BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023137
(287 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1
SV=1
Length = 255
Score = 302 bits (773), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/287 (59%), Positives = 202/287 (70%), Gaps = 37/287 (12%)
Query: 5 APEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDA-FKSKVFRLFGREKPIHHVLG 63
A EH+ ++S++EKI++KIHGHD SSS S D A K+K++RLFGRE+P+H + G
Sbjct: 2 AEEHKH-EESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFG 60
Query: 64 AGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNAST 123
GKPADIFLWRNKK+S GVLG AT W+LFELLEY+L+TL HISIL+LAVLFLWS+AST
Sbjct: 61 GGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSAST 120
Query: 124 FINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLS 183
FI+KSP IP V +PE VL+ AS LR EINR VLR+IASGRDLKKFL VIAGLW+LS
Sbjct: 121 FIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLS 180
Query: 184 IVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEK 243
VG+ CNF+TL YI VLL T+PV+YEK
Sbjct: 181 KVGSSCNFLTLIYIAT--------------------------------VLLFTIPVLYEK 208
Query: 244 YEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGA---LKKKD 287
YEDK+D FGEKA EIKKQY FD KVL KV+S+IPKGA +KKKD
Sbjct: 209 YEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKGAFAFIKKKD 255
>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1
SV=1
Length = 255
Score = 295 bits (755), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/287 (54%), Positives = 202/287 (70%), Gaps = 37/287 (12%)
Query: 1 MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDD-DKPSSIDAFKSKVFRLFGREKPIH 59
MAE + +++SL+EKI++KIH HDSSSS + +KP S A K+K++R+FGREKP+H
Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG GKPAD+FLWR+KK+S VLG ATA+WVLFEL+EYHL++L+CHISIL+L LFLWS
Sbjct: 61 KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120
Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
NA T INK+ P+IP + +PE+ L AS+LR E+N+A +LR IA GRDLKKFL V+ GL
Sbjct: 121 NAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGL 180
Query: 180 WLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPV 239
W++S+VGNW NF+TL YI C FV+LHTVP+
Sbjct: 181 WIISVVGNWFNFLTLVYI---------------------C-----------FVILHTVPM 208
Query: 240 IYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
+YEK+EDK+D EKA E++KQY VFDE KVLS+IP +LK K
Sbjct: 209 LYEKHEDKVDPLAEKAMKELQKQYVVFDE----KVLSKIPIASLKAK 251
>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1
SV=1
Length = 257
Score = 293 bits (750), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 159/285 (55%), Positives = 194/285 (68%), Gaps = 37/285 (12%)
Query: 7 EHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSK-----VFRLFGREKPIHHV 61
E ++S++EKI +KIHGH SSS SD D + S ++RLFGREKP+H V
Sbjct: 3 EDHKHEESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKV 62
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNA 121
LG GKPADIFLWRNKK+S GVLG TA WVLFEL EYHL+ +CH +I +LA LFLWSNA
Sbjct: 63 LGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNA 122
Query: 122 STFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWL 181
TFI+KS P IP V +PE +L+ S LR EINR L +LR IASG+D+KKF+ VIAGLW+
Sbjct: 123 CTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWV 182
Query: 182 LSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIY 241
LSI+G+ NF+TLFY T VLL T+PV+Y
Sbjct: 183 LSIIGSCYNFLTLFY--------------------------------TATVLLFTIPVLY 210
Query: 242 EKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
EKYEDK+D++GEKA EIKKQYAV DEKVL+KV+S+IP+GAL KK
Sbjct: 211 EKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKK 255
>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1
SV=1
Length = 275
Score = 280 bits (715), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/239 (59%), Positives = 170/239 (71%), Gaps = 36/239 (15%)
Query: 48 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI 107
V+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+TL+CH+
Sbjct: 70 VYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHV 129
Query: 108 SILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGR 167
I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR + LREIASGR
Sbjct: 130 MIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGR 189
Query: 168 DLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSF 227
DLKKFL IAGLW+LSI+G NF+TL YI
Sbjct: 190 DLKKFLIAIAGLWVLSILGGCFNFLTLAYIA----------------------------- 220
Query: 228 ETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
