BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023142
(286 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P43333|RU2A_ARATH U2 small nuclear ribonucleoprotein A' OS=Arabidopsis thaliana
GN=At1g09760 PE=2 SV=2
Length = 249
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/243 (81%), Positives = 216/243 (88%), Gaps = 6/243 (2%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LTADLIWKSPHFFNAIKERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P+LNRLGTL+INNNRITRINPN+GEFLPKLH+LVLTNNRLVNLVEIDPL S+PKLQ+LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSL 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAKKESMKTLM 180
LDN+ITKK NYRLYVIHKLKSLRVLDF K+K KER EAASLF+S+E EEE KK S +
Sbjct: 121 LDNNITKKANYRLYVIHKLKSLRVLDFIKIKAKERAEAASLFSSKEAEEEVKKVSRE--- 177
Query: 181 PVEVPNVSEEEEQ-QTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPADLK 239
EV VSE E +TPKVVAPT EQI+AIKAAI+NSQT+EE+ARLE+ LK GQ+PA L
Sbjct: 178 --EVKKVSETAENPETPKVVAPTAEQILAIKAAIINSQTIEEIARLEQALKFGQVPAGLI 235
Query: 240 IPD 242
IPD
Sbjct: 236 IPD 238
>sp|Q4R8Y8|RU2A_MACFA U2 small nuclear ribonucleoprotein A' OS=Macaca fascicularis
GN=SNRPA1 PE=2 SV=1
Length = 255
Score = 221 bits (563), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 157/239 (65%), Gaps = 11/239 (4%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LTA+LI ++ + NA+++RELDLRG KI VIENLGAT DQFD ID SDNEI KL+
Sbjct: 1 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P L RL TL++NNNRI RI + + LP L L+LTNN LV L ++DPL SL L +LS+
Sbjct: 61 PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAK--KESMKT 178
L N +T K +YRLYVI+K+ +RVLDF+KVK KER EA +F + + AK KT
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT 180
Query: 179 LMP-VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPA 236
P +P K P+P + AIK AI N+ TL EV RL+ +L+SGQ+P
Sbjct: 181 FNPGAGLPT--------DKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPG 231
>sp|P09661|RU2A_HUMAN U2 small nuclear ribonucleoprotein A' OS=Homo sapiens GN=SNRPA1
PE=1 SV=2
Length = 255
Score = 221 bits (563), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 157/239 (65%), Gaps = 11/239 (4%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LTA+LI ++ + NA+++RELDLRG KI VIENLGAT DQFD ID SDNEI KL+
Sbjct: 1 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P L RL TL++NNNRI RI + + LP L L+LTNN LV L ++DPL SL L +LS+
Sbjct: 61 PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAK--KESMKT 178
L N +T K +YRLYVI+K+ +RVLDF+KVK KER EA +F + + AK KT
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT 180
Query: 179 LMP-VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPA 236
P +P K P+P + AIK AI N+ TL EV RL+ +L+SGQ+P
Sbjct: 181 FNPGAGLPT--------DKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPG 231
>sp|P57784|RU2A_MOUSE U2 small nuclear ribonucleoprotein A' OS=Mus musculus GN=Snrpa1
PE=1 SV=2
Length = 255
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 156/239 (65%), Gaps = 11/239 (4%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LTA+LI ++ + NA+++RELDLRG KI VIENLGAT DQFD ID SDNEI KL+
Sbjct: 1 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P L RL TL++NNNRI RI + + LP L L+LTNN LV L ++DPL SL L +LS+
Sbjct: 61 PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAK--KESMKT 178
L N +T K +YRLYVI+K+ +RVLDF+KVK KER EA +F + + AK KT
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT 180
Query: 179 LMP-VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPA 236
P +P K P+ + AIK AI N+ TL EV RL+ +L+SGQ+P
Sbjct: 181 FNPGAGLPT--------DKKKGGPSAGDVEAIKNAIANASTLAEVERLKGLLQSGQIPG 231
>sp|Q9V4Q8|RU2A_DROME Probable U2 small nuclear ribonucleoprotein A' OS=Drosophila
melanogaster GN=U2A PE=2 SV=1
Length = 265
Score = 194 bits (493), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 152/238 (63%), Gaps = 3/238 (1%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MV+LT +LI +S + N +ERELDLRG KI IENLGAT DQFDTIDLSDN++ KL+N+
Sbjct: 1 MVKLTPELINQSMQYINPCRERELDLRGYKIPQIENLGATLDQFDTIDLSDNDLRKLDNL 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
PHL RL L++NNNRI RI+ + E +P L +++LT N L L +++PL KL+ + L
