALGFFQW 355
Query: 164 MK-EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K + G D SY T++ L + R+ EM KP ++TY +I ++GR
Sbjct: 356 LKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRAN 415
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E++++F +M++ P Y +LID K G +++AM ++ M
Sbjct: 416 YLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRM 462
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 34/157 (21%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG--- 149
E+V+ +++ N +I AK+R E + ++ ++ +PD ITY+IV+++LG
Sbjct: 496 EMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCG 555
Query: 150 -------------------------------RVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ G V+ L + +M + G+ P+ + N+
Sbjct: 556 HLDEAEAVFIEMRHDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNS 615
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
LL+ KI R + M G+ P L TYT L+
Sbjct: 616 LLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLL 652
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ +A++R++++A+ F+ + K DL YN ++DIL + +V F MK G
Sbjct: 194 IVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKG 253
Query: 169 -VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+PD +Y L+ + L + ++EM ++GIKPD++ Y LI +F ++G +E+
Sbjct: 254 RFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEA 313
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+++F++M++ PS +VY LI+ L M ++D A+ F+
Sbjct: 314 IKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQ 353
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 108/236 (45%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AY ++ A ++ D + ++ ++ S S Y + + L + +
Sbjct: 296 AYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLS 355
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ P + N +I A+ ++ + A + D ++ P+ TY+I+L+ L + ++
Sbjct: 356 KESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKI 415
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ N F M+ G P+ +Y ++ R+D+ L +++M E G+ P + ++AL
Sbjct: 416 EEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSAL 475
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I+ +EE+ F +M + IRP ++ +L + L + G++ LA + + +
Sbjct: 476 INGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS-DCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ +++ + + I K++ R + YT + D L +E+
Sbjct: 226 YNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM 285
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ ++ +I AF KS + ++A+ +F ++ C P Y ++++ LG + R+
Sbjct: 286 LDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERL 345
Query: 155 NDMLNEFA-----------------------------------SMKEAGVVPDFISYNTL 179
++ L F M+++G+ P+ +Y+ +
Sbjct: 346 DEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDII 405
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
LN+L K +++ F+ M G +P+L TYT ++ F ++ +L+++ MK++ +
Sbjct: 406 LNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGV 465
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P ++++ +LI+ L +++ A F+EM
Sbjct: 466 LPCMHMFSALINGLCFENRLEEACVYFQEM 495
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI--TYNIVLDILGRVGRVNDMLNEFASM 164
+ +I A K +Q L++ ++ ++C+ L T+ I++ R +V + + F M
Sbjct: 158 HNLIEALGKIKQFR---LVWSLVEAMRCRSCLSKDTFKIIVRRYARARKVKEAVETFEKM 214
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGN 223
G+ D YN L++ L K +++ F+EM G PDL TYT L++ +G +
Sbjct: 215 SSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKD 274
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ +M I+P + Y LI K GK D A+ +F EM S
Sbjct: 275 LLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEES 323
>gi|341605721|gb|AEK82963.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605821|gb|AEK83013.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LI G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIXGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L+ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSMFYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|125532572|gb|EAY79137.1| hypothetical protein OsI_34244 [Oryza sativa Indica Group]
Length = 508
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 13/278 (4%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
M N ++ + G + A RLL+ + DK + + + +LV ++ + + L +
Sbjct: 185 MYNLILKIFAECGELKAMWRLLEDMTDKGLPVSSRTFHLLVCTSGRAGLR---RRLVERF 241
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ--IA---SPESII--VVNRIIFAF 113
+ S + + N A + T + IE V Q IA SP+ + VV R +
Sbjct: 242 IKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGHSPDVLTYNVVMRAKYML 301
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
K Q K L D + PDL TYN++L +LG+ + LN M + G VP
Sbjct: 302 GKLNQFHKLL---DEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALNLLNYMSDVGCVPTV 358
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
+ + L++ L + L+ C +F EM + G +PD++ YT +I + G +E+ + F+D
Sbjct: 359 LHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGEFDEAQKFFDD 418
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + P++Y Y S+I L +G+ D A ++ ++M S
Sbjct: 419 MLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMES 456
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 4/283 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIF----LPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+C +G RL++ + F N++N +L L + + ++
Sbjct: 225 VCTSGRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGH 284
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y RA M Q ++E+ + + N ++ K + AL
Sbjct: 285 SPDVLTYNVVMRAKYMLGKLNQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALN 344
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ +++ + C P ++ + ++D L R G + F M + G PD + Y ++
Sbjct: 345 LLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYV 404
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
D +F +M G P++ TY ++I G +++ L DM+ + P+
Sbjct: 405 AAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFT 464
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
VY +L+ L+ GK A I + M + L F+R R
Sbjct: 465 VYSTLVSRLRNAGKDSEANNIIQYMTNKGHYLHLLSRFRRYRR 507
>gi|260780426|gb|ACX50759.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780428|gb|ACX50760.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780432|gb|ACX50762.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780434|gb|ACX50763.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780436|gb|ACX50764.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780438|gb|ACX50765.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780440|gb|ACX50766.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780442|gb|ACX50767.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780444|gb|ACX50768.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780446|gb|ACX50769.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780448|gb|ACX50770.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780450|gb|ACX50771.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780452|gb|ACX50772.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780454|gb|ACX50773.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780456|gb|ACX50774.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780458|gb|ACX50775.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780460|gb|ACX50776.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780462|gb|ACX50777.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780464|gb|ACX50778.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780466|gb|ACX50779.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780470|gb|ACX50781.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780472|gb|ACX50782.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780474|gb|ACX50783.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780476|gb|ACX50784.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780478|gb|ACX50785.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780480|gb|ACX50786.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780482|gb|ACX50787.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780486|gb|ACX50789.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780488|gb|ACX50790.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780490|gb|ACX50791.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780492|gb|ACX50792.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780494|gb|ACX50793.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780498|gb|ACX50795.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780500|gb|ACX50796.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780502|gb|ACX50797.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780504|gb|ACX50798.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ + +F+++ KP++ Y +++D + G V D + M + G
Sbjct: 23 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEG 82
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++++ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I+E+
Sbjct: 83 FKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAE 142
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RLF +M ++ Y Y +LID K GKVD AMT+F+ M
Sbjct: 143 RLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 183
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++T+++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSL 249
ALID+F + G ++E++ LF M++++ ++Y Y L
Sbjct: 161 NALIDAFTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTIL 199
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 59/107 (55%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ M E G+ +++ ++ L K +L+ F M G KP++ YT LID + +
Sbjct: 5 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+GN+E+++RL + M + +P + + +++ L K G+V+ A+ F+
Sbjct: 65 SGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQ 111
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 19 VRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARA 77
V L Q + +K I +P +A++ V+ + ++ + + ++++ + YT
Sbjct: 2 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
+ + + + + ++ ++ + ++ K+ ++E+AL F + +
Sbjct: 62 YAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAIN 121
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+ Y+ ++D LG+ GR+++ F M E G D YN L++ K ++D + F+
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFK 181
Query: 198 EM-GESGIKPDLLTYTAL 214
M E G + TYT L
Sbjct: 182 RMEEEEGCDQTVYTYTIL 199
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGNVEDAIRLLHRM 78
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 1/182 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKS-RQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F + + +I P ++ +N +I A ++ ++ L IF + C PD TY ++ L
Sbjct: 143 FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGL 202
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R GR+++ F M E P ++Y +L+N L + +D + Y EM GI+P++
Sbjct: 203 CRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNV 262
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY++L+D + G +++ LF M + RP++ Y +LI L K K+ A+ + +
Sbjct: 263 FTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR 322
Query: 269 MN 270
MN
Sbjct: 323 MN 324
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Query: 92 EEVVQIASPESIIVVNRIIFA----FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
E++V E+ +V I+ + + + + +L +F +K C P Y VL I
Sbjct: 71 EDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAI 130
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGESGIKP 206
L ++N + +M+E G+ P S N L+ L R +D L F EM + G P
Sbjct: 131 LVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDP 190
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
D TY LI R G I+E+ +LF +M ++ P++ Y SLI+ L VD AM
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYV 250
Query: 267 EEMNS 271
EEM
Sbjct: 251 EEMKG 255
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 3/237 (1%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQ--LLIFIE 92
AY VL E N ++L+F+ K++ + +A D L IF E
Sbjct: 123 AYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHE 182
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ P+S +I + +I++A +F + C P ++TY +++ L
Sbjct: 183 MPKRGCDPDSY-TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSK 241
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V++ + MK G+ P+ +Y++L++ L K R + F M G +P+++TYT
Sbjct: 242 NVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI + I+E++ L + M Q ++P +Y +I + K A +EM
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEM 358
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 39 VLVASAETND--IDLSFQILKDLLVSSRTLSSDCYT------NFARAFIMTDDCTQLLIF 90
VL+ + ND +D +I ++ R D YT R F D+ +L F
Sbjct: 161 VLIKALCRNDGTVDAGLKIFHEM--PKRGCDPDSYTYGTLISGLCR-FGRIDEAKKL--F 215
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
E V + +P +++ +I S+ +++A+ + +KG +P++ TY+ ++D L +
Sbjct: 216 TEMVEKDCAP-TVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCK 274
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GR + F M G P+ ++Y TL+ L K +++ + M G+KPD
Sbjct: 275 DGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL 334
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
Y +I F E+ ++M I P+
Sbjct: 335 YGKVISGFCAVSKFREAANFLDEMILGGITPN 366
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/276 (17%), Positives = 116/276 (42%), Gaps = 10/276 (3%)
Query: 3 NGYIEKLCKA-GNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDL 59
N I+ LC+ G V A +++ + + P++Y + S ID + ++ ++
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFHEMPKRGCD-PDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + YT+ + + + + ++EE+ ++ + ++ K +
Sbjct: 219 VEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRS 278
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A+ +F+ + C+P+++TY ++ L + ++ + + M G+ PD Y +
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR------TGNIEESLRLFND 233
++ + + + EM GI P+ LT+ + + T + L+
Sbjct: 339 ISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLS 398
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M+ + I + SL+ L K G+ A+ + +E+
Sbjct: 399 MRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEI 434
>gi|260780548|gb|ACX50820.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 183
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ + +F+++ KP++ Y +++D + G V D + M + G
Sbjct: 13 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEG 72
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++++ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I+E+
Sbjct: 73 FKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAE 132
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RLF +M ++ Y Y +LID K GKVD AMT+F+ M
Sbjct: 133 RLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 85/147 (57%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++T+++V++ L +
Sbjct: 31 ENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKN 90
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 91 GRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 150
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ 238
ALID+F + G ++E++ LF M++++
Sbjct: 151 NALIDAFTKHGKVDEAMTLFKRMEKEE 177
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/167 (16%), Positives = 74/167 (44%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P+A++ V+ + ++ + + ++++ + YT + + + + +
Sbjct: 7 PHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLH 66
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ + ++ K+ ++E+AL F + + + Y+ ++D LG+ G
Sbjct: 67 RMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAG 126
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
R+++ F M E G D YN L++ K ++D + F+ M
Sbjct: 127 RIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 37/273 (13%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
+ YN ++ A A + I+ D+ ++ S Y N A + + L ++
Sbjct: 189 DTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKK 248
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ + +I N ++ AF Q KA+ F+ +K K PD T NIV+ L +V
Sbjct: 249 MTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVAL 308
Query: 154 VNDMLNEFASMKE-------------------------------------AGVVPDFISY 176
+ + F SM+E GV P+ +SY
Sbjct: 309 YGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSY 368
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N LL L F+ + ++G KPD+++YT+L++++GR+ E++ +FN+M++
Sbjct: 369 NALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRK 428
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P+ Y +LID G + A+++ EM
Sbjct: 429 NACKPNKVSYNALIDAYGSAGMLKEAISLLHEM 461
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ ++ A+ +S EKA +F+ ++ CKP+ ++YN ++D G G + + ++
Sbjct: 400 IVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLH 459
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M++ G+ PD IS +TLL + R+ I GI+ + + Y + I S+ G
Sbjct: 460 EMEQDGIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLG 519
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+ +++L L+ M+ ++P Y LI K+G
Sbjct: 520 DYKKALELYTSMRTGNVKPDAVTYNILISGSCKLG 554
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A+ Q+++A +F ++ +CKPD TYN ++ R G+ +N M+ A
Sbjct: 159 MIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAA 218
Query: 169 VVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ P +YN ++N N +K L+LC ++M E+G+ PDL+T+ ++ +F
Sbjct: 219 IPPSRTTYNNVINACGAAGNWKKA--LELC----KKMTENGVGPDLITHNIVLSAFKNGA 272
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ F MK ++ P +I L K+ A+ +F M
Sbjct: 273 QYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSM 319
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P+ V+ +I A K + + + +F+ + C + Y ++D +G+ GR + +
Sbjct: 330 PQHAYVL--VIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMA 387
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F MK++G+ D ++Y ++N L + +LD + FR E GI + + YT+LID FG
Sbjct: 388 LFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFG 447
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ G +++S LF +M + P Y Y LID L K G++D A +++ M D
Sbjct: 448 KAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCD 503
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C+AG A+ L ++++ P+ Y ++ + + +++
Sbjct: 265 IKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEM--EE 322
Query: 64 RTLSSDCYTNFARAFIMTDDCT-----QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R + +D A ++ C + + E +++ + + +I + K +
Sbjct: 323 RGMGND-IPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGR 381
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++A+ +F+ +K K D +TY ++++ L R G++++ + F S +E G+ + I Y +
Sbjct: 382 EKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTS 441
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K +D F EM G PD Y LID ++G ++++ L+ M+
Sbjct: 442 LIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDG 501
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y LID L K K + A+ ++ M
Sbjct: 502 CDQTVYTYTILIDGLFKEHKNEEALKFWDAM 532
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 100/190 (52%), Gaps = 5/190 (2%)
Query: 88 LIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGL-KCKPDLITYNIVL 145
L++ + +++A E S ++ N ++ + ++ A+ +FD + + +PD+++YNI++
Sbjct: 206 LLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILI 265
Query: 146 DILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
R GR +D + + M+E A + PD ++Y TL+ +C+ F+EM E G+
Sbjct: 266 KGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGM 325
Query: 205 KPDL--LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
D+ Y +I + + G E + +F M ++ + +Y +LID++ K G+ A
Sbjct: 326 GNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEA 385
Query: 263 MTIFEEMNSS 272
M +FE M S
Sbjct: 386 MALFERMKDS 395
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG-ESGIKP 206
L +G ++L + +M+ AGV P + YN LL+ L LD + F M E ++P
Sbjct: 197 LAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRP 256
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D+++Y LI + R G +++ ++M++Q ++ P Y +L+ G + + +
Sbjct: 257 DVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGL 316
Query: 266 FEEMN 270
F+EM
Sbjct: 317 FQEME 321
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 101 ESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
E I VN I + F K+ ++++ +F+ + PD YN+++D L + GR++
Sbjct: 429 EKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMD 488
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D + M++ G +Y L++ L K + + L ++ M + GI P + L
Sbjct: 489 DACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLA 548
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+G + R+ +++ + P + +I+ L K G+ A
Sbjct: 549 SGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQA 594
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 118/271 (43%), Gaps = 22/271 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ + K G A+ L + ++D + L + Y ++ +D + +
Sbjct: 373 IDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGI 432
Query: 65 TLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+++ YT+ F M D +L F E + + P+S N +I AKS +++
Sbjct: 433 AVNAIFYTSLIDGFGKAGMVDQSKEL--FEEMIAKGFVPDSY-CYNVLIDGLAKSGRMDD 489
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ ++ C + TY I++D L + + + L + +M + G+ P ++ TL +
Sbjct: 490 ACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLAS 549
Query: 182 NL-------RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
L R R LD E+ G+ P+ + +I+ + G +++ +L + +
Sbjct: 550 GLCLSGKFSRACRILD-------ELAPMGVIPE-TAHEDMINVLCKAGRFKQACKLADGI 601
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
Q+ V +I+ L+K G DLA+ +
Sbjct: 602 VQKGREIPGRVRTMMINALRKAGNTDLAVKL 632
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S +L+ +L + + L ++ M +G++P L Y L+D G ++ ++ +F+ M
Sbjct: 189 SSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAM 248
Query: 235 KQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ Q+RP + Y LI + G+ AM EM
Sbjct: 249 STEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQ 285
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 196 FREMGESGIKPDLLTYTA-LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
R G++ ++ + +A LI S G EE L + M+ + PS +Y L+D L
Sbjct: 174 LRAHGDTALRHLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLV 233
Query: 255 KMGKVDLAMTIFEEMNS 271
G +D A+ +F+ M++
Sbjct: 234 NAGLLDTAVNVFDAMST 250
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ +A++R++++A+ F+ + K DL YN ++DIL + +V F MK G
Sbjct: 194 IVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKG 253
Query: 169 -VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+PD +Y L+ + L + ++EM ++GIKPD++ Y LI +F ++G +E+
Sbjct: 254 RFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEA 313
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+++F++M++ PS +VY LI+ L M ++D A+ F+
Sbjct: 314 IKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQ 353
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 108/236 (45%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AY ++ A ++ D + ++ ++ S S Y + + L + +
Sbjct: 296 AYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLS 355
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ P + N +I A+ ++ + A + D ++ P+ TY+I+L+ L + ++
Sbjct: 356 KESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKI 415
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ N F M+ G P+ +Y ++ R+D+ L +++M E G+ P + ++AL
Sbjct: 416 EEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSAL 475
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I+ +EE+ F +M + IRP ++ +L + L + G++ LA + + +
Sbjct: 476 INGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS-DCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ +++ + + I K++ R + YT + D L +E+
Sbjct: 226 YNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM 285
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ ++ +I AF KS + ++A+ +F ++ C P Y ++++ LG + R+
Sbjct: 286 LDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERL 345
Query: 155 NDMLNEFA-----------------------------------SMKEAGVVPDFISYNTL 179
++ L F M+++G+ P+ +Y+ +
Sbjct: 346 DEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDII 405
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
LN+L K +++ F+ M G +P+L TYT ++ F ++ +L+++ MK++ +
Sbjct: 406 LNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGV 465
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P ++++ +LI+ L +++ A F+EM
Sbjct: 466 LPCMHMFSALINGLCFDNRLEEACVYFQEM 495
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI--TYNIVLDILGRVGRVNDMLNEFASM 164
+ +I A K +Q L++ ++ ++C+ L T+ I++ R +V + + F M
Sbjct: 158 HNLIEALGKIKQFR---LVWSLVEAMRCRSCLSKDTFKIIVRRYARARKVKEAVETFEKM 214
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGN 223
G+ D YN L++ L K +++ F+EM G PDL TYT L++ +G +
Sbjct: 215 SSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKD 274
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ +M I+P + Y LI K GK D A+ +F EM S
Sbjct: 275 LLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEES 323
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ +CK G++ A +L + + PN YN +L + + ++L ++
Sbjct: 341 IDGICKEGHLEVAHEILNRMPSYGL-KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 399
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + F +++ +E++++ +I +I F K I++A+
Sbjct: 400 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 459
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + CKP+ I+Y IVL L R D + + M + G + I++NTL+N L
Sbjct: 460 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 519
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + ++M +G PDL++Y+ +ID G+ G +E+L L N M + + P+
Sbjct: 520 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 579
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y S+ L + G+++ + +F+ + +
Sbjct: 580 IIYSSIASALSREGRINKVIQMFDNIQDT 608
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 7/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+E C+ G +AVR+L+ L + L + NC LV +A + +D + +L+DL
Sbjct: 201 LEAACRGGGFRSAVRVLEDLHARGCAL-DVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 259
Query: 64 RTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
Y + M C Q L+ EE+V++A P +I+ N +I ++ E+
Sbjct: 260 CEPDVVSYNAVLKGLCMAKRWGCVQELM--EEMVRMACPPNIVTFNTLISYLCRNGLFER 317
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ + C PD+ Y ++D + + G + M G+ P+ + YNTLL
Sbjct: 318 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 377
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R + EM + D +T+ L+D F + G ++ + L M + P
Sbjct: 378 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMP 437
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ++I+ K G +D A+ + + M +
Sbjct: 438 DVITYTTVINGFCKEGLIDEAVMLLKSMTA 467
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + + +P+ Y V+ + ID + +LK +
Sbjct: 411 VDFFCQNGLVDRVIELLEQMLEHGC-MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + + +++Q P + I N +I K +E+A+
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ ++ L M G+ P+ I Y+++ + L
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F + ++ I+ D + Y A+I S + G E ++ M P+
Sbjct: 590 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 649
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G V A + E+ S
Sbjct: 650 STYTILIRGLASEGFVKEAQEMLTELCS 677
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 2/214 (0%)
Query: 60 LVSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
L ++ + + YT F RA L ++E+ + + + I+ A +
Sbjct: 149 LAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGG 208
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
A+ + + + C D+ N+VL+ + G V++ L+ + G PD +SYN
Sbjct: 209 GFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYN 268
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L L +R EM P+++T+ LI R G E + M +
Sbjct: 269 AVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH 328
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P I +Y ++ID + K G +++A I M S
Sbjct: 329 GCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 362
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 96/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+ + +++ NRII A+ ++ + +A+ +F+ ++ +PD +TY ++DI
Sbjct: 388 LLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHA 447
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G + ++ + M+E G+ PD +Y+ ++N L K L F EM E+G P+L+
Sbjct: 448 KGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLV 507
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N E ++L+ DM+ RP Y +++ L G +D A +F EM
Sbjct: 508 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 567
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 84/161 (52%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++RQ + D + + CKP ++TYN ++ GR + + + F M++AG
Sbjct: 372 MIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAG 431
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K L+ + + M E G+ PD TY+A+++ G+ G++ +
Sbjct: 432 YEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAY 491
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LF +M + P++ Y +I K + + ++++M
Sbjct: 492 KLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDM 532
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP++ + ++ K + A +F + C P+L+TYNI++ + + +++
Sbjct: 468 SPDTF-TYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVV 526
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
+ M+ AG PD I+Y+ ++ L LD F EM PD Y L+D +
Sbjct: 527 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RHDWAPDEPVYGLLVDLW 585
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G+ GN++++L ++ M Q ++P++ SL+ K+ + A ++ + M
Sbjct: 586 GKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNM 636
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 124 LIFDHI------KGLKCKP----DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
L+ DH + LK +P D +Y ++ ILG+ + M M P
Sbjct: 342 LLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTV 401
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YN +++ + L + F EM ++G +PD +TY LID + G +E ++ L+
Sbjct: 402 VTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTR 461
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M++ + P + Y ++++ L K G + A +F EM
Sbjct: 462 MQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEM 497
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 108 RIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDM---LNEFAS 163
R + + + Q K + +H+ L CK D N VL +L +D L F
Sbjct: 302 RSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLL------HDHTIALGFFQW 355
Query: 164 MK-EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K + G D SY T++ L + R+ EM KP ++TY +I ++GR
Sbjct: 356 LKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRAN 415
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ E++++F +M++ P Y +LID K G ++ AM ++ M
Sbjct: 416 YLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRM 462
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 34/157 (21%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG--- 149
E+V+ +++ N +I AK+R E + ++ ++ +PD ITY+IV+++LG
Sbjct: 496 EMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCG 555
Query: 150 -------------------------------RVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ G V+ L + +M + G+ P+ + N+
Sbjct: 556 HLDEAEAVFIEMRHDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNS 615
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
LL+ KI R + M G+ P L TYT L+
Sbjct: 616 LLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLL 652
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 128/263 (48%), Gaps = 3/263 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + A LL ++ ++ + +PN +YN +++ ++D++ + D+L
Sbjct: 479 LCKGGKMDEACSLLDNMVNQGM-VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 537
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ Y+ D + L ++++ + + N II K Q+ +A
Sbjct: 538 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 597
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ P +TYN ++D + G ++ L + M E GV P+ ++Y +L+N K
Sbjct: 598 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKS 657
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R+DL L EM E G++ D+ Y+ALID F + ++E + LF ++ + + P+ VY
Sbjct: 658 NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVY 717
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
S+I + + ++ A+ +++M
Sbjct: 718 NSMISGFRDLNNMEAALVWYKKM 740
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G +S A L++ ++ F+P+ YN ++ + +ID + + +++
Sbjct: 578 NTIINGLCKVGQMSEARDKLKNFLEEG-FIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 636
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + YT+ F ++ L +E+ + + + +I F K R +E
Sbjct: 637 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 696
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +F + + P+ I YN ++ + + L + M + D +Y TL+
Sbjct: 697 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 756
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K RL + EM GI PD++T+ L++ G +E + ++ +M ++ +
Sbjct: 757 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 816
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
PS+ +Y +LI + G + A T+ +EM
Sbjct: 817 PSVLIYNTLIAGYFREGNLKEAFTLHDEM 845
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
K G+ A+ L + NI + +N ++ + + + LK+ L S
Sbjct: 551 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 610
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y + FI + L E+ + +++ +I F KS +I+ AL D +
Sbjct: 611 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 670
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
+ + D+ Y+ ++D + + + F + E G+ P+ I YN++++ R + +
Sbjct: 671 REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNM 730
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ L+++++M I DL TYT LID + G + + L+ +M + I P I + L
Sbjct: 731 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 790
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
++ L G+++ A I EEM+
Sbjct: 791 VNGLCNKGQLENARKILEEMD 811
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
K G V A + +++ + L AY+ ++ A + + +L ++L+++ S
Sbjct: 272 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 331
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
+T+ A + + + L EE++ P +++V ++ + ++ AL +F+ I
Sbjct: 332 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
P+ +TY+++++ G + + MK G+ P + N+LL K
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ F E + G+ ++ TY ++ + G ++E+ L ++M Q + P++ Y +
Sbjct: 452 EEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
I + G +D+A ++F +M
Sbjct: 511 ILGHCRKGNMDMASSVFSDM 530
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K GN+ +A+ + + + + + PN Y ++ ++N IDL+ + ++
Sbjct: 613 NSIVDGFIKEGNIDSALAVYREMCEFGVS-PNVVTYTSLINGFCKSNRIDLALKTRDEMR 671
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L Y+ F D E++++ + IV N +I F +E
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL+ + + + DL TY ++D L + GR+ + + M G+VPD I+++ L+
Sbjct: 732 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L +L+ EM + P +L Y LI + R GN++E+ L ++M + +
Sbjct: 792 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 851
Query: 241 PSIYVYRSLID 251
P Y LI+
Sbjct: 852 PDDVTYDILIN 862
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V N ++ A+ ++ +IE A+ F+ + P + NI+L L R + ++ + + M
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 251
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
G+ D + + ++ K R++ YFRE E G+K D Y+ +I + + N
Sbjct: 252 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 311
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L L +MK++ PS + S+I G + A+ + EEM
Sbjct: 312 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 356
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 8/284 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N I+ L K +V A +++ + +++N ++ D + + ++D+
Sbjct: 233 NVLIDALVKGDSVEHAHKVVLEFKGLIPLSSHSFNVLMHGWCRARKFDNARKAMEDMKEL 292
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YT+F A+ D ++ +EE+ + P + + ++ K+ Q+ KA
Sbjct: 293 GFEPDVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKA 352
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L +++ +K C D Y+ ++ ILG+ GR+ D + F M + GVV D ++YNT+++
Sbjct: 353 LEVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMIST 412
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
R + L +EM + KP++ TY L+ + ++ L + M + I P
Sbjct: 413 ACAHSREETALRLLKEMEDGSCKPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPD 472
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM--------NSSLSDLAG 278
+ Y L++ L K GKV A + EEM S+L LAG
Sbjct: 473 LATYSLLVNALCKTGKVADAYSFLEEMVLKGFTPKPSTLKGLAG 516
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 131 GLKCKPDLITYNIVLDILGRVGR---VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
G + P+L N+++DILG+ ++D++ E A +++ V + ++ ++ L K R
Sbjct: 153 GYRHSPELC--NLMVDILGKCKSFDPMSDLVEEMAKLEQGYVTLETMA--KVIRRLAKAR 208
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+ + + FR M + G+ D LID+ + ++E + ++ + K I S + +
Sbjct: 209 KHEDAIEAFRRMDKFGVNKDTAALNVLIDALVKGDSVEHAHKVVLEFK-GLIPLSSHSFN 267
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
L+ + K D A E+M
Sbjct: 268 VLMHGWCRARKFDNARKAMEDM 289
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%)
Query: 83 DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
+C + + + E+ + + + N +I F + +++EKAL + + +KG C L+T+
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
I++D + G++++ + MK G+ D + Y +L+ LD F E+ E
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G P +TY LI F + G ++E+ +F M ++ +RP++Y Y LID L +GK A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 263 M 263
+
Sbjct: 337 L 337
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 3/270 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I KLCK G V+ AV +++ ++ + N YN +L D+D + ++L +L S
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 65 TLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
D Y + Q L + +V+ + N ++ + K+ + KA
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ ++ I K + TY ++D + G +N M+ + + P YN LL++
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K LD F EM PD++++ +ID + G+I+ + L M + + P
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ Y LI+ K+G +D A++ F++M S
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDS 628
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 128/274 (46%), Gaps = 5/274 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LC+ AV LL+ +R +N +P+ +YN V+ E +++ + ++ ++ S
Sbjct: 149 LKGLCRNLECGKAVSLLREMR-RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ S + AF + + F++E+ + ++V +I F ++++
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD + P ITYN ++ ++G++ + F M E GV P+ +Y L++ L
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ + L M E +P+ +TY +I+ + G + +++ + MK+++ RP
Sbjct: 328 CGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
Y L+ L G +D A + M +SS +D
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 137 DLITYNIVLDILGR---VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
++ +NI+L L R G+ +L E M+ ++PD SYNT++ + + L+ L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLRE---MRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
EM SG L+T+ LID+F + G ++E++ +MK + + VY SLI
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 254 KKMGKVDLAMTIFEEM 269
G++D +F+E+
Sbjct: 258 CDCGELDRGKALFDEV 273
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK-NIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCK + A+ + L +K N +L ++ + D++ + ++ K +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 62 SSRTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S +SD YT F T + + L+ V ++ S+ N ++ + K +
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP--SVFDYNCLLSSLCKEGSL 545
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A +F+ ++ PD++++NI++D + G + + M AG+ PD +Y+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPD 207
+N K+ LD + +F +M +SG +PD
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPD 633
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ +G++ A ++ + +R+KNI ++ + ++ SR
Sbjct: 294 IQWYSSSGDIEEAEKIFEEMREKNI-------------------EMDVYVYSSMISWSRR 334
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
L N RAF + D+ +Q ++V A +I K+ Q+E A ++
Sbjct: 335 LG-----NMKRAFALFDEMSQ-----RDIVPNAH-----TYGALIGGVCKAGQMEAAEIL 379
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
++ +L+ +N +D R G++++ L A M++ G+ D +YN L N L K
Sbjct: 380 LLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCK 439
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ R D M E G+KP+++T+T I+ + + GN+ E+ RLF DM+++ P+I
Sbjct: 440 LHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIIT 499
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LID K KV A I EM
Sbjct: 500 YNTLIDAYCKKEKVKQAHKIKSEM 523
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 87/158 (55%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
K + ++A I + + KP+++T+ + ++I + G + + F M++ G VP
Sbjct: 436 GLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVP 495
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ I+YNTL++ K ++ EM G+ PDL TY++LI G ++E+L+LF
Sbjct: 496 NIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLF 555
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N+M+ + I ++ Y S+I L K G+ D A +++EM
Sbjct: 556 NEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEM 593
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 118/253 (46%), Gaps = 5/253 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I +CKAG + AA LL ++ K + L +N + +D + ++ ++ +
Sbjct: 364 IGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRL--QAIMEKK 421
Query: 65 TLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+++D +T A + + +V+ +++ I + K + +A
Sbjct: 422 GINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEA 481
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+F ++ P++ITYN ++D + +V + M G++PD +Y++L++
Sbjct: 482 ERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHG 541
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ R+D L F EM GI ++ TYT++I + G +E+ +L+++M + + P
Sbjct: 542 ECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPD 601
Query: 243 IYVYRSLIDNLKK 255
V+ SL+ + K
Sbjct: 602 DRVFTSLVGSFHK 614
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 37/266 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ G V A L+ + K I PN YN +L A D +ILK
Sbjct: 223 IDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILK------ 276
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L+ E+VV + SI+ I ++ S IE+A
Sbjct: 277 ------------------------LMEKEQVVFSVATYSIL-----IQWYSSSGDIEEAE 307
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ ++ + D+ Y+ ++ R+G + F M + +VP+ +Y L+ +
Sbjct: 308 KIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGV 367
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +++ I EM G+ +L+ + +D + R G ++E+LRL M+++ I +
Sbjct: 368 CKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADV 427
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y L + L K+ + D A I M
Sbjct: 428 FTYNILANGLCKLHRYDEAKCILNSM 453
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLK-CKPDLITYNIVLD-ILGRVGR--VNDMLNEFASM 164
+I + ++EKA + D + G KP++ TYN +L+ +GR R V+++L M
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILK---LM 278
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ VV +Y+ L+ ++ F EM E I+ D+ Y+++I R GN+
Sbjct: 279 EKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNM 338
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ + LF++M Q+ I P+ + Y +LI + K G+++ A + EM S DL
Sbjct: 339 KRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDL 390
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 76/202 (37%)
Query: 146 DILGRVGRVNDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
D+L RV N + +E + ++E G+V + S LL L++ +D C+ +F M E
Sbjct: 149 DMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVE 208
Query: 202 SG-------------------------------------IKPDLLTYTALIDSF-GR--- 220
S +KP++ TY L++++ GR
Sbjct: 209 SNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDR 268
Query: 221 -------------------------------TGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+G+IEE+ ++F +M+++ I +YVY S+
Sbjct: 269 KGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSM 328
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
I +++G + A +F+EM+
Sbjct: 329 ISWSRRLGNMKRAFALFDEMSQ 350
>gi|341605701|gb|AEK82953.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRM 183
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALXKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSXFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMSE 150
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 144/339 (42%), Gaps = 73/339 (21%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCKA + AV +LQ + DK + +P+ YN ++ ++ + ++LK +
Sbjct: 239 NSLIDGLCKAQAMDKAVAILQHMFDKGV-MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS 297
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESII--------------- 104
S Y+ + + C + +F V + P S I
Sbjct: 298 GSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 357
Query: 105 -------------------VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
N +I A+AK ++KA+ F ++ +PD+++Y+ V+
Sbjct: 358 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 417
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL------RKIRRLDLCLI----- 194
IL + GRV D + F M G+ P+ IS+ +L++ L +K+ L +I
Sbjct: 418 HILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH 477
Query: 195 ------------------------YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
+F + G+KPD+++Y LID + G ++ES++
Sbjct: 478 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQ 537
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M +RP + Y SL++ K G+V+ A+ ++ EM
Sbjct: 538 LDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREM 576
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK---GLKCKPD 137
TDD ++ + ++ + N +I ++ ++AL + H+ G C P+
Sbjct: 142 TDDAMDMVF--RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPN 199
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+++YN V+D + G V+ F M G+ PD ++YN+L++ L K + +D + +
Sbjct: 200 VVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQ 259
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M + G+ PD TY +I + G +EE++RL M ++P + Y LI K+G
Sbjct: 260 HMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIG 319
Query: 258 KVDLAMTIFEEM 269
+ A ++F+ M
Sbjct: 320 RCAEARSVFDSM 331
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 91/177 (51%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
+ + +LLI + +++ N +I F K +++KA +F + G PD++T
Sbjct: 178 SQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVT 237
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN ++D L + ++ + M + GV+PD +YN ++ + +L+ + ++M
Sbjct: 238 YNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS 297
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
SG++PD++TY+ LI + + G E+ +F+ M ++ +P+ +Y L+ G
Sbjct: 298 GSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 354
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F + + E++ P ++ N +I K++ ++KA+ I H+
Sbjct: 203 YNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMF 262
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD TYNI++ +G++ + + M +G+ PD ++Y+ L+ KI R
Sbjct: 263 DKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCA 322
Query: 191 LCLIYFREMGESGIKPDLLTYT----------ALID------------------------ 216
F M G KP+ Y ALID
Sbjct: 323 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 382
Query: 217 -SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ + G +++++ F +M+Q +RP + Y ++I L K G+V+ A+ F +M S
Sbjct: 383 CAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS 438
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 8/249 (3%)
Query: 25 LRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDC 84
+RD F A+N ++ A A+ +D + ++ + Y+ T
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRV 426
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAF---AKSRQIEKALLIFDHI-KGLKCKPDLIT 140
+ ++V +II +I + +++E+ L F+ I +G+ PD I
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE--LAFEMINRGIH--PDAIF 482
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
N ++D L + GRV + + F + GV PD +SYNTL++ + ++D + M
Sbjct: 483 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMV 542
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
G++PD TY +L++ + + G +E++L L+ +M ++ ++ ++ L + G++
Sbjct: 543 SIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIV 602
Query: 261 LAMTIFEEM 269
A ++ +M
Sbjct: 603 AARELYMKM 611
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 123/295 (41%), Gaps = 39/295 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIF--LPN--AYNCVLVASAETNDIDLSFQILKD 58
N I+ LC A+ LL + + PN +YN V+ + ++D ++ + +
Sbjct: 166 NALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHE 225
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ Y + + + ++ + N +I + Q
Sbjct: 226 MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQ 285
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A+ + + G +PD++TY++++ ++GR + + F SM G P+ Y+
Sbjct: 286 LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 345
Query: 179 LLNN------LRKIRRL-----------------------------DLCLIYFREMGESG 203
LL+ L +R L D + F EM ++G
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 405
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
++PD+++Y+ +I +TG +E+++ FN M + + P+I + SLI L +G+
Sbjct: 406 LRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGE 460
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P++I + N I+ K ++ +A FD + + KPD+++YN ++D VG++++ +
Sbjct: 478 PDAIFM-NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIK 536
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M G+ PD +YN+LLN K R++ L +REM +K +T ++
Sbjct: 537 QLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLF 596
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ G I + L+ M + + I Y +++ L + VD A+ +FE++ S
Sbjct: 597 QAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ +N++I + + A+ ++F + L PD+ +YN ++ L + + L
Sbjct: 127 VTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLI 186
Query: 163 SMKEAG---VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
M G P+ +SYNT+++ K +D F EM G+ PD++TY +LID
Sbjct: 187 HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLC 246
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +++++ + M + + P Y +I +G+++ A+ + ++M+ S
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGS 299
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 12/279 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL---PN--AYNCVLVASAETNDIDLSFQILK 57
N ++ LCK G V A Q D I + P+ +YN ++ +D S + L
Sbjct: 484 NTIMDNLCKEGRVVEA----QDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLD 539
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
++ S Y + + L E+ + I N ++ ++
Sbjct: 540 RMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAG 599
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+I A ++ + + + TYN VL L V++ L F ++ D +++
Sbjct: 600 RIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFS 659
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N L K+ R+D F M G PD++TY+ +I S G +EES LF M++
Sbjct: 660 IVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKN 719
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLA---MTIFEEMNSSL 273
++ ++ L + G V A +T +E N SL
Sbjct: 720 GCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSL 758
>gi|302772380|ref|XP_002969608.1| hypothetical protein SELMODRAFT_91676 [Selaginella moellendorffii]
gi|300163084|gb|EFJ29696.1| hypothetical protein SELMODRAFT_91676 [Selaginella moellendorffii]
Length = 408
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 138/309 (44%), Gaps = 40/309 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G V A++ + + +K + P+ YN V+ T +++ S ++ ++++
Sbjct: 90 NVVINSLCKLGKVDEALKYTREMSEKG-YPPDVYTYNFVMEGIGNTTNLEASAKVFEEMV 148
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + F Q + ++V ++ AF +S +++
Sbjct: 149 ANKCQPNIVTFNVLLDTFCKAGKTAQAADLVRKMVSYGCSPGERAFRILMDAFGRSGEVD 208
Query: 121 KALLIFDHIKGLKCKP------------------------------------DLITYNIV 144
A + + + P DLITYNI+
Sbjct: 209 AAHTLVRDLMKMNFYPNSLTLNVIMTRLNKVGKPEVALELYYDLKAAGGFVHDLITYNII 268
Query: 145 LDILGRVGRVNDMLNEFASMK-EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+D+LG+VG+V++ F +K E +VPD +YNT++ + K+ RL C +EM
Sbjct: 269 IDLLGKVGKVDEAWKAFEELKLEQRLVPDHYTYNTIVVRMAKVGRLQACFELIKEMEGRN 328
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+ D +Y L+++FGR G+I+++ + +MK P + ++L+++ +++ ++++
Sbjct: 329 VSLDRSSYCNLVEAFGRAGHIDQACSMLREMKASGHSPQMNTLQTLVNHARRLNRLEVVQ 388
Query: 264 TIFEEMNSS 272
+ E+ +
Sbjct: 389 LLMPELEQA 397
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+IEKAL FD + + KP + Y V+ L + G + F +M AG PD +YN
Sbjct: 32 EIEKALKFFDVFEHSE-KPAMKHYKYVMHKLVKAGCFQVVPLIFKNMIWAGNKPDRFAYN 90
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N+L K+ ++D L Y REM E G PD+ TY +++ G T N+E S ++F +M
Sbjct: 91 VVINSLCKLGKVDEALKYTREMSEKGYPPDVYTYNFVMEGIGNTTNLEASAKVFEEMVAN 150
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +P+I + L+D K GK A + +M S
Sbjct: 151 KCQPNIVTFNVLLDTFCKAGKTAQAADLVRKMVS 184
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-----AYNCVLVASAETNDIDLSFQILKDLL 60
+ KL KAG + +++ I+ N AYN V+ + + +D + + +++
Sbjct: 58 MHKLVKAGCFQVVPLIFKNM----IWAGNKPDRFAYNVVINSLCKLGKVDEALKYTREM- 112
Query: 61 VSSRTLSSDCYT-NFARAFI--MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S + D YT NF I T+ +F E V P +I+ N ++ F K+
Sbjct: 113 -SEKGYPPDVYTYNFVMEGIGNTTNLEASAKVFEEMVANKCQP-NIVTFNVLLDTFCKAG 170
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ +A + + C P + I++D GR G V+ + + P+ ++ N
Sbjct: 171 KTAQAADLVRKMVSYGCSPGERAFRILMDAFGRSGEVDAAHTLVRDLMKMNFYPNSLTLN 230
Query: 178 TLLNNLRKIRRLDLCL-IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK- 235
++ L K+ + ++ L +Y+ G DL+TY +ID G+ G ++E+ + F ++K
Sbjct: 231 VIMTRLNKVGKPEVALELYYDLKAAGGFVHDLITYNIIIDLLGKVGKVDEAWKAFEELKL 290
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+Q++ P Y Y +++ + K+G++ + +EM
Sbjct: 291 EQRLVPDHYTYNTIVVRMAKVGRLQACFELIKEMEG 326
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 84 CTQLLIFI-EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
C Q++ I + ++ + N +I + K ++++AL + PD+ TYN
Sbjct: 66 CFQVVPLIFKNMIWAGNKPDRFAYNVVINSLCKLGKVDEALKYTREMSEKGYPPDVYTYN 125
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
V++ +G + F M P+ +++N LL+ K + R+M
Sbjct: 126 FVMEGIGNTTNLEASAKVFEEMVANKCQPNIVTFNVLLDTFCKAGKTAQAADLVRKMVSY 185
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G P + L+D+FGR+G ++ + L D+ + P+ ++ L K+GK ++A
Sbjct: 186 GCSPGERAFRILMDAFGRSGEVDAAHTLVRDLMKMNFYPNSLTLNVIMTRLNKVGKPEVA 245
Query: 263 MTIFEEMNSS 272
+ ++ ++ ++
Sbjct: 246 LELYYDLKAA 255
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P+ V+ +I A K + + + +F+ + C + Y ++D +G+ GR + +
Sbjct: 329 PQHAYVL--VIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMA 386
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F MK++G+ D ++Y ++N L + +LD + FR E GI + + YT+LID FG
Sbjct: 387 LFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFG 446
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ G +++S LF +M + P Y Y LID L K G++D A +++ M D
Sbjct: 447 KAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCD 502
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C+AG A+ L ++++ P+ Y ++ + + +++
Sbjct: 264 IKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEM--EE 321
Query: 64 RTLSSDCYTNFARAFIMTDDCT-----QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R + +D A ++ C + + E +++ + + +I + K +
Sbjct: 322 RGMGND-IPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGR 380
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++A+ +F+ +K K D +TY ++++ L R G++++ + F S +E G+ + I Y +
Sbjct: 381 EKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTS 440
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K +D F EM G PD Y LID ++G ++++ L+ M+
Sbjct: 441 LIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDG 500
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y LID L K K + A+ ++ M
Sbjct: 501 CDQTVYTYTILIDGLFKEHKNEEALKFWDAM 531
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 100/190 (52%), Gaps = 5/190 (2%)
Query: 88 LIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGL-KCKPDLITYNIVL 145
L++ + +++A E S ++ N ++ + ++ A+ +FD + + +PD+++YNI++
Sbjct: 205 LLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILI 264
Query: 146 DILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
R GR +D + + M+E A + PD ++Y TL+ +C+ F+EM E G+
Sbjct: 265 KGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGM 324
Query: 205 KPDL--LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
D+ Y +I + + G E + +F M ++ + +Y +LID++ K G+ A
Sbjct: 325 GNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEA 384
Query: 263 MTIFEEMNSS 272
M +FE M S
Sbjct: 385 MALFERMKDS 394
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG-ESGIKP 206
L +G ++L + +M+ AGV P + YN LL+ L LD + F M E ++P
Sbjct: 196 LAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRP 255
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D+++Y LI + R G +++ ++M++Q ++ P Y +L+ G + + +
Sbjct: 256 DVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGL 315
Query: 266 FEEMN 270
F+EM
Sbjct: 316 FQEME 320
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 101 ESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
E I VN I + F K+ ++++ +F+ + PD YN+++D L + GR++
Sbjct: 428 EKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMD 487
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D + M++ G +Y L++ L K + + L ++ M + GI P + L
Sbjct: 488 DACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLA 547
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+G + R+ +++ + P + +I+ L K G+ A
Sbjct: 548 SGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQA 593
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 118/271 (43%), Gaps = 22/271 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ + K G A+ L + ++D + L + Y ++ +D + +
Sbjct: 372 IDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGI 431
Query: 65 TLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+++ YT+ F M D +L F E + + P+S N +I AKS +++
Sbjct: 432 AVNAIFYTSLIDGFGKAGMVDQSKEL--FEEMIAKGFVPDSY-CYNVLIDGLAKSGRMDD 488
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ ++ C + TY I++D L + + + L + +M + G+ P ++ TL +
Sbjct: 489 ACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLAS 548
Query: 182 NL-------RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
L R R LD E+ G+ P+ + +I+ + G +++ +L + +
Sbjct: 549 GLCLSGKFSRACRILD-------ELAPMGVIPE-TAHEDMINVLCKAGRFKQACKLADGI 600
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
Q+ V +I+ L+K G DLA+ +
Sbjct: 601 VQKGREIPGRVRTMMINALRKAGNTDLAVKL 631
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S +L+ +L + + L ++ M +G++P L Y L+D G ++ ++ +F+ M
Sbjct: 188 SSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAM 247
Query: 235 KQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ Q+RP + Y LI + G+ AM EM
Sbjct: 248 STEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQ 284
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 196 FREMGESGIKPDLLTYTA-LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
R G++ ++ + +A LI S G EE L + M+ + PS +Y L+D L
Sbjct: 173 LRAHGDTALRHLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLV 232
Query: 255 KMGKVDLAMTIFEEMNS 271
G +D A+ +F+ M++
Sbjct: 233 NAGLLDTAVNVFDAMST 249
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P+ V+ +I A K + + + +F+ + C + Y ++D +G+ GR + +
Sbjct: 326 PQHAYVL--VIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMA 383
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F MK++G+ D ++Y ++N L + +LD + FR E GI + + YT+LID FG
Sbjct: 384 LFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFG 443
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ G +++S LF +M + P Y Y LID L K G++D A +++ M D
Sbjct: 444 KAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCD 499
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C+AG A+ L ++++ P+ Y ++ + + +++
Sbjct: 261 IKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEM--EE 318
Query: 64 RTLSSDCYTNFARAFIMTDDCT-----QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
R + +D A ++ C + + E +++ + + +I + K +
Sbjct: 319 RGMGND-IPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGR 377
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++A+ +F+ +K K D +TY ++++ L R G++++ + F S +E G+ + I Y +
Sbjct: 378 EKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTS 437
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K +D F EM G PD Y LID ++G ++++ L+ M+
Sbjct: 438 LIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDG 497
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y LID L K K + A+ ++ M
Sbjct: 498 CDQTVYTYTILIDGLFKEHKNEEALKFWDAM 528
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 100/190 (52%), Gaps = 5/190 (2%)
Query: 88 LIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGL-KCKPDLITYNIVL 145
L++ + +++A E S ++ N ++ + ++ A+ +FD + + +PD+++YNI++
Sbjct: 202 LLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILI 261
Query: 146 DILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
R GR +D + + M+E A + PD ++Y TL+ +C+ F+EM E G+
Sbjct: 262 KGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGM 321
Query: 205 KPDL--LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
D+ Y +I + + G E + +F M ++ + +Y +LID++ K G+ A
Sbjct: 322 GNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEA 381
Query: 263 MTIFEEMNSS 272
M +FE M S
Sbjct: 382 MALFERMKDS 391
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG-ESGIKP 206
L +G ++L + +M+ AGV P + YN LL+ L LD + F M E ++P
Sbjct: 193 LAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRP 252
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D+++Y LI + R G +++ ++M++Q ++ P Y +L+ G + + +
Sbjct: 253 DVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGL 312
Query: 266 FEEMN 270
F+EM
Sbjct: 313 FQEME 317
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 101 ESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
E I VN I + F K+ ++++ +F+ + PD YN+++D L + GR++
Sbjct: 425 EKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMD 484
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D + M++ G +Y L++ L K + + L ++ M + GI P + L
Sbjct: 485 DACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLA 544
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+G + R+ +++ + P + +I+ L K G+ A
Sbjct: 545 SGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQA 590
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 118/271 (43%), Gaps = 22/271 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ + K G A+ L + ++D + L + Y ++ +D + +
Sbjct: 369 IDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGI 428
Query: 65 TLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+++ YT+ F M D +L F E + + P+S N +I AKS +++
Sbjct: 429 AVNAIFYTSLIDGFGKAGMVDQSKEL--FEEMIAKGFVPDSY-CYNVLIDGLAKSGRMDD 485
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ ++ C + TY I++D L + + + L + +M + G+ P ++ TL +
Sbjct: 486 ACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLAS 545
Query: 182 NL-------RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
L R R LD E+ G+ P+ + +I+ + G +++ +L + +
Sbjct: 546 GLCLSGKFSRACRILD-------ELAPMGVIPE-TAHEDMINVLCKAGRFKQACKLADGI 597
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
Q+ V +I+ L+K G DLA+ +
Sbjct: 598 VQKGREIPGRVRTMMINALRKAGNTDLAVKL 628
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
S +L+ +L + + L ++ M +G++P L Y L+D G ++ ++ +F+ M
Sbjct: 185 SSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAM 244
Query: 235 KQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ Q+RP + Y LI + G+ AM EM
Sbjct: 245 STEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQ 281
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 196 FREMGESGIKPDLLTYTA-LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
R G++ ++ + +A LI S G EE L + M+ + PS +Y L+D L
Sbjct: 170 LRAHGDTALRHLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLV 229
Query: 255 KMGKVDLAMTIFEEMNS 271
G +D A+ +F+ M++
Sbjct: 230 NAGLLDTAVNVFDAMST 246
>gi|260780430|gb|ACX50761.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780496|gb|ACX50794.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 188
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ + +F+++ KP++ Y +++D + G V D + M + G
Sbjct: 23 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEG 82
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++++ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I+E+
Sbjct: 83 FKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAE 142
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RLF +M ++ Y Y +LID K GKVD AMT+F+ M
Sbjct: 143 RLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 183
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 85/147 (57%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++T+++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ 238
ALID+F + G ++E++ LF M++++
Sbjct: 161 NALIDAFTKHGKVDEAMTLFKRMEEEE 187
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 59/107 (55%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ M E G+ +++ ++ L K +L+ F M G KP++ YT LID + +
Sbjct: 5 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+GN+E+++RL + M + +P + + +++ L K G+V+ A+ F+
Sbjct: 65 SGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQ 111
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/185 (18%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 19 VRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARA 77
V L Q + +K I +P +A++ V+ + ++ + + ++++ + YT
Sbjct: 2 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
+ + + + + ++ ++ + ++ K+ ++E+AL F + +
Sbjct: 62 YAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAIN 121
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
+ Y+ ++D LG+ GR+++ F M E G D YN L++ K ++D + F+
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFK 181
Query: 198 EMGES 202
M E
Sbjct: 182 RMEEE 186
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGNVEDAIRLLHRM 78
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I K G A L + + + P+ YN ++ A + +D + +L+ +
Sbjct: 269 NTVIHGFFKEGETGKACSLFHEMTRQGV-KPDVVTYNLIIDALCKARAMDKAELVLRQMT 327
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + + ++ +I++ N + + K + +
Sbjct: 328 TNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSK 387
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A IFD + KPD+++Y +L G DM+ F SMK G+ D +N L+
Sbjct: 388 EAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILI 447
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D ++ F EM + G+ PD++TY+ +I +F R G + +++ FN M + I+
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQ 507
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ VY S+I G + A + EM
Sbjct: 508 PNTAVYHSIIQGFCMHGGLVKAKELVSEM 536
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 8/268 (2%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVA----SAETNDIDLSFQILKDLLVS 62
LC A AV +L + +PN +Y+ +L S +DL + K+
Sbjct: 202 LCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGAC 261
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S + + Y F + + E+ + ++ N II A K+R ++KA
Sbjct: 262 SPNVVA--YNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKA 319
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L+ + +PD +TYN ++ +GR+ + F MK G++P+ + N+ L +
Sbjct: 320 ELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLAS 379
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K R F M G KPD+++Y L+ + G + + LFN MK I
Sbjct: 380 LCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAAD 439
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
V+ LI K G VD AM IF EM
Sbjct: 440 CRVFNILIHAYAKRGMVDDAMLIFTEMQ 467
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ +S L CY N T++ +L+ + ++ ++ + I+ +
Sbjct: 193 ITASTLLKCLCYAN------RTEEAVNVLL--HRMSELGCVPNVFSYSIILKGLCDNSMS 244
Query: 120 EKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++AL +F + +G C P+++ YN V+ + G + F M GV PD ++YN
Sbjct: 245 QRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYN 304
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ L K R +D + R+M +G +PD +TY +I + G ++E+ ++F MK +
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR 364
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P+I + S + +L K G+ A IF+ M +
Sbjct: 365 GLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 51/313 (16%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+CN ++ LCK G A + S+ K C L+ + F + L
Sbjct: 372 ICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGW---FADMIGLF 428
Query: 61 VS--SRTLSSDC--YTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
S S +++DC + A+ M DD +LIF E Q SP+ ++ + +I AF
Sbjct: 429 NSMKSNGIAADCRVFNILIHAYAKRGMVDD--AMLIFTEMQQQGVSPD-VVTYSTVISAF 485
Query: 114 AKSRQIEKALLIFDHI-------------------------------------KGLKCKP 136
++ ++ A+ F+ + KG+ +P
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIP-RP 544
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D++ +N V++ L + GRV D + F + + G PD I++ +L++ + ++D
Sbjct: 545 DIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKIL 604
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M G++ D++TY+ L+D + + G I + L LF +M+++ ++P+ Y ++ L +
Sbjct: 605 DAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Query: 257 GKVDLAMTIFEEM 269
G+ A F EM
Sbjct: 665 GRTVAARKKFHEM 677
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 126/269 (46%), Gaps = 4/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I K G V A+ + ++ + + P+ Y+ V+ A + + + + ++
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQGVS-PDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES-IIVVNRIIFAFAKSRQIEKA 122
++ Y + + F M + + E++ P I+ N +I + K ++ A
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDA 565
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
IFD + + +PD+IT+ ++D VG+++ +M+ GV D ++Y+TLL+
Sbjct: 566 HDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDG 625
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K R++ L FREM G+KP+ +TY ++ R G + + F++M + +
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT 685
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ +Y ++ L + D A+ +F+++ +
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGT 714
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
V I +I +I + +++KA I D ++ + + D++TY+ +LD + GR
Sbjct: 572 VTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR 631
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+ND L F M+ GV P+ ++Y +L L + R F EM ESG + Y
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ R +E++ LF + ++ SI + ++I+ + K+ + + A +F +++S
Sbjct: 692 ILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 114/272 (41%), Gaps = 8/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQILKDLL 60
I+ C G + A L+ + +K I P+ +N V L D F ++ D+
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIG 576
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ +T+ + + + ++ + + I+ + ++ + K+ +I
Sbjct: 577 ERPDVIT---FTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIN 633
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
L +F ++ KP+ +TY I+L L R GR +F M E+G Y +L
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L + D +I F+++G +K + +I++ + EE+ LF + +
Sbjct: 694 GGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLL 753
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P+ Y +I NL K G V+ A +F M S
Sbjct: 754 PNESTYGVMIINLLKDGAVEDANNMFSSMEKS 785
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 97/223 (43%), Gaps = 3/223 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G ++ + L + ++ K + PN Y +L + + +++ S T++
Sbjct: 628 KNGRINDGLTLFREMQRKGV-KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV 686
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + + +I +++ + SI ++N +I A K ++ E+A +F
Sbjct: 687 SIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFAT 746
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
I P+ TY +++ L + G V D N F+SM+++G+VP N ++ L +
Sbjct: 747 ISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGE 806
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ Y ++ I + T + ++ F R G E ++L
Sbjct: 807 IAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 94/164 (57%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F +++ A+ +F+ + PD+ T+NI++D + GRV + N A M +
Sbjct: 280 NALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMK 339
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ PD ++YN+L++ + ++ F M G+ ++ +Y+ +I+ F + +++
Sbjct: 340 QGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQ 399
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+++LF +M +QI P++ Y SLID L K G++ A+ + +EM+
Sbjct: 400 AMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMH 443
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 16/183 (8%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N ++ AF K ++++A + KPD++TYN ++D V VN + F
Sbjct: 311 VYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFN 370
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+M GV + SY+ ++N KI+ +D + F+EM I P+++TY++LID ++G
Sbjct: 371 TMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSG 430
Query: 223 NIEESLRLFNDM----------------KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
I +L L ++M K Q IRP+++ Y LID L K G+++ A IF
Sbjct: 431 RISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIF 490
Query: 267 EEM 269
E++
Sbjct: 491 EDL 493
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%)
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
L + + G +P+L+ YN ++D + + ND + ++ M + PD +YN L+N
Sbjct: 225 PLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALIN 284
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ +L + F +M I PD+ T+ L+D+F + G ++E+ M +Q I+P
Sbjct: 285 GFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP 344
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y SL+D + +V+ A +IF M
Sbjct: 345 DVVTYNSLMDRYCLVNEVNKAKSIFNTM 372
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I++NR F K + +++A+ +F + + P++ITY+ ++D L + GR++ L
Sbjct: 386 IMINR----FCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDE 441
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M + G PD I+ R++ + GI+P++ TYT LID + G
Sbjct: 442 MHDRGQQPDIITLT-------------------RQLKDQGIRPNMFTYTILIDGLCKGGR 482
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++ +F D+ + ++ Y +I G D AMT+ +M
Sbjct: 483 LEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKM 528
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%)
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
++P+L+ Y +IDS + ++ L+++M ++I P + Y +LI+ +GK+ A+
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296
Query: 264 TIFEEMNS 271
+F +M S
Sbjct: 297 GLFNKMTS 304
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 6/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK GNV A ++ + K+ P+ Y +++ D+D +F+I +
Sbjct: 232 NSVINALCKDGNVRDAESIINKVF-KSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y+ + + L FI E+ + ++ I A +IE
Sbjct: 291 EEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIE 350
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IF +K CKP++ TY ++ RV R+ + F M GVVP+ ++YN L+
Sbjct: 351 DAWKIFIDMKKKGCKPNVYTYTSLISG-QRVSRM--AIGLFHRMSRDGVVPNTVTYNALM 407
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L + +D LI F MG+ G P+ +Y LI + G+ E+++ + +M + +
Sbjct: 408 NVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPT 467
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y +I G D+A+ + E M ++
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAIRVLELMKAN 499
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQS-LRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I C G+ A+ +L + L+ + YN ++ ++ D D++ ++L+ +
Sbjct: 439 NELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA 498
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT F E++ + + +I + K +++
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDC 558
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + +K C+P++ TYN+++ L + + M E + PD ++Y+T++N
Sbjct: 559 AARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVIN 618
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + L L F +M + G P+L TY++LI + G+ G +EE+ +F+++K+Q + P
Sbjct: 619 GLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I+ GKVD A EM
Sbjct: 679 DEVTYVKMIEVCVMSGKVDRAFDFLGEM 706
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 107/240 (44%), Gaps = 2/240 (0%)
Query: 32 LPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLI 89
+PN YN ++ E +ID + + + ++ Y R + D + +
Sbjct: 397 VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS 456
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ +++ +++ N II + S + A+ + + +K C+PD +Y ++
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++ ++ F M + G+ P+ ++Y L++ K +LD M SG +P++
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY LI + N + L M +++I P + Y ++I+ L G + LA+ +F +M
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKM 636
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++++ N +I A K + A I + + KPD TY ++ R ++ F
Sbjct: 227 NLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIF 286
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E G P+ +Y+TL+N L R++ L + EM G+ P + T+TA I +
Sbjct: 287 NRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDM 346
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G IE++ ++F DMK++ +P++Y Y SLI +++ + +A+ +F M+
Sbjct: 347 GRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-QRVSR--MAIGLFHRMS 392
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 74/135 (54%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+P+L+ YN V++ L + G V D + + ++G+ PD +Y +++ + R LD
Sbjct: 225 QPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFE 284
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F M E G +P+ TY+ LI+ +G + E+L ++M + + P+++ + + I L
Sbjct: 285 IFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALC 344
Query: 255 KMGKVDLAMTIFEEM 269
MG+++ A IF +M
Sbjct: 345 DMGRIEDAWKIFIDM 359
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 120/270 (44%), Gaps = 8/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC +G V+ A+ + + + LP + + +VA + I+ +++I D+
Sbjct: 305 INGLCNSGRVNEALDFISEMTRHGV-LPTVHTFTAPIVALCDMGRIEDAWKIFIDM--KK 361
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + YT + I +++ I + + + + N ++ ++ +I+ A
Sbjct: 362 KGCKPNVYT--YTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSA 419
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L++F+ + C P+ +YN ++ +G ++ +M + P ++YN ++
Sbjct: 420 LIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKG 479
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
D+ + M +G +PD +YT LI F + +E + +FN+M + + P+
Sbjct: 480 YCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPN 539
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +LI K K+D A + E M S
Sbjct: 540 EVTYTALISGYCKDEKLDCAARMLERMKRS 569
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 82/162 (50%)
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
+I + + ++ +AL D K L TY +L L ++ + +++ + +
Sbjct: 163 HMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILRE 222
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G+ P+ + YN+++N L K + ++ +SG+KPD TYT++I + R +++ +
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+FN M ++ P+ Y +LI+ L G+V+ A+ EM
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM 324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 114/253 (45%), Gaps = 7/253 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ C +G+ A+R+L+ L N P+ +Y ++ + + ++L+ + +++
Sbjct: 477 IKGYCDSGDTDVAIRVLE-LMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535
Query: 64 RTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT + + DC ++ E + + ++ N +I K
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARML--ERMKRSGCRPNVQTYNVLIHGLTKQNNFSG 593
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + + K PD++TY+ V++ L G + L F M + G +P+ +Y++L+
Sbjct: 594 AEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQ 653
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R++ F E+ + G+ PD +TY +I+ +G ++ + +M +P
Sbjct: 654 ALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQP 713
Query: 242 SIYVYRSLIDNLK 254
++ Y LI L+
Sbjct: 714 TLQTYDVLIKGLQ 726
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 120/295 (40%), Gaps = 25/295 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK + A R+L+ ++ ++ PN YN ++ + N+ + ++ K +L
Sbjct: 547 ISGYCKDEKLDCAARMLERMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK 605
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y+ L ++V+ ++ + +I A + ++E+A
Sbjct: 606 ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAE 665
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F +K PD +TY ++++ G+V+ + M AG P +Y+ L+ L
Sbjct: 666 EMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
Query: 184 R----------------------KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ +I D+ + ++ E + Y AL+ R+
Sbjct: 726 QNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRS 785
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
G E+ L+ M Q P+ Y+ + +L + KVDLAM +F+ M+ +L
Sbjct: 786 GRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCEL 840
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%)
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
LN + G +Y TLL L K+ + + ++ G++P+LL Y ++I++
Sbjct: 178 LNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINA 237
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ GN+ ++ + N + + ++P + Y S+I + +D A IF M+
Sbjct: 238 LCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 3/266 (1%)
Query: 7 EKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
E+ G AVR S+ + I +++N +L ++ ++ + +LK L R
Sbjct: 147 ERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRP 206
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y A + + L ++E+VQ +++ N ++ + +S QI++A
Sbjct: 207 -DTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEF 265
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ +K KC+ D++TY V+ G G V F M + GVVP+ +YN L+ L K
Sbjct: 266 YLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCK 325
Query: 186 IRRLDLCLIYFREMGESGI-KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
++ ++ F EM G+ P+++TY +I G++E +L M + +R +
Sbjct: 326 KDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQ 385
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I G+V+ A+ +F +M
Sbjct: 386 TYNVVIRYFCDAGEVEKALEVFGKMG 411
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 5/254 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK+ V A LL++L + F P+ YN + ++ ++LK+++
Sbjct: 178 NTLLDILCKSKRVETAHSLLKTLTSR--FRPDTVTYNILANGYCLIKRTPMALRVLKEMV 235
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + ++ + F E+ + ++ +I F + ++
Sbjct: 236 QRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVK 295
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV-VPDFISYNTL 179
KA +F + P++ TYN ++ +L + V + + F M GV VP+ ++YN +
Sbjct: 296 KAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVV 355
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L + ++ L + MGE G++ + TY +I F G +E++L +F M
Sbjct: 356 IRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSC 415
Query: 240 RPSIYVYRSLIDNL 253
P++ Y LI +
Sbjct: 416 LPNLDTYNVLISAM 429
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 13/273 (4%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+ NGY C A+R+L+ + + I P YN +L +N I +++ +
Sbjct: 214 LANGY----CLIKRTPMALRVLKEMVQRGI-EPTMVTYNTMLKGYFRSNQIKEAWEFYLE 268
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + YT F + D + E+V+ ++ N +I K
Sbjct: 269 MKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDS 328
Query: 119 IEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+E A+++F+ + +G+ C P+++TYN+V+ L VG + L M E G+ +Y
Sbjct: 329 VENAVVVFEEMAREGV-CVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTY 387
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF---GRTGNIEESLRLFND 233
N ++ ++ L F +MG+ P+L TY LI + ++ ++ + +L D
Sbjct: 388 NVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMD 447
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
M + P + + +++ L G D A I
Sbjct: 448 MVDRGFLPRKFTFNRVLNGLVITGNQDFAKEIL 480
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
A+ R A + ++ L+ P T I+ + G+ + + F SM E G+ D
Sbjct: 115 ARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDL 174
Query: 174 ISYNTLLNNLRKIRRLD--------------------------LCLI--------YFREM 199
S+NTLL+ L K +R++ CLI +EM
Sbjct: 175 HSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLIKRTPMALRVLKEM 234
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ GI+P ++TY ++ + R+ I+E+ + +MK+++ + Y ++I G V
Sbjct: 235 VQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDV 294
Query: 260 DLAMTIFEEM 269
A +F EM
Sbjct: 295 KKAKRVFHEM 304
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 105/201 (52%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + + ++ + ++ +VQ +++ ++ K + AL + + ++
Sbjct: 155 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 214
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + D++ +N ++D L + V+D LN F M+ G+ P+ ++Y++L++ L R
Sbjct: 215 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 274
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+L+T+ ALID+F + G E+ +L++DM ++ I P I+ Y SL+
Sbjct: 275 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 334
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A +FE M S
Sbjct: 335 NGFCMHDRLDKAKQMFEFMVS 355
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++++V++ I +I + +A+ + D + C+P+L+TY +V++ L
Sbjct: 139 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 198
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G + LN M+ A + D + +NT++++L K R +D L F+EM GI+P+++
Sbjct: 199 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 258
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY++LI G ++ +L +DM +++I P++ + +LID K GK A ++++M
Sbjct: 259 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 318
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDL----- 59
+ LCK G+ A+ LL + I +N ++ + + +D + + K++
Sbjct: 194 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 253
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+V+ +L S C ++ R D +QLL ++++ +++ N +I AF K
Sbjct: 254 RPNVVTYSSLIS-CLCSYGRW----SDASQLL---SDMIEKKINPNLVTFNALIDAFVKE 305
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +A ++D + PD+ TYN +++ R++ F M PD ++Y
Sbjct: 306 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 365
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NTL+ K +R++ FREM G+ D +TYT LI G+ + + ++F M
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 425
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y L+D L GK++ A+ +F+ M S
Sbjct: 426 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 461
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 7/252 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G S A +LL + +K I PN +N ++ A + + ++ D++
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLYDDMI--K 320
Query: 64 RTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R++ D +T + F M D + E +V ++ N +I F KS+++E
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+F + D +TY ++ L G ++ F M GV PD ++Y+ LL+
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 440
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L +L+ L F M +S IK D+ YT +I+ + G +++ LF + + ++P
Sbjct: 441 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 500
Query: 242 SIYVYRSLIDNL 253
++ Y ++I L
Sbjct: 501 NVVTYNTMISGL 512
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C + A ++ + + K+ F P+ YN ++ ++ ++ ++ +++
Sbjct: 331 NSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREM- 388
Query: 61 VSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S R L D YT + DC +++V P I+ + ++ + +
Sbjct: 389 -SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+EKAL +FD+++ + K D+ Y +++ + + G+V+D + F S+ GV P+ ++YNT
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+++ L R L ++M E G P+ TY LI + R G+ S L +M+
Sbjct: 508 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 565
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 92/180 (51%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ ++ + N +I F + QI AL + + L +P ++T + +L+
Sbjct: 71 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 130