VLL TVP+ Y+KYEDK+D GEKA IE+KKQYAV DE KVLS+IP G LK K
Sbjct: 221 ---LVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDE----KVLSKIPLGPLKNK 272
>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1
SV=1
Length = 271
Score = 273 bits (698), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/281 (53%), Positives = 191/281 (67%), Gaps = 43/281 (15%)
Query: 13 KSLVEKITDKIHGHDSSS-------SDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAG 65
+SL+EK+++KIH SS + SS + KSKV+RLFGRE+P+H VLG G
Sbjct: 24 ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFI 125
KPADIF+W++KK+S GV GGAT WVLFEL+EYHL+TL+CH+ I++LAVLFLWSNA+ FI
Sbjct: 84 KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143
Query: 126 NKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIV 185
+KSPP+IP V +PE+ +L+ AS LR EINR ++ LREIASGRD+KKFL IAGLW+LSI+
Sbjct: 144 HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSIL 203
Query: 186 GNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYE 245
G +F+TL YI VLL TVP+ Y+KYE
Sbjct: 204 GGCYSFLTLAYIA--------------------------------LVLLFTVPLFYDKYE 231
Query: 246 DKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
DK+DS+GEKA E+KKQYAV D KV S+IP+G LK K
Sbjct: 232 DKVDSYGEKAMAELKKQYAVLD----AKVFSKIPRGPLKDK 268
>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1
SV=1
Length = 253
Score = 271 bits (694), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 193/287 (67%), Gaps = 37/287 (12%)
Query: 1 MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDD-KPSSIDAFKSKVFRLFGREKPIH 59
MAE + ++SL+EKI DKIH HDSSSS + KP S A K+K++RLFGREKP+H
Sbjct: 1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL S
Sbjct: 61 KVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLS 120
Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
NA F+NK+PP+IP + + E+ L SALR E+N+A +LR IA GRDLKKFL V+ GL
Sbjct: 121 NAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGL 180
Query: 180 WLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPV 239
W++S+VGNW NF+TL YI C FV+LHTVP+
Sbjct: 181 WIISVVGNWFNFLTLVYI---------------------C-----------FVVLHTVPM 208
Query: 240 IYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
+YEK+EDK+D EK E+KK Y VFDE KVLS++P +LK K
Sbjct: 209 LYEKHEDKVDPVAEKTLKELKKHYMVFDE----KVLSKLPVASLKAK 251
>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1
SV=1
Length = 247
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 43/275 (15%)
Query: 15 LVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWR 74
LV+ T+ + + SS + + D+ S+ RLF R+KPIHHVLG GK AD+ LWR
Sbjct: 14 LVDNFTETVQKNKHGSSFFEQE-----DSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWR 68
Query: 75 NKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPV 134
NKKISA VL GATA+WVLFE + +H ++LVC+ +L + F+WSNAS F+N+S +P
Sbjct: 69 NKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPR 128
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+ LP+ F E A+ E+NR L L+++A +LK+FL + GLW+ ++VG+ CNF+T+
Sbjct: 129 LVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTV 188
Query: 195 FYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEK 254
YIG FV HT+PV+YE+YED++D F +
Sbjct: 189 LYIG--------------------------------FVGAHTMPVLYERYEDEVDGFMDS 216
Query: 255 ATIEIKKQYAVFDEKVLKKVLSRIPKG--ALKKKD 287
++ Y D LSRIP G LKK++
Sbjct: 217 MIMKFHSHYKKLD----TGFLSRIPSGKFGLKKRE 247
>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3
SV=2
Length = 244
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 147/239 (61%), Gaps = 35/239 (14%)
Query: 36 DKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFEL 95
+KP S + ++R+FGRE+PIH VLG GKPAD+ LWR+KK++ G+L T +W+LF
Sbjct: 39 EKPDSPVPINAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGF 98
Query: 96 LEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINR 155
L+T +C SIL L + FLWSNA +NKSP + + +PEK +L+ ASA+ +E+N
Sbjct: 99 GGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNC 155
Query: 156 ALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVF 215
A A LR IA RD+K F+ + GLWL+S++GNW +F++L YI
Sbjct: 156 AFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYI------------------ 197
Query: 216 LLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKV 274
FVL+HTVP++YEKYED+ID EKA IE+KK Y VF+ K L K+
Sbjct: 198 --------------CFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSKI 242
>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2
SV=1
Length = 225
Score = 164 bits (416), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 136/258 (52%), Gaps = 42/258 (16%)
