Your job contains 1 sequence.
>023137
MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHH
VLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSN
ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLW
LLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVI
YEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023137
(287 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 570 1.8e-72 2
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote... 584 9.6e-57 1
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 576 6.8e-56 1
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 574 1.1e-55 1
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi... 336 1.8e-46 2
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 327 9.4e-40 2
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species... 294 5.2e-26 1
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species... 292 8.4e-26 1
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 236 7.2e-20 1
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3... 191 6.4e-19 2
TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar... 213 2.0e-17 1
UNIPROTKB|Q08D83 - symbol:RTN3 "Reticulon-3" species:9913... 108 3.9e-07 2
UNIPROTKB|J9P9U4 - symbol:J9P9U4 "Uncharacterized protein... 108 4.5e-07 2
UNIPROTKB|D4A1U2 - symbol:Rtn3 "Reticulon 3, isoform CRA_... 104 9.7e-07 2
ZFIN|ZDB-GENE-030710-3 - symbol:rtn1b "reticulon 1b" spec... 106 2.3e-06 2
UNIPROTKB|E1BUW7 - symbol:Gga.4205 "Uncharacterized prote... 114 4.2e-06 2
UNIPROTKB|Q7YRW9 - symbol:RTN4 "Uncharacterized protein" ... 97 1.7e-05 2
UNIPROTKB|Q6IM70 - symbol:RTN4 "RTN4-C" species:9823 "Sus... 97 1.7e-05 2
UNIPROTKB|F1NCK0 - symbol:Gga.4205 "Uncharacterized prote... 100 1.8e-05 2
ZFIN|ZDB-GENE-030710-2 - symbol:rtn4b "reticulon 4b" spec... 115 2.1e-05 2
UNIPROTKB|A8MT72 - symbol:RTN1 "Reticulon-1" species:9606... 118 2.4e-05 1
UNIPROTKB|F1PVP5 - symbol:F1PVP5 "Uncharacterized protein... 106 2.4e-05 2
ZFIN|ZDB-GENE-030710-5 - symbol:rtn3 "reticulon 3" specie... 97 3.1e-05 2
UNIPROTKB|F1PNX5 - symbol:RTN1 "Uncharacterized protein" ... 118 3.5e-05 1
UNIPROTKB|Q1LZ76 - symbol:RTN1 "Uncharacterized protein" ... 117 4.6e-05 1
RGD|620988 - symbol:Rtn3 "reticulon 3" species:10116 "Rat... 103 5.2e-05 2
UNIPROTKB|I3LBH0 - symbol:RTN1 "Uncharacterized protein" ... 116 6.0e-05 1
UNIPROTKB|F1P5B2 - symbol:Gga.4205 "Uncharacterized prote... 103 8.0e-05 2
UNIPROTKB|H7C106 - symbol:RTN4 "Reticulon-4" species:9606... 95 0.00011 2
UNIPROTKB|F1P5B1 - symbol:Gga.4205 "Uncharacterized prote... 101 0.00012 2
UNIPROTKB|E1BP30 - symbol:E1BP30 "Uncharacterized protein... 121 0.00018 1
UNIPROTKB|I3L6J1 - symbol:RTN1 "Uncharacterized protein" ... 120 0.00026 1
UNIPROTKB|Q16799 - symbol:RTN1 "Reticulon-1" species:9606... 120 0.00027 1
UNIPROTKB|F1Q2B3 - symbol:RTN1 "Uncharacterized protein" ... 119 0.00031 1
UNIPROTKB|F8W914 - symbol:RTN4 "Reticulon-4" species:9606... 94 0.00035 2
UNIPROTKB|F1Q231 - symbol:RTN1 "Uncharacterized protein" ... 118 0.00040 1
UNIPROTKB|Q1RMR8 - symbol:RTN4 "RTN4 protein" species:991... 94 0.00046 2
RGD|620986 - symbol:Rtn1 "reticulon 1" species:10116 "Rat... 115 0.00097 1
MGI|MGI:1933947 - symbol:Rtn1 "reticulon 1" species:10090... 115 0.00098 1
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 570 (205.7 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 104/155 (67%), Positives = 132/155 (85%)
Query: 43 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLIT 102
+ KSKV+RLFGRE+P+H VLG GKPADIF+W++KK+S GV GGAT WVLFEL+EYHL+T
Sbjct: 61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120
Query: 103 LVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLRE 162
L+CH+ I++LAVLFLWSNA+ FI+KSPP+IP V +PE+ +L+ AS LR EINR ++ LRE
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180
Query: 163 IASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYI 197
IASGRD+KKFL IAGLW+LSI+G +F+TL YI
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYI 215
Score = 181 (68.8 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 212 WIVFLLK-CLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
W++ +L C L ++ VLL TVP+ Y+KYEDK+DS+GEKA E+KKQYAV D KV
Sbjct: 198 WVLSILGGCYSFLTLAY-IALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKV 256
Query: 271 LKKVLSRIPKGALK--KKD 287
S+IP+G LK KKD
Sbjct: 257 F----SKIPRGPLKDKKKD 271
>TAIR|locus:2128494 [details] [associations]
symbol:BTI1 "VIRB2-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0071458 "integral to
cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
Uniprot:Q9SUR3
Length = 275
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 109/155 (70%), Positives = 132/155 (85%)
Query: 43 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLIT 102
+ KSKV+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+T
Sbjct: 65 SMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLT 124
Query: 103 LVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLRE 162
L+CH+ I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR + LRE
Sbjct: 125 LLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLRE 184
Query: 163 IASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYI 197
IASGRDLKKFL IAGLW+LSI+G NF+TL YI