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R++D + M E G PD I++ TL++ L + + M + G +P+L+TY
Sbjct: 131 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 190
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ + G+ + +L L N M+ +I + ++ ++ID+L K VD A+ +F+EM +
Sbjct: 191 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 250
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 89/171 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ N+++ A AK ++ + + + + ++ L+ L TYNI+++ R +++ L
Sbjct: 46 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 105
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P ++ ++LLN +R+ + +M E G +PD +T+T LI
Sbjct: 106 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 165
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ L + M Q+ +P++ Y +++ L K G DLA+ + +M ++
Sbjct: 166 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 216
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 75/152 (49%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ +F + + P ++ +N +L + ++ + + +++ M+ +V +YN
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + ++ L L +M + G +P ++T ++L++ + I +++ L + M +
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RP + +LI L K A+ + + M
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRM 178
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 105/201 (52%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + + ++ + ++ +VQ +++ ++ K + AL + + ++
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 252
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + D++ +N ++D L + V+D LN F M+ G+ P+ ++Y++L++ L R
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+L+T+ ALID+F + G E+ +L++DM ++ I P I+ Y SL+
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A +FE M S
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVS 393
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 118/235 (50%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
YN ++ + I L+ +L ++ S ++ + + + ++++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V++ I +I + +A+ + D + C+P+L+TY +V++ L + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ LN M+ A + D + +NT++++L K R +D L F+EM GI+P+++TY++L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I G ++ +L +DM +++I P++ + +LID K GK A ++++M
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDL----- 59
+ LCK G+ A+ LL + I +N ++ + + +D + + K++
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+V+ +L S C ++ R D +QLL ++++ +++ N +I AF K
Sbjct: 292 RPNVVTYSSLIS-CLCSYGR----WSDASQLL---SDMIEKKINPNLVTFNALIDAFVKE 343
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +A ++D + PD+ TYN +++ R++ F M PD ++Y
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NTL+ K +R++ FREM G+ D +TYT LI G+ + + ++F M
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y L+D L GK++ A+ +F+ M S
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 7/252 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G S A +LL + +K I PN +N ++ A + + ++ D++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLYDDMI--K 358
Query: 64 RTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R++ D +T + F M D + E +V ++ N +I F KS+++E
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+F + D +TY ++ L G ++ F M GV PD ++Y+ LL+
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L +L+ L F M +S IK D+ YT +I+ + G +++ LF + + ++P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 242 SIYVYRSLIDNL 253
++ Y ++I L
Sbjct: 539 NVVTYNTMISGL 550
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C + A ++ + + K+ F P+ YN ++ ++ ++ ++ +++
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREM- 426
Query: 61 VSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
S R L D YT + DC +++V P I+ + ++ + +
Sbjct: 427 -SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+EKAL +FD+++ + K D+ Y +++ + + G+V+D + F S+ GV P+ ++YNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+++ L R L ++M E G P+ TY LI + R G+ S L +M+
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 92/180 (51%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ ++ + N +I F + QI AL + + L +P ++T + +L+
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R++D + M E G PD I++ TL++ L + + M + G +P+L+TY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ + G+ + +L L N M+ +I + ++ ++ID+L K VD A+ +F+EM +
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 89/171 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+ N+++ A AK ++ + + + + ++ L+ L TYNI+++ R +++ L
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P ++ ++LLN +R+ + +M E G +PD +T+T LI
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ L + M Q+ +P++ Y +++ L K G DLA+ + +M ++
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 75/152 (49%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ +F + + P ++ +N +L + ++ + + +++ M+ +V +YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + ++ L L +M + G +P ++T ++L++ + I +++ L + M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RP + +LI L K A+ + + M
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
>gi|260780558|gb|ACX50825.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 176
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ + +F+++ KP++ Y +++D + G V D + M + G
Sbjct: 13 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEG 72
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++++ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I+E+
Sbjct: 73 FKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAE 132
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RLF +M ++ Y Y +LID K GKVD AMT+F+ M
Sbjct: 133 RLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 84/146 (57%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++T+++V++ L +
Sbjct: 31 ENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKN 90
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 91 GRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 150
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQ 237
ALID+F + G ++E++ LF M+++
Sbjct: 151 NALIDAFTKHGKVDEAMTLFKRMEEE 176
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/169 (17%), Positives = 75/169 (44%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P+A++ V+ + ++ + + ++++ + YT + + + + +
Sbjct: 7 PHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLH 66
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++ ++ + ++ K+ ++E+AL F + + + Y+ ++D LG+ G
Sbjct: 67 RMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAG 126
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
R+++ F M E G D YN L++ K ++D + F+ M E
Sbjct: 127 RIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 175
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP+ + + +I A+ K R +E A + + ++ C +++TYN ++ L R G + +
Sbjct: 240 SPD-VYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
M++ G+VPD +Y ++N L K R D EM +G+ P+++ Y+ LID F
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
R GN +E+ ++ +M ++P+ Y +LI L K+G++ A I ++M
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMT 410
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 129/281 (45%), Gaps = 10/281 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I C+ G+ S A L+ + +N+ P+ YN +++ + +D + + ++L
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENL-TPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + M + + + +++ + + +I+ + KS +EK
Sbjct: 554 FQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVS 613
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ KGL PD Y IV+ L G + ++ + +++ G+VPD + Y +L++
Sbjct: 614 STLKSMLEKGLM--PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLIS 671
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K ++ + EM + GI+P + Y ALID F ++ +I + +FN + + + P
Sbjct: 672 GFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPP 731
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+ Y +LID K G + A+ ++ EM L++ P F
Sbjct: 732 NCVTYTTLIDGYCKAGDIRDAIDLYNEM---LTEGVAPDAF 769
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 109/234 (46%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
Y+ ++ A + D++ + ++++++ + +L+ Y + + +E+
Sbjct: 246 YSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME 305
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
II K + ++A + D + P+++ Y+ ++D R G +
Sbjct: 306 DYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNAD 365
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ M AGV P+ I+Y+ L+ L K+ R+ ++M + G D +TY +I
Sbjct: 366 EAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ R N EE+ L N+M++ I P++Y Y +I+ L ++G+ + A + E+M
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 121/280 (43%), Gaps = 8/280 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G A LL + + +PN Y+ ++ + D +F+I+K++ +
Sbjct: 320 INGLCKRGRPDQAKCLLDEMSCAGL-MPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y N R + ++++ +I + N +I + E+A
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAF 438
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L+ + ++ P++ TY+I+++ L ++G M G+ P+ Y L++
Sbjct: 439 LLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGY 498
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L ++M + PDL Y +LI G ++E++ +++M ++ +P+
Sbjct: 499 CREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPND 558
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM-NSSLSDLAGPKDF 282
+ Y LI G ++ A + +M NS L+ P DF
Sbjct: 559 FTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN----PNDF 594
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%)
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
++G PD+ TY+ +++ +V + M+E G + ++YNTL+ L +
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ Y +EM + G+ PD TY A+I+ + G +++ L ++M + P++ VY +
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 249 LIDNLKKMGKVDLAMTIFEEMNSS 272
LID + G D A I +EM+++
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAA 377
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 6/268 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+E K+ N+ L+S+ +K + N Y V+ + + + + +L + +
Sbjct: 600 LEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL 659
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S Y + F D + + ++E+ + I N +I F KS I A
Sbjct: 660 VPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARN 719
Query: 125 IFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
IF+ I KGL P+ +TY ++D + G + D ++ + M GV PD Y+ L
Sbjct: 720 IFNSIICKGLP--PNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG 777
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L L EM G + ++ L+ F + G ++E+++ + M + I PS
Sbjct: 778 CSNSGDLQQALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPS 836
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +++ L + GK+ A TIF E+
Sbjct: 837 LLTVENIVIGLGEAGKLSEAHTIFVELQ 864
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+V++ ++ + K+ ++ + +K L P L N +L L R ++ +
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ AG+ PD +Y+TL+ K+R L+ EM E+G +++TY LI R G
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
IEE+ +M+ + P + Y ++I+ L K G+ D A + +EM+ +
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCA 342
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 4/234 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I L +G++ AAV +L S+ +KN +P++ Y ++ + D++ + +L ++
Sbjct: 635 IHNLSSSGHMQAAVSVL-SVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG 693
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
CY F +DD + ++ P + + +I + K+ I A+
Sbjct: 694 IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+++ + PD Y+++ G + L M G S+NTL++
Sbjct: 754 DLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IISSFNTLVHGF 812
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
K +L + + M + I P LLT ++ G G + E+ +F +++Q+
Sbjct: 813 CKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQK 866
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G + AV++ + K P+A YN ++ + +D++ Q +D++
Sbjct: 190 ISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRG 249
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y A M + +EE+ + + N +I + K +KAL
Sbjct: 250 IAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKAL 309
Query: 124 LIFDHI--KGLKC---------------------------------KPDLITYNIVLDIL 148
+F+ + KG++ +PD++ YN +++
Sbjct: 310 EVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSH 369
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G + A M++ + PD ++YNTL+ + RLD EM + GI+PDL
Sbjct: 370 CTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDL 429
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
++Y LI + G+I+++LR+ ++M + P++ Y +LI L K+ + D A + +E
Sbjct: 430 VSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKE 489
Query: 269 M 269
M
Sbjct: 490 M 490
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 13/259 (5%)
Query: 16 SAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
+ ++RL L+ ++ +P A L++S + +F + D+ L + +
Sbjct: 67 ATSLRLYAQLKSLSVPIPVASLHPLLSSLPSAP---AFALFADIYRLRLPLCTTTFNIML 123
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK---GL 132
R T + L E + Q+ P ++ N +I F +++ AL + ++ G+
Sbjct: 124 RHLCATGKPVRAL---ELLRQMPRPNAV-TYNTVIAGFCARGRVQAALEVMREMRERGGI 179
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG-VVPDFISYNTLLNNLRKIRRLDL 191
PD TY ++ ++GR+ D + F M G V P + YN L+ + +LD+
Sbjct: 180 A--PDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
L Y +M + GI + TY L+ + ++ + +M++ P ++ Y LI+
Sbjct: 238 ALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILIN 297
Query: 252 NLKKMGKVDLAMTIFEEMN 270
K G A+ +FEEM+
Sbjct: 298 GYCKEGNEKKALEVFEEMS 316
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I + K ++E A+ +FD + KG + P + YN ++ VG+++ L M +
Sbjct: 189 LISGWCKIGRMEDAVKVFDEMLTKG-EVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQ 247
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G+ +YN L++ L R EM ++G PD+ TY LI+ + + GN ++
Sbjct: 248 RGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKK 307
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+L +F +M Q+ +R + Y SLI + G+V
Sbjct: 308 ALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQV 340
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 3/241 (1%)
Query: 15 VSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT 72
S A +L+ ++ KN F P+ YN ++ + + + ++ +++ ++ YT
Sbjct: 270 ASDAYAVLEEMQ-KNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYT 328
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
+ F + V+ +++ N +I + +E+A I ++
Sbjct: 329 SLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKK 388
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
+ PD +TYN ++ +GR+++ M + G+ PD +SYNTL++ +
Sbjct: 389 RIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDA 448
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L EM + G P L+TY ALI + +++ L +M + I P Y SLI+
Sbjct: 449 LRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508
Query: 253 L 253
L
Sbjct: 509 L 509
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 23/226 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLV----ASAETNDIDLSFQ---- 54
NGY CK GN A+ + + + K + L+ + + D F
Sbjct: 297 NGY----CKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352
Query: 55 --ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
I D+++ + ++S C D + + E+ + P + N ++
Sbjct: 353 KGIRPDVVMYNALINSHCTGG---------DMERAYEIMAEMEKKRIPPDDMTYNTLMRG 403
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
F ++++A + D + +PDL++YN ++ G + D L M + G P
Sbjct: 404 FCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPT 463
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
++YN L+ L KIR+ D +EM GI PD TY +LI+
Sbjct: 464 LMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 136/279 (48%), Gaps = 7/279 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N + +C++G+ S A +L+ + ++N+ Y+ ++ + ID + + K++
Sbjct: 197 NSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S Y + R + ++++V ++I N ++ F K ++++
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A ++ + P++ITYN ++D + R+ N+ML+ K + PD +++ +
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS---PDIVTFTS 373
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ ++R+D + FR + + G+ + +TY+ L+ F ++G I+ + LF +M
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ P + Y L+D L GK++ A+ IFE++ S DL
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LC+ G + AA+ L + + K I YN ++ + + +LKD++
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ + F+ + +E++ +II N ++ + ++ +A
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + KC PD++T+ ++ V RV+D + F ++ + G+V + ++Y+ L+
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++ L F+EM G+ PD++TY L+D G +E++L +F D+++ ++ I
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 245 VYRSLIDNLKKMGKVDLAMTIF 266
+Y ++I+ + K GKV+ A +F
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLF 496
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
++ F A T +L F +++ +I +N +I F + + A + +
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
L +PD T+N +++ L G+V+ + M E G PD ++YN+++N + +
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L R+M E +K D+ TY+ +IDS R G I+ ++ LF +M+ + I+ S+ Y SL+
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
L K GK + + ++M S
Sbjct: 271 RGLCKAGKWNDGALLLKDMVS 291
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 92/177 (51%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+V+++ N +I ++ KA+++ D + C+PD++TYN +++ + R G
Sbjct: 148 KVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSG 207
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ + M+E V D +Y+T++++L + +D + F+EM GIK ++TY
Sbjct: 208 DTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+L+ + G + L DM ++I P++ + L+D K GK+ A +++EM
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 129/281 (45%), Gaps = 6/281 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LCKAG + LL+ + + I +PN +N +L + + + ++ K+++
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + M + ++ ++ +V+ I+ +I + ++++
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ +F +I + +TY+I++ + G++ F M GV+PD ++Y LL
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L +L+ L F ++ +S + ++ YT +I+ + G +E++ LF + + ++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
P++ Y +I L K G + A + +M D P D
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKME---EDGNAPND 543
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 87/168 (51%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ ++ ++ +V+ ++ N I+ +S A + ++ K D+ TY+ +
Sbjct: 175 SKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTI 234
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+D L R G ++ ++ F M+ G+ ++YN+L+ L K + + + ++M I
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
P+++T+ L+D F + G ++E+ L+ +M + I P+I Y +L+D
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC G VS AV L+ + + N P+ YN ++ + D L+F +L+ +
Sbjct: 162 NTLINGLCLEGKVSKAVVLVDRMVE-NGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM- 219
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R + +D +T + II + + I+
Sbjct: 220 -EERNVKADVFT---------------------------------YSTIIDSLCRDGCID 245
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ +F ++ K ++TYN ++ L + G+ ND M +VP+ I++N LL
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +L ++EM GI P+++TY L+D + + E+ + + M + +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
P I + SLI + +VD M +F ++
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+V ++ ++ + ++EKAL IF+ ++ K ++ Y +++ + +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G+V D N F S+ GV P+ ++Y +++ L K L I R+M E G P+ TY
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
LI + R G++ S +L +MK + +ID L
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G + A L + + + I PN YN ++ N + + +L DL+V ++ S
Sbjct: 310 KEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKC-SP 366
Query: 69 D--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
D +T+ + + M + + + + + + ++ F +S +I+ A +F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ PD++TY I+LD L G++ L F ++++ + + Y T++ + K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+++ F + G+KP+++TYT +I + G++ E+ L M++ P+ Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
+LI + G + + + EEM S
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKS 571
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ +M+ +GV PD +Y+ L+N L K ++D + F EM + G+ P+ +
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 111/259 (42%), Gaps = 5/259 (1%)
Query: 17 AAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+RL QS+ D K P+ ++N ++ + D+D F++ + VS Y
Sbjct: 150 GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTY 209
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKG 131
+ + +E++ + + +I K+ +++ A+ I+ +
Sbjct: 210 SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
PDLITYN ++ L + G + + M G+ PD I+Y TL++ K L+
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLET 329
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
Y + M + I+ D + YTALI + G ++ ++ +M ++P I Y +I+
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIIN 389
Query: 252 NLKKMGKVDLAMTIFEEMN 270
K G V + +EM
Sbjct: 390 EFCKKGDVWTGSKLLKEMQ 408
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A ++FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+ PD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGK-VDLAMTIFEEMNSSLSDLAG 278
M ++ IR Y +LI L + G+ VD + E +N L G
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIG 382
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + DK + +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANVLFDEMLDKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D + KGL PD ITY ++D + G + M + + D ++Y L++
Sbjct: 297 DLIDEMIMKGLX--PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R REM G+KP++ TYT +I+ F + G++ +L +M++ P
Sbjct: 355 GLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Query: 242 SI 243
S+
Sbjct: 415 SV 416
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + ++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL N M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 DLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEM 232
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G + D + + KE F + +L +L K++ L ++ E E G L +
Sbjct: 80 GFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFF 139
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+ SF + G I + +F+ + + +RPS+ + +L++ K+G +D + M
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQV 199
Query: 272 S 272
S
Sbjct: 200 S 200
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ +CK G++ A +L + + PN YN +L + + ++L ++
Sbjct: 304 IDGICKEGHLEVAHEILNRMPSYGLK-PNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + F +++ +E++++ +I +I F K I++A+
Sbjct: 363 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAV 422
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + CKP+ I+Y IVL L R D + + M + G + I++NTL+N L
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + ++M +G PDL++Y+ +ID G+ G +E+L L N M + + P+
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 542
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y S+ L + G+++ + +F+ + +
Sbjct: 543 IIYSSIASALSREGRINKVIQMFDNIQDT 571
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 7/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+E C+ G +AVR+L+ L + L + NC LV +A + +D + +L+DL
Sbjct: 164 LEAACRGGGFRSAVRVLEDLHARGCAL-DVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 222
Query: 64 RTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
Y + M C Q L+ EE+V++A P +I+ N +I ++ E+
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELM--EEMVRMACPPNIVTFNTLISYLCRNGLFER 280
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ + C PD+ Y ++D + + G + M G+ P+ + YNTLL
Sbjct: 281 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 340
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R + EM + D +T+ L+D F + G ++ + L M ++ P
Sbjct: 341 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMP 400
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ++I+ K G +D A+ + + M +
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTA 430
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G V + LL+ + ++ +P+ Y V+ + ID + +LK +
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLERGC-MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT + + + +++Q P + I N +I K +E+A+
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + C PDLI+Y+ V+D LG+ G+ ++ L M G+ P+ I Y+++ + L
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R++ + F + ++ I+ D + Y A+I S + G E ++ M P+
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y LI L G V A + E+ S
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTELCS 640
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 2/214 (0%)
Query: 60 LVSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
L ++ + + YT F RA L ++E+ + + + I+ A +
Sbjct: 112 LAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGG 171
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
A+ + + + C D+ N+VL+ + G V++ L+ + G PD +SYN
Sbjct: 172 GFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYN 231
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L L +R EM P+++T+ LI R G E + M +
Sbjct: 232 AVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH 291
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P I +Y ++ID + K G +++A I M S
Sbjct: 292 GCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 325
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +N+ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 189 RLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 248
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEM 308
Query: 270 N 270
+
Sbjct: 309 S 309
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A +FD +KGL P+ +T+ ++D + GRV+ + + M
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLI--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
++PD I+YNTL+ L K L EM G+KPD TY LID + G+++
Sbjct: 276 QCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDT 335
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M Q+ IR Y +LI L + G+ A + EM S
Sbjct: 336 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 21/276 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ + P+ +YN ++ D++ F++ +L S
Sbjct: 149 MHRFCKDGDIRVAQSVFDAITKWGL-RPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASG 207
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD +L F E +V+ P + +I K+
Sbjct: 208 --VQPDVYTYSVLINGLCKESKM-DDANEL--FDEMLVKGLIPNGVTFTT-LIDGHCKNG 261
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFI 174
+++ A+ I+ + PDLITYN ++ L + G + +D+++E SMK G+ PD
Sbjct: 262 RVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEM-SMK--GLKPDKF 318
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 319 TYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 379 LSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQ 414
>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
diamantinensis]
Length = 284
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 95/181 (52%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 74 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYX 133
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD SY+ L+N L K ++D F EM G+ P+ +
Sbjct: 134 RLGDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGV 193
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 194 TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 253
Query: 270 N 270
Sbjct: 254 G 254
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 58/121 (47%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G +D + + +E + F + +L +L K++ L ++ E+ E G L +
Sbjct: 31 GFXHDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFF 90
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+ F + G+I + +F+ + + +RPS+ Y +L++ ++G +D + M +
Sbjct: 91 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGDLDEGFRLKSAMLA 150
Query: 272 S 272
S
Sbjct: 151 S 151
>gi|399107192|gb|AFP20360.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 185
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 13 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 70
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 71 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSL 130
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
ID L K G++D A +FEEM+
Sbjct: 131 IDGLGKAGRIDEAERLFEEMS 151
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I LC G++ A +L + F PNA Y+ ++ ++ D+D + I D+
Sbjct: 343 NVLIRGLCSVGDLKGASSVLNDMEQHGCF-PNARTYSTLIDGFSKAGDLDGAISIWNDMT 401
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + YTN F Q I++++ P + + N +I + R++
Sbjct: 402 RSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVG 461
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL +F ++ C P+ TYN +L L R G D L M+ G+ ++YNT++
Sbjct: 462 RALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVV 521
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L ++R + + M GI+PD T+TA+I ++ + G + + + M
Sbjct: 522 SGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCG 581
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+I VY L+ L K++ AM +M
Sbjct: 582 RNILVYTILMAELCNQDKLEDAMVYLLKM 610
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 8/266 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+ V AA ++L + K P+ Y ++ A +D + ++L S+
Sbjct: 176 VRALCQNHRVGAARKMLDEMATKGC-PPDDVTYGTIVSALCTLGRVDEATEVL-----SA 229
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y A ++ + ++V ++I I+ AF K+ ++ A
Sbjct: 230 APPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMAC 289
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + C P++ T+ ++ L GRV+D L+ + M G P +SYN L+ L
Sbjct: 290 AILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGL 349
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L +M + G P+ TY+ LID F + G+++ ++ ++NDM + +P++
Sbjct: 350 CSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNV 409
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
VY +++ K + A ++ ++M
Sbjct: 410 VVYTNMVGVFCKKLMFNQAESLIDKM 435
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 14 NVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
N+ AV L+ K+ PN YN ++ A + + + + ++L ++ +++ D
Sbjct: 148 NMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEM--ATKGCPPD-- 203
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQI--ASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
+ I++ CT L ++E ++ A+P N +I A + ++++ + +
Sbjct: 204 -DVTYGTIVSALCT--LGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVVGDM 260
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
G +P++ITY +++ + G + A M G P+ ++ L+ L R+
Sbjct: 261 VGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRV 320
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
L ++ M G P ++Y LI G+++ + + NDM+Q P+ Y +L
Sbjct: 321 HDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTL 380
Query: 250 IDNLKKMGKVDLAMTIFEEMNSS 272
ID K G +D A++I+ +M S
Sbjct: 381 IDGFSKAGDLDGAISIWNDMTRS 403
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 112/264 (42%), Gaps = 4/264 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+ LC G V A +L + + +YN V++A + F ++ D++
Sbjct: 211 VSALCTLGRVDEATEVLSAAPP----VAASYNAVILALCREFRMQEVFAVVGDMVGRGLQ 266
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ YT AF + + +V ++ ++ ++ AL +
Sbjct: 267 PNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDM 326
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + P ++YN+++ L VG + + M++ G P+ +Y+TL++ K
Sbjct: 327 WKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSK 386
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
LD + + +M SG KP+++ YT ++ F + ++ L + M + P+
Sbjct: 387 AGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVT 446
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI +L +V A+ +F EM
Sbjct: 447 FNTLIRSLCNCRRVGRALGVFHEM 470
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRV 154
A P + + N +I A + + L+ +++ +P++ TYN+++ L RVG
Sbjct: 129 ARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAA 188
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE--SGIKPDLLTYT 212
ML+E A+ G PD ++Y T+++ L + R+D E E S P +Y
Sbjct: 189 RKMLDEMAT---KGCPPDDVTYGTIVSALCTLGRVD-------EATEVLSAAPPVAASYN 238
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
A+I + R ++E + DM + ++P++ Y ++++ K G++ +A I M
Sbjct: 239 AVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARM 295
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 129/266 (48%), Gaps = 36/266 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCK G AA+ LL+ + K + L Y+ ++ + + +++ +F + +++ SR
Sbjct: 182 INGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV--SR 239
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+SS+ I+ + +I F +++ A+
Sbjct: 240 RISSN---------------------------------IVTYSALISGFCIVGKLKDAIG 266
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ + PD+ T+NI++D + GRV + N A M + G+ PD ++YN+L++
Sbjct: 267 LFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC 326
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ +++ M G+ + +Y +I+ F + ++++++LF +M +QI P++
Sbjct: 327 LVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVI 386
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y SLID L K G++ A+ + + M+
Sbjct: 387 TYNSLIDGLCKSGRISYALELIDLMH 412
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F K + +++A+ +F + + P++ITYN ++D L + GR++ L M +
Sbjct: 354 NIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHD 413
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD I+Y+++L+ L K +D + ++ + GI+P++ TYT LID + G +E+
Sbjct: 414 RGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLED 473
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSD 275
+ +F D+ + ++ Y +I G D A+++ +M NS + D
Sbjct: 474 ARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPD 524
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
L K+ + + L Q + + I PN +N ++ + I +F +L +L
Sbjct: 80 LVKSKHYHTVLSLFQKMEYRGI-KPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEP 138
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ F + F + Q L F +++V + + +I K + AL +
Sbjct: 139 DTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELL 198
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ G + D++ Y+ ++D + + VND + ++ M + + ++Y+ L++ +
Sbjct: 199 RRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIV 258
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+L + F +M I PD+ T+ L+D+F + G ++E+ M +Q I+P I Y
Sbjct: 259 GKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTY 318
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMN 270
SL+D + +V++A +I M+
Sbjct: 319 NSLMDGYCLVNEVNMAKSILNTMS 342
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 16/292 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK G V A L + + I P+ YN ++ N+++++ IL +
Sbjct: 287 VDAFCKEGRVKEAKNGLAMMMKQGI-KPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + Y F Q + +E+ ++I N +I KS +I AL
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + +PD+ITY+ +LD L + V+ + +K+ G+ P+ +Y L++ L
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RL+ F ++ G + TYT +I F G +E+L L + MK P
Sbjct: 466 CKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDA 525
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM-------------NSSLSDLAGPKDF 282
Y +I +L + D A + EM + SLS +A P F
Sbjct: 526 ITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHF 577
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F + I A + I + +PD IT N + G+++ LN +
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G D +SY TL+N L K+ L R + ++ D++ Y+ +IDS + N+ +
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ L+++M ++I +I Y +LI +GK+ A+ +F +M S
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 73/165 (44%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F + + A+ +F+ + P + + +L L + + +L+ F M+ G+ P
Sbjct: 44 TFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKP 103
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+F+++N L+N ++ + ++ + G +PD +T I F G I ++L
Sbjct: 104 NFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFH 163
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ + Y +LI+ L K+G+ A+ + ++ L L
Sbjct: 164 DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQL 208
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 131/268 (48%), Gaps = 1/268 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N +I L + V A+ + + LR + Y ++ + ++ + +ILK+
Sbjct: 363 NIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKD 422
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L + Y++ + L + ++ + S V N +I F ++ ++E+
Sbjct: 423 GGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEE 482
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ F ++ C P +++YN +++ L + R +D + M E PD I+Y+ L++
Sbjct: 483 AICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMD 542
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + +++D+ L +R++ G++PD+ + L+ G IE++L L+++MKQ P
Sbjct: 543 GLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLP 602
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ + +L+D L K + ++A I+ M
Sbjct: 603 NLVTHNTLMDGLYKARECEMASVIWACM 630
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCK G+++ A+++L+ +D L AY+ ++ ++ +D + I+ +
Sbjct: 401 IHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGC 460
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
LS F+ + + F E+ +++ N +I K+ + A
Sbjct: 461 ELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYS 520
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGR---------------------------------- 150
+ KPD+ITY++++D L +
Sbjct: 521 FVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLC 580
Query: 151 -VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
G++ D L +++MK++ +P+ +++NTL++ L K R ++ + + M ++G +PD++
Sbjct: 581 SAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDII 640
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+Y + G I + + LF+D + I P+ + L+ + K+G +D
Sbjct: 641 SYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 113/270 (41%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N + C+AG + + L + +N +YN + E ++ + + + L
Sbjct: 329 NALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRR 388
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S Y + L ++E + I+ +K ++++A
Sbjct: 389 GSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEA 448
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L I + C+ N +++ R ++ + + F M+ G P +SYNTL+N
Sbjct: 449 LGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLING 508
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K R + +EM E KPD++TY+ L+D + I+ +L L+ + + + P
Sbjct: 509 LCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPD 568
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ L+ L GK++ A+ ++ M S
Sbjct: 569 VTMHNILMHGLCSAGKIEDALLLYSNMKQS 598
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 7/220 (3%)
Query: 53 FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
FQ ++++ + S Y AFI + + F+ + ++ N +I
Sbjct: 101 FQKMEEIFGCKPGIRS--YNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKI 158
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
K RQ +A + D + KPD+ +Y V++ + + G + L F M E G+VPD
Sbjct: 159 SVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPD 218
Query: 173 FISYNTLLNNLRKIRRLDLCL---IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
+ YN +++ +R D I+ R + S + P+++TY +I+ + G +ESL
Sbjct: 219 VMCYNIMIDGF--FKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLE 276
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ MK+ + ++ Y SLI L +G VD A+ +++EM
Sbjct: 277 MWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEM 316
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 83 DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYN 142
DC Q + EE+ I N ++ AF ++ +EKA + + + P+L TYN
Sbjct: 99 DCFQKM---EEI--FGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYN 153
Query: 143 IVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
I++ I + + + M + PD SY T++N + K L L F EM E
Sbjct: 154 ILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFER 213
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G+ PD++ Y +ID F + G+ + ++ + K + P++ Y +I+ L KMG+ D
Sbjct: 214 GLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDE 273
Query: 262 AMTIFEEM 269
++ ++E M
Sbjct: 274 SLEMWERM 281
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 63 SRTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S+ L D Y+ + + D L +E+ + ++ N +I F K
Sbjct: 177 SKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYV 236
Query: 121 KALLIFDH-IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ I++ +KG P+++TYN++++ L ++GR ++ L + MK+ D +Y++L
Sbjct: 237 QGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSL 296
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L + +D + ++EM + + D++TY AL++ F R G I+ES L+ M ++
Sbjct: 297 ICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC 356
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++ Y I L + KV+ A++++E
Sbjct: 357 H-NVVSYNIFIRGLFENRKVEEAISVWE 383
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 23/185 (12%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
IF+ + +++ P+ ++ V RI+ + IK KCK T ++VL +L
Sbjct: 45 IFLLILRRLSDPKLVVHVTRIV----------------ELIKTQKCK---CTEDVVLTVL 85
Query: 149 GRVGRV---NDMLNEFASMKEA-GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+ N+ L+ F M+E G P SYN LLN + L+ + GI
Sbjct: 86 KAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGI 145
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
P+L TY LI + E+ L + M + ++P +Y Y ++I+ + K G + A+
Sbjct: 146 LPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALE 205
Query: 265 IFEEM 269
+F+EM
Sbjct: 206 VFDEM 210
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ + + K+L+ + Y + AF D ++ EE+V
Sbjct: 331 YNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELV 390
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + I N +I + K +++ AL ++D ++ + C PD +TY +++D LG++ R++
Sbjct: 391 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 450
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ M +AG+ P ++++ L+ K R D F M ESG+KPD L Y ++
Sbjct: 451 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVML 510
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
D F R+ + + L+ M + +P +Y+ L+ L K + D + ++M +
Sbjct: 511 DVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA 566
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + EV Q I N +I A ++ ++ A+ +F+ + +C+PDL TYN ++ +
Sbjct: 278 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSV 337
Query: 148 LGRVGRV----------------------NDMLNEFA-------------SMKEAGVVPD 172
GR G+ N +L FA + +AG D
Sbjct: 338 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 397
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+YNT+++ K+ RLDL L + EM G PD +TYT L+DS G+ I E+ ++
Sbjct: 398 GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 457
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++P++ + +LI K G+ D A F+ M S
Sbjct: 458 EMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVES 497
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 2/237 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS-DCYTNFARAFIMTDDCTQLLIFIEEV 94
+N ++ A AE+ + + I D+++ L + + RA I+ +L + ++E+
Sbjct: 785 WNALIHAYAESGLYEHARAIF-DIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQEL 843
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ S V ++ AFAK+ + + + I++ +K P++ Y I++ +L R
Sbjct: 844 QDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRF 903
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D+ A M+ AG PD + NTLL D + + + E+G++PD TY L
Sbjct: 904 RDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL 963
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I + R EE L +M ++ + P + Y+ L+ K + A +FEEM +
Sbjct: 964 IVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRT 1020
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL--DLCLIYFRE 198
+N ++ + R GR +D +M++ + PD +S+NTL+N K L + L E
Sbjct: 224 FNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHE 283
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ ++G++PD +TY LI + + N+++++ +F +M + RP ++ Y +++ + GK
Sbjct: 284 VRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 259 VDLAMTIFEEM 269
A +F+E+
Sbjct: 344 AQEAELMFKEL 354
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 72/170 (42%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V+N ++ + + ++ + ++ I +PD TYN ++ + R R +
Sbjct: 922 LVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLY 981
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + G+ P SY LL K + + + F EM G + + Y ++ +
Sbjct: 982 EMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNAR 1041
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
N ++ L + MK+ I P+I L+ + G D A + + SS
Sbjct: 1042 NHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSS 1091
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 106 VNRIIFA-----FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+NR I+ + +R KA + +K +P + T +I++ G G ++
Sbjct: 1025 LNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKV 1084
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
S+K + + + Y+T+L+ + R L + EM G++PD +T+ I
Sbjct: 1085 LNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFI 1139
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 17/267 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ CKAG A ++ +++ + +P D+D+ F+I+ L
Sbjct: 234 IDGHCKAGETEKACQIYARMKNDKVDIP--------------DVDIYFRIVDSELKEPNV 279
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
++ Y + +E + + I+ + +I F K ++++A +
Sbjct: 280 VT---YGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F + G C P++ TY+ ++D L + R++ L M E P+ + Y +++ L K
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ + D M E G P+++TYTA+ID FG+ G ++ L L M + P+
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
YR LI++ G +D A + EEM +
Sbjct: 457 YRVLINHCCAAGLLDDAHKLLEEMKQT 483
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 6/250 (2%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQL-LIFI 91
P +N ++ A + D ++++LK +++ Y T+D + +I +
Sbjct: 11 PMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGL 70
Query: 92 EEVVQIASPESIIVVNRI-IFAFAKS----RQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
E E +V+N++ + F + + EKA + + PD TY+ V+
Sbjct: 71 AERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIG 130
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L +V F MK G+ PD +Y TLL+ K+ ++ +F EM + G P
Sbjct: 131 YLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAP 190
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+++TYTALI ++ +T + + +F M P+I Y +LID K G+ + A I+
Sbjct: 191 NVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIY 250
Query: 267 EEMNSSLSDL 276
M + D+
Sbjct: 251 ARMKNDKVDI 260
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA V A LL+++ + PN Y+ ++ + +D + ++ +L
Sbjct: 286 VDGLCKAHKVKEARDLLETMSLEGC-EPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y++ L + ++++ + ++++ ++ K + ++A
Sbjct: 345 CSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAY 404
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ C P+++TY ++D G+ GRV+ L M G P+FI+Y L+N+
Sbjct: 405 RLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHC 464
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
LD EM ++ + Y +I+ F SL L ++ + P +
Sbjct: 465 CAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGSVPIL 522
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
VY+ LIDN K G++++A+ + EE++S
Sbjct: 523 PVYKLLIDNFIKAGRLEMALELHEELSS 550
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 126/299 (42%), Gaps = 45/299 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I+ CK G + A + + PN Y + D +DL+ ++L +L +S
Sbjct: 321 IDGFCKVGKLDEAQEVFTKMLGHGCS-PNVYTYSSLIDKLFKDKRLDLALKVLTKMLENS 379
Query: 64 RTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT TD+ +L++ +EE + P +++ +I F K+ +++
Sbjct: 380 CAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE--KGCYP-NVVTYTAMIDGFGKAGRVD 436
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE----------------- 160
+ L + + C P+ ITY ++++ G ++D +L E
Sbjct: 437 RCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVI 496
Query: 161 -------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE-SGIKP 206
A + E G VP Y L++N K RL++ L E+ S
Sbjct: 497 EGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ 556
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
+ TY +LI+S ++++ +L++DM ++ P + + LI L ++GK + A+ +
Sbjct: 557 N--TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G A RL+ + +K + PN Y ++ + +D ++L+ L++S
Sbjct: 391 VDGLCKVGKTDEAYRLMLMMEEKGCY-PNVVTYTAMIDGFGKAGRVDRCLELLQ--LMTS 447
Query: 64 RTLSSDCYT-----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + + T N A + DD +LL EE+ Q P+ I + ++I F S +
Sbjct: 448 KGCAPNFITYRVLINHCCAAGLLDDAHKLL---EEMKQTYWPKHIGMYRKVIEGF--SHE 502
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGVVPDFIS 175
+L + + P L Y +++D + GR+ ++ E +S A +
Sbjct: 503 FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN----T 558
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y +L+ +L ++D + +M G P+L LI R G EE+L+L + +
Sbjct: 559 YVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSIC 618
Query: 236 QQQIR 240
Q I
Sbjct: 619 QMDIH 623
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + EV Q I N +I A ++ ++ A+ +F+ + +C+PDL TYN ++ +
Sbjct: 118 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSV 177
Query: 148 LGRVGRV----------------------NDMLNEFA-------------SMKEAGVVPD 172
GR G+ N +L FA + +AG D
Sbjct: 178 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 237
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+YNT+++ K+ RLDL L + EM G PD +TYT L+DS G+ I E+ ++
Sbjct: 238 GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLE 297
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M ++P++ + +LI K G+ D A F+ M S
Sbjct: 298 EMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVES 337
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ + + K+L+ + Y + AF D ++ EE+V
Sbjct: 171 YNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELV 230
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + I N +I + K +++ AL ++D ++ + C PD +TY +++D LG++ R++
Sbjct: 231 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 290
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ M +AG+ P ++++ L+ K R D F M ESG+KPD L Y ++
Sbjct: 291 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVML 350
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
D F R+ + + L+ M + +P +Y+ L+ L K + D + ++M +
Sbjct: 351 DVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA 406
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL--DLCL 193
P + +N ++ + R GR +D +M++ + PD +S+NTL+N K L + L
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
E+ ++G++PD +TY LI + + N+++++ +F +M + RP ++ Y +++
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 254 KKMGKVDLAMTIFEEM 269
+ GK A +F+E+
Sbjct: 179 GRCGKAQEAELMFKEL 194
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 2/237 (0%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSS-DCYTNFARAFIMTDDCTQLLIFIEEV 94
+N ++ A AE+ + + I D+++ L + + RA I+ +L + ++E+
Sbjct: 625 WNALIHAYAESGLYEHARAIF-DIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQEL 683
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ S V ++ AFAK+ + + + I++ +K P++ Y I++ +L R
Sbjct: 684 QDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRF 743
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D+ A M+ AG PD + NTLL D + + + E+G++PD TY L
Sbjct: 744 RDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTL 803
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
I + R EE L +M ++ + P + Y+ L+ K + A +FEEM +
Sbjct: 804 IVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRT 860
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 72/170 (42%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++V+N ++ + + ++ + ++ I +PD TYN ++ + R R +
Sbjct: 762 LVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLY 821
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M + G+ P SY LL K + + + F EM G + + Y ++ +
Sbjct: 822 EMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNAR 881
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
N ++ L + MK+ I P+I L+ + G D A + + SS
Sbjct: 882 NHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSS 931
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE--S 227
+P +N ++ + R D M + I+PDL+++ LI++ ++G + +
Sbjct: 58 LPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVA 117
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L L ++++Q +RP Y +LI + +D A+ +FEEM +S
Sbjct: 118 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIAS 162
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 106 VNRIIFA-----FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+NR I+ + +R KA + +K +P + T +I++ G G ++
Sbjct: 865 LNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKV 924
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
S+K + + + Y+T+L+ + R L + EM G++PD +T+ I
Sbjct: 925 LNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFI 979
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 97.1 bits (240), Expect = 8e-18, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 96/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ E+V+ +++ NR+I ++ ++ + +A+ +FD ++ C+PD +TY ++DI
Sbjct: 401 LLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHA 460
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ L+ + M+EA + PD +Y+ ++N L K L F EM + G P+L+
Sbjct: 461 KAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLV 520
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N +L L+ DM+ +P Y +++ L G ++ A IF EM
Sbjct: 521 TYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEM 580
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 80/139 (57%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+P+++TYN ++ GR +N+ ++ F M+EAG PD ++Y TL++ K LD+ L
Sbjct: 410 CQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVAL 469
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+++M E+ + PD TY+ +I+ G+ G++ + +LF +M Q P++ Y +I
Sbjct: 470 HMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQ 529
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K A+ ++ +M ++
Sbjct: 530 AKARNYPTALELYRDMQNA 548
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 135 KPDLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
K D TY ++ ILGR G +N +L A M G P+ ++YN L+++ + L+
Sbjct: 376 KHDGHTYTTMVGILGRARQFGAINKLL---AEMVRDGCQPNVVTYNRLIHSYGRANYLNE 432
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ F M E+G +PD +TY LID + G ++ +L ++ M++ + P + Y +I+
Sbjct: 433 AVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIIN 492
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K G + A +F EM
Sbjct: 493 CLGKAGHLTSAHKLFCEM 510
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q P +++ N +I AK+R AL ++ ++ +PD +TY+IV+++L
Sbjct: 506 LFCEMVDQGCVP-NLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVL 564
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + F MK VPD Y L++ K+ ++ +++ M +G+ P++
Sbjct: 565 GHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNV 624
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R + ++ L M + ++PS+ Y L+
Sbjct: 625 PTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLL 666
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 74/161 (45%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + C P+L+TYNI++ + + L + M+ AG
Sbjct: 490 IINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAG 549
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM PD Y L+D +G+ GN+E+S
Sbjct: 550 FQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSW 609
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ M + P++ SL+ ++ ++ A + + M
Sbjct: 610 EWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSM 650
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 59/108 (54%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ L + R+ EM G +P+++TY LI S+GR +
Sbjct: 371 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYL 430
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ +F+ M++ +P Y +LID K G +D+A+ ++++M +
Sbjct: 431 NEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEA 478
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 35/272 (12%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN +L + + + Q+L ++ Y+ A+ I ++E+
Sbjct: 161 AYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 220
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
S V +RI+ F + +KA + + +PD YN+++D G+ +
Sbjct: 221 EADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL 280
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES------------ 202
++ F M+E G+ PD +++NTL++ K R D + F EM ES
Sbjct: 281 GHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIM 340
Query: 203 -----------------------GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
G+ P+++TYT L+D +GR+G +E++ MK +
Sbjct: 341 INLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGL 400
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+PS +Y +L++ + G D A+ + + M +
Sbjct: 401 KPSSTMYHALVNAYAQRGLADHALNVVKAMRA 432
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ + K ++ A + D + PD TY++++D R GR M+
Sbjct: 163 NALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA 222
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV P ++ +L R REM SG++PD Y +ID+FG+ +
Sbjct: 223 DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGH 282
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ F+ M+++ I P + + +LID K G+ D A+ +F+EM S
Sbjct: 283 AMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRES 328
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
++ +AG +A LL+ + + P++Y + +L + + +F +L+++ S
Sbjct: 201 VDAYTRAGRWESARILLKEMEADGV-KPSSYVFSRILAGFRDRGEWQKAFAVLREMHASG 259
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + + + + ++ N +I A K + ++A+
Sbjct: 260 VRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAI 319
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD ++ C TYNI++++LG R + A MKE G+VP+ I+Y TL++
Sbjct: 320 ELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVY 379
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R + M G+KP Y AL++++ + G + +L + M+ + S
Sbjct: 380 GRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST 439
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
V SLI+ + ++ A ++ + M
Sbjct: 440 VVLNSLINAFGEDRRIAEAFSVLQFM 465
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I AFA++R + AL + + + P ++ LG RV + F AG
Sbjct: 94 LISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAG 153
Query: 169 VV-PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ P +YN LL KI L EM + G+ PD TY+ L+D++ R G E +
Sbjct: 154 EIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 213
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L +M+ ++PS YV+ ++ + G+ A + EM++S
Sbjct: 214 RILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 258
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P N +I + ++ E + +K P++ITY ++D+ GR GR + ++
Sbjct: 331 PLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVD 390
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+MK G+ P Y+ L+N + D L + M G++ + +LI++FG
Sbjct: 391 CIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 450
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
I E+ + MK+ +RP + Y +L+ L ++ + + I+EEM +S
Sbjct: 451 EDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITS 503
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 1/206 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ CK G A+ L +R+ N L YN ++ E + +L ++
Sbjct: 303 NTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKE 362
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ YT + + + + IE + S + + ++ A+A+ +
Sbjct: 363 QGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADH 422
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL + ++ + + N +++ G R+ + + MKE G+ PD I+Y TL+
Sbjct: 423 ALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMK 482
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPD 207
L ++ + + + + EM SG PD
Sbjct: 483 ALIRVEQFEKVPVIYEEMITSGCAPD 508
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S +V+N +I AF + R+I +A + +K +PD+ITY ++ L RV + + +
Sbjct: 438 STVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIY 497
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRL 189
M +G PD + L + LR ++ +
Sbjct: 498 EEMITSGCAPDRKARAMLRSALRYMKHM 525
>gi|224576657|gb|ACN57002.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 87/152 (57%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ + +F+++ KP++ Y +++D + G V D + M + G PD ++Y+
Sbjct: 2 KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N L K R++ L YF+ +G+ + + Y++LID G+ G I+E+ RLF +M ++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y +LID L K GKVD AMT+F+ M
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 153
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 100/179 (55%), Gaps = 1/179 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 11 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 70
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 71 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 130
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ALID+ + G ++E++ LF M++++ ++Y Y LI + K + + A+ +++ M
Sbjct: 131 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEXALKLWDMM 189
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 97/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 126 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 185
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV+PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 186 RLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 245
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 246 TFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 305
Query: 270 N 270
+
Sbjct: 306 S 306
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A +FD +KGL P+ +T+ ++D + GRV+ + + M
Sbjct: 215 LINGLCKESKMDDANELFDEMLVKGLI--PNGVTFTTLIDGHCKNGRVDFAMEIYKRMLS 272
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
++PD I+YNTL+ L K L EM G+KPD TYT LID + G+++
Sbjct: 273 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDT 332
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M Q+ IR Y +LI L + G+ A + EM S
Sbjct: 333 AFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLS 377
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 21/276 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ + P+ +YN ++ +D F+ LK +++S
Sbjct: 146 MHRFCKDGDIRVAQSVFDAITKWGL-RPSVVSYNTLMNGYIRLGHLDEGFR-LKSAMLAS 203
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
L D YT + M DD +L F E +V+ P + +I K+
Sbjct: 204 GVLP-DVYTYSVLINGLCKESKM-DDANEL--FDEMLVKGLIPNGVTFTT-LIDGHCKNG 258
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFI 174
+++ A+ I+ + PDLITYN ++ L + G + +D+++E SMK G+ PD
Sbjct: 259 RVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMK--GLKPDKF 315
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K LD + + M + I+ D + Y ALI + G ++ ++ +M
Sbjct: 316 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREM 375
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 376 LSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 411
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 111/252 (44%), Gaps = 7/252 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
NGYI + G++ RL ++ + LP+ Y ++ + + + +D + ++ ++L
Sbjct: 182 NGYI----RLGHLDEGFRLKSAMLASGV-LPDVYTYSVLINGLCKESKMDDANELFDEML 236
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
V + +T + + ++ + +I N +I+ K ++
Sbjct: 237 VKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 296
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D + KPD TY ++D + G ++ M + + D ++Y L+
Sbjct: 297 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALI 356
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L + R REM G+KPD TYT +I+ F + G++ + +L +M++
Sbjct: 357 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHA 416
Query: 241 PSIYVYRSLIDN 252
PS+ Y L++
Sbjct: 417 PSVVTYNVLMNG 428
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 65/138 (47%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E + F + +L +L K++ L
Sbjct: 66 RSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 125
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 126 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 185
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 186 RLGHLDEGFRLKSAMLAS 203
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 129/269 (47%), Gaps = 12/269 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY-NCVLVASAETN-DIDLSFQILKDLL 60
N + C+ G ++ A RL+ + F PN+Y N L+ +N + D + ++L +++
Sbjct: 175 NTLVAGYCREGRLNDARRLVADMP----FAPNSYTNSTLLKGLCSNKEWDDAEELLSEMI 230
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + + + + + ++++ + +IV N II A+ ++E
Sbjct: 231 RSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVE 290
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+AL +FD + CKPD+ +YN V+ L R GR D A M PD +++NT++
Sbjct: 291 EALHLFDQ---MPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVI 347
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L +D + +M + G KPD TY+AL+++ G ++++L L + +
Sbjct: 348 SYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPW---K 404
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ YRS++ L + + D + EM
Sbjct: 405 PNTVCYRSVLKGLCRADRWDDVGKLVAEM 433
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+ E+ + II+ N +I F+++ ++ AL +F K + CK +++TYN +L L R
Sbjct: 465 LREMTKFGCSPDIIIYNSLINGFSENGSVDDALELF---KNMSCKRNVVTYNYMLKGLCR 521
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ D A M + +P+ ++++TL++ L + ++ + F +M + P+++
Sbjct: 522 AEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVII 581
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ LI+ ++++L+L NDM +P Y + + L + + + A + EM
Sbjct: 582 YSTLINGLSDQECVDDALKLLNDMP---CKPDTICYSAALKGLCRAERWEDAGELILEM 637
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 3/181 (1%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
I +V+ P + N +I ++ A+ + + + CKPD TY+ +++ L
Sbjct: 327 LIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALS 386
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
G V+D L ++ P+ + Y ++L L + R D EM + + D +
Sbjct: 387 ERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEV 443
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+ +ID + G ++ + +M + P I +Y SLI+ + G VD A+ +F+ M
Sbjct: 444 TFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM 503
Query: 270 N 270
+
Sbjct: 504 S 504
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 115/268 (42%), Gaps = 13/268 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I+ LC+ G V +L+ + +I + YN ++ +E +D + ++ K++
Sbjct: 449 IDCLCQKGLVDYGAEVLREMTKFGCSPDIII---YNSLINGFSENGSVDDALELFKNMSC 505
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ Y + + + E+V+ + + + +I + +E
Sbjct: 506 KRNVVT---YNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVEC 562
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ +F+ + C P++I Y+ +++ L V+D L M PD I Y+ L
Sbjct: 563 AIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMP---CKPDTICYSAALK 619
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R + EM PD +T++ LI++ G +E + + M + + P
Sbjct: 620 GLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMP 679
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++Y SLI+ + + + A+ + M
Sbjct: 680 NVFIYSSLINGFAEQYRAEDALQLLRNM 707
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D++TYN ++ R GR+ND A M A P+ + +TLL L + D
Sbjct: 170 DVVTYNTLVAGYCREGRLNDARRLVADMPFA---PNSYTNSTLLKGLCSNKEWDDAEELL 226
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM SG P+ LT+ +I S + G + ++ + + M + + + VY +I L ++
Sbjct: 227 SEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAEL 286
Query: 257 GKVDLAMTIFEEM 269
G+V+ A+ +F++M
Sbjct: 287 GRVEEALHLFDQM 299
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 109/266 (40%), Gaps = 9/266 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ G V A+ + + + N +PN Y+ ++ ++ +D + ++L D+
Sbjct: 551 ISYLCQKGFVECAIEVFEKMPKYNC-MPNVIIYSTLINGLSDQECVDDALKLLNDMPCKP 609
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T+ CY+ + + I E+++ + + +I +E A
Sbjct: 610 DTI---CYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESAT 666
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + +C P++ Y+ +++ R D L +M PD I Y+ L L
Sbjct: 667 EVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMP---CEPDTICYSAALKGL 723
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +R + EM D T++ LI S + G ++ + +F M P+
Sbjct: 724 CRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNR 783
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ SL++ + +VD + + M
Sbjct: 784 KIHSSLVNGYSEQRRVDEGLKLLSSM 809
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + + ++ + ++ +VQ +++ ++ K I+ A + + ++
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + D++ +N ++D L + V+D LN F M+ G+ P+ ++Y++L++ L R
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+L+T+ ALID+F + G E+ +L +DM ++ I P I+ Y SLI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A +FE M S
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVS 318
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 99/180 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++++V++ I +I + +A+ + D + C+P+L+TY +V++ L
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ N M+ A + D + +NT++++L K R +D L F+EM GI+P+++
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY++LI G ++ +L +DM +++I P++ + +LID K GK A + ++M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 17/276 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDL----- 59
+ LCK G++ A LL + I +N ++ + + +D + + K++
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+V+ +L S C ++ R D +QLL ++++ +++ N +I AF K
Sbjct: 217 RPNVVTYSSLIS-CLCSYGRW----SDASQLL---SDMIEKKINPNLVTFNALIDAFVKE 268
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +A + D + PD+ TYN +++ R++ F M PD +Y
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NTL+ K +R++ FREM G+ D +TYT LI G+ + + ++F M
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y L+D L GK++ A+ +F+ M S
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 5/237 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N I C + A ++ + + K+ F + YN ++ ++ ++ ++ +++
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-- 351
Query: 62 SSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S R L D YT + DC +++V P I+ + ++ + ++
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKAL +FD+++ + K D+ Y +++ + + G+V+D + F S+ GV P+ ++YNT+
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++ L R L ++M E G PD TY LI + R G+ S L +M+
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 7/252 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G S A +LL + +K I PN +N ++ A + + ++ D++
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLHDDMI--K 283
Query: 64 RTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R++ D +T + F M D + E +V + N +I F KS+++E
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+F + D +TY ++ L G ++ F M GV PD ++Y+ LL+
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L +L+ L F M +S IK D+ YT +I+ + G +++ LF + + ++P
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 242 SIYVYRSLIDNL 253
++ Y ++I L
Sbjct: 464 NVVTYNTMISGL 475
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 93/180 (51%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E++ ++ ++ N +I F + QI AL + + L +P ++T + +L+
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
R++D + M E G PD I++ TL++ L + + M + G +P+L+TY
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ + G+I+ + L N M+ +I + ++ ++ID+L K VD A+ +F+EM +
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 88/171 (51%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI N+++ A AK ++ + + + + ++ L +L TYNI+++ R +++ L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G P ++ ++LLN +R+ + +M E G +PD +T+T LI
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ L + M Q+ +P++ Y +++ L K G +DLA + +M ++
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
>gi|224576653|gb|ACN57000.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 87/152 (57%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ + +F+++ KP++ Y +++D + G V D + M + G PD ++Y+
Sbjct: 2 KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N L K R++ L YF+ +G+ + + Y++LID G+ G I+E+ RLF +M ++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y +LID L K GKVD AMT+F+ M
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 153
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 100/179 (55%), Gaps = 1/179 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 11 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 70
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 71 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 130
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ALID+ + G ++E++ LF M++++ ++Y Y LI + K + + A+ +++ M
Sbjct: 131 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMM 189
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 92/246 (37%), Gaps = 72/246 (29%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K+G+V A+RLL + D+ F P+ Y+ V+ + ++ + + +
Sbjct: 29 IDGYAKSGSVEDAIRLLHRMIDEG-FKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNG 87
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++S Y++ +I K+ +I++A
Sbjct: 88 LAINSMFYSS-----------------------------------LIDGLGKAGRIDEAE 112
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + C D YN ++D L + G+V++ + F M+E
Sbjct: 113 RLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE----------------- 155
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
E G + TYT LI + EE+L+L++ M + I P+
Sbjct: 156 -----------------EEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGITPTA 198
Query: 244 YVYRSL 249
+R+L
Sbjct: 199 ACFRAL 204
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 13/277 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G+ A LL+ L ++ I P+ YN V+ A + +D + +L ++
Sbjct: 185 MDGLCKKGHTQKAFDLLR-LMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEM--KQ 241
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ + D YT+ ++ E++ + + N +I K ++E
Sbjct: 242 KNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVED 301
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
A I ++ +P+ ITYN+V+D + G++GR + F SM + G+ PD ISY
Sbjct: 302 AEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI---FDSMIDKGIEPDIISYTA 358
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N + +++D + FRE+ ++G+KP ++T + L+ G E + F++M+
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAG 418
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
P++Y + +L+ K G V+ AM+ F ++ D
Sbjct: 419 HIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 132/276 (47%), Gaps = 23/276 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDID---------LSFQ 54
I+ CK G + A LL ++ KNI P+ Y ++ + + + +
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKNI-PPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLN 278
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF-IEEVVQIASPESIIVVNRIIFAF 113
I D+ + + C +D +++ + IE+ V+ P I N ++ +
Sbjct: 279 IYPDVCTFNSVIDGLCKEG------KVEDAEEIMTYMIEKGVE---PNEI-TYNVVMDGY 328
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
Q+ +A IFD + +PD+I+Y +++ +++ + F + + G+ P
Sbjct: 329 CLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSI 388
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++ + LL L ++ R + I+F EM +G P+L T+ L+ + + G +EE++ F+
Sbjct: 389 VTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHK 448
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++++ +I +Y ++I+ L K GK+D A FE++
Sbjct: 449 LERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKL 484
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+PD + Y V+D L + G + M++ PD YN +++ K LD
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGAT 233
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
EM + I PD++TYT+LID G+ E+ LF +M I P + + S+ID L
Sbjct: 234 SLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293
Query: 254 KKMGKVDLAMTIFEEM 269
K GKV+ A I M
Sbjct: 294 CKEGKVEDAEEIMTYM 309
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 121/286 (42%), Gaps = 11/286 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G V A ++ + +K + PN YN V+ + + +I ++
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMTYMIEKGV-EPNEITYNVVMDGYCLRGQMGRARRIFDSMI 345
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
YT ++ + + E+ Q SI+ + ++ + + E
Sbjct: 346 DKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTE 405
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A + FD ++ P+L T+ +L + G V + ++ F ++ + Y ++
Sbjct: 406 CAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVI 465
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K +LD F ++ G+ PD++TYTA+I + + G ++E+ + M+
Sbjct: 466 NGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCL 525
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKA 286
P Y ++ + KV EM + L ++AG K F +A
Sbjct: 526 PDNRTYNVIVRGFFRSSKVS-------EMKAFLKEIAG-KSFSFEA 563
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/115 (19%), Positives = 54/115 (46%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I + +I K+ +++KA F+ + + PD+ITY ++ + G +++ +
Sbjct: 457 NIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
M++ G +PD +YN ++ + ++ + +E+ + T L+D
Sbjct: 517 RKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMD 571
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 137/309 (44%), Gaps = 40/309 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I LC+ N+ A ++L+++ + + L YN ++ + + +D + Q+ D++
Sbjct: 461 NALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMI- 519
Query: 62 SSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
R D +T F + ++L ++++ I+ II + K++ +
Sbjct: 520 -KRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDM 578
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
KA + +P+ + YN ++ GR G ++D + +MK G+ P ++YN+L
Sbjct: 579 HKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSL 638
Query: 180 L-----------------------------------NNLRKIRRLDLCLIYFREMGESGI 204
+ KI ++D ++YF+EM GI
Sbjct: 639 MYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGI 698
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
P+ +TYT L+ ++ ++GN EE+ +LF++M I P Y +LI ++ +D +
Sbjct: 699 PPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVE 758
Query: 265 IFEEMNSSL 273
EM+S +
Sbjct: 759 SPAEMSSQV 767
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 84/161 (52%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A ++ +I+ A + ++ +P ++TYN+++D L + GRV + M E
Sbjct: 217 MIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V P +++ L++ L + ++ +EM GI P+ + Y +I R G+ E+L
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEAL 336
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LF++M + I+ ++ Y + L K G+++ A I +EM
Sbjct: 337 KLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEM 377
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 23/261 (8%)
Query: 21 LLQSLRDKNIFLPNA---------YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
LLQSL LP+A +N + VA+A D + DLLV + L+S
Sbjct: 97 LLQSLVADRASLPSARRLVSRLLRFNPLSVAAAAIADSHCT--ATADLLVRA-CLNSPAP 153
Query: 72 TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK- 130
+ +RA D F+E + ASP SI + ++ A Q++ A +F ++
Sbjct: 154 GSLSRA---AD------AFLELSARGASP-SIKTCSILVEALGCGGQLDVARKVFGEMRD 203
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G PD+ TY ++ L R G ++ A ++ +G+ P ++YN L++ L K R++
Sbjct: 204 GKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVE 263
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
M E ++P ++T+ LI R E + +M+ I P+ +Y +I
Sbjct: 264 EAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMI 323
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ G A+ +F+EM S
Sbjct: 324 GWHCRKGHCSEALKLFDEMVS 344
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 123/273 (45%), Gaps = 18/273 (6%)
Query: 7 EKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA------ETNDIDLSFQILKDLL 60
+ LCK G + A ++L D+ + +C L S T +DL ++++++L
Sbjct: 359 KALCKEGEMEHAEKIL----DEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREML 414
Query: 61 V----SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ L + C ++ ++ ++ +V+ ++ N +I +
Sbjct: 415 ARFLKPNDALMTACIQELCKSG-KHEEAAEIWF---QVLGKGLGVNVATSNALIHGLCQG 470
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++A + + + D ITYNI++ + ++++ + M + G PD ++
Sbjct: 471 NNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTF 530
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N L+ + +++ L +M G+KPD++TY +ID + + ++ ++ ++ +
Sbjct: 531 NIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMK 590
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+RP+ +Y +LI + G + A+ I + M
Sbjct: 591 NGLRPNAVIYNALIGGYGRNGNISDAIGILDTM 623
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 6/275 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+AG + AA +L LR I P YN ++ A ++ ++ +F+ LK +V
Sbjct: 218 IKALCRAGEIDAAFAMLAELRRSGI-QPTVVTYNVLMDALCKSGRVEEAFR-LKGRMVEG 275
Query: 64 RTLSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
R S + ++ ++E+ + ++ N +I + +A
Sbjct: 276 RVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEA 335
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN- 181
L +FD + K ++TYN++ L + G + M AG++ +N+++
Sbjct: 336 LKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAW 395
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+LR RLDL L REM +KP+ TA I ++G EE+ ++ + + +
Sbjct: 396 HLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGV 455
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
++ +LI L + + A + + M +S +L
Sbjct: 456 NVATSNALIHGLCQGNNMKEATKVLKAMVNSGVEL 490
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 111/268 (41%), Gaps = 3/268 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAETNDIDLSFQILKDL 59
C+ +E L G + A ++ +RD P + Y ++ A +ID +F +L +L
Sbjct: 178 CSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAEL 237
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S + Y A + + +V+ SI+ +I A+ +Q
Sbjct: 238 RRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQF 297
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ + ++G P+ + YN ++ R G ++ L F M G+ ++YN +
Sbjct: 298 GEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLI 357
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR-TGNIEESLRLFNDMKQQQ 238
L K ++ EM +G+ + +++ R TG ++ LRL +M +
Sbjct: 358 AKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARF 417
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
++P+ + + I L K GK + A I+
Sbjct: 418 LKPNDALMTACIQELCKSGKHEEAAEIW 445
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 3/214 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CKA ++ A L L KN PNA YN ++ +I + IL + +
Sbjct: 569 IDGYCKAKDMHKANEYLTELM-KNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNG 627
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + ++ + + +I II F K +I++A+
Sbjct: 628 IQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAV 687
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ F + P+ +TY ++ + G + F M G+VPD +SYNTL++
Sbjct: 688 MYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
++ LD + EM +K D +Y A +D
Sbjct: 748 CEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDG 781
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 1/182 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNI-FLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I + GN+S A+ +L +++ I P YN ++ ++ + +V
Sbjct: 601 NALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIV 660
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
L YT + F + +++ +E+ P + + ++FA++KS E+
Sbjct: 661 KDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEE 720
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD + L PD ++YN ++ V ++ M+ A M + D SYN ++
Sbjct: 721 ASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVD 780
Query: 182 NL 183
+
Sbjct: 781 GI 782
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 1/182 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKS-RQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F + + +I P ++ +N +I A ++ ++ L IF + C PD TY ++ L
Sbjct: 143 FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGL 202
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R GR+++ F M E P ++Y +L+N L + +D + Y EM GI+P++
Sbjct: 203 CRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNV 262
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY++L+D + G +++ LF M + RP++ Y +LI L K K+ A+ + +
Sbjct: 263 FTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR 322
Query: 269 MN 270
MN
Sbjct: 323 MN 324
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+L +F +K C P Y VL IL ++N + +M+E G+ P S N L+
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 182 NL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L R +D L F EM + G PD TY LI R G I+E+ +LF +M ++
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P++ Y SLI+ L VD AM EEM S
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 3/237 (1%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQ--LLIFIE 92
AY VL E N ++L+F+ K++ + +A D L IF+E
Sbjct: 123 AYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLE 182
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ P+S +I + +I++A +F + C P ++TY +++ L
Sbjct: 183 MPKRGCDPDSY-TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSK 241
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
V++ + MK G+ P+ +Y++L++ L K R + F M G +P+++TYT
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI + I+E++ L + M Q ++P +Y +I + K A +EM
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Query: 127 DHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
D I +K + +++ +I+L I GRV R D L F MK+ P +Y T+L L
Sbjct: 72 DLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT-GNIEESLRLFNDMKQQQIRPS 242
+ +L+L +++ M E G+ P + + LI + R G ++ L++F +M ++ P
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y +LI L + G++D A +F EM
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEM 218
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V + +P +++ +I S+ +++A+ + +K +P++ TY+ ++D L
Sbjct: 214 LFTEMVEKDCAP-TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGL 272
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ GR + F M G P+ ++Y TL+ L K +++ + M G+KPD
Sbjct: 273 CKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
Y +I F E+ ++M I P+
Sbjct: 333 GLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/276 (17%), Positives = 117/276 (42%), Gaps = 10/276 (3%)
Query: 3 NGYIEKLCKA-GNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDL 59
N I+ LC+ G V A +++ + + P++Y + S ID + ++ ++
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCD-PDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + YT+ + + + + ++EE+ ++ + ++ K +
Sbjct: 219 VEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+A+ +F+ + C+P+++TY ++ L + ++ + + M G+ PD Y +
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF-----GRTGNI-EESLRLFND 233
++ I + + EM GI P+ LT+ + + G N + L+
Sbjct: 339 ISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLS 398
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M+ + I + SL+ L K G+ A+ + +E+
Sbjct: 399 MRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 90/165 (54%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I F K + A+ FD ++ + +PD++T+N ++D + GR + + F M+E
Sbjct: 408 NVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRE 467
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ P +YN ++N L + R + EM E G+ P+++TYT L+D +GR+G +E
Sbjct: 468 SNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 527
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ MK ++PS +Y +L++ + G D A+ + + M +
Sbjct: 528 AIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKA 572
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 19 VRLLQSLRDKNIFLPN--AYNCVLVA---SAETNDIDLSFQILKDL----LVSSRTLSSD 69
+RLL LR+ + FLP+ +Y+ +L + + + D L ++L DL L L SD
Sbjct: 175 LRLLSLLREHD-FLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 70 CYTNFARAFI------------------MTDDCTQLLIFIEEVVQIASPESIIV------ 105
+ FARA + ++ T L+ + ++A E++ +
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAG 293
Query: 106 --------VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
N ++ + + ++ A + D + PD TY++++D R GR
Sbjct: 294 EIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M+ GV P ++ +L R REM SG++PD Y +ID+