Query: 29 SSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATA 88
SSSDS+D++ K +LF R++ IH + G GK ADI LWR KI+A ++ G +
Sbjct: 7 SSSDSEDERTIH------KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSI 60
Query: 89 MWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASA 148
+W L E++EY+ ITL+CH S+ S+ F+WS AS F+N P IP V L E + A +
Sbjct: 61 LWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARS 120
Query: 149 LRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAY 208
N+ L L ++A GRD F L+++SI+G + NFV L +IG
Sbjct: 121 FHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIG---------- 170
Query: 209 FLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDE 268
FV + T+PV+YE YED +D+ K ++KK Y +
Sbjct: 171 ----------------------FVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLY----K 204
Query: 269 KVLKKVLSRIPKGALKKK 286
KV VLS+IP+G +K K
Sbjct: 205 KVDTNVLSKIPRGTVKNK 222
>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2
SV=1
Length = 201
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 122/234 (52%), Gaps = 39/234 (16%)
Query: 55 EKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAV 114
E+ +H + G AD+ +W+N++ +LG T +W LFE Y V + +LS+ +
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 115 LFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG 174
LFLW+ ++ N+ P++P + + E+FV A A+R IN LAV REI GR+ K+
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 175 VIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLL 234
V LW +S VGN+ NF+T+ Y+G SL+
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLL------------------------------ 151
Query: 235 HTVPVIYEKYEDKIDSFGEKATIE---IKKQYAVFDEKVLKKVLSRIPKGALKK 285
+P +YE+Y+D ID EK ++ I+ QY DE++L+K++++ P +KK
Sbjct: 152 --IPFLYERYQDLID---EKLSLTHRVIQTQYRKIDERLLQKIIAK-PTNKIKK 199
>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2
SV=1
Length = 226
Score = 117 bits (293), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 32/246 (13%)
Query: 29 SSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATA 88
S SD D D + S +RL GR+ +H +G GK AD+ LWR + +S GV+ +T
Sbjct: 3 SLSDIDGDFDGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTV 62
Query: 89 MWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASA 148
W++FE +++ + ++ + + F+ + S F N+ +P + L E+ V A++
Sbjct: 63 AWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAAS 122
Query: 149 LRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAY 208
R ++N L + ++ G D + F V+ LWLLS +G++ + TL YIG
Sbjct: 123 FRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGT--------- 173
Query: 209 FLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDE 268
+L T+P +Y KY+ K+D + Y + DE
Sbjct: 174 -----------------------ILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDE 210
Query: 269 KVLKKV 274
V+ ++
Sbjct: 211 NVISRL 216
>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2
SV=2
Length = 215
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 48/234 (20%)
Query: 58 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFL 117
++H LG G+ ADI W+NKK S +LG T +W LFE++EY IT +C I +L + + +
Sbjct: 22 LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81
Query: 118 WS--NASTFINKSPPEIPVVTLPEKFVLEFASALRY---EINRALAVLREIASGRDLKKF 172
WS +S I PP I + + E S R+ +IN + L +I+SG+D +
Sbjct: 82 WSYIGSSQLIQSKPPSINDLRISE-------SNWRFLFNKINWFIIKLYDISSGKDFRLL 134
Query: 173 LGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFV 232
+ LW+LS+VGN+ + +TL YI VFV
Sbjct: 135 FLAVVSLWILSVVGNYFSSLTLLYI--------------------------------VFV 162
Query: 233 LLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
L T+P++YE+YE+++ K+ ++KK F+ KV+ K IPK K +
Sbjct: 163 GLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNSKVINK----IPKAQAKTR 212
>sp|Q9LT71|RTNLK_ARATH Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2
SV=1
Length = 200
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 32/191 (16%)
Query: 59 HHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLW 118
H LGAG AD+ LWRN+ + +L +T W LFE Y+L++ V ++ +L +A+ FLW
Sbjct: 14 HQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLW 73
Query: 119 SNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
+ ++T +N+ P +P + +PE+F + A LR IN L++ +I R+ + L V
Sbjct: 74 AKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLV 133
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
LW +S VG N +TL YIG SL + P
Sbjct: 134 LWAISYVGTLINSLTLVYIGVLLSL--------------------------------SFP 161