Sbjct: 185 IASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYI 219
Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 44/90 (48%), Positives = 57/90 (63%)
Query: 198 GKKHSLVLMAYFLKWIVFLLK-CLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKAT 256
G+ L+A W++ +L C + L ++ VLL TVP+ Y+KYEDK+D GEKA
Sbjct: 188 GRDLKKFLIAIAGLWVLSILGGCFNFLTLAY-IALVLLFTVPLAYDKYEDKVDPLGEKAM 246
Query: 257 IEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
IE+KKQYAV DEKVL S+IP G LK K
Sbjct: 247 IELKKQYAVLDEKVL----SKIPLGPLKNK 272
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 112/197 (56%), Positives = 135/197 (68%)
Query: 1 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXX-XXXXXXXAFKSKVFRLFGREKPIH 59
M E ES + +VEKI +FKSK++RLFGREKP+H
Sbjct: 1 MVEDHKHEESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG GKPADIFLWRNKK+S GVLG TA WVLFEL EYHL+ +CH +I +LA LFLWS
Sbjct: 61 KVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWS 120
Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
NA TFI+KS P IP V +PE +L+ S LR EINR L +LR IASG+D+KKF+ VIAGL
Sbjct: 121 NACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGL 180
Query: 180 WLLSIVGNWCNFVTLFY 196
W+LSI+G+ NF+TLFY
Sbjct: 181 WVLSIIGSCYNFLTLFY 197
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 52/91 (57%), Positives = 67/91 (73%)
Query: 199 KKHSLVLMAYFLKWIVFLL-KCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATI 257
KK LV+ W++ ++ C + L F T VLL T+PV+YEKYEDK+D++GEKA
Sbjct: 171 KKFILVIAGL---WVLSIIGSCYNFLT-LFYTATVLLFTIPVLYEKYEDKVDAYGEKAMR 226
Query: 258 EIKKQYAVFDEKVLKKVLSRIPKGAL-KKKD 287
EIKKQYAV DEKVL+KV+S+IP+GAL KKKD
Sbjct: 227 EIKKQYAVLDEKVLRKVISKIPRGALNKKKD 257
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 109/198 (55%), Positives = 143/198 (72%)
Query: 1 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXX-XAFKSKVFRLFGREKPIH 59
MAE + +++SL+EKI+ A K+K++R+FGREKP+H
Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG GKPAD+FLWR+KK+S VLG ATA+WVLFEL+EYHL++L+CHISIL+L LFLWS
Sbjct: 61 KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120
Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
NA T INK+ P+IP + +PE+ L AS+LR E+N+A +LR IA GRDLKKFL V+ GL
Sbjct: 121 NAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGL 180
Query: 180 WLLSIVGNWCNFVTLFYI 197
W++S+VGNW NF+TL YI
Sbjct: 181 WIISVVGNWFNFLTLVYI 198
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 42/94 (44%), Positives = 57/94 (60%)
Query: 197 IGKKHSLVLMAYFLKWIVFLL----KCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFG 252
+G+ LM WI+ ++ L L+Y FV+LHTVP++YEK+EDK+D
Sbjct: 166 LGRDLKKFLMVVVGLWIISVVGNWFNFLTLVY----ICFVILHTVPMLYEKHEDKVDPLA 221
Query: 253 EKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
EKA E++KQY VFDEKVL S+IP +LK K
Sbjct: 222 EKAMKELQKQYVVFDEKVL----SKIPIASLKAK 251
>TAIR|locus:2082772 [details] [associations]
symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
Uniprot:F4JFD4
Length = 264
Score = 336 (123.3 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 67/128 (52%), Positives = 84/128 (65%)
Query: 1 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXX-XAFKSKVFRLFGREKPIH 59
MAE + ++SL+EKI A K+K++RLFGREKP+H
Sbjct: 1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL S
Sbjct: 61 KVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLS 120
Query: 120 NASTFINK 127
NA F+NK
Sbjct: 121 NAHAFMNK 128
Score = 168 (64.2 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 212 WIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVL 271
W V L C L+ ++ FV+LHTVP++YEK+EDK+D EK E+KK Y VFDEKVL
Sbjct: 193 WAVDNLGCGKLVQ-LLDSCFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVL 251
Query: 272 KKVLSRIPKGALKKK 286
S++P +LK K
Sbjct: 252 ----SKLPVASLKAK 262
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 327 (120.2 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 63/152 (41%), Positives = 91/152 (59%)
Query: 47 KVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCH 106
K +LF R++ IH + G GK ADI LWR KI+A ++ G + +W L E++EY+ ITL+CH
Sbjct: 19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICH 78
Query: 107 ISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASG 166
S+ S+ F+WS AS F+N P IP V L E + A + N+ L L ++A G
Sbjct: 79 ASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACG 138
Query: 167 RDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIG 198
RD F L+++SI+G + NFV L +IG
Sbjct: 139 RDPPLFFLTTISLYIVSIIGTYFNFVNLLFIG 170
Score = 113 (44.8 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 231 FVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
FV + T+PV+YE YED +D+ K ++KK Y +KV VLS+IP+G +K K
Sbjct: 171 FVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLY----KKVDTNVLSKIPRGTVKNK 222
>TAIR|locus:2049077 [details] [associations]
symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
UniGene:At.40435 ProteinModelPortal:Q6NPD8
EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
Uniprot:Q6NPD8
Length = 201
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 59/177 (33%), Positives = 100/177 (56%)
Query: 55 EKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAV 114
E+ +H + G AD+ +W+N++ +LG T +W LFE Y V + +LS+ +
