BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023135
(287 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y5K3|PCY1B_HUMAN Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B
PE=1 SV=1
Length = 369
Score = 260 bits (664), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/248 (52%), Positives = 170/248 (68%), Gaps = 16/248 (6%)
Query: 17 PRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE 76
P DRPVRVYADGI+DLFH GHARAL QAK LFPN+YLLVG +D+ THK+KG TVM + E
Sbjct: 72 PADRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAE 131
Query: 77 RYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIG 136
RYE+LRHCR+VDEVI DAPW +T +FL+KH+ID+VAHD +PY+ A DVY+ +K G
Sbjct: 132 RYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSA--GSDDVYKHIKEAG 189
Query: 137 KFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRLRMNMGLKKL 196
F T+RT+GISTSD+I RIV+DY+ Y RNL RGYT KEL VS++ EKR R + K+
Sbjct: 190 MFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKRYRFQNQVDKM 249
Query: 197 REKVKKHQEK----IQIVAKTASMRRNEWVENADRLVAGFLE----------MFEERCHK 242
+EKVK +E+ + V + + +W E + + FLE MF+ER +
Sbjct: 250 KEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELFGPDGAWKQMFQERSSR 309
Query: 243 MGTAIKDR 250
M A+ +
Sbjct: 310 MLQALSPK 317
>sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b
PE=1 SV=2
Length = 369
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/248 (52%), Positives = 170/248 (68%), Gaps = 16/248 (6%)
Query: 17 PRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE 76
P DRPVRVYADGI+DLFH GHARAL QAK LFPN+YLLVG +D+ THK+KG TVM + E
Sbjct: 72 PVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAE 131
Query: 77 RYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIG 136
RYE+LRHCR+VDEVI DAPW +T +FL+KH+ID+VAHD +PY+ A DVY+ +K G
Sbjct: 132 RYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSA--GSDDVYKHIKEAG 189
Query: 137 KFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRLRMNMGLKKL 196
F T+RT+GISTSD+I RIV+DY+ Y RNL RGYT KEL VS++ EK+ R + K+
Sbjct: 190 MFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYRFQNQVDKM 249
Query: 197 REKVKKHQEK----IQIVAKTASMRRNEWVENADRLVAGFLE----------MFEERCHK 242
+EKVK +E+ + V + + +W E + + FLE MF+ER +
Sbjct: 250 KEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELFGPDGAWKQMFQERSSR 309
Query: 243 MGTAIKDR 250
M A+ +
Sbjct: 310 MLQALSPK 317
>sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus
GN=Pcyt1b PE=2 SV=1
Length = 369
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/248 (52%), Positives = 170/248 (68%), Gaps = 16/248 (6%)
Query: 17 PRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE 76
P DRPVRVYADGI+DLFH GHARAL QAK LFPN+YLLVG +D+ THK+KG TVM + E
Sbjct: 72 PVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAE 131
Query: 77 RYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIG 136
RYE+LRHCR+VDEVI DAPW +T +FL+KH+ID+VAHD +PY+ A DVY+ +K G
Sbjct: 132 RYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSA--GSDDVYKHIKEAG 189
Query: 137 KFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRLRMNMGLKKL 196
F T+RT+GISTSD+I RIV+DY+ Y RNL RGYT KEL VS++ EK+ R + K+
Sbjct: 190 MFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYRFQNQVDKM 249
Query: 197 REKVKKHQEK----IQIVAKTASMRRNEWVENADRLVAGFLE----------MFEERCHK 242
+EKVK +E+ + V + + +W E + + FLE MF+ER +
Sbjct: 250 KEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELFGPDGAWKQMFQERSSR 309
Query: 243 MGTAIKDR 250
M A+ +
Sbjct: 310 MLQALSPK 317
>sp|O74975|PCY1_SCHPO Probable choline-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.02c PE=1 SV=3
Length = 362
Score = 246 bits (627), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 147/190 (77%), Gaps = 4/190 (2%)
Query: 15 EPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTD 74
+PP RPVRVYADG++DLFH GH R LEQAKK+FPN +L+VG ND+ TH+ KG TVM D
Sbjct: 95 DPPEGRPVRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMND 154
Query: 75 KERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYA-DATGSGKDVYEFVK 133
KER E+LRHC+WVDEV+ +APWV+T +FL++H+ID+VAHD +PYA D +G D+Y VK
Sbjct: 155 KERAEALRHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDIPYASDDSG---DIYLPVK 211
Query: 134 SIGKFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRLRMNMGL 193
+GKF TKRT+G+STSDLI RI++DY+QYV RNL RG RKEL VS K+ L + +
Sbjct: 212 KVGKFIPTKRTEGVSTSDLITRIIRDYDQYVMRNLARGVNRKELNVSLFKKNELDLRHHI 271
Query: 194 KKLREKVKKH 203
K LR+ ++ H
Sbjct: 272 KVLRDTLRNH 281
>sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A
PE=1 SV=2
Length = 367
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 161/224 (71%), Gaps = 6/224 (2%)