Query: 239 VIYEKYEDKID 249
++YEKY+D ID
Sbjct: 162 IVYEKYQDHID 172
>sp|Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2
SV=1
Length = 203
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 32/199 (16%)
Query: 50 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI 109
+LF R++ IH +LG G AD+ LWR K +S G++ A W++FE Y + TL+ + +
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 110 LSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDL 169
L L++LFLWS +++ +N+ P +P + E E + LR +N+ L V +IA RD
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 170 KKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFET 229
+ + V L+LLS++G+ +F TL + T
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCH--------------------------------T 154
Query: 230 VFVLLHTVPVIYEKYEDKI 248
+++ TVP YE+YED I
Sbjct: 155 SVLVVMTVPAFYERYEDYI 173
>sp|O64837|RTNLM_ARATH Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2
SV=1
Length = 206
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 32/204 (15%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKS 128
DI+LWR KK++ L +T+ W+L + IT+V I I ++++FLW + ++K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 129 PPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNW 188
PE+ + + E+FV+E + R + + + + + + F + G W+LS +GN
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 189 CNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKI 248
+F T +IG V+ TVP ++E+Y D+I
Sbjct: 138 LDFHTCLFIG--------------------------------LVMGLTVPKLWEEYGDQI 165
Query: 249 DSFGEKATIEIKKQYAVFDEKVLK 272
+ K Y EK+L+
Sbjct: 166 QKHLGSLKDKSKGAYNTTHEKILE 189
>sp|Q9ZU43|RTNLO_ARATH Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2
SV=2
Length = 191
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 42/225 (18%)
Query: 58 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFL 117
+ +LG G AD+ LW++K S L AT W L E +E L+ L+C I +L + +LFL
Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFL 63
Query: 118 WSN-ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVI 176
W+ F + PP + P+ + AL + L +L EIA G+D K FL I
Sbjct: 64 WAKFGEVFFTRRPPTPEELNQPDSPL----KALFSMMEGHLLMLYEIAYGKDNKTFLKTI 119
Query: 177 AGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHT 236
+ ++ +G++ + +T+ YI CL V T
Sbjct: 120 LYVAIIYNIGSYISLLTILYI---------------------CL-----------VCSMT 147
Query: 237 VPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKG 281
+PV+Y ++++ IDSF K + E VF K+V+S+IP+
Sbjct: 148 IPVVYMQFQELIDSFMGKVSEEKNNLLEVF-----KQVVSKIPRA 187
>sp|Q9ES97|RTN3_MOUSE Reticulon-3 OS=Mus musculus GN=Rtn3 PE=1 SV=2
Length = 964
Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 52/229 (22%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 778 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A +N+AL ++ + DL L +
Sbjct: 836 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 895
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+WL++ VG N +TL + + +L+ +VP
Sbjct: 896 MWLMTYVGAVFNGITLLILAE--------------------------------LLVFSVP 923
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD 287
++YEKY+ +ID + A + K +++K+ +++P A KK +
Sbjct: 924 IVYEKYKTQIDHYVGIARDQTK--------SIVEKIQAKLPGIAKKKAE 964
>sp|Q6RJR6|RTN3_RAT Reticulon-3 OS=Rattus norvegicus GN=Rtn3 PE=1 SV=1
Length = 940
Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 52/229 (22%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 754 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A +N+AL ++ + DL L +
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+WL++ VG N +TL + + +L+ +VP
Sbjct: 872 MWLMTYVGAVFNGITLLILAE--------------------------------LLVFSVP 899
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD 287
++YEKY+ +ID + A + K +++K+ +++P A KK +
Sbjct: 900 IVYEKYKTQIDHYVGIARDQTK--------SIVEKIQAKLPGIAKKKAE 940
>sp|Q68EW1|RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis GN=rtn3-b PE=2 SV=1
Length = 214
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 55/230 (23%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K S V GG M +L L + +I+++ ++ S+LS+ + F ++ + +
Sbjct: 28 DLLYWRDVKQSGMVFGGT--MVLLLSLAAFSIISVISYLVLSLLSVTISFRVYKSVLQAV 85
Query: 126 NKSPPEIPVVTLPEK--------FVLEFASALRYEINRALAVLREIASGRDLKKFLGVIA 177
K+ P L EK F +S+L + +N AL + + DL L +
Sbjct: 86 QKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAH-VNHALKSIVRLFLVEDLVDSLKLAL 144
Query: 178 GLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTV 237
+WL++ +G N +TL +G VL+A+ T