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 115 LFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG 174
LFLW+ ++ N+ P++P + + E+FV A A+R IN LAV REI GR+ K+
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 175 VIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVF 231
V LW +S VGN+ NF+T+ Y+G SL++ + ++ + + L L + +T +
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQY 178
>TAIR|locus:2080315 [details] [associations]
symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
Length = 203
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 55/185 (29%), Positives = 105/185 (56%)
Query: 50 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI 109
+LF R++ IH +LG G AD+ LWR K +S G++ A W++FE Y + TL+ + +
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 110 LSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDL 169
L L++LFLWS +++ +N+ P +P + E E + LR +N+ L V +IA RD
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 170 KKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFET 229
+ + V L+LLS++G+ +F TL + + + A++ ++ +++ ++ +
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNKTRE 186
Query: 230 VFVLL 234
+++ L
Sbjct: 187 LYLRL 191
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 58/186 (31%), Positives = 102/186 (54%)
Query: 68 ADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINK 127
AD+ LWRN+ + +L +T W LFE Y+L++ V ++ +L +A+ FLW+ ++T +N+
Sbjct: 7 ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 66
Query: 128 SPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG-LWLLSIVG 186
P +P + +PE+F + A LR IN L++ +I R+ + L V LW +I
Sbjct: 67 PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQ-TICC 125
Query: 187 NWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVF--VLLH-TVPVIYEK 243
+ F+ + Y+ S V + +++ + + L S V+ VLL + P++YEK
Sbjct: 126 IFL-FLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEK 184
Query: 244 YEDKID 249
Y+D ID
Sbjct: 185 YQDHID 190
>TAIR|locus:2046783 [details] [associations]
symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0071458 "integral to cytosolic side of
endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
"endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
Length = 206
Score = 191 (72.3 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 38/130 (29%), Positives = 70/130 (53%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKS 128
DI+LWR KK++ L +T+ W+L + IT+V I I ++++FLW + ++K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 129 PPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNW 188
PE+ + + E+FV+E + R + + + + + + F + G W+LS +GN
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 189 CNFVTLFYIG 198
+F T +IG
Sbjct: 138 LDFHTCLFIG 147
Score = 50 (22.7 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 236 TVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKK 285
TVP ++E+Y D+I + K Y EK+L+ + +++ G +K
Sbjct: 153 TVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILE-MKNKLHHGTEEK 201
>TAIR|locus:1005716554 [details] [associations]
symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
OMA:HDITLGK Uniprot:F4J500
Length = 249
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 44/158 (27%), Positives = 85/158 (53%)
Query: 68 ADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINK 127
AD+ LWR + +S GV+ +T W++FE +++ + ++ + + F+ + S F N+
Sbjct: 64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123
Query: 128 SPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG-VIAGLWLLSIVG 186
+P + L E+ V A++ R ++N L + ++ G D + F V+ LWLLS +G
Sbjct: 124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183
Query: 187 NWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLY 224
++ + TL YIG S+ + A + K+ + KC ++
Sbjct: 184 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIH 221
>UNIPROTKB|Q08D83 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG000838
HOGENOM:HOG000015254 EMBL:BT030534 EMBL:BC123892 EMBL:BC149634
EMBL:BK001797 IPI:IPI00687234 IPI:IPI00837997 RefSeq:NP_872598.1
UniGene:Bt.16079 ProteinModelPortal:Q08D83 SMR:Q08D83 PRIDE:Q08D83
GeneID:359721 KEGG:bta:359721 CTD:10313 eggNOG:NOG303514
InParanoid:Q08D83 OrthoDB:EOG4229M0 NextBio:20812750 Uniprot:Q08D83
Length = 256
Score = 108 (43.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 35/141 (24%), Positives = 68/141 (48%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 70 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 127
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 128 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 187
Query: 179 LWLLSIVGNWCNFVTLFYIGK 199
+WL++ VG N +TL + +
Sbjct: 188 MWLMTYVGAVFNGITLLILAE 208
Score = 68 (29.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 15/55 (27%), Positives = 34/55 (61%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
+L+ ++P++YEKY+ +ID + + I + + +++K+ +++P G KKK
Sbjct: 209 LLVFSIPIVYEKYKTQIDHY-----VGIARDQT---KSIVEKIQAKLP-GIAKKK 254
>UNIPROTKB|J9P9U4 [details] [associations]
symbol:J9P9U4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:IICPYNI
EMBL:AAEX03011658 EMBL:AAEX03011657 Ensembl:ENSCAFT00000043047
Uniprot:J9P9U4
Length = 296