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDT 413
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
FG+ + ++ F+ M++++I P + + +LID K G+ D AM +FEEM S
Sbjct: 414 FGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRES 468
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
++ +AG +A LL+ + + P++Y + +L + D +F +L+++ S
Sbjct: 341 VDAYTRAGRWESARILLKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + + + + ++ N +I A K + ++A+
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAM 459
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ ++ C P TYNI++++LG R + + MKE G+VP+ I+Y TL++
Sbjct: 460 ELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R + M G+KP Y AL++++ + G + +L + MK + SI
Sbjct: 520 GRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSI 579
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
V SLI+ + +V A ++ + M
Sbjct: 580 LVLNSLINAFGEDRRVVEAFSVLQFMK 606
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
EE+ + P N +I + + E + +K P++ITY ++D+ G
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R GR + ++ +MK G+ P Y+ L+N + D L + M G++ +L
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSIL 580
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LI++FG + E+ + MK+ +RP + Y +L+ L ++ + D I+EEM
Sbjct: 581 VLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEM 640
Query: 270 NSS 272
+S
Sbjct: 641 ITS 643
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 88/209 (42%), Gaps = 5/209 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP---NAYNCVLVASAETNDIDLSFQILKD 58
N I+ CK G A+ L + +R+ N P YN ++ E + +L +
Sbjct: 442 WNTLIDAHCKGGRHDRAMELFEEMRESNC--PPGTTTYNIMINLLGEQERWEGVEAMLSE 499
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + YT + + + + IE + S + + ++ A+A+
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ AL + +K + ++ N +++ G RV + + MKE G+ PD I+Y T
Sbjct: 560 ADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTT 619
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L+ L ++ + D + + EM SG PD
Sbjct: 620 LMKALIRVEQFDKVPVIYEEMITSGCAPD 648
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+V+N +I AF + R++ +A + +K +PD+ITY ++ L RV + + + +
Sbjct: 578 SILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIY 637
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRL 189
M +G PD + L + LR ++ +
Sbjct: 638 EEMITSGCAPDRKARAMLRSALRYMKHM 665
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 3/257 (1%)
Query: 15 VSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT 72
+ +A R+ + + + I P+ YN ++ E +F+ LK + + + Y
Sbjct: 230 IESAERVFEVMENGKIG-PDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYM 288
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
+A D L E+ + V + +I K + + +F+++
Sbjct: 289 TLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISK 348
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
CK ++ Y ++D + G + + + F MK+ G+ PD ++Y ++N+L K RLD
Sbjct: 349 GCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEA 408
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L Y G+ + + Y++LID G++G ++E+ R+F +M ++ P Y Y +LID
Sbjct: 409 LEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDA 468
Query: 253 LKKMGKVDLAMTIFEEM 269
L K GK+D A+ + + M
Sbjct: 469 LAKCGKIDEALALSKRM 485
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ C+ G A L+++ +N+ P+ Y ++ A D D + ++
Sbjct: 253 NTMIKGYCEVGKTRKAFEKLKAMELRNV-APDKITYMTLIQACYAEGDFDSCLGLYHEMD 311
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y+ + E ++ ++ + +I + AK +
Sbjct: 312 EKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMG 371
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN--EFASMKEAGVVPDFISYNT 178
+A+L+F +K +PD +TY ++++ L + GR+++ L EF S K GV + + Y++
Sbjct: 372 EAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGK--GVAVNAMFYSS 429
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ L K R+D F EM + G PD Y ALID+ + G I+E+L L M+
Sbjct: 430 LIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDG 489
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y LI L + + + A+T+++ M
Sbjct: 490 CDQTVYTYTILITGLFREHRNEEALTLWDLM 520
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 35/201 (17%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N ++ S+ IE A +F+ ++ K PD++TYN ++ VG+ +
Sbjct: 213 SLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKL 272
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI----------------- 204
+M+ V PD I+Y TL+ D CL + EM E G+
Sbjct: 273 KAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKD 332
Query: 205 ------------------KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
K ++ YTALIDS + GN+ E++ LF MK++ + P Y
Sbjct: 333 GKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTY 392
Query: 247 RSLIDNLKKMGKVDLAMTIFE 267
++++L K G++D A+ E
Sbjct: 393 GVIVNSLCKSGRLDEALEYME 413
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I +F +E+ L ++ +K +P L +YN +++ L + F M+
Sbjct: 183 NSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMEN 242
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ PD ++YNT++ ++ + + M + PD +TY LI + G+ +
Sbjct: 243 GKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDS 302
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L L+++M ++ + +VY +I L K GK T+FE M S
Sbjct: 303 CLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMIS 347
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F K + + + N ++ G +G V ++L + MKE G+ P SYN L+N L
Sbjct: 166 VFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLV 225
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ ++ F M I PD++TY +I + G ++ M+ + + P
Sbjct: 226 NSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKI 285
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +LI G D + ++ EM+
Sbjct: 286 TYMTLIQACYAEGDFDSCLGLYHEMD 311
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 69/133 (51%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
+L Y ++D+L G ++ + + F+ KE G++ S N+L+ + + ++ L +
Sbjct: 143 NLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVW 202
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
R M E+GI+P L +Y L++ + IE + R+F M+ +I P + Y ++I ++
Sbjct: 203 RRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEV 262
Query: 257 GKVDLAMTIFEEM 269
GK A + M
Sbjct: 263 GKTRKAFEKLKAM 275
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I KS ++++A IF + C PD YN ++D L + G++++ L M+ G
Sbjct: 430 LIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDG 489
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+Y L+ L + R + L + M + GI P + AL +G + +
Sbjct: 490 CDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARAC 549
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
++ ++M + P + +I+ L K G++ A
Sbjct: 550 KILDEMAPMGVIPET-AFDDMINILCKAGRIKEA 582
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 114/262 (43%), Gaps = 4/262 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K GN+ A+ L + ++ + + P+ Y ++ + ++ +D + + ++
Sbjct: 361 IDSNAKCGNMGEAMLLFKRMKKEGL-EPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKG 419
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+++ Y++ + + E+V+ P N +I A AK +I++AL
Sbjct: 420 VAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEAL 479
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ C + TY I++ L R R + L + M + G+ P ++ L L
Sbjct: 480 ALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGL 539
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ EM G+ P+ + +I+ + G I+E+ +L + + +
Sbjct: 540 CLSGKVARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEACKLADGIVDRGREIPG 598
Query: 244 YVYRSLIDNLKKMGKVDLAMTI 265
V LI+ L+K G DLA+ +
Sbjct: 599 RVRTVLINALRKAGNADLALKL 620
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
VN+I+ S +E L F H+ +K P +++ + L V +A K
Sbjct: 78 VNQILALLDGSSNMESNLDTFCHMFLIKLSPSFVSFILRSTELQTKPDVAIRFFTWAG-K 136
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ + Y +L++ L LD F + E G+ + + +LI SFG G +E
Sbjct: 137 QKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVE 196
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E L ++ MK+ I PS++ Y L++ L ++ A +FE M +
Sbjct: 197 EVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENG 243
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 124/262 (47%), Gaps = 1/262 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LC+ GNV AV + + + D+N Y+ ++ ID + +L ++ V +
Sbjct: 10 LCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPN 69
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ A D ++ ++ + + + N ++ +++KA+ + +
Sbjct: 70 PVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLN 129
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ KC P+ IT+ ++D + GR D + S++E G + SY++L++ L K
Sbjct: 130 RMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEG 189
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+ + + ++EM E G KP+ + Y+ALID R G +E+ +MK + P+ + Y
Sbjct: 190 KGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYS 249
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
SL+ + G + A+ +++EM
Sbjct: 250 SLMWGYFEAGDIHKAILVWKEM 271
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 128/273 (46%), Gaps = 11/273 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G++S A +L+ ++ K +PN YN ++ +D + +L + +
Sbjct: 74 NVLISALCKKGDLSRASKLVDNMFLKGC-VPNEVTYNSLVHGLCLKGKLDKAMSLL-NRM 131
Query: 61 VSSRTLSSD-CYTNFARAFIMTD---DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
V+++ + +D + F+ D ++L+ +EE + S + +I K
Sbjct: 132 VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFS---YSSLISGLFKE 188
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ E + ++ + CKP+ I Y+ ++D L R G+ ++ MK G P+ +Y
Sbjct: 189 GKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTY 248
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++L+ + + ++ ++EM ++ + Y+ LI+ + G ++E+L ++ M
Sbjct: 249 SSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLS 308
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I+ + Y S+I V+ M +F +M
Sbjct: 309 RGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQM 341
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 11/186 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC+ G A L +++K PN+ Y+ ++ E DI + + K++ +
Sbjct: 217 IDGLCREGKPDEAKEYLIEMKNKG-HTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDND 275
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
CY+ + LI ++++ ++ + +I F ++ +E+ +
Sbjct: 276 CNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGM 335
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+F+ + K +PD++TYNI+L+ V R D+LN +M + G PDFI+ +
Sbjct: 336 KLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILN---TMLDQGCDPDFITCDI 392
Query: 179 LLNNLR 184
L LR
Sbjct: 393 FLKTLR 398
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
I+ A + +++A+ +F + C D TY+ ++ L GR+++ ++ M+ G
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
P+ +++N L++ L K L M G P+ +TY +L+ G +++++
Sbjct: 66 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
L N M + P+ + +L+D K G+
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGR 155
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/240 (16%), Positives = 109/240 (45%), Gaps = 5/240 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ K G VR+L SL +K + N +Y+ ++ + + Q+ K+++
Sbjct: 147 VDGFVKHGRALDGVRVLVSLEEKG-YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG 205
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y+ + ++ E+ + + +++ + ++ I KA+
Sbjct: 206 CKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAI 265
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L++ + C + Y+I+++ L + G++ + L + M G+ D ++Y+++++
Sbjct: 266 LVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGF 325
Query: 184 RKIRRLDLCLIYFREM--GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ ++ + F +M ++PD++TY L+++F ++ ++ + N M Q P
Sbjct: 326 CNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDP 385
>gi|255579214|ref|XP_002530453.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529998|gb|EEF31923.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 391
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ A S ++ A+ ++ +K L C P+++TYN ++ +L GRV +
Sbjct: 207 VVSYNIVVRAVGLSEGVDFAMRVYREMKELGCMPNVVTYNTIIKLLCETGRVKEAYKMLD 266
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M++ G+V D I+Y+ L K + + L F M ESG++P + TY L+ FGR G
Sbjct: 267 DMRKKGIVADVITYHCFFRCLEKPKEI---LWLFDRMIESGVQPRMDTYVMLMRKFGRWG 323
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ L ++ M++Q P + Y +LID L + G + +A EEM
Sbjct: 324 FLRPVLLVWKKMEEQGCSPDEFAYNALIDALVQKGMLHMARRYEEEM 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N I+ + K K ++ + DL +Y+I +DI+ + G+ + + M
Sbjct: 139 IYNMILRGWFKMGWWSKCREFWEEMDQKGVHKDLHSYSIYMDIVCKGGKPWKAVKLYKEM 198
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K G+ D +SYN ++ + +D + +REM E G P+++TY +I TG +
Sbjct: 199 KRKGMKLDVVSYNIVVRAVGLSEGVDFAMRVYREMKELGCMPNVVTYNTIIKLLCETGRV 258
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ ++ +DM+++ I + Y L+K ++ + +F+ M S
Sbjct: 259 KEAYKMLDDMRKKGIVADVITYHCFFRCLEKPKEI---LWLFDRMIES 303
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 4/201 (1%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSS 63
Y++ +CK G AV+L + ++ K + L +YN V+ A + +D + ++ +++
Sbjct: 178 YMDIVCKGGKPWKAVKLYKEMKRKGMKLDVVSYNIVVRAVGLSEGVDFAMRVYREMKELG 237
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + T + ++++ + +I + K ++I L
Sbjct: 238 CMPNVVTYNTIIKLLCETGRVKEAYKMLDDMRKKGIVADVITYHCFFRCLEKPKEI---L 294
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD + +P + TY +++ GR G + +L + M+E G PD +YN L++ L
Sbjct: 295 WLFDRMIESGVQPRMDTYVMLMRKFGRWGFLRPVLLVWKKMEEQGCSPDEFAYNALIDAL 354
Query: 184 RKIRRLDLCLIYFREMGESGI 204
+ L + Y EM G+
Sbjct: 355 VQKGMLHMARRYEEEMLAKGL 375
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 76/151 (50%)
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
IE L F + G+ YN++L ++G + + M + GV D SY+
Sbjct: 118 IESQELCFGNNNGIDIVNKTKIYNMILRGWFKMGWWSKCREFWEEMDQKGVHKDLHSYSI 177
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ + K + + ++EM G+K D+++Y ++ + G + ++ ++R++ +MK+
Sbjct: 178 YMDIVCKGGKPWKAVKLYKEMKRKGMKLDVVSYNIVVRAVGLSEGVDFAMRVYREMKELG 237
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P++ Y ++I L + G+V A + ++M
Sbjct: 238 CMPNVVTYNTIIKLLCETGRVKEAYKMLDDM 268
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVL 145
L F +E+ + +++ N +I + K ++ ++A +KGL+ P+LIT+N+++
Sbjct: 3 LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLE--PNLITFNMII 60
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ L R GR+ + M G VPD ++YNTL+N K L+ EM +G+
Sbjct: 61 NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+++TYT+LI+S + GN+ ++ F+ M + + P+ Y ++I+ + G +D A +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Query: 266 FEEMNSS 272
EM S
Sbjct: 181 LNEMTRS 187
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+ NGY CK GN A+ +L + +N PN Y ++ + + +++ + +
Sbjct: 94 LVNGY----CKEGNFHQAL-VLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQ 148
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ V + YT F + + E+ + SI+ N +I +
Sbjct: 149 MHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGR 208
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A+ + + G PD+++Y+ ++ R ++ M V+PD ++Y++
Sbjct: 209 MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSS 268
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ L + RRL F+EM + PD TYT LI+++ + G++ ++L L ++M Q+
Sbjct: 269 LIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328
Query: 239 IRPSIYVYRSLIDNLKKMGK 258
P Y LI+ L K +
Sbjct: 329 FLPDAVTYNVLINGLNKQAR 348
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 124/271 (45%), Gaps = 7/271 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK A L+S+ K + PN +N ++ + + ++L ++
Sbjct: 22 NTMIDGYCKLKRTDEAFGFLRSMGLKGL-EPNLITFNMIINGLCRDGRLKETSEVLVEMS 80
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + + Q L+ E+V+ +++ +I + K+ +
Sbjct: 81 RKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLN 140
Query: 121 KALLIFD--HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+A+ FD H++GL C P+ TY +++ + G +++ M +G +P ++YN
Sbjct: 141 RAMEFFDQMHVRGL-C-PNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNA 198
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N + R++ + ++M G+ PD+++Y+ +I F R ++ + ++ +M +
Sbjct: 199 LINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKS 258
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P Y SLI L + ++ A +F+EM
Sbjct: 259 VLPDAVTYSSLIQGLCEQRRLTEACDMFQEM 289
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 114/249 (45%), Gaps = 3/249 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I +CKAGN++ A+ + + + PN Y ++ A+ +D ++++L ++ S
Sbjct: 130 INSMCKAGNLNRAMEFFDQMHVRGL-CPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S Y + + + ++++V ++ + II FA+++++++A
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAF 248
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + G PD +TY+ ++ L R+ + + F M + PD +Y TL+N
Sbjct: 249 QMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAY 308
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K L+ L EM + G PD +TY LI+ + +E+ RL + PS
Sbjct: 309 CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSA 368
Query: 244 YVYRSLIDN 252
Y +LI+N
Sbjct: 369 VTYNTLIEN 377
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC+ G + +L + K ++P+ YN ++ + + + + +++
Sbjct: 57 NMIINGLCRDGRLKETSEVLVEMSRKG-YVPDEVTYNTLVNGYCKEGNFHQALVLHAEMV 115
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + YT+ + + + + F +++ + II FA+ ++
Sbjct: 116 RNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLD 175
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + + + P ++TYN +++ +GR+ + + M GV+PD +SY+T++
Sbjct: 176 EAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + LD EM + PD +TY++LI + E+ +F +M ++
Sbjct: 236 SGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLP 295
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y +LI+ K G ++ A+ + +EM
Sbjct: 296 PDEFTYTTLINAYCKEGDLNKALHLHDEM 324
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/319 (18%), Positives = 120/319 (37%), Gaps = 53/319 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C G + A+ LLQ + K + LP+ +Y+ ++ A ++D +FQ+ +++
Sbjct: 197 NALINGHCVLGRMEEAIGLLQDMVGKGV-LPDVVSYSTIISGFARNQELDRAFQMKVEMI 255
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + Y++ + T+ +E++ I P +I A+ K +
Sbjct: 256 GKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLN 315
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGR--------------------------- 153
KAL + D + PD +TYN++++ L + R
Sbjct: 316 KALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLI 375
Query: 154 -------------------VNDMLNE----FASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+ +++E F SM P+ YN +++ +I +
Sbjct: 376 ENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVL 435
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++EM P +T AL+ + G E + D+ + + + L+
Sbjct: 436 KAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLV 495
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+ +K G +D+ + EM
Sbjct: 496 EINQKEGNMDMVFNLLTEM 514
>gi|341605775|gb|AEK82990.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605807|gb|AEK83006.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRM 183
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALXKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMSE 150
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 133/284 (46%), Gaps = 15/284 (5%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDL 59
C ++ LC +S A +L ++ K +PN C + ++ +I ++ ++ K++
Sbjct: 410 CTTLVKGLCMKHRISKATQLFLKMQ-KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468
Query: 60 LVSSRTLSSDCYTNFARAFIMTDD-CT-----QLLIFIEEVVQIASPESIIVVNRIIFAF 113
L + +C N I+ D C + +E+ + +I +I F
Sbjct: 469 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+S + + A +F+ + + +PD+ T+++++D+L + G+V + M + G +P+
Sbjct: 529 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 588
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++Y TL+ L R+ F +M + G PD++TY L+ +TGNI+ +L L
Sbjct: 589 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 648
Query: 234 MKQ------QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M +P + Y +ID L K G+ D A +F+EM +
Sbjct: 649 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKA 692
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 8/187 (4%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E +VQ I+ + +I +I +A +F +K L C+PD I Y ++ L
Sbjct: 32 LLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLC 91
Query: 150 RVGRVN-------DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+ G++N +MLN+ S P +SY+ +++ L K RR D F+EM
Sbjct: 92 QTGKINIALHLHQEMLND-TSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQ 150
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
G+ PD+++YT+LI F R+G E++ LFN+M IR + LID L K GKV A
Sbjct: 151 GMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEA 210
Query: 263 MTIFEEM 269
+ E M
Sbjct: 211 NELLEVM 217
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 17/282 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC +S A +L S++ K P+A Y ++ +T I+++ + +++L +
Sbjct: 52 IKGLCMKHRISEATQLFMSMK-KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT 110
Query: 64 RTLSSDCYTNFARAFIMTDDCTQ-------LLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
C I+ D + +F E Q P+ +I +I F +S
Sbjct: 111 SQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPD-VISYTSLIHGFCRS 169
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ EKA +F+ + + + D+ T ++++DIL + G+V + M + G + D ++Y
Sbjct: 170 GKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 229
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+TL+ L R+ F M + G +PD + Y L+ +TGNI +L+L +M
Sbjct: 230 STLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLN 289
Query: 237 Q------QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ +P++ Y +ID L K + D A +F+EM +
Sbjct: 290 DTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 331
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 131/281 (46%), Gaps = 17/281 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC +S A RL S++ K P+A Y ++ +T +I+ + Q+ +++L +
Sbjct: 233 IKGLCMKHRISEATRLFMSMQ-KLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDT 291
Query: 64 RTLSSDCYTNFARAFIMTDDCTQ-------LLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
C I+ D + +F E Q P+ +I +I F S
Sbjct: 292 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPD-VISYTTLIHGFCLS 350
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ EKA +F+ + + +PD+ T ++++D+L + G+V + + + G +PD ++
Sbjct: 351 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTC 410
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TL+ L R+ F +M + G P+++T L+ ++GNI+ +L L +M
Sbjct: 411 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 470
Query: 237 Q------QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P+ Y +ID L K G+ D A +F+EM +
Sbjct: 471 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKA 511
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 8/189 (4%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E ++Q + + ++ + +I +A +F ++ L C PD++TY ++ L
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634
Query: 150 RVGRVNDMLNEFASM-KEAGVV-----PDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+ G + L M + G PD ISY+ +++ L K R D F+EM G
Sbjct: 635 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 694
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+ P++++YT+LI F R+G +E++ LFN+M Q ++ + Y +I K G++D A+
Sbjct: 695 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Query: 264 TIFEEMNSS 272
F++M ++
Sbjct: 755 --FQKMEAN 761
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I F K ++ +A + + + C D++TY+ ++ L R+++ F SMK+ G
Sbjct: 16 LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 75
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREM----GESGI--KPDLLTYTALIDSFGRTG 222
PD I+Y TL+ L + ++++ L +EM + GI KP L++Y+ +ID +
Sbjct: 76 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDR 135
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ LF +MK Q + P + Y SLI + GK + A +F EM
Sbjct: 136 REDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI- 129
YT + M D ++ ++ ++ ++ ++ ++ I+ AL + +
Sbjct: 591 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650
Query: 130 -----KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
G KPD+I+Y+I++D L + GR ++ F MK GV+P+ ISY +L++
Sbjct: 651 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 710
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ +L+ F EM + G++ + +TY+ +I F + G I+++L
Sbjct: 711 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G+KCKP LI+Y+I++D L + R ++ F MK G++PD ISY TL++ + +
Sbjct: 295 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWE 354
Query: 191 LCLIYFREMGESGIKPDL-----------------------------------LTYTALI 215
F EM + GI+PD+ +T T L+
Sbjct: 355 KAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
I ++ +LF M++ P++ +L+ L + G + +A+ + + M S S
Sbjct: 415 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 473
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+PD+ T +++D+ + G+V + M + G + D ++Y+TL+ L R+
Sbjct: 7 QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL----FNDMKQQQI--RPSIYVYRS 248
F M + G +PD + Y L+ +TG I +L L ND Q I +P++ Y
Sbjct: 67 LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSI 126
Query: 249 LIDNLKKMGKVDLAMTIFEEMNSS 272
+ID L K + D A +F+EM +
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQ 150
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ PD + L++ K ++ M + G D++TY+ LI
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I E+ +LF MK+ RP Y +L+ L + GK+++A+ + +EM
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 106
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + + ++ + ++ +VQ +++ ++ K I+ A + + ++
Sbjct: 117 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 176
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + D++ +N ++D L + V+D LN F M+ G+ P+ ++Y++L++ L R
Sbjct: 177 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 236
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+L+T+ ALID+F + G E+ +L +DM ++ I P I+ Y SLI
Sbjct: 237 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
+ ++D A +FE M S
Sbjct: 297 NGFCMHDRLDKAKQMFEFMVS 317
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 99/180 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++++V++ I +I + +A+ + D + C+P+L+TY +V++ L
Sbjct: 101 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 160
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ N M+ A + D + +NT++++L K R +D L F+EM GI+P+++
Sbjct: 161 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 220
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY++LI G ++ +L +DM +++I P++ + +LID K GK A + ++M
Sbjct: 221 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 280
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 17/276 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDL----- 59
+ LCK G++ A LL + I +N ++ + + +D + + K++
Sbjct: 156 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 215
Query: 60 ---LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+V+ +L S C ++ R D +QLL ++++ +++ N +I AF K
Sbjct: 216 RPNVVTYSSLIS-CLCSYGRW----SDASQLL---SDMIEKKINPNLVTFNALIDAFVKE 267
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ +A + D + PD+ TYN +++ R++ F M PD +Y
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
NTL+ K +R++ FREM G+ D +TYT LI G+ + + ++F M
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ P I Y L+D L GK++ A+ +F+ M S
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 423
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 5/237 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N I C + A ++ + + K+ F + YN ++ ++ ++ ++ +++
Sbjct: 293 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-- 350
Query: 62 SSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
S R L D YT + DC +++V P I+ + ++ + ++
Sbjct: 351 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 410
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKAL +FD+++ + K D+ Y +++ + + G+V+D + F S+ GV P+ ++YNT+
Sbjct: 411 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 470
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++ L R L ++M E G PD TY LI + R G+ S L +M+
Sbjct: 471 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 7/252 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC G S A +LL + +K I PN +N ++ A + + ++ D++
Sbjct: 226 ISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLHDDMI--K 282
Query: 64 RTLSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R++ D +T + F M D + E +V + N +I F KS+++E
Sbjct: 283 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 342
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+F + D +TY ++ L G ++ F M GV PD ++Y+ LL+
Sbjct: 343 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 402
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L +L+ L F M +S IK D+ YT +I+ + G +++ LF + + ++P
Sbjct: 403 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 462
Query: 242 SIYVYRSLIDNL 253
++ Y ++I L
Sbjct: 463 NVVTYNTMISGL 474
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEK--ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
SI N+++ A AK ++ + +L + + L +P ++T + +L+ R++D +
Sbjct: 41 SIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 100
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
M E G PD I++ TL++ L + + M + G +P+L+TY +++
Sbjct: 101 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 160
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ G+I+ + L N M+ +I + ++ ++ID+L K VD A+ +F+EM +
Sbjct: 161 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 212
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM--LNEFASMKEAGV 169
++ K +++ A+ +F + + P + +N +L + ++ + + + L M + G
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P ++ ++LLN +R+ + +M E G +PD +T+T LI E++
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L + M Q+ +P++ Y +++ L K G +DLA + +M ++
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 178
>gi|449434360|ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
Length = 2802
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 98/180 (54%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
IF E +++ + N +I A+ + +KA+L F+H++ +PDL+T+N +L L
Sbjct: 1023 IFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTAL 1082
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G+ D + +A M+ + PD +SYN L + +R+ + +M E IKPD+
Sbjct: 1083 YRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDV 1142
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y LI SF + G++EE+ + + +K+ ++ P+ YR+L+ L + G D + + +E
Sbjct: 1143 HIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKE 1202
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 96/180 (53%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
IF E +++ +I N +I AF + ++KA+L F ++ +P+L+T+N +L L
Sbjct: 1403 IFREVPQEVSIKADVISYNIVINAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLTAL 1462
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G+ D +A+M+ + PD +SYN L + +R+ + +M E IKPD+
Sbjct: 1463 YRKGQFFDGERVWATMENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPDV 1522
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+Y LI F + G++EE+ + + +K+ ++ P YR L+ L + G D + + +E
Sbjct: 1523 YSYNILIKGFCQDGDLEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLCKE 1582
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 99/184 (53%), Gaps = 1/184 (0%)
Query: 86 QLLIFIEEVVQIASPES-IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
QL EV Q S E+ ++ N +I A+ K ++KA+L F+ ++ +P+L+T+N +
Sbjct: 1816 QLETIFREVPQEVSIEADVVSYNIVINAYCKMGALDKAILFFNDMEKNGTEPNLVTFNTL 1875
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
L L G+ D + +A M+ + PD ISYN L + +R+ + EM E I
Sbjct: 1876 LTALYSKGQFLDGESMWARMENKNIAPDLISYNARLQRMVLEKRIQDGIQLLAEMEEKAI 1935
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
KP++ +Y LI+ F G++E++ + + +K ++ P+ +YR+L+ + G D +
Sbjct: 1936 KPNVDSYYILIEGFCEDGDLEQAKQWYYKLKDNEVNPNASIYRTLLPLYCEKGDFDSGLR 1995
Query: 265 IFEE 268
+ +E
Sbjct: 1996 LCKE 1999
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNI 143
+Q +E+ ++ ++ N ++ + KS++ ++ IF + + L + D+ +YNI
Sbjct: 983 SQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNI 1042
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGES 202
V++ + + + F M++ G+ PD +++NTLL L RK + LD ++ R M
Sbjct: 1043 VINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR-MENK 1101
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
I PDL++Y A + I++ + L M++++I+P +++Y +LI + K G ++ A
Sbjct: 1102 NIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEA 1161
Query: 263 MTIFEEMNSSLSD 275
+ ++ S D
Sbjct: 1162 KKWYYKLKESEVD 1174
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNIVLDIL 148
+E+ ++ ++ N ++ + KS+++++ IF + + + K D+I+YNIV++
Sbjct: 1368 LFDELPELNCERTVKSFNSLLASCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAF 1427
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGESGIKPD 207
+ ++ + F M++ G+ P+ +++NTLL L RK + D ++ M I PD
Sbjct: 1428 CEMDALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVW-ATMENKNIAPD 1486
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
L++Y A + I++ + L M++++I+P +Y Y LI + G ++ A +
Sbjct: 1487 LVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYY 1546
Query: 268 EMNSSLSD 275
++ S D
Sbjct: 1547 KLKESEVD 1554
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 123/268 (45%), Gaps = 5/268 (1%)
Query: 11 KAGNVSAAVRLLQSLRD-KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
KAG S A +L L + K ++N +LV+ ++ + D +I +++ ++ +D
Sbjct: 978 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREV-PQELSIEAD 1036
Query: 70 --CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y A+ DD + ++F + + ++ N ++ A + Q ++
Sbjct: 1037 VSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWA 1096
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
++ PDL++YN L + R+ D + A M+E + PD YNTL+ + K
Sbjct: 1097 RMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDG 1156
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
L+ ++ ++ ES + P+ TY L+ G+ + L+L + ++ +
Sbjct: 1157 DLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQ 1216
Query: 248 SLIDNLKKMGKVDLAMTIFEEM-NSSLS 274
++D L ++ K + A + ++M +SSLS
Sbjct: 1217 RVVDGLAEVSKTEEAKDLLKKMFSSSLS 1244
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM- 164
R+I + K+ A +FD + L C+ + ++N +L + ++ + F +
Sbjct: 1349 ATRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNSLLASCVKSKELDQVEKIFREVP 1408
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+E + D ISYN ++N ++ LD +++F +M ++G++P+L+T+ L+ + R G
Sbjct: 1409 QEVSIKADVISYNIVINAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQF 1468
Query: 225 EESLRLFNDMKQQQIRPSIYVYRS 248
+ R++ M+ + I P + Y +
Sbjct: 1469 FDGERVWATMENKNIAPDLVSYNA 1492
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 112/255 (43%), Gaps = 4/255 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
KAG S A +L L + N ++N +L + ++ ++D +I +++ ++ +D
Sbjct: 1358 KAGMFSHARKLFDELPELNCERTVKSFNSLLASCVKSKELDQVEKIFREV-PQEVSIKAD 1416
Query: 70 --CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y AF D + ++F ++ + +++ N ++ A + Q ++
Sbjct: 1417 VISYNIVINAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWA 1476
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
++ PDL++YN L + R+ D + A M+E + PD SYN L+ +
Sbjct: 1477 TMENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDG 1536
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
L+ ++ ++ ES + P TY L+ G+ + L+L + + +
Sbjct: 1537 DLEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQ 1596
Query: 248 SLIDNLKKMGKVDLA 262
++D L ++ K + A
Sbjct: 1597 RVVDGLAEVSKTEEA 1611
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 77/181 (42%), Gaps = 19/181 (10%)
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM--- 164
R+I + K+ A +FD + L C+ + ++N +L + F +
Sbjct: 1750 RLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNALLTSCANSKEFEQLETMFREVPCA 1809
Query: 165 ----------------KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+E + D +SYN ++N K+ LD +++F +M ++G +P+L
Sbjct: 1810 NSKEFDQLETIFREVPQEVSIEADVVSYNIVINAYCKMGALDKAILFFNDMEKNGTEPNL 1869
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+T+ L+ + G + ++ M+ + I P + Y + + + ++ + + E
Sbjct: 1870 VTFNTLLTALYSKGQFLDGESMWARMENKNIAPDLISYNARLQRMVLEKRIQDGIQLLAE 1929
Query: 269 M 269
M
Sbjct: 1930 M 1930
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 5/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC---VLVASAETNDIDLSFQILKDL 59
N I L +G A ++ +S+ N+ LP+ C V+V + ++Q + +
Sbjct: 272 NAAISGLLSSGRCEDAWKVYESMEADNV-LPDHVTCSIMVIVMRKLGHSAKDAWQFFEKM 330
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ ++F + ++ LI + E+ + + IV N ++ A+ KS ++
Sbjct: 331 NGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRV 390
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A +F +K K T+NI++ R + + A M++AG+ P+ SY L
Sbjct: 391 EEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTCL 450
Query: 180 LNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ K + + D+ F +M + GIKP +YTALI ++ +G E++ F +M+++
Sbjct: 451 ISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREG 510
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+PSI Y +L+D ++ G M I++ M
Sbjct: 511 IKPSIETYTALLDAFRRAGDTQTLMKIWKLM 541
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 114/273 (41%), Gaps = 4/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLV 61
N ++ CK+ V A L ++ K I A +N ++ A + ++ +++ ++
Sbjct: 378 NTLMDAYCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQD 437
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLI--FIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ ++ YT A+ + + + F++ P S +I A++ S
Sbjct: 438 AGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSH-SYTALIHAYSVSGWH 496
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
EKA F++++ KP + TY +LD R G ++ + M+ V +++NTL
Sbjct: 497 EKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRVTFNTL 556
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ K + G+ P ++TY L++++ R G + L +M +
Sbjct: 557 VDGFAKHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNL 616
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+P Y ++I ++ A +EM S
Sbjct: 617 KPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKS 649
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 99 SPESIIVVNR---IIFAF-AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
S E +V R ++F K+R +K +L+F ++ + D+ YN + L GR
Sbjct: 225 SQEPSLVTPRACTVLFPLLGKARMGDKLMLLFTNLPSGREFRDVHVYNAAISGLLSSGRC 284
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKI-RRLDLCLIYFREMGESGIKPDLLTYTA 213
D + SM+ V+PD ++ + ++ +RK+ +F +M G+K A
Sbjct: 285 EDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGA 344
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
LI SF G + E+L + ++++++ + + VY +L+D K +V+ A +F EM +
Sbjct: 345 LIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKT 402
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE 93
++Y ++ A + + + ++ +++ S + YT AF D TQ L+ I +
Sbjct: 481 HSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGD-TQTLMKIWK 539
Query: 94 VVQIASPESI-IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+++ E + N ++ FAK ++A + + P ++TYN++++ R G
Sbjct: 540 LMRRYKVEGTRVTFNTLVDGFAKHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGG 599
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ + + M + PD ++Y+T++ ++R Y +EM +SG D +Y
Sbjct: 600 QHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKSGQVIDFNSYQ 659
Query: 213 AL 214
L
Sbjct: 660 KL 661
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR-VNDMLNEF 161
+ V N I S + E A +++ ++ PD +T +I++ ++ ++G D F
Sbjct: 268 VHVYNAAISGLLSSGRCEDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFF 327
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M GV L+ + + LI E+ + G+ + + Y L+D++ ++
Sbjct: 328 EKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKS 387
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+EE+ LF +MK + I+ + + L+ + + ++ + EM +
Sbjct: 388 NRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDA 438
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 137/305 (44%), Gaps = 39/305 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I LC+A V A ++L+ + +++I +PN Y +L +N L+ ++ +++
Sbjct: 92 NGIITGLCRASRVMDAYKVLEKMVEESI-VPNVFTYTILLNGLCRSNKTKLAREVFQEMK 150
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + + + L + E + P +I I+ K+ +++
Sbjct: 151 RNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLD 210
Query: 121 KALLIFDHIKGLKCKPDLITY-NIV----------------------------------- 144
AL + ++ + +P+ +TY N+V
Sbjct: 211 DALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGY 270
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
LD L + G ++ ++++GVVPD ++Y+ L+N + + D L +M +G+
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
KPD++TY+ LI+ + +++ RL M+ P++ Y S++D L K GK+D
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 265 IFEEM 269
++E M
Sbjct: 391 VYEMM 395
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 136/272 (50%), Gaps = 8/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASA--ETNDIDLSFQILKDLLVS 62
I+ L +AG + A+R++ + +++ LP + C + + + +D + + ++++
Sbjct: 165 IQHLSRAGEIDEALRVM--IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQM 222
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEE--VVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y+N F + +++ F EE + S E+ + A K+ ++
Sbjct: 223 GVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG-YLDALCKAGYLD 281
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + ++ PD++TY+++++ R G+ + L M+ GV PD ++Y+TL+
Sbjct: 282 RARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLI 341
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K R+ M +G P+++TY +++D ++G ++E R++ M + +
Sbjct: 342 NVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCS 401
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y +++ L K G +D A+ +FE + SS
Sbjct: 402 PDVVTYSIIMNGLSKAGMLDSAVKLFELIKSS 433
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 136/276 (49%), Gaps = 4/276 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C + LCKA + A++ ++ +R + PN Y+ ++ + ++D + ++
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGV-RPNEVTYSNLVHGFRQHGELDRVIRFFEEE 254
Query: 60 LV-SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L + Y + A + +EE+ Q ++ + +I FA++ Q
Sbjct: 255 KARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQ 314
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +L + + ++ KPD++TY+ ++++L + + D M+ AG P+ ++YN+
Sbjct: 315 FDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNS 374
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K ++D + M +S PD++TY+ +++ + G ++ +++LF +K +
Sbjct: 375 VMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSR 434
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
P Y +I +L + GK++ A ++ M +++
Sbjct: 435 EGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVA 470
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
Q L + E+ + +P ++ + N II ++ ++ A + + + P++ TY I+L
Sbjct: 72 QALELVRELSGVYTP-TVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILL 130
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ L R + F MK G P+ I+Y TL+ +L + +D L E +
Sbjct: 131 NGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELP 190
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D++T T ++ + ++++L+ +M+Q +RP+ Y +L+ ++ G++D +
Sbjct: 191 TDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRF 250
Query: 266 FEE 268
FEE
Sbjct: 251 FEE 253
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E++V+ + ++ ++ +S + + A +F +K CKP+ ITY ++ L R
Sbjct: 111 LEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSR 170
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G +++ L + + D I+ T++ L K RLD L + EM + G++P+ +T
Sbjct: 171 AGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVT 230
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRP-SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ L+ F + G ++ +R F + K ++ Y +D L K G +D A EE+
Sbjct: 231 YSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEEL 290
Query: 270 NSS 272
S
Sbjct: 291 RQS 293
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P + YN ++ L R RV D M E +VP+ +Y LLN L + + L
Sbjct: 86 PTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREV 145
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F+EM +G KP+ +TY LI R G I+E+LR+ + + ++ + +++ L K
Sbjct: 146 FQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK 205
Query: 256 MGKVDLAMTIFEEM 269
++D A+ EEM
Sbjct: 206 ASRLDDALKFMEEM 219
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
TY +V+D L G N L + +GV P YN ++ L + R+ +
Sbjct: 56 TYKLVVDGLCGAGMANQALELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEK 113
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M E I P++ TYT L++ R+ + + +F +MK+ +P+ Y +LI +L + G+
Sbjct: 114 MVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGE 173
Query: 259 VDLAMTIFEEMNS 271
+D A+ + E S
Sbjct: 174 IDEALRVMIEQRS 186
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 128/279 (45%), Gaps = 17/279 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ K+ A+ +L+ + + N F P+ YN ++ A +L+D L
Sbjct: 289 NALLDVYGKSRRPKEAMEVLKQM-ESNSFRPSVVTYNSLVSAYVRGG-------LLEDAL 340
Query: 61 VSSRTLSSD-------CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
V R + YT F+ + EE+ ++ +I N +I +
Sbjct: 341 VLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMY 400
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ E+ + +F IK KC PD++T+N +L + G+ G +++ F MK + P+
Sbjct: 401 GDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPER 460
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++NTL++ + D + ++ M E+G+ PDL TY A++ + R G E+S ++ +
Sbjct: 461 DTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAE 520
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
MK +P+ Y SL+ +V+ + EE+ S
Sbjct: 521 MKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSG 559
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 8/266 (3%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETN-----DIDLSFQILKDLLVSS 63
L K G VS A LL +L + + F + Y + +A N D F +K++
Sbjct: 154 LGKTGRVSRAASLLHNL-EADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEP 212
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ + N M +++ ++++ + N +I E+AL
Sbjct: 213 TLITYNAILNVYGKMGMP--WAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEAL 270
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ IK +PD +TYN +LD+ G+ R + + M+ P ++YN+L++
Sbjct: 271 DLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAY 330
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ L+ L+ R+M + GIKPD+ TYT L+ F G E ++ +F +M++ +P+I
Sbjct: 331 VRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNI 390
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LI GK + + +F+E+
Sbjct: 391 CTFNALIKMYGDRGKFEEMVKVFKEI 416
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 124/263 (47%), Gaps = 4/263 (1%)
Query: 10 CKAGNV-SAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C+AG++ A+ L + ++ F P+A YN +L ++ + ++LK + +S
Sbjct: 260 CRAGSLYEEALDLFEEIKVAG-FRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRP 318
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + A++ L+ ++V + ++ F + + E A+ +F
Sbjct: 319 SVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVF 378
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ ++ + CKP++ T+N ++ + G G+ +M+ F +K PD +++NTLL +
Sbjct: 379 EEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQN 438
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F EM S P+ T+ LI ++GR G+ ++++ + M + + P + Y
Sbjct: 439 GMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTY 498
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+++ L + G + + + EM
Sbjct: 499 NAVLATLARGGLWEQSEKVLAEM 521
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ L EE+ + N ++ + KSR+ ++A+ + ++ +P ++TYN ++
Sbjct: 268 EALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLV 327
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
R G + D L M + G+ PD +Y TLL+ + +L + F EM + G K
Sbjct: 328 SAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCK 387
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P++ T+ ALI +G G EE +++F ++K + P I + +L+ + G +
Sbjct: 388 PNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGV 447
Query: 266 FEEMNSS 272
FEEM S
Sbjct: 448 FEEMKRS 454
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+I V I+ K+ ++ +A + +++ + D+ Y ++ + D L F
Sbjct: 145 SVIAV--IVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVF 202
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF-REMGESGIKPDLLTYTALIDSFGR 220
MKE G P I+YN +LN K+ +I ++M G+ PDL TY LI S R
Sbjct: 203 GKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLI-SCCR 261
Query: 221 TGNI-EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G++ EE+L LF ++K RP Y +L+D K + AM + ++M S+
Sbjct: 262 AGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESN 314
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A+ + ++A+ + + PDL TYN VL L R G A MK+
Sbjct: 464 NTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKD 523
Query: 167 AGVVPDFISYNTLLN---NLRKIRRLD--------------------LCLI--------- 194
G P+ ++Y++LL+ N R++ R++ L L+
Sbjct: 524 GGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVE 583
Query: 195 ---YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
F E + GI PD+ T A++ +GR + ++ + N M + + S+ Y SL+
Sbjct: 584 TERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMY 643
Query: 252 NLKKMGKVDLAMTIFEEM 269
+ + IF E+
Sbjct: 644 MYSRTENFHKSEQIFREI 661
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 120/277 (43%), Gaps = 17/277 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L + G + ++L ++D PN Y+ +L A A +++ + ++
Sbjct: 499 NAVLATLARGGLWEQSEKVLAEMKDGGC-KPNEVTYSSLLHAYANGREVERMNALAEE-- 555
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAK 115
+ S T+ + + + ++ + LL+ F+E + SP+ + N ++ + +
Sbjct: 556 IYSGTIKT--HAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPD-VTTSNAMLSIYGR 612
Query: 116 SRQIEKA--LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+ + KA +L F + GL L +YN ++ + R + F + + G+ PD
Sbjct: 613 KKMVPKANEILNFMYESGLTL--SLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDV 670
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
ISYN ++ + +D EM PD++TY I ++ E++ +
Sbjct: 671 ISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRY 730
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
M +Q +P+ Y S++D K+ D A + + +
Sbjct: 731 MIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLG 767
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 68/148 (45%)
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
+IL + S TLS Y + + T++ + E++ +I N +I+A+
Sbjct: 621 EILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAY 680
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
++ +++A I + +K PD++TYN + + ++ M + G P+
Sbjct: 681 CRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNH 740
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+YN++++ K++ D + + +G+
Sbjct: 741 NTYNSIVDWYCKLKLRDEACSFVQNLGD 768
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 10 CKAGNV-SAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
C+ G + A ++ +R F P+ +N +L + D + +LK++ +
Sbjct: 259 CRRGALYKEAAKVFDEMRAAG-FEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPP 317
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S Y + +++ + EE+ +I +I ++ +I+ A+ +
Sbjct: 318 SVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTY 377
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D + CKP+L TYN ++ + G G+ +M+ F ++ AG VPD +++NTLL +
Sbjct: 378 DEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQN 437
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F+EM +SG P+ TY +LI S+ R G ++S+ ++ M + I P I Y
Sbjct: 438 GLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTY 497
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+++ L + G+ + A +F EM
Sbjct: 498 NAVLSALARGGRWEQAEKLFAEM 520
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK-SRQIEKALLIF 126
+ YT AF + +V +I+ N ++ ++K + + + +
Sbjct: 178 ASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALV 237
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
D +K D TYN ++ R + F M+ AG PD +++N+LL+ K
Sbjct: 238 DSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKA 297
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
R D + +EM G P ++TY +LI S+ + G ++E+ L +M+ + I+P + Y
Sbjct: 298 RMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITY 357
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+LI L + GK+D A+ ++EM
Sbjct: 358 TTLISGLDRAGKIDAAIGTYDEM 380
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ N ++ + K+R ++A+ + ++ C P ++TYN ++ + G +L E A
Sbjct: 285 VTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDG----LLKEAAE 340
Query: 164 MKEA----GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+KE G+ PD I+Y TL++ L + ++D + + EM +G KP+L TY ALI G
Sbjct: 341 LKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHG 400
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G E + +F+D++ P + + +L+ + G +F+EM S
Sbjct: 401 VRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKS 453
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V+N ++ + K+R ++K I +KG TYN ++ + R+G N
Sbjct: 599 INVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILT 658
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K +G PD SYNT++ + ++ F EM SG+ PD++TY + S+
Sbjct: 659 EIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANS 718
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
EE++ L M + +P+ Y S++ + GK+
Sbjct: 719 MFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKI 755
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 91 IEEVVQIASPESI----IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
+EE++ + SI N ++ +++ EK I IK +PD +YN ++
Sbjct: 618 VEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIY 677
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
GR G++ + F+ MK +G++PD ++YN + + + + R M G KP
Sbjct: 678 AYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKP 737
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ TY +++ + R G I ++ +++ Q+ P I
Sbjct: 738 NERTYNSILQEYCRHGKIADAKSFLSNLP--QLHPGI 772
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 13/238 (5%)
Query: 34 NAYNCVLVASAETNDIDLS---FQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
+ YN VL A A + + F +++L LS Y++ A+ ++
Sbjct: 495 STYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELS---YSSLLHAYANAKKLDKMKAL 551
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
E++ +V ++ +K + + F + +C D+ N ++ + G+
Sbjct: 552 SEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGK 611
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
V + + MK + + +YN+L++ ++ + C E+ SG +PD +
Sbjct: 612 NRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYS 671
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y +I ++GR G ++E+ RLF++MK + P I Y + K +A ++FEE
Sbjct: 672 YNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFV-------KSYVANSMFEE 722
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 31 FLPN--AYNCVLVASAETNDIDLSFQ-ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQL 87
F+P+ +N +L + N +D + K++ S D Y + ++ Q
Sbjct: 420 FVPDVVTWNTLLAVFGQ-NGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQS 478
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
+ + +++ I N ++ A A+ + E+A +F ++ L C+PD ++Y+ +L
Sbjct: 479 MEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHA 538
Query: 148 LGRVGRVNDM--LNE--FASMKEA--GVVPDFISYNTLLNNLRKIRRLDLCL-------- 193
+++ M L+E +A E+ G+V + N+ +NNL + + L L
Sbjct: 539 YANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLD 598
Query: 194 ---------IYFRE------------MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+Y + M S I TY +L+ + R G+ E+ +
Sbjct: 599 INVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILT 658
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++K RP Y Y ++I + G++ A +F EM SS
Sbjct: 659 EIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSS 698
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+L R GR+ D + E PD +Y L++ + R + FR M +GI+P
Sbjct: 156 VLARAGRLADASALLDAAPE----PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQP 211
Query: 207 DLLTYTALIDSFGRTG-NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
++TY ++ + + ++ + L + MK I Y Y +LI ++ A +
Sbjct: 212 AIVTYNVVLHVYSKIAVPWKDVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKV 271
Query: 266 FEEMNSS 272
F+EM ++
Sbjct: 272 FDEMRAA 278
>gi|399107208|gb|AFP20368.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 21 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 80
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K ++ L YF+ +G+ + Y++LID G+ G I
Sbjct: 81 IDEGFKPDVVTYSVVVNGLCKNGXVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRI 140
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVD AMT+F+ M
Sbjct: 141 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 43 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 102
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G V + L+ F + + G+ + Y++L++ L K R+D F EM E G D Y
Sbjct: 103 GXVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 162
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 163 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 207
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 7 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G V+ A+ F+
Sbjct: 66 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGXVEEALDYFQ 113
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 3 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 62
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 63 GYAKSGSVEDAIRLLHRM 80
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 15/273 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ K P+ +YN ++ D+D F++ +L S
Sbjct: 143 MHRFCKDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 201
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD +L F E +V+ P + +I K+
Sbjct: 202 --VQPDVYTYSVLINGLCKESKM-DDANEL--FDEMLVKGLVPNGVTFTT-LIDGHCKNG 255
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ I+ + PDLITYN ++ L + G + + M G+ PD I+Y
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 315
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ K LD + + M + I+ D + YTAL + G ++ ++ +M
Sbjct: 316 TLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSV 375
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 376 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 64/138 (46%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ DJ ++ ++ G + D + + +E F + +L +L K++ L
Sbjct: 63 RSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 183 RLGDLDEGFRLKSAMLAS 200
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 3/279 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N ++ L K +V A + + L+ F ++N ++ + +D +++I+ ++ S
Sbjct: 304 NVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKS 363
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YT F A D + + ++ ++I I+ A K++QI +A
Sbjct: 364 GLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEA 423
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L +++ +K C PD Y+ ++ ILG+ GR+ D+ M++ GV PD ++YNTL++
Sbjct: 424 LKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISC 483
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ + L +M E KPDL TY L+ F R ++ L + M + +
Sbjct: 484 ACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIE 543
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
Y L+ L + GK+ LA + F EM LS PKD
Sbjct: 544 AGTYAILVRGLCENGKLHLACSFFGEM---LSKAMVPKD 579
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYN++++ L K + L EM L T + +I R G +E++ F ++
Sbjct: 232 SYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNI 291
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
++ I L+D L K V+ A +F E+ S+
Sbjct: 292 EKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 330
>gi|302780413|ref|XP_002971981.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
gi|300160280|gb|EFJ26898.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
Length = 294
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 90/168 (53%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N + F + +++ LL+ + ++ KC PD+ITYN ++D L + GRV + F
Sbjct: 11 NMVTYNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTGRVPEANRLF 70
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK D I Y+ L+ K+ R+++ F + + I PD++T++ L++ +
Sbjct: 71 GDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQAILPDVVTFSTLVEGYCNA 130
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++++ RL +M P +Y Y SL+D K+G++ A + + M
Sbjct: 131 GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 178
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + + F M + L+ +EE+ II N +I K+ ++ +A +F +K
Sbjct: 15 YNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTGRVPEANRLFGDMK 74
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C D+I Y+ ++ ++ R+N F + ++PD ++++TL+ +D
Sbjct: 75 AKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQAILPDVVTFSTLVEGYCNAGLVD 134
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
EM S PD+ TYT+L+D F + G + E+ R+ M ++ +P+ V SLI
Sbjct: 135 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN--VVWSLI 192
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
G ++ A + E +
Sbjct: 193 GGFCGTGDLEEARKMLERLE 212
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%)
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G+ P+ ++YN+L + R+D L+ EM + PD++TY LID +TG + E+
Sbjct: 7 GIEPNMVTYNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTGRVPEA 66
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
RLF DMK + + +Y LI K+ ++++A T+F++
Sbjct: 67 NRLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDD 107
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+P+++TYN + RV+ L M+ +PD I+YNTL++ L K R+
Sbjct: 9 EPNMVTYNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTGRVPEANR 68
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F +M D++ Y+ LI F + I + LF+D +Q I P + + +L++
Sbjct: 69 LFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQAILPDVVTFSTLVEGYC 128
Query: 255 KMGKVDLAMTIFEEMNSS 272
G VD A + EEM +S
Sbjct: 129 NAGLVDDAERLLEEMVAS 146
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 53/279 (18%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ LCK G V A RL ++ K L Y+C++ + I+++ + D L
Sbjct: 51 NTLIDGLCKTGRVPEANRLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTL- 109
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ I+ D ++ + ++ + + ++
Sbjct: 110 --------------KQAILPD--------------------VVTFSTLVEGYCNAGLVDD 135
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD--------F 173
A + + + C PD+ TY ++D +VGR+ + M + G P+ F
Sbjct: 136 AERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVWSLIGGF 195
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
L + + RL+ + K D+ Y ++D TG + +L L
Sbjct: 196 CGTGDLEEARKMLERLER---------DENCKADMFAYQVMMDGLCTTGRMSAALELLEA 246
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+KQ P +Y +LI L + ++ A+ + EEM S
Sbjct: 247 IKQSGTPPRHDIYVALIRGLCQGKELGKALEVLEEMTLS 285
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
GI+P+++TY +L F ++ +L L +M+ + P I Y +LID L K G+V A
Sbjct: 7 GIEPNMVTYNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTGRVPEA 66
Query: 263 MTIFEEMNSSLSDL 276
+F +M + +L
Sbjct: 67 NRLFGDMKAKFCNL 80
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 97/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 171 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G ++ A + +EM
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEM 290
Query: 270 N 270
+
Sbjct: 291 S 291
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 15/273 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ K P+ +YN ++ D+D F++ +L S
Sbjct: 131 MHRFCKDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 189
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD +L F E +V+ P + +I K+
Sbjct: 190 --VQPDVYTYSVLINGLCKESKM-DDANEL--FDEMLVKGLVPNGVTFTT-LIDGHCKNG 243
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ I+ + PDLITYN ++ L + G +N M G+ PD +Y
Sbjct: 244 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYT 303
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
TL++ K LD + + M + I+ D + YTA+I + G ++ ++ +M
Sbjct: 304 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSV 363
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 364 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 396
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 65/138 (47%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E + F + +L +L K+R L
Sbjct: 51 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWG 110
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 171 RLGDLDEGFRLKSAMLAS 188
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 3/279 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N ++ L K +V A + + L+ F ++N ++ + +D +++I+ ++ S
Sbjct: 281 NVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKS 340
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
YT F A D + + ++ ++I I+ A K++QI +A
Sbjct: 341 GLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEA 400
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L +++ +K C PD Y+ ++ ILG+ GR+ D+ M++ GV PD ++YNTL++
Sbjct: 401 LKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISC 460
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ + L +M E KPDL TY L+ F R ++ L + M + +
Sbjct: 461 ACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIE 520
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKD 281
Y L+ L + GK+ LA + F EM LS PKD
Sbjct: 521 AGTYAILVRGLCENGKLHLACSFFGEM---LSKAMVPKD 556
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYN++++ L K + L EM L T + +I R G +E++ F ++
Sbjct: 209 SYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNI 268
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
++ I L+D L K V+ A +F E+ S+
Sbjct: 269 EKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 307
>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Brachypodium distachyon]
Length = 837
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 133/272 (48%), Gaps = 5/272 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M N I +LC + ++ +++ + +P+ YN + D + + +L+D
Sbjct: 477 MFNDLIHELCSLDRLDEGYKMFNLMKNLGL-IPSEFTYNSLFYGICRRKDPNCALDLLRD 535
Query: 59 LLVSS-RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + R +C T + ++ T+ L F++E++++ I+ + + K+
Sbjct: 536 MRTNGHRPWIKNC-TEMVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTG 594
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ AL IF I PD++ +NI+++ G++++ M E G+ P ++YN
Sbjct: 595 EVDNALGIFRDISSKYYLPDVVAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYN 654
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ K ++ + +M + P ++TYT+LID TG +E++ L++ M +
Sbjct: 655 LMIDVWCKSGNIEKAIACLNKMIDEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDK 714
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y + ++ L K +VD A+T +EEM
Sbjct: 715 GCAPNKIAYTAFVNGLCKRARVDTALTYYEEM 746
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 7/245 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C +++LC +G ++ A++ L + K FLP+ Y+ + +T ++D + I +D
Sbjct: 548 CTEMVQQLCISGRITEALQFLDEML-KMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRD- 605
Query: 60 LVSSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+SS+ D + F ++ ++ +EE+++ SI+ N +I + KS
Sbjct: 606 -ISSKYYLPDVVAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSG 664
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
IEKA+ + + + P ++TY ++D L GR ++ + + M + G P+ I+Y
Sbjct: 665 NIEKAIACLNKMIDEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDKGCAPNKIAYT 724
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+N L K R+D L Y+ EM G + D + I+ TGN + L ++ Q+
Sbjct: 725 AFVNGLCKRARVDTALTYYEEMMTKGFELDTFSCLYFINFLISTGNATKGCELLKEVLQK 784
Query: 238 QIRPS 242
I S
Sbjct: 785 DITHS 789
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 87/165 (52%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ K ++++ AL + + G+ CK L+ +N ++ L + R+++ F MK
Sbjct: 444 NIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEGYKMFNLMKN 503
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G++P +YN+L + + + + L R+M +G +P + T ++ +G I E
Sbjct: 504 LGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRITE 563
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+L+ ++M + P I Y + ++ L K G+VD A+ IF +++S
Sbjct: 564 ALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISS 608
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 119/274 (43%), Gaps = 22/274 (8%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLV----- 61
L AG AA+ + R PN+Y NC+L A+ D + L++++V
Sbjct: 148 LGAAGLPDAALLVFDGARTCLSCTPNSYTFNCLLDTLAKAGRADDAEARLQEMVVRCGDE 207
Query: 62 --SSRTLSS--DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
TL+S CY N R DD + + + + E ++ + + AF+K
Sbjct: 208 SVDKYTLTSLLQCYCNAGRP----DDANGVFERMSQRGWV--DEHVLTI--LAVAFSKWG 259
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ A+ + ++ L +P T ++++ + R++ + F M G V Y+
Sbjct: 260 KVDGAVELLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGFVAGLPMYS 319
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+ L + + + + F EM + PD ++++F R G+ + LF + +
Sbjct: 320 VLIEGLCQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDFAIA-GLFINENAR 378
Query: 238 QIRPS--IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Q++PS I ++ +++ G+ + A + M
Sbjct: 379 QLKPSGVIALFNVVLEGFVNHGQAEAAYQLLTSM 412
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
CK G++S A + + + L + AY +V + D +F + +++L
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + + ++++V + II A ++ ++ K IF
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ P ++TY +++ GR+ F+ M+E G++P+ I+YN+L+N L K+RR
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+D +F EM E GI P+ +YT LI+ GN +E+L L+ M + ++P + +
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694
Query: 249 LIDNLKKMGK 258
L LK++GK
Sbjct: 695 L---LKQLGK 701
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LC+ G + A +L + ++ I P+ Y ++ S + + ++ + ++L
Sbjct: 413 NTLLDGLCRQGELEVAQQLKVEMINEGI-APDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L S Y + D ++ EE++ P +I+ N ++ K +E
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + + PD +TY ++ GR+ F M G+ P ++Y L+
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ RL+ IYF EM E GI P+++TY +LI+ + ++++ F +M ++ I
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF 651
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y Y LI+ MG A++++++M
Sbjct: 652 PNKYSYTILINENCNMGNWQEALSLYKQM 680
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G V + LL ++ + PN YN ++ ++ + + + ++ ++L
Sbjct: 238 NTLLDSYCKGGKVQQGLDLLSEMQRRGC-APNDVTYNVLINGLSKKGEFEQAKGLIGEML 296
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +S+ Y + + L EE+V + ++ N I+ K ++
Sbjct: 297 KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMS 356
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + PD+++YN ++ R+G + F ++ + P ++YNTLL
Sbjct: 357 DAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLL 416
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L + L++ EM GI PD++TYT L++ + G++ + F++M + +
Sbjct: 417 DGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLE 476
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y + I K+G A ++ EEM
Sbjct: 477 LDSYAYATRIVGELKLGDTSRAFSLQEEM 505
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 90/173 (52%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
++S S+ +++ +I+ ++K +E+ L +FD + + PD+ N +L IL ++
Sbjct: 158 VSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSK 217
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
+ + +M E G+ P ++YNTLL++ K ++ L EM G P+ +TY LI+
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G E++ L +M + ++ S Y Y LI G + A+++ EEM
Sbjct: 278 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
M + C L +F + + SP+ + NRI+ + KA+ ++ + KP ++
Sbjct: 179 MVEQC--LSVFDKMIKSRLSPD-VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN +LD + G+V L+ + M+ G P+ ++YN L+N L K + EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
++G+K TY LI + G + E+L L +M + P++ Y S I L K+G++
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 260 DLAMTIFEEM--NSSLSDL 276
AM +M N+ L D+
Sbjct: 356 SDAMQQLSDMLANNLLPDV 374
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 73/305 (23%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I LCK G +S A++ L + N+ LP+ +YN ++
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNL-LPDVVSYNTLIYGYCRLG------------- 388
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
N +AF++ D+ + +F +I+ N ++ + ++E
Sbjct: 389 ------------NLMKAFLLFDELRSIYLF----------PTIVTYNTLLDGLCRQGELE 426
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV-------NDMLNE--------FAS-- 163
A + + PD++TY I+++ ++G + ++ML+E +A+
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486
Query: 164 ------------------MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
M G PD I YN +++ L K+ L+ ++M G+
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVI 546
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD +TYT++I + G + + +F +M + + PS+ Y LI G+++ A
Sbjct: 547 PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY 606
Query: 266 FEEMN 270
F EM
Sbjct: 607 FSEMQ 611
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSS 63
YI LCK G V A+ + L+ + A +N VL S ID +++ +++ SS
Sbjct: 198 YIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESS 257
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+AF + + + V++ N++I F K + +
Sbjct: 258 VVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVS 317
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + PD+ TY V++ L + G+ + F +K+ G PD + Y T+++ L
Sbjct: 318 DLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGL 377
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+++ L + EM + G P+ TY A+I + + GN+EE+ +++ +M +
Sbjct: 378 CRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKT 437
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I L GK+ A +FEEM+
Sbjct: 438 VSYNVMIKGLCSHGKIKEAHDLFEEMS 464
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ TYN ++ ++G + + + M + G +SYN ++ L ++
Sbjct: 400 PNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDL 459
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F EM GI + +TY AL+ F + G I E L ++ Q I+PS Y LID L +
Sbjct: 460 FEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQ 519
Query: 256 MGKVDLAMTIFEEM-NSSLSDLAGPKDF 282
G + A ++++M N + DF
Sbjct: 520 EGDMQNAKILWDDMQNRGMEPAVCTHDF 547
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 111/266 (41%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCK G R+ + L+D+ + P+ Y ++ + + ++ +++
Sbjct: 339 VNGLCKGGKGPEGFRVFKDLKDRG-YAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKG 397
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + + E+ E + N +I +I++A
Sbjct: 398 FLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAH 457
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + + ITYN ++ + G++ + N + + G+ P SY L++ L
Sbjct: 458 DLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKL 517
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ + I + +M G++P + T+ +I F + G E + M + ++RP
Sbjct: 518 CQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQK 577
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ SLI L ++ ++D A+ + + M
Sbjct: 578 KSFESLIQCLSQIDRLDDALLVLDSM 603
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 98/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +F+ I +P ++++N +++
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 171
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM + G+ P+ +
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 231
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID ++G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 232 TFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 291
Query: 270 N 270
+
Sbjct: 292 S 292
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 40/250 (16%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + DK + +PN + ++ ++ +DL+ +I K +L S
Sbjct: 202 INGLCKESKMDDANELFDEMLDKGL-VPNGVTFTTLIDGHCKSGRVDLAMEIYKQML--S 258
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 259 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAH 285
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 286 DLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 345
Query: 184 -RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
++ R LD + REM +G+KPD TYT +I+ F + G++ +L +M++ PS
Sbjct: 346 CQEGRYLDAEKV-LREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 404
Query: 243 IYVYRSLIDN 252
+ Y L++
Sbjct: 405 VVTYNVLMNG 414
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A +FD + KGL P+ +T+ ++D + GRV+ + + M
Sbjct: 201 LINGLCKESKMDDANELFDEMLDKGLV--PNGVTFTTLIDGHCKSGRVDLAMEIYKQMLS 258
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E
Sbjct: 259 QSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLET 318
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ M Q+ IR Y +LI L + G+ A + EM S+
Sbjct: 319 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSA 364
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 126/276 (45%), Gaps = 21/276 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ K P+ ++N ++ D+D F++ + S
Sbjct: 132 MHRFCKEGDIRVAQSVFNAIT-KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 190
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD +L +E++ + + +I KS
Sbjct: 191 --VQPDVYTYSVLINGLCKESKM-DDANELF---DEMLDKGLVPNGVTFTTLIDGHCKSG 244
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFI 174
+++ A+ I+ + PDLITYN ++ L + G + +D+++E SMK G+ PD I
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMK--GLKPDKI 301
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K L+ + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 302 TYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREM 361
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 362 LSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/138 (18%), Positives = 65/138 (47%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E F + +L ++ K++ L
Sbjct: 52 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWG 111
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +FN + + +RPS+ + +L++
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 171
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M++S
Sbjct: 172 RLGDLDEGFRLKSAMHAS 189
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 96/177 (54%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ + P +++ N +I K +E+A+ F + C PD+ITYN +L L + G V+
Sbjct: 260 KTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVD 319
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ L F + ++ P I+YNT+++ L + +D L + +M E GI PD +T+ +L+
Sbjct: 320 EALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLV 379
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F +E+++ + +M ++ R + YR +I+ L + +VD+A+ + E M S
Sbjct: 380 WGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISG 436
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 87/167 (52%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ +K + E A LI +I +P+ ITYN +L L G +++ A
Sbjct: 197 LVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILA 256
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
MK+ P ++YN L+N L K ++ + +F +M PD++TY L+ + + G
Sbjct: 257 IMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEG 316
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++E+L++F + P + Y ++ID L + G +D A+ ++ +M
Sbjct: 317 MVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQM 363
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F++ V + SP+ II N ++ A K +++AL +F + C P LITYN V+D L
Sbjct: 290 FVQMVSENCSPD-IITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLT 348
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R G +++ L + M E G+ PD I++ +L+ I +++ + REMG+ + +
Sbjct: 349 RRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSS 408
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +I+ R ++ ++++ M + +P +Y +LI ++ G V+ A + +++
Sbjct: 409 AYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKL 468
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNC---VLVASAETNDIDLSFQILKDL 59
N + LCK G++ A +L+ + N +PN+ C ++ I+ + ++LK +
Sbjct: 26 NEILHNLCKKGSLMEATKLIDIMSRVN-QIPNS-TCSTNLIRGLVRIGRIERASRVLKTM 83
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++S Y F + +E++ P +I N II + + +
Sbjct: 84 VMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKF 143
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A+ + C P LI Y I+++++ + L M G PD ++YN+L
Sbjct: 144 DQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSL 203
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+N K + + + + G++P+ +TY +L+ S G +E + MK+
Sbjct: 204 VNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSH 263
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P++ Y LI+ L K G V+ A+ F +M S
Sbjct: 264 PPTVVTYNILINGLCKCGLVERAINFFVQMVS 295
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
T N +L L + G + + M +P+ L+ L +I R++ + M
Sbjct: 24 TNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTM 83
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
SG+ PD++TY ++ F + + ++ L DM P + Y ++I +L GK
Sbjct: 84 VMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKF 143
Query: 260 DLAMTIF 266
D A+ +
Sbjct: 144 DQAVEFW 150
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 137/305 (44%), Gaps = 39/305 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG I LC+A V A ++L+ + +++I +PN Y +L +N L+ ++ +++
Sbjct: 92 NGIITGLCRASRVMDAYKVLEKMVEESI-VPNVFTYTILLNGLCRSNKTKLAREVFQEMK 150
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y + + + L + E + P +I I+ K+ +++
Sbjct: 151 RNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLD 210
Query: 121 KALLIFDHIKGLKCKPDLITY-NIV----------------------------------- 144
AL + ++ + +P+ +TY N+V
Sbjct: 211 DALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGY 270
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
LD L + G ++ ++++GVVPD ++Y+ L+N + + D L +M +G+
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
KPD++TY+ LI+ + +++ RL M+ P++ Y S++D L K GK+D
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 265 IFEEM 269
++E M
Sbjct: 391 VYEMM 395
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 136/272 (50%), Gaps = 8/272 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASA--ETNDIDLSFQILKDLLVS 62
I+ L +AG + A+R++ + +++ LP + C + + + +D + + ++++
Sbjct: 165 IQHLSRAGEIDEALRVM--IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQM 222
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEE--VVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y+N F + +++ F EE + S E+ + A K+ ++
Sbjct: 223 GVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG-YLDALCKAGYLD 281
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + ++ PD++TY+++++ R G+ + L M+ GV PD ++Y+TL+
Sbjct: 282 RARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLI 341
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K R+ M +G P+++TY +++D ++G ++E R++ M + +
Sbjct: 342 NVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCS 401
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P + Y +++ L K G +D A+ +FE + SS
Sbjct: 402 PDVVTYSIIMNGLSKAGMLDSAVKLFELIKSS 433
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 136/276 (49%), Gaps = 4/276 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL 59
C + LCKA + A++ ++ +R + PN Y+ ++ + ++D + ++
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGV-RPNEVTYSNLVHGFRQHGELDRVIRFFEEE 254
Query: 60 LV-SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L + Y + A + +EE+ Q ++ + +I FA++ Q
Sbjct: 255 KARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQ 314
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +L + + ++ KPD++TY+ ++++L + + D M+ AG P+ ++YN+
Sbjct: 315 FDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNS 374
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K ++D + M +S PD++TY+ +++ + G ++ +++LF +K +
Sbjct: 375 VMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSR 434
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
P Y +I +L + GK++ A ++ M +++
Sbjct: 435 EGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVA 470
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E++V+ + ++ ++ +S + + A +F +K CKP+ ITY ++ L R
Sbjct: 111 LEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSR 170
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G +++ L + + D I+ T++ L K RLD L + EM + G++P+ +T
Sbjct: 171 AGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVT 230
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRP-SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y+ L+ F + G ++ +R F + K ++ Y +D L K G +D A EE+
Sbjct: 231 YSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEEL 290
Query: 270 NSS 272
S
Sbjct: 291 RQS 293
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
Q L + E+ + +P ++ + N II ++ ++ A + + + P++ TY I+L
Sbjct: 72 QALELVRELSGVYTP-TLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILL 130
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ L R + F MK G P+ I+Y TL+ +L + +D L E +
Sbjct: 131 NGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELP 190
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
D++T T ++ + ++++L+ +M+Q +RP+ Y +L+ ++ G++D +
Sbjct: 191 TDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRF 250
Query: 266 FEE 268
FEE
Sbjct: 251 FEE 253
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P L YN ++ L R RV D M E +VP+ +Y LLN L + + L
Sbjct: 86 PTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREV 145
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F+EM +G KP+ +TY LI R G I+E+LR+ + + ++ + +++ L K
Sbjct: 146 FQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK 205
Query: 256 MGKVDLAMTIFEEM 269
++D A+ EEM
Sbjct: 206 ASRLDDALKFMEEM 219
>gi|302781494|ref|XP_002972521.1| hypothetical protein SELMODRAFT_52385 [Selaginella moellendorffii]
gi|300159988|gb|EFJ26607.1| hypothetical protein SELMODRAFT_52385 [Selaginella moellendorffii]
Length = 450
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 17/275 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+E LC+ G VS A +LL+ +++K+ F P+A + VL E +D + + +++
Sbjct: 152 LEILCRCGRVSDAWKLLRMMKEKH-FKPDAVPHTYVLRKFCEAGRLDEALKGFEEM---- 206
Query: 64 RTLSSDCYTNFARAFIMTDD-CTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSR 117
T + C +F ++ D C+ + F+E++V + ++ + +K R
Sbjct: 207 -TGNEKCEPDFVTYSVIMDGLCSAQRLDDAWKFMEKMVAKGRMPDVRTFRSLVESHSKPR 265
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+E + D G + KP Y ++L L R GR + + + + P F++Y
Sbjct: 266 LVEDRGKLED---GKRAKPTATMYTLLLYGLLRKGRAGEAMELYQQVLSGSTRPSFLTYW 322
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ L K R F +M + P +TY ALI R G +E +L LF +M Q+
Sbjct: 323 VIIDGLGKAGRGLEADEVFSDMIRGDVSPQTVTYNALISGLCRIGCVERALELFREMPQR 382
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ RP Y +L+D + K + D A+T+ E + S
Sbjct: 383 ECRPDSASYGALLDGICKAERADDAVTLLREASES 417
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N +E L + G A + + R +F PNA Y ++ + ID + ++ ++
Sbjct: 10 NQLLETLVRCGRSMDAYGIFK--RFSRMFKPNAFTYTVLVRGLCDAGRIDEACEVFNEMQ 67
Query: 61 ----VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
+ ++T N DD ++E Q P+S + +I+ ++
Sbjct: 68 GRGGIEAKTAIYSVLLNGLLRSGKLDDAFSYYQMMQETCQ---PDSS-TYSTMIYELSRQ 123
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+++ A + + PD+ + L+IL R GRV+D MKE PD + +
Sbjct: 124 GRLDHATKVAQEMVDKDKIPDMPCLGVALEILCRCGRVSDAWKLLRMMKEKHFKPDAVPH 183
Query: 177 NTLLNNLRKIRRLDLCLIYFREM-GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+L + RLD L F EM G +PD +TY+ ++D ++++ + M
Sbjct: 184 TYVLRKFCEAGRLDEALKGFEEMTGNEKCEPDFVTYSVIMDGLCSAQRLDDAWKFMEKMV 243
Query: 236 QQQIRPSIYVYRSLIDNLKK 255
+ P + +RSL+++ K
Sbjct: 244 AKGRMPDVRTFRSLVESHSK 263
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKC-KPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
++ + +I++A +F+ ++G + Y+++L+ L R G+++D + + M+E
Sbjct: 46 LVRGLCDAGRIDEACEVFNEMQGRGGIEAKTAIYSVLLNGLLRSGKLDDAFSYYQMMQET 105
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
PD +Y+T++ L + RLD +EM + PD+ ++ R G + ++
Sbjct: 106 -CQPDSSTYSTMIYELSRQGRLDHATKVAQEMVDKDKIPDMPCLGVALEILCRCGRVSDA 164