Sbjct: 145 LMWLMTYIGAVFNGITLLILG-----VLLAF---------------------------TT 172
Query: 238 PVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD 287
P++YEKY+ +ID + ++K + +K+ +++P GALKKK
Sbjct: 173 PLVYEKYKVQIDHYVSLVHSQVK--------SITEKIQAKLP-GALKKKS 213
>sp|Q5RBL9|RTN3_PONAB Reticulon-3 OS=Pongo abelii GN=RTN3 PE=2 SV=1
Length = 236
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 52/229 (22%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 50 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 107
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 108 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 167
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+WL++ VG N +TL + + +L+ +VP
Sbjct: 168 MWLMTYVGAVFNGITLLILAE--------------------------------LLIFSVP 195
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD 287
++YEKY+ +ID + A + K +++K+ +++P A KK +
Sbjct: 196 IVYEKYKTQIDHYVGIARDQTK--------SIVEKIQAKLPGIAKKKAE 236
>sp|Q28D16|RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis GN=rtn3 PE=2 SV=1
Length = 213
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 53/229 (23%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLF---LWSNASTFI 125
D+ WR+ K S V GG M +L L + +I+++ ++ + LAV ++ + +
Sbjct: 27 DLLYWRDVKQSGMVFGGT--MVLLLSLAAFSIISVISYLVLSLLAVTISYRVYKSVLQAV 84
Query: 126 NKSPPEIPVVTLPEKFVL----EFASALRYE---INRALAVLREIASGRDLKKFLGVIAG 178
K+ P L EK + F AL +N AL + + DL L +
Sbjct: 85 QKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAHVNHALKYIVRLFLVEDLVDSLKLALL 144
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+WL++ VG N +TL +G VL+A+ T P
Sbjct: 145 MWLMTYVGAVFNGITLLILG-----VLLAF---------------------------TAP 172
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD 287
++YEKY+ +ID + +K + +K+ +++P GALKKK
Sbjct: 173 IVYEKYKVQIDHYVSLVHSHVK--------SITEKIQAKLP-GALKKKS 212
>sp|Q08D83|RTN3_BOVIN Reticulon-3 OS=Bos taurus GN=RTN3 PE=2 SV=1
Length = 256
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 52/229 (22%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 70 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 127
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 128 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 187
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+WL++ VG N +TL + + +L+ ++P
Sbjct: 188 MWLMTYVGAVFNGITLLILAE--------------------------------LLVFSIP 215
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD 287
++YEKY+ +ID + A + K +++K+ +++P A KK +
Sbjct: 216 IVYEKYKTQIDHYVGIARDQTK--------SIVEKIQAKLPGIAKKKAE 256
>sp|Q5J6M8|RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis GN=rtn3-a PE=2 SV=2
Length = 214
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 53/229 (23%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K S V GG M +L L + +I+++ ++ S+L++ + + ++ + +
Sbjct: 28 DLLYWRDVKQSGMVFGGT--MVLLLSLAAFSIISVISYLVLSLLTVTISYRVYKSVLQAV 85
Query: 126 NKSPPEIPVVTLPEKFVL----EFASALRYE---INRALAVLREIASGRDLKKFLGVIAG 178
K+ P L EK + F AL +N AL + + DL L +
Sbjct: 86 QKTDEGHPFKPLLEKDITLSSDSFQKALTASLAHVNHALKYIVRLFLVDDLVDSLKLALL 145
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+WL++ VG N +TL +G VL+ + T P
Sbjct: 146 MWLMTYVGAVFNGITLLILG-----VLLTF---------------------------TAP 173
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD 287
++YEKY+ +ID + ++K + +K+ +++P GALKKK
Sbjct: 174 IVYEKYKVQIDHYVSLVHSQVK--------SITEKIQAKLP-GALKKKS 213
>sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2
Length = 1032
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 53/228 (23%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 846 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 904 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 963
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+WL++ VG N +TL + + +L+ +VP
Sbjct: 964 MWLMTYVGAVFNGITLLILAE--------------------------------LLIFSVP 991
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
++YEKY+ +ID + A + K +++K+ +++P G KKK
Sbjct: 992 IVYEKYKTQIDHYVGIARDQTK--------SIVEKIQAKLP-GIAKKK 1030
>sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2
Length = 561
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 55 EKPIHHVLGAGKPADIFLWRNKK---ISAGVLGGATAMWVLF--ELLEYHLITLVCHISI 109
+ +LG GK ADI LWRN+K +S VL W F L+ ++
Sbjct: 367 QSTADQLLGCGKVADILLWRNEKKTFVSFLVL-NLFYYWFFFSGNTFTSSAAQLLFIFAV 425
Query: 110 LSLAVLFLWSNASTF-INKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRD 168
V F+ S F +NK PP + E V + +S + N+ + + ++SG D