Score = 108 (43.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 35/141 (24%), Positives = 68/141 (48%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 110 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 167
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 168 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 227
Query: 179 LWLLSIVGNWCNFVTLFYIGK 199
+WL++ VG N +TL + +
Sbjct: 228 MWLMTYVGAVFNGITLLILAE 248
Score = 70 (29.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
+L+ +VP++YEKY+ +ID + + I + + +++K+ +++P G KKK
Sbjct: 249 LLIFSVPIVYEKYKTQIDHY-----VGIARDQT---KSIVEKIQAKLP-GIAKKK 294
>UNIPROTKB|D4A1U2 [details] [associations]
symbol:Rtn3 "Reticulon 3, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0005783 EMBL:CH473953 PANTHER:PTHR10994
UniGene:Rn.11652 IPI:IPI00562895 Ensembl:ENSRNOT00000046063
Uniprot:D4A1U2
Length = 256
Score = 104 (41.7 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 34/154 (22%), Positives = 73/154 (47%)
Query: 56 KPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLA 113
+P+ + + D+ WR+ K + V G T + +L L + +I++V ++ ++LS+
Sbjct: 58 QPVS-IFSTSQVHDLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVT 114
Query: 114 VLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIAS 165
+ F ++ + + KS P +TL + + +A +N+AL ++ +
Sbjct: 115 ISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFL 174
Query: 166 GRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGK 199
DL L + +WL++ VG N +TL + +
Sbjct: 175 VEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAE 208
Score = 69 (29.3 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
+L+ +VP++YEKY+ +ID + + I + + +++K+ +++P G KKK
Sbjct: 209 LLVFSVPIVYEKYKTQIDHY-----VGIARDQT---KSIVEKIQAKLP-GIAKKK 254
>ZFIN|ZDB-GENE-030710-3 [details] [associations]
symbol:rtn1b "reticulon 1b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-3 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG008971 HOGENOM:HOG000134444 EMBL:AY555034
IPI:IPI00650731 UniGene:Dr.673 ProteinModelPortal:Q4G5W7 SMR:Q4G5W7
PRIDE:Q4G5W7 InParanoid:Q4G5W7 ArrayExpress:Q4G5W7 Bgee:Q4G5W7
Uniprot:Q4G5W7
Length = 767
Score = 106 (42.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 36/139 (25%), Positives = 68/139 (48%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLA--VLF-LWSNAS 122
K ++ WR+ K S V G M LF L ++ ++++V ++++ SL+ + F ++ +
Sbjct: 579 KAMELLYWRDLKKSGLVFGSLLLM--LFSLTQFSVVSVVAYLALASLSATISFRVYKSVL 636
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P ++L + ++A ++Y IN L LR + +DL L
Sbjct: 637 QAVQKTDEGHPFKVYLDVEMSLSHDQMQKYAENVQYYINSTLKELRRLFLVQDLVDSLKF 696
Query: 176 IAGLWLLSIVGNWCNFVTL 194
+WLL+ VG N +TL
Sbjct: 697 AVLMWLLTYVGALFNGLTL 715
Score = 77 (32.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 204 VLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQY 263
VLM + L ++ L L LL V V + ++PV+YEKY+ +ID + + ++
Sbjct: 698 VLM-WLLTYVGALFNGLTLLI----MVVVCMFSMPVVYEKYQAQIDQYVDLIRTQVNSVV 752
Query: 264 AVFDEKV 270
A EKV
Sbjct: 753 AKIQEKV 759
>UNIPROTKB|E1BUW7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00821143 Ensembl:ENSGALT00000040236 ArrayExpress:E1BUW7
Uniprot:E1BUW7
Length = 347
Score = 114 (45.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 40/160 (25%), Positives = 76/160 (47%)
Query: 48 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI 107
+F L +P+ H AG D+ WR+ K GV+ GA+ +++L L + ++++ +I
Sbjct: 142 LFALPATSEPLMHS-SAGNIVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYI 198
Query: 108 SI--LSLAVLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRAL 157
++ LS+ + F ++ I KS P V + E+ + +++S + IN +
Sbjct: 199 ALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTV 258
Query: 158 AVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYI 197
LR + DL L +W+ + VG N +TL +
Sbjct: 259 KELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLIL 298
Score = 56 (24.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
+ L +VPVIYE+++ +ID + +K A K+
Sbjct: 301 ISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKI 339
>UNIPROTKB|Q7YRW9 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
UniGene:Bt.105155 GeneID:359718 KEGG:bta:359718 NextBio:20812748
EMBL:BC116111 EMBL:AY164744 IPI:IPI00718559 RefSeq:NP_001068606.1
SMR:Q7YRW9 STRING:Q7YRW9 Ensembl:ENSBTAT00000014744 Uniprot:Q7YRW9
Length = 199
Score = 97 (39.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 34/142 (23%), Positives = 68/142 (47%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
I KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 128
Query: 176 IAGLWLLSIVGNWCNFVTLFYI 197
+W+ + VG N +TL +
Sbjct: 129 AVLMWVFTYVGALFNGLTLLIL 150
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
+ L +VPVIYE+++ +ID + A +K A K+
Sbjct: 153 ISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 191
>UNIPROTKB|Q6IM70 [details] [associations]
symbol:RTN4 "RTN4-C" species:9823 "Sus scrofa" [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 eggNOG:NOG306139 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 OMA:NWKCQAI EMBL:CU929931
EMBL:CU928339 EMBL:BK001795 RefSeq:NP_001123435.1 UniGene:Ssc.94392
SMR:Q6IM70 STRING:Q6IM70 Ensembl:ENSSSCT00000009205
GeneID:100170118 KEGG:ssc:100170118 Uniprot:Q6IM70
Length = 199