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+L MK++ +P + ++ + G++D A+ FEEM +
Sbjct: 165 WKLLRMMKEKHFKPDAVPHTYVLRKFCEAGRLDEALKGFEEMTGN 209
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C+PD TY+ ++ L R GR++ M + +PD L L + R+
Sbjct: 106 CQPDSSTYSTMIYELSRQGRLDHATKVAQEMVDKDKIPDMPCLGVALEILCRCGRVSDAW 165
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK-QQQIRPSIYVYRSLIDN 252
R M E KPD + +T ++ F G ++E+L+ F +M ++ P Y ++D
Sbjct: 166 KLLRMMKEKHFKPDAVPHTYVLRKFCEAGRLDEALKGFEEMTGNEKCEPDFVTYSVIMDG 225
Query: 253 LKKMGKVDLAMTIFEEM 269
L ++D A E+M
Sbjct: 226 LCSAQRLDDAWKFMEKM 242
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 229
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 289
Query: 270 N 270
+
Sbjct: 290 S 290
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ K P+ +YN ++ D+D F++ +L S
Sbjct: 130 MHRFCKDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 188
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD +L F E +V+ P + +I K+
Sbjct: 189 --VQPDVYTYSVLINGLCKESKM-DDANEL--FDEMLVKGLVPNGVTFTT-LIDGHCKNG 242
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFI 174
+++ A+ I+ + PDLITYN ++ L + G + + +++E SMKE + PD I
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM-SMKE--LKPDKI 299
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 300 TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREM 359
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 360 LNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQ 395
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 38/249 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + K + +PN + ++ + +DL+ +I K +L S
Sbjct: 200 INGLCKESKMDDANELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 256
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 257 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAH 283
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + + KPD ITY ++D + G ++ M + + D ++Y L++ L
Sbjct: 284 HLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 343
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KPD TYT +I+ F + G++ + +L +M++ PS+
Sbjct: 344 CQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 403
Query: 244 YVYRSLIDN 252
Y L++
Sbjct: 404 VTYNVLMNG 412
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 64/138 (46%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ DL ++ ++ G + D + + +E F + +L +L K++ L
Sbjct: 50 RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 109
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 170 RLGDLDEGFRLKSAMLAS 187
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
CK G++S A + + + L + AY +V + D +F + +++L
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + + ++++V + II A ++ ++ K IF
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ P ++TY +++ GR+ F+ M+E G++P+ I+YN+L+N L K+RR
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+D +F EM E GI P+ +YT LI+ GN +E+L L+ M + ++P + +
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694
Query: 249 LIDNLKKMGK 258
L LK++GK
Sbjct: 695 L---LKQLGK 701
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G V + LL ++ + PN YN ++ ++ + + + ++ ++L
Sbjct: 238 NTLLDSYCKGGKVQQGLDLLSEMQRRGC-APNDVTYNVLINGLSKKGEFEQAKGLIGEML 296
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +S+ Y + + L EE+V + ++ N I+ K ++
Sbjct: 297 KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMS 356
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ + PD+++YN ++ R+G + F ++ + P ++YNTLL
Sbjct: 357 DAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLL 416
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L + L++ EM GI PD++TYT L++ + G++ + F++M + +
Sbjct: 417 DGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLE 476
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y + I K+G A ++ EEM
Sbjct: 477 LDSYAYATRIVGELKLGDTSRAFSLQEEM 505
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 90/173 (52%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
++S S+ +++ +I+ ++K +E+ L +FD + + PD+ N +L IL ++
Sbjct: 158 VSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSK 217
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
+ + +M E G+ P ++YNTLL++ K ++ L EM G P+ +TY LI+
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ G E++ L +M + ++ S Y Y LI G + A+++ EEM
Sbjct: 278 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
M + C L +F + + SP+ + NRI+ + KA+ ++ + KP ++
Sbjct: 179 MVEQC--LSVFDKMIKSRLSPD-VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
TYN +LD + G+V L+ + M+ G P+ ++YN L+N L K + EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
++G+K TY LI + G + E+L L +M + P++ Y S I L K+G++
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 260 DLAMTIFEEM--NSSLSDL 276
AM +M N+ L D+
Sbjct: 356 SDAMQQLSDMLANNLLPDV 374
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK GN+ A LLQ + + +P+ Y ++ A E + +I ++L
Sbjct: 518 NVVVDGLCKLGNLEEASELLQKMVSDGV-IPDYVTYTSIIHAHLENGRLRKGREIFYEML 576
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T S++ +I A ++E
Sbjct: 577 SKGLT-----------------------------------PSVVTYTVLIHGHAGKGRLE 601
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + F ++ P++ITYN +++ L +V R++ N FA M E G+ P+ SY L+
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
N + L +++M + G++PD T++AL+ G+
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 73/305 (23%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N +I LCK G +S A++ L + N+ LP+ +YN ++
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNL-LPDVVSYNTLIYGYCRLG------------- 388
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
N +AF++ D+ + +F +I+ N ++ + ++E
Sbjct: 389 ------------NLMKAFLLFDELRSIYLF----------PTIVTYNTLLDGLCRQGELE 426
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV-------NDMLNE--------FAS-- 163
A + + PD++TY I+++ ++G + ++ML+E +A+
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486
Query: 164 ------------------MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
M G PD I YN +++ L K+ L+ ++M G+
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVI 546
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD +TYT++I + G + + +F +M + + PS+ Y LI G+++ A
Sbjct: 547 PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY 606
Query: 266 FEEMN 270
F EM
Sbjct: 607 FSEMQ 611
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 79/170 (46%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I+ N ++ ++ K ++++ L + ++ C P+ +TYN++++ L + G
Sbjct: 233 TIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLI 292
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G+ +YN L+ L L EM G P + TY + I +
Sbjct: 293 GEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL 352
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G + ++++ +DM + P + Y +LI ++G + A +F+E+ S
Sbjct: 353 GRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 133/271 (49%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ +LCK+GN + A+ L + + ++NI Y+ V+ + + D + + ++ +
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 65 TLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
Y++ DD ++L E++ ++ + +I F K ++ +
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKML---REMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +++ + PD ITYN ++D + +++ F M G PD ++Y+ L+N
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ K +R+D + FRE+ G+ P+ +TY L+ F ++G + + LF +M + + P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
S+ Y L+D L G+++ A+ IFE+M S
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 137/275 (49%), Gaps = 13/275 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LCK G+ A+ L + K I Y+ ++ D ++L++++ R
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GR 309
Query: 65 TLSSDCYTNFARAFIMTDDCTQLL----IFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ D T A + + +LL ++ E + + +P++I N +I F K +
Sbjct: 310 NIIPDVVTFSALIDVFVKE-GKLLEAKELYNEMITRGIAPDTI-TYNSLIDGFCKENCLH 367
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A +FD + C+PD++TY+I+++ + RV+D + F + G++P+ I+YNTL+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +L+ F+EM G+ P ++TY L+D G + ++L +F M++ ++
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
I +Y +I + KVD A ++F SLSD
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLF----CSLSD 518
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 11/261 (4%)
Query: 15 VSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTN 73
V+ A+ L +S+ + + + P +N + A A T DL K + ++ + D YT
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG--IEHDMYT- 107
Query: 74 FARAFIMTDDC-TQLLIFIEEVV----QIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
++ C + L+F V+ ++ I + ++ F ++ +A+ + D
Sbjct: 108 --MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ +K +PDL+T + +++ L GRV++ L M E G PD ++Y +LN L K
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L L FR+M E IK ++ Y+ +IDS + G+ +++L LFN+M+ + I+ + Y S
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
LI L GK D + EM
Sbjct: 286 LIGGLCNDGKWDDGAKMLREM 306
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ L+ I+ +V+ + ++ KS AL +F ++ K ++ Y+IV
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+D L + G +D L+ F M+ G+ D ++Y++L+ L + D REM I
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD++T++ALID F + G + E+ L+N+M + I P Y SLID K + A
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 265 IFEEMNS 271
+F+ M S
Sbjct: 372 MFDLMVS 378
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 98/199 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
++ F + ++ + ++ +V++ ++ V+ +I ++ +AL++ D +
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+PD +TY VL+ L + G L+ F M+E + + Y+ ++++L K D
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L F EM GIK D++TY++LI G ++ ++ +M + I P + + +LI
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 251 DNLKKMGKVDLAMTIFEEM 269
D K GK+ A ++ EM
Sbjct: 323 DVFVKEGKLLEAKELYNEM 341
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I N ++ F +S ++ A +F + P ++TY I+LD L G +N L F
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+++ + YN +++ + ++D F + + G+KPD++TY +I + G+
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ E+ LF MK+ P + Y LI
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 103/235 (43%), Gaps = 3/235 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK + A ++ + K P+ Y+ ++ + + +D ++ +++
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y F + +E+V P S++ ++ + ++
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL IF+ ++ + + YNI++ + +V+D + F S+ + GV PD ++YN ++
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
L K L + FR+M E G PD TY LI + + S+ L +MK
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ + +I ++ K+++++ + +F I P+ ITYN ++ + G++N F
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M GV P ++Y LL+ L L+ L F +M +S + + Y +I
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
++++ LF + + ++P + Y +I L K G + A +F +M D P DF
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK---EDGCTPDDF 561
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 40/204 (19%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ +I +NR F + + +LL + I K N ++DI +VND ++
Sbjct: 3 QRLIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDI-----KVNDAIDL 57
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK--------------- 205
F SM ++ +P I +N L + + + ++ DL L + + M +GI+
Sbjct: 58 FESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCR 117
Query: 206 --------------------PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
PD +T++ L++ F G + E++ L + M + + RP +
Sbjct: 118 KKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVT 177
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+LI+ L G+V A+ + + M
Sbjct: 178 VSTLINGLCLKGRVSEALVLIDRM 201
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 141/305 (46%), Gaps = 38/305 (12%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
YI LC+ + A ++ + ++ + +PN Y+ ++ +T ++ ++ + K++LV+
Sbjct: 274 YIRDLCRENKMEEAEKMFELMKIHGV-VPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVA 332
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ + F + +V+ ++ V N +I KS + +A
Sbjct: 333 ELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEA 392
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRV----------------------NDMLNE 160
+ + ++ L PD+ TY I+++ L R+ N +++
Sbjct: 393 MGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHG 452
Query: 161 F-------------ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
F + M +GV P+ I+++TL++ K+R + + + EM GI PD
Sbjct: 453 FCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPD 512
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++TYT LID+ + N++E+LRL++DM + I P+ + + L+D K G++ A+ +
Sbjct: 513 VVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYL 572
Query: 268 EMNSS 272
E N +
Sbjct: 573 ENNQA 577
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 133/284 (46%), Gaps = 25/284 (8%)
Query: 6 IEKLCKAGNVSAA----VRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
++ CKA + AA V +++ D N+++ YNC++ ++ ++ + +L ++
Sbjct: 345 VDGFCKARELVAARSLFVHMVKFGVDPNLYV---YNCLIHGQCKSGNMLEAMGLLSEM-- 399
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQ-LLIFIEEVVQIASPESI----IVVNRIIFAFAKS 116
S LS D +T ++ CT+ L + Q E I + N +I F K
Sbjct: 400 ESLNLSPDVFT---YTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKE 456
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
IEKAL + + +P++IT++ ++D +V + + + M G+VPD ++Y
Sbjct: 457 YNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTY 516
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TL++ K + L + +M E+GI P+ T+ L+D F + G + +++ + + Q
Sbjct: 517 TTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQ 576
Query: 237 QQIRPSI-------YV-YRSLIDNLKKMGKVDLAMTIFEEMNSS 272
SI YV + LI+ L + G + A F +M S
Sbjct: 577 AATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSG 620
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 88/179 (49%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++E+ + ++ + I + ++E+A +F+ +K P+L TY+ ++D +
Sbjct: 256 LDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCK 315
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + + + A ++P+ + + TL++ K R L F M + G+ P+L
Sbjct: 316 TGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYV 375
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI ++GN+ E++ L ++M+ + P ++ Y LI+ L ++ A +F+ M
Sbjct: 376 YNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRM 434
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 18/181 (9%)
Query: 97 IASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
I SP+ SI V + +I F + E AL + + ++C PD +L+ L R R +
Sbjct: 159 IQSPKFSIGVFSLLIMEFLEMGLFEDALWV---SREMRCSPDSKACLAILNGLVRRRRFD 215
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNL-------RKIRRLDLCLIYFREMGESGIKPDL 208
+ ++ M G+VPD Y+ L +K + LD EM G+KP++
Sbjct: 216 SVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLD-------EMTSLGVKPNV 268
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
YT I R +EE+ ++F MK + P++Y Y ++ID K G + A +++E
Sbjct: 269 YIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKE 328
Query: 269 M 269
+
Sbjct: 329 I 329
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ D + L KP++ Y I + L R ++ + F MK GVVP+ +Y+ +++
Sbjct: 255 LLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYC 314
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
K L ++E+ + + P+++ + L+D F + + + LF M + + P++Y
Sbjct: 315 KTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLY 374
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
VY LI K G + AM + EM S
Sbjct: 375 VYNCLIHGQCKSGNMLEAMGLLSEMES 401
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 136 PDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
PD+ Y+++ + G + +L+E S+ GV P+ Y + +L + +++
Sbjct: 231 PDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSL---GVKPNVYIYTIYIRDLCRENKMEEA 287
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
F M G+ P+L TY+A+ID + +TGN+ ++ L+ ++ ++ P++ V+ +L+D
Sbjct: 288 EKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDG 347
Query: 253 LKKMGKVDLAMTIFEEM 269
K ++ A ++F M
Sbjct: 348 FCKARELVAARSLFVHM 364
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 117/238 (49%), Gaps = 4/238 (1%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+A Y+ ++ A + ++ D+L ++ S Y N A + + + L
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++ ++ N ++ A+ RQ KAL F+ +KG K +PD T+NI++ L +
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 151 VGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+G+ + L+ F SM+E A PD +++ ++++ ++ C F M G+KP++
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
++Y AL+ ++ G +L + D+KQ I P + Y L+++ + + A +F
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ I+ ++ +IE +F+ + KP++++YN ++ G L+
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K+ G++PD +SY LLN+ + R+ F M + KP+++TY ALID++G G
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 223 NIEESLRLFNDMKQQQIRPSI 243
+ E++ +F M+Q I+P++
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNV 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I A+ +++A +F ++ CKPD TY+ +++ GR G+ +N M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 165 KEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
A + P +YN L+N N R+ L++C ++M ++G+ PDL+T+ ++ ++
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREA--LEVC----KKMTDNGVGPDLVTHNIVLSAY 126
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++L F MK ++RP + +I L K+G+ A+ +F M
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 123/299 (41%), Gaps = 38/299 (12%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFL-PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
L K G S A+ L S+R+K P+ + ++ + +I+ + + ++
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y A+ + L + ++ Q ++ ++ ++ +SRQ KA +
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS---------- 175
F ++ + KP+++TYN ++D G G + + + F M++ G+ P+ +S
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 176 -------------------------YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
YN+ + + L+ + ++ M + +K D +T
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+T LI R E++ +M+ I + VY S++ K G+V A +IF +M
Sbjct: 401 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI----------------------- 143
N I ++ + ++EKA+ ++ ++ K K D +T+ I
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 144 ------------VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
VL + G+V + + F MK AG PD I+Y ++L+ +
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
F EM +GI+PD + +AL+ +F + G L + M++++I + V+ +
Sbjct: 487 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 546
Query: 252 NLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ + A+ + + M+ L L+
Sbjct: 547 ACNTLQEWKRAIDLIQMMDPYLPSLS 572
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 89/219 (40%), Gaps = 37/219 (16%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+++E+ ++ P + V + ++ A++K Q+ +A IF+ +K C+PD+I Y +L
Sbjct: 420 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 479
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK---- 205
+ F M+ G+ PD I+ + L+ K + + M E I
Sbjct: 480 ASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGA 539
Query: 206 -----------------------------PDL---LTYTALIDSFGRTGNIEESLRLFND 233
P L LT ++ FG++G +E ++LF
Sbjct: 540 VFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT-NQMLHLFGKSGKVEAMMKLFYK 598
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + ++ Y L+++L +G + + E M+ +
Sbjct: 599 IIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGA 637
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 53/285 (18%), Positives = 112/285 (39%), Gaps = 36/285 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVA-SAETNDIDLSFQILKDLLV 61
N I A + A+ L QS+R K + + +L++ S + + LK++
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S L+ + Y++ A+ T+ ++ +I ++ A+ S + K
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN------DMLNE-------------FA 162
A +F ++ +PD I + ++ + G+ + D++ E F+
Sbjct: 487 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 546
Query: 163 ---SMKEAGVVPDFISY-------------NTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+++E D I N +L+ K +++ + F ++ SG+
Sbjct: 547 ACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGI 606
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+L TY L++ GN + + + M I+PS +YR +I
Sbjct: 607 NLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 99/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ +M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 23/268 (8%)
Query: 17 AAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+RL QS+ D K P+ ++N ++ + D+D F+ LK+ + +S + D Y
Sbjct: 150 GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFR-LKNAMQAS-GVQPDVY 207
Query: 72 T------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
T + M DD +L +E++ + + +I K+ +++ A+ I
Sbjct: 208 TYSVLINGLCKESKM-DDANELF---DEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + PDLITYN ++ L + G + D+++E SMK G+ PD I+Y TL++
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMK--GLKPDKITYTTLIDG 320
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K L+ Y + M + I+ D + YTALI + G ++ ++ +M ++P
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I Y +I+ K G V + +EM
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + D N +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KP++ TYT +I+ F + G++ +L +M++ PS+
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSV 416
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + ++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL N M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 232
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G +D + M +S
Sbjct: 183 KLGDLDEGFRLKNAMQAS 200
>gi|449497581|ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Cucumis sativus]
Length = 681
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I L K G A +LL + + + Y +L + D + ++L+ ++
Sbjct: 345 NSIIHGLSKEGGCMRAYQLLVEGVEFGYSPSEHTYKVLLEGLCKELDTQKAKEVLQIMIH 404
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + RA +T++ T+LL + E++Q +I +N +I F K IE+
Sbjct: 405 KQGVDRTRIYNIYLRAVCLTNNSTELLNTLVEMLQTNCQPDVITLNTVIKGFCKVGSIEE 464
Query: 122 ALLIF-DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN-EFASMKEAGVVPDFISYNTL 179
AL + D I G C PD +T+ ++ L VGR+ + L+ + M E G+VP I+YN
Sbjct: 465 ALKVLNDMIGGKFCTPDHVTFTTIIFGLLNVGRIRESLDILYKVMPEKGIVPGVITYNAT 524
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L K+++ + + F M +GI+ D TY +ID IEE R + D+
Sbjct: 525 IRGLFKLQQANQAMNTFDRMVRNGIQADSTTYAVVIDGLCDCNQIEEVKRFWKDIVWPSK 584
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+VY +++ L K + A E++ S
Sbjct: 585 IHDSFVYSAILKGLCHSSKFNEACHFLYELSDS 617
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 8/176 (4%)
Query: 98 ASPE---SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
A PE SI+ NR+I F A + +K P++++Y ++D RV V
Sbjct: 153 AKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYCRVCNV 212
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD-----LCLIYFREMGESGIKPDLL 209
+ F M V P+ ++Y+ L+N R + +C ++ R GE +
Sbjct: 213 SAAEKLFDEMPGNYVEPNSLTYSVLINGFLYKRDFETGKALICNLWERMKGELDSSVNNA 272
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
+ L+DS G+ E + DM Q Q P + Y +ID+L K + A I
Sbjct: 273 AFAHLVDSLCLVGSFHEVFTIAEDMPQGQSVPEEFAYGQMIDSLCKAKRYHGASRI 328
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK--- 165
+I + + +A F +C PD T N++ + R+ D + + +++
Sbjct: 95 VIHGLCDAHRFHEAHCRFMLSIASRCVPDERTCNVL------IARLLDYRSPYCTLRLLV 148
Query: 166 -----EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ VP ++YN L++ ++ +M G P++++YTALID + R
Sbjct: 149 CLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYCR 208
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK-----KMGKVDLAMTIFEEMNSSL 273
N+ + +LF++M + P+ Y LI+ + GK L ++E M L
Sbjct: 209 VCNVSAAEKLFDEMPGNYVEPNSLTYSVLINGFLYKRDFETGKA-LICNLWERMKGEL 265
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P ++ YN ++D N MK G P+ +SY L++ ++ +
Sbjct: 159 PSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYCRVCNVSAAEKL 218
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ---QIRPSI--YVYRSLI 250
F EM + ++P+ LTY+ LI+ F + E L ++ ++ ++ S+ + L+
Sbjct: 219 FDEMPGNYVEPNSLTYSVLINGFLYKRDFETGKALICNLWERMKGELDSSVNNAAFAHLV 278
Query: 251 DNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
D+L +G TI E+M S P++F
Sbjct: 279 DSLCLVGSFHEVFTIAEDMPQGQSV---PEEF 307
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 248
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 270 N 270
+
Sbjct: 309 S 309
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 19/275 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ + CK G++ R+ QS+ D K P+ +YN ++ D+D F++ +L
Sbjct: 149 MHRFCKDGDI----RIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 61 VSSRTLSSDCYT-----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
S + D YT N DD +L F E +V+ P S+ +I K
Sbjct: 205 ASG--VQPDVYTYSVLINGLCKESKIDDANEL--FDEMLVKGLVPNSVTFTT-LIDGHCK 259
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ +++ A+ I+ + PDLITYN ++ L + G + + M G+ PD I+
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 319
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y TL++ K LD + + M + + D + YTALI R G ++ ++ +M
Sbjct: 320 YTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREML 379
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 64/138 (46%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ DL ++ ++ G + D + + +E F + +L +L K++ L
Sbjct: 69 RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 189 RLGDLDEGFRLKSAMLAS 206
>gi|224576651|gb|ACN56999.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ + +F+++ KP++ Y +++D + G V D + M + G PD ++Y+
Sbjct: 2 KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N L K R++ L YF+ +G + + Y++LID G+ G I+E+ RLF +M ++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y +LID L K GKVD AMT+F+ M
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 153
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 99/179 (55%), Gaps = 1/179 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 11 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 70
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 71 GRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 130
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ALID+ + G ++E++ LF M++++ ++Y Y LI + K + + A+ +++ M
Sbjct: 131 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMM 189
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 92/246 (37%), Gaps = 72/246 (29%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K+G+V A+RLL + D+ F P+ Y+ V+ + ++ + + +
Sbjct: 29 IDGYAKSGSVEDAIRLLHRMIDEG-FKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNG 87
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++S Y++ +I K+ +I++A
Sbjct: 88 FAINSMFYSS-----------------------------------LIDGLGKAGRIDEAE 112
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + C D YN ++D L + G+V++ + F M+E
Sbjct: 113 RLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE----------------- 155
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
E G + TYT LI + EE+L+L++ M + I P+
Sbjct: 156 -----------------EEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGITPTA 198
Query: 244 YVYRSL 249
+R+L
Sbjct: 199 ACFRAL 204
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 99/181 (54%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +V + ++ N +I + + R + A IF+ +K +PD ITYN +++ L ++
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
V + M+++GV P ++NTL++ +L+ C +M + GIK D++++
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ +F + G I E++ + +DM + + P+ VY S+ID + G + A+ + E+M +
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKN 537
Query: 272 S 272
S
Sbjct: 538 S 538
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 7/253 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK V+ A L+ + +K+ P+ +N ++ A ++ F +L D+
Sbjct: 408 NALINGLCKLEMVTKAEDLVMEM-EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM- 465
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + SD + + +AF + + +++++ + V N II A+ +S
Sbjct: 466 -QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
E+ALL+ + +K ++TYN++L L R ++++ +++ G+ PD +SYNT
Sbjct: 525 TEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ D L +EM + GI+P L T L+ + G + + L+ M +
Sbjct: 585 IISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKN 644
Query: 239 IRPSIYVYRSLID 251
+ PS +Y ++D
Sbjct: 645 VEPSSSIYGIMVD 657
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 131/309 (42%), Gaps = 44/309 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSL-RDKNIFLPNA--YNCVLVA---SAETNDIDLSFQIL 56
N ++ AG++ A+ +L+ + R + P+A YN V+ S + +D F +
Sbjct: 161 NKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEM 220
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
D+ V+ ++ Y + D ++++ +++ N ++ ++
Sbjct: 221 VDMGVAPNRIT---YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRT 277
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA-SMKEA-------- 167
++++ + D + PD TY+I+ D L R G ML+ FA S+K+
Sbjct: 278 GRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTC 337
Query: 168 --------------------------GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
G+VP + YNTL+N ++R L F +M
Sbjct: 338 SILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
I+PD +TY ALI+ + + ++ L +M++ + PS+ + +LID G+++
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 457
Query: 262 AMTIFEEMN 270
T+ +M
Sbjct: 458 CFTVLSDMQ 466
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
C+ + LCK G V+ A ++ + L + +P YN ++ + D+ +F I + +
Sbjct: 337 CSILLNGLCKDGKVAKAKQVFEMLVHTGL-VPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395
Query: 60 LVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
SR + D Y + T+ + E+ + S+ N +I A+ +
Sbjct: 396 --KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
Q+EK + ++ K D+I++ V+ + G++ + + M V P+ YN
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++++ + + L+ +M SG+ ++TY L+ R+ I+E+ L ++ Q
Sbjct: 514 SIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RP + Y ++I G D A+ + +EMN
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 119/268 (44%), Gaps = 5/268 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
NGY C+ ++ A + + ++ ++I + YN ++ + + + ++ ++
Sbjct: 377 NGY----CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 432
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S S + + A+ + + ++ Q +I ++ AF K+ +I +
Sbjct: 433 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ I D + P+ YN ++D G L MK +GV ++YN LL
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLK 552
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + ++D + G++PD+++Y +I + G+ +++L L +M + IRP
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ +L+ L G+V ++++M
Sbjct: 613 TLRTCHTLVSALASAGRVHDMECLYQQM 640
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P L + N++L+ L VGR D+ F + AG PD ++N ++ LD+ L
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 196 FREMG--ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
R MG E PD +Y +I R+G ++L++F++M + P+ Y ++ID
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239
Query: 254 KKMGKVDLAMTIFEEMNSSLSDLAGPK 280
K G ++ + ++M L D GPK
Sbjct: 240 VKGGDLEAGFRLRDQM---LHD--GPK 261
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ AG + +L ++ K I ++ V+ A + I + IL D++
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 502
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ Y + A+I + D Q L+ +E++ SI+ N ++ +S QI++
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + ++ +PD+++YN ++ G + L M + G+ P + +TL++
Sbjct: 563 AEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVS 622
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L R+ +++M ++P Y ++D++ R N + L +M ++ I
Sbjct: 623 ALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGV 248
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 308
Query: 270 N 270
+
Sbjct: 309 S 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 42/270 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ + P+ +YN ++ D+D F++ +L S
Sbjct: 149 MHRFCKDGDIRVAQSVFDAITKWGL-RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ D YT + +I K +++ A
Sbjct: 208 --VQPDVYT---------------------------------YSVLINGLCKESKMDGAN 232
Query: 124 LIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+FD +KGL P+ +T+ ++D + GRV+ + + M ++PD I+YNTL+
Sbjct: 233 GLFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K L EM G+KPD TYT LID + G+++ + M Q+ IR
Sbjct: 291 GLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LI L + G+ A + EM S
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 65/138 (47%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E + F + +L +L K++ L
Sbjct: 69 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 189 RLGDLDEGFRLKSAMLAS 206
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 99/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ +M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 23/268 (8%)
Query: 17 AAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+RL QS+ D K P+ ++N ++ + D+D F+ LK+ + +S + D Y
Sbjct: 150 GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFR-LKNAMQAS-GVQPDVY 207
Query: 72 T------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
T + M DD +L +E++ + + +I K+ +++ A+ I
Sbjct: 208 TYSVLINGLCKESKM-DDANELF---DEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + PDLITYN ++ L + G + D+++E SMK G+ PD I+Y TL++
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMK--GLKPDKITYTTLIDG 320
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K L+ Y ++M + I+ D + YTALI + G ++ ++ +M ++P
Sbjct: 321 NCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I Y +I+ K G V + +EM
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + D N +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KP++ TYT +I+ F + G++ +L +M++ PS+
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + ++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL N M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 232
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G +D + M +S
Sbjct: 183 KLGDLDEGFRLKNAMQAS 200
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 79/139 (56%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C PD++ Y+ V+D + G VN + F M + G+ PDF++Y+++++ L K R +D
Sbjct: 212 GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ R+M G+ P+ TY LI + TG +E++R+F +M++ I P + L+
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+L K GK+ A +F+ M
Sbjct: 332 GSLCKYGKIKEARDVFDTM 350
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K G+V+ A L + + + I P+ Y+ V+ A + +D + L+ ++
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGI-PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y N + T + + +E+ + + ++ ++ ++ + K +I++A
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD + P++ +Y I+L+ G + DM + F M G+ PD ++N L+
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 404
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
LD +I F EM + G+KPD++TY +I + R G +++++ FN M Q + P
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEE-MNSSL 273
Y Y LI G + A + E MN+ +
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 70/240 (29%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I N +I A+A ++KA++IF+ ++ KPD++TY V+ L R+G+++D + +F
Sbjct: 394 IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 453
Query: 163 SMKEAGVVP-----------------------------------DFISYNTLLNNLRKIR 187
M + GV P D + +++++NNL K+
Sbjct: 454 QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 513
Query: 188 RL-------DL--------------------CLI--------YFREMGESGIKPDLLTYT 212
R+ DL CL+ F M +GI+P+ + Y
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L++ + + G I+E L LF +M Q+ I+PS +Y +ID L + G+ A F EM S
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y+ F D + +E+VQ P + + ++ A K+R ++KA +
Sbjct: 222 YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
P+ TYN ++ G+ + + F M+ ++PD ++ + L+ +L K ++
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M G P++ +YT +++ + G + + LF+ M I P IY + LI
Sbjct: 342 EARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 401
Query: 251 DNLKKMGKVDLAMTIFEEM 269
G +D AM IF EM
Sbjct: 402 KAYANCGMLDKAMIIFNEM 420
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 128/271 (47%), Gaps = 17/271 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LCKA + A L+ + +K + LPN YN ++ + T + ++ K++
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGV-LPNNWTYNNLIYGYSSTGQWKEAVRVFKEM--RR 317
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA--KSRQIEK 121
++ D T + +M C I +E + ++ N +F++ + K
Sbjct: 318 HSILPDVVT---LSMLMGSLCKYGKI--KEARDVFDTMAMKGQNPNVFSYTIMLNGYATK 372
Query: 122 ALLI-----FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
L+ FD + G PD+ T+N+++ G ++ + F M++ GV PD ++Y
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
T++ L +I ++D + F +M + G+ PD Y LI F G++ ++ L +++
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ I + S+I+NL K+G+V A IF+
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 523
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 84/169 (49%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+V ++ + K +I++ L +F + KP I YNI++D L GR +F
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 629
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E+G+ + +YN +L L K R D + F+E+ +K +++T +I +T
Sbjct: 630 MTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRR 689
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+EE+ LF + + + P + Y +I NL K G V+ A +F M ++
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 15/237 (6%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCV---LVASAETNDIDLSFQI 55
+ NGY CK G + + L + + K I P+ YN + L + T + F
Sbjct: 575 LVNGY----CKIGRIDEGLSLFREMLQKGI-KPSTILYNIIIDGLFEAGRTVPAKVKFHE 629
Query: 56 LKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFI-EEVVQIASPESIIVVNRIIFAFA 114
+ + S + C N + + C IF+ +E+ + +II +N +I
Sbjct: 630 MTE----SGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMF 685
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++R++E+A +F I P ++TY+I++ L + G V + + F+SM+ AG PD
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
N ++ L K + Y ++ E + LT L+D F G E +R
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 7/255 (2%)
Query: 19 VRLLQSLRDKNIFLPNAYNCVLVASA----ETNDIDLSFQILKDLLVSSRTLSSDCYTNF 74
V + + + + L NA ++V+ A E +D+ +L D + D Y
Sbjct: 336 VEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDL---CGLLDDFVKKGGNPGFDVYIMV 392
Query: 75 ARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKC 134
++ + ++ +++ +V + N +I F K+ ++KA I ++
Sbjct: 393 IKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGV 452
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
P+L+T+N ++ ++G V++ + E G++PD I++ +L+N L +LD
Sbjct: 453 LPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFD 512
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F EM E G++P+ TY L+ + G++ +++ L N MK+ I P Y + + I +
Sbjct: 513 CFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFC 572
Query: 255 KMGKVDLAMTIFEEM 269
+M KVD A IF M
Sbjct: 573 RMKKVDKARNIFNAM 587
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++ + + A +F + L +P YN ++ R G V+ F M G
Sbjct: 147 LIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADG 206
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD +YNTL++ + + +D L R+M +GI+P++ TYT L+D F G E+++
Sbjct: 207 CQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAV 266
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDN 252
+F+ MK++ + P+ YR+L+
Sbjct: 267 HVFDTMKEKGVSPNEASYRTLVHG 290
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 9/226 (3%)
Query: 51 LSFQILKDLL--VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNR 108
L +L LL V+S + DC F+ + I+E+ + +++ N
Sbjct: 409 LKRMVLDGLLSGVTSYNMVIDC-------FVKAGAVDKAAEIIKEMREKGVLPNLVTFNT 461
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I ++K + A + + PD+IT+ +++ L +++D + F M E G
Sbjct: 462 LISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWG 521
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V P+ +YN L++ L ++ + +M + GI PD ++ A I SF R ++++
Sbjct: 522 VRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKAR 581
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+FN M + + P Y Y SLI L ++D A I M SS S
Sbjct: 582 NIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGS 627
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 90 FIEEVVQIASP-ESIIVVNRIIFA------FAKSRQIEKAL--------------LIFDH 128
F+ V++ A+P + + V ++A FA+ + +AL +
Sbjct: 72 FVVRVLRGAAPLDPHLCVRLYVWASRFGAHFARDASVRRALEDALWRRGPAVLSAALVAE 131
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
++G C+ ++ GR+G F M G+ P YN L+ +
Sbjct: 132 VRGCGCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGA 191
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+D + F++M G +PD TY L+ + G I+E+LRL M+ IRP+++ Y
Sbjct: 192 VDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTM 251
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
L+D G+ + A+ +F+ M
Sbjct: 252 LVDGFCNAGRPEDAVHVFDTM 272
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 112/271 (41%), Gaps = 39/271 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ KAG V A +++ +R+K + LPN +N ++ ++ ++ + +LK L+
Sbjct: 425 NMVIDCFVKAGAVDKAAEIIKEMREKGV-LPNLVTFNTLISGYSKLGNVHNAKAVLKMLM 483
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L D II +I + Q++
Sbjct: 484 --EHGLIPD---------------------------------IITFTSLINGLCHTHQLD 508
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A F+ + +P+ TYN+++ L G VN ++ MK+ G+ PD S+N +
Sbjct: 509 DAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPI 568
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +++++D F M G+ PD TY +LI + I+E+ + M+
Sbjct: 569 LSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGSS 628
Query: 241 PSI-YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ + + ++ L K G+ A + + N
Sbjct: 629 ATTHHTHLPIVSALTKTGQFSKAGQLMNKYN 659
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 102/239 (42%), Gaps = 15/239 (6%)
Query: 33 PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIE 92
P + LVA ++S ++L+ L+ S L Y + +F++
Sbjct: 121 PAVLSAALVAEVRGCGCEVSEELLRALIASWGRLGLAQYAH--------------EVFVQ 166
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+ ++ S V N +I A ++ ++ A L F + C+PD TYN ++ + + G
Sbjct: 167 -MPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRG 225
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+++ L M+ AG+ P+ +Y L++ R + + F M E G+ P+ +Y
Sbjct: 226 IIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYR 285
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+ R ++ + + ++ P ++ ++ L K + + ++MNS
Sbjct: 286 TLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNS 344
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F +M G++P Y ALI + R G ++ + F M +P + Y +L+ + +
Sbjct: 164 FVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQ 223
Query: 256 MGKVDLAMTIFEEMNSS 272
G +D A+ + +M +
Sbjct: 224 RGIIDEALRLVRQMEGA 240
>gi|449439559|ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Cucumis sativus]
Length = 646
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I L K G A +LL + + + Y +L + D + ++L+ ++
Sbjct: 312 NSIIHGLSKEGGCMRAYQLLVEGVEFGYSPSEHTYKVLLEGLCKELDTQKAKEVLQIMIH 371
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + RA +T++ T+LL + E++Q +I +N +I F K IE+
Sbjct: 372 KQGVDRTRIYNIYLRAVCLTNNSTELLNTLVEMLQTNCQPDVITLNTVIKGFCKVGSIEE 431
Query: 122 ALLIF-DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN-EFASMKEAGVVPDFISYNTL 179
AL + D I G C PD +T+ ++ L VGR+ + L+ + M E G+VP I+YN
Sbjct: 432 ALKVLNDMIGGKFCTPDHVTFTTIIFGLLNVGRIRESLDILYKVMPEKGIVPGVITYNAT 491
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ L K+++ + + F M +GI+ D TY +ID IEE R + D+
Sbjct: 492 IRGLFKLQQANQAMNTFDRMVRNGIQADSTTYAVVIDGLCDCNQIEEVKRFWKDIVWPSK 551
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+VY +++ L K + A E++ S
Sbjct: 552 IHDSFVYSAILKGLCHSSKFNEACHFLYELSDS 584
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 8/176 (4%)
Query: 98 ASPE---SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
A PE SI+ NR+I F A + +K P++++Y ++D RV V
Sbjct: 120 AKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYCRVCNV 179
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD-----LCLIYFREMGESGIKPDLL 209
+ F M V P+ ++Y+ L+N R + +C ++ R GE +
Sbjct: 180 SAAEKLFDEMPGNYVEPNSLTYSVLINGFLYKRDFETGKALICNLWERMKGELDSSVNNA 239
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
+ L+DS G+ E + DM Q Q P + Y +ID+L K + A I
Sbjct: 240 AFAHLVDSLCLVGSFHEVFTIAEDMPQGQSVPEEFAYGQMIDSLCKAKRYHGASRI 295
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK--- 165
+I + + +A F +C PD T N++ + R+ D + + +++
Sbjct: 62 VIHGLCDAHRFHEAHCRFMLSIASRCVPDERTCNVL------IARLLDYRSPYCTLRLLV 115
Query: 166 -----EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ VP ++YN L++ ++ +M G P++++YTALID + R
Sbjct: 116 CLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYCR 175
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK-----KMGKVDLAMTIFEEMNSSL 273
N+ + +LF++M + P+ Y LI+ + GK L ++E M L
Sbjct: 176 VCNVSAAEKLFDEMPGNYVEPNSLTYSVLINGFLYKRDFETGKA-LICNLWERMKGEL 232
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P ++ YN ++D N MK G P+ +SY L++ ++ +
Sbjct: 126 PSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYCRVCNVSAAEKL 185
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ---QIRPSI--YVYRSLI 250
F EM + ++P+ LTY+ LI+ F + E L ++ ++ ++ S+ + L+
Sbjct: 186 FDEMPGNYVEPNSLTYSVLINGFLYKRDFETGKALICNLWERMKGELDSSVNNAAFAHLV 245
Query: 251 DNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
D+L +G TI E+M S P++F
Sbjct: 246 DSLCLVGSFHEVFTIAEDMPQGQSV---PEEF 274
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 133/271 (49%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ +LCK+GN + A+ L + + ++NI Y+ V+ + + D + + ++ +
Sbjct: 246 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 305
Query: 65 TLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
Y++ DD ++L E++ ++ + +I F K ++ +
Sbjct: 306 KADVVTYSSLIGGLCNDGKWDDGAKML---REMIGRNIIPDVVTFSALIDVFVKEGKLLE 362
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +++ + PD ITYN ++D + +++ F M G PD ++Y+ L+N
Sbjct: 363 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 422
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ K +R+D + FRE+ G+ P+ +TY L+ F ++G + + LF +M + + P
Sbjct: 423 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 482
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
S+ Y L+D L G+++ A+ IFE+M S
Sbjct: 483 SVVTYGILLDGLCDNGELNKALEIFEKMQKS 513
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 135/274 (49%), Gaps = 11/274 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LCK G+ A+ L + K I Y+ ++ D ++L++++ R
Sbjct: 281 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GR 338
Query: 65 TLSSDCYTNFARAFIMTDDCTQLL---IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ D T A + + L ++ E + + +P++I N +I F K + +
Sbjct: 339 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI-TYNSLIDGFCKENCLHE 397
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +FD + C+PD++TY+I+++ + RV+D + F + G++P+ I+YNTL+
Sbjct: 398 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 457
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ +L+ F+EM G+ P ++TY L+D G + ++L +F M++ ++
Sbjct: 458 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 517
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
I +Y +I + KVD A ++F SLSD
Sbjct: 518 GIGIYNIIIHGMCNASKVDDAWSLF----CSLSD 547
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 11/261 (4%)
Query: 15 VSAAVRLLQSL-RDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTN 73
V+ A+ L +S+ + + + P +N + A A T DL K + ++ + D YT
Sbjct: 80 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG--IEHDMYT- 136
Query: 74 FARAFIMTDDC-TQLLIFIEEVV----QIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
++ C + L+F V+ ++ I + ++ F ++ +A+ + D
Sbjct: 137 --MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 194
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ +K +PDL+T + +++ L GRV++ L M E G PD ++Y +LN L K
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L L FR+M E IK ++ Y+ +IDS + G+ +++L LFN+M+ + I+ + Y S
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 314
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
LI L GK D + EM
Sbjct: 315 LIGGLCNDGKWDDGAKMLREM 335
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
++ L+ I+ +V+ + ++ KS AL +F ++ K ++ Y+IV
Sbjct: 221 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 280
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+D L + G +D L+ F M+ G+ D ++Y++L+ L + D REM I
Sbjct: 281 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 340
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD++T++ALID F + G + E+ L+N+M + I P Y SLID K + A
Sbjct: 341 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 400
Query: 265 IFEEMNS 271
+F+ M S
Sbjct: 401 MFDLMVS 407
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 98/199 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
++ F + ++ + ++ +V++ ++ V+ +I ++ +AL++ D +
Sbjct: 172 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 231
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+PD +TY VL+ L + G L+ F M+E + + Y+ ++++L K D
Sbjct: 232 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 291
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L F EM GIK D++TY++LI G ++ ++ +M + I P + + +LI
Sbjct: 292 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 351
Query: 251 DNLKKMGKVDLAMTIFEEM 269
D K GK+ A ++ EM
Sbjct: 352 DVFVKEGKLLEAKELYNEM 370
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I N ++ F +S ++ A +F + P ++TY I+LD L G +N L F
Sbjct: 450 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 509
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+++ + YN +++ + ++D F + + G+KPD++TY +I + G+
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ E+ LF MK+ P + Y LI
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILI 596
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 103/235 (43%), Gaps = 3/235 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK + A ++ + K P+ Y+ ++ + + +D ++ +++
Sbjct: 383 NSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVDDGMRLFREIS 441
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ Y F + +E+V P S++ ++ + ++
Sbjct: 442 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 501
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL IF+ ++ + + YNI++ + +V+D + F S+ + GV PD ++YN ++
Sbjct: 502 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 561
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
L K L + FR+M E G PD TY LI + + S+ L +MK
Sbjct: 562 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 616
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ + +I ++ K+++++ + +F I P+ ITYN ++ + G++N F
Sbjct: 414 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 473
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M GV P ++Y LL+ L L+ L F +M +S + + Y +I
Sbjct: 474 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 533
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
++++ LF + + ++P + Y +I L K G + A +F +M D P DF
Sbjct: 534 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK---EDGCTPDDF 590
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 40/204 (19%)
Query: 101 ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
+ +I +NR F + + +LL + I K N ++DI +VND ++
Sbjct: 32 QRLIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDI-----KVNDAIDL 86
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK--------------- 205
F SM ++ +P I +N L + + + ++ DL L + + M +GI+
Sbjct: 87 FESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCR 146
Query: 206 --------------------PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
PD +T++ L++ F G + E++ L + M + + RP +
Sbjct: 147 KKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVT 206
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+LI+ L G+V A+ + + M
Sbjct: 207 VSTLINGLCLKGRVSEALVLIDRM 230
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 117/238 (49%), Gaps = 4/238 (1%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+A Y+ ++ A + ++ D+L ++ S Y N A + + + L
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++ ++ N ++ A+ RQ KAL F+ +KG K +PD T+NI++ L +
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 151 VGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+G+ + L+ F SM+E A PD +++ ++++ ++ C F M G+KP++
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
++Y AL+ ++ G +L + D+KQ I P + Y L+++ + + A +F
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ I+ ++ +IE +F+ + KP++++YN ++ G L+
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K+ G++PD +SY LLN+ + R+ F M + KP+++TY ALID++G G
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 223 NIEESLRLFNDMKQQQIRPSI 243
+ E++ +F M+Q I+P++
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNV 460
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I A+ +++A +F ++ CKPD TY+ +++ GR G+ +N M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 165 KEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
A + P +YN L+N N R+ L++C ++M ++G+ PDL+T+ ++ ++
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREA--LEVC----KKMTDNGVGPDLVTHNIVLSAY 258
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++L F MK ++RP + +I L K+G+ A+ +F M
Sbjct: 259 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A ++ Q A+ + D + P TYN +++ G G + L M + G
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V PD +++N +L+ + R+ L YF M + ++PD T+ +I + G ++L
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 229 RLFNDMKQQ--QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LFN M+++ + RP + + S++ G+++ +FE M
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 123/299 (41%), Gaps = 38/299 (12%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFL-PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
L K G S A+ L S+R+K P+ + ++ + +I+ + + ++
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y A+ + L + ++ Q ++ ++ ++ +SRQ KA +
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS---------- 175
F ++ + KP+++TYN ++D G G + + + F M++ G+ P+ +S
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 176 -------------------------YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
YN+ + + L+ + ++ M + +K D +T
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+T LI R E++ +M+ I + VY S++ K G+V A +IF +M
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 35/206 (16%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI----------------------- 143
N I ++ + ++EKA+ ++ ++ K K D +T+ I
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 144 ------------VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
VL + G+V + + F MK AG PD I+Y ++L+ +
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
EM +GI+PD + +AL+ +F + G L + M++++I + V+ +
Sbjct: 619 ACELLLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 678
Query: 252 NLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ + A+ + + M+ L L+
Sbjct: 679 ACNTLQEWKRAIDLIQMMDPYLPSLS 704
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR----RLDLCLIYF 196
+ +++ L R G + +N F MK + ++ + N + N + ++ +D F
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMK---IQKNYCARNDIYNMMIRLHARHNWVDQARGLF 166
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM + KPD TY ALI++ GR G ++ L +DM + I PS Y +LI+
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 257 GKVDLAMTIFEEM 269
G A+ + ++M
Sbjct: 227 GNWREALEVCKKM 239
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ + +++E+ ++ P + V + ++ A++K Q+ +A IF+ +K C+PD+I Y +L
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Query: 146 DILG---RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES 202
+ G+ ++L E M+ G+ PD I+ + L+ K + + M E
Sbjct: 608 HAYNASEKWGKACELLLE---MEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Query: 203 GIK------------------------------PDLLTYT-----ALIDSFGRTGNIEES 227
I P L + + ++ FG++G +E
Sbjct: 665 EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAM 724
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++LF + + ++ Y L+++L +G + + E M+ +
Sbjct: 725 MKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGA 769
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 52/284 (18%), Positives = 111/284 (39%), Gaps = 36/284 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVA-SAETNDIDLSFQILKDLLV 61
N I A + A+ L QS+R K + + +L++ S + + LK++
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S L+ + Y++ A+ T+ ++ +I ++ A+ S + K
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN------DMLNE-------------FA 162
A + ++ +PD I + ++ + G+ + D++ E F+
Sbjct: 619 ACELLLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 678
Query: 163 ---SMKEAGVVPDFISY-------------NTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+++E D I N +L+ K +++ + F ++ SG+
Sbjct: 679 ACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGI 738
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+L TY L++ GN + + + M I+PS +YR +I
Sbjct: 739 NLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 782
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 4/263 (1%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AG AV +++ +++ N F PN ++ +L A +T + + + +I +L S +
Sbjct: 396 AGQAEKAVAVMEKMKENN-FTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEV 454
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
+ + A+ ++L IE+ ++ ++ + I A AK+ Q + A +
Sbjct: 455 AWNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQM 514
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K C+P+++TY+ ++ G VG N + F SM G+ PD + LL K R+L
Sbjct: 515 KQSGCQPNIVTYSSLIKAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQL 574
Query: 190 DLCLIYFRE-MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
D + +F M GIKPD Y A+ + G + + +M+ P +Y +
Sbjct: 575 DKVMFFFDSMMPRYGIKPDKYAYAAIFWACWTCGEWQRAADYMENMEAAGCTPDTMIYTT 634
Query: 249 LIDNLKKMGKVDLAMTIFEEMNS 271
LI + G+VD AM I ++M++
Sbjct: 635 LITMYEAHGQVDKAMEILKKMDN 657
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
++ + +++I+E + +P+ I + ++ A A + Q EKA+ + + +K P+++++
Sbjct: 365 EEAVRTVVWIQE--KGFTPD-FITWSSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSW 421
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
+L + G F SM +G P+ +++N+LL+ K R+ L + E
Sbjct: 422 CYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSAYEKGRQWKRVLYTIEKQEE 481
Query: 202 SGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
G+K D++ ++ I + + G + + + MKQ +P+I Y SLI +G +
Sbjct: 482 LGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNK 541
Query: 262 AMTIFEEM 269
A ++F+ M
Sbjct: 542 AESVFKSM 549
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 112/259 (43%), Gaps = 7/259 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLS---FQIL 56
+C I L + A++L + + + I P +N ++VA D + F+ +
Sbjct: 210 VCTTLIAVLGYGRRLPEALKLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEM 269
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
K+L ++ ++ + A FI + +I + +A A++
Sbjct: 270 KELGLAPDNIT---FRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARA 326
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
R ++L + + C+P L YN +L + + + ++E G PDFI++
Sbjct: 327 RNSRESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITW 386
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++LL + + + +M E+ P+++++ L+ ++ +TGN E++ +F+ M
Sbjct: 387 SSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLN 446
Query: 237 QQIRPSIYVYRSLIDNLKK 255
P+ + SL+ +K
Sbjct: 447 SGCPPNEVAWNSLLSAYEK 465
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V +I R++ +AL +F ++ + + T+N ++ GR G + + F M
Sbjct: 210 VCTTLIAVLGYGRRLPEALKLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEM 269
Query: 165 KEAGVVPDFISYNTLLN---------------NLRKIRRLDLCLIYFREMG--------- 200
KE G+ PD I++ L++ NL + + F EM
Sbjct: 270 KELGLAPDNITFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNS 329
Query: 201 -----------ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
E G +P L Y AL+ ++ +T N EE++R ++++ P + SL
Sbjct: 330 RESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSL 389
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
+ G+ + A+ + E+M
Sbjct: 390 LGACANAGQAEKAVAVMEKM 409
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
H GL+ D+ + N+V+ LG++ + F + + A V P+ TL+ L R
Sbjct: 165 HETGLRV--DVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGR 222
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
RL L FR M + GI+ + T+ AL+ + GR G + ++ LF +MK+ + P +R
Sbjct: 223 RLPEALKLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFR 282
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNSS 272
L+ GK A + M +
Sbjct: 283 GLVSATTAAGKWKAAQSFINLMQAG 307
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 58/130 (44%)
Query: 106 VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK 165
+N +++ + R + A +F + +P+ ++ +LG R+ + L F M+
Sbjct: 176 MNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEALKLFRWME 235
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+ G+ ++N L+ + D + F EM E G+ PD +T+ L+ + G +
Sbjct: 236 KQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVSATTAAGKWK 295
Query: 226 ESLRLFNDMK 235
+ N M+
Sbjct: 296 AAQSFINLMQ 305
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 133/284 (46%), Gaps = 15/284 (5%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDL 59
C ++ LC +S A +L ++ K +PN C + ++ +I ++ ++ K++
Sbjct: 566 CTTLVKGLCMKHRISKATQLFLKMQ-KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624
Query: 60 LVSSRTLSSDCYTNFARAFIMTDD-CT-----QLLIFIEEVVQIASPESIIVVNRIIFAF 113
L + +C N I+ D C + +E+ + +I +I F
Sbjct: 625 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 684
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
+S + + A +F+ + + +PD+ T+++++D+L + G+V + M + G +P+
Sbjct: 685 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 744
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++Y TL+ L R+ F +M + G PD++TY L+ +TGNI+ +L L
Sbjct: 745 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 804
Query: 234 MKQ------QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M +P + Y +ID L K G+ D A +F+EM +
Sbjct: 805 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKA 848
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 18/278 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC +S A +L S++ K P+A Y ++ +T I+++ + +++L +
Sbjct: 277 IKGLCMKHRISEATQLFMSMK-KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT 335
Query: 64 RTLSSDCYTNFARAFIMTDD--CTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKS 116
C M D C + + +E ++Q I+ + +I
Sbjct: 336 SQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCME 395
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN-------DMLNEFASMKEAGV 169
+I +A +F ++ L C+PD ITY ++ L + G +N +MLN+
Sbjct: 396 HRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG-IKC 454
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P ISY+ +++ L K RR D F EM GI PD+++YT LI F +G E++
Sbjct: 455 KPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 514
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
LFN+M I+P + LID L K GKV A + E
Sbjct: 515 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 552
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 8/189 (4%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E ++Q + + ++ + +I +A +F ++ L C PD++TY ++ L
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 790
Query: 150 RVGRVNDMLNEFASM-KEAGVV-----PDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+ G + L M + G PD ISY+ +++ L K R D F+EM G
Sbjct: 791 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 850
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+ P++++YT+LI F R+G +E++ LFN+M Q ++ + Y +I K G++D A+
Sbjct: 851 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Query: 264 TIFEEMNSS 272
F++M ++
Sbjct: 911 --FQKMEAN 917
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 125/280 (44%), Gaps = 18/280 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC +S A L S++ K P+A Y ++ +T +I+++ Q+ +++L +
Sbjct: 96 IKGLCMEHRISEATWLFMSMQ-KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154
Query: 64 RTLSSDCYTNFARAFIMTDDCTQ-------LLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
C I+ D + +F E Q P+ +I +I F S
Sbjct: 155 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPD-VISYTSLIHGFCHS 213
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ EKA +F+ + + +PD+ T +++D+ + G+V + M G + D ++Y
Sbjct: 214 GKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTY 273
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL----FN 232
+TL+ L R+ F M + G +PD + Y L+ +TG I +L L N
Sbjct: 274 STLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN 333
Query: 233 DMKQ---QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
D Q + IRP + LID L K GKV A + E M
Sbjct: 334 DTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVM 373
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 130/281 (46%), Gaps = 17/281 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC +S A L S++ K P+A Y ++ +T +I+++ Q+ +++L +
Sbjct: 389 IKGLCMEHRISEATWLFMSMQ-KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 447
Query: 64 RTLSSDCYTNFARAFIMTDDCTQ-------LLIFIEEVVQIASPESIIVVNRIIFAFAKS 116
C I+ D + +F E Q P+ +I +I F S
Sbjct: 448 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD-VISYTTLIHGFCLS 506
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ EKA +F+ + + +PD+ T ++++D+L + G+V + + + G + D ++
Sbjct: 507 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTC 566
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TL+ L R+ F +M + G P+++T L+ ++GNI+ +L L +M
Sbjct: 567 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLS 626
Query: 237 Q------QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P+ Y +ID L K G+ D A +F+EM +
Sbjct: 627 DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKA 667
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 6/186 (3%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+I ++V + + + +I K ++ +A + + + C D++TY+ ++ L
Sbjct: 41 YIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 100
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM----GESGI- 204
R+++ F SM++ G PD I+Y TL+ L + +++ L +EM G GI
Sbjct: 101 MEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIK 160
Query: 205 -KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
KP L++Y+ +ID + +E+ LF +MK Q + P + Y SLI GK + A
Sbjct: 161 CKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAK 220
Query: 264 TIFEEM 269
+F EM
Sbjct: 221 CLFNEM 226
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 131 GLKC-KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
G+KC +PD+ T ++++DIL + G+V + M + G + D ++Y+TL+ L R+
Sbjct: 339 GIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRI 398
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ------QIRPSI 243
F M + G +PD +TY L+ +TGNI +L+L +M + +P++
Sbjct: 399 SEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTL 458
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +ID L K + D A +FEEM +
Sbjct: 459 ISYSIIIDGLCKDRREDEARELFEEMKAQ 487
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI- 129
YT + M D ++ ++ ++ ++ ++ ++ I+ AL + +
Sbjct: 747 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806
Query: 130 -----KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
G KPD+I+Y+I++D L + GR ++ F MK GV+P+ ISY +L++
Sbjct: 807 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 866
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ +L+ F EM + G++ + +TY+ +I F + G I+++L
Sbjct: 867 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+PD+ T ++++DIL + G+V + M + G + D ++Y+TL+ L R+
Sbjct: 51 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 110
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ------QIRPSIYVYRS 248
F M + G +PD +TY L+ +TGNI +L+L +M + +P++ Y
Sbjct: 111 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 170
Query: 249 LIDNLKKMGKVDLAMTIFEEMNSS 272
+ID L K + D A +F+EM +
Sbjct: 171 IIDGLCKDRREDEARELFKEMKAQ 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G+KCKP LI+Y+I++D L + R ++ F MK G++PD ISY TL++ + +
Sbjct: 451 GIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWE 510
Query: 191 LCLIYFREMGESGIKPDL-----------------------------------LTYTALI 215
F EM + GI+PD+ +T T L+
Sbjct: 511 KAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLV 570
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
I ++ +LF M++ P++ +L+ L + G + +A+ + + M S S
Sbjct: 571 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 629
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY---------NTLLNNLRKI 186
PD T+NI+++ L V RVN+ L A + G +PD ++Y + L++ L K
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
++ M + G D++TY+ LI I E+ LF M++ RP Y
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 247 RSLIDNLKKMGKVDLAMTIFEEM 269
+L+ L + G +++A+ + +EM
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEM 150
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLI---------YFREMGESGIKPDLLTYTAL 214
M+ AG+ PD ++N L+N L ++R++ L Y ++ I+PD+ T + L
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
ID + G + E+ L M Q+ I Y +LI L ++ A +F M
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ 116
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 270 N 270
+
Sbjct: 309 S 309
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ + CK G++ RL QS+ D K P+ +YN ++ D+D F++ +L
Sbjct: 149 MHRFCKDGDI----RLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 61 VSSRTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
S + D YT + M DD +L F E +V+ P + +I
Sbjct: 205 ASG--VQPDVYTYSVLINGLCKESKM-DDANEL--FDEMLVKGLVPNGVTFTT-LIDGHC 258
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ +++ A+ I+ + PDLITYN ++ L + G + + M G+ PD I
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 318
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 319 TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 379 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 48/94 (51%)
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+L +L K++ L ++ E+ E G L + L+ F + G+I + +F+ + +
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWG 172
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+RPS+ Y +L++ ++G +D + M +S
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGV 229
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 289
Query: 270 N 270
+
Sbjct: 290 S 290
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 42/270 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ K P+ +YN ++ D+D F++ +L S
Sbjct: 130 MHRFCKDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 188
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ D YT + +I K +++ A
Sbjct: 189 --VQPDVYT---------------------------------YSVLINGLCKESKMDGAN 213
Query: 124 LIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+FD +KGL P+ +T+ ++D + GRV+ + + M ++PD I+YNTL+
Sbjct: 214 GLFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 271
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K L EM G+KPD TYT LID + G+++ + M Q+ IR
Sbjct: 272 GLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 331
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LI L + G+ A + EM S
Sbjct: 332 DDVAYTALISGLCQEGRSVDAEKMLREMLS 361
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 65/138 (47%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E + F + +L +L K++ L
Sbjct: 50 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 109
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 170 RLGDLDEGFRLKSAMLAS 187
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 135/271 (49%), Gaps = 3/271 (1%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M N I+ LCK V+ A L + + IF PN Y+ ++ + +F +L +
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDARGIF-PNVITYSTLIYGFCLAGQLMEAFGLLNE 210
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+++ + + YT A + + + + +++ N ++ + +
Sbjct: 211 MILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGE 270
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ A +F + P++ +YNI++D L + RV++ +N + +VP+ ++Y++
Sbjct: 271 VQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSS 330
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K+ R+ L +EM G D++TYT+L+D+ + N++++ LF MK++
Sbjct: 331 LIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+P+ Y Y +LID L K G+ A +F+ +
Sbjct: 391 IQPNKYTYTALIDGLCKGGRHKNAQKLFQHL 421
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 5/274 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
I C AG + A LL + KNI PN Y ++ A + + + +L +
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNIN-PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG 250
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + + +VQ ++ N +I KS+++++A+
Sbjct: 251 VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAM 310
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + P+ +TY+ ++D ++GR+ L+ M G D ++Y +LL+ L
Sbjct: 311 NLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDAL 370
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + LD F +M E GI+P+ TYTALID + G + + +LF + + R ++
Sbjct: 371 CKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINV 430
Query: 244 YVYRSLIDNLKKMGKVD--LAMTIFEEMNSSLSD 275
+ Y +I L K G +D LAM E N + D
Sbjct: 431 WTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD 464
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
+++++ + I +N ++ +++K+L D + + D ++Y +L+ L ++G
Sbjct: 70 KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
L +++ P+ + YNT+++ L K + ++ + EM GI P+++TY+
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI F G + E+ L N+M + I P++Y Y L+D L K GKV A + M
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 110/234 (47%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C G V A ++ ++ K + PN +YN ++ ++ +D + +L+++L
Sbjct: 259 NTLMDGYCLIGEVQNAKQMFHTMVQKGVN-PNVYSYNIMIDRLCKSKRVDEAMNLLREVL 317
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ ++ Y++ F T L ++E+ P ++ ++ A K++ ++
Sbjct: 318 HKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLD 377
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA +F +K +P+ TY ++D L + GR + F + G + +YN ++
Sbjct: 378 KATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMI 437
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ L K LD L +M E+G PD +T+ +I S +++ +L ++M
Sbjct: 438 SGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 85/169 (50%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ N+I+ + K + A+ +F ++ +PDL T NI+++ +G++
Sbjct: 10 IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ + G P+ I+ NTL+ L + L + ++ G + D ++Y L++ + G
Sbjct: 70 KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+L+L ++ + RP++ +Y ++ID L K V+ A ++ EM++
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDA 178
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 119/279 (42%), Gaps = 5/279 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G V A LL + + + PN +YN ++ ++ + Q+ ++
Sbjct: 227 MDALCKEGKVKEAKNLLAVMTKEGV-KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + + + EV+ + + + +I F K +I AL
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSAL 345
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + D++TY +LD L + ++ F MKE G+ P+ +Y L++ L
Sbjct: 346 DLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R F+ + G + ++ TY +I + G ++E+L + + M++ P
Sbjct: 406 CKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDA 465
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+ +I +L + + D A + EM + DL +DF
Sbjct: 466 VTFEIIIRSLFEKDQNDKAEKLLHEMIA--KDLLRFRDF 502
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
P + +N ++ +L K++ + F++M GI+PDL T LI+ F G + S
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + + +P+ +L+ L G+V ++ +++
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKV 106
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 129/273 (47%), Gaps = 3/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA V A + + + K P+ AY+ ++ ++ +D + +++ ++
Sbjct: 148 VDGLCKAHKVERACDVFEEMIRKG-HKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARG 206
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ YT+ + + I+E+ + + + I+ + ++E+A
Sbjct: 207 PPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAF 266
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + C PD I+Y + ++ L +GR + F +M E G PD +Y +++N
Sbjct: 267 AVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNF 326
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + R M ++ +KP+ YT ++D F ++ +EE+L L+ + + I PS
Sbjct: 327 CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 386
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
Y ++I+ L K+ K+D A+ + EM +L
Sbjct: 387 VTYNTVINALCKLKKMDEALELLREMQRRKEEL 419
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCK-------PDLITYNIVLDILGRVGRVNDMLNEF 161
I+ A R ++KA+ F+ C+ PD +TY ++D L + G + L +
Sbjct: 70 ILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYY 129
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + P ++Y L++ L K +++ F EM G KPD++ Y++LID +
Sbjct: 130 EKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKA 189
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++E+ +L + M + P+ Y S++ L K G++ A+ +EM
Sbjct: 190 GRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 237
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 134/321 (41%), Gaps = 46/321 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ LCK G + AV+ +Q +R + + + Y+ ++ ++ +F +++++ + R
Sbjct: 218 VAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEM--ADR 275
Query: 65 TLSSDC--YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ D YT F A + E +V+ + II F K + A
Sbjct: 276 DCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAA 335
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + KP+ Y +++D + R+ + L + + + G++P ++YNT++N
Sbjct: 336 THVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINA 395
Query: 183 LRKIRRLDLCLIYFREMG-------------------------------------ESGIK 205
L K++++D L REM ++G+
Sbjct: 396 LCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI 455
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD TYT+LI + G + ++ L +M + I P + Y +L+ L + VD A +
Sbjct: 456 PDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDL 514
Query: 266 FEEMNSSLSDLAGPKDFKRKA 286
+EM + + P +F KA
Sbjct: 515 LQEM---MRNGHTPNEFTFKA 532
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 110/246 (44%), Gaps = 37/246 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I+ CK G+++AA +L+ L DK PN Y
Sbjct: 323 IDNFCKEGSMAAATHVLR-LMDKAAVKPNRY----------------------------- 352
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
YT F+ + + L + +++ S + N +I A K +++++AL +
Sbjct: 353 ----IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALEL 408
Query: 126 FDHIKGLK--CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ K +P ++TY++++ LG+VG + A M + GV+PD +Y +L+ L
Sbjct: 409 LREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTL 468
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
++ + EM ++GI PD TY L+ R+ +++ + L +M + P+
Sbjct: 469 AGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNE 527
Query: 244 YVYRSL 249
+ ++++
Sbjct: 528 FTFKAV 533
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 89/182 (48%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L + E++V +++ ++ K+ ++E+A +F+ + KPD+I Y+ ++D
Sbjct: 126 LEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDG 185
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L + GRV++ M G P ++Y +++ L K R+ + +EM ++P
Sbjct: 186 LSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPR 245
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ TY+ ++ + G +EE+ + +M + P Y I+ L +G+ + A +FE
Sbjct: 246 VDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFE 305
Query: 268 EM 269
M
Sbjct: 306 TM 307
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 47/171 (27%)
Query: 142 NIVLDILGRVGRVNDMLNEF-ASMKEAGVVPDFISYNTLLNN-------------LRKI- 186
N +L L R G+++D L F +S+ E P+ S+N LL LR++
Sbjct: 1 NSLLLALVRGGQLSDALGFFQSSISE----PNVSSFNILLRGFAARDDFEVVNALLREMK 56
Query: 187 ---------------------RRLDLCLIYFREMGESGIK-------PDLLTYTALIDSF 218
R LD + YF E + PD +TYTA++D
Sbjct: 57 ARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGL 116
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ GN + L + M + P++ Y L+D L K KV+ A +FEEM
Sbjct: 117 FKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEM 167
>gi|224137224|ref|XP_002322504.1| predicted protein [Populus trichocarpa]
gi|222867134|gb|EEF04265.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 100/169 (59%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I ++ + +EKAL ++D + K + D T++ ++ I G + LN +
Sbjct: 194 VTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYKDSGNFDCCLNVYEE 253
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK GV P+ + YNTLL+ + + RR +++++ +SG+ P TY AL+ ++GR
Sbjct: 254 MKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRARY 313
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++++++ +MK++++ ++ +Y +++ +G VD A+ IFE+M +S
Sbjct: 314 GEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMKNS 362
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 77/135 (57%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
+++ YN+ + +L + +N + F M E V PD ++++T+++ R D + +F
Sbjct: 122 EVVVYNVTMKVLRKCRDLNKVEKLFDEMIERAVKPDNVTFSTIISCARLCNLADKAVEWF 181
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
+M G+ PD +T++ +IDS+GR GN+E++L L++ + ++ R + +LI K
Sbjct: 182 EKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYKDS 241
Query: 257 GKVDLAMTIFEEMNS 271
G D + ++EEM +
Sbjct: 242 GNFDCCLNVYEEMKA 256
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I + S + L +++ +K L KP+L+ YN +LD +GR R + + ++G
Sbjct: 234 LIRIYKDSGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDIIDSG 293
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ P + +Y LL + R + + ++EM E + ++L Y ++ G ++E++
Sbjct: 294 LSPSYATYAALLRAYGRARYGEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAI 353
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+F DMK I P + + S+I GKV A + EM
Sbjct: 354 EIFEDMKNSGISPDSWTFSSMITMSSCCGKVSEAENMLNEM 394
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
EE+ + ++++ N ++ A ++R+ +A + I P TY +L GR
Sbjct: 252 EEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRA 311
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
D + + MKE + + + YNT+L + +D + F +M SGI PD T+
Sbjct: 312 RYGEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTF 371
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++I G + E+ + N+M + +P+I+V SLI K ++D + F +
Sbjct: 372 SSMITMSSCCGKVSEAENMLNEMFEAGFQPNIFVLTSLIQCYGKAQRIDDVVKTFNRL 429
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 77/152 (50%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F ++++ S ++ A+ ++R E + I+ +K + +++ YN +L +
Sbjct: 285 FYQDIIDSGLSPSYATYAALLRAYGRARYGEDTIKIYKEMKEKELSLNVLLYNTILAMCA 344
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+G V++ + F MK +G+ PD ++++++ ++ EM E+G +P++
Sbjct: 345 DLGFVDEAIEIFEDMKNSGISPDSWTFSSMITMSSCCGKVSEAENMLNEMFEAGFQPNIF 404
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
T+LI +G+ I++ ++ FN + + I P
Sbjct: 405 VLTSLIQCYGKAQRIDDVVKTFNRLYELLITP 436
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN +L A + + +D++ S + S Y RA+ + +E+
Sbjct: 266 YNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRARYGEDTIKIYKEMK 325
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+ ++++ N I+ A +++A+ IF+ +K PD T++ ++ + G+V+
Sbjct: 326 EKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTFSSMITMSSCCGKVS 385
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ N M EAG P+ +L+ K +R+D + F + E I PD L+
Sbjct: 386 EAENMLNEMFEAGFQPNIFVLTSLIQCYGKAQRIDDVVKTFNRLYELLITPDDRFCGCLL 445
Query: 216 DSFGRTGNIE 225
+ +T N E
Sbjct: 446 NVMTQTPNEE 455
>gi|242043154|ref|XP_002459448.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
gi|241922825|gb|EER95969.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
Length = 316
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 95/165 (57%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V N I+A+ K ++++A L F+ ++ L PD++TY V+D L ++GR++D ++ F M
Sbjct: 82 VFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQM 141
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G+ P+ I++ TL++ + + F EM + GI P++ T+ ++ID + G +
Sbjct: 142 IDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNTFNSMIDRLFKEGKV 201
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E+ +LF+ M + +P++ Y ++I G+V M + ++M
Sbjct: 202 TEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 246
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + +I KS +A IF+ + KP+ TY +L G + DM N
Sbjct: 9 NVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDMNNVK 68
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G+ PD +N + K RLD + F +M + G PD++TYT +ID +
Sbjct: 69 DLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCKI 128
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +++++ F M + P+I + +LI GK + A +F EM
Sbjct: 129 GRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEM 176
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP +II +I F+ + EKA +F + P++ T+N ++D L + G+V +
Sbjct: 147 SP-NIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNTFNSMIDRLFKEGKVTEAR 205
Query: 159 NEFASMKEAGVVPDFISYNTLLNN------LRKIRRL--DLCLIYFRE-----------M 199
F M AG P+ +SYNT+++ + ++ +L D+ LI + M
Sbjct: 206 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPNAVNLNTLLDGM 265
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
G+KP++ T LIDS IE+ L LF +M
Sbjct: 266 LSIGLKPNVDTCKTLIDSCCEDDRIEDILTLFREM 300
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M G P+++TY+ LI+ ++G E+ +FN M Q +P+ YRSL+ G
Sbjct: 1 MSRDGQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGN 60
Query: 259 V 259
+
Sbjct: 61 L 61
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 270 N 270
+
Sbjct: 309 S 309
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ + CK G++ RJ QS+ D K P+ +YN ++ D+D F++ +L
Sbjct: 149 MHRFCKDGDI----RJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 61 VSSRTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
S + D YT + M DD +L F E +V+ P + +I
Sbjct: 205 ASG--VQPDVYTYSVLINGLCKESKM-DDANEL--FDEMLVKGLVPNGVTFTT-LIDGHC 258
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ +++ A+ I+ + PDLITYN ++ L + G + + M G+ PD I
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 318
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 319 TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 379 LSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQ 414
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 42/251 (16%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + K + +PN + ++ + +DL+ +I K +L S
Sbjct: 219 INGLCKESKMDDANELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 275
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 276 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAH 302
Query: 124 LIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D +KGLK PD ITY ++D + G ++ M + + D ++Y L++
Sbjct: 303 HLIDEMSVKGLK--PDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALIS 360
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R REM G+KPD TYT +I+ F + G++ + +L +M++ P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVP 420
Query: 242 SIYVYRSLIDN 252
S+ Y L++
Sbjct: 421 SVVTYNVLMNG 431
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 64/138 (46%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ DJ ++ ++ G + D + + +E F + +L +L K++ L
Sbjct: 69 RSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 189 RLGDLDEGFRLKSAMLAS 206
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 99/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ +M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 23/268 (8%)
Query: 17 AAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+RL QS+ D K P+ ++N ++ + D+D F+ LK+ + +S + D Y
Sbjct: 150 GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFR-LKNAMQAS-GVQPDVY 207
Query: 72 T------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
T + M DD +L +E++ + + +I K+ +++ A+ I
Sbjct: 208 TYSVLINGLCKESKM-DDANELF---DEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + PDLITYN ++ L + G + D+++E SMK G+ PD I+Y TL++
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMK--GLKPDKITYTTLIDG 320
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K L+ Y + M + I+ D + YTALI + G ++ ++ +M ++P
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I Y +I+ K G V + +EM