Query: 17 PRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE 76
P +RPVRVYADGI+DLFH GHARAL QAK LFPNTYL+VG +DE TH +KG TVM + E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENE 131
Query: 77 RYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIG 136
RY++++HCR+VDEV+ +APW +T +FL +H+ID+VAHD +PY+ A DVY+ +K G
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSA--GSDDVYKHIKEAG 189
Query: 137 KFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRL----RMNMG 192
F T+RT+GISTSD+I RIV+DY+ Y RNL RGYT KEL VS++ EK+ R++
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 193 LKKLREKVKKHQEKIQIVAKTASMRRNEWVENADRLVAGFLEMF 236
KK+++ +K +E +Q V + + +W E + + FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMF 293
>sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus
GN=Pcyt1a PE=1 SV=2
Length = 367
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 161/224 (71%), Gaps = 6/224 (2%)
Query: 17 PRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE 76
P +RPVRVYADGI+DLFH GHARAL QAK LFPNTYL+VG +DE TH +KG TVM + E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENE 131
Query: 77 RYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIG 136
RY++++HCR+VDEV+ +APW +T +FL +H+ID+VAHD +PY+ A DVY+ +K G
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSA--GSDDVYKHIKEAG 189
Query: 137 KFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRL----RMNMG 192
F T+RT+GISTSD+I RIV+DY+ Y RNL RGYT KEL VS++ EK+ R++
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 193 LKKLREKVKKHQEKIQIVAKTASMRRNEWVENADRLVAGFLEMF 236
KK+++ +K +E +Q V + + +W E + + FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMF 293
>sp|P13259|PCY1_YEAST Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2
Length = 424
Score = 235 bits (600), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 144/197 (73%), Gaps = 2/197 (1%)
Query: 16 PPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDK 75
PP DRP+R+YADG++DLFH GH + LEQ KK FPN L+VG +D+ THK KG TV+TDK
Sbjct: 98 PPTDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDK 157
Query: 76 ERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSI 135
+R E+L HCRWVDEV+P+APW VT +FL +H+IDYVAHD +PY A D+Y+ +K +
Sbjct: 158 QRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPYVSA--DSDDIYKPIKEM 215
Query: 136 GKFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRLRMNMGLKK 195
GKF T+RT+G+STSD+I +I++DY++Y+ RN RG TR+EL VS++K+ L + +
Sbjct: 216 GKFLTTQRTNGVSTSDIITKIIRDYDKYLMRNFARGATRQELNVSWLKKNELEFKKHINE 275
Query: 196 LREKVKKHQEKIQIVAK 212
R KK+Q + ++
Sbjct: 276 FRSYFKKNQTNLNNASR 292
>sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a
PE=1 SV=1
Length = 367
Score = 235 bits (600), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 161/224 (71%), Gaps = 6/224 (2%)
Query: 17 PRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE 76
P +RPVRVYADGI+DLFH GHARAL QAK LFPNTYL+VG +DE TH +KG TVM + E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENE 131
Query: 77 RYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIG 136
RY++++HCR+VDEV+ +APW +T +FL +H+ID+VAHD +PY+ A DVY+ +K G
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSA--GSDDVYKHIKDAG 189
Query: 137 KFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRL----RMNMG 192
F T+RT+GISTSD+I RIV+DY+ Y RNL RGYT KEL VS++ EK+ R++
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 193 LKKLREKVKKHQEKIQIVAKTASMRRNEWVENADRLVAGFLEMF 236
KK+++ +K +E +Q V + + +W E + + FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMF 293
>sp|P49584|PCY1A_CRIGR Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus
GN=PCYT1A PE=2 SV=1
Length = 367
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 159/224 (70%), Gaps = 6/224 (2%)
Query: 17 PRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE 76
P +RPVRVYADGI+DLFH GHARAL QAK LFPNTY +VG +DE TH +KG TVM + E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNENE 131
Query: 77 RYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIG 136
RY++++HCR+VDEV+ +APW +T +FL +H+ID+VAHD +PY+ A DVY+ +K G
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSA--GSDDVYKHIKEAG 189
Query: 137 KFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRL----RMNMG 192
F T+RT+GISTSD+I RIV+DY+ Y RNL RGYT KEL VS++ EK+ R++
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 193 LKKLREKVKKHQEKIQIVAKTASMRRNEWVENADRLVAGFLEMF 236
KK+++ +K +E +Q V + + W E + + FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEERSIDLIQTWEEKSREFIGSFLEMF 293
>sp|P49583|PCY1_CAEEL Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis
elegans GN=F08C6.2 PE=2 SV=2
Length = 362
Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 147/217 (67%), Gaps = 16/217 (7%)
Query: 20 RPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKERYE 79
RPVR+YADGIYDLFH GHA L Q KK+FPN YL+VG D DTHKYKG+TV +++ERY+
Sbjct: 79 RPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYD 138
Query: 80 SLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKFK 139
+RHCR+VDEV +APW T +FL ++D++AHD++PY A G +D+YE + G F
Sbjct: 139 GVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPYV-APGE-EDLYEKFRREGMFL 196
Query: 140 ETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRKELGVSYVKEKRLRMNMGLKKLREK 199
ET+RT+G+STSD++ RI++DY++YV RNL RGY+ KEL V ++ + ++ + L+ K
Sbjct: 197 ETERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKELNVGFLAASKYQIQNKVDSLKSK 256
Query: 200 VKKHQEKIQIVAKTASMRRNEWVENADRLVAGFLEMF 236
I++++ W +D ++ F++ F
Sbjct: 257 ------GIELLST--------WKSKSDDIIRDFIDTF 279
>sp|P49587|PCY1_PLAFK Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum
(isolate K1 / Thailand) GN=CTP PE=2 SV=1
Length = 370
Score = 198 bits (504), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 144/241 (59%), Gaps = 19/241 (7%)
Query: 12 NSAEPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTV 71
N + V +YADG+YD+ H GH + LEQAKKLF NT L+VG +D +T +KG+ V
Sbjct: 82 NKGSIKNSKNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQVV 141
Query: 72 MTDKERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGS------- 124
T +ER E+L+H RWVDE+I PWVVT +FL+K++IDYVAHD +PYA+
Sbjct: 142 QTLEERTETLKHIRWVDEIISPCPWVVTPEFLEKYKIDYVAHDDIPYANNQKKKKKKKSK 201
Query: 125 ---------GKDVYEFVKSIGKFKETKRTDGISTSDLIMRIVKDYNQYVTRNLDRGYTRK 175
+D+Y ++K GKFK T+RT+G+ST+DLI+RI+K+Y Y+ R+L RG
Sbjct: 202 GKSFSFDEENEDIYAWLKRAGKFKATQRTEGVSTTDLIVRILKNYEDYIERSLQRGIHPN 261
Query: 176 ELGVSYVKEKRLRMNMGLKKLREKVKKHQEKIQIVAKTASMRRNEWVENADRLVAGFLEM 235
EL + K + ++M L + EKV K+ + K ++ VEN L F E+
Sbjct: 262 ELNIGVTKAQSIKMKKNLIRWGEKVTDELTKVTLTDKPLGTDFDQGVEN---LQVKFKEL 318
Query: 236 F 236
F
Sbjct: 319 F 319
>sp|Q55BZ4|PCY2_DICDI Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium
discoideum GN=pctA PE=1 SV=1
Length = 360
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 98/149 (65%), Gaps = 7/149 (4%)
Query: 20 RPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKERYE 79
+P+RVY DG +DL HFGHA AL QA++L L+VG + DE+ K KG VM ++ERY+
Sbjct: 8 KPIRVYVDGCFDLMHFGHANALRQAREL--GDILVVGVHTDEEIAKNKGPPVMNEQERYK 65
Query: 80 SLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKFK 139
++R C+W DEV AP+ +T+++LD D+ H A GKDVYE +K GKF+
Sbjct: 66 AVRACKWADEVAEGAPYTLTEEYLDSLNCDFCVHGEDISVGA--DGKDVYEGIKKSGKFR 123
Query: 140 ETKRTDGISTSDLIMRIV---KDYNQYVT 165
KRT+G+ST++L+ R++ KD+ Q V+
Sbjct: 124 FIKRTEGVSTTELVGRMLLCTKDHLQNVS 152
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 6/166 (3%)
Query: 4 RKVVREGTNSAEPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDT 63
RK+V+ + P D+ +Y DG +DLFH GH AL+QA+ L YL+VG ++D
Sbjct: 184 RKIVQFSEGRSPKPNDK--IIYMDGGFDLFHVGHTEALKQARAL--GDYLIVGVHDDRVV 239
Query: 64 HKYKGKT--VMTDKERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADA 121
H+ KG +M ER S+ CR+VDEV+ AP+ VT+D +D I+ V H
Sbjct: 240 HEQKGSNFPIMNLHERVLSVLSCRYVDEVVIGAPFSVTKDMIDSLHINVVVHGDDQVVLG 299
Query: 122 TGSGKDVYEFVKSIGKFKETKRTDGISTSDLIMRIVKDYNQYVTRN 167
G D Y+ + +G +KE K T+G++ ++++ RI+ + QY RN
Sbjct: 300 PEGGVDPYKLPRELGIYKEVKHTEGLTATEIVKRIIDNRLQYEARN 345
>sp|Q922E4|PCY2_MOUSE Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 10/158 (6%)
Query: 6 VVREGTNSAE------PPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNN 59
++R G +A P R VRV+ DG YD+ H+GH+ L QA+ + YL+VG +
Sbjct: 1 MIRNGHGAASAAGLKGPGDQRIVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHT 58
Query: 60 DEDTHKYKGKTVMTDKERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYA 119
DE+ K+KG V T +ERY+ ++ +WVDEV+P AP+V T + LDKH D+ H +
Sbjct: 59 DEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHGN--DI 116
Query: 120 DATGSGKDVYEFVKSIGKFKETKRTDGISTSDLIMRIV 157
T G+D YE VK G+++E KRT G+ST+DL+ R++
Sbjct: 117 TLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRML 154
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 13 SAEPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKT-- 70
S + P+ +Y G +DLFH GH L++ KL Y++ G + D++ ++YKGK
Sbjct: 223 SGKEPQPGETVIYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYP 282
Query: 71 VMTDKERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAH---DSLPYADATGSGKD 127
+M ER S+ CR+V EV+ AP+ VT + L+ ++D V H + +P D G D
Sbjct: 283 IMNLHERTLSVLACRYVSEVVIGAPYSVTAELLNHFKVDLVCHGKTEIVPDRD----GSD 338
Query: 128 VYEFVKSIGKFKETKRTDGISTSDLIMRIVKDYNQYVTRN 167