Score = 97 (39.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 34/142 (23%), Positives = 68/142 (47%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
I KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 128
Query: 176 IAGLWLLSIVGNWCNFVTLFYI 197
+W+ + VG N +TL +
Sbjct: 129 AVLMWVFTYVGALFNGLTLLIL 150
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
+ L +VPVIYE+++ +ID + A +K A K+
Sbjct: 153 ISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 191
>UNIPROTKB|F1NCK0 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00820463 Ensembl:ENSGALT00000013195 ArrayExpress:F1NCK0
Uniprot:F1NCK0
Length = 199
Score = 100 (40.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 35/142 (24%), Positives = 68/142 (47%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
I KS P V + E+ + +++S + IN + LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKF 128
Query: 176 IAGLWLLSIVGNWCNFVTLFYI 197
+W+ + VG N +TL +
Sbjct: 129 AVLMWVFTYVGALFNGLTLLIL 150
Score = 56 (24.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
+ L +VPVIYE+++ +ID + +K A K+
Sbjct: 153 ISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKI 191
>ZFIN|ZDB-GENE-030710-2 [details] [associations]
symbol:rtn4b "reticulon 4b" species:7955 "Danio
rerio" [GO:0005199 "structural constituent of cell wall"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 InterPro:IPR003882 Pfam:PF02453 PRINTS:PR01218
PROSITE:PS50845 ZFIN:ZDB-GENE-030710-2 GO:GO:0005783 GO:GO:0005199
PANTHER:PTHR10994 EMBL:AY555051 IPI:IPI00650525
RefSeq:NP_001035425.1 UniGene:Dr.79909 ProteinModelPortal:Q4G5V0
PRIDE:Q4G5V0 GeneID:678586 KEGG:dre:678586 CTD:678586
HOVERGEN:HBG096757 InParanoid:Q4G5V0 NextBio:20902411 Bgee:Q4G5V0
Uniprot:Q4G5V0
Length = 875
Score = 115 (45.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 53/158 (33%), Positives = 68/158 (43%)
Query: 57 PIHHVLGAGKPAD------IFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISIL 110
P H GA PAD + WR+ + SA VLG + +LF L + V S L
Sbjct: 674 PAGHTAGA--PADPTAVLQLLYWRDVRASALVLGSLLLL-LLF--LSCCSVISVLSYSAL 728
Query: 111 SLAVLFLWSNASTFI----NKSPPEIPVVTLPEKFVLEFASA-------LRYEINRALAV 159
L L L + T + K+ P E+ VL A A L IN AL
Sbjct: 729 CLLTLTLSTRVFTAVLQAMRKTEDGHPFRQYLERDVLLSADAVHTHSEALLRRINTALVE 788
Query: 160 LREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYI 197
LR + DL L + GLWLL+ VG+W N +TL I
Sbjct: 789 LRRLFLVEDLVDSLKLAVGLWLLTYVGSWFNGLTLLII 826
Score = 59 (25.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 203 LVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQ 262
L L+ Y W L + L G+F P+ YE+++ +ID F ++++
Sbjct: 808 LWLLTYVGSWFNGLTLLIIALIGAFSG--------PIAYERHQSEIDQFISMINTQMRE- 858
Query: 263 YAVFDEKVLKKVLSRIPKGALKKKD 287
L KVL+ +P G KK D
Sbjct: 859 -------ALGKVLAMVP-GGKKKSD 875
>UNIPROTKB|A8MT72 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 HGNC:HGNC:10467 ChiTaRS:RTN1
HOGENOM:HOG000015254 EMBL:AL121694 EMBL:AL133299 EMBL:AL139194
IPI:IPI00794113 ProteinModelPortal:A8MT72 SMR:A8MT72 STRING:A8MT72
PRIDE:A8MT72 Ensembl:ENST00000395090 UCSC:uc010apl.2
ArrayExpress:A8MT72 Bgee:A8MT72 Uniprot:A8MT72
Length = 193
Score = 118 (46.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/156 (23%), Positives = 77/156 (49%)
Query: 67 PA-DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
PA D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ +
Sbjct: 5 PAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 62
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 63 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 122
Query: 176 IAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLK 211
+WLL+ VG N +TL + L ++K
Sbjct: 123 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVK 158
>UNIPROTKB|F1PVP5 [details] [associations]
symbol:F1PVP5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03011658
EMBL:AAEX03011657 Ensembl:ENSCAFT00000023909 Uniprot:F1PVP5
Length = 1042
Score = 106 (42.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/142 (24%), Positives = 68/142 (47%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 855 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 912
Query: 126 NKSPPEIPV--------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIA 177
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 913 QKSEEGHPFKRAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 972
Query: 178 GLWLLSIVGNWCNFVTLFYIGK 199
+WL++ VG N +TL + +
Sbjct: 973 FMWLMTYVGAVFNGITLLILAE 994
Score = 70 (29.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
+L+ +VP++YEKY+ +ID + + I + + +++K+ +++P G KKK
Sbjct: 995 LLIFSVPIVYEKYKTQIDHY-----VGIARDQT---KSIVEKIQAKLP-GIAKKK 1040
>ZFIN|ZDB-GENE-030710-5 [details] [associations]
symbol:rtn3 "reticulon 3" species:7955 "Danio rerio"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-5 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 eggNOG:NOG303514 OrthoDB:EOG4229M0
EMBL:CT030012 EMBL:CU457795 EMBL:AY555038 IPI:IPI00774300
RefSeq:XP_003198973.1 UniGene:Dr.130204 SMR:Q4G5W3
Ensembl:ENSDART00000041088 Ensembl:ENSDART00000124244
GeneID:100538268 KEGG:dre:100538268 InParanoid:Q4G5W3
Uniprot:Q4G5W3
Length = 236
Score = 97 (39.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 35/139 (25%), Positives = 66/139 (47%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K S GV+ G + + +L L + +I++V ++ S+L + + F ++ + +