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + D N +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KP++ TYT +I+ F + G++ +L +M++ PS+
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + ++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL N M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 232
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G +D + M +S
Sbjct: 183 KLGDLDEGFRLKNAMQAS 200
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 103/181 (56%), Gaps = 1/181 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQ-IEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F +E+ + P +++ +N +I A K+ + +E A +F + C+PD TY +++ L
Sbjct: 142 FYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGL 201
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
++G+++ M+E G+ P +SY +L++ L + LD + EM +GI+P++
Sbjct: 202 CKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNV 261
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY++L+D ++G+ +++ L M ++++ P++ Y +LI+ L K GK A+ I +
Sbjct: 262 FTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDR 321
Query: 269 M 269
M
Sbjct: 322 M 322
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 7/165 (4%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMK 165
+I Q A + + +K C+ +T ++ L I GRV R D + F M+
Sbjct: 56 MIHRLVSVNQFRPAEGMLERMKQEDCE---VTEDVFLTICRGYGRVHRPLDAIRVFHKME 112
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT-GNI 224
+ V P SY T+ + L + + + +++EM E GI P +++ LI + + +
Sbjct: 113 DFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETV 172
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
E + RLF +M + +P Y Y +LI+ L K+GK+ A + +EM
Sbjct: 173 ESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEM 217
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 120/274 (43%), Gaps = 11/274 (4%)
Query: 6 IEKLCK-AGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVS 62
I+ LCK V +A RL + + ++ P++Y ++ + I + ++L ++
Sbjct: 162 IKALCKNEETVESAFRLFREMPNRGC-QPDSYTYGTLINGLCKLGKISQAKELLDEMEEK 220
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ S YT+ +++ + + +EE++ ++ + ++ KS +A
Sbjct: 221 GLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQA 280
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + + + + P+++TY+ +++ L + G+ + + M+ G+ PD Y +++
Sbjct: 281 MELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISG 340
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF-----GRTGNIE--ESLRLFNDMK 235
L + EM GI P+ ++T + G N++ + +L+ M+
Sbjct: 341 LCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMR 400
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I I + L+ K G ++ A I EEM
Sbjct: 401 TRGISVEIGTFDCLVKCFCKRGDLNKAARILEEM 434
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I CK + AA ++L ++ + FLP+ YN ++ + + L+ ++L LL
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARG-FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL 199
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + YT A I+ + + +EE++ + N II K +E
Sbjct: 200 LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 259
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + + CKPD+I+YNI+L G+ ++ A M G P+ ++Y+ L+
Sbjct: 260 RAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 319
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++L + R+D + + M E + PD +Y LI + + G ++ ++ + + M
Sbjct: 320 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 379
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P I Y +++ L K G + A+ IF ++
Sbjct: 380 PDIVNYNTILAALCKNGNANQALEIFNKL 408
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L F+E +V +I+ ++I F + IEKA + + ++ +PD+ YN V+
Sbjct: 88 LYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-HTEPDVFAYNAVISG 146
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+V R+ MK G +PD ++YN ++ +L R+L L L ++ P
Sbjct: 147 FCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPT 206
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++TYT LI++ G I E+++L +M + + P +Y Y ++I + K G V+ A +
Sbjct: 207 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 266
Query: 268 EMNS 271
+ S
Sbjct: 267 SLTS 270
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 40/319 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDK---------NIFL--------------------- 32
N I +CK G V A L+ SL K NI L
Sbjct: 246 NAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFS 305
Query: 33 ----PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQ 86
PN Y+ ++ + ID + +LK ++ T + Y A
Sbjct: 306 RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDL 365
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
+ ++ ++ I+ N I+ A K+ +AL IF+ ++G+ C P++ +YN ++
Sbjct: 366 AIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMIS 425
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L G + L +M GV PD I+YN+L++ L + ++ + +M +SG +P
Sbjct: 426 ALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP 485
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+++Y ++ + I++++ +F +M ++ RP+ Y LI+ + G AM
Sbjct: 486 TVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM--- 542
Query: 267 EEMNSSLS-DLAGPKDFKR 284
E NS S D+ FKR
Sbjct: 543 ELANSLFSRDVISQDSFKR 561
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LLN K + + L + + G PD++ T LI F NIE++ R+ ++ +
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P ++ Y ++I K+ +++ A + M +
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKA 165
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 35/272 (12%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN +L + + + Q+L ++ Y+ A+ I ++E+
Sbjct: 294 AYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 353
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
S V +RI+ F + +KA + + +PD YN+++D G+ +
Sbjct: 354 EADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL 413
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES------------ 202
++ F M+E G+ PD +++NTL++ K R D + F EM ES
Sbjct: 414 GHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIM 473
Query: 203 -----------------------GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
G+ P+++TYT L+D +GR+G +E++ MK +
Sbjct: 474 INLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGL 533
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+PS +Y +L++ + G D A+ + + M +
Sbjct: 534 KPSPTMYHALVNAYAQRGLADHALNVVKAMRA 565
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ + K ++ A + D + PD TY++++D R GR M+
Sbjct: 296 NALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA 355
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV P ++ +L R REM SG++PD Y +ID+FG+ +
Sbjct: 356 DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGH 415
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ F+ M+++ I P + + +LID K G+ D A+ +F+EM S
Sbjct: 416 AMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRES 461
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
++ +AG +A LL+ + + P++Y + +L + + +F +L+++ S
Sbjct: 334 VDAYTRAGRWESARILLKEMEADGV-KPSSYVFSRILAGFRDRGEWQKAFAVLREMHASG 392
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + + + + ++ N +I A K + ++A+
Sbjct: 393 VRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAI 452
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD ++ C TYNI++++LG R + A MKE G+VP+ I+Y TL++
Sbjct: 453 ELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVY 512
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R + M G+KP Y AL++++ + G + +L + M+ + S
Sbjct: 513 GRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST 572
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
V SLI+ + ++ A ++ + M
Sbjct: 573 VVLNSLINAFGEDRRIAEAFSVLQFMK 599
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I AFA++R + AL + + + P ++ LG RV + F AG
Sbjct: 227 LISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAG 286
Query: 169 VV-PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
+ P +YN LL KI L EM + G+ PD TY+ L+D++ R G E +
Sbjct: 287 EIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 346
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L +M+ ++PS YV+ ++ + G+ A + EM++S
Sbjct: 347 RILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS 391
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E+ + P N +I + ++ E + +K P++ITY ++D+ G
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R GR + ++ +MK G+ P Y+ L+N + D L + M G++ +
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 573
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LI++FG I E+ + MK+ +RP + Y +L+ L ++ + + I+EEM
Sbjct: 574 VLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 633
Query: 270 NSS 272
+S
Sbjct: 634 ITS 636
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 1/207 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK G A+ L +R+ N L YN ++ E + +L ++
Sbjct: 435 WNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMK 494
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT + + + + IE + S + + ++ A+A+ +
Sbjct: 495 EQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLAD 554
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + ++ + + N +++ G R+ + + MKE G+ PD I+Y TL+
Sbjct: 555 HALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLM 614
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPD 207
L ++ + + + + EM SG PD
Sbjct: 615 KALIRVEQFEKVPVIYEEMITSGCAPD 641
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S +V+N +I AF + R+I +A + +K +PD+ITY ++ L RV + + +
Sbjct: 571 STVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIY 630
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRL 189
M +G PD + L + LR ++ +
Sbjct: 631 EEMITSGCAPDRKARAMLRSALRYMKHM 658
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 99/182 (54%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E +V + ++ N +I + + R + A IF+ +K +PD ITYN +++ L +
Sbjct: 357 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ V + M+++GV P ++NTL++ +L+ C +M + GIK D+++
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +++ +F + G I E++ + +DM + + P+ VY S+ID + G + A + E+M
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 536
Query: 271 SS 272
+S
Sbjct: 537 NS 538
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 7/253 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK V+ A L+ + +K+ P+ +N ++ A ++ F +L D+
Sbjct: 408 NALINGLCKLEMVTKAEDLVMEM-EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM- 465
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + SD + + +AF + + +++++ + V N II A+ +S
Sbjct: 466 -QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
E+A L+ + +K ++TYN++L L R ++++ +++ G+ PD +SYNT
Sbjct: 525 TEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ D L +EM + GI+P L TY L+ + G + + L+ M +
Sbjct: 585 IISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKN 644
Query: 239 IRPSIYVYRSLID 251
+ PS +Y ++D
Sbjct: 645 VEPSSSIYGIMVD 657
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
C+ + LCK G V+ A ++L+ L + +P YN ++ + D+ +F I + +
Sbjct: 337 CSILLNGLCKDGKVAKAEQVLEMLVHTGL-VPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395
Query: 60 LVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
SR + D Y + T+ + E+ + S+ N +I A+ +
Sbjct: 396 --KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
Q+EK + ++ K D+I++ V+ + G++ + + M V P+ YN
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++++ + + + +M SG+ ++TY L+ R+ I+E+ L ++ Q
Sbjct: 514 SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RP + Y ++I G D A+ + +EMN
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 119/268 (44%), Gaps = 5/268 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
NGY C+ ++ A + + ++ ++I + YN ++ + + + ++ ++
Sbjct: 377 NGY----CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 432
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S S + + A+ + + ++ Q +I ++ AF K+ +I +
Sbjct: 433 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ I D + P+ YN ++D G MK +GV ++YN LL
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 552
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + ++D + G++PD+++Y +I + G+ +++L L +M + IRP
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y +L+ L G+V ++++M
Sbjct: 613 TLRTYHTLVSALASAGRVHDMECLYQQM 640
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 124/276 (44%), Gaps = 9/276 (3%)
Query: 2 CNGYIEKLCKAG---NVSAAVRLLQSLRDK-NIFLPNAYNCVLVASAETNDIDLSFQILK 57
CN +E L G +V AA LL + + + F A+N V+ A D+D++ +++
Sbjct: 125 CNLLLESLLFVGRHADVRAAFGLLVAAGARPDTF---AWNKVVQACVAAGDLDVALAMVR 181
Query: 58 DLLVSSRTLSSDCYT-NFARAFIM-TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+ S D ++ N A + + + L +E+V + + I N +I K
Sbjct: 182 RMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVK 241
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+E + D + KP+++TYN++L L R GR+++ M + PD +
Sbjct: 242 GGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFT 301
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y+ L + L + L F E + G+ T + L++ + G + ++ ++ +
Sbjct: 302 YSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLV 361
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P+ +Y +LI+ ++ + A IFE+M S
Sbjct: 362 HTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ AG + +L ++ K I ++ V+ A + I + IL D++
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 502
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ Y + A+I + D Q + +E++ SI+ N ++ +S QI++
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + ++ +PD+++YN ++ G + L M + G+ P +Y+TL++
Sbjct: 563 AEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVS 622
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L R+ +++M ++P Y ++D++ R N + L +M ++ I
Sbjct: 623 ALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P L + N++L+ L VGR D+ F + AG PD ++N ++ LD+ L
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 196 FREMG--ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
R MG E PD +Y +I R+G ++L++F++M + P+ Y ++ID
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239
Query: 254 KKMGKVDLAMTIFEEMNSSLSDLAGPK 280
K G ++ + ++M L D GPK
Sbjct: 240 VKGGDLEAGFRLRDQM---LHD--GPK 261
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 101/182 (55%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E +V + + N +I + + R ++ A IF+ +K +PD ITYN +++ L +
Sbjct: 358 LEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ + + + M+++GV P ++NTL++ + +L+ C +M + GIK ++++
Sbjct: 418 MEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVIS 477
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +++ +F + G I E++ + +DM + + P+ VY S+ID + G + A + E+M
Sbjct: 478 FGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMK 537
Query: 271 SS 272
SS
Sbjct: 538 SS 539
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 124/267 (46%), Gaps = 9/267 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK ++ A L+ + +K+ P+ +N ++ A ++ F +L D+
Sbjct: 409 NALINGLCKMEMITEAEDLVMEM-EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQ 467
Query: 61 ---VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ S +S + + +AF + + +++++ + V N II A+ +S
Sbjct: 468 DKGIKSNVIS---FGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESG 524
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
E+A L+ + +K + TYN++L L + ++++ ++ G+ PD +SYN
Sbjct: 525 GTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYN 584
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T+++ D L +EM + I+P L TY L+ + G G + + L+ M +
Sbjct: 585 TIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHK 644
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+ PS +Y + +N K+ + M+
Sbjct: 645 NVEPSSSIYGTRCENESKVASLKKEMS 671
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLL 60
C+ + LCK G V+ A ++L+ L + A YN ++ + D+ +F I + +
Sbjct: 338 CSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM- 396
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
SR + D Y + T+ + E+ + S+ N +I A+ ++ Q
Sbjct: 397 -KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQ 455
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+EK + ++ K ++I++ V+ + G++ + + M VVP+ YN+
Sbjct: 456 LEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNS 515
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + + + +M SG+ + TY L+ + I+E+ L ++ Q
Sbjct: 516 IIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQG 575
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RP + Y ++I G D A+ + +EM+
Sbjct: 576 LRPDVVSYNTIISACCNKGDTDRALELLQEMH 607
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASM--KEAGVVPDFISYNTLLNNLRKIRRLDLC 192
+PD +N + G +++ L M E PD SYN ++ L + +
Sbjct: 155 RPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 214
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L F EM + G+ P+ +TY +ID + G++E RL + M Q +P++ Y L+
Sbjct: 215 LKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSG 274
Query: 253 LKKMGKVDLAMTIFEEMNS 271
L + G++D + +EM S
Sbjct: 275 LCRAGRMDETRALMDEMTS 293
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 11/277 (3%)
Query: 2 CNGYIEKLCKAG---NVSAAVRLLQSLRDK-NIFLPNAYNCVLVASAETNDIDLSFQILK 57
CN +E L G +V AA LL + + + F A+N + A D+D + +L+
Sbjct: 126 CNLLLESLLSVGRHADVRAAFGLLVAAGARPDTF---AWNKAVQACVAAGDLDEALAMLR 182
Query: 58 DLLVSSRTLSSDCYTN---FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
+ S D ++ A + L +F E V + +P I N +I
Sbjct: 183 RMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQI-TYNTMIDGHV 241
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K +E + D + KP+++TYN++L L R GR+++ M ++PD
Sbjct: 242 KGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGF 301
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y+ L + L + L F E + G+ T + L++ + G + ++ ++ +
Sbjct: 302 TYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEML 361
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ P+ +Y +LI+ ++ + A +IFE+M S
Sbjct: 362 VHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKS 398
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P L + N++L+ L VGR D+ F + AG PD ++N + LD L
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 196 FREMG--ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
R MG E PD +Y +I R+G ++L++F++M + + P+ Y ++ID
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 254 KKMGKVDLAMTIFEEM 269
K G ++ + ++M
Sbjct: 241 VKGGDLEAGFRLRDQM 256
>gi|293336971|ref|NP_001167873.1| uncharacterized protein LOC100381578 [Zea mays]
gi|223944573|gb|ACN26370.1| unknown [Zea mays]
gi|414585240|tpg|DAA35811.1| TPA: hypothetical protein ZEAMMB73_503732 [Zea mays]
Length = 640
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P+ V+ +I A +K + +AL +F+ + C + Y ++D +G+ GR + +
Sbjct: 312 PQHAYVL--VIGALSKDGKPFEALAVFERMSKRGCPANAAMYTALIDSMGKFGREKEAMA 369
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F MK G+ D ++Y ++N L + L+ L FR E G+ + + YT+LID FG
Sbjct: 370 LFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVEKGVAVNAIFYTSLIDGFG 429
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+TG ++++ LF +M + P Y Y LID L K G+ D A ++ M D
Sbjct: 430 KTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRTDDACAFYKRMEDDGCD 485
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 101/193 (52%), Gaps = 5/193 (2%)
Query: 85 TQLLIFIEEVVQIASPE-SIIVVNRIIFAFAKSRQIEKALLIFDHIKG-LKCKPDLITYN 142
++ L++ + +++A E S + N ++ + ++ A+ +FD + + +PD+++YN
Sbjct: 185 SEELLWAWQAMRLAGVEPSRLTYNCLLDGLVNADLLDTAINVFDAMSTEHRVRPDVVSYN 244
Query: 143 IVLDILGRVGRVNDMLNEFASMKE-AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
I++ R GR D + A M+E A + PD ++Y TL+ C+ F+EM E
Sbjct: 245 ILIKGYCRAGRTQDAMARLADMREHAELAPDKVTYLTLMQRHYSEATFPQCIALFQEMEE 304
Query: 202 SGIKPDL--LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G+ ++ Y +I + + G E+L +F M ++ + +Y +LID++ K G+
Sbjct: 305 RGMGKEIPQHAYVLVIGALSKDGKPFEALAVFERMSKRGCPANAAMYTALIDSMGKFGRE 364
Query: 260 DLAMTIFEEMNSS 272
AM +FE M ++
Sbjct: 365 KEAMALFERMKAT 377
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 6/269 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLS-----FQILKDLL 60
I+ C+AG A+ L +R+ P+ + + ++ FQ +++
Sbjct: 247 IKGYCRAGRTQDAMARLADMREHAELAPDKVTYLTLMQRHYSEATFPQCIALFQEMEERG 306
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + Y A + L E + + P + + +I + K + +
Sbjct: 307 MG-KEIPQHAYVLVIGALSKDGKPFEALAVFERMSKRGCPANAAMYTALIDSMGKFGREK 365
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +F+ +K + D +TY +V++ L R G + + L F S E GV + I Y +L+
Sbjct: 366 EAMALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVEKGVAVNAIFYTSLI 425
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K +D F EM G PD Y LID+ + G +++ + M+
Sbjct: 426 DGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRTDDACAFYKRMEDDGCD 485
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++Y Y LID L K K + A+ ++ M
Sbjct: 486 QTVYTYTILIDGLFKEHKNEEALKFWDSM 514
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI-------VLDILGRVGRVNDMLNEF 161
++ +FA+SR+ + A + L+ D + ++ ++ L G ++L +
Sbjct: 133 LLHSFARSRETDAAGQARQLVAELRAHGDAVLSHLTPASSASLIRSLAAFGLSEELLWAW 192
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG-ESGIKPDLLTYTALIDSFGR 220
+M+ AGV P ++YN LL+ L LD + F M E ++PD+++Y LI + R
Sbjct: 193 QAMRLAGVEPSRLTYNCLLDGLVNADLLDTAINVFDAMSTEHRVRPDVVSYNILIKGYCR 252
Query: 221 TGNIEESLRLFNDMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G ++++ DM++ ++ P Y +L+ + +F+EM
Sbjct: 253 AGRTQDAMARLADMREHAELAPDKVTYLTLMQRHYSEATFPQCIALFQEME 303
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 101 ESIIVVNRIIF-----AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
E + VN I + F K+ +++A +F+ + PD YN+++D L + GR +
Sbjct: 411 EKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRTD 470
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D + M++ G +Y L++ L K + + L ++ M + GI P + AL
Sbjct: 471 DACAFYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRALS 530
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+ +G + R+ +++ + P + +I+ L K G+ A
Sbjct: 531 NGLCLSGKFSRAWRILDELAPMGVIPET-AHEDMINVLCKTGRFKQA 576
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 108/266 (40%), Gaps = 2/266 (0%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDL 59
M I+ + K G A+ L + ++ I L Y V+ +++ + +
Sbjct: 350 MYTALIDSMGKFGREKEAMALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSC 409
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ +++ YT+ F T Q EE+V N +I A K+ +
Sbjct: 410 VEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRT 469
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A + ++ C + TY I++D L + + + L + SM + G+ P ++ L
Sbjct: 470 DDACAFYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRAL 529
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
N L + E+ G+ P+ + +I+ +TG +++ +L + + Q+
Sbjct: 530 SNGLCLSGKFSRAWRILDELAPMGVIPE-TAHEDMINVLCKTGRFKQACKLADGIVQKGR 588
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTI 265
V +I+ L+K G DLA +
Sbjct: 589 EIPGRVRTMMINALRKAGNTDLAFKL 614
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 117/238 (49%), Gaps = 4/238 (1%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+A Y+ ++ A + ++ D+L ++ S Y N A + + + L
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++ ++ N ++ A+ RQ KAL F+ +KG K +PD T+NI++ L +
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 151 VGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+G+ + L+ F SM+E A PD +++ ++++ ++ C F M G+KP++
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
++Y AL+ ++ G +L + D+KQ I P + Y L+++ + + A +F
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ I+ ++ +IE +F+ + KP++++YN ++ G L+
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K+ G++PD +SY LLN+ + R+ F M + KP+++TY ALID++G G
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 223 NIEESLRLFNDMKQQQIRPSI 243
+ E++ +F M+Q I+P++
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNV 460
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I A+ +++A +F ++ CKPD TY+ +++ GR G+ +N M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 165 KEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
A + P +YN L+N N R+ L++C ++M ++G+ PDL+T+ ++ ++
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREA--LEVC----KKMTDNGVGPDLVTHNIVLSAY 258
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++L F MK ++RP + +I L K+G+ A+ +F M
Sbjct: 259 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A ++ Q A+ + D + P TYN +++ G G + L M + G
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V PD +++N +L+ + R+ L YF M + ++PD T+ +I + G ++L
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 229 RLFNDMKQQ--QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LFN M+++ + RP + + S++ G+++ +FE M
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD-------------------- 146
N I ++ + ++EKA+ ++ ++ K K D +T+ I++
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 147 ---ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
L + G+V + + F MK AG PD I+Y ++L+ + F EM +G
Sbjct: 559 LSIPLTKEGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 618
Query: 204 IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
I+PD + +AL+ +F + G L + M++++I + V+ + + + A+
Sbjct: 619 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 678
Query: 264 TIFEEMNSSLSDLA 277
+ + M+ L L+
Sbjct: 679 DLIQMMDPYLPSLS 692
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/325 (17%), Positives = 123/325 (37%), Gaps = 61/325 (18%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFL-PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
L K G S A+ L S+R+K P+ + ++ + +I+ + + ++
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y A+ + L + ++ Q ++ ++ ++ +SRQ KA +
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS---------- 175
F ++ + KP+++TYN ++D G G + + + F M++ G+ P+ +S
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 176 -------------------------YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
YN+ + + L+ + ++ M + +K D +T
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 211 YTALIDS-----------------------FGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+T LI + G + E+ +FN MK P + Y
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEGQVTEAESIFNQMKMAGCEPDVIAYT 592
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNSS 272
S++ K A +F EM ++
Sbjct: 593 SMLHAYNASEKWGKACELFLEMEAN 617
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR----RLDLCLIYF 196
+ +++ L R G + +N F MK + ++ + N + N + ++ +D F
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMK---IQKNYCARNDIYNMMIRLHARHNWVDQARGLF 166
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM + KPD TY ALI++ GR G ++ L +DM + I PS Y +LI+
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 257 GKVDLAMTIFEEM 269
G A+ + ++M
Sbjct: 227 GNWREALEVCKKM 239
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 171
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 231
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291
Query: 270 N 270
+
Sbjct: 292 S 292
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 19/275 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ + CK G++ R+ QS+ D K P+ +YN ++ D+D F++ +L
Sbjct: 132 MHRFCKDGDI----RIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187
Query: 61 VSSRTLSSDCYT-----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
S + D YT N DD +L F E +V+ P S+ +I K
Sbjct: 188 ASG--VQPDVYTYSVLINGLCKESKIDDANEL--FDEMLVKGLVPNSVTFTT-LIDGHCK 242
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ +++ A+ I+ + PDLITYN ++ L + G + + M G+ PD I+
Sbjct: 243 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 302
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y TL++ K LD + + M + + D + YTALI R G ++ ++ +M
Sbjct: 303 YTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREML 362
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V + +EM
Sbjct: 363 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 397
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 64/138 (46%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ DL ++ ++ G + D + + +E F + +L +L K++ L
Sbjct: 52 RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 111
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 171
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 172 RLGDLDEGFRLKSAMLAS 189
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 117/238 (49%), Gaps = 4/238 (1%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
P+A Y+ ++ A + ++ D+L ++ S Y N A + + + L
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+++ ++ N ++ A+ RQ KAL F+ +KG K +PD T+NI++ L +
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 151 VGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+G+ + L+ F SM+E A PD +++ ++++ ++ C F M G+KP++
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
++Y AL+ ++ G +L + D+KQ I P + Y L+++ + + A +F
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ I+ ++ +IE +F+ + KP++++YN ++ G L+
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+K+ G++PD +SY LLN+ + R+ F M + KP+++TY ALID++G G
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 223 NIEESLRLFNDMKQQQIRPSI 243
+ E++ +F M+Q I+P++
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNV 460
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I A+ +++A +F ++ CKPD TY+ +++ GR G+ +N M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 165 KEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
A + P +YN L+N N R+ L++C ++M ++G+ PDL+T+ ++ ++
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREA--LEVC----KKMTDNGVGPDLVTHNIVLSAY 258
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++L F MK ++RP + +I L K+G+ A+ +F M
Sbjct: 259 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A ++ Q A+ + D + P TYN +++ G G + L M + G
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
V PD +++N +L+ + R+ L YF M + ++PD T+ +I + G ++L
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 229 RLFNDMKQQ--QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LFN M+++ + RP + + S++ G+++ +FE M
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 123/299 (41%), Gaps = 38/299 (12%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFL-PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
L K G S A+ L S+R+K P+ + ++ + +I+ + + ++
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
+ Y A+ + L + ++ Q ++ ++ ++ +SRQ KA +
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS---------- 175
F ++ + KP+++TYN ++D G G + + + F M++ G+ P+ +S
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 176 -------------------------YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
YN+ + + L+ + ++ M + +K D +T
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+T LI R E++ +M+ I + VY S++ K G+V A +IF +M
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNI----------------------- 143
N I ++ + ++EKA+ ++ ++ K K D +T+ I
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 144 ------------VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
VL + G+V + + F MK AG PD I+Y ++L+ +
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
F EM +GI+PD + +AL+ +F + G L + M++++I + V+ +
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 678
Query: 252 NLKKMGKVDLAMTIFEEMNSSLSDLA 277
+ + A+ + + M+ L L+
Sbjct: 679 ACNTLQEWKRAIDLIQMMDPYLPSLS 704
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR----RLDLCLIYF 196
+ +++ L R G + +N F MK + ++ + N + N + ++ +D F
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMK---IQKNYCARNDIYNMMIRLHARHNWVDQARGLF 166
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM + KPD TY ALI++ GR G ++ L +DM + I PS Y +LI+
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 257 GKVDLAMTIFEEM 269
G A+ + ++M
Sbjct: 227 GNWREALEVCKKM 239
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ + +++E+ ++ P + V + ++ A++K Q+ +A IF+ +K C+PD+I Y +L
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ F M+ G+ PD I+ + L+ K + + M E I
Sbjct: 608 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP 667
Query: 206 ------------------------------PDLLTYT-----ALIDSFGRTGNIEESLRL 230
P L + + ++ FG++G +E ++L
Sbjct: 668 FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKL 727
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F + + ++ Y L+++L +G + + E M+ +
Sbjct: 728 FYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGA 769
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 55/305 (18%), Positives = 121/305 (39%), Gaps = 36/305 (11%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVA-SAETNDIDLSFQILKDLLV 61
N I A + A+ L QS+R K + + +L++ S + + LK++
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S L+ + Y++ A+ T+ ++ +I ++ A+ S + K
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN------DMLNE-------------FA 162
A +F ++ +PD I + ++ + G+ + D++ E F+
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 678
Query: 163 ---SMKEAGVVPDFISY-------------NTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
+++E D I N +L+ K +++ + F ++ SG+
Sbjct: 679 ACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGI 738
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
+L TY L++ GN + + + M I+PS +YR +I ++ ++ I
Sbjct: 739 NLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIR 798
Query: 267 EEMNS 271
+++ S
Sbjct: 799 QKLES 803
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 35/272 (12%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
AYN +L + + + Q+L ++ Y+ A+ I ++E+
Sbjct: 294 AYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 353
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
S V +RI+ F + +KA + + +PD YN+++D G+ +
Sbjct: 354 EADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL 413
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES------------ 202
++ F M+E G+ PD +++NTL++ K R D + F EM ES
Sbjct: 414 GHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIM 473
Query: 203 -----------------------GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
G+ P+++TYT L+D +GR+G +E++ MK +
Sbjct: 474 INLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGL 533
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+PS +Y +L++ + G D A+ + + M +
Sbjct: 534 KPSPTMYHALVNAYAQRGLADHALNVVKAMRA 565
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ + K ++ A + D + PD TY++++D R GR M+
Sbjct: 296 NALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA 355
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
GV P ++ +L R REM SG++PD Y +ID+FG+ +
Sbjct: 356 DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGH 415
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ F+ M+++ I P + + +LID K G+ D A+ +F+EM S
Sbjct: 416 AMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRES 461
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
++ +AG +A LL+ + + P++Y + +L + + +F +L+++ S
Sbjct: 334 VDAYTRAGRWESARILLKEMEADGV-KPSSYVFSRILAGFRDRGEWQKAFAVLREMHASG 392
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + + + + ++ N +I A K + ++A+
Sbjct: 393 VRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAI 452
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD ++ C TYNI++++LG R + A MKE G+VP+ I+Y TL++
Sbjct: 453 ELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVY 512
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R + M G+KP Y AL++++ + G + +L + M+ + S
Sbjct: 513 GRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST 572
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMN 270
V SLI+ + ++ A ++ + M
Sbjct: 573 VVLNSLINAFGEDRRIAEAFSVLQFMK 599
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E+ + P N +I + ++ E + +K P++ITY ++D+ G
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R GR + ++ +MK G+ P Y+ L+N + D L + M G++ +
Sbjct: 514 RSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTV 573
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LI++FG I E+ + MK+ +RP + Y +L+ L ++ + + I+EEM
Sbjct: 574 VLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEM 633
Query: 270 NSS 272
+S
Sbjct: 634 ITS 636
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 1/207 (0%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK G A+ L +R+ N L YN ++ E + +L ++
Sbjct: 435 WNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMK 494
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ YT + + + + IE + S + + ++ A+A+ +
Sbjct: 495 EQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLAD 554
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + ++ + + N +++ G R+ + + MKE G+ PD I+Y TL+
Sbjct: 555 HALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLM 614
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPD 207
L ++ + + + + EM SG PD
Sbjct: 615 KALIRVEQFEKVPVIYEEMITSGCAPD 641
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S +V+N +I AF + R+I +A + +K +PD+ITY ++ L RV + + +
Sbjct: 571 STVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIY 630
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRL 189
M +G PD + L + LR ++ +
Sbjct: 631 EEMITSGCAPDRKARAMLRSALRYMKHM 658
>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 557
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N + F K R++++ + I+ + C P++ITY +D L +VG ++ F
Sbjct: 42 LVSFNALFNGFCK-RKMKEEVFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFK 100
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M++ G+VP+ I++ L++ KI LD +++M +S P++ TY ALI+ F + G
Sbjct: 101 EMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRG 160
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E + F M + I P+ VY S+ID K G +D+AM F EM
Sbjct: 161 MLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEM 207
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 96/173 (55%), Gaps = 1/173 (0%)
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
+ S I+ N +I + K Q+E+A L I+ +C+ DL+++N + + + ++ +
Sbjct: 1 MGSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCK-RKMKE 59
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
+ + + +P+ I+Y T ++ L K+ LD +F+EM + GI P+L+ +T LID
Sbjct: 60 EVFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLID 119
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + GN++ + +L+ DM + P++Y Y +LI+ K G ++ A F +M
Sbjct: 120 GYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKM 172
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 33/304 (10%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVS 62
+I+ LCK G++ + + +R I +PN A+ C++ ++ ++D ++Q+ KD+ S
Sbjct: 82 WIDTLCKVGDLDTGYKFFKEMRKDGI-VPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKS 140
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ Y F + F +++++ + V II K I+ A
Sbjct: 141 MHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVA 200
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ F ++ + D++ Y +V+ L GR++ +L M G+ PD + TL++
Sbjct: 201 MKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHA 260
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLT------------------------------YT 212
K +RE+ G +PD +T YT
Sbjct: 261 HFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEKANEVSYT 320
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
ALID + GN++E R+ +M + P +VY S I L + GK+ A + +M
Sbjct: 321 ALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEE 380
Query: 273 LSDL 276
DL
Sbjct: 381 GIDL 384
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD++TYN ++D + G+V + ++ A D +S+N L N K + + IY
Sbjct: 5 PDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEVFIY 64
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
M + + P+++TY ID+ + G+++ + F +M++ I P++ + LID K
Sbjct: 65 MGLMWKCCL-PNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSK 123
Query: 256 MGKVDLAMTIFEEMNSSLS 274
+G +D A ++++M S+
Sbjct: 124 IGNLDFAYQLYKDMCKSMH 142
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 8/266 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I CK G + A + + I +PN+ Y ++ + +ID++ + ++ S
Sbjct: 153 INGFCKRGMLERAEWFFLKMLEVGI-MPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKES 211
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L Y + ++L +E++V+ +V+ ++ A K+ + A
Sbjct: 212 FRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAY 271
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + +PD +T + ++D L + GR +D F K + +SY L++ +
Sbjct: 272 GVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEK-----ANEVSYTALIDGI 326
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K LD EM ESG PD YT+ I R G I E+ ++ N M ++ I +
Sbjct: 327 CKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDL 386
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI L G + A +F++M
Sbjct: 387 LTYSSLIFGLANKGLMIEAKQLFDDM 412
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 109/262 (41%), Gaps = 10/262 (3%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
K GN+ A++ +R ++ L AY V+ +D ++++D++ +
Sbjct: 193 KKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKV 252
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
T A + E++ + ++ +I K + A
Sbjct: 253 VLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDA------- 305
Query: 130 KGLKCK--PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
KG CK + ++Y ++D + + G ++++ M E+G VPD Y + + L +
Sbjct: 306 KGYFCKEKANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQG 365
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
++ +M E GI DLLTY++LI G + E+ +LF+DM ++ I P V+
Sbjct: 366 KIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFD 425
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
LI K + EEM
Sbjct: 426 ILIRGYLKQDNPVAISHLHEEM 447
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGV 248
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 308
Query: 270 N 270
+
Sbjct: 309 S 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 42/270 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ + P+ +YN ++ D+D F++ +L S
Sbjct: 149 MHRFCKDGDIRVAQSVFDAITKWGL-RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ D YT + +I K +++ A
Sbjct: 208 --VQPDVYT---------------------------------YSVLINGLCKESKMDGAN 232
Query: 124 LIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+FD +KGL P+ +T+ ++D + GRV+ + + M ++PD I+YNTL+
Sbjct: 233 ELFDEMLVKGLV--PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L K L EM G+KPD TYT LID + G+++ + M Q+ IR
Sbjct: 291 GLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +LI L + G+ A + EM S
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 61/126 (48%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + +E + F + +L +L K++ L
Sbjct: 69 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 255 KMGKVD 260
++G +D
Sbjct: 189 RLGDLD 194
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 129/266 (48%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ L K G+ A + + D+ I LPN Y+ ++ A + +D + ++ ++ +
Sbjct: 205 IDGLLKGGDPDKAYATYREMLDRRI-LPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNG 263
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T + YT+ F + T+ + F+E++ +++ + + K+ + +A
Sbjct: 264 VTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEAR 323
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IFD + KPD+ TY+ +L G + +M F M ++ + PD +NTL+
Sbjct: 324 KIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYAS 383
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++D ++ F +M + G+KP+ +TY+ LI+ + + +E +L LF +M + P+
Sbjct: 384 AKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNF 443
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++ L + G+ A + ++
Sbjct: 444 ITYNIMLQGLFRTGRTATAKEFYVQI 469
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 74/139 (53%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C P++++Y+ V+D L + G + + M + ++P+ + Y++++ L K + +D
Sbjct: 191 GGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMD 250
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ M ++G+ P+ TYT+L+ F +G + E+++ M + P++ Y S +
Sbjct: 251 KAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFM 310
Query: 251 DNLKKMGKVDLAMTIFEEM 269
D L K G+ A IF+ M
Sbjct: 311 DYLCKNGRCTEARKIFDSM 329
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ C +G ++ A++ L+ + + PN Y+ + + + +I ++
Sbjct: 275 VHGFCSSGQLTEAIKFLEKMCSNGV-EPNVVTYSSFMDYLCKNGRCTEARKIFDSMV--K 331
Query: 64 RTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
R L D Y++ + + ++ + +VQ V N +I+A AK ++++
Sbjct: 332 RGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDE 391
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+L+F ++ KP+ +TY+ +++ ++ R+ + L F M GV P+FI+YN +L
Sbjct: 392 AMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQ 451
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLL 209
L + R ++ ++ +SG K DL+
Sbjct: 452 GLFRTGRTATAKEFYVQIIKSG-KKDLI 478
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 84/171 (49%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + +I K +KA + + + P+++ Y+ ++ L + ++ +
Sbjct: 197 NVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVH 256
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + GV P+ +Y +L++ +L + + +M +G++P+++TY++ +D +
Sbjct: 257 DRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKN 316
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G E+ ++F+ M ++ ++P I Y SL+ G + +F+ M S
Sbjct: 317 GRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQS 367
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL-I 194
P + TY I++ GR++ + + G + I +N LL L +R D + I
Sbjct: 88 PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDI 147
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ--QIRPSIYVYRSLIDN 252
R M E P++ ++T ++ +E+L L + M P++ Y ++ID
Sbjct: 148 VLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDG 207
Query: 253 LKKMGKVDLAMTIFEEM 269
L K G D A + EM
Sbjct: 208 LLKGGDPDKAYATYREM 224
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 96/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++E+V+ + + NR+I ++ ++ + +A+ +F ++ C+PD +TY ++DI
Sbjct: 371 LLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHA 430
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ ++ + M+ AG+ PD +Y+ ++N L K L F EM G P+L+
Sbjct: 431 KAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 490
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+ +I + N E +L+L+ DM+ +P Y +++ L G ++ A +F EM
Sbjct: 491 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 550
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 88/164 (53%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ +++Q + D + CKP+ +TYN ++ GR +N+ +N F M+EAG
Sbjct: 355 MVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAG 414
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K LD+ + ++ M +G+ PD TY+ +I+ G+ G++ +
Sbjct: 415 CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAH 474
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
RLF +M Q P++ + +I K + A+ ++ +M ++
Sbjct: 475 RLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 518
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V Q +P +++ N +I AK+R E AL ++ ++ +PD +TY+IV+++L
Sbjct: 476 LFCEMVGQGCTP-NLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVL 534
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G G + + FA M+ VPD Y L++ K ++ +++EM +G++P++
Sbjct: 535 GHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNV 594
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
T +L+ +F R + E+ L M + PS+ Y L+
Sbjct: 595 PTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 636
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
II K+ + A +F + G C P+L+T+NI++ + + L + M+ AG
Sbjct: 460 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 519
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y+ ++ L L+ F EM PD Y L+D +G+ GN+E++
Sbjct: 520 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAW 579
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + +M +RP++ SL+ ++ ++ A + + M
Sbjct: 580 QWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 620
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 135 KPDLITYNIVLDILGRV---GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDL 191
K D TY ++ LGR G +N +L+E M + G P+ ++YN L+++ + L+
Sbjct: 346 KHDGHTYTTMVGNLGRAKQFGAINRLLDE---MVKDGCKPNTVTYNRLIHSYGRANYLNE 402
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
+ F++M E+G +PD +TY LID + G ++ ++ ++ M+ + P + Y +I+
Sbjct: 403 AMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIIN 462
Query: 252 NLKKMGKVDLAMTIFEEM 269
L K G + A +F EM
Sbjct: 463 CLGKAGHLPAAHRLFCEM 480
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%)
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
++ G D +Y T++ NL + ++ EM + G KP+ +TY LI S+GR +
Sbjct: 341 RQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYL 400
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ +F M++ P Y +LID K G +D+AM +++ M ++
Sbjct: 401 NEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAA 448
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 129/268 (48%), Gaps = 5/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND-IDLSFQILKDLLVSSR 64
+ L KAG + AV++LQ + N V+V S D +D + ++++++L
Sbjct: 156 VHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGM 215
Query: 65 TLSSDCYTNFARAFIMTDDCTQLL-IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y+ + + + + + EV + I+ + +I K+ ++ A+
Sbjct: 216 AANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
IF+ + C P ITYN ++ R G +++ + M + PD I+Y TL++
Sbjct: 276 DIFEE---MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAF 332
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K+ RLD F++M + + PD++T+T+L+D G +E++L L ++ ++ P+I
Sbjct: 333 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 392
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y Y ++D K +V A + + S
Sbjct: 393 YTYNCVVDGYCKSNQVRKAEELVADFRS 420
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+++ + I N +I + ++ +++A+ + + C PD+ITY ++ ++GR++
Sbjct: 280 EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLD 339
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
D F M + PD +++ +L++ L R++ L E+ G P + TY ++
Sbjct: 340 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 399
Query: 216 DSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
D + ++ + ++ L D + + P+ Y L+ + G+ D A+ +++NS
Sbjct: 400 DGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE--- 456
Query: 276 LAGP 279
GP
Sbjct: 457 -GGP 459
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 118/271 (43%), Gaps = 5/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I C+AG++ A+RLL + D N P+ Y ++ A + +D ++++ + ++
Sbjct: 291 NSLIGGYCRAGDMDEAIRLLGKMVDDNC-APDVITYTTLMSAFCKMGRLDDAYELFQQMV 349
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + +T+ L +EE+ + P +I N ++ + KS Q+
Sbjct: 350 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVR 409
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM-KEAGVVPDFIS-YNT 178
KA + + P+ +TYNI++ R GR + L + E G P ++ Y
Sbjct: 410 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 469
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+L+ L + R D + ++ EM + G P T+ ++ + + +++ L +M +
Sbjct: 470 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 529
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P +++ + G + A + E+
Sbjct: 530 HTPGPGTCDAVVSAYCRAGMIQKADELASEL 560
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 121/271 (44%), Gaps = 13/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK + AV LL + F P+ Y+ V+ + + + I +++ +
Sbjct: 226 VDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAP 285
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++ Y + + D + + + ++V +I ++ AF K +++ A
Sbjct: 286 TAIT---YNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAY 342
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + K PD++T+ ++D L GR+ D L + G P +YN +++
Sbjct: 343 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 402
Query: 184 RK---IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ--Q 238
K +R+ + + FR G P+ +TY L+ R G +++L+ + + +
Sbjct: 403 CKSNQVRKAEELVADFR---SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGP 459
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S+ +Y ++D L + G+ D A+ +EEM
Sbjct: 460 CPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I ++ ++ AL ++ + PD +TY ++ L + GR+ D + M
Sbjct: 119 NVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVS 177
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
A VPD + ++ +L R+D EM G+ + +TY+AL+D + ++E
Sbjct: 178 ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDE 237
Query: 227 SLR-LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ L ++ ++ P I Y ++ID L K G++ A+ IFEEM+ +
Sbjct: 238 AVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA 284
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
+++ G+ PD + NT+L L R + F +M E G + TY LI +
Sbjct: 37 IRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARL 95
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
++E++ L DMK + + P ++ +I L + G++ A+ ++ +MN A P DF
Sbjct: 96 LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-----AHPPDF 149
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 129/279 (46%), Gaps = 21/279 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA------YNCVLVASAETNDIDLSFQIL 56
N I LC+ G V AA L+ R+K P A Y+ + A N++D++ ++
Sbjct: 279 NTIIGGLCRVGRVGAA---LEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELF 335
Query: 57 KDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESI------IVVNRII 110
++ + Y F M TQ ++ AS + N +I
Sbjct: 336 HEMADHGHRPDAVMY------FTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILI 389
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
F + +++ +A + + +KG+ +PD+ TYN +L L + G + + M + G
Sbjct: 390 GGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQ 449
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P +++ TL++ K + D L FR M E+ I+P+ + Y LID ++ ++ +++L
Sbjct: 450 PSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKL 509
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F++M+++ + ++ Y +L+ L+ + A + + M
Sbjct: 510 FDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRM 548
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 42/308 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
N ++ LCK G + A+ + + +R + PNA YNC+ A DI ++ +I+ +
Sbjct: 207 NTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARM 266
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPES---IIVVNRIIFAFAKS 116
+ L F E + PE+ + + + AF
Sbjct: 267 EKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREK-RTVWPEARGNAVTYSTLASAFLHC 325
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ A+ +F + +PD + Y ++ L + GR+ D ASMK+AG D +Y
Sbjct: 326 NNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAY 385
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID-------------------- 216
N L+ + ++L EM G++PD+ TY L+
Sbjct: 386 NILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMID 445
Query: 217 --------SFG-------RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDL 261
+FG + G +E+LR+F M + +I+P+ +Y +LID L K +VD+
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDV 505
Query: 262 AMTIFEEM 269
A+ +F+EM
Sbjct: 506 AIKLFDEM 513
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 5/194 (2%)
Query: 90 FIEEVVQIASPES-IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
F+ + + +P I + N ++ A ++ + +F ++ KPD++TY I+L+ L
Sbjct: 117 FLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGL 176
Query: 149 GRVGRVNDMLNEFASMKEAG--VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES--GI 204
+ G V D L M G V PD NT+++ L KI RL +I+ E G
Sbjct: 177 CKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGC 236
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
P+ +TY L D+F R G+I + ++ M+++ + P++ ++I L ++G+V A+
Sbjct: 237 APNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALE 296
Query: 265 IFEEMNSSLSDLAG 278
F E + + G
Sbjct: 297 FFREKRTVWPEARG 310
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 122/280 (43%), Gaps = 48/280 (17%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L +AGN+ L S+RD ++ P+ Y +L ++ + + ++L +
Sbjct: 135 NSLLTALGRAGNLRGMTELFTSMRDASV-KPDVVTYGILLNGLCKSGHVGDALKVLDRMS 193
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ D I ++N ++ K +++
Sbjct: 194 SPGSDVCPD---------------------------------IAILNTVVDGLCKIGRLQ 220
Query: 121 KALLIFD----HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+A++ D H+ G C P+ +TYN + D RVG + A M++ GV P+ I+
Sbjct: 221 QAIIFVDERMRHVHG--CAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITM 278
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPD----LLTYTALIDSFGRTGNIEESLRLFN 232
NT++ L ++ R+ L +FRE + + P+ +TY+ L +F N++ ++ LF+
Sbjct: 279 NTIIGGLCRVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFH 336
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+M RP +Y ++I L + G++ A T M +
Sbjct: 337 EMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKA 376
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 40/307 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
N ++ LCK+G V A+ + Q + + PN YNC++ A +I +++++++ +
Sbjct: 213 NTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKM 272
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE--VVQIASPESIIVVNRIIFAFAKSR 117
+ L F E V + + + ++ A +
Sbjct: 273 ENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTN 332
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ A+ +F PD I Y ++ L + GR+ D + +SMKEAG D +YN
Sbjct: 333 NVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYN 392
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID--------------------- 216
L+ + +RL +EM E GI+PD+ TY L+
Sbjct: 393 ILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDD 452
Query: 217 -------SFG-------RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+FG + G I+E+LR+ M + I P+ +Y +LID L K G VDLA
Sbjct: 453 GCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLA 512
Query: 263 MTIFEEM 269
+ +F+EM
Sbjct: 513 IELFDEM 519
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA------YNCVLVASAETNDIDLSFQIL 56
N + LC+AG AA L+ R+K P Y+ ++ A TN++ ++ ++
Sbjct: 285 NTIVGGLCRAGRTGAA---LEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELF 341
Query: 57 KDLLVSSRTLSSDCY----TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
+ + + + Y + +A + D C+ E ++ + N +I
Sbjct: 342 HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTK----AYNILIAG 397
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
F + +++ +A + +K + +PD+ TYN +L + G + M + G P
Sbjct: 398 FCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPS 457
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I++ TL++ K+ ++D L R M ESGI P+ + Y LID + G+++ ++ LF+
Sbjct: 458 VITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFD 517
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+MK++ + ++ + +L+ L+ + A + ++M
Sbjct: 518 EMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 5/181 (2%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGL-KCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+ N I+ A A+ R + I+ ++G +PD++TY I+++ L + GRV D L
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 162 ASM--KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES--GIKPDLLTYTALIDS 217
M ++ + PD ++ NT+++ L K R+ L + + S G P+ +TY LID+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
F R GNI + L M+ + + +I +++ L + G+ A+ F E + +
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315
Query: 278 G 278
G
Sbjct: 316 G 316
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 172 DFISYNTLLNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
D ++N++L L ++R + + IY G + ++PD++TY L++ + G + ++LR+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194
Query: 231 FNDMKQQ--QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ M +Q IRP + +++D L K G+V A+ E+ SS+
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSV 239
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 19/221 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILK------- 57
I L +AG + A + S+++ L AYN ++ + ++++L+
Sbjct: 360 ISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419
Query: 58 --DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
D+ + LS C A F D+ + +++ S+I ++ + K
Sbjct: 420 RPDVCTYNTLLSGSCK---AGDFAAVDE------LLGKMIDDGCQPSVITFGTLVHGYCK 470
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+I++AL I + P+ + YN ++D L + G V+ + F MKE V + +
Sbjct: 471 VGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTT 530
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
+N LL LR + +M E PD +T L++
Sbjct: 531 FNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + CKAG+ +A LL + D P+ + ++ + ID + +IL+ +
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGC-QPSVITFGTLVHGYCKVGKIDEALRILRSMD 485
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S ++ Y D + +E+ + + P ++ N ++ E
Sbjct: 486 ESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPE 545
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDIL 148
KA + D ++ +C PD +T +++++ L
Sbjct: 546 KAFELMDQMREERCFPDYVTVDVLMEWL 573
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 114/235 (48%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
+Y+ V+ + D+D ++ ++L + + Y + A + + + +
Sbjct: 14 SYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 73
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
V+ + N I+ F S Q ++A++ ++ +PD++TYN ++D L + GR
Sbjct: 74 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 133
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
+ F SM + G+ PD +Y TLL L M +GI P+ ++ L
Sbjct: 134 TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 193
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ ++ + +EE++ +F+ M+QQ + P+ Y ++ID L K G+V+ AM FE+M
Sbjct: 194 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 248
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 120/261 (45%), Gaps = 3/261 (1%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
K G++ + DK I PN YN ++ A + +D + ++L ++ S
Sbjct: 24 KEGDLDKTYSTYNEMLDKRIS-PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDC 82
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y + F + + ++F++++ ++ N ++ K+ + +A IFD
Sbjct: 83 MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 142
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ KPD+ TY +L G + +M M G+ P+ ++ L+ K +
Sbjct: 143 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 202
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
++ ++ F +M + G+ P+ +TY +ID ++G +E+++ F M + +RP VY S
Sbjct: 203 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 262
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
LI +L K + A +F EM
Sbjct: 263 LIHSLCIFDKWEKAEELFLEM 283
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 120/245 (48%), Gaps = 7/245 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + C +G A+ L+ +R + P+ YN ++ + + +I +
Sbjct: 86 NSIVHGFCSSGQPKEAIVFLKKMRSDGV-EPDVVTYNSLMDYLCKNGRCTEARKIFDSM- 143
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ R L D Y + + ++ ++ +V+ + V + ++ A+AK +
Sbjct: 144 -TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 202
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A+L+F ++ P+ +TY V+D+L + GRV D + F M + G+ PD I YN+
Sbjct: 203 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 262
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+++L + + F EM + GI + + ++IDS + G + ES++LF+ M +
Sbjct: 263 LIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIG 322
Query: 239 IRPSI 243
++P I
Sbjct: 323 VKPDI 327
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 86/158 (54%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P ++ + +I F K ++K ++ + + P+++TYN ++ L + V+ +
Sbjct: 9 PPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAME 68
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+M ++GV+PD ++YN++++ + +++ ++M G++PD++TY +L+D
Sbjct: 69 VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC 128
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+ G E+ ++F+ M ++ ++P I Y +L+ G
Sbjct: 129 KNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKG 166
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 75/140 (53%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C PD+++Y+ V++ + G ++ + + M + + P+ ++YN+++ L K + +D
Sbjct: 5 GGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVD 64
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ M +SG+ PD +TY +++ F +G +E++ M+ + P + Y SL+
Sbjct: 65 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 124
Query: 251 DNLKKMGKVDLAMTIFEEMN 270
D L K G+ A IF+ M
Sbjct: 125 DYLCKNGRCTEARKIFDSMT 144
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%)
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD+++Y+ +I+ F + G+++++ +N+M ++I P++ Y S+I L K VD AM +
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 266 FEEMNSS 272
M S
Sbjct: 70 LTTMVKS 76
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 99/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ +M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 23/268 (8%)
Query: 17 AAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+RL QS+ D K P+ ++N ++ + D+D F+ LK+ + +S + D Y
Sbjct: 150 GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFR-LKNAMQAS-GVQPDVY 207
Query: 72 T------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
T + M DD +L +E++ + + +I K+ +++ A+ I
Sbjct: 208 TYSVLINGLCKESKM-DDANELF---DEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ + PDLITYN ++ L + G + D+++E SMK G+ PD I+Y TL++
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMK--GLKPDKITYTTLIDG 320
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
K L+ Y + M + I+ D + YTALI + G ++ ++ +M ++P
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
I Y +I+ K G V + +EM
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + D N +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANELFDEMID-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KP++ TYT +I+ F + G++ +L +M++ PS+
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + ++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL N M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 232
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G +D + M +S
Sbjct: 183 KLGDLDEGFRLKNAMQAS 200
>gi|9755886|emb|CAC01940.1| 67kD chloroplastic RNA-binding protein, P67.1 [Raphanus sativus]
Length = 700
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 96/169 (56%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I A+ ++ +E AL ++D + K + D +T++ ++ I G G + LN +
Sbjct: 244 VTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEE 303
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK GV P+ + YN LL+++ K +R + +++ +G +P+ TY ALI ++GR
Sbjct: 304 MKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARY 363
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++L ++ MK + + ++ +Y +L+ +G VD A IF++M SS
Sbjct: 364 GEDALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMKSS 412
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 120 EKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
E A L+ +++ + LK ++I YN+ + + + + F M + GV PD ++ T
Sbjct: 154 ETAPLVLNNLLETLKPTREVILYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTT 213
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ R+ + +F +M G++PD +T A+ID++GR GN+E +L L++ + ++
Sbjct: 214 LISCARQCGLPKRAVEWFEKMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEK 273
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
R + +LI G D + I+EEM S
Sbjct: 274 WRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKS 306
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
D C L EE+ + ++++ NR++ + K+++ +A +I + +P+ TY
Sbjct: 295 DGC---LNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTY 351
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
++ GR D L + MK G+ I YNTLL+ I +D F++M
Sbjct: 352 AALIRAYGRARYGEDALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMKS 411
Query: 202 SGI-KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
SG +PD T+++LI + G + E+ +M++ P+++V SLI K +VD
Sbjct: 412 SGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVD 471
Query: 261 LAMTIFEEM 269
+ FE++
Sbjct: 472 DVVRTFEQV 480
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A+ ++R E AL+I+ +KG + +I YN +L + +G V++ F MK +G
Sbjct: 354 LIRAYGRARYGEDALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMKSSG 413
Query: 169 VV-PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
PD ++++L+ R+ REM E+G +P L T+LI +G+ +++
Sbjct: 414 TCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDDV 473
Query: 228 LRLFNDMKQQQIRP 241
+R F + + I P
Sbjct: 474 VRTFEQVLELGIEP 487
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 90/190 (47%)
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
MT+ T L+ + + +I+ N + F KS+ +EK+ +FD + KPD
Sbjct: 150 MTNPETAPLVLNNLLETLKPTREVILYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNA 209
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
T+ ++ + G + F M G+ PD ++ +++ + +++ L +
Sbjct: 210 TFTTLISCARQCGLPKRAVEWFEKMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRA 269
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ D +T++ LI +G GN + L ++ +MK ++P++ +Y L+D++ K +
Sbjct: 270 RTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRP 329
Query: 260 DLAMTIFEEM 269
A I +++
Sbjct: 330 WQATMIHKDL 339
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AGN + + + ++ + PN YN +L + + + I KDL+ + +
Sbjct: 291 AGNYDGCLNIYEEMKSLGV-KPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWS 349
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y RA+ L+ ++ ++I+ N ++ A +++A IF +
Sbjct: 350 TYAALIRAYGRARYGEDALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDM 409
Query: 130 KGL-KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
K C+PD T++ ++ + GRV++ M+EAG P +L+ K ++
Sbjct: 410 KSSGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQ 469
Query: 189 LDLCLIYFREMGESGIKPD 207
+D + F ++ E GI+PD
Sbjct: 470 VDDVVRTFEQVLELGIEPD 488
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 104/191 (54%)
Query: 79 IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDL 138
I ++ + F E+++ P + N +I F K I A LIF+ I+ +P
Sbjct: 199 INSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTT 258
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+++N +++ L + +++ +M+E + PD +Y+ L++ L K RLD+ F E
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDE 318
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M + G++P+ +T+TALID R+ ++ ++ ++ M ++P + +Y +L++ L K+G
Sbjct: 319 MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 259 VDLAMTIFEEM 269
V+ A + +EM
Sbjct: 379 VNKARKLVDEM 389
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK+ N+ RL +++ + I+ P+ Y+ ++ + +D++ Q+ ++
Sbjct: 262 NTLINGLCKSRNLDEGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ 320
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +T + + +++ + +++ N ++ K +
Sbjct: 321 QRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN 380
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA + D +K + KPD ITY ++D + G + + M E GVV D +++ L+
Sbjct: 381 KARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALI 440
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + R+ REM E+G+KPD TYT +ID + + GN++ +L +M+ +
Sbjct: 441 SGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHK 500
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y L++ L K G++ A + E M
Sbjct: 501 PGVITYNVLMNGLCKQGQMKNANMLLEAM 529
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN +L + D++ + +++ ++ + YT + D + E+
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAM----EIR 421
Query: 96 QIASPESIIVVN----RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+ + E +++ N +I F + ++ A + KPD TY +V+D +
Sbjct: 422 KGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKK 481
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G V M+ G P I+YN L+N L K ++ + M G+ PD +TY
Sbjct: 482 GNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITY 541
Query: 212 TALIDSFGRTGNIEESLRLFND 233
L++ + G E+ L+L N+
Sbjct: 542 NILLEGHCKNGKAEDLLKLRNE 563
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 96/223 (43%), Gaps = 6/223 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
M N + LCK G+V+ A +L+ ++ + P+ Y ++ + D++ + +I K
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMVGM-KPDKITYTTLIDGYCKEGDLESAMEIRKG 423
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ L + +T F + E+V+ +I + K
Sbjct: 424 MNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGN 483
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ + ++ KP +ITYN++++ L + G++ + +M GV PD I+YN
Sbjct: 484 VKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNI 543
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
LL K + + L + E G+ D YT+L+ + ++
Sbjct: 544 LLEGHCKNGKAEDLL---KLRNEKGLIVDYAYYTSLVSEYNKS 583
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 35/264 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I + +AG S AV + D YNC ++F IL +L R
Sbjct: 184 IRRYVRAGLASEAVHAFNRMED--------YNC--------KPDKIAFSILISILCRKR- 226
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
RA T+ F + + P+ I+ N ++ + ++ I +A +
Sbjct: 227 ----------RA-------TEAQSFFDSLKDKFEPDVIVYTN-LVRGWCRAGNIPEAERV 268
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
F +K C P++ TY IV+D L R G++ + FA M + G P+ I++N LL K
Sbjct: 269 FTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVK 328
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
R + L + +M G PD +TY LI+S + GN++E+L++ N M ++ P+
Sbjct: 329 AGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNAST 388
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
+ L ++ K+ V+ A ++ +M
Sbjct: 389 FNGLFGSIAKLRDVNGAHRLYAKM 412
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 120/257 (46%), Gaps = 4/257 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+ C+AGN+ A R+ ++ +PN Y +V A I + + ++L
Sbjct: 253 VRGWCRAGNIPEAERVFTEMKVAGC-MPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVG 311
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+S + N R + ++L ++ ++ P + N +I + K +++AL
Sbjct: 312 CEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEAL 371
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + C P+ T+N + + ++ VN +A MKE + ++YN L+
Sbjct: 372 KVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMF 431
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ-IRPS 242
+ D+ L +EM E ++P++ TY LI + G+ + + F +M +++ ++PS
Sbjct: 432 VDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPS 491
Query: 243 IYVYRSLIDNLKKMGKV 259
+ VY ++ L+K G++
Sbjct: 492 LPVYEKVLQQLRKAGQL 508
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LC+ + A SL+DK F P+ Y ++ +I + ++ ++ V+
Sbjct: 219 ISILCRKRRATEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAG 276
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT A T+ E++ + + I N ++ K+ + EK L
Sbjct: 277 CMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVL 336
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+++ +K + C PD +TYN +++ + G +++ L SM + G P+ ++N L ++
Sbjct: 337 QVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSI 396
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K+R ++ + +M E K + +TY L+ F T + + L+L +M + + P++
Sbjct: 397 AKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNV 456
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y LI MG + A F EM
Sbjct: 457 NTYCVLIAMYCGMGHWNNAYKFFREM 482
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I K R + + D +K + + T++I++ R G ++ ++ F M++
Sbjct: 146 NEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMED 205
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
PD I+++ L++ L + RR +F + + +PD++ YT L+ + R GNI E
Sbjct: 206 YNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIPE 264
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ R+F +MK P++Y Y +ID L + G++ A +F EM
Sbjct: 265 AERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEM 307
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI + +I + ++ +A+ F+ ++ CKPD I ++I++ IL R R + + F
Sbjct: 176 SIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFF 235
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
S+K+ PD I Y L+ + + F EM +G P++ TYT +ID+ R
Sbjct: 236 DSLKDK-FEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRC 294
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G I + +F +M P+ + +L+ K G+ + + ++ +M
Sbjct: 295 GQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQM 342
>gi|9755888|emb|CAC01941.1| RSP67.2 [Raphanus sativus]
Length = 700
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 96/169 (56%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ + +I A+ ++ +E AL ++D + K + D +T++ ++ I G G + LN +
Sbjct: 244 VTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEE 303
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
MK GV P+ + YN LL+++ K +R + +++ +G +P+ TY ALI ++GR
Sbjct: 304 MKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARY 363
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++L ++ MK + + ++ +Y +L+ +G VD A IF++M SS
Sbjct: 364 GEDALVIYRQMKGKGMELTVLLYNTLLSMCADIGYVDEAFEIFQDMKSS 412
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 82 DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY 141
D C L EE+ + ++++ NR++ + K+++ +A +I + +P+ TY
Sbjct: 295 DGC---LNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTY 351
Query: 142 NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGE 201
++ GR D L + MK G+ + YNTLL+ I +D F++M
Sbjct: 352 AALIRAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLSMCADIGYVDEAFEIFQDMKS 411
Query: 202 SGI-KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
SG +PD T+++LI + G + E+ +M++ P+++V SLI K +VD
Sbjct: 412 SGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVD 471
Query: 261 LAMTIFEEM 269
+ FE++
Sbjct: 472 DVVRTFEQV 480
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 91/190 (47%)
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
MT+ T L+ + + +I+ N + F KS+ +EK+ +FD + KPD
Sbjct: 150 MTNPETAPLVLNNLLETLKPTREVILYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNA 209
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
T+ ++ + G N + F M G+ PD ++ +++ + +++ L +
Sbjct: 210 TFTTLISCARQCGLPNRAVEWFEKMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRA 269
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ D +T++ LI +G GN + L ++ +MK ++P++ +Y L+D++ K +
Sbjct: 270 RTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRP 329
Query: 260 DLAMTIFEEM 269
A I +++
Sbjct: 330 WQATMIHKDL 339
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I A+ ++R E AL+I+ +KG + ++ YN +L + +G V++ F MK +G
Sbjct: 354 LIRAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLSMCADIGYVDEAFEIFQDMKSSG 413
Query: 169 VV-PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
PD ++++L+ R+ REM E+G +P L T+LI +G+ +++
Sbjct: 414 TCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDDV 473
Query: 228 LRLFNDMKQQQIRP 241
+R F + + I P
Sbjct: 474 VRTFEQVLELGIEP 487
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AGN + + + ++ + PN YN +L + + + I KDL+ + +
Sbjct: 291 AGNYDGCLNIYEEMKSLGV-KPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWS 349
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y RA+ L+ ++ ++++ N ++ A +++A IF +
Sbjct: 350 TYAALIRAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLSMCADIGYVDEAFEIFQDM 409
Query: 130 KGL-KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
K C+PD T++ ++ + GRV++ M+EAG P +L+ K ++
Sbjct: 410 KSSGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQ 469
Query: 189 LDLCLIYFREMGESGIKPD 207
+D + F ++ E GI+PD
Sbjct: 470 VDDVVRTFEQVLELGIEPD 488
>gi|224576655|gb|ACN57001.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ + +F+++ KP++ Y +++D + G V D + M + G PD ++Y+
Sbjct: 2 KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N L K R++ L YF+ +G + + Y++LID G+ G I+E+ RLF +M ++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y +LID L K GKVD AMT+F+ M
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 153
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 99/179 (55%), Gaps = 1/179 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 11 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 70
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 71 GRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 130
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ALID+ + G ++E++ LF M++++ ++Y Y LI + K + + A+ +++ M
Sbjct: 131 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMM 189
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 92/246 (37%), Gaps = 72/246 (29%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K+G+V A+RLL + D+ F P+ Y+ V+ + ++ + + +
Sbjct: 29 IDGYAKSGSVEDAIRLLHRMIDEG-FKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNG 87
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++S Y++ +I K+ +I++A
Sbjct: 88 XAINSMFYSS-----------------------------------LIDGLGKAGRIDEAE 112
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + C D YN ++D L + G+V++ + F M+E
Sbjct: 113 RLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE----------------- 155
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
E G + TYT LI + EE+L+L++ M + I P+
Sbjct: 156 -----------------EEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGITPTA 198
Query: 244 YVYRSL 249
+R+L
Sbjct: 199 ACFRAL 204
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 98/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +N+ +M+ +GV PD +Y+ L+N L K +LD F EM ++G+ P+ +
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + EM
Sbjct: 243 SFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L +NI++ + G + + F ++ + G+ P +S+NTL+N K+ L+
Sbjct: 136 LYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG++PD+ TY+ LI+ + ++++ LF++M + P+ + +LID K G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDG 255
Query: 258 KVDLAMTIFEEM-NSSLS 274
+VDLAM I+++M + SLS
Sbjct: 256 RVDLAMEIYKQMLSQSLS 273
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 128/278 (46%), Gaps = 25/278 (8%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ CK G + RL QS+ D K P+ ++N ++ + D++ F+ LK+ +
Sbjct: 143 MHSFCKEGEI----RLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFR-LKNAM 197
Query: 61 VSSRTLSSDCYT-----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+S + D YT N DD +L F E + P S+ +I K
Sbjct: 198 QAS-GVQPDVYTYSVLINGLCKESKLDDANEL--FDEMLDNGLVPNSVSFTT-LIDGHCK 253
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPD 172
+++ A+ I+ + PDLITYN ++ L G + + D++NE SMK G+ PD
Sbjct: 254 DGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM-SMK--GLKPD 310
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+Y TL++ K L+ Y + M + I+ D + YTALI + G ++ ++
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+M ++P I Y +I+ K G V + +EM
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +++ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--IDLSFQILKDLLVSS 63
I LCK + A L + D N +PN+ + + D +DL+ +I K +L S
Sbjct: 213 INGLCKESKLDDANELFDEMLD-NGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K+ +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKNGDLKQAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KP++ TYT +I+ F + G++ +L +M++ PS+
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + G++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ E RL N M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEM 232
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G ++ + M +S
Sbjct: 183 KLGDLNEGFRLKNAMQAS 200
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
C+ I + G ++ A L+ + P YN +L + + ILK++
Sbjct: 306 CSTVISACGREGLINEAKEFFVELKSSG-YEPGTVTYNALLQVFGKAGIYSEALNILKEM 364
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ TL S Y A++ + I+ + + + + +I A+ ++ +
Sbjct: 365 EDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKE 424
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
KAL +F+ +K C P++ TYN +L +LG+ R +M+ + M+ G P+ I++NTL
Sbjct: 425 VKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTL 484
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + FREM G +P T+ LI ++GR G+ ++ +++++M +
Sbjct: 485 LAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGF 544
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P Y +L++ L + G A ++ +M
Sbjct: 545 TPCATTYNALLNALARRGDWKAAESVLLDM 574
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 36/200 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR--------VNDMLNE 160
I+ A++++ + ++A+ +F+ +K P L+TYN++LD+ G++GR +++M NE
Sbjct: 238 ILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNE 297
Query: 161 ----------------------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
F +K +G P ++YN LL K
Sbjct: 298 GLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEA 357
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L +EM ++ D +TY L+ ++ R G EE + + M ++ + P+ Y ++I+
Sbjct: 358 LNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINA 417
Query: 253 LKKMGKVDLAMTIFEEMNSS 272
+ GK A+ +F +M S
Sbjct: 418 YGRAGKEVKALQLFNQMKKS 437
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 29/276 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDL- 59
N + L + G+ AA +L +R+K F PN +++ +L A+ ++ +I KD+
Sbjct: 552 NALLNALARRGDWKAAESVLLDMRNKG-FKPNETSFSLMLHCYAKGGNVRGLERIGKDIY 610
Query: 60 -------LVSSRTL-----SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVN 107
V RTL RAF EE+++ +++ N
Sbjct: 611 DGQIFPSWVLLRTLILANFKCRAVRGMERAF-------------EELMKNGYKPDMVIFN 657
Query: 108 RIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
++ FAK+ E+A + D I+ +PDL+TYN ++++ R G + ++
Sbjct: 658 SMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKS 717
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G PD +SYNT++ + + + EM GI P + TY + + G E
Sbjct: 718 GESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEV 777
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
+ + M Q+ +P+ Y+ ++D K K AM
Sbjct: 778 DEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAM 813
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V +I + + AL + D I K D+ +L R G+ + F M
Sbjct: 199 AVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERM 258
Query: 165 KEAGVVPDFISYNTLLNNLRKI-RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
K+ G+ P ++YN +L+ K+ R D L EM G++ D T + +I + GR G
Sbjct: 259 KDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGL 318
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I E+ F ++K P Y +L+ K G A+ I +EM
Sbjct: 319 INEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEM 364
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLL-----NNL--RKIRRLDLCLIYFREMGESGIKP 206
V M F + + G PD + +N++L NN+ R + LDL + ESG++P
Sbjct: 634 VRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDL-------IRESGLQP 686
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
DL+TY +L++ + R G ++ + + + P + Y ++I + G + A+ +
Sbjct: 687 DLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVM 746
Query: 267 EEMNS 271
EM +
Sbjct: 747 SEMTT 751
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP-DFISYNTLLNNL 183
+FD +K + D+++ LD+LG+ R + S +G V D + ++ L
Sbjct: 148 LFDSVKSELLEVDIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVKLDSKAVELMIRIL 207
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ + + L ++ D+ T ++ ++ R G ++++ +F MK + PS+
Sbjct: 208 GRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSL 267
Query: 244 YVYRSLIDNLKKMGK-VDLAMTIFEEM 269
Y ++D KMG+ D + + +EM
Sbjct: 268 VTYNVMLDVYGKMGRSWDKILDLLDEM 294
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 89/157 (56%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K +++ AL ++ + C P+L+TYN ++D+ G+ G + + +++ G+ P+
Sbjct: 242 KGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIR 301
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+YNT++ + L + M +G +P TYTALI ++G+ G ++ +L++F DM
Sbjct: 302 TYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDM 361
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
++ ++ Y SLI +K G+ +LA+ +F EM++
Sbjct: 362 VRRGCERNVITYSSLISACEKAGRWELALELFREMHT 398
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 18 AVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFAR 76
A+ L+ +R + I + Y+ ++ + N++DL+ + + +L T + Y
Sbjct: 214 ALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLID 273
Query: 77 AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP 136
+ T + + ++ + + I N +I A S Q ++AL I++ + +P
Sbjct: 274 VYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQP 333
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
TY ++ G+ G+++ L F M G + I+Y++L++ K R +L L F
Sbjct: 334 TATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELF 393
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
REM G +P+++TY +LI + + E++ +F M+ + +P + LI +
Sbjct: 394 REMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRA 453
Query: 257 GKVDLAMTIFEEMNS 271
G A+T FE+M +
Sbjct: 454 GHWRRALTAFEQMKA 468
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Query: 115 KSRQIEKALLIFDHIKGLKCKPDL------ITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
KS + +A +FD ++GL DL +TY ++ G ++ L A M+ G
Sbjct: 166 KSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSRG 225