Y+ K G F + ++T ++ RI+K+ +Y RN
Sbjct: 339 PYQEPKRRGIFYQIDSGSDLTTDLIVQRIIKNRLEYEARN 378
>sp|O88637|PCY2_RAT Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 91/138 (65%), Gaps = 4/138 (2%)
Query: 20 RPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKERYE 79
R VRV+ DG YD+ H+GH+ L QA+ + YL+VG + DE+ K+KG V T +ERY+
Sbjct: 21 RTVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 80 SLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKFK 139
++ +WVDEV+P AP+V T + LDKH D+ H + T G+D YE VK G+++
Sbjct: 79 MVQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHGN--DITLTVDGRDTYEEVKQAGRYR 136
Query: 140 ETKRTDGISTSDLIMRIV 157
E KRT G+ST+DL+ R++
Sbjct: 137 ECKRTQGVSTTDLVGRML 154
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 13 SAEPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKT-- 70
S + P+ +Y G +DLFH GH L++ KL Y++ G + D++ ++YKGK
Sbjct: 223 SGKEPQPGETVIYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYP 282
Query: 71 VMTDKERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAH---DSLPYADATGSGKD 127
+M ER S+ CR+V EV+ AP+ VT + L+ ++D V H + +P D G D
Sbjct: 283 IMNLHERTLSVLACRYVSEVVIGAPYSVTAELLNHFKVDLVCHGKTEIVPDRD----GSD 338
Query: 128 VYEFVKSIGKFKETKRTDGISTSDLIMRIVKDYNQYVTRN 167
YE K G F + ++T ++ RI+K+ +Y RN
Sbjct: 339 PYEEPKRRGIFCQIDSGSDLTTDLIVQRIIKNRLEYEARN 378
>sp|Q99447|PCY2_HUMAN Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens
GN=PCYT2 PE=1 SV=1
Length = 389
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 93/148 (62%), Gaps = 4/148 (2%)
Query: 10 GTNSAEPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGK 69
G P R VRV+ DG YD+ H+GH+ L QA+ + YL+VG + DE+ K+KG
Sbjct: 11 GAEQPGPGGRRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGP 68
Query: 70 TVMTDKERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVY 129
V T +ERY+ ++ +WVDEV+P AP+V T + LDK+ D+ H + T G+D Y
Sbjct: 69 PVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGN--DITLTVDGRDTY 126
Query: 130 EFVKSIGKFKETKRTDGISTSDLIMRIV 157
E VK G+++E KRT G+ST+DL+ R++
Sbjct: 127 EEVKQAGRYRECKRTQGVSTTDLVGRML 154
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 13 SAEPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKT-- 70
S + P+ +Y G +DLFH GH LE+ +L Y++ G + D++ + YKGK
Sbjct: 205 SGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYP 264
Query: 71 VMTDKERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAH---DSLPYADATGSGKD 127
+M ER S+ CR+V EV+ AP+ VT + L ++D V H + +P D G D
Sbjct: 265 IMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEIIPDRD----GSD 320
Query: 128 VYEFVKSIGKFKETKRTDGISTSDLIMRIVKDYNQYVTRN 167
Y+ K G F++ ++T ++ RI+ + +Y RN
Sbjct: 321 PYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEYEARN 360
>sp|Q5EA75|PCY2_BOVIN Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2
PE=2 SV=1
Length = 389
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 93/148 (62%), Gaps = 4/148 (2%)
Query: 10 GTNSAEPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGK 69
G P R VRV+ DG YD+ H+GH+ L QA+ + +L+VG + DE+ K+KG
Sbjct: 11 GAKRPGPRARRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDHLIVGVHTDEEIAKHKGP 68
Query: 70 TVMTDKERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVY 129
V T +ERY+ ++ +WVDEV+P AP+V T + LDK+ D+ H + T G+D Y
Sbjct: 69 PVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGN--DITLTVDGRDTY 126
Query: 130 EFVKSIGKFKETKRTDGISTSDLIMRIV 157
E VK G+++E KRT G+ST+DL+ R++
Sbjct: 127 EEVKQAGRYRECKRTQGVSTTDLVGRML 154
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
Query: 13 SAEPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKT-- 70
S + P+ +Y G +DLFH GH LE+ L Y++ G + D++ + YKGK
Sbjct: 205 SGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAGLHFDQEVNHYKGKNYP 264
Query: 71 VMTDKERYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAH---DSLPYADATGSGKD 127
+M ER S+ CR+V EV+ AP+ VT + LD ++D V H + +P D G D
Sbjct: 265 IMNLHERTLSVLACRYVSEVVIGAPYSVTAELLDHFKVDLVCHGKTEVVPDKD----GSD 320
Query: 128 VYEFVKSIGKFKETKRTDGISTSDLIMRIVKDYNQYVTRN 167
YE K G F + + ++T ++ RI+K+ +Y RN
Sbjct: 321 PYEEPKRRGIFCQVDSGNDLTTDLIVQRIIKNRLEYEARN 360
>sp|P33412|ECT1_YEAST Ethanolamine-phosphate cytidylyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECT1 PE=1
SV=1
Length = 323
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Query: 21 PVRVYADGIYDLFHFGHARALEQAKKLFP--NTYLLVGCNNDEDTHKYKGKTVMTDKERY 78
P +V+ DG +D H GHA A+ QA++ N L G + DED KG VM ERY
Sbjct: 7 PDKVWIDGCFDFTHHGHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGTPVMNSSERY 66
Query: 79 ESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKF 138
E R RW EV+ AP+V +++DK+Q YV H DA +G+D Y+ VK +G+F