Sbjct: 61 PHLPRLKCLLLNNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICL 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAKKESMKTLM 180
L N ++ KPNYR Y+ +K LR+LDF+K+K K+R A F +++ ++ K+ S K+ M
Sbjct: 121 LINPVSTKPNYREYMAYKFPQLRLLDFRKIKQKDRQAAQEFFRTKQGKDVLKEISRKSKM 180
Query: 181 P---VEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLP 235
+ + + P+ + I+ AI + +L EV RL ++L+SGQLP
Sbjct: 181 SAAAAIAAEAGNGKGRGSEGGRLANPQDMQRIREAIKRASSLAEVERLSQILQSGQLP 238
>sp|Q9BLB6|RU2A_CAEEL Probable U2 small nuclear ribonucleoprotein A' OS=Caenorhabditis
elegans GN=sap-1 PE=1 SV=1
Length = 253
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 150/237 (63%), Gaps = 6/237 (2%)
Query: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
MVRLT +L + P F N++ RE++LRG KI VIEN+G T DQFD IDL+DN+I KL+N
Sbjct: 1 MVRLTTELFAERPQFVNSVNMREINLRGQKIPVIENMGVTRDQFDVIDLTDNDIRKLDNF 60
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
P +RL TL ++NNRI I P+I LP L TL LTNN + L +I+PL KL++++
Sbjct: 61 PTFSRLNTLYLHNNRINYIAPDIATKLPNLKTLALTNNNICELGDIEPLAECKKLEYVTF 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLF--ASEEMEEEAKKESMKT 178
+ N IT K NYR+Y+I+KL ++RV+DF +V+ ER A +F S + +A ++S+ T
Sbjct: 121 IGNPITHKDNYRMYMIYKLPTVRVIDFNRVRLTEREAAKKMFKGKSGKKARDAIQKSVHT 180
Query: 179 LMPVEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLP 235
P E+ E E + T E IK AI N+++L EV L+ +L SG++P
Sbjct: 181 EDPSEI----EPNENSSGGGARLTDEDREKIKEAIKNAKSLSEVNYLQSILASGKVP 233
>sp|Q9USX8|RU2A_SCHPO U2 small nuclear ribonucleoprotein A' OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lea1 PE=1 SV=1
Length = 239
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 138/238 (57%), Gaps = 4/238 (1%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RL A+ + + P F + +KE ELDLR +I +IENLG D D ID +DN+I L N P
Sbjct: 1 MRLNAEFLSQVPSFISPLKETELDLRWYQIPIIENLGVLRDVHDAIDFTDNDIRYLGNFP 60
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
+ RL TL+ NNRIT I P+IG+ LP L TL L N L + ++DPL S P+L LS +
Sbjct: 61 RMKRLQTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEIADLDPLASCPQLTNLSCI 120
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAKKESM--KTL 179
DN + +K YRLY+I ++ SL +LDF++V+ ER+ A +F + E M K+
Sbjct: 121 DNPVAQKQYYRLYLIWRIPSLHILDFERVRRNERLRAEEVFGQIQNPTEIASSIMGVKSR 180
Query: 180 MPVEVPNVSEEEEQQTPKVVAP--TPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLP 235
+ V E +P TPE+ IK AI N+ ++ E+ RLE +L G++P
Sbjct: 181 VFDLAALVQSHPEANSPITTGYTLTPEEREKIKEAIKNASSIAEINRLEAMLLEGKIP 238
>sp|Q4WV66|RU2A_ASPFU U2 small nuclear ribonucleoprotein A' OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=lea1 PE=3 SV=1
Length = 253
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 148/256 (57%), Gaps = 12/256 (4%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLT +LI S + N +K+RELDLRG+KI IENLG +DQ D ID +DN+I L N P
Sbjct: 1 MRLTVELIQNSLSYINPLKDRELDLRGHKIPTIENLGIAKDQ-DAIDFTDNDISSLGNFP 59
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
RL TL++ NR+ I P I +P L TLVLT N + L ++DPL +L +L L LL
Sbjct: 60 FFPRLHTLLLARNRVKHIQPTIASTIPNLTTLVLTANNMAELADLDPLRNLTRLTHLVLL 119
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFAS-EEMEEEAKKESMKTLM 180
+N +T+K +YR +VI ++ S+R LD++KVK+ ER +A LF + EE A K
Sbjct: 120 ENPVTRKEHYRYWVIWRIPSVRFLDYQKVKDAERAKAKELFGTAEEPTALASKIMGIKSR 179
Query: 181 PVEVPNVSEEEEQQTPKV-VAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPADLK 239
+VP+ E V V T ++ ++ I +++L+E+ RLEK L G++P
Sbjct: 180 TFDVPSGGAERAPADKAVRVKLTEKERKRVEKMIREARSLQEITRLEKELNEGRIPG--- 236
Query: 240 IPDYDSGSKDVKENDE 255
G+ D E+ E
Sbjct: 237 ------GALDAGEDSE 246
>sp|Q4P5F9|RU2A_USTMA U2 small nuclear ribonucleoprotein A' OS=Ustilago maydis (strain
521 / FGSC 9021) GN=LEA1 PE=3 SV=1
Length = 246
Score = 150 bits (379), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 149/243 (61%), Gaps = 11/243 (4%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
++LT +L+ +S N +++RELDLRG KI IENLG T DQ D IDL+DN+I L N P
Sbjct: 1 MKLTPELLSRSSSSINTLRDRELDLRGLKIPAIENLGVTRDQNDAIDLTDNDIRYLGNFP 60
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
L +L TL + NN I+RI+P IG LP LH+L LTNN + +L E+ L+ +L++L L+