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ + +Y+ L+N K LDL L +R+M G P+L+TY LID +G+TG EE++
Sbjct: 226 IQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAI 285
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
R+ + +++Q I P I Y ++I G+ A+ I+E M
Sbjct: 286 RVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERM 326
Score = 83.6 bits (205), Expect = 8e-14, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 2/229 (0%)
Query: 33 PN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIF 90
PN YN ++ +T + + ++L L Y A M+ + L
Sbjct: 263 PNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRI 322
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
E ++ + + +I A+ K+ Q+++AL IF + C+ ++ITY+ ++ +
Sbjct: 323 YERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEK 382
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
GR L F M G P+ ++YN+L+ + + + F +M G KPD +T
Sbjct: 383 AGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVT 442
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ LI ++ R G+ +L F MK RP VY +++ L K G V
Sbjct: 443 FGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTGLV 491
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 97/221 (43%), Gaps = 1/221 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ K G A+R+L +L + I YN V++A + + +I + +L
Sbjct: 269 NTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLA 328
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ ++ YT A+ + L +++V+ ++I + +I A K+ + E
Sbjct: 329 AGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWEL 388
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
AL +F + C+P+++TYN ++ + + F M+ G PD +++ L+
Sbjct: 389 ALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIA 448
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ L F +M +PD + Y ++ + +TG
Sbjct: 449 AYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTG 489
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S++ N ++ A K + ++ + K P+LIT+N V++ L +VG++N +
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL---IYFREMGESGIKPDLLTYTALIDSF 218
MK G P+ ++YNTL++ K+ R+ +EM E+ + P+ +T+ LID F
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ N+ +L++F +M+ Q ++P++ Y SL++ L GK++ A + +EM SS
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSS 367
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
++ E + + SP ++I N +I K ++ KA + D +K P+++TYN ++D
Sbjct: 216 FVYKEMIRRKISP-NLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDG 274
Query: 148 LGRVGRVNDMLNEFASMKEA---GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
++GRV M A +KE V P+ +++N L++ K L L F EM G+
Sbjct: 275 YCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGL 334
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
KP ++TY +L++ G + E+ L ++M ++P++ Y +LI+ K ++ A
Sbjct: 335 KPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARE 394
Query: 265 IFEEM 269
+F+ +
Sbjct: 395 LFDNI 399
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
I E V SP S+ N +I F K + AL +F+ ++ KP ++TYN +++ L
Sbjct: 290 ILKEMVENKVSPNSV-TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGL 348
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G++N+ M + + P+ I+YN L+N K + L+ F +G+ G+ P++
Sbjct: 349 CNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNV 408
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+T+ L+ + + G +EE+ L M ++ P+ Y LI + GK++ + E
Sbjct: 409 ITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNE 468
Query: 269 M 269
M
Sbjct: 469 M 469
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 124/271 (45%), Gaps = 4/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRD--KNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
N I+ CK G V + L++ +N PN+ +N ++ + ++ + ++ ++
Sbjct: 269 NTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEE 328
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + Y + + + ++E++ ++I N +I + K +
Sbjct: 329 MQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E+A +FD+I P++IT+N +L + G++ + M E G +P+ +YN
Sbjct: 389 LEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + +++ EM G+K D +TY LI ++ +++ RL ++M +
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++PS Y L++ G + A+ + ++M
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQM 539
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK N+SAA+++ + ++ + + P YN ++ ++ + +L ++L
Sbjct: 307 NVLIDGFCKDENLSAALKVFEEMQSQGL-KPTVVTYNSLVNGLCNEGKLNEAKVLLDEML 365
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S+ + Y + + + + + ++I N ++ + K ++E
Sbjct: 366 SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKME 425
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A L+ + P+ TYN ++ R G++ ++ N M+ GV D ++YN L+
Sbjct: 426 EAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILI 485
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ + + EM + G+KP LTY L++ + GN+ +L L M+++
Sbjct: 486 SAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRW 545
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y LI + GK++ A + EM
Sbjct: 546 ANVVTYNVLIQGYCRKGKLEDANGLLNEM 574
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
I+ + ++ A+ ++ + L F + K +++ N +L L + + +
Sbjct: 161 IIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKE 220
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF---GR 220
M + P+ I++NT++N L K+ +L+ +M G P+++TY LID + GR
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
G + ++ + +M + ++ P+ + LID K + A+ +FEEM S
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQS 331
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 108/257 (42%), Gaps = 3/257 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + LC G ++ A LL + N+ PN YN ++ + ++ + ++ ++
Sbjct: 342 NSLVNGLCNEGKLNEAKVLLDEMLSSNL-KPNVITYNALINGYCKKKLLEEARELFDNIG 400
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
T + + + + + + +++ + N +I F + ++E
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ + + ++ K D +TYNI++ M + G+ P ++YN LL
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILL 520
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L L ++M + G +++TY LI + R G +E++ L N+M ++ +
Sbjct: 521 NGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLI 580
Query: 241 PSIYVYRSLIDNLKKMG 257
P+ Y + + + + G
Sbjct: 581 PNRTTYEIIKEEMMEKG 597
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I + G + A++LL ++ +I PN Y+ ++V E ++ + +L ++
Sbjct: 598 NTMIAAQSREGKTAKALKLLNGMKRSSI-KPNLITYSTLIVGLFEAGAVEKAKYLLNEMS 656
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S + +S + +A +L E ++ I V N ++ +
Sbjct: 657 SSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTR 716
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILG--RVGRVNDMLNEFASMKEAGVVPDFISYNT 178
KA+++ + + G PD IT+N + ILG + G +++ + + M G+ P+ ++NT
Sbjct: 717 KAMVVLEEMSGRGIAPDTITFNAL--ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNT 774
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
LL L R+ + EM + GI+P LTY L+ +G+ N E++RL+ +M +
Sbjct: 775 LLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKG 834
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P + Y +LI + K+G + A +F EM +
Sbjct: 835 FLPKVSTYNALISDFSKVGMMSQAKELFNEMQN 867
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQ------ 54
N + LC+AG V AA ++ +++ + PN Y +V N +D +F
Sbjct: 213 NSLVAGLCRAGEVDAARDMVDTMKRDGVE-PNVVTYTMFIVEYCRRNAVDDAFSLYEEMV 271
Query: 55 ---ILKDLLVSSRTLSSDCYTN-FARAFIMTDDCTQL----------------------- 87
+L D++ S + C F+ A+ + + ++
Sbjct: 272 RKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGN 331
Query: 88 --LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
L + EVV +I+ ++ K +I++A +F H P+ +TY +++
Sbjct: 332 ESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLI 391
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
D L + G V+ + M+E + P+ +++++++N L K + Y REM E GI
Sbjct: 392 DALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGID 451
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+++TY +ID + E +L ++++M + + + ++ SL++ LKK GK++ A +
Sbjct: 452 PNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEAL 511
Query: 266 FEEMN 270
F EMN
Sbjct: 512 FREMN 516
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 9/272 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCKAGNV A ++L + +K+I PN ++ ++ + + + ++++
Sbjct: 391 IDALCKAGNVDGAEQVLSEMEEKSIS-PNVVTFSSIINGLVKRGWVGKATDYMREM--KE 447
Query: 64 RTLSSDCYTNFA---RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
R + + T +F L ++ E + + IV + ++ K+ +IE
Sbjct: 448 RGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIV-DSLVNGLKKNGKIE 506
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KA +F + D + Y ++D L + G + + E ++PD + YN +
Sbjct: 507 KAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFI 566
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L + + + EM +G+KPD +TY +I + R G ++L+L N MK+ I+
Sbjct: 567 NCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIK 626
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++ Y +LI L + G V+ A + EM+SS
Sbjct: 627 PNLITYSTLIVGLFEAGAVEKAKYLLNEMSSS 658
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 126/300 (42%), Gaps = 36/300 (12%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ L K G + A L + + ++ + L + Y ++ +T ++ +F++ ++L +
Sbjct: 496 VNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y F M + F+EE+ + N +I A ++ + KAL
Sbjct: 556 LPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALK 615
Query: 125 IFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFAS------------------ 163
+ + +K KP+LITY+ ++ L G V + +LNE +S
Sbjct: 616 LLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACS 675
Query: 164 --------------MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
M AG+ D YNTL+ L ++ EM GI PD +
Sbjct: 676 QGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTI 735
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+ ALI ++G+++ + ++ M I P++ + +L+ L+ G++ + + EM
Sbjct: 736 TFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEM 795
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ ++ +++ A + D +K +P+++TY + + R V+D + +
Sbjct: 209 VVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYE 268
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M GV+PD ++ + L+ L K R FREM + G P+ +TY LID+ +
Sbjct: 269 EMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQ 328
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
ESL L ++ + + + +Y +L+D L K GK+D A +F +LSD P
Sbjct: 329 RGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRH---ALSDNHTP 382
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ L KA + ++ LL + + + + Y ++ + ID + + + L +
Sbjct: 321 IDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNH 380
Query: 65 TLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T + YT A D Q+L +EE + SP +++ + II K + K
Sbjct: 381 TPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE--KSISP-NVVTFSSIINGLVKRGWVGK 437
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A +K P+++TY V+D + L+ + M GV + ++L+N
Sbjct: 438 ATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVN 497
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L+K +++ FREM E G+ D + YT LID +TGN+ + ++ ++ ++ + P
Sbjct: 498 GLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLP 557
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
VY I+ L +GK A + EEM S+
Sbjct: 558 DAVVYNVFINCLCMLGKSKEAESFLEEMQST 588
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
++ N ++ + K +E A + + +K D++ YN ++ L R G V+ +
Sbjct: 174 VVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVD 233
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+MK GV P+ ++Y + + +D + EM G+ PD++T +AL+ + G
Sbjct: 234 TMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDG 293
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
E+ LF +M++ P+ Y LID L K + + ++++ E+ S
Sbjct: 294 RFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVS 342
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 16/189 (8%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD------HIKGLKCKPDLITYNI 143
+ E+ + P + VN ++ + ++++A + + I GL D++ +N
Sbjct: 124 LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGL----DVVGWNS 179
Query: 144 VLDILGRVGRVNDMLNEFA---SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
++D +VG DM FA MK GV D + YN+L+ L + +D M
Sbjct: 180 LVDGYCKVG---DMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMK 236
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
G++P+++TYT I + R ++++ L+ +M ++ + P + +L+ L K G+
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFS 296
Query: 261 LAMTIFEEM 269
A +F EM
Sbjct: 297 EAYALFREM 305
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 107/289 (37%), Gaps = 38/289 (13%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I L +AG V A LL + F P + + VL A ++ DL +I + ++ +
Sbjct: 636 IVGLFEAGAVEKAKYLLNEMSSSG-FSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAG 694
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y R + ++ +EE+ I N +I KS ++ A
Sbjct: 695 LCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAF 754
Query: 124 LIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNE-------------------- 160
+D + P++ T+N +L L GR+G + +LNE
Sbjct: 755 STYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGY 814
Query: 161 ------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ M G +P +YN L+++ K+ + F EM G+ P
Sbjct: 815 GKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTS 874
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
TY L+ + + N E + DMK++ PS S+ K G
Sbjct: 875 CTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPG 923
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
KS++ E L + ++ KPD +TYN ++ R G+ L MK + + P+
Sbjct: 572 LGKSKEAESFL---EEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPN 628
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I+Y+TL+ L + ++ EM SG P LT+ ++ + + + L +
Sbjct: 629 LITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHE 688
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M + I VY +L+ L G AM + EEM+
Sbjct: 689 WMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSG 727
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 100/234 (42%), Gaps = 3/234 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LC G A+ +L+ + + I P+ +N +++ ++ +D +F +L
Sbjct: 703 NTLVRVLCYNGMTRKAMVVLEEMSGRGI-APDTITFNALILGHFKSGHLDNAFSTYDQML 761
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + + + + E+ + S + + ++ + K
Sbjct: 762 YHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKV 821
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ ++ + G P + TYN ++ +VG ++ F M+ GV+P +Y+ L+
Sbjct: 822 EAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILV 881
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+ K+R + ++M E G P T +++ +F + G E+ RL ++
Sbjct: 882 SGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 40/307 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
N ++ LCK+G V A+ + Q + + PN YNC++ A +I +++++++ +
Sbjct: 213 NTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKM 272
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE--VVQIASPESIIVVNRIIFAFAKSR 117
+ L F E V + + + ++ A +
Sbjct: 273 ENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTN 332
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ A+ +F PD I Y ++ L + GR+ D + +SMKEAG D +YN
Sbjct: 333 NVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYN 392
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID--------------------- 216
L+ + +RL +EM E GI+PD+ TY L+
Sbjct: 393 ILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDD 452
Query: 217 -------SFG-------RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+FG + G I+E+LR+ M + I P+ +Y +LID L K G VDLA
Sbjct: 453 GCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLA 512
Query: 263 MTIFEEM 269
+ +F+EM
Sbjct: 513 IELFDEM 519
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA------YNCVLVASAETNDIDLSFQIL 56
N + LC+AG AA L+ R+K P Y+ ++ A TN++ ++ ++
Sbjct: 285 NTIVGGLCRAGRTGAA---LEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELF 341
Query: 57 KDLLVSSRTLSSDCY----TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
+ + + + Y + +A + D C+ E ++ + N +I
Sbjct: 342 HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTK----AYNILIAG 397
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
F + +++ +A + +K + +PD+ TYN +L + G + M + G P
Sbjct: 398 FCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPS 457
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I++ TL++ K+ ++D L R M ESGI P+ + Y LID + G+++ ++ LF+
Sbjct: 458 VITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFD 517
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+MK++ + ++ + +L+ L+ + A + ++M
Sbjct: 518 EMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 5/181 (2%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGL-KCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+ N I+ A A+ R + I+ ++G +PD++TY I+++ L + GRV D L
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 162 ASM--KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES--GIKPDLLTYTALIDS 217
M ++ + PD ++ NT+++ L K R+ L + + S G P+ +TY LID+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
F R GNI + L M+ + + +I +++ L + G+ A+ F E + +
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315
Query: 278 G 278
G
Sbjct: 316 G 316
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 172 DFISYNTLLNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
D ++N++L L ++R + + IY G + ++PD++TY L++ + G + ++LR+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194
Query: 231 FNDMKQQ--QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ M +Q IRP + +++D L K G+V A+ E+ SS+
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSV 239
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILK------- 57
I L +AG + A + S+++ L AYN ++ + ++++L+
Sbjct: 360 ISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419
Query: 58 --DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
D+ + LS C A F D+ + +++ S+I ++ + K
Sbjct: 420 RPDVCTYNTLLSGSCK---AGDFAAVDE------LLGKMIDDGCQPSVITFGTLVHGYCK 470
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+I++AL I + P+ + YN ++D L + G V+ + F MKE V + +
Sbjct: 471 VGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTT 530
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+N LL LR + +M E PD +T L++ G E+ RL M+
Sbjct: 531 FNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIG---ETDRLKRFMQ 587
Query: 236 QQQ 238
Q +
Sbjct: 588 QGE 590
>gi|357480587|ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511634|gb|AES92776.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 706
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT-----NFARAFIMTDDCTQLLIF 90
YN L + D+D + ++ ++L R + D T + AR+ + D + +
Sbjct: 184 YNVTLKVFRKCKDLDGAEKVFGEML--QRGVKPDNVTFSTIISCARSCYLPDKAVE---W 238
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
E++ + + +I ++ K+ I+ AL ++D + K + + T++ ++ + G
Sbjct: 239 FEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGV 298
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + LN + MK GV P+ + YNTLL+ + + +R ++EM + I P+ T
Sbjct: 299 AGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRAT 358
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +L+ ++GR E++L ++ +M+++++ + ++Y SL+ +G DLA IFE+M
Sbjct: 359 YASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFEIFEDMK 418
Query: 271 SSLSDLAGPKDF 282
S SD P +
Sbjct: 419 S--SDTCSPDSW 428
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 74/135 (54%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
++I YN+ L + + ++ F M + GV PD ++++T+++ R D + +F
Sbjct: 180 EVILYNVTLKVFRKCKDLDGAEKVFGEMLQRGVKPDNVTFSTIISCARSCYLPDKAVEWF 239
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
+M G +PD +TY+ +IDS+G+ G+I+ +L L++ + ++ R + +LI
Sbjct: 240 EKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVA 299
Query: 257 GKVDLAMTIFEEMNS 271
G D + ++EEM +
Sbjct: 300 GNYDGCLNVYEEMKA 314
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 104/236 (44%), Gaps = 1/236 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
Y+ ++ + + DID++ + + ++ + + + + L EE+
Sbjct: 253 TYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEM 312
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+ +++V N ++ A ++++ +A I+ + P+ TY +L GR
Sbjct: 313 KALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFC 372
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI-KPDLLTYTA 213
D L + M+E + + YN+LL + DL F +M S PD T+++
Sbjct: 373 EDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFEIFEDMKSSDTCSPDSWTFSS 432
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI + +G + E+ R+ N+M + P+I+V SL+ K + D + F ++
Sbjct: 433 LITIYSCSGRVSEAERMMNEMIESGFEPTIFVLTSLVQCYGKAKRTDDVVKTFNQL 488
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 11/189 (5%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A+ ++R E AL+++ ++ + + YN +L + VG + F MK +
Sbjct: 362 LLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFEIFEDMKSSD 421
Query: 169 VV-PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
PD ++++L+ R+ EM ESG +P + T+L+ +G+ ++
Sbjct: 422 TCSPDSWTFSSLITIYSCSGRVSEAERMMNEMIESGFEPTIFVLTSLVQCYGKAKRTDDV 481
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI--FEEMNSSLS--------DLA 277
++ FN + I P L++ + + K +L I E+ N LS L
Sbjct: 482 VKTFNQLLDMGIEPDDRFCGCLLNVMTQTPKEELGKLIDCVEKANPKLSFVVRYLVEGLE 541
Query: 278 GPKDFKRKA 286
G +F+++A
Sbjct: 542 GDGEFRKEA 550
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 12/253 (4%)
Query: 12 AGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AGN + + + ++ + PN YN +L A + I K+++ + +
Sbjct: 299 AGNYDGCLNVYEEMKALGV-KPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRA 357
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
Y + A+ C L+ E+ + + + N ++ A + A IF+ +
Sbjct: 358 TYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFEIFEDM 417
Query: 130 KGL-KCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
K C PD T++ ++ I GRV M+NE M E+G P +L+ K
Sbjct: 418 KSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNE---MIESGFEPTIFVLTSLVQCYGK 474
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+R D + F ++ + GI+PD L++ +T EE +L + +++ + S +V
Sbjct: 475 AKRTDDVVKTFNQLLDMGIEPDDRFCGCLLNVMTQTPK-EELGKLIDCVEKANPKLS-FV 532
Query: 246 YRSLIDNLKKMGK 258
R L++ L+ G+
Sbjct: 533 VRYLVEGLEGDGE 545
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 3/253 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
CK GN+ A + + P+ AY +V + D +F++ +++L
Sbjct: 458 CKLGNMLMAKEFFDEMLHVGL-APDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPD 516
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y F + + ++++++ + + A ++ + + IF
Sbjct: 517 VITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFY 576
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
+ P ++TY +++ GR++ + F M+E GVVP+ I+YN L+N K+R
Sbjct: 577 DMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVR 636
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
++D +F EM E GI P+ TYT LI+ G +E+LRL+ M ++IRP +
Sbjct: 637 KMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHG 696
Query: 248 SLIDNLKKMGKVD 260
+L+ L K KV
Sbjct: 697 ALLKKLDKDYKVQ 709
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 52/311 (16%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNI-FLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I C+ GN+ A LL LR +N+ F YN ++ D++ + ++ +D++
Sbjct: 381 NTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI- 439
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIA-SPESIIVVNRIIFAF----- 113
+R + D YT + F +E++ + +P+ RI+
Sbjct: 440 -NRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDT 498
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
AK+ ++++ +L KG PD+ITYN+ ++ L ++G + + M G VPD
Sbjct: 499 AKAFKLQEEMLT----KGFP--PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDH 552
Query: 174 ISYNTLLN------NLRKIR-----------------------------RLDLCLIYFRE 198
++Y + ++ +LR+ R RLD + YF E
Sbjct: 553 VTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLE 612
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M E G+ P+++TY LI+ F + ++++ + F +M+++ I P+ Y Y LI+ MGK
Sbjct: 613 MQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGK 672
Query: 259 VDLAMTIFEEM 269
A+ ++ +M
Sbjct: 673 WQEALRLYAQM 683
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 20/285 (7%)
Query: 20 RLLQSLRDKNIFLP-----------------NAYNCVLVASAETNDIDLSFQILKDLLVS 62
R+L+ LRDKN+ + YN +L + + ++ + ++ +
Sbjct: 207 RILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQER 266
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
S + + Q I+E+ + S N +I + K + +A
Sbjct: 267 GCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEA 326
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L +++ + P + ++N ++ + G+++D + + M + ++PD ISYNTL+
Sbjct: 327 LALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYG 386
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
++ + I E+ + +++TY LID R G++E +L+L DM + I P
Sbjct: 387 FCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPD 446
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKAR 287
+ Y L++ K+G + +A F+EM L P F AR
Sbjct: 447 VVTYTVLVNGACKLGNMLMAKEFFDEM---LHVGLAPDQFAYTAR 488
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 126/272 (46%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLV 61
N I L K G + A L+Q + + + P YN ++ + + + + ++++
Sbjct: 276 NVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVT 335
Query: 62 S--SRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
S T++S F + M+D QL ++++ II N +I+ F +
Sbjct: 336 RGVSPTVASHNTIMYGFCKEGKMSDARQQL----SDMLKKNLMPDIISYNTLIYGFCRLG 391
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
I +A ++ D ++ +++TYN ++D L R+G + L M G+ PD ++Y
Sbjct: 392 NIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYT 451
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N K+ + + +F EM G+ PD YTA I + G+ ++ +L +M +
Sbjct: 452 VLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTK 511
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y ++ L K+G ++ A + ++M
Sbjct: 512 GFPPDVITYNVFVNGLCKLGNLEEAGELLQKM 543
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 11/261 (4%)
Query: 19 VRLLQSLRDKNIFLPNAYNCVLVASA-ETNDIDLS--FQILKD-------LLVSSRTLSS 68
+R+L S+R+K + CVL +T++ QIL D V R +S
Sbjct: 109 IRVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISF 168
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
+ Y I Q L+ E++++ + NRI+ + KAL ++
Sbjct: 169 EMY-GIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRM 227
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ +P + TYN +L + G V L+ M+E G P +++N L+N L K
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
L +EM ++G++ TY LI + + G + E+L L+ +M + + P++ + +
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347
Query: 249 LIDNLKKMGKVDLAMTIFEEM 269
++ K GK+ A +M
Sbjct: 348 IMYGFCKEGKMSDARQQLSDM 368
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 100/181 (55%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F +E+++ P S+ N ++ F K ++ A +FD I +P ++++N +++
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K +++ F EM +G+ P+ +
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID +TG+I+ ++ + +M +Q P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++ A +F + G P+ +T+ ++D + G ++ + + M G
Sbjct: 212 LINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQG 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +L
Sbjct: 272 FSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAL 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 YYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLS 374
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 27/279 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ + CK G + RL QS+ D K P+ ++N ++ D+D F++ +
Sbjct: 143 MHRFCKEGEM----RLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 61 VSSRTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
S + D YT + M +D +L F E + P + +I
Sbjct: 199 ASG--VQPDVYTYSVLINGLCKESKM-NDANEL--FGEMIGNGLVPNGVTFTT-LIDGHC 252
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVP 171
K+ I+ A+ + + PDLITYN ++ L + G + D+++E SMK G+ P
Sbjct: 253 KTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMK--GLKP 309
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y TL++ K L+ L Y + M + I+ D + YTALI R G ++ ++
Sbjct: 310 DKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKML 369
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+M ++P Y +I+ K G V + +EM
Sbjct: 370 REMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQ 408
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 15/247 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCV-----LVASAETNDIDLSFQILK 57
NGYI + G++ RL ++ + P+ Y L ++ ND + ++
Sbjct: 179 NGYI----RLGDLDEGFRLKSAMHASGV-QPDVYTYSVLINGLCKESKMNDAN---ELFG 230
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+++ + + +T T + +E+++ +I N +I+ K
Sbjct: 231 EMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKG 290
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++A + D + KPD ITY ++D + G + L M + + D ++Y
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYT 350
Query: 178 TLLNNL-RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
L++ L R+ + +D + REM G+KPD TYT +I+ F + G+++ +L +M++
Sbjct: 351 ALISGLCREGQSVDAEKM-LREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQR 409
Query: 237 QQIRPSI 243
P +
Sbjct: 410 DGHVPCV 416
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 98/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ + M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
++PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLS 374
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ CK G + A + S+ K P+ ++N ++ + D+D F+ LK ++ +S
Sbjct: 143 MHNFCKGGEIXLAQSVFDSIT-KWGLRPSVVSFNTLMNGYIKIGDLDEGFR-LKSVMQAS 200
Query: 64 RTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ D YT + M DD L +E++ + + +I K+
Sbjct: 201 -GVQPDVYTYSVLINGLCKESKM-DDANALF---DEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFI 174
+++ A+ I+ + PDLITYN ++ L + G + D+++E SMK G+ PD I
Sbjct: 256 RVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMK--GLKPDKI 312
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K L+ Y + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREM 372
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P I Y +I+ K G V + +EM
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T V++ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L++N K + L F + + G++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL + M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 DLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEM 232
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + D N +PN + ++ + +DL+ +I + +L S
Sbjct: 213 INGLCKESKMDDANALFDEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++L D +I N +I+ K +++A
Sbjct: 270 QSLLPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KP++ TYT +I+ F + G++ +L +M++ P++
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNV 416
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 63/138 (45%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + ++ +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ +F + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G +D + M +S
Sbjct: 183 KIGDLDEGFRLKSVMQAS 200
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 94/173 (54%), Gaps = 3/173 (1%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P +++ N ++ AF K+ + A H++ K KPD+ITY +++ + RV +
Sbjct: 245 PMTVVTFNSLM-AFQKT--VADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHV 301
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F M +G+ P I+YNTLL+ K + ++ F+ MG+ +PD+ +YT L+ ++
Sbjct: 302 VFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYA 361
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
TGN++++ RL MKQ + P++ Y +L+ + ++ + FE++ +
Sbjct: 362 NTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKA 414
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 135/293 (46%), Gaps = 27/293 (9%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLS---FQILKDL 59
YI LCKA + A R+ + L + P+A YN +L + F+ +K
Sbjct: 183 YINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGA 242
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
V ++ + F + + C + + + +I P+ +I +I A++K+R++
Sbjct: 243 GVPMTVVTFNSLMAFQKTVADAEACLRHM----QAAKI-KPD-VITYTGLINAYSKARRV 296
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
E+A ++F + +P I YN +LD + V + F SM + PD SY TL
Sbjct: 297 EEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTL 356
Query: 180 L------NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
L N++K RL + M ++G++P+++TY L+ + +I L+ F D
Sbjct: 357 LAAYANTGNMKKAERL------LKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFED 410
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDFKRKA 286
+++ I+P+ ++ L+ + + A++ F++M D P D + +A
Sbjct: 411 LQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKM----LDSGCPADQRSRA 459
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITY----------- 141
E+ ++ ++ ++ A A++ +A I+ + P +TY
Sbjct: 132 EMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAE 191
Query: 142 -------------------------NIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
N++L G+ G+ ++ F MK AGV +++
Sbjct: 192 RFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTF 251
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
N+L+ + + + CL R M + IKPD++TYT LI+++ + +EE+ +F +M
Sbjct: 252 NSLMAFQKTVADAEACL---RHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREMVA 308
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RPS Y +L+D K +V+ A ++F+ M
Sbjct: 309 SGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMG 342
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 33/199 (16%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A+ K Q A L F ++ + +P++ + +L+ R G + + M +
Sbjct: 111 NLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLK 170
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIE 225
G P ++Y +N L K R + F+ + ES KPD Y ++ ++G+ G
Sbjct: 171 TGPAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFS 230
Query: 226 ESLRLFNDMK--------------------------------QQQIRPSIYVYRSLIDNL 253
E LF MK +I+P + Y LI+
Sbjct: 231 EQQALFRQMKGAGVPMTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAY 290
Query: 254 KKMGKVDLAMTIFEEMNSS 272
K +V+ A +F EM +S
Sbjct: 291 SKARRVEEAHVVFREMVAS 309
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 97/222 (43%), Gaps = 2/222 (0%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT 72
+ A +R +Q+ + K + Y ++ A ++ ++ + + ++++ S S Y
Sbjct: 262 ADAEACLRHMQAAKIKPDVI--TYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYN 319
Query: 73 NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGL 132
A+ + + + Q I ++ A+A + ++KA + +K
Sbjct: 320 TLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQA 379
Query: 133 KCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
+P+++TY ++ V +N ML F +++AG+ P+ + L+ + +
Sbjct: 380 GLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESA 439
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
L +F++M +SG D + AL+D+ + +E L F +
Sbjct: 440 LSWFKKMLDSGCPADQRSRAALMDACQTSEQKQEVLEYFGSL 481
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 117 RQIEKALLIFDHIKGLKCKP----DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
RQ+ K ++ + + LK + + +N+++ G++G+ F M+E G+ P+
Sbjct: 82 RQLNKWTMVLEVLLWLKQQDWWNFGIHDFNLMIAAYGKLGQPGIAELSFTEMREVGLEPN 141
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
+ +LL + ++EM ++G P +TY I++ + ++ R+F
Sbjct: 142 VACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAERFNDAERIFK 201
Query: 233 DMKQQ-QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + + +P +Y ++ K GK +F +M +
Sbjct: 202 CLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGA 242
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE+++ P S+ N ++ F K I A +FD I +P +++YN +++
Sbjct: 125 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 184
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +G PD +Y+ L+N L K ++D F EM G+ P+ +
Sbjct: 185 RLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXV 244
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 245 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 304
Query: 270 N 270
+
Sbjct: 305 S 305
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 109 IIFAFAKSRQIEKALLIFDH--IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I K +++ A +FD +KGL P+ +T+ ++D + GRV+ + + M
Sbjct: 214 LINGLCKESKMDGANELFDEMLVKGLV--PNXVTFTTLIDGHCKNGRVDLAMEIYKQMLS 271
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
++PD I+YNTL+ L K L EM G+KPD TYT LID + G+++
Sbjct: 272 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDT 331
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ M Q+ IR Y +LI L + G+ A + EM S
Sbjct: 332 AFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 376
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 21/275 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G++ A + ++ K P+ +YN ++ D+D F++ +L S
Sbjct: 145 MHRFCKDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 203
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLL------IFIEEVVQIASPESIIVVNRIIFAFAKSR 117
D YT + ++ C + +F E +V+ P + + +I K+
Sbjct: 204 XX--PDVYT---YSVLINGLCKESKMDGANELFDEMLVKGLVP-NXVTFTTLIDGHCKNG 257
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFI 174
+++ A+ I+ + PDLITYN ++ L + G + +D+++E M G+ PD
Sbjct: 258 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE---MSXKGLKPDKF 314
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y TL++ K LD + + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 315 TYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 374
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P Y +I+ K G V + +EM
Sbjct: 375 LSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 64/138 (46%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + E + F + +L +L K++ L
Sbjct: 65 RSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWG 124
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E+ E G L + L+ F + G+I + +F+ + + +RPS+ Y +L++
Sbjct: 125 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 184
Query: 255 KMGKVDLAMTIFEEMNSS 272
++G +D + M +S
Sbjct: 185 RLGDLDEGFRLKSAMLAS 202
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 134/279 (48%), Gaps = 17/279 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYN-CVLVAS-AETNDIDLSFQILKDLL 60
N +I LCKAG + + +L+ + D+ P+ C +++ + N ID +FQ+ K +L
Sbjct: 155 NTFISGLCKAGKLDKGLEMLEEM-DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGML 213
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQL--LIFIEEVVQIASPESIIVVNR----IIFAFA 114
S Y+ IM D+ ++ L +EEV++ ++ +I A
Sbjct: 214 ERGCVPDSLTYS------IMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALI 267
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
++ IE A ++ C ++ T+N + L R G+ N M E+G +P+ +
Sbjct: 268 RAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLL 327
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIEESLRLFND 233
SYN +++ L K +D R+M +SG KPD++ + LI F + G + ++ +L +
Sbjct: 328 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKE 387
Query: 234 MKQQQI-RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
MK + I P + Y ++ID K G + A + EEM +
Sbjct: 388 MKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQA 426
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 5/240 (2%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
YN ++ + + ++L + + S YT + D ++++
Sbjct: 13 YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72
Query: 96 QIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN 155
+++ +I K+R+ A+ + C+PDL+TYN ++ L R++
Sbjct: 73 DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132
Query: 156 D---MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
D +L E M E+G +PD ++YNT ++ L K +LD L EM GI PD++T+
Sbjct: 133 DAGLVLQEL--MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFC 190
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++I + I+++ ++F M ++ P Y ++DNL + ++D + E M S
Sbjct: 191 SIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS 250
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 8/274 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK+G++ AA LLQ + D PN Y ++ + + Q +K +L S
Sbjct: 52 IDGLCKSGDLDAAQALLQKMADAGC-APNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 110
Query: 64 RTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + M DD L+ E +++ ++ N I K+ +++
Sbjct: 111 CEPDLVTYNSLIHGLCMANRMDDAG--LVLQELMIESGRIPDVVTYNTFISGLCKAGKLD 168
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
K L + + + PD++T+ ++ L + R++D F M E G VPD ++Y+ +L
Sbjct: 169 KGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIML 228
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+NL + RLD M +SG TY LI + R G+IE + + +
Sbjct: 229 DNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCV 288
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+Y + + I L + GK LA I M S S
Sbjct: 289 MEVYTHNAFIGALCRSGKFPLAKNILLGMIESGS 322
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+ N +I K+R+ AL + + ++TY ++D L + G ++ M
Sbjct: 12 IYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKM 71
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+AG P+ ++Y L++ L K RR + + M SG +PDL+TY +LI +
Sbjct: 72 ADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 131
Query: 225 EESLRLFNDMKQQQIR-PSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+++ + ++ + R P + Y + I L K GK+D + + EEM+
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMD 178
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 44/307 (14%)
Query: 6 IEKLCKAGNVSAAV----RLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
I+ LCKA A+ R+L+S + ++ YN ++ N +D + +L++L++
Sbjct: 87 IDGLCKARRPHDAIQTVKRMLRSGCEPDLV---TYNSLIHGLCMANRMDDAGLVLQELMI 143
Query: 62 -SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S R Y F + L +EE+ + ++ II K+ +I+
Sbjct: 144 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRID 203
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGR---VNDMLNE----------------- 160
A +F + C PD +TY+I+LD L R R V ++L
Sbjct: 204 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLI 263
Query: 161 ---------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ EAG V + ++N + L + + L M ESG
Sbjct: 264 HALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSL 323
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKKMGKVDLAMT 264
P+LL+Y +ID ++GN++++ +L M +P + + +LI K G++ A
Sbjct: 324 PNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQ 383
Query: 265 IFEEMNS 271
+ +EM +
Sbjct: 384 LLKEMKA 390
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%)
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
D YN ++ L + + L M G ++Y TL++ L K LD
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
++M ++G P+++TYTALID + ++++ M + P + Y SLI L
Sbjct: 69 QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128
Query: 257 GKVDLAMTIFEEM 269
++D A + +E+
Sbjct: 129 NRMDDAGLVLQEL 141
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 91/237 (38%), Gaps = 40/237 (16%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCKA + A ++ + + ++ +P++ Y+ +L + N +D ++L+ ++ S
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGC-VPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA- 122
S Y A I D E+ ++ + N I A +S + A
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAK 311
Query: 123 --------------LLIFDH-IKGLK--------------------CKPDLITYNIVLDI 147
LL ++ I GL CKPD+I +N ++
Sbjct: 312 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 371
Query: 148 LGRVGRVNDMLNEFASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESG 203
+ GR++ MK + VPD ++YNT+++ K L + EM G
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 9/274 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCVLVASAE---TNDIDLSFQILK 57
N Y+E L K+G +S A + ++ + I LP N + ++ + ++ D F+ ++
Sbjct: 166 NTYLEVLGKSGRLSQAEDTFRDMQKQGI-LPAVNTFTIMINIYGKAYYSDKADDLFRSMR 224
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
L + YT A +C + E+ + + N ++ A+++
Sbjct: 225 KALCPPNLYT---YTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGE 281
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
A +F + +PD ++YNI++D GR G D + SMKEAG P S+
Sbjct: 282 HPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHM 341
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LL++ K ++ RE+ SG+KPD + +L+ ++G +G I+E L M
Sbjct: 342 LLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSS 401
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+P I +LI+ + G ++ A +F + S
Sbjct: 402 VAKPDISTLNTLINAYAQGGYIEKAEEVFNSLES 435
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI---------TYNIVLDILGRVGRVNDM 157
N ++ A+++ Q+EKA +F +K P + TYN L++LG+ GR++
Sbjct: 122 NVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQA 181
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ F M++ G++P ++ ++N K D FR M ++ P+L TYTAL+++
Sbjct: 182 EDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNA 241
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
R GN + +F +++ P +Y Y +L++ + A +F+ M
Sbjct: 242 HAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAM 293
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N +I A+ KS+Q +A F +K +C P ++N++L R ++ F MKE
Sbjct: 87 NMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKE 146
Query: 167 AGVVPDFI---------SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
+ P + +YNT L L K RL FR+M + GI P + T+T +I+
Sbjct: 147 SNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINI 206
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+G+ +++ LF M++ P++Y Y +L++ + G A IF E+ S
Sbjct: 207 YGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQS 260
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV---GRVNDML 158
I N + KS ++ +A F ++ P + T+ I+++I G+ + +D+
Sbjct: 161 GIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLF 220
Query: 159 NE--------------------------------FASMKEAGVVPDFISYNTLLNNLRKI 186
FA ++ G +PD +YN LL +
Sbjct: 221 RSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRG 280
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
F+ M E+G++PD ++Y LID+FGR G ++ +++ MK+ +P++ +
Sbjct: 281 EHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSH 340
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNSS 272
L+ + K GKV A + E+ +S
Sbjct: 341 MLLLSSYAKAGKVTEAERLVREIENS 366
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 117 RQIEKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
R +LI + I +G KPD+ +N+++D G+ + + F MK+ +P S
Sbjct: 61 RNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETS 120
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKP---------DLLTYTALIDSFGRTGNIEE 226
+N LL + +L+ F EM ES P + TY ++ G++G + +
Sbjct: 121 FNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQ 180
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ F DM++Q I P++ + +I+ K D A +F M +L
Sbjct: 181 AEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKAL 227
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
N ++ A+ S +I++ + + + KPD+ T N +++ + G + F S++
Sbjct: 376 NSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLES 435
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
G+ PD +S+ +L+ + + C+ F++M ++G PD T + S
Sbjct: 436 KGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLSS 486
>gi|449479638|ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 98/180 (54%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
IF E +++ + N +I A+ + +KA+L F+H++ +PDL+T+N +L L
Sbjct: 166 IFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTAL 225
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
R G+ D + +A M+ + PD +SYN L + +R+ + +M E IKPD+
Sbjct: 226 YRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDV 285
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
Y LI SF + G++EE+ + + +K+ ++ P+ YR+L+ L + G D + + +E
Sbjct: 286 HIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKE 345
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI-KGLKCKPDLITYNI 143
+Q +E+ ++ ++ N ++ + KS++ ++ IF + + L + D+ +YNI
Sbjct: 126 SQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNI 185
Query: 144 VLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL-RKIRRLDLCLIYFREMGES 202
V++ + + + F M++ G+ PD +++NTLL L RK + LD ++ R M
Sbjct: 186 VINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWAR-MENK 244
Query: 203 GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
I PDL++Y A + I++ + L M++++I+P +++Y +LI + K G ++ A
Sbjct: 245 NIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEA 304
Query: 263 MTIFEEMNSSLSD 275
+ ++ S D
Sbjct: 305 KKWYYKLKESEVD 317
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 4/264 (1%)
Query: 11 KAGNVSAAVRLLQSLRD-KNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
KAG S A +L L + K ++N +LV+ ++ + D +I +++ ++ +D
Sbjct: 121 KAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREV-PQELSIEAD 179
Query: 70 --CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
Y A+ DD + ++F + + ++ N ++ A + Q ++
Sbjct: 180 VSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWA 239
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
++ PDL++YN L + R+ D + A M+E + PD YNTL+ + K
Sbjct: 240 RMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDG 299
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
L+ ++ ++ ES + P+ TY L+ G+ + L+L + ++ +
Sbjct: 300 DLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQ 359
Query: 248 SLIDNLKKMGKVDLAMTIFEEMNS 271
++D L ++ K + A + E NS
Sbjct: 360 RVVDGLAEVSKTEEAKDLVELYNS 383
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 98/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F E+ ++ P S+ N ++ F K +I+ A +FD I +P +++N +++
Sbjct: 123 FYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ +M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 RLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L +NI++ + G + + F ++ + G+ P +S+NTL+N ++ LD
Sbjct: 136 LYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKN 195
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG++PD+ TY+ LI+ + ++ + LFN+M + P+ + +LID K G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 258 KVDLAMTIFEEM-NSSLS 274
+VDLAM I+++M + SLS
Sbjct: 256 RVDLAMEIYKQMLSQSLS 273
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G + A + ++ + P A +N ++ D+D F+ LK+ + +S
Sbjct: 143 MHRFCKEGEIKLAQSVFDAITKWGL-RPTAVSFNTLMNGYIRLGDLDEGFR-LKNAMQAS 200
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D YT + ++ C + + E++ + + +I K+ +
Sbjct: 201 -GVQPDVYT---YSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVPDFIS 175
++ A+ I+ + PDLITYN ++ L + G + D+++E SMK G+ PD ++
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMK--GLKPDKVT 313
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y TL++ K L+ Y + M + I+ D + YTALI + G ++ ++ +M
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P I Y +I+ K G V + +EM
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +F+ + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + D N +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDYANELFNEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD +TY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KP++ TYT +I+ F + G++ +L +M++ PS+
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L++ K + L F + + G++P +++ L++ + R G
Sbjct: 126 DSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL N M+ ++P +Y Y LI+ L K K+D A +F EM
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEM 232
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 40/307 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLL-QSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
N ++ LCK+G V A+ + Q + + PN YNC++ A +I +++++++ +
Sbjct: 213 NTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKM 272
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE--VVQIASPESIIVVNRIIFAFAKSR 117
+ L F E V + + + ++ A +
Sbjct: 273 ENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTN 332
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ A+ +F PD I Y ++ L + GR+ D + +SMKEAG D +YN
Sbjct: 333 NVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYN 392
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID--------------------- 216
L+ + +RL +EM E GI+PD+ TY L+
Sbjct: 393 ILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDD 452
Query: 217 -------SFG-------RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
+FG + G I+E+LR+ M + I P+ +Y +LID L K G VDLA
Sbjct: 453 GCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLA 512
Query: 263 MTIFEEM 269
+ +F+EM
Sbjct: 513 IELFDEM 519
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA------YNCVLVASAETNDIDLSFQIL 56
N + LC+AG AA L+ R+K P Y+ ++ A TN++ ++ ++
Sbjct: 285 NTIVGGLCRAGRTGAA---LEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELF 341
Query: 57 KDLLVSSRTLSSDCY----TNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
+ + + + Y + +A + D C+ E ++ + N +I
Sbjct: 342 HEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTK----AYNILIAG 397
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPD 172
F + +++ +A + +K + +PD+ TYN +L + G + M + G P
Sbjct: 398 FCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPS 457
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFN 232
I++ TL++ K+ ++D L R M ESGI P+ + Y LID + G+++ ++ LF+
Sbjct: 458 VITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFD 517
Query: 233 DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+MK++ + ++ + +L+ L+ + A + ++M
Sbjct: 518 EMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 5/181 (2%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGL-KCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+ N I+ A A+ R + I+ ++G +PD++TY I+++ L + GRV D L
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 162 ASM--KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGES--GIKPDLLTYTALIDS 217
M ++ + PD ++ NT+++ L K R+ L + + S G P+ +TY LID+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
F R GNI + L M+ + + +I +++ L + G+ A+ F E + +
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK 315
Query: 278 G 278
G
Sbjct: 316 G 316
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 172 DFISYNTLLNNLRKIRRL-DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
D ++N++L L ++R + + IY G + ++PD++TY L++ + G + ++LR+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194
Query: 231 FNDMKQQ--QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSL 273
+ M +Q IRP + +++D L K G+V A+ E+ SS+
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSV 239
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILK------- 57
I L +AG + A + S+++ L AYN ++ + ++++L+
Sbjct: 360 ISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419
Query: 58 --DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
D+ + LS C A F D+ + +++ S+I ++ + K
Sbjct: 420 RPDVCTYNTLLSGSCK---AGDFAAVDE------LLGKMIDDGCQPSVITFGTLVHGYCK 470
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+I++AL I + P+ + YN ++D L + G V+ + F MKE V + +
Sbjct: 471 VGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTT 530
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
+N LL LR + +M E PD +T L++ G E+ RL M+
Sbjct: 531 FNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIG---ETDRLKRFMQ 587
Query: 236 QQQ 238
Q +
Sbjct: 588 QGE 590
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 99/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ +M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 KLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ +I K+ +++ A+ I+ + PDLITYN ++ L + G + +
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G+ PD I+Y TL++ K L+ Y + M + I+ D + YTALI + G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++ ++ +M ++P I Y +I+ K G V + +EM
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + D N +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KP++ TYT +I+ F + G++ +L +M++ PS+
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSV 416
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + G++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N++E RL N M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 NLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 232
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G + D + + KE F + +L +L K++ L ++ E E G L +
Sbjct: 80 GFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFF 139
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+ SF + G I + +F+ + + +RPS+ + +L++ K+G +D + M +
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQA 199
Query: 272 S 272
S
Sbjct: 200 S 200
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
C+ + + G + A L+ + + P YN +L + + +L ++
Sbjct: 296 CSTVLSACGREGLIDEAREFFSGLKSEG-YKPGTVTYNALLHVFGKAGIFSEALSVLSEM 354
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
++ + Y A++ + + I+ + + + II A+ + I
Sbjct: 355 EENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDI 414
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+KAL +FD + L C P++ TYN VL +LG+ +M+ MK G P+ I++NT+
Sbjct: 415 DKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTM 474
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L K FREM G +PD T+ LI ++GR G+ ++ ++ +M +
Sbjct: 475 LAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGF 534
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P I Y +L++ L + G A ++ +M
Sbjct: 535 SPCINTYNALLNALARRGDWKAAESVILDM 564
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 36/197 (18%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND----MLNE---- 160
I+ A++++ + +A+ IF+ + P L+TYN++LD+ G++GR D +L+E
Sbjct: 228 ILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSR 287
Query: 161 ----------------------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLC 192
F+ +K G P ++YN LL+ K
Sbjct: 288 GLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEA 347
Query: 193 LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
L EM E+ PD +TY ++ ++ R G EE + + M + I P+ Y ++I+
Sbjct: 348 LSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINA 407
Query: 253 LKKMGKVDLAMTIFEEM 269
++G +D A+ +F++M
Sbjct: 408 YGRVGDIDKALEMFDQM 424
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 115/269 (42%), Gaps = 15/269 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L + G+ AA ++ +R+K F P+ +Y+ ++ + A+ ++ I K +
Sbjct: 542 NALLNALARRGDWKAAESVILDMRNKG-FRPSETSYSLMVHSYAKGGNVKGIEMIEKSIY 600
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPES----IIVVNRIIFAFA 114
D + ++ R ++ + + L +E Q +++ N ++ FA
Sbjct: 601 ------DGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFA 654
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K+ ++A + I +PDL+T+N ++D+ R G ++ +G PD +
Sbjct: 655 KNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLV 714
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
SYNT++ + + + EM G+ P + TY I + G E + + M
Sbjct: 715 SYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYM 774
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
RP+ Y+ + D K + D A+
Sbjct: 775 IVHNCRPNELTYKIVADGYCKARRYDEAI 803
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 58/115 (50%)
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
M F ++++ G PD + N++L+ K D R + ++G++PDL+T+ +L+D
Sbjct: 627 MERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMD 686
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ R G+ ++ + ++ +P + Y ++I + G + + I EM S
Sbjct: 687 MYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTS 741
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 76/198 (38%), Gaps = 40/198 (20%)
Query: 112 AFAKSRQIEKALLIFD----HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEA 167
A S EKALL+F+ ++ K D +++ ILGR + F +
Sbjct: 157 ALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLD 216
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF--------- 218
V D +Y T+L+ + + + F M ESG+ P L+TY ++D +
Sbjct: 217 DYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDK 276
Query: 219 ---------------------------GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
GR G I+E+ F+ +K + +P Y +L+
Sbjct: 277 ILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLH 336
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G A+++ EM
Sbjct: 337 VFGKAGIFSEALSVLSEM 354
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 95/240 (39%), Gaps = 19/240 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS----AETNDIDLSFQILK---- 57
+ K GNV + +S+ D +IF LV + ++ +FQ L+
Sbjct: 580 VHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGY 639
Query: 58 --DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
DL++ + LS N M D ++L I + ++ N ++ +A+
Sbjct: 640 KPDLVLCNSMLSIFAKNN------MYDRAHEMLRLIHDA---GLQPDLVTHNSLMDMYAR 690
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
KA + ++ KPDL++YN V+ R G + + + + M GV P +
Sbjct: 691 GGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFT 750
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YNT ++ M +P+ LTY + D + + +E++ + +K
Sbjct: 751 YNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIK 810
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK-VDLAMTI 265
D+ YT ++ ++ RTG ++ +F M + + PS+ Y ++D KMG+ D + +
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILEL 280
Query: 266 FEEMNS 271
+EM S
Sbjct: 281 LDEMRS 286
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
EE+++ I N ++ A A+ + A + ++ +P +Y++++ +
Sbjct: 527 EEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKG 586
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G V + S+ + + P ++ TL+ K R L F+ + + G KPDL+
Sbjct: 587 GNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLC 646
Query: 212 TALIDSFGRTG---NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+++ F + E LRL +D Q P + + SL+D + G A +
Sbjct: 647 NSMLSIFAKNNMYDRAHEMLRLIHDAGLQ---PDLVTHNSLMDMYARGGDCWKAEEVLRM 703
Query: 269 MNSS 272
+ +S
Sbjct: 704 LQTS 707
>gi|413953460|gb|AFW86109.1| hypothetical protein ZEAMMB73_051838 [Zea mays]
Length = 240
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 93/186 (50%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
+ ++ +EE+ + P +I A K+++ + A +F +K Y +++
Sbjct: 29 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 88
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
LG+ GR++D +N F M + G PD +YN L++ L + +D L R M E G
Sbjct: 89 KHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMIDEALSTMRRMQEHGCI 148
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD+ +Y +++ +TG ++ + ++MKQ + P + Y +++ L G + A +
Sbjct: 149 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVSPDVVSYNTVLGALSHAGMFEEASKL 208
Query: 266 FEEMNS 271
+EMN+
Sbjct: 209 MKEMNT 214
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+E+ + S V +I K+ +++ A+ +FD + L C PD+ YN ++ L
Sbjct: 68 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLA 127
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R G +++ L+ M+E G +PD SYN +LN L K + M +S + PD++
Sbjct: 128 RTGMIDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVSPDVV 187
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+Y ++ + G EE+ +L +M + Y S+ L+ +GKVD
Sbjct: 188 SYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSI---LEAIGKVD 235
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%)
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
AK KA+++ + + P Y ++D LG+ R + F +KE
Sbjct: 22 AKPTGWRKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSA 81
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
Y ++ +L K RLD + F EM + G PD+ Y AL+ RTG I+E+L
Sbjct: 82 RVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMIDEALSTMRR 141
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
M++ P I Y +++ L K G AM + M S
Sbjct: 142 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 180
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 127/268 (47%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA ++ A L++ + ++ F PNA +N ++ A + ++ ++ +
Sbjct: 17 VDGLCKANRLTDAFELVEVMGERGCF-PNALVFNGIMDALCKEGRSAEAYGFIETMRSMG 75
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y F + + L ++E+ + + N + K +++ AL
Sbjct: 76 VSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDAL 135
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + K + D+ Y ++D L + G++ + + M+ +G VP YN +L+ L
Sbjct: 136 ALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWL 195
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R++ F+ M SGI PD LT+ ++ + R I+++L L MK + P
Sbjct: 196 CKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPRE 255
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+Y +LID L + G+V A + +EM S
Sbjct: 256 VIYNTLIDALNRAGRVSEAYRLLQEMIS 283
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 90/171 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ ++ K+ ++ A + + + C P+ + +N ++D L + GR +
Sbjct: 9 TVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFI 68
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+M+ GV P ++YN L++ K +L L +EM G +P+ +TY + +
Sbjct: 69 ETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY 128
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G ++++L LF M +++IR +Y Y +LID L + GK+ A ++ +EM +S
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS 179
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 108/246 (43%), Gaps = 3/246 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG ++ LCK G + A ++++R + P YN ++ + + + +IL+++
Sbjct: 49 NGIMDALCKEGRSAEAYGFIETMRSMGVS-PTIVTYNLLIDGFCKEEKLHRALEILQEMT 107
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y F L + + + +I ++ ++
Sbjct: 108 GRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLA 167
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D ++ C P YN +L L + R+N+ F M +G++PD++++ ++
Sbjct: 168 EAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMV 227
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ R+D L+ ++M +G+ P + Y LID+ R G + E+ RL +M + +
Sbjct: 228 FGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLS 287
Query: 241 PSIYVY 246
P+ Y
Sbjct: 288 PNSRTY 293
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+V N I+ A K + +A + ++ + P ++TYN+++D + +++ L
Sbjct: 46 LVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQE 105
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M G P+ ++YNT L+ L K ++D L FR M E I+ D+ YT LID + G
Sbjct: 106 MTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGK 165
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ E+ L ++M+ P Y +++ L K +++ A +F+ M S
Sbjct: 166 LAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGS 214
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C P ++T+ I++D L + R+ D M E G P+ + +N +++ L K R
Sbjct: 6 CIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAY 65
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+ M G+ P ++TY LID F + + +L + +M + P+ Y + + L
Sbjct: 66 GFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGL 125
Query: 254 KKMGKVDLAMTIFEEMN 270
K GKVD A+ +F M
Sbjct: 126 CKYGKVDDALALFRAMT 142
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 3/209 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + A+ +LQ + + PN YN L + +D + + + +
Sbjct: 87 IDGFCKEEKLHRALEILQEMTGRG-HEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKK 145
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L YT + ++E+ N I+ K +I +A
Sbjct: 146 IRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAH 205
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + G PD +T+ +++ R R++D L MK AG+ P + YNTL++ L
Sbjct: 206 KLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDAL 265
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ R+ +EM G+ P+ TY
Sbjct: 266 NRAGRVSEAYRLLQEMISRGLSPNSRTYA 294
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E G +P +++ L++ L K RL MGE G P+ L + ++D+ + G
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
E+ M+ + P+I Y LID K K+ A+ I +EM
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTG 108
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 52 SFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIF 111
++ + L+ S ++ Y + F + Q L ++E+ ++++ II
Sbjct: 14 GYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIR 73
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
+ ++ +ALL F I G C P++ TY+ ++D L + G+ ++ M + G P
Sbjct: 74 GLCTAGKVSQALLHFRRI-GEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSP 132
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ ++YN L++ RK+ RLD L+ +EM + G + D++TYT ++D F + +I+E+ RL
Sbjct: 133 NVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLL 192
Query: 232 NDMKQQQIRPSIYVYRSLIDNLK--KMGKVDLAMTIFEEM 269
N ++++ ++ Y SL L + + A+++ E+M
Sbjct: 193 NALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLEKM 228
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
++Y I++ + G L MK GV P+ + + T++ L ++ L++FR
Sbjct: 31 VSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRR 90
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+GE P++ TY+ L+D+ ++G E+ L +M ++ P++ Y +LID +K+ +
Sbjct: 91 IGED-CAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149
Query: 259 VDLAMTIFEEMN 270
+D + + +EM+
Sbjct: 150 LDEVLMLLKEMS 161
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 107/235 (45%), Gaps = 2/235 (0%)
Query: 35 AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEV 94
Y +L + N ID ++++L L + + +T + A D T+ L +E++
Sbjct: 171 TYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTA--EGDRTTEALSLLEKM 228
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+Q + + + ++ K+ ++++A + + CK D ++Y I++ GR
Sbjct: 229 IQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRT 288
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
D L M +G + D + N +++ K L F+ M + G P +TY L
Sbjct: 289 YDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTL 348
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I +F + + +++L + M Q +P++ Y S+I + + + + A IF+ M
Sbjct: 349 IGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMM 403
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LCK + A ++L S+ + + +Y ++VA A S ++L +L S L
Sbjct: 247 LCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILD 306
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ F D + + + Q S S + N +I AF K++Q + A+ +
Sbjct: 307 TKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLH 366
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ KP++ITYN ++ R R + F M + G PD +SY TL
Sbjct: 367 QMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N ++ LCK +V A + Q LR N++N ++ + + + ++++
Sbjct: 299 NVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQH 358
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ S YT+ A+ M D + ++E+ + P +++ ++ A K+ + +A
Sbjct: 359 GFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREA 418
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L FD +K PD YN ++ ILGR GR+ D + M+ G+ P+ ++NTL++
Sbjct: 419 LDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISA 478
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ + L +M E PD+ TYT L+ + ++ L L M ++ I P
Sbjct: 479 ACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 538
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y L+ L + GKV + EEM S
Sbjct: 539 FSTYTLLVSWLCRNGKVAQSCLFLEEMVS 567
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+N ++ K R +++A +F ++G PD ++N ++ + + + L+ M
Sbjct: 297 AMNVLLDTLCKERSVKRARGVFQELRG-TIPPDENSFNTLVHGWCKARMLKEALDTMEEM 355
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K+ G P ++Y +L+ + EM + P+++TYT L+ + G+ G
Sbjct: 356 KQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRT 415
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E+L F+ +K+ + P Y SLI L + G+++ A ++ EEM ++
Sbjct: 416 REALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTT 463
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 97/180 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ +M+ +GV PD +Y+ L+N L K ++D F EM + G+ P+ +
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 17 AAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+RL QS+ D K P+ ++N ++ + D+D F++ + VS + D Y
Sbjct: 150 GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSG--VQPDVY 207
Query: 72 T------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
T + M DD L +E++ + + +I K+ +++ A+ I
Sbjct: 208 TYSVLINGLCKESKM-DDANXLF---DEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + PDLITYN ++ L + G + + M G+ PD I+Y TL++ K
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCK 323
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
L+ Y + M + I+ D + YTALI + G ++ ++ +M ++P I
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGT 383
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I+ K G V + +EM
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + DK + +PN + ++ + +DL+ +I K +L S
Sbjct: 213 INGLCKESKMDDANXLFDEMLDKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++LS D +I N +I+ K +++A
Sbjct: 270 QSLSPD---------------------------------LITYNTLIYGLCKKGDLKQAQ 296
Query: 124 LIFDHI--KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ D + KGL PD ITY ++D + G + M + + D ++Y L++
Sbjct: 297 DLIDEMIMKGLX--PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALIS 354
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + R REM G+KP++ TYT +I+ F + G++ +L +M++ P
Sbjct: 355 GLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Query: 242 SI 243
S+
Sbjct: 415 SV 416
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T VL+ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + ++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL N M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 DLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEM 232
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 62/138 (44%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+ D+ ++ ++ G + D + + KE F + +L +L K++ L
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
++ E E G L + L+ SF + G I + +F+ + + +RPS+ + +L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 255 KMGKVDLAMTIFEEMNSS 272
K+G +D + M S
Sbjct: 183 KLGDLDEGFRLKNAMQVS 200
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ C+ G+++ A+ ++ + + PN+ +N ++ + ++D + + +K +
Sbjct: 390 NTFVNGYCRIGDMNKAILTIERMESFGL-RPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448
Query: 61 VSSRTLSSDCYTNFARAF---IMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
T S + Y + D C Q+L E++ +I +++ +I K
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQIL---EQMEEIGVKPNVVSYGSLINCLCKDG 505
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+I +A ++ + P+ YN+++D VG+V D L F M + + P ++YN
Sbjct: 506 KILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYN 565
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L K +L + ++ SG PD++TY +LI + GN+ + L L+ MK
Sbjct: 566 VLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNL 625
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I+P++ Y LI K G ++L ++ EM
Sbjct: 626 GIKPTVRTYHPLISGCSKEG-IELVEKLYNEM 656
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 10 CKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSRTLSS 68
C GN A+ L + +K I + N +L+ + ++ + +ILK +
Sbjct: 329 CDDGN--GAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADE 386
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
Y F + D + ++ IE + + I N +I F ++++KA
Sbjct: 387 VIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKK 446
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRR 188
+ P + TYN ++D G++ + M+E GV P+ +SY +L+N L K +
Sbjct: 447 MAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGK 506
Query: 189 LDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRS 248
+ I R+M G+ P+ Y LID G ++++LR F++M + +I P++ Y
Sbjct: 507 ILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNV 566
Query: 249 LIDNLKKMGKVDLAMTIFEEMNSS 272
LID L K GK+ A ++ SS
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSS 590
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F++ + + ++ + N +I + ++I A +FD + + ++TYN ++D
Sbjct: 198 FLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYC 257
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+VG ++ MKE V P+ I++N+LL+ L K+R++ +EM +G PD
Sbjct: 258 KVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGY 317
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
TY+ L D R + ++ L+ ++ IR + Y L++ L K GKV+ A I ++
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKK 376
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 8/265 (3%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G + A +L+ + + + LPNA YN ++ S + + + +++ S +
Sbjct: 501 LCKDGKILEAEIVLRDMICRGV-LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISP 559
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ Y T+ F+ ++ +I N +I +A + + K L ++
Sbjct: 560 TLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLY 619
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVG--RVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ +K L KP + TY+ ++ + G V + NE M ++PD + YN +++
Sbjct: 620 ETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMN---LLPDRVVYNAMIHCYA 676
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+I + M + GI PD +TY +LI R G + L N+MK +++ P
Sbjct: 677 EIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKAD 736
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+ + A + EM
Sbjct: 737 TYDILVKGHCDLKDFSGAYVWYREM 761
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 121/304 (39%), Gaps = 44/304 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K N+ + L S+R + + PN YN ++ I + ++ ++ +
Sbjct: 183 IQAAVKLQNLKMGMEFLDSMRKRGV-RPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNIN 241
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
S Y + + E + + + +II N ++ K R++++A
Sbjct: 242 LVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEAR 301
Query: 124 LIFDHIKGLKCKPDLITYNIVLDIL----------------------------------- 148
+ ++ PD TY+I+ D L
Sbjct: 302 SLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGL 361
Query: 149 ---GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
G+V + ++L +F E G+V D + YNT +N +I ++ ++ M G++
Sbjct: 362 CKQGKVEKAEEILKKFT---ENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLR 418
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
P+ +T+ +LID F ++++ M ++ + PS+ Y +LID K+ D I
Sbjct: 419 PNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQI 478
Query: 266 FEEM 269
E+M
Sbjct: 479 LEQM 482
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 87/180 (48%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+ I SI+ N +I + K +++ A + + +K P++IT+N +L L ++
Sbjct: 235 DEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKM 294
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
++ + + M+ G +PD +Y+ L + L + + + + + E GI+ + T
Sbjct: 295 RKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTG 354
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ L++ + G +E++ + + + +Y + ++ ++G ++ A+ E M S
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
F ++ +G D Y + K++ L + + + M + G++P++ Y LI R
Sbjct: 164 FMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCR 223
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I ++ ++F++M + SI Y +LID K+G++D A + E M
Sbjct: 224 EKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM 272
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG--R 150
E++Q+ +V N +I +A+ +KA + + PD +TYN + ILG R
Sbjct: 655 EMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSL--ILGHFR 712
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G+++++ + +MK + P +Y+ L+ ++ +++REM E+ P+
Sbjct: 713 EGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASI 772
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L + G ++E + ++M + I
Sbjct: 773 CNELTAGLEQEGRLQEVQVICSEMNVKGI 801
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 22/276 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETND--------IDLSFQ 54
NGY CKAG + A+ L++ L+ + L+ +D +++
Sbjct: 127 NGY----CKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAG 182
Query: 55 ILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
++D++V YT+F + ++++ + N II++
Sbjct: 183 DVQDVIV---------YTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLC 233
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG-VVPDF 173
K ++ +A + D KC P + +++D L + RV + M EAG P
Sbjct: 234 KDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSV 293
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++Y+ +++ L K RLD I ++M +G PD++TYTA+ID+F + G ++E+ LF
Sbjct: 294 VTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQR 353
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
M ++ + Y LI + KVD A+ + EEM
Sbjct: 354 MHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEM 389
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 84/156 (53%)
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL IF + +K KPD Y +V+ L ++ +++ + F M ++G +PD ++Y L+
Sbjct: 32 KALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLV 91
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++L K + + F EM G P+L+TY +++ + + G I+++L L +K
Sbjct: 92 HSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRS 151
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
PS +Y +LID L K + + A +FE + D+
Sbjct: 152 PSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQDV 187
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ +K P ++T+ ++ L + N L F M + V PD Y ++ +L
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
KI +LDL YF +M +SG PD +TYT L+ S + E+ ++F +M + P +
Sbjct: 61 KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAG 278
Y ++++ K G++D A+++ + + +G
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSG 154
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 115/240 (47%), Gaps = 11/240 (4%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVV 95
Y V+ + ID + +++ L + R+ S Y+ D + E+
Sbjct: 122 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEE----ARELF 177
Query: 96 QIASP--ESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLK--CKPDLITYNIVLDILGRV 151
++A+ + +IV I K+ ++++A + H+K ++ C PD ++YN+++ L +
Sbjct: 178 EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAV--HVKMIEAGCAPDPVSYNVIIYSLCKD 235
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK-PDLLT 210
RV++ E +P L++ L K RR++ + M E+G + P ++T
Sbjct: 236 NRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVT 295
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y+A+ID + ++++ + M++ P + Y ++ID K+G++D A +F+ M+
Sbjct: 296 YSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMH 355
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 5 YIEKLCKAGNVSAA----VRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLL 60
+I LCKAG + A V+++++ + P +YN ++ + + N + + +++ +
Sbjct: 193 FISGLCKAGKLDEAKAVHVKMIEAGCAPD---PVSYNVIIYSLCKDNRVSEAKELMDQAM 249
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS-PESIIVVNRIIFAFAKSRQI 119
T + + + +E +++ S++ + +I K+ ++
Sbjct: 250 ERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRL 309
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
+ A ++ ++ C PD++TY ++D +VGR+++ F M E G D ++YN L
Sbjct: 310 DDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNIL 369
Query: 180 LNNLRKIRRLDLCLIYFREMGESGI 204
+ + ++D + EM GI
Sbjct: 370 IRGYCRAAKVDEAIAMIEEMAGRGI 394
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 33/213 (15%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ E++VQ + ++ + K+ + E+ IF+ + P+L+TY V++
Sbjct: 71 YFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYC 130
Query: 150 RVGRVNDMLNEFASMK---------------------------------EAGVVPDFISY 176
+ GR++ L+ +K AG V D I Y
Sbjct: 131 KAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQDVIVY 190
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ ++ L K +LD +M E+G PD ++Y +I S + + E+ L + +
Sbjct: 191 TSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAME 250
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ P + V L+D L K +V+ A I E M
Sbjct: 251 RKCMPGVPVCTVLVDGLCKSRRVEEACVILERM 283
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 54 QILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
+++K L + ++ + NF I ++ + I +E+V E++ N ++ A
Sbjct: 189 EVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHAL 248
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN---DMLNEFASMKEAGVV 170
K ++++AL +F I P+++T+N+++D ++G ++ ++ + M +
Sbjct: 249 CKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIK 308
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ ++YN+L++ KI + + EM + I+P++ TY +I+ + R G +EE+LRL
Sbjct: 309 PNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRL 368
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++M ++ + P+ VY S++ L G VD A +F +M+
Sbjct: 369 CDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMS 408
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLR--DKNIFLPNA--YNCVLVASAETNDIDLSFQILKD 58
N ++ CK G++ A++L++ + PN+ YN ++ + I ++ ++ +
Sbjct: 277 NMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNE 336
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ + Y + + L +E+V+ + +V N I+
Sbjct: 337 MMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGD 396
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ A L+F + + D T +I+ L R G + L + E ++ D S+N
Sbjct: 397 VDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNI 456
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N L K M G+ PD++T+ LID + GNIE ++++++ M + +
Sbjct: 457 LINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGE 516
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+P++ VY S+I+ L K G VD+A ++ +
Sbjct: 517 EKPNLLVYNSIINGLCKDGLVDVARSLVD 545
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 35/254 (13%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLV 61
C+ LC+ G ++ A++ L + + N L+ A +++I ++F +
Sbjct: 419 CSILTRGLCRNGYITTALKFLNQVLENN----------LIEDAFSHNILINFLCKSNNFA 468
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++R L AR ++ + +VV + +I K IE
Sbjct: 469 AARQL-------LARMYVRG--------LVPDVVTFGT---------LIDGHCKEGNIES 504
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ ++D + + KP+L+ YN +++ L + G V+ + ++ G+V D I+YNTL+N
Sbjct: 505 AVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV-DTITYNTLIN 563
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
+ D M +GI TY +I + G ++E+ L M + P
Sbjct: 564 GYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLP 623
Query: 242 SIYVYRSLIDNLKK 255
YR+L+ N+ K
Sbjct: 624 DNITYRTLVININK 637
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 9/220 (4%)
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQ-----LLIFIEEVVQIASPESI----IVVNRI 109
L V R L S + N +M D + L + + ++I S SI + N +
Sbjct: 258 LSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSL 317
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV 169
I F K I A + + + + +P++ TY +++ R G + + L M E G+
Sbjct: 318 IDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGL 377
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
+P+ + YN++++ L +D + F +M + I D T + L R G I +L+
Sbjct: 378 LPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALK 437
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
N + + + + + LI+ L K A + M
Sbjct: 438 FLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARM 477
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 114/272 (41%), Gaps = 4/272 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ CK G ++ A L + +I PN Y ++ + ++ + ++ +++
Sbjct: 315 NSLIDGFCKIGGITVAEELRNEMMKIDI-EPNVRTYATMIEGYSRAGCLEEALRLCDEMV 373
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+S Y + M D + ++ P + + ++ I
Sbjct: 374 ERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYIT 433
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + + D ++NI+++ L + A M G+VPD +++ TL+
Sbjct: 434 TALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLI 493
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K ++ + + +M + KP+LL Y ++I+ + G ++ + L + +++ +
Sbjct: 494 DGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV 553
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+I Y +LI+ GK D A + M ++
Sbjct: 554 DTI-TYNTLINGYFNCGKFDKAFKLSTLMQNA 584
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 127/242 (52%), Gaps = 10/242 (4%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYT-----NFARAFIMTDDCTQLLIF 90
YN L + D+D + ++ ++L R + D +T + AR + D + +
Sbjct: 179 YNVTLKVFRKGRDLDKAEKLFDEML--ERGVKPDNFTFSTIISCARLCNLADKAVE---W 233
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
E++ + ++ +I ++ ++ +EKAL ++D + + + D ++ ++ I
Sbjct: 234 FEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKV 293
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G + LN + MK GV P+ + YN LL+ + + +R +++++ ++G+ P +T
Sbjct: 294 AGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVT 353
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y AL+ ++GR E++ +++ +MK++ + ++ +Y S++ +G VD A+ IFE+M