Sbjct: 49 DLVHWRDPKKS-GVVFGVSLL-LLLSLAAFSVISVVSYLLLSLLCVTISFRIYKSVIQAV 106
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P VT+P + + +NRAL + + DL L +
Sbjct: 107 QKSNEGHPFKALMDKDVTVPPETFRKHVDGCLSHVNRALKQMSRLFLVEDLVDSLKLAVV 166
Query: 179 LWLLSIVGNWCNFVTLFYI 197
+WLL+ VG N +T+ +
Sbjct: 167 MWLLTYVGAVFNGITILIL 185
Score = 61 (26.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
+LL +VP IYEK + +ID + + A + A EK+
Sbjct: 188 ILLFSVPPIYEKNKTQIDHYIDIARTQFNTTVAKLQEKL 226
>UNIPROTKB|F1PNX5 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:DPKKSGI
EMBL:AAEX03005762 Ensembl:ENSCAFT00000024693 Uniprot:F1PNX5
Length = 208
Score = 118 (46.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 39/172 (22%), Positives = 82/172 (47%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 81 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETV 230
+WLL+ VG N +TL + L ++K + + L L+ TV
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTV 192
>UNIPROTKB|Q1LZ76 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:DAAA02029288
EMBL:DAAA02029289 EMBL:BC116162 IPI:IPI00904153 UniGene:Bt.22982
SMR:Q1LZ76 STRING:Q1LZ76 Ensembl:ENSBTAT00000015218
NextBio:20875732 Uniprot:Q1LZ76
Length = 208
Score = 117 (46.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 35/153 (22%), Positives = 75/153 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLK 211
+WLL+ VG N +TL + L ++K
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVK 173
>RGD|620988 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization"
evidence=IEA;ISO] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
CTD:10313 eggNOG:NOG303514 HOVERGEN:HBG093922 EMBL:AY164698
EMBL:AY496443 EMBL:AF442357 EMBL:AF442358 EMBL:BC062068
EMBL:BC107448 IPI:IPI00421904 IPI:IPI00564622 RefSeq:NP_001009953.2
RefSeq:NP_543185.2 UniGene:Rn.11652 ProteinModelPortal:Q6RJR6
SMR:Q6RJR6 IntAct:Q6RJR6 STRING:Q6RJR6 PRIDE:Q6RJR6
Ensembl:ENSRNOT00000028785 Ensembl:ENSRNOT00000049812 GeneID:140945
KEGG:rno:140945 UCSC:RGD:620988 HOGENOM:HOG000154220 NextBio:620854
ArrayExpress:Q6RJR6 Genevestigator:Q6RJR6 Uniprot:Q6RJR6
Length = 940
Score = 103 (41.3 bits), Expect = 5.3e-05, Sum P(2) = 5.2e-05
Identities = 33/141 (23%), Positives = 68/141 (48%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 754 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A +N+AL ++ + DL L +
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 179 LWLLSIVGNWCNFVTLFYIGK 199
+WL++ VG N +TL + +
Sbjct: 872 MWLMTYVGAVFNGITLLILAE 892
Score = 69 (29.3 bits), Expect = 5.3e-05, Sum P(2) = 5.2e-05
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
+L+ +VP++YEKY+ +ID + + I + + +++K+ +++P G KKK
Sbjct: 893 LLVFSVPIVYEKYKTQIDHY-----VGIARDQT---KSIVEKIQAKLP-GIAKKK 938
>UNIPROTKB|I3LBH0 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 CTD:6252 GeneTree:ENSGT00390000009934
EMBL:CU469078 EMBL:FP340567 UniGene:Ssc.13916 GeneID:100152394
KEGG:ssc:100152394 RefSeq:NP_001231570.1 RefSeq:XP_003480527.1
ProteinModelPortal:I3LBH0 SMR:I3LBH0 Ensembl:ENSSSCT00000032115
Uniprot:I3LBH0
Length = 208
Score = 116 (45.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 35/153 (22%), Positives = 75/153 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLK 211
+WLL+ VG N +TL + L ++K
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVK 173
>UNIPROTKB|F1P5B2 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00594028 Ensembl:ENSGALT00000040233 ArrayExpress:F1P5B2
Uniprot:F1P5B2
Length = 344
Score = 103 (41.3 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 38/160 (23%), Positives = 75/160 (46%)
Query: 48 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI 107
+F L +P+ H + D+ WR+ K GV+ GA+ +++L L + ++++ +I
Sbjct: 141 LFALPATSEPLMH---SSAVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYI 195
Query: 108 SI--LSLAVLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRAL 157
++ LS+ + F ++ I KS P V + E+ + +++S + IN +
Sbjct: 196 ALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTV 255
Query: 158 AVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYI 197
LR + DL L +W+ + VG N +TL +
Sbjct: 256 KELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLIL 295
Score = 56 (24.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
+ L +VPVIYE+++ +ID + +K A K+
Sbjct: 298 ISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKI 336
>UNIPROTKB|H7C106 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 ProteinModelPortal:H7C106 PRIDE:H7C106
Ensembl:ENST00000438462 OMA:NWKCQAI Uniprot:H7C106
Length = 203
Score = 95 (38.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/146 (23%), Positives = 69/146 (47%)
Query: 63 GAGKPA-DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LW 118
G P D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++
Sbjct: 24 GPWSPVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIY 81
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
I KS P V + E+ V +++++ +N + LR + DL
Sbjct: 82 KGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVD 141
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYI 197
L +W+ + VG N +TL +