Sbjct: 426 ALYGVSFVPSKIFGFQVNKIPPW--RFEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGD 483
Query: 169 LKKFLGVIAGLWLLSIV 185
KF + L+LL ++
Sbjct: 484 WIKFFKIAGSLYLLKLI 500
>sp|Q661A3|DNAK_BORGA Chaperone protein DnaK OS=Borrelia garinii (strain PBi) GN=dnaK
PE=3 SV=1
Length = 635
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 128 SPPEIPVVTLPEKFVLEFASA-LRYEINRALAVLREI--ASGRDLKKFLGVIAGLWLLSI 184
SPPEI TL + + E A A L ++ A+ + + R K G IAGL + I
Sbjct: 111 SPPEISAATLTK--MKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRI 168
Query: 185 VGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFE 228
V + I KKH ++ Y L F + L+L G FE
Sbjct: 169 VNEPTAAALAYGIEKKHEEIVAVYDLGGGTFDISILELGDGVFE 212
>sp|B7J282|DNAK_BORBZ Chaperone protein DnaK OS=Borrelia burgdorferi (strain ZS7) GN=dnaK
PE=2 SV=1
Length = 635
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 128 SPPEIPVVTLPEKFVLEFASA-LRYEINRALAVLREI--ASGRDLKKFLGVIAGLWLLSI 184
SPPEI TL + + E A A L ++ A+ + + R K G IAGL + I
Sbjct: 111 SPPEISAATLTK--MKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRI 168
Query: 185 VGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFE 228
V + I KKH ++ Y L F + L+L G FE
Sbjct: 169 VNEPTAAALAYGIEKKHEEIVAVYDLGGGTFDISILELGDGVFE 212
>sp|P0C922|DNAK_BORBU Chaperone protein DnaK OS=Borrelia burgdorferi (strain ATCC 35210 /
B31 / CIP 102532 / DSM 4680) GN=dnaK PE=2 SV=1
Length = 635
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 128 SPPEIPVVTLPEKFVLEFASA-LRYEINRALAVLREI--ASGRDLKKFLGVIAGLWLLSI 184
SPPEI TL + + E A A L ++ A+ + + R K G IAGL + I
Sbjct: 111 SPPEISAATLTK--MKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRI 168
Query: 185 VGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFE 228
V + I KKH ++ Y L F + L+L G FE
Sbjct: 169 VNEPTAAALAYGIEKKHEEIVAVYDLGGGTFDISILELGDGVFE 212
>sp|Q0SMZ0|DNAK_BORAP Chaperone protein DnaK OS=Borrelia afzelii (strain PKo) GN=dnaK
PE=3 SV=1
Length = 635
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 128 SPPEIPVVTLPEKFVLEFASA-LRYEINRALAVLREI--ASGRDLKKFLGVIAGLWLLSI 184
SPPEI TL + + E A A L ++ A+ + + R K G IAGL + I
Sbjct: 111 SPPEISAATLTK--MKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRI 168
Query: 185 VGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFE 228
V + I KKH ++ Y L F + L+L G FE
Sbjct: 169 VNEPTAAALAYGIEKKHEEIVAVYDLGGGTFDISILELGDGVFE 212
>sp|Q4A658|DNAK_MYCS5 Chaperone protein DnaK OS=Mycoplasma synoviae (strain 53) GN=dnaK
PE=3 SV=1
Length = 596
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 167 RDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGS 226
R+ K G IAGL +L I+ F + K ++ ++ Y L F + LDL G+
Sbjct: 127 REATKNAGRIAGLEVLRIINEPTAAALAFGLDKNKAMKVLVYDLGGGTFDVSVLDLEDGT 186
Query: 227 FE 228
FE
Sbjct: 187 FE 188
>sp|Q99P72|RTN4_MOUSE Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2
Length = 1162
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 54/228 (23%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 977 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1034
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1035 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1094
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+W+ + VG N +TL + + L ++P
Sbjct: 1095 MWVFTYVGALFNGLTLLILA--------------------------------LISLFSIP 1122
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
VIYE+++ +ID + A +K A K+ ++IP LK+K
Sbjct: 1123 VIYERHQAQIDHYLGLANKSVKDAMA--------KIQAKIP--GLKRK 1160
>sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2
Length = 1192
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 97/228 (42%), Gaps = 54/228 (23%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 1007 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1064
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1065 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1124
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+W+ + VG N +TL + + L +VP
Sbjct: 1125 MWVFTYVGALFNGLTLLILA--------------------------------LISLFSVP 1152
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
VIYE+++ +ID + A +K A K+ ++IP LK+K
Sbjct: 1153 VIYERHQAQIDHYLGLANKNVKDAMA--------KIQAKIP--GLKRK 1190
>sp|B5RM75|DNAK_BORDL Chaperone protein DnaK OS=Borrelia duttonii (strain Ly) GN=dnaK
PE=3 SV=1
Length = 632
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 128 SPPEIPVVTLPEKFVLEFASA-LRYEINRALAVLREI--ASGRDLKKFLGVIAGLWLLSI 184
SPPEI TL + + E A A L ++ A+ + + R K G IAGL + I