Sbjct: 354 YAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMK 413
Query: 271 SS 272
SS
Sbjct: 414 SS 415
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 79/147 (53%)
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L +++ +K L KP+L+ YNI+LD +GR R + + + + G+ P F++Y LL+
Sbjct: 301 LNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHA 360
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ R + +REM E G+ +++ Y +++ G++++++ +F DMK I+P
Sbjct: 361 YGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPD 420
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + S+I GKV A EM
Sbjct: 421 SWTFSSMITIFSCCGKVSEAENTLNEM 447
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 132 LKCKPDLITYNIVLDILGRVGRVNDMLNE-FASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
LK +++ YN+ L + R GR D + F M E GV PD +++T+++ R D
Sbjct: 170 LKFNREVVVYNVTLKVF-RKGRDLDKAEKLFDEMLERGVKPDNFTFSTIISCARLCNLAD 228
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ +F +M G++PD +T + +IDS+GR GN+E++L L++ + + R + +LI
Sbjct: 229 KAVEWFEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLI 288
Query: 251 DNLKKMGKVDLAMTIFEEMNS 271
K G D + ++EEM +
Sbjct: 289 RIYKVAGNFDGCLNVYEEMKA 309
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%)
Query: 66 LSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
L + ++ R + + + L EE+ + ++++ N ++ A ++++ +
Sbjct: 279 LDATAFSTLIRIYKVAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKF 338
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ I P +TY +L GR D + MKE G+ + + YN++L
Sbjct: 339 YQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCAD 398
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
+ +D + F +M SGIKPD T++++I F G + E+ N+M + +P+I++
Sbjct: 399 LGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEMFEAGFQPNIFI 458
Query: 246 YRSLIDNLKKMGKVDLAMTIF 266
SLI K ++D + F
Sbjct: 459 LTSLIQCYGKAQRIDDVVNTF 479
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 77/156 (49%)
Query: 86 QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
Q+ F ++++ S + ++ A+ ++R E A I+ +K +++ YN +L
Sbjct: 334 QVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSIL 393
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ +G V+ + F MK +G+ PD ++++++ ++ EM E+G +
Sbjct: 394 AMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEMFEAGFQ 453
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
P++ T+LI +G+ I++ + FN + + I P
Sbjct: 454 PNIFILTSLIQCYGKAQRIDDVVNTFNRIFELVITP 489
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++++ N I+ A ++KA+ IF+ +K KPD T++ ++ I G+V++ N
Sbjct: 385 NVVLYNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTL 444
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M EAG P+ +L+ K +R+D + F + E I PD L++ +T
Sbjct: 445 NEMFEAGFQPNIFILTSLIQCYGKAQRIDDVVNTFNRIFELVITPDDRFCGCLLNVMTQT 504
Query: 222 GNIE 225
N E
Sbjct: 505 PNEE 508
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 2/268 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L AG V+ A L P AYN +L + + Q+L ++
Sbjct: 270 ISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCG 329
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ A+ I ++E+ S V +RI+ F +KA
Sbjct: 330 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAF 389
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ +PD YN+++D G+ + ++ F M+E G+ PD +++NTL++
Sbjct: 390 AVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAH 449
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R D F EM ES P TY +I+ G + E + ++MK+Q + P+I
Sbjct: 450 CKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNI 509
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +L+D + G+ A+ E M +
Sbjct: 510 ITYTTLVDVYGRSGRYKEAIDCIEAMKA 537
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 19 VRLLQSLRDKNIFLPN--AYNCVLVA---SAETNDIDLSFQILKDL----LVSSRTLSSD 69
+RLL LR+ + FLP+ +Y+ +L + + + D L ++L DL L L SD
Sbjct: 175 LRLLSLLREHD-FLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 70 CYTNFARAFI------------------MTDDCTQLLIFIEEVVQIASPESIIV------ 105
+ FARA + ++ T L+ + ++A E++ +
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293
Query: 106 --------VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
N ++ + + ++ A + D + PD TY++++D R GR
Sbjct: 294 EIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M+ GV P ++ +L R REM SG++PD Y +ID+
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDT 413
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
FG+ + ++ FN M+++ I P + + +LID K G+ D A +FEEM S
Sbjct: 414 FGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRES 468
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
++ +AG +A LL+ + + P++Y + +L + D +F +L+++ S
Sbjct: 341 VDAYTRAGRWESARILLKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + ++ + ++ N +I A K + ++A
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAA 459
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ ++ C P TYNI++++LG + + MKE G+VP+ I+Y TL++
Sbjct: 460 ELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R + M G+KP Y AL++++ + G + +L + MK + SI
Sbjct: 520 GRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSI 579
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
V SLI+ + +V A ++ + M
Sbjct: 580 LVLNSLINAFGEDRRVVEAFSVLQFM 605
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
EE+ + P N +I + E + +K P++ITY ++D+ G
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R GR + ++ +MK G+ P Y+ L+N + D L + M G++ +L
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSIL 580
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+LI++FG + E+ + M++ +RP + Y +L+ L ++ + D I+EEM
Sbjct: 581 VLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEM 640
Query: 270 NSS 272
+S
Sbjct: 641 ITS 643
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 5/209 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP---NAYNCVLVASAETNDIDLSFQILKD 58
N I+ CK G A L + +R+ N P YN ++ E + +L +
Sbjct: 442 WNTLIDAHCKGGRHDRAAELFEEMRESNC--PPGTTTYNIMINLLGEQEHWEGVEAMLSE 499
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + YT + + + + IE + S + + ++ A+A+
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ AL + +K + ++ N +++ G RV + + M+E G+ PD I+Y T
Sbjct: 560 ADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTT 619
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L+ L ++ + D + + EM SG PD
Sbjct: 620 LMKALIRVEQFDKVPVIYEEMITSGCAPD 648
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SI+V+N +I AF + R++ +A + ++ +PD+ITY ++ L RV + + + +
Sbjct: 578 SILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIY 637
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRL 189
M +G PD + L + L+ I+ +
Sbjct: 638 EEMITSGCAPDRKARAMLRSGLKYIKHM 665
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ C+ G+V A+ + + ++ + PN +N V+ ET ++D + ++ ++
Sbjct: 367 VNAYCQEGDVKKAILTTEQMEERGL-EPNRITFNTVISKFCETGEVDHAETWVRRMVEKG 425
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + + Y + + + F++E+ + ++I +I K R++ A
Sbjct: 426 VSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAE 485
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + G P+ YN++++ + ++ D F M ++G+ ++YNTL+N L
Sbjct: 486 IVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGL 545
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R+ F +M G PD++TY +LI + ++ N ++ L L++ MK I+P++
Sbjct: 546 GRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTV 605
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LI +K G V + +F+EM
Sbjct: 606 GTFHPLIYACRKEGVVTMD-KMFQEM 630
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
M D+ T L + + + S S VNR++ SR EK L +F + +PD +
Sbjct: 102 MLDEATDLYSTMRKDGFVPSTRS---VNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAV 158
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
Y + + ++ SM + G+ P +YN +L L K+RR+ F EM
Sbjct: 159 AYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM 218
Query: 200 GESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
+ + P+ +TY LID + + G IEE+L MK+Q + ++ Y SL++ L G+V
Sbjct: 219 IQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRV 278
Query: 260 DLAMTIFEEMNSS 272
D A + EM S
Sbjct: 279 DDAREVLLEMEGS 291
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 6/267 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N + LC +G V A +L + FLP + + D K++ +
Sbjct: 266 NSLLNGLCGSGRVDDAREVLLEMEGSG-FLPGGFLSFVFDDHSNGAGDDGLFDGKEIRID 324
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
RT Y + + ++V+ S I N ++ A+ + ++KA
Sbjct: 325 ERT-----YCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKA 379
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+L + ++ +P+ IT+N V+ G V+ M E GV P +YN+L+N
Sbjct: 380 ILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLING 439
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ C + EM ++GIKP++++Y +LI+ + + ++ + DM + + P+
Sbjct: 440 YGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPN 499
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y LI+ + K+ A F+EM
Sbjct: 500 AEIYNMLIEASCSLSKLKDAFRFFDEM 526
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 31/282 (10%)
Query: 18 AVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFA 75
A L ++R K+ F+P+ + N +L ++ + + + D++ S + Y
Sbjct: 106 ATDLYSTMR-KDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164
Query: 76 RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCK 135
+A +M D + ++ +V+ S+ N ++ K R+I+ A +FD +
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P+ +TYN ++D +VG + + L MKE V + ++YN+LLN L R+D
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284
Query: 196 FREMGESGIKP----------------------------DLLTYTALIDSFGRTGNIEES 227
EM SG P D TY L++ R G IE++
Sbjct: 285 LLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKA 344
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + + + PS Y L++ + G V A+ E+M
Sbjct: 345 EEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 111/240 (46%), Gaps = 5/240 (2%)
Query: 33 PNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLL-I 89
PNA YN ++ AS + + +F+ +++ S + Y + +
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL 557
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F++ + +P+ +I N +I +AKS +K L ++D +K L KP + T++ ++
Sbjct: 558 FLQMAGKGCNPD-VITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACR 616
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G V M F M + +VPD YN ++ + + + + ++M + G+ D +
Sbjct: 617 KEGVVT-MDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKV 675
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +LI ++ R + E L +DMK + + P + Y LI L + + A + EM
Sbjct: 676 TYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREM 735
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLKCKPDLITYNIVLDILG 149
+E++Q+ V N +I+++A+ + KA+ + + +G+ C D +TYN ++
Sbjct: 628 QEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDC--DKVTYNSLILAYL 685
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R RV+++ + MK G+VP +YN L+ L ++ + ++REM E G+ ++
Sbjct: 686 RDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVS 745
Query: 210 TYTALIDSFGRTGNIEES 227
LI G + E+
Sbjct: 746 MCYQLISGLREEGMLREA 763
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 127/268 (47%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCKA ++ A L++ + ++ F PNA +N ++ A + ++ ++ +
Sbjct: 17 VDGLCKANRLTDAFELVEVMAERGCF-PNALVFNGIMDALCKEGRSAEAYGYIETMRSMG 75
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y F + + L ++E+ + + N + K +++ AL
Sbjct: 76 VSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDAL 135
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + K + D+ Y ++D L + G++ + + M+ +G VP YN +L+ L
Sbjct: 136 ALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWL 195
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R++ F+ M SGI PD LT+ ++ + R I+++L L MK + P
Sbjct: 196 CKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPRE 255
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+Y +LID L + G+V A + +EM S
Sbjct: 256 VIYNTLIDALNRAGRVSEAYRLLQEMIS 283
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 90/171 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ ++ K+ ++ A + + + C P+ + +N ++D L + GR +
Sbjct: 9 TVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYI 68
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+M+ GV P ++YN L++ K +L L +EM G +P+ +TY + +
Sbjct: 69 ETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY 128
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
G ++++L LF M +++IR +Y Y +LID L + GK+ A ++ +EM +S
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS 179
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 108/246 (43%), Gaps = 3/246 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NG ++ LCK G + A ++++R + P YN ++ + + + +IL+++
Sbjct: 49 NGIMDALCKEGRSAEAYGYIETMRSMGVS-PTIVTYNILIDGFCKEEKLHRALEILQEMT 107
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y F L + + + +I ++ ++
Sbjct: 108 GRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLA 167
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A + D ++ C P YN +L L + R+N+ F M +G++PD++++ ++
Sbjct: 168 EAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMV 227
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ R+D L+ ++M +G+ P + Y LID+ R G + E+ RL +M + +
Sbjct: 228 FGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLS 287
Query: 241 PSIYVY 246
P+ Y
Sbjct: 288 PNSRTY 293
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%)
Query: 85 TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIV 144
T +E + + + +V N I+ A K + +A + ++ + P ++TYNI+
Sbjct: 27 TDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTIVTYNIL 86
Query: 145 LDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+D + +++ L M G P+ ++YNT L+ L K ++D L FR M E I
Sbjct: 87 IDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKI 146
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
+ D+ YT LID + G + E+ L ++M+ P Y +++ L K +++ A
Sbjct: 147 RLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHK 206
Query: 265 IFEEMNSS 272
+F+ M S
Sbjct: 207 LFKRMTGS 214
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C P ++T+ I++D L + R+ D M E G P+ + +N +++ L K R
Sbjct: 6 CIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAY 65
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
Y M G+ P ++TY LID F + + +L + +M + P+ Y + + L
Sbjct: 66 GYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGL 125
Query: 254 KKMGKVDLAMTIFEEMN 270
K GKVD A+ +F M
Sbjct: 126 CKYGKVDDALALFRAMT 142
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 3/209 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ CK + A+ +LQ + + PN YN L + +D + + + +
Sbjct: 87 IDGFCKEEKLHRALEILQEMTGRG-HEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKK 145
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L YT + ++E+ N I+ K +I +A
Sbjct: 146 IRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAH 205
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F + G PD +T+ +++ R R++D L MK AG+ P + YNTL++ L
Sbjct: 206 KLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDAL 265
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ R+ +EM G+ P+ TY
Sbjct: 266 NRAGRVSEAYRLLQEMISRGLSPNSRTYA 294
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M E G +P +++ L++ L K RL M E G P+ L + ++D+ + G
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
E+ M+ + P+I Y LID K K+ A+ I +EM
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTG 108
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G+V+ A L + + I P+ YNCV+ A + +D + IL+ ++
Sbjct: 220 NTVIDGFFKEGDVNKACDLFNEMVQRGIS-PDLSTYNCVVNALCKARAMDKAEAILRQMV 278
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y + + T + + +++ ++ +N ++ + K +I+
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIK 338
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A +FD + K D+ +Y I+L+ G + D+ F M G+ PD +N L+
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLI 398
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
K LD I F EM E G++PD++TY+ +I + R G +++++ FN M Q +
Sbjct: 399 KAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVA 458
Query: 241 PSIYVYRSLIDNLKKMG 257
PSI Y LI G
Sbjct: 459 PSISTYHFLIQGFCTHG 475
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
G C P+ + YN V+D + G VN + F M + G+ PD +YN ++N L K R +D
Sbjct: 209 GAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMD 268
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
R+M + G+ PD TY +LI + TG +E++R+ M Q I P + SL+
Sbjct: 269 KAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLM 328
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+L K GK+ A +F+ M
Sbjct: 329 ASLCKHGKIKDARDVFDSM 347
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F + + Q +P SI + +I F + KA + + +PD+ +N +++ L
Sbjct: 449 FNQMIDQGVAP-SISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLC 507
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++GRV D N F G+ P+ + YNTL++ + +++ L F M +GI+P+++
Sbjct: 508 KLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVV 567
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L++ + + G I+E L LF ++ + I+PS +Y ++ L + G+ A F EM
Sbjct: 568 VYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEM 627
Query: 270 NSS 272
S
Sbjct: 628 TES 630
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ K G + A + +R++ + P+ Y+ V+ A +D + + ++
Sbjct: 395 NVLIKAYAKCGMLDRATIIFNEMREQGV-EPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
S Y + F D + + +++ I N II K ++
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A IFD + P+++ YN ++D VG++ + L F M AG+ P+ + Y TL+
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N K+ R+D L FRE+ GIKP Y ++ + G + F++M + I
Sbjct: 574 NGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIA 633
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y Y ++ L K D A+ +F+E+++
Sbjct: 634 MDRYTYSIVLGGLFKNSCSDEAILLFKELHA 664
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y F D + E+VQ + N ++ A K+R ++KA I +
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV 278
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
PD TYN ++ G+ + + M G++PD ++ N+L+ +L K ++
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIK 338
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
F M G K D+ +Y +++ + G + + LFN M I P +++ LI
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLI 398
Query: 251 DNLKKMGKVDLAMTIFEEM 269
K G +D A IF EM
Sbjct: 399 KAYAKCGMLDRATIIFNEM 417
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++V ++ + K +I++ L +F I KP YNI+L L + GR +F
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKF 624
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M E+G+ D +Y+ +L L K D ++ F+E+ +K D+ T +I +
Sbjct: 625 HEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQI 684
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+EE+ LF + + + PS+ Y ++ NL K G V+ A +F M ++
Sbjct: 685 RRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENA 735
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 79 IMTDDCTQ------LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH-IKG 131
I+ D CT+ L F +V++ I+++ ++ ++++ +AL I H +
Sbjct: 113 ILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPH 172
Query: 132 LKCKPDLITYNIVLDILG---RVGRVNDMLNEFASMKEAGVV--PDFISYNTLLNNLRKI 186
L C PD+ +Y IVL L + G+ +++L M E G V P+ ++YNT+++ K
Sbjct: 173 LGCVPDVFSYCIVLKSLCSDRKSGQADELLR---MMAEGGAVCLPNAVAYNTVIDGFFKE 229
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
++ F EM + GI PDL TY ++++ + ++++ + M + + P + Y
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289
Query: 247 RSLIDNLKKMGKVDLAMTIFEEMNS 271
SLI G+ A+ + ++M S
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTS 314
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 90/179 (50%)
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
+ I +++V N ++ + ++E AL +FD + +P+++ Y +++ +VGR
Sbjct: 522 TISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGR 581
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
+++ L+ F + G+ P YN +L+ L + R + F EM ESGI D TY+
Sbjct: 582 IDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSI 641
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ + +E++ LF ++ ++ I +I + ++ +V+ A +F ++ S
Sbjct: 642 VLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRS 700
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 18/239 (7%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVA---SAETNDIDLSFQI 55
+ NGY CK G + + L + + K I P+ YN +L + T + F
Sbjct: 572 LVNGY----CKVGRIDEGLSLFREILHKGI-KPSTTLYNIILHGLFQAGRTVPAKVKFHE 626
Query: 56 LKDLLVSSRTLSSDCYT-NFARAFIMTDDCT-QLLIFIEEVVQIASPESIIVVNRIIFAF 113
+ + ++ D YT + + + C+ + ++ +E+ + I +N +I
Sbjct: 627 MTE-----SGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGM 681
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV-VPD 172
+ R++E+A +F I P ++TY+I++ L + G V + + F+SM+ AG P+
Sbjct: 682 FQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPN 741
Query: 173 FISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
N ++ L + R + Y ++ E D T T LID F G E +R
Sbjct: 742 SQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTCREHIRFL 800
>gi|326518288|dbj|BAJ88173.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527987|dbj|BAJ89045.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 84 CTQLLIFIEEVVQIASPESIIVVNRIIFA-----FAKSRQIEKALLIFDHIKGLKCKPDL 138
C Q +E ++ SP S ++ + + ++ +A+ R E+ L +FD +G KPD
Sbjct: 223 CRQFAKAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDH 282
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+ + ++ + G G + + F M+E G P+ YN LL L K + L F E
Sbjct: 283 VAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKPGLARNLFEE 342
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M G++P+ T TA+ +GR ++L+L++ M++++I + +L+ +G
Sbjct: 343 MTAEGVEPNARTLTAVAKIYGRARWGRDALQLWDQMREKKIPADSILCNTLLSMCADVGL 402
Query: 259 VDLAMTIFEEM-NSSLSDLAGPKDFKRKA 286
V A +FEEM + L+D+ P + A
Sbjct: 403 VAEAEQLFEEMKDPDLTDVPQPDKWSYTA 431
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 43/193 (22%)
Query: 121 KALLIFDHIKGLKCKP----DLITYNIVLDILGRVGRVNDMLNEFA-SMKEAGVVPDFIS 175
K L + +++GL D I +N+ L L R R D A M ++GV D I+
Sbjct: 154 KTLSLLAYLRGLPADAGFAVDTILFNVALKSL-RAARRWDEAERLALDMVDSGVPLDNIT 212
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESG--IKPDLLTYTALID----------------- 216
Y+TL+ R+ R+ + +F M G + PD +TY+A++D
Sbjct: 213 YSTLITAARRCRQFAKAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDR 272
Query: 217 ------------------SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
FG G+ + +F +M++ +P+I+VY +L++ L K GK
Sbjct: 273 ARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGK 332
Query: 259 VDLAMTIFEEMNS 271
LA +FEEM +
Sbjct: 333 PGLARNLFEEMTA 345
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV-- 170
+ ++R AL ++D ++ K D I N +L + VG V + F MK+ +
Sbjct: 362 YGRARWGRDALQLWDQMREKKIPADSILCNTLLSMCADVGLVAEAEQLFEEMKDPDLTDV 421
Query: 171 --PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD SY ++N I+ D L F EM +SGI+ ++++YT +I G+ I +++
Sbjct: 422 PQPDKWSYTAMINIYGSIKDADRALQLFVEMLQSGIEANIMSYTIVIQCLGKANRIRDAV 481
Query: 229 RLFNDMKQQQIRP 241
+ ++ ++P
Sbjct: 482 EVLEAGLERGLKP 494
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+AG D I +N L +LR RR D +M +SG+ D +TY+ LI + R
Sbjct: 168 DAGFAVDTILFNVALKSLRAARRWDEAERLALDMVDSGVPLDNITYSTLITAARRCRQFA 227
Query: 226 ESLRLFNDM--KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+++ F M + P Y +++D ++ + + +F+ S
Sbjct: 228 KAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGS 276
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 1/262 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSRTLS 67
LCK + A+++++ + I A LV+S ++ + Q++ + +
Sbjct: 107 LCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTN 166
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ Y + R M + TQ L ++ ++Q + + ++ A K R ++A + D
Sbjct: 167 TATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLD 226
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
I KP+L++YN++L L + GR D + F + G P+ +SYN LL +L
Sbjct: 227 EIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEG 286
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R + + EM P +TY LI S G E +L + +M + + +P+ Y
Sbjct: 287 RWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYN 346
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+I L K KVDL + ++M
Sbjct: 347 PIIARLCKDRKVDLVVKCLDQM 368
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 127/310 (40%), Gaps = 43/310 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LC GN++ +++LL L K + +PNA Y+ +L A+ + D + ++L +++
Sbjct: 171 NSLVRGLCMHGNLTQSLQLLDRLIQKGL-VPNAYTYSFLLEAAYKERGADEASKLLDEII 229
Query: 61 VSSRTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ Y T+D QL F E + SP +++ N ++ +
Sbjct: 230 AKGGKPNLVSYNVLLTGLCKEGRTEDAMQL--FRELPSKGFSP-NVVSYNILLRSLCNEG 286
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ E+A ++ + G + P +TYNI++ L GR L M A P SYN
Sbjct: 287 RWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYN 346
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL----------------------- 214
++ L K R++DL + +M P+ TY A+
Sbjct: 347 PIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQ 406
Query: 215 -----------IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
I S R GN + +L +M + P + Y SLI L G ++ A+
Sbjct: 407 HFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAI 466
Query: 264 TIFEEMNSSL 273
IF M ++
Sbjct: 467 EIFSVMEENI 476
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 9/265 (3%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G A++L + L K F PN +YN +L + + + +L ++ R+
Sbjct: 247 LCKEGRTEDAMQLFRELPSKG-FSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSP 305
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S+ Y + + L +EE+++ + N II K R+++ +
Sbjct: 306 STVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCL 365
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM--KEAGVVPDFISYNTLLNNLR 184
D + C P+ TYN + L G V + + S+ K+ +F Y ++ +L
Sbjct: 366 DQMMYRHCNPNEGTYNAIA-TLCEEGMVQEAFSIIQSLGNKQHFSTQEF--YKIVITSLC 422
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ EM + G PD TY++LI G + E++ +F+ M ++ I+
Sbjct: 423 RKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTE 481
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI K + DLA+ +FE M
Sbjct: 482 NYNSLILGCCKSRRTDLALDVFEIM 506
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 112/267 (41%), Gaps = 2/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ LC+ GNV A++L+ + + A YN ++ ++ S Q+L L+
Sbjct: 139 VSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGL 198
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
++ Y+ A + ++E++ +++ N ++ K + E A+
Sbjct: 199 VPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQ 258
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F + P++++YNI+L L GR + A M P ++YN L+ +L
Sbjct: 259 LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLT 318
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
R + L EM + KP +Y +I + ++ ++ + M + P+
Sbjct: 319 LHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEG 378
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y + I L + G V A +I + + +
Sbjct: 379 TYNA-IATLCEEGMVQEAFSIIQSLGN 404
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 88/181 (48%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E +V+ + ++++ K+ ++ KA+ + + + G PD +Y ++ L R
Sbjct: 85 LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G V + M+E G + +YN+L+ L L L + + G+ P+ T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y+ L+++ + +E+ +L +++ + +P++ Y L+ L K G+ + AM +F E+
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Query: 271 S 271
S
Sbjct: 265 S 265
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ + + + A+ + D ++ + TYN ++ L G + L + + G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+VP+ +Y+ LL K R D E+ G KP+L++Y L+ + G E+++
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+LF ++ + P++ Y L+ +L G+ + A + EM+
Sbjct: 258 QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ND M E G PD LL +L K ++ + M SGI PD +YT
Sbjct: 77 RLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYT 136
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+ S R GN+ +++L + M++ + Y SL+ L G + ++ + + +
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC+ G V A ++QSL +K F Y V+ + + +FQ+L ++
Sbjct: 383 IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGF 442
Query: 65 TLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T S Y++ R M ++ ++ +EE +++ + N +I KSR+ +
Sbjct: 443 TPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTEN----YNSLILGCCKSRRTDL 498
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLD 146
AL +F+ + G + TY I+++
Sbjct: 499 ALDVFEIMVGKGYLANETTYTILVE 523
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 131/270 (48%), Gaps = 12/270 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETN---DIDLSF--QILKD 58
I + G AV L +S+ + +PN YN ++ A A+ D+ + F +++ +
Sbjct: 255 ISAFGRNGRFPDAVDLFRSMSSWGV-VPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIAN 313
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
L+ R L+ + + + M + +LL ++ + + N + K+ Q
Sbjct: 314 GLMPDR-LTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPD---VFTYNTYLDTLCKAGQ 369
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
I+ A +F+ + + P+++TY+ ++D + + D LN + MK V D +SYNT
Sbjct: 370 IDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNT 429
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ K+ LD + +EM SGI D++TY AL+ +G+ G +E RLF +MK +
Sbjct: 430 LVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARN 489
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
I P+ Y ++ID K AM ++ E
Sbjct: 490 IYPNTLTYSTMIDMYTKGEMFQEAMDVYRE 519
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Query: 102 SIIVVNRIIFAFAKSR-QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
++I N II A AK + + +D + PD +TYN +L + G
Sbjct: 282 NVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKL 341
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ M +VPD +YNT L+ L K ++DL F EM + P+++TY+A++D + +
Sbjct: 342 LSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAK 401
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E++L L+ +MK + + Y +L+ +K+G +D A+ +EM S
Sbjct: 402 ANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERS 453
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVN-DMLNEFA-SMKE 166
+I AF ++ + A+ +F + P++ITYN ++D G G V+ D++ +F M
Sbjct: 254 MISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDA-GAKGEVSFDVVVKFYDEMIA 312
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G++PD ++YN+LL+ ++ EM I PD+ TY +D+ + G I+
Sbjct: 313 NGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDL 372
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ R+F +M +++ P++ Y +++D K ++ A+ ++EEM
Sbjct: 373 ARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEM 415
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 120/251 (47%), Gaps = 38/251 (15%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y++ LCKAG + A R+ + + K ++ PN Y+ ++ A+ N ++ + + +++
Sbjct: 358 NTYLDTLCKAGQIDLARRVFEEMSSKRVW-PNVVTYSAMMDGYAKANLLEDALNLYEEMK 416
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ S L Y + + L ++E ++ K +++E
Sbjct: 417 LRSVCLDRVSYNTLVGIY-------EKLGNLDEAIE------------------KCKEME 451
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
++ + D++TYN +L G+ G +++ F MK + P+ ++Y+T++
Sbjct: 452 RSGI----------NRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMI 501
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K + +RE + ++ D++ Y+A+ID+ + G +E S+ L M ++ I+
Sbjct: 502 DMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIK 561
Query: 241 PSIYVYRSLID 251
P++ + S+ID
Sbjct: 562 PNVVTFNSIID 572
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 90/168 (53%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ + ++ +AK+ +E AL +++ +K D ++YN ++ I ++G +++ + +
Sbjct: 388 NVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKC 447
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M+ +G+ D ++YN LL+ K D F EM I P+ LTY+ +ID + +
Sbjct: 448 KEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKG 507
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E++ ++ + K ++ + Y ++ID L K G ++ ++ + M
Sbjct: 508 EMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAM 555
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 42/199 (21%)
Query: 113 FAKSRQIEKALLIFDHI----KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
F +R + A FD I G K L++ ++ LGR+G +N L F + G
Sbjct: 186 FGNTRSLLHAKKCFDFIMSKQNGRVDKGKLVS--AMIGTLGRLGEINLALGLFERARLEG 243
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR-------- 220
S++ +++ + R + FR M G+ P+++TY ++ID+ +
Sbjct: 244 YGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVV 303
Query: 221 ----------------------------TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDN 252
G E + +L ++M + I P ++ Y + +D
Sbjct: 304 VKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDT 363
Query: 253 LKKMGKVDLAMTIFEEMNS 271
L K G++DLA +FEEM+S
Sbjct: 364 LCKAGQIDLARRVFEEMSS 382
>gi|341605689|gb|AEK82947.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 91/165 (55%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G D ++Y+ ++N L K R++ L YF+ +G+ + + Y++LID G+ G I
Sbjct: 79 IDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E+ RLF +M ++ Y Y +LID L K GKVB AMT+F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRM 183
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + K D++TY+ V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L++ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVBEAMTLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G K D++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMN 270
ID L K G++D A +FEEM+
Sbjct: 129 IDGLGKAGRIDEAERLFEEMS 149
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + + + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQ 111
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y + F MT+ L+ +EE+ I N +I K+ ++ + +F +K
Sbjct: 13 YNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRLFGEMK 72
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
C PD+ITY+ ++ ++ R+N F M + +PD +++ TL+ +D
Sbjct: 73 AKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVD 132
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
E+ S PD+ TYT+L+D F + + E+ R+ M + + +P++ +Y +LI
Sbjct: 133 DAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALI 192
Query: 251 DNLKKMGKVDLAMTIFEEM 269
D GK +A + EEM
Sbjct: 193 DAFCSAGKPTVAYKLLEEM 211
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 88/168 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N +I F + ++ LL+ + + C PD+ TYN ++D L + GRV ++ F
Sbjct: 9 NMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRLF 68
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK PD I+Y+ L+ K+ R+++ F +M + PD++T+ L++ +
Sbjct: 69 GEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNA 128
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G ++++ RL ++ P +Y Y SL+D K+ ++ A + + M
Sbjct: 129 GLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRM 176
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 120/276 (43%), Gaps = 10/276 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP--NAYNCV---LVASAETNDIDLSFQILK 57
N I C V + + L++ + LP N YN + L + +++ F +K
Sbjct: 14 NSLIHGFCMTNGVDSTLLLMEEMTATGC-LPDINTYNTLIDGLCKTGRVPEVNRLFGEMK 72
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ ++ C F D +++++ A+ ++ ++ + +
Sbjct: 73 AKFCNPDVITYSCLIG---GFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAG 129
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ A + + I C PD+ TY ++D +V R+ + M + P+ + Y
Sbjct: 130 LVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYT 189
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQ 236
L++ + + EM +G++P+ +TY +LI F TG++EE+ ++ + +
Sbjct: 190 ALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLERN 249
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ + ++ YR ++D L + G++ A+ + E + S
Sbjct: 250 ENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 285
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G+ P+ ++YN+L++ +D L+ EM +G PD+ TY LID +TG + E
Sbjct: 5 GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
RLF +MK + P + Y LI K+ ++++A T+F++M ++L D+
Sbjct: 65 NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDV 115
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%)
Query: 135 KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLI 194
+P+++TYN ++ V+ L M G +PD +YNTL++ L K R+
Sbjct: 7 EPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNR 66
Query: 195 YFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLK 254
F EM PD++TY+ LI F + I + LF+DM +Q P + + +L++
Sbjct: 67 LFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYC 126
Query: 255 KMGKVDLAMTIFEEMNSS 272
G VD A + EE+ +S
Sbjct: 127 NAGLVDDAERLLEEIVAS 144
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 10/254 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G V RL ++ K P+ Y+C++ + + I+++ + D+L
Sbjct: 49 NTLIDGLCKTGRVPEVNRLFGEMKAK-FCNPDVITYSCLIGGFCKLDRINMACTLFDDML 107
Query: 61 VSSRTLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ + + + DD +LL EE+V + ++ F K +
Sbjct: 108 KQAALPDVVTFPTLVEGYCNAGLVDDAERLL---EEIVASDCSPDVYTYTSLVDGFCKVK 164
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A + + +C+P+++ Y ++D G+ M GV P+ I+Y
Sbjct: 165 RMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYR 224
Query: 178 TLLNNLRKIRRLDLCLIYFREMGES-GIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+L+ L+ + + K D+ Y ++D RTG + +L L +KQ
Sbjct: 225 SLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 284
Query: 237 QQIRPSIYVYRSLI 250
P +Y +LI
Sbjct: 285 SGTPPRHDIYVALI 298
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 34/240 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
+E C AG V A RLL+ + A +C T+ +D F +K ++ + R
Sbjct: 122 VEGYCNAGLVDDAERLLEEIV--------ASDCSPDVYTYTSLVD-GFCKVKRMVEAHRV 172
Query: 66 LS----SDC------YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
L +C YT AF T +EE+V + I +I F
Sbjct: 173 LKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCG 232
Query: 116 SRQIEKALLIFDHI-KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+ +E+A + + + + CK D+ Y +++D L R GR++ L ++K++G P
Sbjct: 233 TGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHD 292
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
Y L+ + R +P+ Y A+I R G E++ L +++
Sbjct: 293 IYVALIRGEMTLSRKG--------------RPNAKVYEAVIQELAREGRHEKANALSDEL 338
>gi|326495542|dbj|BAJ85867.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 84 CTQLLIFIEEVVQIASPESIIVVNRIIFA-----FAKSRQIEKALLIFDHIKGLKCKPDL 138
C Q +E ++ SP S ++ + + ++ +A+ R E+ L +FD +G KPD
Sbjct: 223 CRQFAKAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGSGWKPDH 282
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+ + ++ + G G + + F M+E G P+ YN LL L K + L F E
Sbjct: 283 VAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKPGLARNLFEE 342
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
M G++P+ T TA+ +GR ++L+L++ M++++I + +L+ +G
Sbjct: 343 MTAEGVEPNARTLTAVAKIYGRARWGRDALQLWDQMREKKIPADSILCNTLLSMCADVGL 402
Query: 259 VDLAMTIFEEM-NSSLSDLAGPKDFKRKA 286
V A +FEEM + L+D+ P + A
Sbjct: 403 VAEAEQLFEEMKDPDLTDVPQPDKWSYTA 431
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 43/193 (22%)
Query: 121 KALLIFDHIKGLKCKP----DLITYNIVLDILGRVGRVNDMLNEFA-SMKEAGVVPDFIS 175
K L + +++GL D I +N+ L L R R D A M ++GV D I+
Sbjct: 154 KTLSLLAYLRGLPADAGFAVDTILFNVALKSL-RAARRWDEAERLALDMVDSGVPLDNIT 212
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESG--IKPDLLTYTALID----------------- 216
Y+TL+ R+ R+ + +F M G + PD +TY+A++D
Sbjct: 213 YSTLITAARRCRQFAKAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDR 272
Query: 217 ------------------SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
FG G+ + +F +M++ +P+I+VY +L++ L K GK
Sbjct: 273 ARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGK 332
Query: 259 VDLAMTIFEEMNS 271
LA +FEEM +
Sbjct: 333 PGLARNLFEEMTA 345
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV-- 170
+ ++R AL ++D ++ K D I N +L + VG V + F MK+ +
Sbjct: 362 YGRARWGRDALQLWDQMREKKIPADSILCNTLLSMCADVGLVAEAEQLFEEMKDPDLTDV 421
Query: 171 --PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD SY ++N I+ D L F EM +SGI+ ++++YT +I G+ I +++
Sbjct: 422 PQPDKWSYTAMINIYGSIKDADRALQLFVEMLQSGIEANIMSYTIVIQCLGKANRIRDAV 481
Query: 229 RLFNDMKQQQIRP 241
+ ++ ++P
Sbjct: 482 EMLEAGLERGLKP 494
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
+AG D I +N L +LR RR D +M +SG+ D +TY+ LI + R
Sbjct: 168 DAGFAVDTILFNVALKSLRAARRWDEAERLALDMVDSGVPLDNITYSTLITAARRCRQFA 227
Query: 226 ESLRLFNDM--KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+++ F M + P Y +++D ++ + + +F+ S
Sbjct: 228 KAVEWFERMYSPGSAVLPDEVTYSAVLDVYAQLRMKEEVLALFDRARGS 276
>gi|224576615|gb|ACN56981.1| At1g03560-like protein [Capsella rubella]
gi|224576617|gb|ACN56982.1| At1g03560-like protein [Capsella rubella]
gi|224576619|gb|ACN56983.1| At1g03560-like protein [Capsella rubella]
gi|224576621|gb|ACN56984.1| At1g03560-like protein [Capsella rubella]
gi|224576623|gb|ACN56985.1| At1g03560-like protein [Capsella rubella]
gi|224576627|gb|ACN56987.1| At1g03560-like protein [Capsella rubella]
gi|224576629|gb|ACN56988.1| At1g03560-like protein [Capsella rubella]
gi|224576635|gb|ACN56991.1| At1g03560-like protein [Capsella rubella]
gi|224576637|gb|ACN56992.1| At1g03560-like protein [Capsella rubella]
gi|224576647|gb|ACN56997.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ + +F+++ KP++ Y +++D + G V D + M + G PD ++Y+
Sbjct: 2 KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N L K R++ L YF+ +G + + Y++LID G+ G I+E+ RLF +M ++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y +LID L K GKVD AMT+F+ M
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 153
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 99/179 (55%), Gaps = 1/179 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 11 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 70
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + + Y++L++ L K R+D F EM E G D Y
Sbjct: 71 GRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 130
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ALID+ + G ++E++ LF M++++ ++Y Y LI + K + + A+ +++ M
Sbjct: 131 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMM 189
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 38/265 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQS-LRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSR 64
++ LC+ GN+S A++L Q L D +++ N + +S+ I+ D L R
Sbjct: 208 MKGLCRTGNISIALKLHQEMLNDSSLYGINF-----------KPVVISYSIIIDALCKDR 256
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
D+ L F E VQ +P ++I +++ E+A
Sbjct: 257 R---------------EDEARDL--FEEMKVQGMTP-TVISYTSLMW--------EEAKR 290
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F+ + +P+++T+N+++D+L + G+V + + M + G+VP+ ++YN+L+
Sbjct: 291 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 350
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ L+ F M G +PD++ YT LI+ + +T +EE+++L+N M Q RP +
Sbjct: 351 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +L+ L + GKV A +F M
Sbjct: 411 TYGALLTGLFQGGKVGDAKKLFGVM 435
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 10 CKAGNVSA--AVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
CK GN++A A + + N P +++ +L A+ F + + +S +
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSG--I 127
Query: 67 SSDCYT--NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
S DC T + + L + +++ I+ +I +I KA L
Sbjct: 128 SPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAAL 187
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVN-------DMLNEFASMKEAGVVPDFISYN 177
+F ++ L C P+ ITY ++ L R G ++ +MLN+ +S+ P ISY+
Sbjct: 188 LFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLND-SSLYGINFKPVVISYS 246
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+++ L K RR D F EM G+ P +++YT+L+ EE+ RLFN+M Q
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQ 298
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P++ + LID L K GKV A + E M
Sbjct: 299 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 330
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 38/269 (14%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G V A LL+ + + I +PN YN ++ F ++ DL
Sbjct: 308 NVLIDVLCKEGKVIEAKDLLEVMIQRGI-VPNLLTYNSLIEG----------FCLVGDL- 355
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
N AR +F+ + P+ +I +I + K+ ++E
Sbjct: 356 ------------NSARE-----------LFVSMPSKGCEPD-VICYTVLINGYCKTSKVE 391
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ +++ + + +PD+ TY +L L + G+V D F MK G+ D Y L
Sbjct: 392 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFL 451
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N L K L + F ++ IK D+ + LID + G +E + LF + Q++++
Sbjct: 452 NGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 511
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y +I + G+V A +F++M
Sbjct: 512 PDVVTYNIMIHEFCRGGQVVKANILFQKM 540
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 111/249 (44%), Gaps = 7/249 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N IE C G++++A L S+ K P+ Y ++ +T+ ++ + ++ +L
Sbjct: 343 NSLIEGFCLVGDLNSARELFVSMPSKGC-EPDVICYTVLINGYCKTSKVEEAMKLYNGML 401
Query: 61 VSSRTLSSDCYTNFARAFIMTDDC--TQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ Y + L + +V I P + + + K+
Sbjct: 402 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGI--PGDLYIYGIFLNGLCKNGC 459
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ +A+ +F+ +K K D+ +N ++D L + G++ F + + + PD ++YN
Sbjct: 460 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 519
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ + ++ I F++M ++G PD +TY LI F + +E+ + L + M Q+
Sbjct: 520 MIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRD 579
Query: 239 IRPSIYVYR 247
+ + + R
Sbjct: 580 VSLDVNILR 588
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 125/269 (46%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I C G AAV+LL + + P+ Y N ++ + + ++ ++ ++
Sbjct: 249 NSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMI 308
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
Y + ++ + +++V+ + ++I +I + K R ++
Sbjct: 309 KRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVD 368
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+++ + PD +TYN +LD L + GR + +M+ +G D I+YN LL
Sbjct: 369 EAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLL 428
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
++ K + D L F+ + E GI P++ TY L+D ++G ++ + +F + + +
Sbjct: 429 DDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQ 488
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+I Y +I L K G +D A + +M
Sbjct: 489 PNIRTYNIMIHGLCKEGFLDEAEALLYKM 517
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 5/273 (1%)
Query: 1 MCNG-YIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILK 57
+C G I LCK G A+++ ++ ++ PN YN V+ + +D + +
Sbjct: 176 VCYGTIINGLCKIGKTRDAIQMFPKMKKIRVY-PNLIMYNTVIDGLCKQGLVDEACGLCT 234
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE-VVQIASPESIIVVNRIIFAFAKS 116
+++ + L Y + F + ++E VV+ + N +I K
Sbjct: 235 EMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKL 294
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ +A + + KPD+++YN +++ G V + F M E +P+ ISY
Sbjct: 295 GRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISY 354
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
TL+N K+R +D ++ EM + PD +TY L+D ++G L M+
Sbjct: 355 CTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRA 414
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ Y L+D+ K K D A+ +F+ +
Sbjct: 415 SGQPADLITYNVLLDDYFKHEKFDKALALFQHI 447
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + L K +A V L L+ K P+ ++ ++ A A+ + +F +L ++L
Sbjct: 73 NKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNIL 132
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ T + + + + + E V + II K +
Sbjct: 133 KMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTR 192
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A+ +F +K ++ P+LI YN V+D L + G V++ M E G+ D SYN+++
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252
Query: 181 NNLRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
+ + R + EM G + PD+ T+ LID + G + E+ + M ++
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW 312
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+P I Y +L++ G V A +F++M
Sbjct: 313 KPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 12/278 (4%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDL 59
M N I+ LCK G V A L + + I L +YN ++ + ++L ++
Sbjct: 212 MYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEM 271
Query: 60 LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEE------VVQIASPESIIVVNRIIFAF 113
+V + + D YT I+ D +L E +++ I+ N ++ +
Sbjct: 272 VVRGK-VYPDVYT----FNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGY 326
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDF 173
S + +A +FD + P++I+Y +++ +V V++ + M +VPD
Sbjct: 327 CLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDT 386
Query: 174 ISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFND 233
++YN LL+ L K R M SG DL+TY L+D + + +++L LF
Sbjct: 387 VTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQH 446
Query: 234 MKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + I P+I Y L+D L K G++ A IF+ +++
Sbjct: 447 IIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSA 484
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 111/250 (44%), Gaps = 9/250 (3%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK G VS A ++ + + + P+ +YN ++ + + + Q+ ++ +
Sbjct: 288 IDGLCKLGRVSEAYNVVAVMIKRG-WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERT 346
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + + ++ + E+ + N ++ +KS ++L
Sbjct: 347 ALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKS---GRSL 403
Query: 124 LIFDHIKGLKCK---PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+D ++ ++ DLITYN++LD + + + L F + E G+ P+ +YN LL
Sbjct: 404 YEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILL 463
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L K RL F+ + G +P++ TY +I + G ++E+ L M
Sbjct: 464 DGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYL 523
Query: 241 PSIYVYRSLI 250
P+ + +++
Sbjct: 524 PNYITFDTIV 533
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 42/215 (19%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
NGY CK V A+ LL + +KN+ +P+ YNC+L
Sbjct: 359 NGY----CKVRMVDEAMVLLTEMHNKNL-VPDTVTYNCLL-------------------- 393
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
D + R+ D +E + P +I N ++ + K + +
Sbjct: 394 --------DGLSKSGRSLYEWD-------LVEAMRASGQPADLITYNVLLDDYFKHEKFD 438
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
KAL +F HI + P++ TYNI+LD L + GR+ F + G P+ +YN ++
Sbjct: 439 KALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMI 498
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+ L K LD +M + P+ +T+ ++
Sbjct: 499 HGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 100/203 (49%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
YT F + EE+ +I N +I + + + +F+ IK
Sbjct: 107 YTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIK 166
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
+C PD++T+N +L + G+ G +++ F MK AG VP+ ++NTL+++ + D
Sbjct: 167 TFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFD 226
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ ++ M E+G+ PDL +Y A++ + R G ++S ++ +MK + +P+ Y SL+
Sbjct: 227 QAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLL 286
Query: 251 DNLKKMGKVDLAMTIFEEMNSSL 273
+++ + EE+ S +
Sbjct: 287 HAYANGKEIERMCALAEEIYSGI 309
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 89/177 (50%)
Query: 93 EVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG 152
++V+ + ++ F K+ + + A+ IF+ ++ CKP++ T+N ++ + G G
Sbjct: 94 QMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRG 153
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
+ +M+ F +K PD +++NTLL+ + F+EM +G P+ T+
Sbjct: 154 KFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFN 213
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LI S+ R G+ ++++ ++ M + + P + Y +++ L + G + + EM
Sbjct: 214 TLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEM 270
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 152 GRVN--DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
GR++ D L M E G+ PD +Y TLL+ K + + F EM G KP++
Sbjct: 81 GRLSPPDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNIC 140
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+ ALI G G E +++F D+K Q P I + +L+ + G +F+EM
Sbjct: 141 TFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEM 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+E + SP+ I +N ++ + + + + KA I D +K P L TYN ++ +
Sbjct: 337 FLELRQRGFSPD-ITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYS 395
Query: 150 RVG---RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
R R ++L E + G+ PD ISYNT++ + R+ EM ESG P
Sbjct: 396 RSANFERSEEILREILA---KGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAP 452
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
D++TY I S+ E++ + M + +P+ Y S++D K+ + D A
Sbjct: 453 DIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEA 508
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
S+ N +++ +++S E++ I I +PD+I+YN V+ R GR+ D
Sbjct: 383 SLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVL 442
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
+ M+E+G PD I+YNT + + + M + G KP+ TY +++D + +
Sbjct: 443 SEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKL 502
Query: 222 GNIEESLRLFNDMKQ 236
+E+ N++++
Sbjct: 503 NRRDEASMFVNNLRK 517
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+M E GIKPD+ TYT L+ F + G + ++++F +M+ + +P+I + +LI G
Sbjct: 94 QMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRG 153
Query: 258 KVDLAMTIFEEMNS 271
K M +FE++ +
Sbjct: 154 KFTEMMKVFEDIKT 167
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 38/277 (13%)
Query: 11 KAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSS 68
KAG AAV++ + +R++ PN +N ++ ++ +D+ +
Sbjct: 116 KAGKDKAAVQIFEEMRNEGC-KPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDI 174
Query: 69 DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDH 128
+ F +++ +E+ + N +I ++++ ++A+ ++
Sbjct: 175 VTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKR 234
Query: 129 IKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN---NLRK 185
+ PDL +YN VL L R G A MK+ P+ ++Y +LL+ N ++
Sbjct: 235 MLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE 294
Query: 186 IRRL--------------------DLCLI------------YFREMGESGIKPDLLTYTA 213
I R+ L L+ F E+ + G PD+ T A
Sbjct: 295 IERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNA 354
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
++ +GR + ++ + + MK+ PS+ Y SL+
Sbjct: 355 MVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLM 391
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 73/164 (44%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ A+A ++IE+ + + I +P + ++ + + + + F +++ G
Sbjct: 285 LLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRG 344
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD + N +++ + + + M G P L TY +L+ + R+ N E S
Sbjct: 345 FSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSE 404
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ ++ + IRP I Y ++I + G++ A + EM S
Sbjct: 405 EILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRES 448
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
S GR + ++L L N M ++ I+P ++ Y +L+ +K GK A+ IFEEM
Sbjct: 79 SHGRL-SPPDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEM 130
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 129/266 (48%), Gaps = 11/266 (4%)
Query: 8 KLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
KLC+ A R+L+ + + I L P A+ CV+V+ + + + ++L L+ +
Sbjct: 210 KLCQG-----ARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLT--LMQKAGV 262
Query: 67 SSDCYTNFARAFIMTDDCT--QLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ +++ C + L F+E + I+ N +I + +IE AL
Sbjct: 263 EPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALE 322
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM-KEAGVVPDFISYNTLLNNL 183
+ + C PD ++Y V+ L + ++ + M +++ ++PD ++YNTL++ L
Sbjct: 323 LIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHML 382
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K D L + +E + G D + Y+A++ SF + G ++E+ L DM + P +
Sbjct: 383 SKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDV 442
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +++D ++G++D A + ++M
Sbjct: 443 VTYTAIVDGFCRLGRIDEAKKMLQQM 468
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 118/273 (43%), Gaps = 6/273 (2%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN I L K + A+R L+ ++ I P+ YN ++ + N I+ + +++
Sbjct: 268 ICNTTIYVLVKGCKLEKALRFLERMQVTGI-KPDIVTYNSLIKGYCDLNRIEDALELIAG 326
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIAS--PESIIVVNRIIFAFAKS 116
L Y Q+ +E++VQ ++ P+ + N +I +K
Sbjct: 327 LPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQV-TYNTLIHMLSKH 385
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
+ AL + D + Y+ ++ + GR+++ + M PD ++Y
Sbjct: 386 GHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTY 445
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+++ ++ R+D ++M + G KP+ ++YTAL++ +G E+ + N ++
Sbjct: 446 TAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEE 505
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P+ Y ++ ++ GK+ A + EM
Sbjct: 506 HWWTPNAITYGVVMHGFRREGKLSEACDLTREM 538
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 123/305 (40%), Gaps = 40/305 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I L K G+ A+ L+ DK + Y+ ++ + + +D + ++ D+
Sbjct: 376 NTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMY- 434
Query: 62 SSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
SR+ + D YT F + ++++ + + + ++ S +
Sbjct: 435 -SRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKS 493
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP-------- 171
+A + + + P+ ITY +V+ R G++++ + M E G P
Sbjct: 494 LEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLL 553
Query: 172 ---------------------------DFISYNTLLNNLRKIRRLDLCLIYFREMGESGI 204
+ +++ T+++ +I ++ L +M S
Sbjct: 554 IQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNK 613
Query: 205 KPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMT 264
PD +TYTAL D+ G+ G ++E+ L M + + P+ +RS+I + G+VD +
Sbjct: 614 HPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLN 673
Query: 265 IFEEM 269
+ + M
Sbjct: 674 LLDRM 678
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/298 (17%), Positives = 113/298 (37%), Gaps = 37/298 (12%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK + L++ + + +P+ YN ++ ++ D + LK+ +
Sbjct: 346 LCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI 405
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
Y+ +F + + ++ + ++ I+ F + +I++A +
Sbjct: 406 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKML 465
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ CKP+ ++Y +L+ L G+ + +E P+ I+Y +++ R+
Sbjct: 466 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRRE 525
Query: 187 RRLDLCLIYFREMGESGIKP-----------------------------------DLLTY 211
+L REM E G P +++ +
Sbjct: 526 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 585
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T +I F + G++E +L + DM P Y +L D L K G++D A + +M
Sbjct: 586 TTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKM 643
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/273 (17%), Positives = 119/273 (43%), Gaps = 5/273 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
++ C+ G + A ++LQ + K+ PN +Y +L + + +++
Sbjct: 449 VDGFCRLGRIDEAKKMLQQMY-KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHW 507
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
T ++ Y F ++ E+V+ + + +N +I + +++++ +A
Sbjct: 508 WTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAK 567
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ C +++ + V+ ++G + L+ M + PD ++Y L + L
Sbjct: 568 KYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDAL 627
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K RLD +M G+ P +T+ ++I + + G +++ L L + M ++ +P
Sbjct: 628 GKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFR 685
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+Y +I+ L G ++ A + ++ + S L
Sbjct: 686 TIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKL 718
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 128/265 (48%), Gaps = 1/265 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LCK G AA+ +L+ + K + L YN ++ + ++ +F +++
Sbjct: 181 INGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRI 240
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
+ Y + + + +++ ++ + ++ AF K ++++A
Sbjct: 241 CPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKN 300
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F + KP+++TYN +++ V VN + F +M + GV PD SY+ +++
Sbjct: 301 VFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFC 360
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
KI+ +D + F EM I PD++TY +LID ++G I +L+L +M + P+I
Sbjct: 361 KIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNII 420
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SL+D L K VD A+ + ++
Sbjct: 421 TYNSLLDALCKNHHVDKAIELLTKL 445
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 95/181 (52%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F E+V +++ N +I Q++ A+ + + P + T++I++D
Sbjct: 231 FYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFC 290
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G+V + N F M + V P+ ++YN+L+N + ++ F M + G+ PD+
Sbjct: 291 KEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVH 350
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+Y+ +I F + ++E+++LF +M +QI P + Y SLID L K G++ A+ + EM
Sbjct: 351 SYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEM 410
Query: 270 N 270
+
Sbjct: 411 H 411
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 94/168 (55%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+I+ N ++ + ++ KA IF+ + + PD+ +Y+I++ ++ V++ + F
Sbjct: 313 NIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLF 372
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + PD ++YN+L++ L K R+ L EM + G P+++TY +L+D+ +
Sbjct: 373 EEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKN 432
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++++++ L +K I+PS+ Y LI+ L K G++ A +FE++
Sbjct: 433 HHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDV 480
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-----ETNDIDLSFQILK 57
N I LC G + A+ LL + +NI P Y ++ A + + F ++
Sbjct: 248 NTLICGLCIMGQLKDAIGLLHKMILENIN-PTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
V ++ Y + + + ++ + + QI + + +I F K +
Sbjct: 307 KKDVKPNIVT---YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIK 363
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++A+ +F+ + + PD++TYN ++D L + GR++ L M + G P+ I+YN
Sbjct: 364 MVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYN 423
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+LL+ L K +D + ++ + I+P + TY LI+ ++G ++++ ++F D+
Sbjct: 424 SLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVN 483
Query: 238 QIRPSIYVYRSLIDNLKKMGKV 259
+Y Y ++I K G V
Sbjct: 484 GYNIDVYTYNTMIKGFCKKGFV 505
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 107/219 (48%)
Query: 51 LSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRII 110
LSF + ++L + T + + D + L F ++V+ + + + +I
Sbjct: 122 LSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLI 181
Query: 111 FAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
K Q + AL + I G + D++ YN ++D + + VND + ++ M +
Sbjct: 182 NGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRIC 241
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P ++YNTL+ L + +L + +M I P + T++ L+D+F + G ++E+ +
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNV 301
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
F M ++ ++P+I Y SL++ + +V+ A +IF M
Sbjct: 302 FVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTM 340
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 118 QIEKALLIFDHIKGLK-CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
Q+ + F+H+ K P +I + +L L + + +++ M+ G+ + ++
Sbjct: 48 QLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTL 107
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
+ L+N ++ L F + + G +PD +T T LI G+I ++L + +
Sbjct: 108 SILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLA 167
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ + YR+LI+ L K+G+ A+ + ++ L L
Sbjct: 168 LGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRL 207
>gi|356534139|ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Glycine max]
Length = 480
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 94/169 (55%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ N +++A + ++++ + D + PD T+NI+L +LG+ + LN
Sbjct: 261 ILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLN 320
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+E G+ P + + TL++ L + LD C +F EM ++G PD++ YT +I + G
Sbjct: 321 HMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNGCIPDVVAYTVMITGYVVAG 380
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
IE++L+++ M ++ P+++ Y S+I L GK D A ++ +EM +
Sbjct: 381 EIEKALKMYQYMISREQVPNVFTYNSIIQGLCMAGKFDEACSMLKEMKT 429
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 4/238 (1%)
Query: 34 NAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFI 91
++YN +L N L + + LL+ SSD Y A Q +
Sbjct: 227 HSYNAILHGLLVLNQYKLIEWVYQQLLLDG--FSSDILTYNIVMYAKYRLGKLDQFHRLL 284
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
+E+ + N ++ K + AL + +H++ + +P ++ + ++D L R
Sbjct: 285 DEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRA 344
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G ++ F M + G +PD ++Y ++ ++ L ++ M P++ TY
Sbjct: 345 GNLDACKYFFDEMIKNGCIPDVVAYTVMITGYVVAGEIEKALKMYQYMISREQVPNVFTY 404
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++I G +E+ + +MK + P+ +VY +L L+ GK A + +M
Sbjct: 405 NSIIQGLCMAGKFDEACSMLKEMKTKGCSPNSFVYNTLASCLRNAGKTADAHEVIRQM 462
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 37/174 (21%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM 199
T+NI++ G G ++ F K P SYN +L+ L + + L ++++
Sbjct: 193 TFNILIRTCGEAGLAKSLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQL 252
Query: 200 GESGIKPDLLTYT----------------ALIDSFGRTGNIEE----------------- 226
G D+LTY L+D GR G +
Sbjct: 253 LLDGFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKP 312
Query: 227 --SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM--NSSLSDL 276
+L L N M++ I P++ + +LID L + G +D F+EM N + D+
Sbjct: 313 LAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNGCIPDV 366
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N ++ LCK +V A + Q LR N++N ++ + + + ++++
Sbjct: 240 NVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQH 299
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
+ S YT+ A+ M D + ++E+ + P +++ ++ A K+ + +A
Sbjct: 300 GFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREA 359
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
L FD +K PD YN ++ ILGR GR+ D + M+ G+ P+ ++NTL++
Sbjct: 360 LDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISA 419
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ + L +M E PD+ TYT L+ + ++ L L M ++ I P
Sbjct: 420 ACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 479
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y L+ L + GKV + EEM S
Sbjct: 480 FSTYTLLVSWLCRNGKVAQSCLFLEEMVS 508
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
+N ++ K R +++A +F ++G PD ++N ++ + + + L+ M
Sbjct: 238 AMNVLLDTLCKERSVKRARGVFQELRG-TIPPDENSFNTLVHGWCKARMLKEALDTMEEM 296
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K+ G P ++Y +L+ + EM + P+++TYT L+ + G+ G
Sbjct: 297 KQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRT 356
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E+L F+ +K+ + P Y SLI L + G+++ A ++ EEM ++
Sbjct: 357 REALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTT 404
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 1/184 (0%)
Query: 87 LLIFIEEVVQIAS-PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVL 145
++I++ E +Q+ P ++ N ++ F + Q+ AL + L +P ++T+ +L
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 146 DILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
+ R RV D L F M G P+ + YNT+++ L K +++D L M + GI
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD++TY +LI +G ++ R+ + M +++I P ++ + +LID K G+V A
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 266 FEEM 269
+EEM
Sbjct: 279 YEEM 282
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 84 CTQL---LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
C+QL L F+ +++++ SI+ ++ F + ++ AL +FD + G+ KP+++
Sbjct: 129 CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVI 188
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN ++D L + +V++ L+ M++ G+ PD ++YN+L++ L R M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+ I PD+ T+ ALID+ + G + E+ + +M ++ + P I Y LI L ++D
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 261 LAMTIFEEMNS 271
A +F M S
Sbjct: 309 EAEEMFGFMVS 319
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 107/234 (45%)
Query: 37 NCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ 96
N +L + + L+ L ++ S + + F D L +++V
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 97 IASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND 156
+ ++++ N II KS+Q++ AL + + ++ PD++TYN ++ L GR +D
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
+ M + + PD ++N L++ K R+ ++ EM + PD++TY+ LI
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++E+ +F M + P + Y LI+ K KV+ M +F EM+
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 132/272 (48%), Gaps = 7/272 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK+ V A+ LL + +K+ P+ YN ++ + + +++
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS--C 246
Query: 61 VSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
++ R + D +T A A + ++ F EE+++ + I+ + +I+ +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+++A +F + C PD++TY+I+++ + +V + F M + GVV + ++Y
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+ + +L++ FR M G+ P+++TY L+ G IE++L + DM++
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ I Y +I + K G+V A I+ +N
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 132/274 (48%), Gaps = 13/274 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LC +G S A R++ + + I+ P+ +N ++ A + + + + ++++
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 61 VSSRTLSSD--CYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
R+L D Y+ M D+ ++ F+ V + P+ ++ + +I + K
Sbjct: 284 --RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM--VSKGCFPD-VVTYSILINGYCK 338
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
S+++E + +F + + +TY I++ R G++N F M GV P+ I+
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
YN LL+ L +++ L+ +M ++G+ D++TY +I + G + ++ ++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Q + P I+ Y +++ L K G A +F +M
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
+ N +I A K ++ +A ++ + PD++TY++++ L R+++ F
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M G PD ++Y+ L+N K ++++ + F EM + G+ + +TYT LI + R G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSD 275
+ + +F M + P+I Y L+ L GK++ A+ I +M + D
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 78 FIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPD 137
F+ DD L +VQ SI +R++ A +K ++ + + +++ ++ L +
Sbjct: 59 FMKLDDSLDLFF---HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L T NI+L+ R +++ L+ M + G P +++ +LLN + R+ L F
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
+M G KP+++ Y +ID ++ ++ +L L N M++ I P + Y SLI L G
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 258 K 258
+
Sbjct: 236 R 236
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ +L +F H+ + P + ++ +L + ++ + + ++ + M+ G+ + + N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
LLN + +L L L + +M + G +P ++T+ +L++ F R + ++L +F+ M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGP 279
+P++ +Y ++ID L K +VD A+ + M D GP
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME---KDGIGP 219
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 1/262 (0%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVAS-AETNDIDLSFQILKDLLVSSRTLS 67
LCK + A+++++ + I A LV+S ++ + Q++ + +
Sbjct: 107 LCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTN 166
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
+ Y + R M + TQ L ++ ++Q + + ++ A K R ++A + D
Sbjct: 167 TATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLD 226
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR 187
I KP+L++YN++L L + GR D + F + G P+ +SYN LL +L
Sbjct: 227 EIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEG 286
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
R + + EM P +TY LI S G E +L + +M + + +P+ Y
Sbjct: 287 RWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYN 346
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
+I L K KVDL + ++M
Sbjct: 347 PIIARLCKDRKVDLVVKCLDQM 368
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 127/310 (40%), Gaps = 43/310 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N + LC GN++ +++LL L K + +PNA Y+ +L A+ + D + ++L +++
Sbjct: 171 NSLVRGLCMHGNLTQSLQLLDRLIQKGL-VPNAYTYSFLLEAAYKERGADEASKLLDEII 229
Query: 61 VSSRTLSSDCYTNFARAFIM---TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ Y T+D QL F E + SP +++ N ++ +
Sbjct: 230 AKGGKPNLVSYNVLLTGLCKEGRTEDAMQL--FRELPSKGFSP-NVVSYNILLRSLCNEG 286
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+ E+A ++ + G + P +TYNI++ L GR L M A P SYN
Sbjct: 287 RWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYN 346
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL----------------------- 214
++ L K R++DL + +M P+ TY A+
Sbjct: 347 PIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQ 406
Query: 215 -----------IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAM 263
I S R GN + +L +M + P + Y SLI L G ++ A+
Sbjct: 407 HFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAI 466
Query: 264 TIFEEMNSSL 273
IF M ++
Sbjct: 467 EIFSVMEENI 476
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 9/265 (3%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G A++L + L K F PN +YN +L + + + +L ++ R+
Sbjct: 247 LCKEGRTEDAMQLFRELPSKG-FSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSP 305
Query: 67 SSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
S+ Y + + L +EE+++ + N II K R+++ +
Sbjct: 306 STVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCL 365
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM--KEAGVVPDFISYNTLLNNLR 184
D + C P+ TYN + L G V + + S+ K+ +F Y ++ +L
Sbjct: 366 DQMMYRHCNPNEGTYNAIA-TLCEEGMVQEAFSIIQSLGNKQHFSTQEF--YKIVITSLC 422
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ EM + G PD TY++LI G + E++ +F+ M ++ I+
Sbjct: 423 RKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTE 481
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEM 269
Y SLI K + DLA+ +FE M
Sbjct: 482 NYNSLILGCCKSRRTDLALDVFEIM 506
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 112/267 (41%), Gaps = 2/267 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
+ LC+ GNV A++L+ + + A YN ++ ++ S Q+L L+
Sbjct: 139 VSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGL 198
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
++ Y+ A + ++E++ +++ N ++ K + E A+
Sbjct: 199 VPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQ 258
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+F + P++++YNI+L L GR + A M P ++YN L+ +L
Sbjct: 259 LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLT 318
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
R + L EM + KP +Y +I + ++ ++ + M + P+
Sbjct: 319 LHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEG 378
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y + I L + G V A +I + + +
Sbjct: 379 TYNA-IATLCEEGMVQEAFSIIQSLGN 404
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 88/181 (48%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E +V+ + ++++ K+ ++ KA+ + + + G PD +Y ++ L R
Sbjct: 85 LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
G V + M+E G + +YN+L+ L L L + + G+ P+ T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
Y+ L+++ + +E+ +L +++ + +P++ Y L+ L K G+ + AM +F E+
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Query: 271 S 271
S
Sbjct: 265 S 265
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
++ + + + A+ + D ++ + TYN ++ L G + L + + G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+VP+ +Y+ LL K R D E+ G KP+L++Y L+ + G E+++
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+LF ++ + P++ Y L+ +L G+ + A + EM+
Sbjct: 258 QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 153 RVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYT 212
R+ND M E G PD LL +L K ++ + M SGI PD +YT
Sbjct: 77 RLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYT 136
Query: 213 ALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
L+ S R GN+ +++L + M++ + Y SL+ L G + ++ + + +
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA-YNCVLVASAETNDIDLSFQILKDLLVSSR 64
I LC+ G V A ++QSL +K F Y V+ + + +FQ+L ++
Sbjct: 383 IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGF 442
Query: 65 TLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
T S Y++ R M ++ ++ +EE +++ + N +I KSR+ +
Sbjct: 443 TPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTEN----YNSLILGCCKSRRTDL 498
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLD 146
AL +F+ + G + TY I+++
Sbjct: 499 ALDVFEIMVGKGYLANETTYTILVE 523
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ +CK G++ A +L + + PN YN +L + + ++L ++
Sbjct: 304 IDGICKEGHLKVAHEILNRMPSYGLK-PNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L + F +++ +E+++ +I +I F K I++A+
Sbjct: 363 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAV 422
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
++ + CKP+ I+Y IVL L R D + + M + G + I++NTL+N L
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K ++ + ++M +G PDL++Y+ +ID G+ G +E+L L N M + + P+
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 542
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+Y S+ L + G+++ + +F+ + +
Sbjct: 543 IIYSSIASALSREGRINKVIQMFDNIQDT 571
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 7/270 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVSS 63
+E C+ G +AVR+L+ L + L + NC LV +A + +D + +L+DL
Sbjct: 164 LEAACRGGGFRSAVRVLEDLHARGCAL-DVGNCNLVLNAICDQGSVDKALHLLRDLPSFG 222
Query: 64 RTLSSDCYTNFARAFIMTD--DCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
Y + M C Q L+ EE+V++A P +I+ N +I ++ E+
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELM--EEMVRMACPPNIVTFNTLISYLCRNGLFER 280
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
+ + C PD+ Y ++D + + G + M G+ P+ + YNTLL
Sbjct: 281 VHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLK 340
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L R + EM + D +T+ L+D F + G ++ + L M P
Sbjct: 341 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMP 400
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y ++I+ K G +D A+ + + M +
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTA 430
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C+ G V + LL+ + +P+ Y V+ + ID + +LK +
Sbjct: 371 NILVDFFCQNGLVDRVIELLEQMLVHGC-MPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++ YT + + + +++Q P + I N +I K +E
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+A+ + + C PDLI+Y+ V+D LG+ G+ ++ L M G+ P+ I Y+++
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ L + R++ + F + ++ I+ D + Y A+I S + G E ++ M
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ Y LI L G V A + E+ S
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCS 640
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 2/214 (0%)
Query: 60 LVSSRTLSSDCYTNFA--RAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
L ++ + + YT F RA L ++E+ + + + I+ A +
Sbjct: 112 LAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGG 171
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
A+ + + + C D+ N+VL+ + G V+ L+ + G PD +SYN
Sbjct: 172 GFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYN 231
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
+L L +R EM P+++T+ LI R G E + M +
Sbjct: 232 AVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEH 291
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P I +Y ++ID + K G + +A I M S
Sbjct: 292 GCTPDIRMYATIIDGICKEGHLKVAHEILNRMPS 325
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 98/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ + M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 KIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 138 LITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
L +NI++ + G + + F S+ + G+ P +S+NTL+N KI LD
Sbjct: 136 LYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKS 195
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M SG+ PD+ TY+ LI+ + ++++ LF++M + P+ + +LID K G
Sbjct: 196 VMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNG 255
Query: 258 KVDLAMTIFEEM--NSSLSDL 276
+VDLAM I+ +M S L DL
Sbjct: 256 RVDLAMEIYRQMLSQSLLPDL 276
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
++PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
+ CK G + RL QS+ D K P+ ++N ++ + D+D F+ LK ++
Sbjct: 143 MHXFCKEGEI----RLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFR-LKSVM 197
Query: 61 VSSRTLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
+S + D YT + M DD +L +E++ + + +I
Sbjct: 198 QAS-GVHPDVYTYSVLINGLCKESKM-DDANELF---DEMLBNGLVPNXVTFTTLIDGHC 252
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVG---RVNDMLNEFASMKEAGVVP 171
K+ +++ A+ I+ + PDLITYN ++ L + G + +D+++E SMK G+ P
Sbjct: 253 KNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMK--GLKP 309
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
D I+Y TL++ K L+ Y + M + I+ D + YTALI + G ++ ++
Sbjct: 310 DKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKML 369
Query: 232 NDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+M ++P I Y +I+ K G V + +EM
Sbjct: 370 REMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQ 408
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I A+ +S + A+ + K K + T V++ L ++ + +
Sbjct: 68 VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEES 127
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
E G +N L++ K + L F + + G++P ++++ L++ + + G++
Sbjct: 128 LECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+E RL + M+ + P +Y Y LI+ L K K+D A +F+EM
Sbjct: 188 DEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEM 232
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 98/240 (40%), Gaps = 38/240 (15%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK + A L + B N +PN + ++ + +DL+ +I + +L S
Sbjct: 213 INGLCKESKMDDANELFDEMLB-NGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQML--S 269
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++L D +I N +I+ K +++A
Sbjct: 270 QSLLPD---------------------------------LITYNTLIYGLCKKGDLKQAH 296
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ D + KPD ITY ++D + G + M + + D ++Y L++ L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGL 356
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R REM G+KP++ TYT +I+ + G++ +L +M++ P++
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNV 416
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 55/121 (45%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G + D + + KE F + ++ +L K++ L ++ E E G L +
Sbjct: 80 GFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFF 139
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+ F + G I + +F+ + + +RPS+ + +L++ K+G +D + M +
Sbjct: 140 NILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQA 199
Query: 272 S 272
S
Sbjct: 200 S 200
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLK-------------C 134
F EE++ P + N ++ K +I +A L+F I +GL+ C
Sbjct: 212 FYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYC 271
Query: 135 K--------------------PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K PD+ TY+++++ L + G+++D F M + G+VP+ +
Sbjct: 272 KSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++ TL+N R DL + +++M G+KPD++TY LI+ + G++ E+ +L +M
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Q+ ++P + Y LID K G ++ A+ I +EM
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 11/271 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY CK+GN+ RL + + + +F P+ Y+ ++ + +D + ++ ++
Sbjct: 268 NGY----CKSGNLDQGFRLKRFMMENRVF-PDVFTYSVLINGLCKEGQLDDANKLFLEMC 322
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +T +T + +++++ +I N +I K +
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382
Query: 121 KA--LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+A L+I +GLK PD TY +++D + G + L M + G+ D +++
Sbjct: 383 EAKKLVIEMTQRGLK--PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ + ++ REM E+GIKPD TYT +I F + G+++ +L +M+
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y L++ L K G++ A + + M
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 13/274 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +LCK ++ A L + + + P ++N ++ ++ ++D F+ LK +
Sbjct: 229 NVLMHRLCKEHKINEAQLLFGEIGKRGL-RPTVVSFNTLINGYCKSGNLDQGFR-LKRFM 286
Query: 61 VSSRTLSSDCYT-----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+ +R D +T N DD +L F+E + P + +I
Sbjct: 287 MENRVFP-DVFTYSVLINGLCKEGQLDDANKL--FLEMCDRGLVPNDVTFTT-LINGHCV 342
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ + + + I+ + KPD+ITYN +++ L +VG + + M + G+ PD +
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y L++ K L+ L +EM + GI+ D + +TALI F R G + E+ R +M
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I+P Y +I K G V + +EM
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 79/148 (53%)
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ I PD+ +N+++ L + ++N+ F + + G+ P +S+NTL+N
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K LD R M E+ + PD+ TY+ LI+ + G ++++ +LF +M + + P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + +LI+ G+ DL M I+++M
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQM 356
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 14/225 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G++ A +L+ + + + P+ Y ++ + D++ + +I K+++
Sbjct: 369 NTLINGLCKVGDLREAKKLVIEMTQRGL-KPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + +T F + + E+++ +I F K ++
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVK 487
Query: 121 KALLIFDHIKGLKCK---PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
F +K ++C P ++TYN++L+ L + G++ + +M GVVPD I+YN
Sbjct: 488 TG---FKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYN 544
Query: 178 TLL-NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
LL + + R D + + E G+ D +YT+LI +T
Sbjct: 545 ILLEGHCKHGNRED----FDKLQSEKGLVQDYGSYTSLIGDLRKT 585
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 111/291 (38%), Gaps = 43/291 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL--- 60
I LCK G + A +L + D+ + +PN + ++ T DL +I + +L
Sbjct: 302 INGLCKEGQLDDANKLFLEMCDRGL-VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360
Query: 61 ------------------------------VSSRTLSSD--CYTNFARAFIMTDDCTQLL 88
++ R L D YT D L
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+E+V+ + +I F + Q+ +A + KPD TY +V+
Sbjct: 421 EIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGF 480
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G V M+ G VP ++YN LLN L K ++ + M G+ PD
Sbjct: 481 CKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDD 540
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY-VYRSLIDNLKKMGK 258
+TY L++ + GN E+ F+ ++ ++ Y Y SLI +L+K K
Sbjct: 541 ITYNILLEGHCKHGNRED----FDKLQSEKGLVQDYGSYTSLIGDLRKTCK 587
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/122 (19%), Positives = 59/122 (48%)
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+ ++++++ G +D + F +++ + F S L + L K+ ++ E
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ + G PD+ + L+ + I E+ LF ++ ++ +RP++ + +LI+ K G
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 259 VD 260
+D
Sbjct: 276 LD 277
>gi|297814374|ref|XP_002875070.1| hypothetical protein ARALYDRAFT_322482 [Arabidopsis lyrata subsp.
lyrata]
gi|297320908|gb|EFH51329.1| hypothetical protein ARALYDRAFT_322482 [Arabidopsis lyrata subsp.