Sbjct: 61 LLQQLKTLQLANNLISRIDPRIGHSLPALHSLNLTNNCISDLSELVHLSKCRRLEYLCLM 120
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEA-----KKESM 176
+++ YR +VI KL +RVLD++++K+KER A L +E+ A K+
Sbjct: 121 GTPASREAQYREFVIWKLPQVRVLDYQRIKDKERARAKDLMETEDGRPTALAANILKKLG 180
Query: 177 KTLMPVEVPNVSEEEEQQTPKVVAPTPEQII------AIKAAIVNSQTLEEVARLEKVLK 230
+ M V+V + +++ P + + +++ AI+ AI +S++LEE+ +LE+ LK
Sbjct: 181 ASAMDVDVDVMVGKQKTFEPGRLNGSSRRLLTAEERKAIEDAIESSESLEEIRKLEEQLK 240
Query: 231 SGQ 233
G
Sbjct: 241 MGH 243
>sp|Q7S9P4|RU2A_NEUCR U2 small nuclear ribonucleoprotein A' OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=lea-1 PE=3 SV=1
Length = 252
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 133/250 (53%), Gaps = 7/250 (2%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLTADLI S + N +KERE+DLRG++I IENLG D ID +DN+I L N P
Sbjct: 1 MRLTADLINNSLSYLNPLKEREIDLRGHRIPAIENLGVAGPH-DAIDFTDNDIQVLGNFP 59
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
R+ TL++ NRI +I + P L LVL +N + L +++ L P+L L L
Sbjct: 60 LSPRIRTLLLARNRIAQIQSTLPNATPNLKNLVLASNNIGELADLEVLGRFPRLTHLVLT 119
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASE----EMEEEAKKESMK 177
DN +TKK NYR +V+ +R LD+ KVK+ ER +A LF + E+ + K K
Sbjct: 120 DNPVTKKENYRYWVLWLCPQVRFLDYVKVKDAERQKAKELFGTADEPTELAKTIKGIKSK 179
Query: 178 TLMPVEVPNVSEEEEQQTPKV--VAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLP 235
T + K+ + T ++ ++ I + +LEE+ RLEK L G+LP
Sbjct: 180 TFDVGASSANGAAGSGPSSKLSRLKLTEKEKKKLQDLIKKADSLEEIIRLEKALNEGRLP 239
Query: 236 ADLKIPDYDS 245
+ D D+
Sbjct: 240 PGIIAEDDDA 249
>sp|Q5BGW9|RU2A_EMENI U2 small nuclear ribonucleoprotein A' OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=lea1 PE=3 SV=1
Length = 230
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 132/247 (53%), Gaps = 44/247 (17%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLT +LI S + N +K+RELDLR DN+I L N P
Sbjct: 1 MRLTVELIQNSLSYINPLKDRELDLR-----------------------DNDISSLGNFP 37
Query: 62 HLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLL 121
RL L++ NR+ +I P++ +P L TLVLT N + L ++DPL +L KL L LL
Sbjct: 38 FFPRLRMLLLARNRVRQIQPSLANSIPGLTTLVLTANNIAELADLDPLRNLTKLTHLVLL 97
Query: 122 DNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLF--ASEEMEEEAKKESMKTL 179
+N +T+K YRL++I ++ S+R LD++KVK+ ER +AA LF A+E +K +K+
Sbjct: 98 ENPVTRKEYYRLWIIWRIPSVRFLDYQKVKDAERAKAAELFGTATEPTALASKILGVKS- 156
Query: 180 MPVEVPNVSEEEEQQTPKVVAPTPEQIIAIKAA----------IVNSQTLEEVARLEKVL 229
++P+ ++ P PE+ + +K I +++L+E+ RLE+ L
Sbjct: 157 RTFDIPSGGAADQ--------PPPEKRLRVKLTDSERKRIEKMIREAKSLQEITRLEREL 208
Query: 230 KSGQLPA 236
G++P
Sbjct: 209 NEGRIPG 215
>sp|Q6C417|RU2A_YARLI U2 small nuclear ribonucleoprotein A' OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=LEA1 PE=3 SV=1
Length = 230
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RL AD I + + N I +REL+LRG +I VIENLG TED + ++DLSDNEI + P
Sbjct: 30 MRLNADTILNAQSYINPIGDRELNLRGLQIPVIENLGVTEDHYTSLDLSDNEIRVMGGFP 89
Query: 62 HLNRLGTLIINNNRITRIN--PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLS 119
L L TL+++ NRIT+IN NI KL TLVLT N + L ++ L SL L ++
Sbjct: 90 RLETLRTLLLSKNRITQINDVKNIA----KLETLVLTQNGIATLGALESLKSLVNLTAIT 145
Query: 120 LLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASL 161
L N + P YR Y+I L SLR+LDF++V KER EA ++
Sbjct: 146 LDGNPVQHVPRYRSYMISILPSLRMLDFQRVTQKERDEAEAM 187
>sp|Q6BT60|RU2A_DEBHA U2 small nuclear ribonucleoprotein A' OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=LEA1 PE=3 SV=2
Length = 238
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLT+ ++ +P N K+ L LR KI +ENLG T+D ++ IDL+DNE+++L N P
Sbjct: 1 MRLTSQVLSDAPTIINPEKQVTLSLRSLKIPYLENLGITKDTYEVIDLTDNELIELSNFP 60
Query: 62 HLNRLGTLIINNNRITRINPN-IGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
L L L++ NN IT IN + + LP L ++ +N + ++ L L ++
Sbjct: 61 RLKNLKVLLVGNNNITGINDDKLPNNLPHLQSISFIHNNISKFSDVRILCRFKNLSNITF 120
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFA 163
++N IT PNYR +++ + +L+VLDF KVK KE ++A LF
Sbjct: 121 IENPITDSPNYRYFIVWLIPTLKVLDFSKVKQKELVKAKELFG 163
>sp|Q5A449|RU2A_CANAL U2 small nuclear ribonucleoprotein A' OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=LEA1 PE=3 SV=1