Sbjct: 67 EHTRSNRWCSEVVEAAPYVTDPNWMDKYQCQYVVHGDDITIDA--NGEDCYKLVKEMGRF 124
Query: 139 KETKRTDGISTSDLIMRIV 157
K KRT G+ST+++I RI+
Sbjct: 125 KVVKRTYGVSTTEIIHRIL 143
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 24 VYADGIYDLFHFGHARALEQAKK-LFPNTYLLVGCNNDEDTHKYKGKTVMTDKERYESLR 82
VY DG +DLFH G L + K L P+ L+VG + T+MT KER S+
Sbjct: 200 VYVDGDFDLFHMGDIDQLRKLKMDLHPDKKLIVGITTSD-----YSSTIMTMKERVLSVL 254
Query: 83 HCRWVDEVIPDA 94
C++VD VI DA
Sbjct: 255 SCKYVDAVIIDA 266
>sp|Q8SQW6|ECT1_ENCCU Probable ethanolamine-phosphate cytidylyltransferase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1
SV=1
Length = 322
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 4/135 (2%)
Query: 23 RVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKERYESLR 82
+V+ADG +D+FH+GHA AL Q+K L YL+ G ++ ++ KG VM D+ERYE +
Sbjct: 8 KVWADGCFDMFHYGHANALRQSKAL--GDYLIAGVHSSLSINQEKGLPVMEDEERYEVVE 65
Query: 83 HCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKFKETK 142
CR+VDEV+ DAP+V + ++ + VAH + D+ SG+D Y V+ +G F+E +
Sbjct: 66 GCRYVDEVVRDAPFVTQTSMIKEYGVSIVAHGNDIVLDS--SGQDSYCQVRRMGIFREVE 123
Query: 143 RTDGISTSDLIMRIV 157
RT GIST++++ R++
Sbjct: 124 RTFGISTTEIVGRMM 138
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 15/151 (9%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKY-KGKTVMTDKERYESLR 82
V+ DG +DLFH GH +L A+ + YL+VG ++DE T +Y + V++ KER +L
Sbjct: 180 VFMDGNFDLFHAGHVASLRIARGM--GDYLIVGIHDDETTKEYTRSYPVLSTKERMLTLM 237
Query: 83 HCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDV--YEFVKSIGKFKE 140
CR+VDE++ +P++V +F+ +H ID VA P D+ KD+ Y+ +K + +
Sbjct: 238 ACRYVDEIVV-SPYLVGSEFIKRHGIDVVA----PSFDS----KDLSRYDGIKDVVEHSY 288
Query: 141 TK-RTDGISTSDLIMRIVKDYNQYVTRNLDR 170
+ R + +S ++ RI+ +Y Y R R
Sbjct: 289 AENRFNYLSAEHIVNRIISNYQDYANRQKKR 319
>sp|Q9UTI6|ECT1_SCHPO Probable ethanolamine-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC15E1.05c PE=2 SV=1
Length = 365
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 85/136 (62%), Gaps = 4/136 (2%)
Query: 23 RVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKERYESLR 82
R++ DG D FH+GH+ A+ QAK+L L++G ++DE+ KG VMT +ER S
Sbjct: 10 RLWLDGCMDFFHYGHSNAILQAKQL--GETLVIGIHSDEEITLNKGPPVMTLEERCLSAN 67
Query: 83 HCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKFKETK 142
C+WVDEV+P AP+V +++ ++ YV H DA +G D Y F K+ ++ E K
Sbjct: 68 TCKWVDEVVPSAPYVFDLEWMRRYGCQYVVHGDDISTDA--NGDDCYRFAKAADQYLEVK 125
Query: 143 RTDGISTSDLIMRIVK 158
RT+G+ST++L+ R++
Sbjct: 126 RTEGVSTTELLDRLLS 141
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKERYESLRH 83
+Y DG +DLF H ALE ++FP ++ G DE + K ++ ER +L
Sbjct: 205 IYIDGDWDLFTEKHISALELCTRMFPGIPIMAGIFADEKCFE---KPMLNLLERILNLLQ 261
Query: 84 CRWVDEVIPDAP 95
C+++ ++ P
Sbjct: 262 CKYISSILVGPP 273
>sp|Q8RKI6|TARD_BACPZ Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis
subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 /
W23) GN=tarD PE=3 SV=1
Length = 129
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 23 RVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKERYESLR 82
+V G +DLFH+GH + LE+AK L YL+VG + DE + + K+ + + R L
Sbjct: 3 KVITYGTFDLFHYGHMKLLERAKNL--GDYLIVGLSTDEFNLQKQKKSHHSYEHRKFILE 60
Query: 83 HCRWVDEVIPDAPWVVTQDFLDKHQID-YVAHDSLPYADATGSGKDVYEFVKSIGKFKET 141
V+EVIP+ W + KH ID +V D D G ++F+K +
Sbjct: 61 TIDLVNEVIPEKNWEQKISDIQKHDIDTFVIGD-----DWKGK----FDFLKEYCEVIYL 111
Query: 142 KRTDGISTSDL 152
RTDGIST+ +
Sbjct: 112 PRTDGISTTQI 122
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3 SV=1
Length = 148
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 19 DRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE-R 77
DR +RV G++D+ H GH L+ AK+L L+V +DE K KG+ + E R
Sbjct: 4 DRKIRVVVGGVFDIIHAGHVHFLKMAKEL--GDELIVIVAHDETVKKRKGRPPINPAEDR 61
Query: 78 YESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGK 137
E L+ R+VD+V+ P ++ D + + + D +A D +D+ +KSIG
Sbjct: 62 AEVLKAIRYVDDVVIGKPGEISLDLIKRLKPDVIALGP----DQDFDCEDLKRKLKSIGL 117
Query: 138 FKETKRT------DGISTSDLIMRIVKDY 160
E R D TS +I RI + +
Sbjct: 118 NVEVIRLPYLYKKDRAKTSKIIERITEIF 146
>sp|Q3A526|HLDE_PELCD Bifunctional protein HldE OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=hldE PE=3 SV=1
Length = 490
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKT--VMTDKERYESL 81
V+ +G +DL H GH + L++A++L L++G N+D + KG + +++++ER L
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKARRL--GDLLVLGLNSDASIRRLKGPSRPLISEQERAHIL 412
Query: 82 RHCRWVDEVI---PDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKF 138
+D V+ D P + +D + D + Y T GKD+ E G+
Sbjct: 413 AALSCIDYVVVFDEDTPL----ELIDTLRPDILVKGG-DYTPETVVGKDLVESYG--GRV 465