Sbjct: 111 SPPEISAATLTK--MKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRI 168
Query: 185 VGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFE 228
V + I KKH ++ Y L F + L+L G FE
Sbjct: 169 VNEPTAAALAYGIEKKHEEIVAVYDLGGGTFDISILELGDGVFE 212
>sp|B5RPM1|DNAK_BORRA Chaperone protein DnaK OS=Borrelia recurrentis (strain A1) GN=dnaK
PE=3 SV=1
Length = 632
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 128 SPPEIPVVTLPEKFVLEFASA-LRYEINRALAVLREI--ASGRDLKKFLGVIAGLWLLSI 184
SPPEI TL + + E A A L ++ A+ + + R K G IAGL + I
Sbjct: 111 SPPEISAATLTK--MKETAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRI 168
Query: 185 VGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFE 228
V + I KKH ++ Y L F + L+L G FE
Sbjct: 169 VNEPTAAALAYGIEKKHEEIVAVYDLGGGTFDISILELGDGVFE 212
>sp|Q9JK11|RTN4_RAT Reticulon-4 OS=Rattus norvegicus GN=Rtn4 PE=1 SV=1
Length = 1163
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 54/228 (23%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 978 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1036 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1095
Query: 179 LWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVP 238
+W+ + VG N +TL + + L ++P
Sbjct: 1096 MWVFTYVGALFNGLTLLILA--------------------------------LISLFSIP 1123
Query: 239 VIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 286
VIYE+++ +ID + A +K A K+ ++IP LK+K
Sbjct: 1124 VIYERHQVQIDHYLGLANKSVKDAMA--------KIQAKIP--GLKRK 1161
>sp|Q36445|CYB_MYCVI Cytochrome b OS=Mycena viridimarginata GN=COB PE=2 SV=1
Length = 389
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 100 LITLVCHISILSLAVLF---LWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRA 156
L+T+ +LS+ V F L ++ +I +P P +PE ++L F + LR N+
Sbjct: 230 LVTIFAFFLVLSIIVFFYPNLMGHSDNYIPANPMVTPSSIVPEWYLLPFYAILRSIPNKL 289
Query: 157 LAVLREIASGRDL-------------KKFLGVIAGLWLLSIVGNWCNFVTLFYIGKKHS 202
L VL S L K L I ++ V CNF+TL +G H+
Sbjct: 290 LGVLAMFGSLLILLIMPFVDFSRTRGNKTLNPINMVFFTIFV---CNFITLGLVGANHA 345
>sp|Q16799|RTN1_HUMAN Reticulon-1 OS=Homo sapiens GN=RTN1 PE=1 SV=1
Length = 776
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+TL ++ + ++ L++ +N L LR + +DL L +WLL+ VG N +TL
Sbjct: 665 ITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTL 724
Query: 195 FYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSF 251
LMA V + T+PV+Y K++ +ID +
Sbjct: 725 L---------LMA-----------------------VVSMFTLPVVYVKHQAQIDQY 749
>sp|O67035|Y880_AQUAE UPF0278 protein aq_880 OS=Aquifex aeolicus (strain VF5) GN=aq_880
PE=3 SV=1
Length = 192
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 117 LWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAV----LREIASGRDLKKF 172
LW+ + P +T+P F+ EF LRY IN+ L + RE + D+ K
Sbjct: 61 LWAEFEMVVKIRSPRRFQLTVPADFLYEFIEELRYRINKGLRIAEEHTREASGCEDVGKL 120
Query: 173 LG 174
+
Sbjct: 121 IA 122
>sp|Q5IS59|RTN1_PANTR Reticulon-1 OS=Pan troglodytes GN=RTN1 PE=2 SV=1
Length = 776
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+TL ++ + ++ L++ +N L LR + +DL L +WLL+ VG N +TL
Sbjct: 665 ITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTL 724
Query: 195 FYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSF 251
LMA V + T+PV+Y K++ +ID +
Sbjct: 725 L---------LMA-----------------------VVSMFTLPVVYVKHQAQIDQY 749
>sp|Q6IFY7|RTN1A_XENLA Reticulon-1-A OS=Xenopus laevis GN=rtn1-a PE=2 SV=1
Length = 207
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 85/196 (43%), Gaps = 44/196 (22%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLF---LWSNAS 122
+ D+ WR+ K + V G M LF L+++ +++++ ++++ +L+ ++ +
Sbjct: 20 QAIDLLYWRDIKQTGIVFGSVLLM--LFSLIQFSVVSVMAYLALAALSATISFRIYKSVL 77
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P ++L ++ + ++ L+ N LR + +DL L
Sbjct: 78 QAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKF 137
Query: 176 IAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLH 235
+WLL+ VG N +T L++MA V +
Sbjct: 138 AVLMWLLTYVGALFNGLT---------LLIMA-----------------------VVSMF 165
Query: 236 TVPVIYEKYEDKIDSF 251
++PV+Y+KY+ +ID +
Sbjct: 166 SLPVVYDKYQAQIDQY 181
>sp|Q8GWH5|RTNLT_ARATH Reticulon-like protein B22 OS=Arabidopsis thaliana GN=RTNLB22 PE=2
SV=1
Length = 164
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 92 LFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRY 151
L L I L+C ++IL L LF N S ++ P E + + + L
Sbjct: 28 LLSLFSDVFIVLLCSLAILGL--LFRQLNVSVPVD--PLEWQI---SQDTASNIVARLAN 80