Length = 233
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 123/235 (52%), Gaps = 8/235 (3%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMP 61
+RLTA +I ++P N + L LR +I +ENL T++++ IDLS+N+++ L N+P
Sbjct: 1 MRLTAQVINEAPEILNPEGKLTLLLRDLQITELENLAITQNKYQVIDLSNNDLISLGNIP 60
Query: 62 -HLNRLGTLIINNNRITRINPNIGEFLPK---LHTLVLTNNRLVNLVEIDPLTSLPKLQF 117
N L L+++NN I+ I+ E P + ++ L NN + + PKL+
Sbjct: 61 KRFNNLQCLLLSNNNISYID---DESFPSDNHITSITLFNNNIYQF-QKSFKDKFPKLET 116
Query: 118 LSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAKKESMK 177
L LL N IT+ NYR ++I + SL+VLDFKKVK ER + +F + E + + M
Sbjct: 117 LILLGNPITEMENYRYFIIWLIPSLKVLDFKKVKQAERKTSEDMFGTNRDEFNSLAQQMF 176
Query: 178 TLMPVEVPNVSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSG 232
E+ + + Q V T E+ + + + ++EE+ R+E LK G
Sbjct: 177 KNENTEIKLDGKSDRQVKNFVKKMTDEERQQLLKKLETATSIEEIERIENDLKEG 231
>sp|Q7ZV84|DAAF1_DANRE Dynein assembly factor 1, axonemal OS=Danio rerio GN=dnaaf1 PE=2
SV=2
Length = 555
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 6/163 (3%)
Query: 17 NAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRI 76
N + R L L N I +ENL + T+++S+N I +EN+ L+ L TL I++N +
Sbjct: 116 NQTELRCLFLHQNLIHTLENLEPLS-KLCTLNVSNNYIKVIENISSLSDLSTLQISHNTL 174
Query: 77 TRINPNIGEF--LPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRL 133
+ ++ E P + L L++NR+ + ++ L +P L+ L+L+ N + KK PNYR
Sbjct: 175 GNVC-DMEELSHCPSISVLDLSHNRISDPALVNILEKMPDLRVLNLMGNEVIKKIPNYRK 233
Query: 134 YVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAKKESM 176
+I +LK L LD + V K+R A +A+ +E E K+ M
Sbjct: 234 TLIVRLKQLTYLDDRPVFPKDRA-CAEAWAAGGLEGEQKEREM 275
>sp|Q8IW35|CEP97_HUMAN Centrosomal protein of 97 kDa OS=Homo sapiens GN=CEP97 PE=1 SV=1
Length = 865
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 13/149 (8%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRIT--RINP 81
L+L GN + +E + + +DLSDN I ++ ++ L L TL+++ N IT R+ P
Sbjct: 107 LNLAGNNLKAMEQINSC-TALQHLDLSDNNISQIGDLSKLVSLKTLLLHGNIITSLRMAP 165
Query: 82 NIGEFLPK-LHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDN-SITKKP-----NYRLY 134
+LP+ L L L N + +L EI L SL +L+ LS+++N + P +YR Y
Sbjct: 166 ---AYLPRSLAILSLAENEIRDLNEISFLASLTELEQLSIMNNPCVMATPSIPGFDYRPY 222
Query: 135 VIHKLKSLRVLDFKKVKNKERMEAASLFA 163
++ +LRVLD + KE ++A L++
Sbjct: 223 IVSWCLNLRVLDGYVISQKESLKAEWLYS 251
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 22/123 (17%)
Query: 40 TEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRI---------------NPNIG 84
E T+ L N+I+KLEN+ RL L + NNR+ R+ + +IG
Sbjct: 34 CEADIHTLILDKNQIIKLENLEKCKRLIQLSVANNRLVRMMGVAKLTLLRVLNLPHNSIG 93
Query: 85 --EFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSL 142
E L +L L N NL ++ + S LQ L L DN+I++ + + KL SL
Sbjct: 94 CVEGLKELVHLEWLNLAGNNLKAMEQINSCTALQHLDLSDNNISQIGD-----LSKLVSL 148
Query: 143 RVL 145
+ L
Sbjct: 149 KTL 151
>sp|Q08963|RU2A_YEAST U2 small nuclear ribonucleoprotein A' OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=LEA1 PE=1 SV=1
Length = 238
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 19/193 (9%)
Query: 47 IDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLP-KLHTLVLTNNRLVNLVE 105
+DL++N+++ + ++ + + TL++ N I ++ G LP + L L+NN + +
Sbjct: 57 LDLTNNDLIMIPDLSRRDDIHTLLLGRNNIVEVD---GRLLPMNVQNLTLSNNSIRRFED 113
Query: 106 IDPLTSLPK-LQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFAS 164
+ L P+ L+ L+L+ N + NYR +V+ + L LDF+ V +ER A S
Sbjct: 114 LQRLRRAPRTLKNLTLIGNQVCHLANYREHVLRLVPHLETLDFQNVTAEERKSAMSF--- 170
Query: 165 EEMEEEAKKESMKTLMPVEVP---NVSEEEEQQTPKVVAP--TPEQIIAIKAAIVNSQTL 219
++ TL PV N S ++ + +V T E+ +K + + +L
Sbjct: 171 ------PRQADGDTLGPVNTAIRDNGSRDKTMEIMNLVVSKMTVERRNELKKQLAEATSL 224
Query: 220 EEVARLEKVLKSG 232
EE+ARLEK+L G
Sbjct: 225 EEIARLEKLLSGG 237
>sp|Q755D2|RU2A_ASHGO U2 small nuclear ribonucleoprotein A' OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=LEA1 PE=3 SV=1
Length = 237
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 29/247 (11%)
Query: 2 VRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATED-------------QFDTID 48
++LT I ++P ++ + D+ +K+ ++ + G + + + +D