Query: 139 KETKRTDGISTSDLIMRIVKDYNQ 162
+ DG ST+++I RI+ Y Q
Sbjct: 466 ELIDLVDGRSTTNIIERILDRYEQ 489
>sp|P27623|TAGD_BACSU Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis
(strain 168) GN=tagD PE=1 SV=1
Length = 129
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 23 RVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKERYESLR 82
+V G +DL H+GH + LE+AK+L YL+V + DE + + K + + R L
Sbjct: 3 KVITYGTFDLLHWGHIKLLERAKQL--GDYLVVAISTDEFNLQKQKKAYHSYEHRKLILE 60
Query: 83 HCRWVDEVIPDAPW-VVTQDFLDKHQID-YVAHDSLPYADATGSGKDVYEFVKSIGKFKE 140
R+VDEVIP+ W QD +D H ID +V D D G ++F+K +
Sbjct: 61 TIRYVDEVIPEKNWEQKKQDIID-HNIDVFVMGD-----DWEGK----FDFLKDQCEVVY 110
Query: 141 TKRTDGISTSDL 152
RT+GIST+ +
Sbjct: 111 LPRTEGISTTKI 122
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3
SV=1
Length = 148
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 19 DRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE-R 77
+R +RV G++D+ H GH L+ AK+L L+V +DE K KG+ + E R
Sbjct: 4 NRRIRVVVGGVFDILHVGHIHFLKMAKEL--GDELIVIVAHDETVKKRKGRPPINPAEDR 61
Query: 78 YESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGK 137
E LR R+VD+V+ P ++ + + K + D +A D + + E ++SIG
Sbjct: 62 AEVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGP----DQDFDCRTLKEKLRSIGL 117
Query: 138 FKETKRT------DGISTSDLIMRIVKDY 160
E R D TS +I RI + +
Sbjct: 118 KVEVIRLPYLYKEDRAKTSKIIKRITEIF 146
>sp|C5A1S7|RIBL_THEGJ FAD synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM
11827 / EJ3) GN=ribL PE=3 SV=1
Length = 151
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 16 PPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDK 75
P + R +RV G++D+ H GH L+QAK+L L+V +DE + K + +
Sbjct: 4 PSKGRKIRVLVGGVFDILHVGHVHFLKQAKEL--GDELVVIVAHDETVRRNKRRNPINPA 61
Query: 76 E-RYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKS 134
E R E LR R+VDEV +P + + + + D +A D + + + E +K
Sbjct: 62 EDRAELLRAIRYVDEVYIGSPGGIDFELVRRINPDVIAIGP----DQNFNCEKLKEELKR 117
Query: 135 IGKFKETKR------TDGISTSDLIMRIVKDY 160
G E R +D T+ +I RIV+++
Sbjct: 118 HGIEAEVIRVPYLYKSDRAKTTKIIRRIVEEF 149
>sp|B6YXC8|RIBL_THEON FAD synthase OS=Thermococcus onnurineus (strain NA1) GN=ribL PE=3
SV=1
Length = 150
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 22 VRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE-RYES 80
+RV A G++DL H GH L QAK L L+V +DE K + + E R E
Sbjct: 9 IRVLAGGVFDLLHVGHIHFLSQAKSL--GDELVVIVAHDETVRMQKRREPVNPAEDRAEL 66
Query: 81 LRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKFKE 140
LR + VDEV +P + + + K D VA D S + + E ++ G E
Sbjct: 67 LRALKMVDEVYIGSPGTIDYELVRKINPDIVAIGP----DQRFSCERLKEELRKHGINSE 122
Query: 141 TKRT------DGISTSDLIMRIVKDYNQ 162
R D TS +I RIV+ Y +
Sbjct: 123 VIRIPYLYKEDRAKTSKIIQRIVETYCE 150
>sp|B1JM26|HLDE_YERPY Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=hldE PE=3 SV=1
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY H+ + +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|Q665V3|HLDE_YERPS Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=hldE PE=3 SV=1
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY H+ + +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|B2K2H4|HLDE_YERPB Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype
IB (strain PB1/+) GN=hldE PE=3 SV=1
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY H+ + +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|A7FE79|HLDE_YERP3 Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=hldE PE=3 SV=1
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY H+ + +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|A4THT9|HLDE_YERPP Bifunctional protein HldE OS=Yersinia pestis (strain Pestoides F)
GN=hldE PE=3 SV=1
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY H+ + +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|Q1CMD4|HLDE_YERPN Bifunctional protein HldE OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=hldE PE=3 SV=1
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY H+ + +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|A9R7D5|HLDE_YERPG Bifunctional protein HldE OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=hldE PE=3 SV=1
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY H+ + +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|Q8ZI60|HLDE_YERPE Bifunctional protein HldE OS=Yersinia pestis GN=hldE PE=3 SV=1
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY H+ + +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|Q1C374|HLDE_YERPA Bifunctional protein HldE OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=hldE PE=3 SV=1