Query: 152 EINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIG 198
+ A VLR A+G D + F+ V+ L+ LS +G + VT+ Y G
Sbjct: 81 TVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVTVAYAG 127
>sp|Q3SW35|ATP6_NITWN ATP synthase subunit a OS=Nitrobacter winogradskyi (strain Nb-255 /
ATCC 25391) GN=atpB PE=3 SV=1
Length = 247
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 129 PPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGR-DLKKFLGVIAGLWLLSIVGN 187
P IPVV LP +E S L ++ ++ + + +G LK F + L + IVG
Sbjct: 144 PSGIPVVILPLVVTIEVISFLSRPVSHSVRLFANMLAGHITLKVFASFVTMLGAMGIVGV 203
Query: 188 WCNFVTLFYIGKKHSLVLMAYFLKWIVF-LLKCL 220
+ + L + +L L+ FL+ VF +L C+
Sbjct: 204 FGAVLPLALVVALTALELLVAFLQAYVFTILTCI 237
>sp|A7MC64|RTN1_XENTR Reticulon-1 OS=Xenopus tropicalis GN=rtn1 PE=2 SV=2
Length = 764
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 88/200 (44%), Gaps = 44/200 (22%)
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLF---LW 118
L K ++ WR+ K + V G + + +LF L ++ +++++ ++++ +L+ ++
Sbjct: 573 LSKRKAIELLYWRDIKQTGIVFG--SVLLMLFSLTQFSVVSVIAYLALAALSATISFRIY 630
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
+ + K+ P ++L ++ + ++ L+ N + LR + +DL
Sbjct: 631 KSVLQAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVD 690
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVF 231
L +WLL+ VG N +T L++MA
Sbjct: 691 SLKFAVLMWLLTYVGALFNGLT---------LLIMA-----------------------V 718
Query: 232 VLLHTVPVIYEKYEDKIDSF 251
V + ++PV+Y+KY+ +ID +
Sbjct: 719 VSMFSLPVVYDKYQAQIDQY 738
>sp|Q1QRH8|ATP6_NITHX ATP synthase subunit a OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=atpB PE=3 SV=1
Length = 247
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 129 PPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGR-DLKKFLGVIAGLWLLSIVGN 187
P IP+V LP +E S L ++ ++ + + +G LK F + L + IVG
Sbjct: 144 PSGIPIVILPLVVAIEVISFLSRPVSHSVRLFANMLAGHITLKVFASFVTMLGAMGIVGV 203
Query: 188 WCNFVTLFYIGKKHSLVLMAYFLKWIVF-LLKCL 220
+ + L + +L L+ FL+ VF +L C+
Sbjct: 204 FGAVLPLALVVALTALELLVAFLQAYVFTILTCI 237
>sp|Q64548|RTN1_RAT Reticulon-1 OS=Rattus norvegicus GN=Rtn1 PE=2 SV=1
Length = 777
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 32/117 (27%)
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+TL ++ + ++ L+ +N L LR + +DL L +WLL+ VG N +TL
Sbjct: 666 ITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTL 725
Query: 195 FYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSF 251
LMA V + T+PV+Y K++ ++D +
Sbjct: 726 L---------LMA-----------------------VVSMFTLPVVYVKHQAQVDQY 750
>sp|Q8K0T0|RTN1_MOUSE Reticulon-1 OS=Mus musculus GN=Rtn1 PE=1 SV=1
Length = 780
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 32/117 (27%)
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+TL ++ + ++ L+ +N L LR + +DL L +WLL+ VG N +TL
Sbjct: 669 ITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTL 728
Query: 195 FYIGKKHSLVLMAYFLKWIVFLLKCLDLLYGSFETVFVLLHTVPVIYEKYEDKIDSF 251
LMA V + T+PV+Y K++ ++D +
Sbjct: 729 L---------LMA-----------------------VVSMFTLPVVYVKHQAQVDQY 753
>sp|Q4FPE9|ATP6_PELUB ATP synthase subunit a OS=Pelagibacter ubique (strain HTCC1062)
GN=atpB PE=3 SV=1
Length = 244
Score = 31.2 bits (69), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 129 PPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG--VIAGLWLLSIVG 186
P +P V LP V+E S L ++ ++ + + +G + K G VI+ L IVG
Sbjct: 147 PSGVPAVLLPLIVVIEIISYLSRPVSLSVRLFANMMAGHTMMKVFGGFVIS----LGIVG 202
Query: 187 NWCNFVTLFYIGKKHSLVLMAYFLKWIVFLLKCLDL 222
W F + +L+A+ ++ +L C+ L
Sbjct: 203 GWLPLS--FSVALTGLEILVAFLQAYVFAILTCIYL 236
>sp|P0C941|RTNLU_ARATH Reticulon-like protein B23 OS=Arabidopsis thaliana GN=RTNLB23 PE=2
SV=1
Length = 155
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 81 GVLGGATAMWVLFELLEYH-------LITLVCHISILSLAVLFLWSNASTFINKSPPEIP 133
G +G A + + L+ +H L++L+ + I+ L+ L + +N S P P
Sbjct: 2 GEMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDP 61
Query: 134 VV-TLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFV 192
+ + + + L + A +VLR A+G D + F+ V+ L+ L+ +G + V
Sbjct: 62 LEWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGV 121
Query: 193 TLFYIG 198
T+ Y G
Sbjct: 122 TIAYAG 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,362,223
Number of Sequences: 539616
Number of extensions: 4483233
Number of successful extensions: 13625
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 13536
Number of HSP's gapped (non-prelim): 97
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)