Sbjct: 142 SLKFAVLMWVFTYVGALFNGLTLLIL 167
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYA 264
+ L +VPVIYE+++ +ID + A +K A
Sbjct: 170 ISLFSVPVIYERHQAQIDHYLGLANKNVKDAMA 202
>UNIPROTKB|F1P5B1 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00823248 Ensembl:ENSGALT00000040235 ArrayExpress:F1P5B1
Uniprot:F1P5B1
Length = 326
Score = 101 (40.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 37/153 (24%), Positives = 72/153 (47%)
Query: 56 KPIHHVLGAGKPA-DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSL 112
+P V +G D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+
Sbjct: 127 EPRRRVSSSGSAVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSV 184
Query: 113 AVLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIA 164
+ F ++ I KS P V + E+ + +++S + IN + LR +
Sbjct: 185 TISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLF 244
Query: 165 SGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYI 197
DL L +W+ + VG N +TL +
Sbjct: 245 LVDDLVDSLKFAVLMWVFTYVGALFNGLTLLIL 277
Score = 56 (24.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
+ L +VPVIYE+++ +ID + +K A K+
Sbjct: 280 ISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKI 318
>UNIPROTKB|E1BP30 [details] [associations]
symbol:E1BP30 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:DAAA02029288 EMBL:DAAA02029289
IPI:IPI00924046 Ensembl:ENSBTAT00000061568 ArrayExpress:E1BP30
Uniprot:E1BP30
Length = 697
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 37/160 (23%), Positives = 77/160 (48%)
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LW 118
L K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++
Sbjct: 505 LNKQKAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIY 562
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
+ + K+ P +TL ++ + ++ L++ +N L LR + +DL
Sbjct: 563 KSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVD 622
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLK 211
L +WLL+ VG N +TL + L ++K
Sbjct: 623 SLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVK 662
>UNIPROTKB|I3L6J1 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 CTD:6252 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:CU469078 EMBL:FP340567
RefSeq:NP_001231569.1 RefSeq:XP_003480528.1 UniGene:Ssc.13916
Ensembl:ENSSSCT00000022854 GeneID:100152394 KEGG:ssc:100152394
Uniprot:I3L6J1
Length = 770
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 37/160 (23%), Positives = 77/160 (48%)
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LW 118
L K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++
Sbjct: 578 LNKQKAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIY 635
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
+ + K+ P +TL ++ + ++ L++ +N L LR + +DL
Sbjct: 636 KSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVD 695
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLK 211
L +WLL+ VG N +TL + L ++K
Sbjct: 696 SLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVK 735
>UNIPROTKB|Q16799 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 EMBL:CH471061 GO:GO:0030182 GO:GO:0004871
GO:GO:0030176 PANTHER:PTHR10994 HOVERGEN:HBG008971 EMBL:L10333
EMBL:L10334 EMBL:L10335 EMBL:BC090862 EMBL:BC000314 EMBL:BC003003
IPI:IPI00003971 IPI:IPI00219812 IPI:IPI00219813 PIR:A46583
PIR:I60904 RefSeq:NP_066959.1 RefSeq:NP_996734.1 UniGene:Hs.368626
ProteinModelPortal:Q16799 SMR:Q16799 IntAct:Q16799 MINT:MINT-154554
STRING:Q16799 PhosphoSite:Q16799 DMDM:12643733 PaxDb:Q16799
PRIDE:Q16799 Ensembl:ENST00000267484 Ensembl:ENST00000342503
GeneID:6252 KEGG:hsa:6252 UCSC:uc001xek.2 UCSC:uc001xem.1
UCSC:uc001xen.1 CTD:6252 GeneCards:GC14M060062 HGNC:HGNC:10467
HPA:CAB002745 MIM:600865 neXtProt:NX_Q16799 PharmGKB:PA34880
eggNOG:NOG306139 HOGENOM:HOG000134444 InParanoid:Q16799 OMA:PFLNKQK
OrthoDB:EOG437RDX PhylomeDB:Q16799 ChiTaRS:RTN1 GenomeRNAi:6252
NextBio:24277 ArrayExpress:Q16799 Bgee:Q16799 CleanEx:HS_RTN1
Genevestigator:Q16799 GermOnline:ENSG00000139970 Uniprot:Q16799
Length = 776
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 37/160 (23%), Positives = 77/160 (48%)
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LW 118
L K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++
Sbjct: 584 LNKQKAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIY 641
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
+ + K+ P +TL ++ + ++ L++ +N L LR + +DL
Sbjct: 642 KSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVD 701
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLK 211
L +WLL+ VG N +TL + L ++K
Sbjct: 702 SLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVK 741
>UNIPROTKB|F1Q2B3 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000039479 Uniprot:F1Q2B3
Length = 715
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 42/181 (23%), Positives = 85/181 (46%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 524 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 581
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 582 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 641
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFV---LLH 235
+WLL+ VG N +TL + L ++K + + L L+ TV L H
Sbjct: 642 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKSDLQH 701