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V ++R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY H+ + +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|Q83B60|HLDE_COXBU Bifunctional protein HldE OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=hldE PE=3 SV=1
Length = 475
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGK--TVMTDKERYESL 81
V +G +D+ H GH LE AK + L+V N+D + KGK + + + R E L
Sbjct: 345 VMTNGCFDILHAGHVHYLEAAKAM--GHRLIVAVNDDNSVRRLKGKDRPINSLQARMEVL 402
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKF 138
R +D V+P D P + + L I D P A G E VK+ GK
Sbjct: 403 TALRAIDWVVPFSEDTPARLITEVLP--NILVKGGDYQPSQIAGGD-----EVVKNGGKV 455
Query: 139 KETKRTDGISTSDLIMRIV 157
+G STS L+ +++
Sbjct: 456 LTIPIKEGFSTSRLVEKML 474
>sp|A9N9S2|HLDE_COXBR Bifunctional protein HldE OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=hldE PE=3 SV=1
Length = 475
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGK--TVMTDKERYESL 81
V +G +D+ H GH LE AK + L+V N+D + KGK + + + R E L
Sbjct: 345 VMTNGCFDILHAGHVHYLEAAKAM--GHRLIVAVNDDNSVRRLKGKDRPINSLQARMEVL 402
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKF 138
R +D V+P D P + + L I D P A G E VK+ GK
Sbjct: 403 TALRAIDWVVPFSEDTPARLITEVLP--NILVKGGDYQPSQIAGGD-----EVVKNGGKV 455
Query: 139 KETKRTDGISTSDLIMRIV 157
+G STS L+ +++
Sbjct: 456 LTIPIKEGFSTSRLVEKML 474
>sp|A9KDJ2|HLDE_COXBN Bifunctional protein HldE OS=Coxiella burnetii (strain Dugway
5J108-111) GN=hldE PE=3 SV=1
Length = 475
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGK--TVMTDKERYESL 81
V +G +D+ H GH LE AK + L+V N+D + KGK + + + R E L
Sbjct: 345 VMTNGCFDILHAGHVHYLEAAKAM--GHRLIVAVNDDNSVRRLKGKDRPINSLQARMEVL 402
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKF 138
R +D V+P D P + + L I D P A G E VK+ GK
Sbjct: 403 TALRAIDWVVPFSEDTPARLITEVLP--NILVKGGDYQPSQIAGGD-----EVVKNGGKV 455
Query: 139 KETKRTDGISTSDLIMRIV 157
+G STS L+ +++
Sbjct: 456 LTIPIKEGFSTSRLVEKML 474
>sp|A8GJU3|HLDE_SERP5 Bifunctional protein HldE OS=Serratia proteamaculans (strain 568)
GN=hldE PE=3 SV=1
Length = 476
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 21/144 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKT--VMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG+T V + R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGETRPVNALENRMIVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY D + +G DV
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPEDIAGSTEVWANGGDV------- 453
Query: 136 GKFKETKRTDGISTSDLIMRIVKD 159
K DG+ST+++I + +KD
Sbjct: 454 ---KVLNFEDGLSTTNII-KAIKD 473
>sp|A0KPL4|HLDE_AERHH Bifunctional protein HldE OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=hldE PE=3 SV=1
Length = 475
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYK--GKTVMTDKERYESL 81
V +G +D+ H GH L A KL L+V N DE + K G+ V + R L
Sbjct: 343 VMTNGCFDILHAGHVSYLANAGKL--GDRLIVAVNTDESVRRLKGPGRPVNPTERRMAVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + + L + DY + YA+ T +G
Sbjct: 401 AALGAVDWVVPFAEDTPQRLIAEVLPDLLVKGGDYKPEEIAGYAEVTANG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ + DG STSD+I I
Sbjct: 451 GEVRVLNFEDGCSTSDIIKTI 471
>sp|B0TTF2|HLDE_SHEHH Bifunctional protein HldE OS=Shewanella halifaxensis (strain
HAW-EB4) GN=hldE PE=3 SV=1
Length = 476
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 20/144 (13%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYK--GKTVMTDKERYESL 81
V +G +D+ H GH L+QA+ L L+V N D + K G+ V T+ R L
Sbjct: 344 VMTNGCFDILHAGHVSYLQQARAL--GDRLIVAVNTDASVKRLKGEGRPVNTEDRRMTVL 401
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + L + DY D A+ +G
Sbjct: 402 AALASVDWVVPFTEDTPQRIISRLLPDLLVKGGDYKVEDIAGGAEVMAAG---------- 451
Query: 136 GKFKETKRTDGISTSDLIMRIVKD 159
G+ K DGIST+ +I I+ +
Sbjct: 452 GQVKVLGFEDGISTTAIIQNIMAN 475
>sp|Q5JHT4|RIBL_PYRKO FAD synthase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=ribL PE=3 SV=1
Length = 149
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 22 VRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDKE-RYES 80
+RV G++D+ H GH L+QAK+L L+V +DE K + + E R E
Sbjct: 8 IRVLVGGVFDILHVGHIHFLKQAKEL--GDELVVIVAHDETVRMQKRREPINPAEDRAEL 65
Query: 81 LRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFVKSIGKFKE 140
LR R+VDEV P + + + + D +A D + + + E ++ G E
Sbjct: 66 LRAIRYVDEVYIGTPGTIDMELVKRIDPDVIAIGP----DQFFNCEKLKEELRKHGINAE 121
Query: 141 TKR------TDGISTSDLIMRIVKDYNQ 162
R +D TS +I RIV+ + +
Sbjct: 122 VIRIPYLYKSDRAKTSKIIQRIVETFCE 149
>sp|A0RQR9|HLDE_CAMFF Bifunctional protein HldE OS=Campylobacter fetus subsp. fetus
(strain 82-40) GN=hldE PE=3 SV=1
Length = 458
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 18/144 (12%)