Sbjct: 1 MKLTPASILEAPVYYADHIHGKYDV--DKVVILRDCGYVSENEIMPQTLKLLPERTNIVD 58
Query: 49 LSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPK-LHTLVLTNNRLVNLVEID 107
++NE+ +L + H + + TL+++ NR+ R++ LP+ L L L NR ++
Sbjct: 59 FTNNELEELPPLGHNDTVHTLLLSRNRLGRLD---ASRLPRYLVNLNLAMNRFEKFEQLQ 115
Query: 108 PLTSLPK-LQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEE 166
L S PK L+ L+L N I K YR VI L VLD ++V+ ER A
Sbjct: 116 GLRSAPKTLKNLNLRGNVICHKEQYRETVIALCPQLAVLDGERVRQAERQAAP------- 168
Query: 167 MEEEAKKESMKTLMPVEVPNVSEEEEQQTPKVVAPTPEQIIA-IKAAIVNSQTLEEVARL 225
+ E + PV + SE+E Q VV + + IK + + TL E+ RL
Sbjct: 169 -QNEKTDTPTEGPQPVALQATSEKELQLMDHVVNKMDKDTLEDIKQQLAKATTLAEIERL 227
Query: 226 EKVLKSG 232
EK+L G
Sbjct: 228 EKLLSGG 234
>sp|Q9CZ62|CEP97_MOUSE Centrosomal protein of 97 kDa OS=Mus musculus GN=Cep97 PE=2 SV=1
Length = 856
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 13/149 (8%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRIT--RINP 81
L+L GN + +E + + +DLSDN I ++ ++ L L TL+++ N IT R+ P
Sbjct: 107 LNLAGNNLKTMEQVNSCT-ALQHLDLSDNNIPQIGDVSKLISLKTLLLHGNIITSLRMAP 165
Query: 82 NIGEFLPK-LHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDN-SITKKP-----NYRLY 134
+LP+ L L L N + +L EI L SL +L+ LS+++N + P +YR +
Sbjct: 166 ---AYLPRNLSILSLAENEIRDLNEISFLASLSELEQLSIMNNPCVMATPSIPGFDYRPF 222
Query: 135 VIHKLKSLRVLDFKKVKNKERMEAASLFA 163
++ +LRVLD + KE ++A L++
Sbjct: 223 IVSWCLNLRVLDGYVISQKESLKAEWLYS 251
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 25/132 (18%)
Query: 34 IENLGA---TEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRI----------- 79
++ LGA E T+ L N+I+KLEN+ +L L + NNR+ R+
Sbjct: 25 LQKLGANLPCEADVHTLILDKNQIIKLENLEKCKQLIQLSVANNRLVRMMGVAKLTQLRV 84
Query: 80 ----NPNIG--EFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRL 133
+ +IG E L L L N NL ++ + S LQ L L DN+I + +
Sbjct: 85 LNLPHNSIGCVEGLKDLVHLEWLNLAGNNLKTMEQVNSCTALQHLDLSDNNIPQ-----I 139
Query: 134 YVIHKLKSLRVL 145
+ KL SL+ L
Sbjct: 140 GDVSKLISLKTL 151
>sp|Q9NJE9|TILB_TRYBB Protein TILB homolog OS=Trypanosoma brucei brucei GN=lrrc6 PE=3
SV=1
Length = 383
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 1 MVRLTADLIWK-SPHFFNAIKE-RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLE 58
M R+T DL+ + + H + +E+ L I IE +G + + + L +N I ++E
Sbjct: 1 MGRITTDLLRRRAEHNEGCLSNLKEVALHQQDIERIELIGDACRELEILYLCNNYISRIE 60
Query: 59 NMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFL 118
+ HL L L + N IT I G L L LT N + ++ ++ L + L L
Sbjct: 61 GLQHLKYLKYLNLAVNNITYIEGLEG--CEALERLDLTLNFVADVTCVERLRANAFLDQL 118
Query: 119 SLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEA 158
L N TK YR YV+H L LR LD ++V ER+EA
Sbjct: 119 HLTGNPCTKVAGYRAYVVHALPQLRELDGEEVIKTERLEA 158
>sp|B6D5P6|DAAF1_PERCA Dynein assembly factor 1, axonemal OS=Peromyscus californicus
GN=Dnaaf1 PE=2 SV=1
Length = 622
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +NR+ +
Sbjct: 148 RCLFLQVNLLHKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRLETVAD 206
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++GE L +L L L++N L + + L S+P L+ L+L+ N +TK PNYR V +
Sbjct: 207 IQHLGECL-RLCVLDLSHNMLSDPEILSVLESMPCLRVLNLMGNPVTKHIPNYRRTVTVR 265
Query: 139 LKSLRVLDFKKVKNKERMEAASL----FASEEME 168
LK L LD + V K+R A + +A+E+ E
Sbjct: 266 LKQLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|Q9D5S7|LRGUK_MOUSE Leucine-rich repeat and guanylate kinase domain-containing protein
OS=Mus musculus GN=Lrguk PE=2 SV=1
Length = 820
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 17 NAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRI 76
N I L L GNKI I+ LG + LS+N I + + L L L +++N+I
Sbjct: 235 NCISLTHLSLAGNKITTIKGLGTLP--IKVLSLSNNMIETITGLEELKALQNLDLSHNQI 292
Query: 77 TRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVI 136
+ + L L + L +N++ L EI+ + +LP L+ L+LL N I KP Y +VI
Sbjct: 293 SSLQGLENHDL--LEVINLEDNKIKELSEIEYIENLPILRVLNLLRNPIQTKPEYWFFVI 350
Query: 137 HKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAKKESMKTLMPVEVPNVSEEE---EQ 193
+ L L LD +K+K +E++ FA + + + +++ M V ++S+ + +
Sbjct: 351 YMLLRLTELDQQKIKVEEKV-----FAVNKYDPPPEVVAVQDHMTHVVNSMSQPQRIWDS 405