Query: 236 T 236
T
Sbjct: 702 T 702
>UNIPROTKB|F8W914 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01011809
ProteinModelPortal:F8W914 SMR:F8W914 Ensembl:ENST00000402434
ArrayExpress:F8W914 Bgee:F8W914 Uniprot:F8W914
Length = 345
Score = 94 (38.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 160 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 217
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 218 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 277
Query: 179 LWLLSIVGNWCNFVTLFYI 197
+W+ + VG N +TL +
Sbjct: 278 MWVFTYVGALFNGLTLLIL 296
Score = 60 (26.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
+ L +VPVIYE+++ +ID + A +K A K+
Sbjct: 299 ISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 337
>UNIPROTKB|F1Q231 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000024697 Uniprot:F1Q231
Length = 704
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 39/172 (22%), Positives = 82/172 (47%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 519 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 576
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 577 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 636
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETV 230
+WLL+ VG N +TL + L ++K + + L L+ TV
Sbjct: 637 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTV 688
>UNIPROTKB|Q1RMR8 [details] [associations]
symbol:RTN4 "RTN4 protein" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
EMBL:BC114748 IPI:IPI00730691 RefSeq:NP_001106692.1
UniGene:Bt.105155 SMR:Q1RMR8 STRING:Q1RMR8
Ensembl:ENSBTAT00000036144 GeneID:359718 KEGG:bta:359718
NextBio:20812748 Uniprot:Q1RMR8
Length = 379
Score = 94 (38.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 194 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 251
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 252 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 311
Query: 179 LWLLSIVGNWCNFVTLFYI 197
+W+ + VG N +TL +
Sbjct: 312 MWVFTYVGALFNGLTLLIL 330
Score = 60 (26.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 232 VLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 270
+ L +VPVIYE+++ +ID + A +K A K+
Sbjct: 333 ISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 371
>RGD|620986 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=ISO] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 RGD:620986 GO:GO:0016021 GO:GO:0030182
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252
eggNOG:NOG306139 OrthoDB:EOG437RDX GeneTree:ENSGT00390000009934
EMBL:U17604 EMBL:U17603 IPI:IPI00213559 IPI:IPI00231126
RefSeq:NP_446317.1 UniGene:Rn.55126 ProteinModelPortal:Q64548
SMR:Q64548 STRING:Q64548 PRIDE:Q64548 Ensembl:ENSRNOT00000006373
GeneID:116644 KEGG:rno:116644 UCSC:RGD:620986 HOGENOM:HOG000015254
NextBio:619379 Genevestigator:Q64548 Uniprot:Q64548
Length = 777
Score = 115 (45.5 bits), Expect = 0.00098, P = 0.00097
Identities = 36/156 (23%), Positives = 75/156 (48%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ +
Sbjct: 589 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 646
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P +TL ++ + ++ L+ +N L LR + +DL L
Sbjct: 647 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 706
Query: 176 IAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLK 211
+WLL+ VG N +TL + L ++K
Sbjct: 707 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVK 742
>MGI|MGI:1933947 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1933947
GO:GO:0005783 GO:GO:0016021 GO:GO:0030182 GO:GO:0005789
PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
HOGENOM:HOG000134444 OrthoDB:EOG437RDX ChiTaRS:RTN1 EMBL:AB074899
EMBL:BC030455 EMBL:BC053926 EMBL:BC058579 EMBL:BK001694
IPI:IPI00395193 RefSeq:NP_001007597.1 RefSeq:NP_703187.2
UniGene:Mm.221275 ProteinModelPortal:Q8K0T0 SMR:Q8K0T0
IntAct:Q8K0T0 STRING:Q8K0T0 PhosphoSite:Q8K0T0 PaxDb:Q8K0T0
PRIDE:Q8K0T0 Ensembl:ENSMUST00000078505 GeneID:104001
KEGG:mmu:104001 GeneTree:ENSGT00390000009934 InParanoid:Q8K0T0
NextBio:356325 Bgee:Q8K0T0 CleanEx:MM_RTN1 Genevestigator:Q8K0T0
GermOnline:ENSMUSG00000021087 Uniprot:Q8K0T0
Length = 780
Score = 115 (45.5 bits), Expect = 0.00098, P = 0.00098
Identities = 36/156 (23%), Positives = 75/156 (48%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ +
Sbjct: 592 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 649
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P +TL ++ + ++ L+ +N L LR + +DL L
Sbjct: 650 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 709
Query: 176 IAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLK 211
+WLL+ VG N +TL + L ++K
Sbjct: 710 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVK 745
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.141 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 287 265 0.00093 114 3 11 22 0.40 33
32 0.50 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 611 (65 KB)
Total size of DFA: 199 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.61u 0.09s 20.70t Elapsed: 00:00:01
Total cpu time: 20.61u 0.09s 20.70t Elapsed: 00:00:01
Start: Sat May 11 12:15:52 2013 End: Sat May 11 12:15:53 2013