Query: 18 RDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDK 75
R V+ +G +D+ HFGH L+ AKK+ L+VG N+D + KG + V
Sbjct: 326 RSGKTMVFTNGCFDILHFGHISYLQSAKKI--GDMLVVGLNSDRSVKELKGDNRPVNAQS 383
Query: 76 ERYESLRHCRWVDEVI---PDAPWVVTQDFLDKHQIDYVAHDSLPYADATGSGKDVYEFV 132
+R L +VD V+ D P + + + D + AD TG EFV
Sbjct: 384 DRASMLAALEFVDFVVIFDEDTPL----NLIKTLKPDILVKG----ADYTGKKVVGSEFV 435
Query: 133 KSIGKFKETKRTDGISTSDLIMRI 156
+ + K DG ST+++I +I
Sbjct: 436 REV---KLIDFVDGKSTTNIINKI 456
>sp|Q39X60|HLDE_GEOMG Bifunctional protein HldE OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=hldE PE=3 SV=1
Length = 490
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 10 GTNSAEPPRDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG- 68
G AE R + + V+ +G +DL H GH + L++AK L++G N+D + KG
Sbjct: 342 GIIEAEKARGKKI-VFTNGCFDLLHVGHVKYLQKAKSY--GDVLVLGLNSDASVRRLKGE 398
Query: 69 -KTVMTDKERYESLRHCRWVDEVI---PDAPWVVTQDFLDKHQIDYVAHDSLPYADATGS 124
+ ++ + ER L +D V+ D P + + K + D P
Sbjct: 399 KRPLIDEAERAHILAALDCIDYVVIFDEDTPLRLIETL--KPAVLVKGGDYTPEGVV--- 453
Query: 125 GKDVYEFVKSIGKFKETKRTDGISTSDLIMRIVKDYNQ 162
GKDV E G+ + DG ST+++I +I++ Y +
Sbjct: 454 GKDVVESYG--GRVELVTFVDGRSTTNIIDKILRAYGE 489
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597)
GN=ribL PE=3 SV=1
Length = 148
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 18 RDRPVRVYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKTVMTDK-E 76
+ + +RV G++D+ H GH L+QAK+L L+V +D+ + KG+ + E
Sbjct: 3 KKKKIRVVTGGVFDILHVGHIHFLKQAKEL--GDELVVIVAHDKTVEERKGRRPINSMYE 60
Query: 77 RYESLRHCRWVDEVIPDAPWVVTQDFLDKHQIDYVA 112
R E L+ + VDEV+ P ++ + + + D +A
Sbjct: 61 RAEVLKALKMVDEVVIGEPNCISFEIVKQLNPDIIA 96
>sp|A1TYR4|HLDE_MARAV Bifunctional protein HldE OS=Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8) GN=hldE PE=3 SV=1
Length = 481
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V+ +G +D+ H GH R L QA+ L L+VG N+D + KG + V + ++R E L
Sbjct: 346 VFTNGCFDILHAGHVRYLAQARAL--GDRLVVGLNSDASVRRLKGEERPVNSLEDRMEVL 403
Query: 82 RHCRWVDEVIP 92
VD VIP
Sbjct: 404 SALACVDWVIP 414
>sp|A7MP93|HLDE_CROS8 Bifunctional protein HldE OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=hldE PE=3 SV=1
Length = 475
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKT--VMTDKERYESL 81
V +G++D+ H GH L A+KL L+V N+D T + KG T V ++R L
Sbjct: 343 VMTNGVFDILHAGHVSYLANARKL--GDRLIVAVNSDASTRRLKGDTRPVNPQEQRMIVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + + L + DY D + +G DV
Sbjct: 401 AALEAVDWVVPFEEDTPQRLISEILPDLLVKGGDYKPEDIAGSKEVWANGGDVMVL---- 456
Query: 136 GKFKETKRTDGISTSDLIMRIVKD 159
F+ DG ST+++I +I K+
Sbjct: 457 -NFE-----DGCSTTNIIKKIQKN 474
>sp|A1JQV6|HLDE_YERE8 Bifunctional protein HldE OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=hldE PE=3 SV=1
Length = 476
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKG--KTVMTDKERYESL 81
V +GI+D+ H GH L A+KL L+V N+D T + KG + V +R L
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGEKRPVNPLDQRMIVL 400
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + D L + DY + A+ +G
Sbjct: 401 GALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPDEIAGSAEVWAAG---------- 450
Query: 136 GKFKETKRTDGISTSDLIMRI 156
G+ K DG+ST+++I I
Sbjct: 451 GEVKVLNFEDGVSTTNIIQSI 471
>sp|A8H086|HLDE_SHEPA Bifunctional protein HldE OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=hldE PE=3 SV=2
Length = 476
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYK--GKTVMTDKERYESL 81
V +G +D+ H GH L+QA+ L L+V N D + K G+ V ++ R L
Sbjct: 344 VMTNGCFDILHAGHVSYLQQARAL--GDRLIVAVNTDASVKRLKGEGRPVNSEDRRMTVL 401
Query: 82 RHCRWVDEVIP---DAPWVVTQDFLDKHQI---DYVAHDSLPYADATGSGKDVYEFVKSI 135
VD V+P D P + L + DY D A GS E + +
Sbjct: 402 AALASVDWVVPFSEDTPQRIISRLLPDLLVKGGDYKVEDI-----AGGS-----EVMAAG 451
Query: 136 GKFKETKRTDGISTSDLIMRIVKD 159
G+ K DGIST+ +I I+ +
Sbjct: 452 GQVKVLGFEDGISTTAIIQNIMAN 475
>sp|A7H2L7|HLDE_CAMJD Bifunctional protein HldE OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=hldE PE=3
SV=1
Length = 461
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 24 VYADGIYDLFHFGHARALEQAKKLFPNTYLLVGCNNDEDTHKYKGKT--VMTDKERYESL 81
V+ +G +D+ HFGH + LE+AK+L L+VG N+D K KG++ V ++ +R L
Sbjct: 333 VFTNGCFDIVHFGHIKYLEKAKRL--GDVLIVGLNSDASVKKLKGESRPVNSEFQRACML 390
Query: 82 RHCRWVDEVI 91
+VD V+
Sbjct: 391 AAFYFVDFVV 400
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,186,877
Number of Sequences: 539616
Number of extensions: 4895551
Number of successful extensions: 18799
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 18560
Number of HSP's gapped (non-prelim): 335
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)