Query: 194 QTPKVVAPTPEQIIAIKAAIVNSQTLEEVAR 224
P + AP P I+ AA + + R
Sbjct: 406 TLPSLDAPYPMLILTGPAACGKRELAHRLCR 436
>sp|A2AL36|CNTRL_MOUSE Centriolin OS=Mus musculus GN=Cntrl PE=2 SV=2
Length = 2334
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%)
Query: 47 IDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEI 106
++LS N+I K+E + ++ L L + N I I + L L L L N++ +L ++
Sbjct: 152 LNLSYNKISKIEGLENMCNLQKLNLAGNEIEHIPVWFAKKLKSLRVLNLKGNKISSLQDV 211
Query: 107 DPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEE 166
L L L L L+DN + P+Y ++I L+SL L+ + V ++R EA F+ EE
Sbjct: 212 SKLKPLQDLTSLVLIDNPVVALPHYLQFIIFHLRSLESLEGQPVTTQDRQEAFERFSLEE 271
Query: 167 MEEEAKKESMKTLMPVEVPN 186
+E K KT+ E+ N
Sbjct: 272 IERLEKDLEKKTVETEELKN 291
>sp|Q4R6X9|LRC48_MACFA Leucine-rich repeat-containing protein 48 OS=Macaca fascicularis
GN=LRRC48 PE=2 SV=1
Length = 523
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 22 RELDLRGNKIAVIENLGATED--QFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRI 79
R+L L N +IE +G E+ +DLS N I +E + L L L + NNRI++I
Sbjct: 68 RKLQLDNN---IIEKIGGLENLTHLVWLDLSFNNIETIEGLDTLVNLEDLSLFNNRISKI 124
Query: 80 NPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKL 139
+ + L KL L L NN++ N++ I L L+ LSL N I++ +Y++++ L
Sbjct: 125 DS--LDALVKLQVLSLGNNQIDNMMNIVYLRRFQCLRTLSLSGNPISEAEDYKMFICAYL 182
Query: 140 KSLRVLDFKKVKN--KERMEAASLFASEEM 167
L LDF+++ + KE EA ++ +E+
Sbjct: 183 PDLVYLDFRRIDDHTKELAEAKHQYSIDEL 212
>sp|Q9D9B4|CJ011_MOUSE Leucine-rich repeat-containing protein C10orf11 homolog OS=Mus
musculus PE=2 SV=1
Length = 229
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 82/186 (44%), Gaps = 44/186 (23%)
Query: 35 ENLGATEDQF-DTIDLSDNEIVKLENMPHLNRLGTLIINNNRITR--INPNIGEFLPKLH 91
E+LG F +DLS N + LE + L LI++NN + + P LP LH
Sbjct: 23 EHLGRDFGHFAKRLDLSFNLLRSLEGLSAFRSLEELILDNNLLGDDLVLPG----LPHLH 78
Query: 92 TLVLTNNRLVNL-VEIDPLTSL-PKLQFLSLLDNSITKKPN--------------YRLYV 135
TL L N++ +L +D L + P L++LSLL N PN YR +V
Sbjct: 79 TLTLNKNQITDLEYLLDHLAEVTPSLEYLSLLGNVAC--PNELVNLEKDEEDYKRYRCFV 136
Query: 136 IHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAKKESMKTLMPVEVPNVSEEEEQQT 195
+HKL L+ LD +KV +ER EA A M V P S EEE
Sbjct: 137 LHKLPKLKFLDAQKVTRQEREEALVRGA---------------FMKVVKPKASSEEE--- 178
Query: 196 PKVVAP 201
K AP
Sbjct: 179 -KAAAP 183
>sp|Q9D5E4|LRC48_MOUSE Leucine-rich repeat-containing protein 48 OS=Mus musculus GN=Lrrc48
PE=2 SV=1
Length = 523
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 47 IDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEI 106
+DLS N I +E + L L L ++NNRI++++ + L KL L L NN++ N++ I
Sbjct: 92 LDLSFNNIEAIEGLDTLVNLEDLSLSNNRISKVDS--LDALVKLQVLSLGNNQISNMMNI 149
Query: 107 DPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKER 155
L P L+ LSL N +++ Y++++ L L LDF++V + R
Sbjct: 150 IYLRRFPCLRTLSLAGNPVSEAEEYKMFIYAYLSDLVYLDFRRVDEQMR 198
>sp|Q9D2H9|DAAF1_MOUSE Dynein assembly factor 1, axonemal OS=Mus musculus GN=Dnaaf1 PE=2
SV=1
Length = 634
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +NR+ +
Sbjct: 148 RCLFLQVNLLHKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRLETVAD 206
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++ E L +L L L++N L + + L S+P L+ L+L+ N +TK PNYR V +
Sbjct: 207 IEHLRECL-RLCVLDLSHNALSDPEILSVLESMPCLRVLNLMGNPVTKHIPNYRRTVTVR 265
Query: 139 LKSLRVLDFKKVKNKERMEAASL----FASEEME 168
LK L LD + V K+R A + +A+E+ E
Sbjct: 266 LKHLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|Q6AYH9|DAAF1_RAT Dynein assembly factor 1, axonemal OS=Rattus norvegicus GN=Dnaaf1
PE=2 SV=1
Length = 633
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 33/177 (18%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
R L L N I IENL A + + + L N + K+EN+ L +L L ++NN I I
Sbjct: 126 RCLWLECNGIQRIENLQA-QSELRCLFLQVNLLHKIENLEPLQKLDALNLSNNYIKTIE- 183
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEI--------------------DP-----LTSLPKLQ 116
N+ LP L+TL + +NRL + +I DP L ++P L+
Sbjct: 184 NLS-CLPVLNTLQMAHNRLETVADIEHLRECLQLCVLDLSHNSLSDPEILSVLETMPCLR 242
Query: 117 FLSLLDNSITKK-PNYRLYVIHKLKSLRVLDFKKVKNKERMEAASL----FASEEME 168
L+L+ N +TK PNYR V +LK L LD + V K+R A + +A+E+ E