lyrata]
Length = 582
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 93/169 (55%), Gaps = 8/169 (4%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFD---HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
V+NR++ A ++KA L F+ IKG K D TY +LDI G GR+ M + F
Sbjct: 95 VINRVLKAHPP---MQKAWLFFNWASQIKGFKH--DHFTYTTMLDIFGEAGRIQSMYSVF 149
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MKE GV+ D ++Y +L++ + +D + + EM + G +P +++YTA +
Sbjct: 150 HLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDDGCEPTVVSYTAYMKILFAD 209
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
G +EE+ ++ DM + ++ P+ + Y L++ L GK + A+ IF +M
Sbjct: 210 GRVEEATEVYKDMLRSRVSPNCHTYTVLMEYLVGTGKCEEALDIFFKMQ 258
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
+ +I + S ++ A+ +++ ++ C+P +++Y + IL GRV + +
Sbjct: 162 VTYTSLIHWVSSSGDVDGAMRLWEEMRDDGCEPTVVSYTAYMKILFADGRVEEATEVYKD 221
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M + V P+ +Y L+ L + + L F +M E G++PD LI + G
Sbjct: 222 MLRSRVSPNCHTYTVLMEYLVGTGKCEEALDIFFKMQEIGVQPDKPACNILIVKACKFGE 281
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
R+ MK+ + ++ + LK G+ D + ++NS +S
Sbjct: 282 TSFMARILVYMKENGVVLRYPIFLEASETLKAAGESD---DLLRQVNSHIS 329
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
YTAL+D + G+ E+++++ +M++++I PS+ Y L+ L+K+ +
Sbjct: 493 AYTALMDVYISAGSPEKAMKILGEMREREIMPSLGTYNVLLSGLEKISE 541
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 99/182 (54%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
+E +V + ++ N +I + + R + A IF+ +K +PD ITYN +++ L +
Sbjct: 179 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 238
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+ V + M+++GV P ++NTL++ +L+ C +M + GIK D+++
Sbjct: 239 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 298
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+ +++ +F + G I E++ + +DM + + P+ VY S+ID + G + A + E+M
Sbjct: 299 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 358
Query: 271 SS 272
+S
Sbjct: 359 NS 360
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 7/253 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK V+ A L+ + +K+ P+ +N ++ A ++ F +L D+
Sbjct: 230 NALINGLCKLEMVTKAEDLVMEM-EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM- 287
Query: 61 VSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ + SD + + +AF + + +++++ + V N II A+ +S
Sbjct: 288 -QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 346
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
E+A L+ + +K ++TYN++L L R ++++ +++ G+ PD +SYNT
Sbjct: 347 TEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 406
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ D L +EM + GI+P L TY L+ + G + + L+ M +
Sbjct: 407 IISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKN 466
Query: 239 IRPSIYVYRSLID 251
+ PS +Y ++D
Sbjct: 467 VEPSSSIYGIMVD 479
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
PD +YN+V+ L R G+ +D L F M + GVVP++I+YNT+++ K L+
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
+M G KP+++TY L+ R G ++E+ L ++M + P + Y L D L +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 256 MGKVDLAMTIFEE 268
G+ +++F E
Sbjct: 134 TGESRTMLSLFAE 146
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDL 59
C+ + LCK G V+ A ++L+ L + +P YN ++ + D+ +F I + +
Sbjct: 159 CSILLNGLCKDGKVAKAEQVLEMLVHTGL-VPTTVIYNTLINGYCQVRDLRGAFCIFEQM 217
Query: 60 LVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
SR + D Y + T+ + E+ + S+ N +I A+ +
Sbjct: 218 --KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 275
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
Q+EK + ++ K D+I++ V+ + G++ + + M V P+ YN
Sbjct: 276 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 335
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++++ + + + +M SG+ ++TY L+ R+ I+E+ L ++ Q
Sbjct: 336 SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 395
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+RP + Y ++I G D A+ + +EMN
Sbjct: 396 GLRPDVVSYNTIISACCNKGDTDKALELLQEMN 428
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 119/268 (44%), Gaps = 5/268 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
NGY C+ ++ A + + ++ ++I + YN ++ + + + ++ ++
Sbjct: 199 NGY----CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
S S + + A+ + + ++ Q +I ++ AF K+ +I +
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A+ I D + P+ YN ++D G MK +GV ++YN LL
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 374
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
L + ++D + G++PD+++Y +I + G+ +++L L +M + IRP
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ Y +L+ L G+V ++++M
Sbjct: 435 TLRTYHTLVSALASAGRVHDMECLYQQM 462
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
A P N +I +S + AL +FD + + P+ ITYN ++D + G +
Sbjct: 11 APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAG 70
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M G P+ ++YN LL+ L + R+D + EM + PD TY+ L D
Sbjct: 71 FRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDG 130
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
RTG L LF + ++ + Y L++ L K GKV A + E
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 180
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I+ AG + +L ++ K I ++ V+ A + I + IL D++
Sbjct: 265 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 324
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
++ Y + A+I + D Q + +E++ SI+ N ++ +S QI++
Sbjct: 325 KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 384
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A + ++ +PD+++YN ++ G + L M + G+ P +Y+TL++
Sbjct: 385 AEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVS 444
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L R+ +++M ++P Y ++D++ R N + L +M ++ I
Sbjct: 445 ALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%)
Query: 88 LIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDI 147
L +E+V + + I N +I K +E + D + KP+++TYN++L
Sbjct: 36 LKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSG 95
Query: 148 LGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
L R GR+++ M + PD +Y+ L + L + L F E + G+
Sbjct: 96 LCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG 155
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
T + L++ + G + ++ ++ + + P+ +Y +LI+ ++ + A IFE
Sbjct: 156 AYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 215
Query: 268 EMNS 271
+M S
Sbjct: 216 QMKS 219
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 166 EAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIE 225
E PD SYN ++ L + + L F EM + G+ P+ +TY +ID + G++E
Sbjct: 9 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68
Query: 226 ESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
RL + M +P+I Y L+ L + G++D + +EM S
Sbjct: 69 AGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMAS 114
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 114/223 (51%), Gaps = 8/223 (3%)
Query: 52 SFQILKDLLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRI 109
S + K+L++ + + D + +A++ + L ++++ ++I N +
Sbjct: 170 SEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYL 229
Query: 110 IFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKE 166
+ K ++ +++ ++ P+L T+NI+ +L G G+VN L + M+E
Sbjct: 230 LNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEK---MEE 286
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEE 226
G PD ++YNTL+N+ + RLD ++ M G+ PDL++YTAL++ + G + E
Sbjct: 287 EGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVRE 346
Query: 227 SLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ +LF+ M + + P I Y +LI K GK+ + ++ +M
Sbjct: 347 AHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDM 389
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
TD C ++ EE+ + ++ N + K K + ++ PD++T
Sbjct: 239 TDRCWEV---YEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVT 295
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN +++ R GR++D + M GVVPD +SY L+N L K R+ F M
Sbjct: 296 YNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMV 355
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
G+ PD++TY LI + + G ++ES L +DM I P + L++ K GK
Sbjct: 356 HRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFL 415
Query: 261 LAMTIFEEM 269
A+ + E+
Sbjct: 416 SALNLVVEL 424
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+E++ + I+ N +I ++ + +++ A ++ + PDL++Y +++ L
Sbjct: 280 FLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLC 339
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ GRV + F M G+ PD ++YNTL++ K ++ +M +GI PD
Sbjct: 340 KEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSF 399
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T L++ +G+ G +L L ++++ + S +Y LI L + + A + E M
Sbjct: 400 TCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERM 459
Query: 270 N 270
+
Sbjct: 460 S 460
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 9/274 (3%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G+ + L+ + ++ F P+ YN ++ + +D +F + K ++ R +
Sbjct: 268 LCKDGDTGKVNKFLEKMEEEG-FDPDIVTYNTLINSYCRKGRLDDAFYLYK--IMYRRGV 324
Query: 67 SSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
D YT + +V I+ N +I + K +++++
Sbjct: 325 VPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRS 384
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + PD T ++++ G+ G+ LN ++ GV Y+ L+ L
Sbjct: 385 LLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALC 444
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ R M + G KP+L Y LI SF + I E+L L +M ++I+P++
Sbjct: 445 RENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLA 504
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS--LSDL 276
YR++I L ++ + ++ EM +S L DL
Sbjct: 505 TYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDL 538
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 110/275 (40%), Gaps = 7/275 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDL--SFQILKDLL 60
N I CK G + + LL + I P+++ C ++ + + ++ +L
Sbjct: 367 NTLIHGYCKEGKMQESRSLLHDMIWNGIS-PDSFTCWVLVEGYGKEGKFLSALNLVVELQ 425
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++S D Y+ A + +E + + + + N +I +F + I
Sbjct: 426 RFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIA 485
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ALL+ + + KP+L TY V+ L R+ R + + M +G++PD L
Sbjct: 486 EALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALF 545
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +D + D ++ ALI G+I SL + + M + +
Sbjct: 546 YGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLL 605
Query: 241 PSIYVYRSLIDNLKKMGKVDLA---MTIFEEMNSS 272
P+ ++ +VD+ M IF+ MN+S
Sbjct: 606 PNPLTCNPFAILTSRL-RVDVKAANMAIFDGMNAS 639
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 7/274 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N ++ LCK G V A + L K+ LPNA +N + + N +D + L+++
Sbjct: 147 NLLLDTLCKEGKVEQARAIFLEL--KSHILPNAHTFNIFIHGWCKANLVDEAHWTLQEMK 204
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ Y+ + + +++ ++E+ P +++ II AKS+ E
Sbjct: 205 GHAFRPCVISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTE 264
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA-SMKEAGVVPDFISYNTL 179
+AL + +K CKPD +N ++ ILGR GR + ++ F M AGV D +YN++
Sbjct: 265 EALQLTQRMKSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFEKEMPNAGVSRDTSTYNSM 324
Query: 180 LNNLRKIRRLDLCLIYFREMGESG-IKPDLLTYTALIDSFGRTGNIEESLRLFNDM-KQQ 237
+ L + L REM S K D T+ L+ S RTG++ +L +DM K+
Sbjct: 325 IAMLCHHGHVSKALSLLREMETSAPFKLDGQTFYPLLKSCLRTGDMNLLSQLLDDMVKKH 384
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Q+ Y LI L + K A +FEEM S
Sbjct: 385 QLSLDRSAYALLIHGLCRANKCQWAYHLFEEMIS 418
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR---VGRVNDMLNEFAS 163
N I + K+ +++A +KG +P +I+Y+ ++ R +V ++L+E
Sbjct: 181 NIFIHGWCKANLVDEAHWTLQEMKGHAFRPCVISYSTIILFYCRQHNFSKVYELLDE--- 237
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ G P+ ++Y T++ L K + + L + M +G KPD + +LI GR G
Sbjct: 238 MEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQRMKSAGCKPDTPFFNSLIYILGRAGR 297
Query: 224 IEESLRLFN-DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E++ +F +M + Y S+I L G V A+++ EM +S
Sbjct: 298 FQEAVDVFEKEMPNAGVSRDTSTYNSMIAMLCHHGHVSKALSLLREMETS 347
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + + F+ + + E A+ +FD + + + + N++LD L + G+V F +
Sbjct: 110 TVGKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAESMNLLLDTLCKEGKVEQARAIFLEL 169
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
K + ++P+ ++N ++ K +D +EM +P +++Y+ +I + R N
Sbjct: 170 K-SHILPNAHTFNIFIHGWCKANLVDEAHWTLQEMKGHAFRPCVISYSTIILFYCRQHNF 228
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+ L ++M+ Q P++ Y ++I L K + A+ + + M S+
Sbjct: 229 SKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQRMKSA 276
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIR--- 187
G K +P+ Y++++DILG++ +++ M M +V + NT+ +R+
Sbjct: 69 GYKHRPE--AYDMMVDILGKMKQMDQMRELLEEMNRNHLV----TLNTVGKAMRRFSGAG 122
Query: 188 RLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYR 247
+ + + F E+G G++ + + L+D+ + G +E++ +F ++K I P+ + +
Sbjct: 123 KWEDAVRMFDELGTFGLEKNAESMNLLLDTLCKEGKVEQARAIFLELK-SHILPNAHTFN 181
Query: 248 SLIDNLKKMGKVDLAMTIFEEM 269
I K VD A +EM
Sbjct: 182 IFIHGWCKANLVDEAHWTLQEM 203
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 155 NDMLNEFASMKEAGVVPDFI----SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+D + + AG+ P + +Y+ +++ L K++++D RE+ E + L+T
Sbjct: 52 DDWKSALGVFRWAGLRPGYKHRPEAYDMMVDILGKMKQMD----QMRELLEEMNRNHLVT 107
Query: 211 YTAL---IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+ + F G E+++R+F+++ + + L+D L K GKV+ A IF
Sbjct: 108 LNTVGKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAESMNLLLDTLCKEGKVEQARAIFL 167
Query: 268 EMNSSL 273
E+ S +
Sbjct: 168 ELKSHI 173
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 53 FQILKD-------LLVSSRTLSSDCYTNFARAFIMTDD------CTQLLIFIEEVVQIAS 99
FQ+L D L + +R +SS C N ++ D L +E+++
Sbjct: 186 FQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGI 245
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
+ + ++ + +IE A + +K C PD +TY + L L + GRV++ +
Sbjct: 246 VPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFH 305
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
F +++ G I Y+ L++ L + R D L Y+ EM I PD+ YT LI F
Sbjct: 306 RFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFA 365
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G +++ L ++MK + P + Y +L+ L +G +D A ++ EM
Sbjct: 366 EAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEM 415
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 16/276 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
I + +AG A LL ++DK F+P+ YN +L A + +ID + ++ ++L ++
Sbjct: 361 IRRFAEAGRTKDAFLLLDEMKDKG-FVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNN 419
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
L S + + + +E+ + +++ N +I ++ +E+A
Sbjct: 420 VVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEAR 479
Query: 124 LIFDHIK-------------GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVV 170
++F ++ G D + ++D + + G+V + E+GVV
Sbjct: 480 MLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVV 539
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
PD ++YNTL+N L K + LD L F+E+ GI PD +TY LID R ++ L
Sbjct: 540 PDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATML 599
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
F ++ + PS+ +Y +++ +L +M K+ A+ ++
Sbjct: 600 FQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW 635
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC G + A RLL S+++ N P+ Y L + +D +F + L
Sbjct: 256 LSSLCNEGRIEDAGRLLCSMKE-NGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGG 314
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
TL Y+ + L + E++ + I + +I FA++ + + A
Sbjct: 315 FTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAF 374
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
L+ D +K PD YN +L L VG ++ + + M + VV D ++N ++ L
Sbjct: 375 LLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGL 434
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K +D + F EMGE G P ++TY ALID R G +EE+ LF+ M+ PS+
Sbjct: 435 CKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGN-NPSL 493
Query: 244 YV--------------YRSLIDNLKKMGKV 259
++ R L+D + + G+V
Sbjct: 494 FLRLTLGANQVRDTESLRKLVDGMCQSGQV 523
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ LCK G A+++ + ++ I +P+ Y +L + I+ + ++L + +
Sbjct: 221 MDGLCKRGMAVDALKMFDEMLERGI-VPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENG 279
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
YT F + E + +I + +I ++ + ++ L
Sbjct: 280 CPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGL 339
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + G PD+ Y I++ GR D MK+ G VPD YNTLL L
Sbjct: 340 SYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKAL 399
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +D EM ++ + D T+ +I + G I++++++F++M + P++
Sbjct: 400 FDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTV 459
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LID L + G ++ A +F +M
Sbjct: 460 MTYNALIDGLYRAGMLEEARMLFHKM 485
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P ++ A + + + ++A+ F + C+P YN V +L G + L
Sbjct: 141 PAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALA 200
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M +G +P+ +Y L++ L K L F EM E GI PD+ YT L+ S
Sbjct: 201 LYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLC 260
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
G IE++ RL MK+ P Y + L K G+VD A FE
Sbjct: 261 NEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFE 308
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%)
Query: 157 MLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
M + A + AG+ ++ L+ R + F MG+ +P Y A+
Sbjct: 128 MFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQ 187
Query: 217 SFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
G I +L L+N M P+ Y L+D L K G A+ +F+EM
Sbjct: 188 VLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEM 240
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Query: 84 CTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI---KGLKCKPDLIT 140
C + I ++ + ++ ++ N ++ F ++ E+AL + + +G C P++++
Sbjct: 146 CEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVS 205
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
Y IV++ G+V+ N F M + G+ P+ ++Y T+++ L K + +D F++M
Sbjct: 206 YAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+ G+KPD TY LI + G +E +R+ +M ++P Y Y SL++ L G+
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325
Query: 261 LAMTIFEEM 269
A +F+ M
Sbjct: 326 EARFLFDSM 334
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 134/296 (45%), Gaps = 42/296 (14%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LCKA V A + Q + DK + N YNC++ ++L+++ S+
Sbjct: 245 IDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM--SAH 302
Query: 65 TLSSDCYTNFARAFIMTDD--CTQLLIFIEEVVQIA------------------------ 98
L DCYT + + ++ C + + +++
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEM 362
Query: 99 ------------SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
SP+ I N I A+AK I++A+ IF+ +K PD++ Y ++D
Sbjct: 363 HDLLNLMVENGLSPDHHIF-NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALID 421
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L ++GRV+D + +F M GV P+ +N+L+ L + + + ++ EM GI+P
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP 481
Query: 207 DLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLA 262
D++ + ++ + G + ++ RL + M++ RP + Y +LI +G++D A
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEA 537
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
+ E + Q P+ ++ N I+ Q+ KA + D ++ + +P +I+Y ++
Sbjct: 471 YFEMLNQGIRPD-VVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHC 529
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
VGR+++ M G+ PD +YNTLL+ + R+D FREM +GI P ++
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY+ ++ T E+ L+ +M + +I++Y +++ L K VD A +F+ +
Sbjct: 590 TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL 649
Query: 270 NS 271
S
Sbjct: 650 CS 651
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
++ +LL + + + P +++ +I F Q++KA +F + +P+++T
Sbjct: 181 AEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVT 240
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
Y V+D L + V+ F M + GV PD +YN L++ I + + EM
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKV 259
G+KPD TY +L++ G E+ LF+ M ++ I+P++ +Y LI G +
Sbjct: 301 AHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 21/277 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDK----NIFLPNA--YNCVLVASAETNDIDLSFQILK-- 57
I+ LCK G V AV + ++ NIF+ N+ Y V E + F++L
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK-EFYFEMLNQG 478
Query: 58 ---DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFA 114
D++ + L + C + +M Q LI + E ++ + +I +I
Sbjct: 479 IRPDVVFFNTILCNLC----TKGQVMK---AQRLIDLME--RVGTRPGVISYTTLIGGHC 529
Query: 115 KSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
+I++A D + + KPD TYN +L R GR++D F M G+ P +
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y+T+L+ L RR + M SG + ++ Y +++ + ++E+ +LF +
Sbjct: 590 TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL 649
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + I + +I L K G+ + AM +F ++S
Sbjct: 650 CSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 49/221 (22%)
Query: 98 ASPESIIVVNRIIFAFAK-----SRQIEKALLI--FDHI---KGLKCKPDLITYNIVLDI 147
A P S+I N ++ A ++ S E L++ F+ + +K PD TY+I++
Sbjct: 44 ARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGC 103
Query: 148 LGRVGRVNDMLNEFA------------------------------------SMKEAGVVP 171
R+GR+ F M E G P
Sbjct: 104 FCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTP 163
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGES---GIKPDLLTYTALIDSFGRTGNIEESL 228
D +SYNTLL +R + L M +S P++++Y +I+ F G ++++
Sbjct: 164 DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAY 223
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LF +M + I+P++ Y ++ID L K VD A +F++M
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQM 264
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 104 IVVNRIIFAFAKSRQIEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLN 159
IV+N+++ ++++ +A+ ++ + L C PD+++YN +L R + +L+
Sbjct: 130 IVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLH 189
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
A + P+ +SY ++N ++D F EM + GI+P+++TYT +ID
Sbjct: 190 MMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC 249
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ ++ + +F M + ++P Y LI +GK + + EEM++
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 4/239 (1%)
Query: 36 YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDC--YTNFARAFIMTDDCTQLLIFIEE 93
+N + A A+ ID + I + + LS D Y A ++ +
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKM--KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQ 438
Query: 94 VVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGR 153
++ +I V N +++ + EKA + + +PD++ +N +L L G+
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498
Query: 154 VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTA 213
V M+ G P ISY TL+ + R+D M G+KPD TY
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 214 LIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
L+ + R G I+++ +F +M + I P + Y +++ L + A ++ M +S
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 11/278 (3%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKD 58
+CN LC G V A RL+ L ++ P +Y ++ ID + + L
Sbjct: 490 LCN-----LCTKGQVMKAQRLID-LMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDV 543
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+L Y + E+++ ++ + I+ +R+
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+A ++ ++ + ++ YNI+L+ L + V++ F S+ + ++N
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ L K R + + F + G+ PD+ TY + ++ G +EE LF+ M++
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLA---MTIFEEMNSSL 273
P+ + +L+ L G + A + +E N SL
Sbjct: 724 TTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSL 761
>gi|255541714|ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549101|gb|EEF50590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 248
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 79/144 (54%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCL 193
C PD + Y ++ L + R++D + +KEAG PD + YN L+ RLD
Sbjct: 6 CTPDAMVYYKLISGLSQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKAR 65
Query: 194 IYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
+M E+G++PD +TY LI FG+ G+I+ + R+ M + ++P++ Y SLI
Sbjct: 66 EMLNDMEEAGLEPDTITYNTLISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYGSLIHAY 125
Query: 254 KKMGKVDLAMTIFEEMNSSLSDLA 277
G VD AM IF+ M+++ S +A
Sbjct: 126 CLNGNVDEAMKIFKAMDAAASRVA 149
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 107/176 (60%), Gaps = 9/176 (5%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVN 155
+P++++ ++I +++R+++ A + +K PD++ YNI++ R+ +
Sbjct: 7 TPDAMVYY-KLISGLSQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKAR 65
Query: 156 DMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALI 215
+MLN+ M+EAG+ PD I+YNTL++ KI + + ++M + G++P ++TY +LI
Sbjct: 66 EMLND---MEEAGLEPDTITYNTLISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYGSLI 122
Query: 216 DSFGRTGNIEESLRLFN--DMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ GN++E++++F D ++ P+ +Y LID+L + ++LA+++ ++M
Sbjct: 123 HAYCLNGNVDEAMKIFKAMDAAASRVAPNNVIYNILIDSLCENNDIELALSLMDDM 178
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I+ N +I F +++KA + + ++ +PD ITYN ++ G++G +
Sbjct: 45 IVCYNILIGGFCNKNRLDKAREMLNDMEEAGLEPDTITYNTLISYFGKIGDIKVAHRMMK 104
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREM--GESGIKPDLLTYTALIDSFGR 220
M + G+ P ++Y +L++ +D + F+ M S + P+ + Y LIDS
Sbjct: 105 QMIKDGLQPTVVTYGSLIHAYCLNGNVDEAMKIFKAMDAAASRVAPNNVIYNILIDSLCE 164
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+IE +L L +DM+ + ++P+ Y ++ L++ ++ A+ + + M
Sbjct: 165 NNDIELALSLMDDMRVKGVKPNTGTYNAMFKGLRERKWLNQALELMDRM 213
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 168 GVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEES 227
G PD + Y L++ L + RR+D ++ E+G PD++ Y LI F ++++
Sbjct: 5 GCTPDAMVYYKLISGLSQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKA 64
Query: 228 LRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ NDM++ + P Y +LI K+G + +A + ++M
Sbjct: 65 REMLNDMEEAGLEPDTITYNTLISYFGKIGDIKVAHRMMKQM 106
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 98/229 (42%), Gaps = 5/229 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L +A + A +L L++ F P+ YN ++ N +D + ++L D+ +
Sbjct: 17 ISGLSQARRMDDAASVLTKLKEAG-FCPDIVCYNILIGGFCNKNRLDKAREMLNDMEEAG 75
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y F D ++++++ +++ +I A+ + +++A+
Sbjct: 76 LEPDTITYNTLISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYGSLIHAYCLNGNVDEAM 135
Query: 124 LIFDHIKGLKCK--PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
IF + + P+ + YNI++D L + L+ M+ GV P+ +YN +
Sbjct: 136 KIFKAMDAAASRVAPNNVIYNILIDSLCENNDIELALSLMDDMRVKGVKPNTGTYNAMFK 195
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
LR+ + L+ L M E PD +T L + G E+ +L
Sbjct: 196 GLRERKWLNQALELMDRMMEQPCNPDYITMEILTEWLSAVGETEKLKKL 244
>gi|224135537|ref|XP_002322098.1| predicted protein [Populus trichocarpa]
gi|222869094|gb|EEF06225.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 127/269 (47%), Gaps = 2/269 (0%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLV 61
N I LCK G A +LL+ L Y ++ A + D+D + ++LK +L
Sbjct: 341 NSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLN 400
Query: 62 SSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + RA + ++ T+LL + ++Q +I +N +I F K ++E+
Sbjct: 401 KGGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEE 460
Query: 122 ALLIF-DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
AL + D + G PD +T+ ++ L VGR + N M E G+ P ++YN +L
Sbjct: 461 ALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAIL 520
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
L K++ + F EM G+ + TY+ +++ +G I+ + + ++++
Sbjct: 521 RGLFKLQLTKEAMAVFDEMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVIWPSKI 580
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+VY +++ L + G ++ A+ E+
Sbjct: 581 HDDFVYAAILKGLCRSGHLNEAIHFLYEL 609
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P LI YN ++D V N M G P +SY TL+N KI +
Sbjct: 155 PSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKL 214
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLR----LFNDMKQQQIRP-SIYVYRSLI 250
F EM E G+ P+ L+Y+ LI R +IE LF M+ ++ + + + +L+
Sbjct: 215 FDEMPEWGVVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQRMRHEEDQSVNSAAFDNLV 274
Query: 251 DNLKKMGKVDLAMTIFEEM 269
D L + G + I EEM
Sbjct: 275 DCLCREGLFNEVFMIAEEM 293
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 42/208 (20%)
Query: 102 SIIVVNRIIFAFAKSRQIEKAL-LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNE 160
S+I NR+I F A +++D I C P +++Y +++ ++G ++D
Sbjct: 156 SLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHC-PSIVSYTTLVNGYSKIGEISDAYKL 214
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLD------------------------------ 190
F M E GVVP+ +SY+ L+ + + R ++
Sbjct: 215 FDEMPEWGVVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQRMRHEEDQSVNSAAFDNLV 274
Query: 191 --LC--------LIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
LC + EM + + Y LIDS + G + R+ M+++
Sbjct: 275 DCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGFT 334
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
PS+ Y S+I L K G A + EE
Sbjct: 335 PSVVSYNSIIHGLCKEGGCMRAYQLLEE 362
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/250 (17%), Positives = 111/250 (44%), Gaps = 4/250 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N Y+ LC N + + +L S+ N P+ N V+ + ++ + ++L D++
Sbjct: 411 NIYLRALCLMNNPTELLNVLVSMLQTNC-QPDVITLNTVINGFCKMGRVEEALKVLNDMM 469
Query: 61 VSSRTLS-SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + +T+ + + + ++++ ++ N I+ K +
Sbjct: 470 TGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLT 529
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
++A+ +FD + + TY+I+++ L G+++ + + + D Y +
Sbjct: 530 KEAMAVFDEMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAI 589
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
L L + L+ + + E+ +SG+ P++++Y +ID G E+ ++ +M++ +
Sbjct: 590 LKGLCRSGHLNEAIHFLYELVDSGVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNGL 649
Query: 240 RPSIYVYRSL 249
P +R+L
Sbjct: 650 TPDAVTWRTL 659
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 134 CKPDLITYNIVLDILGRVGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDL 191
C PD T N+++ L LN + E VP I+YN L++ + ++
Sbjct: 116 CVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNV 175
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M G P +++YT L++ + + G I ++ +LF++M + + P+ Y LI
Sbjct: 176 AHRMLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLI 234
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 101 ESIIVVNRIIFA------FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+SI + NR + K R +++AL + DH++ PD + + ++ L R
Sbjct: 42 QSICITNRSYWTQKIHDLCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRF 101
Query: 155 NDMLNEFASMKEAGVVPDFISYNT----LLNNLRKIRRLDLC--LIYFREMGESGIKPDL 208
N+ + VPD + N LL++ R L++ LI F+ P L
Sbjct: 102 NEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFK----PEFVPSL 157
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
+ Y LID F + R+ DM + PSI Y +L++ K+G++ A +F+E
Sbjct: 158 INYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDE 217
Query: 269 M 269
M
Sbjct: 218 M 218
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 122/252 (48%), Gaps = 8/252 (3%)
Query: 22 LQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCYTNFARAFI 79
+Q R K P+A YN ++ A + + I++D+L ++ + Y N A
Sbjct: 37 MQEWRCK----PDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACG 92
Query: 80 MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLI 139
+ + L +++ + ++ N ++ A Q KA+ F+ +KG D
Sbjct: 93 AAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTF 152
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKE--AGVVPDFISYNTLLNNLRKIRRLDLCLIYFR 197
T NI++ L ++G+ + + F SM+E PD ++Y +++++ +++ C F
Sbjct: 153 TLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFD 212
Query: 198 EMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMG 257
M G+KP+++ Y +L+ ++ G E+L +FN +K+ +RP I Y SL++ +
Sbjct: 213 LMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSA 272
Query: 258 KVDLAMTIFEEM 269
+ + A +F +M
Sbjct: 273 QPEKAREVFNKM 284
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 11/271 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN---AYNCVLVASAETNDIDLSFQILKDLLVS 62
I L K G A+ L S+R++ P Y ++ + ++ I DL+V+
Sbjct: 158 IHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIF-DLMVA 216
Query: 63 SRTLSS-DCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEK 121
+ Y + A+ + L + + I+ ++ A+ +S Q EK
Sbjct: 217 EGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEK 276
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL- 180
A +F+ +K CKP+ ++YN ++D G G + + + M++ G+ PD +S +TLL
Sbjct: 277 AREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLA 336
Query: 181 --NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
R+I R++ L R GI + + Y + I S+ G+ E++L L+ M++
Sbjct: 337 ACGRCRQITRIETILEAAR---SRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN 393
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++P Y LI K+GK ++ FE+M
Sbjct: 394 VKPDAVTYNILISGSSKLGKYTESLRFFEDM 424
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 11/281 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLS-----FQILK 57
N I AGN A+ L + + + + P+ +V SA N S F+I+K
Sbjct: 85 NNVINACGAAGNWKKALELCKKMTENGVG-PDLVTHNIVLSALKNGAQYSKAISYFEIMK 143
Query: 58 DLLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ--IASPESIIVVNRIIFAFAK 115
V+S T + + + C + + + + P ++ I+ ++
Sbjct: 144 GANVTSDTFTLNI---IIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCI 200
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
Q+E IFD + KP+++ YN +L G + L F +K+ G+ PD +S
Sbjct: 201 YGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVS 260
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y +LLN + + + F +M ++ KP+ ++Y ALID++G G ++E++ L ++M+
Sbjct: 261 YTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEME 320
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDL 276
+ I+P + +L+ + ++ TI E S DL
Sbjct: 321 KDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDL 361
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 91 IEEVVQIASPESI----IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
IE +++ A I + N I ++ EKAL ++ ++ KPD +TYNI++
Sbjct: 347 IETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILIS 406
Query: 147 ILGRVGRVNDML-----------------------NEFASMKEAGVVPDFISYNTLLNNL 183
++G+ + L + F+SMK++G PD ++Y TL+
Sbjct: 407 GSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAY 466
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
F+EM +GI PD + ++L+++F + G E L+L MK++ I +
Sbjct: 467 NAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQ 526
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLA 277
Y +I + + A + E ++SSLS ++
Sbjct: 527 KSYFEIIASCTMIRDWKTASEMIEYLDSSLSSIS 560
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I +A+ Q+++A +F ++ +CKPD YN ++ R G+ +N M A
Sbjct: 17 MIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAA 76
Query: 169 VVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ P +YN ++N N +K L+LC ++M E+G+ PDL+T+ ++ +
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKA--LELC----KKMTENGVGPDLVTHNIVLSALKNGA 130
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++ F MK + + +I L K+G+ A+ +F M
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSM 177
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 61/132 (46%)
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
Y +++ + R +V+ F M+E PD YN+L++ + + + +M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
+ I P TY +I++ G GN +++L L M + + P + + ++ LK +
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 261 LAMTIFEEMNSS 272
A++ FE M +
Sbjct: 134 KAISYFEIMKGA 145
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 122/301 (40%), Gaps = 33/301 (10%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ G+ A+ L S+R+ N+ P+A YN ++ S++ S + +D++
Sbjct: 367 NSGIKSYLSFGDYEKALELYTSMRESNV-KPDAVTYNILISGSSKLGKYTESLRFFEDMV 425
Query: 61 VS-----------------SRTLSSDC------YTNFARAFIMTDDCTQLLIFIEEVVQI 97
S S S C YT +A+ + +E+
Sbjct: 426 DSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVN 485
Query: 98 ASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
P I+ + ++ AF K + E+ L + + +K + +Y +I+ + D
Sbjct: 486 GIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSY---FEIIASCTMIRDW 542
Query: 158 LNEFASMKEAGVVPDFISYNTL---LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
++ IS TL LN L K + + + F +M S L TY +
Sbjct: 543 KTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVV 602
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
+ + G + + + M+ + P++Y++++++ + + +D A T+ E++ SSL
Sbjct: 603 LRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVLPYIWRENGMDFAATMQEKI-SSLR 661
Query: 275 D 275
D
Sbjct: 662 D 662
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 113/220 (51%), Gaps = 8/220 (3%)
Query: 55 ILKDLLVSSRTLSSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFA 112
+ K+L++ + + D + +A++ + L ++++ ++I N ++
Sbjct: 218 VFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNG 277
Query: 113 FAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL---GRVGRVNDMLNEFASMKEAGV 169
K ++ +++ ++ P+L T+NI+ +L G G+VN L + M+E G
Sbjct: 278 LLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEK---MEEEGF 334
Query: 170 VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLR 229
PD ++YNTL+N+ + RLD ++ M G+ PDL++YTAL++ + G + E+ +
Sbjct: 335 DPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQ 394
Query: 230 LFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
LF+ M + + P I Y +LI K GK+ + ++ +M
Sbjct: 395 LFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDM 434
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Query: 81 TDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLIT 140
TD C ++ EE+ + ++ N + K K + ++ PD++T
Sbjct: 284 TDRCWEV---YEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVT 340
Query: 141 YNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMG 200
YN +++ R GR++D + M GVVPD +SY L+N L K R+ F M
Sbjct: 341 YNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMV 400
Query: 201 ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVD 260
G+ PD++TY LI + + G ++ES L +DM I P + L++ K GK
Sbjct: 401 HRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFL 460
Query: 261 LAMTIFEEM 269
A+ + E+
Sbjct: 461 SALNLVVEL 469
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F+E++ + I+ N +I ++ + +++ A ++ + PDL++Y +++ L
Sbjct: 325 FLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLC 384
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ GRV + F M G+ PD ++YNTL++ K ++ +M +GI PD
Sbjct: 385 KEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSF 444
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T L++ +G+ G +L L ++++ + S +Y LI L + + A + E M
Sbjct: 445 TCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERM 504
Query: 270 N 270
+
Sbjct: 505 S 505
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 9/274 (3%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTL 66
LCK G+ + L+ + ++ F P+ YN ++ + +D +F + K ++ R +
Sbjct: 313 LCKDGDTGKVNKFLEKMEEEG-FDPDIVTYNTLINSYCRKGRLDDAFYLYK--IMYRRGV 369
Query: 67 SSD--CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALL 124
D YT + +V I+ N +I + K +++++
Sbjct: 370 VPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRS 429
Query: 125 IFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLR 184
+ + PD T ++++ G+ G+ LN ++ GV Y+ L+ L
Sbjct: 430 LLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALC 489
Query: 185 KIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIY 244
+ R M + G K +L Y LI SF + I E+L L +M ++I+P++
Sbjct: 490 RENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLA 549
Query: 245 VYRSLIDNLKKMGKVDLAMTIFEEMNSS--LSDL 276
YR++J L ++ + ++ EM +S L DL
Sbjct: 550 TYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDL 583
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 105/262 (40%), Gaps = 3/262 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDL--SFQILKDLL 60
N I CK G + + LL + I P+++ C ++ + + ++ +L
Sbjct: 412 NTLIHGYCKEGKMQESRSLLHDMIWNGIS-PDSFTCWVLVEGYGKEGKFLSALNLVVELQ 470
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
++S D Y+ A + +E + Q + + N +I +F + I
Sbjct: 471 RFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIA 530
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
+ALL+ + + KP+L TY VJ L R+ R + + M +G +PD L
Sbjct: 531 EALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALF 590
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ +D + D ++ ALI G+I SL + + M + +
Sbjct: 591 YGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLL 650
Query: 241 PSIYVYRSLIDNLKKMGKVDLA 262
P+ + +ID L K +VD A
Sbjct: 651 PNPLTCKYVIDGLWKARRVDSA 672
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLS--FQILKDLLVSS 63
++ C+ A ++L + D N +P A C V +A + +S ++ + + +
Sbjct: 272 VDLWCREQKAEEAEKMLNEMFD-NGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ Y + F + + ++++ + ++ N +I IE A
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++G D TYN+++D L + G+V++ + F ++ G+ P+ +++NT++N L
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + D+ + +M +G PD TY+ I++ +T E L ++M Q+ ++PS
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPST 510
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +ID L K LA I+ +M S
Sbjct: 511 VNYTIVIDRLFKERNYGLATRIWGQMVS 538
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 7/276 (2%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ C G V A+ LL +R+ + P+ YN ++ I+ +F++L+ L
Sbjct: 339 NAMVQGFCNVGKVYKAMALLDQMRECGV-EPDVVTYNLLIRGQCIDGHIESAFRLLR--L 395
Query: 61 VSSRTLSSDCYTN--FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ L++D YT A T + + + + + N +I K +
Sbjct: 396 MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGK 455
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A + + C PD TY+ ++ L + + L+ M + V P ++Y
Sbjct: 456 FDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTI 515
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
+++ L K R L + +M G PD++TYT + ++ G + E+ + +MK+
Sbjct: 516 VIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSSLS 274
I Y +LID +GK D A+TI + M S
Sbjct: 576 IIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVAS 611
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 124/302 (41%), Gaps = 42/302 (13%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLL 60
N I LC+ ++ A R L SL ++ + P+A+ N +++ T +D++ + +
Sbjct: 133 NALIRALCRRADLRHAQRYL-SLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + + Y F T + L E+ Q + ++ +R+ E
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGE 247
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVND---MLNE----------------- 160
+ L + +K L +P Y ++D+ R + + MLNE
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVV 307
Query: 161 ---------------FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIK 205
F SMK G P+ +YN ++ + ++ + +M E G++
Sbjct: 308 NAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVE 367
Query: 206 PDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTI 265
PD++TY LI G+IE + RL M+ + Y Y LID L K GKVD A ++
Sbjct: 368 PDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427
Query: 266 FE 267
F+
Sbjct: 428 FD 429
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 19/285 (6%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ LCK G V A L L + I PN+ +N V+ + D++ L+ ++
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGI-RPNSVTFNTVINGLCKGGKFDVACTFLEKMV 467
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ + Y+ F T + L FI+E++Q S + +I K R
Sbjct: 468 SAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527
Query: 121 KALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
A I+ + L C PD++TY + GR+++ N MK+ G++ D ++YNTL+
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTY----------------TALIDSFGRTGNI 224
+ I + D + + M P+ T+ S +T +
Sbjct: 588 DGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIEL 647
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ LF MK+ + S Y ++++ + ++D ++ M
Sbjct: 648 ADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHM 692
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
Y RA D ++ +V+ N +I + +++Q++ A +FD +
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
D ++Y +++ GRV++ L F +++ PD ++ L+ L RR +
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGE 247
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
L ++M E G +P Y AL+D + R EE+ ++ N+M + P +++
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVV 307
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+ + G++ A+ +FE M
Sbjct: 308 NAYCREGRMSGAVRVFESM 326
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 136 PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIY 195
P TYN ++ L R + + M +G PD ++N+L+ + ++LD+
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 196 FREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
F +M G D ++Y ALI+ F TG ++E+L LF +++Q P +Y + +L+ L
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242
Query: 256 MGKVDLAMTIFEEM 269
+ + + + ++M
Sbjct: 243 ARRGEEGLYMLQKM 256
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 140 TYNIVLDILGRVGRVNDMLNEFASMKEAGV-VPDFISYNTLLNNLRKIRRLDL--CLIYF 196
T+ +L R ML FA M G P +YN L+ L RR DL Y
Sbjct: 95 TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRAL--CRRADLRHAQRYL 152
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
M SG +PD T+ +LI + RT ++ + LF+ M + Y +LI+ +
Sbjct: 153 SLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCET 212
Query: 257 GKVDLAMTIFEEMN 270
G+VD A+ +F E+
Sbjct: 213 GRVDEALELFRELE 226
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 110/285 (38%), Gaps = 29/285 (10%)
Query: 5 YIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLLVS 62
+IE LCK + + + K++ P+ N +V + + L+ +I ++
Sbjct: 481 FIENLCKTKGSREGLSFIDEMLQKDV-KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSL 539
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV-----NRIIFAFAKSR 117
+ YT RA+ C + + E V + + I+V N +I
Sbjct: 540 GCSPDVVTYTTSVRAY-----CNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIG 594
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVL----------DI------LGRVGRVNDMLNEF 161
+ + A+ I H+ G+ P+ T+ I+L D+ + + + D+ F
Sbjct: 595 KTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELF 654
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
MK+ V +Y +L + RRLD M E + + YT+L++ F +
Sbjct: 655 ELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKL 714
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIF 266
++ L M P++ Y+ L+ G+ D A IF
Sbjct: 715 RMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIF 759
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 64/154 (41%)
Query: 100 PESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLN 159
P S I+ F++ R++++ + H+K + Y +++ ++ D
Sbjct: 663 PSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWA 722
Query: 160 EFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
SM G +P+ ISY LL+ + D FR + D + + +ID
Sbjct: 723 LLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLI 782
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNL 253
R G+ + + + ++Q + +PS Y L + L
Sbjct: 783 RQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI--KGLK-------------C 134
F EE++ P + N ++ K +I +A L+F I +GL+ C
Sbjct: 212 FYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYC 271
Query: 135 K--------------------PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFI 174
K PD+ TY+++++ L + G+++D F M + G+VP+ +
Sbjct: 272 KSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
++ TL+N R DL + +++M G+KPD++TY LI+ + G++ E+ +L +M
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Q+ ++P + Y LID K G ++ A+ I +EM
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 13/274 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N + +LCK ++ A L + + + P ++N ++ ++ ++D F+ LK +
Sbjct: 229 NVLMHRLCKEHKINEAQLLFGEIGKRGL-RPTVVSFNTLINGYCKSGNLDQGFR-LKRFM 286
Query: 61 VSSRTLSSDCYT-----NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
+ +R D +T N DD +L F+E + P + +I
Sbjct: 287 MENRVFP-DVFTYSVLINGLCKEGQLDDANKL--FLEMCDRGLVPNDVTFTT-LINGHCV 342
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFIS 175
+ + + + I+ + KPD+ITYN +++ L +VG + + M + G+ PD +
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402
Query: 176 YNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK 235
Y L++ K L+ L +EM + GI+ D + +TALI F R G + E+ R +M
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462
Query: 236 QQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ I+P Y +I K G V + +EM
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 11/271 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
NGY CK+GN+ RL + + + +F P+ Y+ ++ + +D + ++ ++
Sbjct: 268 NGY----CKSGNLDQGFRLKRFMMENRVF-PDVFTYSVLINGLCKEGQLDDANKLFLEMC 322
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
+ +T +T + +++++ +I N +I K +
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382
Query: 121 KA--LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+A L+I +GLK PD TY +++D + G + L M + G+ D +++
Sbjct: 383 EAKKLVIEMTQRGLK--PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ + ++ REM E+GIKPD TYT +I F + G+++ +L +M+
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y L++ L K G++ A + + M
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 79/148 (53%)
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLN 181
A ++ I PD+ +N+++ L + ++N+ F + + G+ P +S+NTL+N
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268
Query: 182 NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRP 241
K LD R M E+ + PD+ TY+ LI+ + G ++++ +LF +M + + P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328
Query: 242 SIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + +LI+ G+ DL M I+++M
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQM 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 9/183 (4%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N I LCK G++ A +L+ + + + P+ Y ++ + D++ + +I K+++
Sbjct: 369 NTLINGLCKVGDLREAKKLVIEMTQRGL-KPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIE 120
L + +T F + + E+++ +I F K ++
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVK 487
Query: 121 KALLIFDHIKGLKCK---PDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
F +K ++C P ++TYN++L+ L + G++ + +M GVVPD I+YN
Sbjct: 488 TG---FKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYN 544
Query: 178 TLL 180
LL
Sbjct: 545 ILL 547
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 3/248 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I LCK G + A +L + D+ + +PN + ++ T DL +I + +L
Sbjct: 302 INGLCKEGQLDDANKLFLEMCDRGL-VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y D + + E+ Q +I K +E AL
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
I + + D + + ++ R G+V + M EAG+ PD +Y +++
Sbjct: 421 EIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGF 480
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K + +EM G P ++TY L++ + G ++ + L + M + P
Sbjct: 481 CKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDD 540
Query: 244 YVYRSLID 251
Y L++
Sbjct: 541 ITYNILLE 548
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/122 (19%), Positives = 59/122 (48%)
Query: 139 ITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFRE 198
+ ++++++ G +D + F +++ + F S L + L K+ ++ E
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215
Query: 199 MGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGK 258
+ + G PD+ + L+ + I E+ LF ++ ++ +RP++ + +LI+ K G
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 259 VD 260
+D
Sbjct: 276 LD 277
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 12/172 (6%)
Query: 104 IVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFAS 163
IV N +I + + ++KAL I ++ + + D+ TYN + L R R+++ N
Sbjct: 319 IVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRI 378
Query: 164 MKEAGVVPDFISYNTLLN------NLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M E GV P+ +SY TL++ ++ + RRL FREM +G +P L+TY ++D
Sbjct: 379 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRL------FREMAGNGAEPSLVTYNVMMDG 432
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ + G+I E+ R +M+++ + P IY Y +L+ GKVD+A+ +FEEM
Sbjct: 433 YIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEM 484
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I CK G + AA L+ ++ + + + +N ++ N +D + +I +++
Sbjct: 290 INGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI--KMIMEKM 347
Query: 65 TLSSDCYT------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D YT RA M + L I IE+ V+ P + I +
Sbjct: 348 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVR---PNHVSYTTLISIHCNEGDM 404
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+E A +F + G +P L+TYN+++D + G + + M++ G+VPD SY
Sbjct: 405 VE-ARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAA 463
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ ++D+ L F EM + G KP+L+ YTALI + G EE+ +L+++M
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523
Query: 239 IRPSIYVYRSLIDNLK 254
+ P +Y +L+ +L
Sbjct: 524 LTPDDALYSALVGSLH 539
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLLVSS 63
++ CK+G V+ A +LL + + + NA YN +L A D D ++LK +
Sbjct: 150 VDGYCKSGRVAHARQLLDEMPRHGVKV-NALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ YT D T++ EE+ + + +I A+ ++ + +A
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+FD G +P+ TY +++ ++G++ M+ GV + I +NT+++
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ +D L M + GI+ D+ TY L R ++E+ L M ++ +RP+
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 388
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y +LI G + A +F EM
Sbjct: 389 VSYTTLISIHCNEGDMVEARRLFREM 414
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 113/260 (43%), Gaps = 2/260 (0%)
Query: 12 AGNVSAAVRLLQSLRDK--NIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSD 69
AG++ A LL+ + P + + V+ ++ + + Q+L ++ +++
Sbjct: 120 AGHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 179
Query: 70 CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHI 129
CY + A+ D ++ ++ + ++ ++ + +R I K +F+ +
Sbjct: 180 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 239
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
K D+ Y+ V++ R G V F G+ P+ +Y L+N KI ++
Sbjct: 240 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 299
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + +M G+ + + + +ID + R ++++L + M++ I +Y Y +L
Sbjct: 300 EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTL 359
Query: 250 IDNLKKMGKVDLAMTIFEEM 269
L++ ++D A + M
Sbjct: 360 ACGLRRANRMDEAKNLLRIM 379
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
G + D+L + A+ V P +S + +++ K R+ EM G+K +
Sbjct: 121 GHLDTAADLLKQAATSCPDSVTP--LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEE 268
L Y +L+D++ R + + + M+ + I P++ Y L+D L + +FEE
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 238
Query: 269 MNS 271
M S
Sbjct: 239 MKS 241
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 102/193 (52%)
Query: 77 AFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKP 136
F + + + ++++V++ + +I + +A+ + D + C+P
Sbjct: 157 GFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP 216
Query: 137 DLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYF 196
DL+TY V++ L + G + LN M+ A + + + Y+T++++L K R D L F
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 197 REMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKM 256
EM G++P+++TY++LI G ++ RL +DM +++I P++ + +LID K
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 257 GKVDLAMTIFEEM 269
GK+ A ++EEM
Sbjct: 337 GKLVKAEKLYEEM 349
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 138/282 (48%), Gaps = 29/282 (10%)
Query: 6 IEKLCKAGNVSAAVRLLQSLR----DKNIFLPNAYNCVLVASAETNDIDLSFQILKDL-- 59
+ LCK G+ A+ LL + + N+ + Y+ V+ + + D + + ++
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVI---YSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 60 ------LVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAF 113
+++ +L S C N+ R D ++LL ++++ +++ + +I AF
Sbjct: 282 KGVRPNVITYSSLIS-CLCNYGR----WSDASRLL---SDMIERKINPNLVTFSALIDAF 333
Query: 114 AKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD---ILGRVGRVNDMLNEFASMKEAGVV 170
K ++ KA +++ + P++ TY+ +++ +L R+G ML M +
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE---LMIRKDCL 390
Query: 171 PDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRL 230
P+ ++YNTL+N K +R+D + FREM + G+ + +TYT LI F + + + + +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 231 FNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
F M + P+I Y L+D L K GK+ AM +FE + S
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 492
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 103/199 (51%)
Query: 71 YTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIK 130
+T + + ++ + I+ +VQ ++ ++ K + AL + + ++
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME 245
Query: 131 GLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLD 190
K + +++ Y+ V+D L + +D LN F M+ GV P+ I+Y++L++ L R
Sbjct: 246 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS 305
Query: 191 LCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+M E I P+L+T++ALID+F + G + ++ +L+ +M ++ I P+I+ Y SLI
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 251 DNLKKMGKVDLAMTIFEEM 269
+ + ++ A + E M
Sbjct: 366 NGFCMLDRLGEAKQMLELM 384
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 126/263 (47%), Gaps = 3/263 (1%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LCK + A+ L + +K + PN Y+ ++ + ++L D++
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGV-RPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ ++ AF+ + EE+++ + +I + +I F ++ +A
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ + + C P+++TYN +++ + RV+ + F M + G+V + ++Y TL++
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R D + F++M G+ P++LTY L+D + G + +++ +F +++ + P I
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498
Query: 244 YVYRSLIDNLKKMGKVDLAMTIF 266
Y Y +I+ + K GK + F
Sbjct: 499 YTYNIMIEGMCKAGKWKMGGIYF 521
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 93/180 (51%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F E++ + ++ N +I F + ++ AL + + L +PD++T N +L+
Sbjct: 100 FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R++D + M E G PD +++ TL++ L + + M + G +PDL+
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV 219
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY A+++ + G+ + +L L N M+ +I ++ +Y ++ID+L K D A+ +F EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
SII ++++ A AK + + + + ++ L +L TYNI+++ R R++ L
Sbjct: 77 SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 136
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M + G PD ++ N+LLN R+ + +M E G KPD +T+T LI
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
E++ L + M Q+ +P + Y ++++ L K G DLA+ + +M ++
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA 247
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 128/269 (47%), Gaps = 6/269 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVSSRT 65
I +C++G + A++L + D++ + PNA ++ + L S
Sbjct: 134 ISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAALLSKASQFG 193
Query: 66 LSSDCYT--NFARAFIMTDDCTQLLIFIEEVVQ--IASPESIIVVNRIIFAFAKSRQIEK 121
S + Y FI + E +Q + SP+ + N +I K ++K
Sbjct: 194 CSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPD-VWSFNVVIKGVCKVGDVQK 252
Query: 122 ALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGV-VPDFISYNTLL 180
AL + + + C PD +T+NI+++ L R V+ ++ GV +P+ ++Y +++
Sbjct: 253 ALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVI 312
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
+ K R++ + + +M G P+++TY LI+ +G+ GN+ ++ ++ M ++
Sbjct: 313 SGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCL 372
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + + SLID + G++D AM I+ EM
Sbjct: 373 PDVVTFSSLIDGYCRCGQLDDAMKIWTEM 401
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 128/264 (48%), Gaps = 10/264 (3%)
Query: 13 GNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILK---DLLVSSRTLS 67
G V AV L + ++ P+ ++N V+ + D+ + ++++ + S T++
Sbjct: 212 GRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVT 271
Query: 68 SDCYTN-FARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIF 126
+ N RA ++ L + V + +++ +I + K+ ++E A+ ++
Sbjct: 272 HNILVNGLCRAKEVSKGREVLRRLQRDGVCM---PNVVTYTSVISGYCKAGRMEDAMAVY 328
Query: 127 DHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKI 186
+ + + P+++TYN++++ G+ G + + + M +PD +++++L++ +
Sbjct: 329 NDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRC 388
Query: 187 RRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMK-QQQIRPSIYV 245
+LD + + EM + I+P+ T+ +I +F + E+L M + I P ++
Sbjct: 389 GQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFI 448
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEM 269
Y +ID L K GKVD A I EM
Sbjct: 449 YNPVIDVLCKGGKVDEANMILIEM 472
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 128/271 (47%), Gaps = 5/271 (1%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA--YNCVLVASAETNDIDLSFQILKDLL 60
N I+ +CK G+V A+ L++ + D+ P+ +N ++ ++ ++L+ L
Sbjct: 238 NVVIKGVCKVGDVQKALELVERM-DEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQ 296
Query: 61 VSSRTLSSD-CYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQI 119
+ + YT+ + + ++V + + +++ N +I + K+ +
Sbjct: 297 RDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNM 356
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
A+ ++ + +C PD++T++ ++D R G+++D + + M + + P+ ++ +
Sbjct: 357 GSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCII 416
Query: 180 LNNLRKIRRLDLCLIYFREMG-ESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
++ K R L + ++M + I P Y +ID + G ++E+ + +M+++
Sbjct: 417 IHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKG 476
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
RP Y Y LI G++ A+T F +M
Sbjct: 477 CRPDKYTYTILIIGHCMKGRIAEAVTFFHKM 507
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 6/273 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ LC+A VS +L+ L+ + +PN Y V+ + ++ + + D++
Sbjct: 276 VNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVG 335
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
+ + Y + + + ++++ ++ + +I + + Q++ A+
Sbjct: 336 TSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAM 395
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMK-EAGVVPDFISYNTLLNN 182
I+ + +P+ T+ I++ + R + L+ M + P YN +++
Sbjct: 396 KIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDV 455
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
L K ++D + EM E G +PD TYT LI G I E++ F+ M + P
Sbjct: 456 LCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPD 515
Query: 243 IYVYRSLIDNLKKM---GKVDLAMTIFEEMNSS 272
V S I L K G+VD M I SS
Sbjct: 516 SIVVNSFISCLLKSGMPGEVDHIMRIAAGGASS 548
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 99/179 (55%)
Query: 91 IEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGR 150
++ + ++ ++ N +++ ++ ++ +A +FD + CKPD+ +Y+I+++ +
Sbjct: 208 LKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCK 267
Query: 151 VGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
R+++ F M G P+ +SYNTL++ L ++ RL F+ M +G P+L T
Sbjct: 268 AKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYT 327
Query: 211 YTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y L+D F + G + ++ RLF M+ ++P++ +Y L++ + K G + A +F E+
Sbjct: 328 YAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSEL 386
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%)
Query: 95 VQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRV 154
+++ +I+ +I K + +A+ +FD + C+PD TY +++ L ++G
Sbjct: 37 IKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGET 96
Query: 155 NDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTAL 214
F M+EAG + ++Y+TL+++L K RR++ L F M I P + TYT+L
Sbjct: 97 ALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSL 156
Query: 215 IDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
I +E+ L N+M I P++ + L+D K GKV A + + M
Sbjct: 157 IQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTM 211
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Query: 99 SPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDML 158
SP + +N +I F + ++++ + L +P ++T+ +++ LG+VG+ +
Sbjct: 7 SPNTC-TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65
Query: 159 NEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSF 218
F M G PD +Y T++N L KI L F++M E+G + +++TY+ LI S
Sbjct: 66 ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 219 GRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ + E+L +F+ MK + I P+I+ Y SLI L + A + EM S
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 132/279 (47%), Gaps = 6/279 (2%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ LC A LL + NI +PN +N ++ + + + +LK +
Sbjct: 157 IQGLCNFSRWKEASALLNEMTSLNI-MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMG 215
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y + + M + + + ++ + + +I + K+++I++A
Sbjct: 216 VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAK 275
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ + P+ ++YN ++ L ++GR+ + + F +M G +P+ +Y LL+
Sbjct: 276 QLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGF 335
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K L FR M + +KP+L+ Y L+++ ++GN++++ LF+++ ++P++
Sbjct: 336 CKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNV 395
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSSLSDLAGPKDF 282
+Y ++I+ L K G +D A+ F M D P +F
Sbjct: 396 QIYTTIINGLCKEGLLDEALEAFRNME---DDGCPPDEF 431
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 13/274 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA-------ETNDIDLSFQILKD 58
I LCK G + A L + + + L L+ S E DI S+ KD
Sbjct: 87 INGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDI-FSYMKAKD 145
Query: 59 LLVSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ S T+ + YT+ + + + E+ + +++ N ++ F K +
Sbjct: 146 I---SPTIFT--YTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGK 200
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
+ A + + + +PD++TYN ++ V + F M G PD SY+
Sbjct: 201 VLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSI 260
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L+N K +R+D F EM G P+ ++Y LI + G + E+ LF +M
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNG 320
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
P++Y Y L+D K G + A +F M S+
Sbjct: 321 NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQST 354
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 66/109 (60%)
Query: 164 MKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGN 223
M+ AG+ P+ + N L+N +++R+DL + + G++P ++T+T LI+ G+ G
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 224 IEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+++ LF+DM + +P Y Y ++I+ L K+G+ LA +F++M +
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEA 109
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 122/272 (44%), Gaps = 9/272 (3%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLL 60
N ++ CK G V AA +L+++ + + P+ YN ++ + ++ + ++ ++
Sbjct: 189 NVLVDTFCKEGKVLAAEGVLKTMTEMGV-EPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247
Query: 61 VSSRTLSSDCYTNFARAFIMT---DDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
Y+ + D+ QL F E + Q ++P ++ N +I +
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQL--FNEMIHQGSTPNNV-SYNTLIHGLCQLG 304
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ +A +F ++ P+L TY I+LD + G + F +M+ + P+ + YN
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L+N + K L F E+ G++P++ YT +I+ + G ++E+L F +M+
Sbjct: 365 ILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDD 424
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
P + Y +I + A+ + EM
Sbjct: 425 GCPPDEFSYNVIIRGFLQHKDESRAVHLIGEM 456
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
F K + KA +F ++ KP+L+ YNI+++ + + G + D F+ + G+ P
Sbjct: 334 GFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQP 393
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLF 231
+ Y T++N L K LD L FR M + G PD +Y +I F + + ++ L
Sbjct: 394 NVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLI 453
Query: 232 NDMKQQ 237
+M+ +
Sbjct: 454 GEMRDR 459
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
++++ N ++ A KS ++ A +F + + +P++ Y +++ L + G +++ L F
Sbjct: 359 NLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLT 210
+M++ G PD SYN ++ + + + EM + G D T
Sbjct: 419 RNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++++++ +++ NRII ++ ++ ++ A+ +F ++ C+PD +TY ++DI
Sbjct: 401 LLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHA 460
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ + + M++AG+ PD +Y+ ++N L K L+ F M + G P+L+
Sbjct: 461 KSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLV 520
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N E +L+L+ DM+Q P Y +++ L G ++ A IF EM
Sbjct: 521 TYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEM 580
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 88/164 (53%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I +++Q + D + C+P+++TYN ++ GR + D +N F M+EAG
Sbjct: 385 MIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAG 444
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K LD+ + + +M ++G+ PD TY+ +I+ G+ G++ +
Sbjct: 445 CEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAH 504
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
RLF M + P++ Y +I K ++A+ ++ +M S
Sbjct: 505 RLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQS 548
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEK------ALLIFDHIKGL-KCKPDLITYNIVLDILGR 150
A+ E+I +N I A+ ++ +++ AL F +K L + + D TY ++ +LGR
Sbjct: 332 AAEEAIGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGR 391
Query: 151 VGR---VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ +N +L++ M + G P+ ++YN ++++ + L + F++M E+G +PD
Sbjct: 392 AKQFAAINKLLDQ---MIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPD 448
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+TY LID ++G ++ ++ ++ M+ + P + Y +I+ L K G ++ A +F
Sbjct: 449 RVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFC 508
Query: 268 EM 269
M
Sbjct: 509 RM 510
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 78/149 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N +I AK+R E AL ++ ++ +PD +TY IV+++LG G + + F
Sbjct: 518 NLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIF 577
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M++ VPD Y L++ K + ++ M ++G+KP++ T +L+ +F R
Sbjct: 578 IEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRV 637
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ ++ +L M ++PS+ Y L+
Sbjct: 638 HQLSDAYQLLQSMLTFGLKPSLQTYTLLL 666
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 79/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K+ + A +F + C P+L+TYNI++ + + L + M+++G
Sbjct: 490 MINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSG 549
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y ++ L L+ F EM + PD Y L+D +G++GN++++
Sbjct: 550 FEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAW 609
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ M + ++P++ SL+ ++ ++ A + + M
Sbjct: 610 EWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSM 650
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 55/98 (56%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y T++ L + ++ +M + G +P+++TY +I S+GR +++++ +F M
Sbjct: 381 TYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQM 440
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ P Y +LID K G +D+AM ++E+M +
Sbjct: 441 QEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDA 478
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 98/180 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
++++++ +++ NRII ++ ++ ++ A+ +F ++ C+PD +TY ++DI
Sbjct: 401 LLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHA 460
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
+ G ++ + + M++AG+ PD +Y+ ++N L K L+ F M + G P+L+
Sbjct: 461 KSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLV 520
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
TY +I + N E +L+L+ DM+Q P Y +++ L G ++ A IF EM
Sbjct: 521 TYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEM 580
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 88/164 (53%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I +++Q + D + C+P+++TYN ++ GR + D +N F M+EAG
Sbjct: 385 MIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAG 444
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y TL++ K LD+ + + +M ++G+ PD TY+ +I+ G+ G++ +
Sbjct: 445 CEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAH 504
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
RLF M + P++ Y +I K ++A+ ++ +M S
Sbjct: 505 RLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQS 548
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 98 ASPESIIVVNRIIFAFAKSRQIEK------ALLIFDHIKGL-KCKPDLITYNIVLDILGR 150
A+ E+I +N I A+ ++ +++ AL F +K L + + D TY ++ +LGR
Sbjct: 332 AAEEAIGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGR 391
Query: 151 VGR---VNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPD 207
+ +N +L++ M + G P+ ++YN ++++ + L + F++M E+G +PD
Sbjct: 392 AKQFAAINKLLDQ---MIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPD 448
Query: 208 LLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
+TY LID ++G ++ ++ ++ M+ + P + Y +I+ L K G ++ A +F
Sbjct: 449 RVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFC 508
Query: 268 EM 269
M
Sbjct: 509 RM 510
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 78/149 (52%)
Query: 102 SIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEF 161
+++ N +I AK+R E AL ++ ++ +PD +TY IV+++LG G + + F
Sbjct: 518 NLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIF 577
Query: 162 ASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
M++ VPD Y L++ K + ++ M ++G+KP++ T +L+ +F R
Sbjct: 578 IEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRV 637
Query: 222 GNIEESLRLFNDMKQQQIRPSIYVYRSLI 250
+ ++ +L M ++PS+ Y L+
Sbjct: 638 HQLSDAYQLLQSMLTFGLKPSLQTYTLLL 666
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 79/161 (49%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K+ + A +F + C P+L+TYNI++ + + L + M+++G
Sbjct: 490 MINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSG 549
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD ++Y ++ L L+ F EM + PD Y L+D +G++GN++++
Sbjct: 550 FEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAW 609
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
++ M + ++P++ SL+ ++ ++ A + + M
Sbjct: 610 EWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSM 650
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 55/98 (56%)
Query: 175 SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDM 234
+Y T++ L + ++ +M + G +P+++TY +I S+GR +++++ +F M
Sbjct: 381 TYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQM 440
Query: 235 KQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
++ P Y +LID K G +D+AM ++E+M +
Sbjct: 441 QEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDA 478
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 2/268 (0%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I L AG V+ A L P AYN +L + + Q+L ++
Sbjct: 270 ISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCG 329
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y+ A+ I ++E+ S V +RI+ F +KA
Sbjct: 330 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAF 389
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+ ++ +PD YN+++D G+ + ++ F M+E G+ PD +++NTL++
Sbjct: 390 AVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAH 449
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
K R D F EM ES P TY +I+ G + E + ++MK+Q + P+I
Sbjct: 450 CKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNI 509
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
Y +L+D + G+ A+ E M +
Sbjct: 510 ITYTTLVDVYGRSGRYKEAIDCIEAMKA 537
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 19 VRLLQSLRDKNIFLPN--AYNCVLVA---SAETNDIDLSFQILKDL----LVSSRTLSSD 69
+RLL LR+ + FLP+ +Y+ +L + + + D L ++L DL L L SD
Sbjct: 175 LRLLSLLREHD-FLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 70 CYTNFARAFI------------------MTDDCTQLLIFIEEVVQIASPESIIV------ 105
+ FARA + ++ T L+ + ++A E++ +
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293
Query: 106 --------VNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDM 157
N ++ + + ++ A + D + PD TY++++D R GR
Sbjct: 294 EIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353
Query: 158 LNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDS 217
M+ GV P ++ +L R REM SG++PD Y +ID+
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDT 413
Query: 218 FGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
FG+ + ++ FN M+++ I P + + +LID K G+ D A +FEEM S
Sbjct: 414 FGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRES 468
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 118/269 (43%), Gaps = 19/269 (7%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPNAY--NCVLVASAETNDIDLSFQILKDLLVSS 63
++ +AG +A LL+ + + P++Y + +L + D +F +L+++ S
Sbjct: 341 VDAYTRAGRWESARILLKEMEADGV-KPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
Y F + + ++ + ++ N +I A K + ++A
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAA 459
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNL 183
+F+ ++ C P TYNI++++LG + + MKE G+VP+ I+Y TL++
Sbjct: 460 ELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
Query: 184 RKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
+ R + M G+KP Y AL++++ + G +RP +
Sbjct: 520 GRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRG----------------LRPDV 563
Query: 244 YVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
Y +L+ L ++ + D I+EEM +S
Sbjct: 564 ITYTTLMKALIRVEQFDKVPVIYEEMITS 592
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 19/137 (13%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
EE+ + P N +I + E + +K P++ITY ++D+ G
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 150 RVGRVNDMLNEFASMK-------------------EAGVVPDFISYNTLLNNLRKIRRLD 190
R GR + ++ +MK + G+ PD I+Y TL+ L ++ + D
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVEQFD 580
Query: 191 LCLIYFREMGESGIKPD 207
+ + EM SG PD
Sbjct: 581 KVPVIYEEMITSGCAPD 597
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
IE AL +F +I KPD+ +YN ++D L R GR+ + L+ F+ M + P ++Y
Sbjct: 181 HIEDALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYT 236
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
T+++ L + D L F EMG G+ P+L+TY++LID + G +L L + M ++
Sbjct: 237 TVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMIKE 296
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+ P++ Y S+ID L K + AM I + M
Sbjct: 297 KKLPNMITYSSVIDGLCKEHMLSEAMEILDRM 328
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 14/273 (5%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNA---YNCVLVASAETNDIDLSFQILKDLL 60
G + + AA+ L +S ++ LP++ YN VL A + + L+ +L D+
Sbjct: 98 GLLRAFSRTHRPLAALHLFRSA-PSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMR 156
Query: 61 VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQ----IASPESIIVVNRIIFAFAKS 116
+ ++ Y +A C+ IE+ ++ I P+ + N II +
Sbjct: 157 AAGFAPTAATYNVLLKAH-----CSDAAAHIEDALRLFRNIPKPD-VCSYNTIIDGLCRR 210
Query: 117 RQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISY 176
++ +AL +F + G P ++TY V+ L R G +D L F M GV P+ ++Y
Sbjct: 211 GRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTY 270
Query: 177 NTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQ 236
++L++ L K R L M + P+++TY+++ID + + E++ + + M+
Sbjct: 271 SSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRL 330
Query: 237 QQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Q +P ++ LI L G+ A +EM
Sbjct: 331 QGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEM 363
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
+F E V + +P +++ +I A+ + AL IF + P+L+TY+ ++D L
Sbjct: 219 MFSEMVGKCIAP-TVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGL 277
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ GR L M + +P+ I+Y+++++ L K L + M G KPD
Sbjct: 278 CKGGRATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDA 337
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVY 246
+ LI G E+ ++M I P+ +
Sbjct: 338 GLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTW 375
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 87 LLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLD 146
L IF E + SP +++ + +I K + AL + D + K P++ITY+ V+D
Sbjct: 252 LKIFHEMGRRGVSP-NLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVID 310
Query: 147 ILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKP 206
L + +++ + M+ G PD + L+ L R Y EM +GI+P
Sbjct: 311 GLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEP 370
Query: 207 DLLTY-----------TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID---- 251
+ +T+ TAL D G + + +++ + + I + L++
Sbjct: 371 NRVTWSLHARINNTVLTALCDK----GELGRAFQVYQSTRTRSISTDPTTFHLLVESFSK 426
Query: 252 -NLKKMGKVDLAM 263
N++K +V L M
Sbjct: 427 NNIEKAARVVLDM 439
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 99/181 (54%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F EE ++ P S+ N ++ +F K +I A +FD I +P ++++N +++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
++G +++ +M+ +GV PD +Y+ L+N L K ++D F EM ++G+ P+ +
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q + P + Y +LI L K G + A + +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K +++ A +FD + P+ +T+ ++D + GRV+ + + M
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQS 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
+ PD I+YNTL+ L K L EM G+KPD +TYT LID + G++E +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +LI L + G+ A + EM S
Sbjct: 332 EYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLS 374
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 17/265 (6%)
Query: 17 AAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSSRTLSSDCY 71
+RL QS+ D K P+ ++N ++ + D+D F+ LK+ + +S + D Y
Sbjct: 150 GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFR-LKNAMQAS-GVQPDVY 207
Query: 72 T------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLI 125
T + M DD +L +E++ + + +I K+ +++ A+ I
Sbjct: 208 TYSVLINGLCKESKM-DDANELF---DEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
Query: 126 FDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRK 185
+ + PDLITYN ++ L + G + + M G+ PD I+Y TL++ K
Sbjct: 264 YXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 186 IRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYV 245
L+ Y + M + I+ D + YTALI + G ++ ++ +M ++P I
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383
Query: 246 YRSLIDNLKKMGKVDLAMTIFEEMN 270
Y +I+ K G V + +EM
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQ 408
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 89 IFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDIL 148
I+ + + Q SP+ +I N +I+ K +++A + D + KPD ITY ++D
Sbjct: 263 IYXQMLSQSLSPD-LITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGS 321
Query: 149 GRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDL 208
+ G + M + + D ++Y L++ L + R REM G+KP++
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381
Query: 209 LTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSI 243
TYT +I+ F + G++ +L +M++ PS+
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + +I A+ +S + A+ + K K + T V++ L ++ + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
E G +N L+++ K + L F + + G++P ++++ L++ + + G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL N M+ ++P +Y Y LI+ L K K+D A +F+EM
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 232
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%)
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
G + D + + KE F + ++ +L K++ L ++ E E G L +
Sbjct: 80 GFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFF 139
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
L+ SF + G I + +F+ + + +RPS+ + +L++ K+G +D + M +
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199
Query: 272 S 272
S
Sbjct: 200 S 200
>gi|224576643|gb|ACN56995.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%)
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
++ + +F+++ KP++ Y +++D + G V D + M + G PD ++Y+
Sbjct: 2 KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
++N L K R++ L YF+ +G + Y++LID G+ G I+E+ RLF +M ++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCRXNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEK 121
Query: 238 QIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y Y +LID L K GKVD AMT+F+ M
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 153
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 11 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 70
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G + Y++L++ L K R+D F EM E G D Y
Sbjct: 71 GRVEEALDYFQTCRXNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 130
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
ALID+ + G ++E++ LF M++++ ++Y Y LI + K + + A+ +++ M
Sbjct: 131 NALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMM 189
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 83/204 (40%), Gaps = 39/204 (19%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
I+ K+G+V A+RLL + D+ F P+ Y+ V+ + ++ + + +
Sbjct: 29 IDGYAKSGSVEDAIRLLHRMIDEG-FKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNG 87
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKAL 123
++S Y++ +I K+ +I++A
Sbjct: 88 XAINSXFYSS-----------------------------------LIDGLGKAGRIDEAE 112
Query: 124 LIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM-KEAGVVPDFISYNTLLNN 182
+F+ + C D YN ++D L + G+V++ + F M +E G +Y L++
Sbjct: 113 RLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISG 172
Query: 183 LRKIRRLDLCLIYFREMGESGIKP 206
+ K R + L + M + GI P
Sbjct: 173 MFKDHRNEEALKLWDMMIDKGITP 196
>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 913
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 138/286 (48%), Gaps = 22/286 (7%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASAETNDIDLSFQILKDLLVS 62
N +E LC G V A + S+ DK++ + Y ++ + N + ++ L V
Sbjct: 517 NVVVESLCMGGKVKEAEAVFNSIEDKSL---DNYFAMINGYCKANHTAGAAKLFFRLSVK 573
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKS---RQI 119
S CY N + D +L+ +E ++ + S + ++ + ++ +
Sbjct: 574 GHVKRSCCY-NLLKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGM 632
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
KA +FD + PDLI Y I++ R+ + + ++ F MK+ G+ PD +++ L
Sbjct: 633 RKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVL 692
Query: 180 LNNLRK--IRRL-----------DL--CLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
L+ K I+++ D+ L + EM ++ IKPD++ YT LID + + ++
Sbjct: 693 LDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSL 752
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
+++ +F++M ++ + P I Y +L+ + G VD A+ + ++M+
Sbjct: 753 HDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMS 798
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 4 GYIEKLCKAGNVSAAVRLLQSLRDKNIFLP-NAYNCVLVASAETNDIDLSFQILKDLLVS 62
YIE LC ++LQ+ + NI L AY + D + +L+D+
Sbjct: 273 AYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKE 332
Query: 63 SRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKA 122
CYT F + + F+ E++ + ++V I+ + +
Sbjct: 333 GMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEV 392
Query: 123 LLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNN 182
+ F+ K L D ++YN V+D L ++G++ + + MK + D + Y TL+N
Sbjct: 393 VDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLING 452
Query: 183 LRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPS 242
+ F EM E+GI+ D++TY L+ F R G E+L L + M+ Q+++P+
Sbjct: 453 YCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPN 512
Query: 243 IYVYRSLIDNLKKMGKVDLAMTIFEEM 269
Y ++++L GKV A +F +
Sbjct: 513 SITYNVVVESLCMGGKVKEAEAVFNSI 539
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 122/272 (44%), Gaps = 11/272 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSR 64
I+ LC G++ A+ +++ + + I AY + DL +Q+L+ ++
Sbjct: 240 IKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANI 299
Query: 65 TLSSDCYTNFARAFIMTDDCTQLLI-FIEEVVQIASPESII----VVNRIIFAFAKSRQI 119
L YT R F C +L E V++ E ++ +I F K+ +
Sbjct: 300 PLDMYAYTVAVRGF-----CNELKFDKAESVLRDMEKEGMVPDMHCYTALICRFCKAGNL 354
Query: 120 EKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTL 179
KA + + K + + +L L +G ++++++F K G+ D +SYN +
Sbjct: 355 LKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNV 414
Query: 180 LNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQI 239
++ L K+ +L+ + EM I D++ YT LI+ + GN+ ++ ++F +M++ I
Sbjct: 415 VDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGI 474
Query: 240 RPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+ Y L+ + G A+ + + M +
Sbjct: 475 EIDVVTYDVLVSGFCRNGLATEALNLLDYMQT 506
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 26/275 (9%)
Query: 1 MCNGYIEKLCKAGNVSAAVRLLQSLRDK-NIFLPNAYNCVLVASAETNDIDLSFQILKDL 59
M NGY CKA + + A +L L K ++ YN +L E D D +L+ +
Sbjct: 550 MINGY----CKANHTAGAAKLFFRLSVKGHVKRSCCYN-LLKNLCEEGDNDGILMLLETM 604
Query: 60 L----VSSRTLSSDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAK 115
L S+ + +T+ RA +F + + +P+ +I +I ++ +
Sbjct: 605 LNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPD-LIAYTIMITSYCR 663
Query: 116 SRQIEKALLIFDHIKGLKCKPDLITYNIVLD---------------ILGRVGRVNDMLNE 160
+++A+ +F +K KPDL+T+ ++LD G + D L
Sbjct: 664 MNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAI 723
Query: 161 FASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGR 220
+ MK+ + PD I Y L++ K+ L + F EM E G++PD++TYTAL+ +
Sbjct: 724 WTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQ 783
Query: 221 TGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKK 255
G+++ ++ L + M + I P +L+ + K
Sbjct: 784 RGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILK 818
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I + N ++ + K+ +++ AL ++ +K L P+ TY IV+ L G + + +
Sbjct: 198 IFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIK 257
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
M+E+G+ P +Y + L DL + + I D+ YT + F
Sbjct: 258 EMEESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNEL 317
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
+++ + DM+++ + P ++ Y +LI K G + A EM S
Sbjct: 318 KFDKAESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMS 366
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 112 AFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVP 171
A + I AL I+ +K + KPD+I Y +++D +V ++D + F M E G+ P
Sbjct: 710 AKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEP 769
Query: 172 DFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRT 221
D I+Y LL+ + +D + +M GI PD T +AL+ +T
Sbjct: 770 DIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILKT 819
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 116/317 (36%), Gaps = 71/317 (22%)
Query: 9 LCKAGNVSAAVRLLQSLRDKNIFLPN-AYNCVLVASAETNDIDLSFQILKDLLVSSRTLS 67
LC+ G S V + +FL +YN V+ A + ++ + +L ++ + +
Sbjct: 383 LCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMD 442
Query: 68 SDCYTNFARAFIMTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFD 127
YT + + EE+ + ++ + ++ F ++ +AL + D
Sbjct: 443 VMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLD 502
Query: 128 HIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE-------------------AG 168
+++ K KP+ ITYN+V++ L G+V + F S+++ AG
Sbjct: 503 YMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSLDNYFAMINGYCKANHTAG 562
Query: 169 VVPDFI------------SYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALID 216
F YN LL NL + D L+ M ++P Y L
Sbjct: 563 AAKLFFRLSVKGHVKRSCCYN-LLKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFT 621
Query: 217 SFGRTGN--------------------------------------IEESLRLFNDMKQQQ 238
S R G ++E++ LF+DMKQ+
Sbjct: 622 SLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRG 681
Query: 239 IRPSIYVYRSLIDNLKK 255
I+P + + L+D K
Sbjct: 682 IKPDLVTFTVLLDGHHK 698
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 27/212 (12%)
Query: 9 LCKAGNVSAAVRLLQSLRD---KNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
LC+AG +A +R QS+ D K + P+ AY ++ + N + + + D+
Sbjct: 623 LCRAGG-AAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDM--KQ 679
Query: 64 RTLSSDCYT-----------------NFARAFIMTDDCTQLLIFIEEVVQIASPESIIVV 106
R + D T + A A +D L E+ +I
Sbjct: 680 RGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFY 739
Query: 107 NRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKE 166
+I + K + A+ +FD + +PD+ITY +L + G V+ +N M
Sbjct: 740 TVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMSL 799
Query: 167 AGVVPDFISYNTLLNNLRKIRRLDL--CLIYF 196
G+ PD + + LL+ + K R+ CL YF
Sbjct: 800 KGISPDTRTMSALLHGILKTRQCSAPQCLKYF 831
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 97/181 (53%)
Query: 90 FIEEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILG 149
F +E+++ P S+ N ++ F K ++ +A +FD I +P ++++N +++
Sbjct: 123 FYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 150 RVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLL 209
R+G +++ ++M +GV PD +Y+ L+N L K ++D F EM + G+ P+ +
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGV 242
Query: 210 TYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
T+T LID + G ++ ++ ++ M Q P + Y +LI L K G + + +EM
Sbjct: 243 TFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEM 302
Query: 270 N 270
+
Sbjct: 303 S 303
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%)
Query: 109 IIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAG 168
+I K ++++A +F+ + P+ +T+ ++D+ + G V+ + + M G
Sbjct: 212 LINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQG 271
Query: 169 VVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESL 228
PD I+YNTL+ L K L EM +G+KPD +TYT LID + G++E +
Sbjct: 272 FSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAF 331
Query: 229 RLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
M ++ IR Y +L+ L + G+ D A +F EM S
Sbjct: 332 EFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLS 374
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
Query: 124 LIFDHIKG-LKC--KPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLL 180
L++D K L+C L +NIV+ + G + + F ++ + G+ P +S+NTL+
Sbjct: 119 LVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 181 NNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIR 240
N ++ LD M SG++PD+ TY+ LI+ + ++E+ LFN+M + +
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLV 238
Query: 241 PSIYVYRSLIDNLKKMGKVDLAMTIFEEMNS 271
P+ + +LID K G VD AM I+++M S
Sbjct: 239 PNGVTFTTLIDVHCKNGMVDSAMEIYKQMLS 269
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 119/272 (43%), Gaps = 13/272 (4%)
Query: 6 IEKLCKAGNVSAAVRLLQSLRDKNIFLPN--AYNCVLVASAETNDIDLSFQILKDLLVSS 63
+ + CK G + A + ++ + P+ ++N ++ D+D F++ + S
Sbjct: 143 MHRFCKEGEMRRAQSVFDAITKWGL-RPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 201
Query: 64 RTLSSDCYTNFARAFIMTDDCTQLLI-----FIEEVVQIASPESIIVVNRIIFAFAKSRQ 118
+ D YT + ++ C + + E++ + + +I K+
Sbjct: 202 --VQPDVYT---YSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGM 256
Query: 119 IEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNT 178
++ A+ I+ + PDLITYN ++ L + G + + M G+ PD I+Y T
Sbjct: 257 VDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTT 316
Query: 179 LLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQ 238
L++ K L+ + + M + I+ D + YTAL+ + G +++ ++F +M
Sbjct: 317 LIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVG 376
Query: 239 IRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMN 270
++P Y +I+ K G V A + +EM
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 13/246 (5%)
Query: 3 NGYIEKLCKAGNVSAAVRLLQSLRDKNIFLPNAYNCVLVASA--ETNDIDLSFQILKDLL 60
NGYI + G++ RL ++ + P+ Y ++ + + + +D + ++ ++L
Sbjct: 179 NGYI----RLGDLDEGFRLKSAMHASGV-QPDVYTYSVLINGLCKESKVDEANELFNEML 233
Query: 61 VSSRTLSSDCYTNFARAFI---MTDDCTQLLIFIEEVVQIASPESIIVVNRIIFAFAKSR 117
+ +T M D + I+ + + Q SP+ +I N +I+ K
Sbjct: 234 DRGLVPNGVTFTTLIDVHCKNGMVDSAME--IYKQMLSQGFSPD-LITYNTLIYGLCKKG 290
Query: 118 QIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYN 177
+++ + D + KPD ITY ++D + G + M + + D ++Y
Sbjct: 291 DLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYT 350
Query: 178 TLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQ 237
L++ L + R D FREM G+KPD TYT +I+ F + G++ + RL +M++
Sbjct: 351 ALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRD 410
Query: 238 QIRPSI 243
P +
Sbjct: 411 GHVPCV 416
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%)
Query: 103 IIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFA 162
I V + ++ A+ +S + A+ F K K T VL+ L ++ + + +
Sbjct: 66 IYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYK 125
Query: 163 SMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTG 222
+ E G +N +++ K + F + + G++P ++++ L++ + R G
Sbjct: 126 EILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLG 185
Query: 223 NIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEM 269
+++E RL + M ++P +Y Y LI+ L K KVD A +F EM
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEM 232
>gi|341605723|gb|AEK82964.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%)
Query: 105 VVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASM 164
V + +I K ++ + +F+++ KP++ Y +++D + G V D + M
Sbjct: 19 VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 78
Query: 165 KEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNI 224
+ G PD ++Y+ ++N L K R++ L YF+ +G+ + + Y++LI G+ G I
Sbjct: 79 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIXGLGKAGRI 138
Query: 225 EESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFEEMNSS 272
+E+ RLF +M ++ Y Y +LID L K GKVD AM +F+ M
Sbjct: 139 DEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEE 186
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 92 EEVVQIASPESIIVVNRIIFAFAKSRQIEKALLIFDHIKGLKCKPDLITYNIVLDILGRV 151
E +++ S ++ + +I +AKS +E A+ + + KPD++TY++V++ L +
Sbjct: 41 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 100
Query: 152 GRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTY 211
GRV + L+ F + + G+ + + Y++L+ L K R+D F EM E G D Y
Sbjct: 101 GRVEEALDYFQTCRFNGLAINSMFYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCY 160
Query: 212 TALIDSFGRTGNIEESLRLFNDMKQQQ-IRPSIYVYRSLIDNLKK 255
ALID+ + G ++E++ LF M++++ ++Y Y LI + K
Sbjct: 161 NALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFK 205
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 130 KGLKCKPDLITYNIVLDILGRVGRVNDMLNEFASMKEAGVVPDFISYNTLLNNLRKIRRL 189
KG++ P + +++V+ L + G++N+ F +M G P+ Y L++ K +
Sbjct: 11 KGIQVPPHV--FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 68
Query: 190 DLCLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSL 249
+ + M + G KPD++TY+ +++ + G +EE+L F + + + Y SL
Sbjct: 69 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSL 128
Query: 250 IDNLKKMGKVDLAMTIFEEMNS 271
I L K G++D A +FEEM+
Sbjct: 129 IXGLGKAGRIDEAERLFEEMSE 150
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 161 FASMKEAGV-VPDFISYNTLLNNLRKIRRLDLCLIYFREMGESGIKPDLLTYTALIDSFG 219
+ M E G+ VP + ++ ++ L K +L+ F M G KP++ YT LID +
Sbjct: 5 YQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63
Query: 220 RTGNIEESLRLFNDMKQQQIRPSIYVYRSLIDNLKKMGKVDLAMTIFE 267
++G++E+++RL + M + +P + Y +++ L K G+V+ A+ F+
Sbjct: 64 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 192 CLIYFREMGESGIKPDLLTYTALIDSFGRTGNIEESLRLFNDMKQQQIRPSIYVYRSLID 251
C+ ++EM E GI+ ++ +I + G + E +F +M ++ +P++ +Y LID
Sbjct: 1 CVALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 252 NLKKMGKVDLAMTIFEEM 269
K G V+ A+ + M
Sbjct: 61 GYAKSGSVEDAIRLLHRM 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.140 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,970,024,989
Number of Sequences: 23463169
Number of extensions: 150333997
Number of successful extensions: 587449
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7561
Number of HSP's successfully gapped in prelim test: 4230
Number of HSP's that attempted gapping in prelim test: 462115
Number of HSP's gapped (non-prelim): 70301
length of query: 287
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 146
effective length of database: 9,050,888,538
effective search space: 1321429726548
effective search space used: 1321429726548
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)