Sbjct: 243 VLNLMGNPVTKHIPNYRRTVTVRLKHLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|Q501X2|CEP72_DANRE Centrosomal protein of 72 kDa OS=Danio rerio GN=cep72 PE=2 SV=2
Length = 532
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 29/158 (18%)
Query: 22 RELDLRGNKIAVIENLGATEDQF---DTIDLSDNEIVKLENMPHLNRLGTLIINNNRITR 78
R L L G I +LG + F ++DLS N +V ++ + HL
Sbjct: 28 RSLTLPGTYEGKICHLGTSLKNFVRLKSLDLSYNALVTVQGIEHL--------------- 72
Query: 79 INPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIH 137
E L +L+ L NRL +L +I L L L+ L L N + KK P+YRLY++H
Sbjct: 73 ------ELLERLN---LYYNRLASLQDIFSLHKLQNLKELDLRLNPVVKKHPHYRLYLVH 123
Query: 138 KLKSLRVLDFKKVKNKERMEAASLFASEE-MEEEAKKE 174
+ LR LD V+++ER A F+SEE ++ + KK+
Sbjct: 124 AIPKLRRLDDCPVRDRERKAALMHFSSEENLDSDYKKQ 161
>sp|B6D5P1|DAAF1_PERPL Dynein assembly factor 1, axonemal OS=Peromyscus polionotus
GN=Dnaaf1 PE=2 SV=1
Length = 622
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +NR+ +
Sbjct: 148 RCLFLQVNLLHKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRLETVAD 206
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++ E L +L L L++N L + + L S+P L+ L+L+ N +TK PNYR V +
Sbjct: 207 IQHLRECL-RLCVLDLSHNMLSDPEILSVLESMPCLRVLNLMGNPVTKHIPNYRRTVTVR 265
Query: 139 LKSLRVLDFKKVKNKERMEAASL----FASEEME 168
LK L LD + V K+R A + +A+E+ E
Sbjct: 266 LKQLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|B6D5P3|DAAF1_PERLE Dynein assembly factor 1, axonemal OS=Peromyscus leucopus GN=Dnaaf1
PE=2 SV=1
Length = 622
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +NR+ +
Sbjct: 148 RCLFLQVNLLHKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRLETVAD 206
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++ E L +L L L++N L + + L S+P L+ L+L+ N +TK PNYR V +
Sbjct: 207 IQHLRECL-RLCVLDLSHNMLSDPEILSVLESMPCLRVLNLMGNPVTKHIPNYRRTVTVR 265
Query: 139 LKSLRVLDFKKVKNKERMEAASL----FASEEME 168
LK L LD + V K+R A + +A+E+ E
Sbjct: 266 LKQLTYLDDRPVFPKDRACAEAWARGGYAAEKEE 299
>sp|Q7Z7A1|CNTRL_HUMAN Centriolin OS=Homo sapiens GN=CNTRL PE=1 SV=2
Length = 2325
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNI 83
L+L N I IE L + ++LS N+I K+E + ++ L L + N I I +
Sbjct: 130 LNLSYNLIGKIEKLDKL-LKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWL 188
Query: 84 GEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLR 143
G+ L L L L N++ +L +I L L L L L++N + P+Y + I L+SL
Sbjct: 189 GKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLE 248
Query: 144 VLDFKKVKNKERMEAASLFASEEME 168
L+ + V ++R EA F+ EE+E
Sbjct: 249 SLEGQPVTTQDRQEAFERFSLEEVE 273
>sp|Q9H069|LRC48_HUMAN Leucine-rich repeat-containing protein 48 OS=Homo sapiens GN=LRRC48
PE=2 SV=2
Length = 523
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 17/172 (9%)
Query: 4 LTADLIWKSPHFFNAIKERELDLRGN---KIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
L D +W+ + R+L L N KI +ENL +DLS N I +E +
Sbjct: 56 LRIDNLWQFENL------RKLQLDNNIIEKIEGLENLA----HLVWLDLSFNNIETIEGL 105
Query: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
L L L + NNRI++I+ + L KL L L NNR+ N++ I L L+ LSL
Sbjct: 106 DTLVNLEDLSLFNNRISKIDS--LDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSL 163
Query: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKN--KERMEAASLFASEEMEEE 170
N I++ +Y++++ L L LD++++ + K+ EA ++ +E++ +
Sbjct: 164 SRNPISEAEDYKMFICAYLPDLMYLDYRRIDDHTKKLAEAKHQYSIDELKHQ 215
>sp|A6H759|LRC72_BOVIN Leucine-rich repeat-containing protein 72 OS=Bos taurus GN=LRRC72
PE=2 SV=1
Length = 288
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 56 KLENMPHLNR---LGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNL-VEIDPLTS 111
KL + L R L L +NNN I I +LP LH L+L +N L+NL + L
Sbjct: 79 KLHGITFLTRNYCLAELYLNNNAIFDIEG--LHYLPSLHILLLHHNELINLDATVKELKG 136
Query: 112 LPKLQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLF 162
+ L+ L+L N + + YRLY+I+ L + +LD +V KER +LF
Sbjct: 137 MLNLKTLTLYQNPLCQYNLYRLYIIYHLPGVELLDRNQVTEKERRSMITLF 187
>sp|Q6FV04|RU2A_CANGA U2 small nuclear ribonucleoprotein A' OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=LEA1 PE=3 SV=1
Length = 266
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
R L L G+ IA+ +L +DL++N++V ++ H + + TL+++ NR+ ++
Sbjct: 32 RNLGLEGDDIAMPASLNHLAKPTHILDLTNNDLVFFPDLHHRDDIETLLLSKNRLMVLD- 90
Query: 82 NIGEFLP-KLHTLVLTNNRLVNLVEIDPLTSLPK-LQFLSLLDNSITKKPNYRLYVIHKL 139
LP KL +L L N + N + PL+ P ++ L L+ N I YR ++ +
Sbjct: 91 --AALLPSKLKSLSLAFNGIENFETLIPLSHCPSTVRDLVLIGNPICHLSEYRQRILALV 148
Query: 140 KSLRVLDFKKVKNKERMEA 158
SL VLDFK V E+ +A
Sbjct: 149 PSLEVLDFKLVSQAEKAQA 167
>sp|Q8NEP3|DAAF1_HUMAN Dynein assembly factor 1, axonemal OS=Homo sapiens GN=DNAAF1 PE=1
SV=5
Length = 725
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 9/156 (5%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN- 80
R L L+ N + IENL + + D ++LS+N I +EN+ L L TL + +N + +
Sbjct: 154 RCLFLQMNLLRKIENLEPLQ-KLDALNLSNNYIKTIENLSCLPVLNTLQMAHNHLETVED 212
Query: 81 -PNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHK 138
++ E L +L L L++N+L + + L S+P L+ L+L+ N + ++ PNYR V +
Sbjct: 213 IQHLQECL-RLCVLDLSHNKLSDPEILSILESMPDLRVLNLMGNPVIRQIPNYRRTVTVR 271
Query: 139 LKSLRVLDFKKVKNKERMEAASL----FASEEMEEE 170
LK L LD + V K+R A + +A+E+ E +
Sbjct: 272 LKHLTYLDDRPVFPKDRACAEAWARGGYAAEKEERQ 307
>sp|A6NJI9|LRC72_HUMAN Leucine-rich repeat-containing protein 72 OS=Homo sapiens GN=LRRC72
PE=2 SV=2
Length = 287
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 56 KLENMPHLNR---LGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNL-VEIDPLTS 111
KL + L R L L +NNN I I +LP LH L+L +N L N+ + L
Sbjct: 78 KLHGITFLTRNYCLTELYLNNNAIFEIEG--LHYLPSLHILLLHHNELTNIDATVKELKG 135
Query: 112 LPKLQFLSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLF 162
+ L+ LSL N + + YRLY+I+ L + +LD +V KER ++F
Sbjct: 136 MLNLKILSLYQNPLCQYNLYRLYIIYHLPGVELLDRNQVTEKERRSMITIF 186
>sp|Q7PK92|DAAF1_ANOGA Dynein assembly factor 1, axonemal homolog OS=Anopheles gambiae
GN=AGAP009594 PE=3 SV=2
Length = 910
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 34/178 (19%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNI 83
L L N I+ I L + Q + L +N I K+EN+ H +L TL +++N I +I
Sbjct: 47 LWLECNAISNISGLDH-QSQLRCLYLHNNLIKKIENLQHCKQLDTLNLSHNHIAKIENCG 105
Query: 84 GEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNS------------------- 124
+ LP L+TL +++N L + I+ L L K F+S+LD S
Sbjct: 106 SDILPVLNTLNISHNYLKS---IESLAELRKCDFVSVLDISHNRIEDIAIVKVLADMKGL 162
Query: 125 ----------ITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAK 172
+ P+YR +I + KSL LD + V +K+R A + EEE K
Sbjct: 163 RVLTLVGNPVVNDIPSYRKTLILECKSLTYLDSRPVFDKDRA-CAEAWKRGGYEEERK 219
>sp|Q28FY0|TILB_XENTR Protein TILB homolog OS=Xenopus tropicalis GN=lrrc6 PE=2 SV=1
Length = 470
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 1 MVRLTADLIWKSPHFFNA--IKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLE 58
MVR++ DLI + N E+ L + IE + + + L +N I K+E
Sbjct: 1 MVRVSEDLIRRRAEHNNCEIFSLEEISLHQQDLERIEYIDKWCRELKILYLQNNLIGKIE 60
Query: 59 NMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFL 118
N+ L +L L + N I +I N+ E L L LT N + +L I+ L +L+
Sbjct: 61 NVSKLKKLEYLNLALNNIEKIE-NL-EGCESLQKLDLTVNFVGDLSSINSLQENRQLREF 118
Query: 119 SLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLF 162
L+ N + YR YV+ L L+ LD K+++ ER++AA +
Sbjct: 119 YLVGNPCAEYEGYRQYVVATLPQLKWLDGKEIERSERIQAAQDY 162
>sp|O88978|TILB_MOUSE Protein TILB homolog OS=Mus musculus GN=Lrrc6 PE=1 SV=1
Length = 473
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 1 MVRLTADLIWKSPHFFNAI--KERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLE 58
M R+T DLI ++ + + EL L +I +E++ + L +N I K+E
Sbjct: 1 MGRITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIE 60
Query: 59 NMPHLNRLGTLIINNNRITRI-NPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQF 117
N+ L +L L + N I RI N E+L KL LT N + L + LT L+
Sbjct: 61 NVSKLKKLEYLNLALNNIERIENLEGCEWLTKLD---LTVNFIGELSSVKTLTHNIHLKE 117
Query: 118 LSLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEME 168
L L+ N YR +V+ L+ L+ LD K+++ ER++A + S E +
Sbjct: 118 LFLMGNPCADFDGYRQFVVVTLQQLKWLDGKEIERSERIQALQNYTSVEQQ 168
>sp|Q3SYS4|DAAF1_BOVIN Dynein assembly factor 1, axonemal OS=Bos taurus GN=DNAAF1 PE=2
SV=2
Length = 643
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 33/182 (18%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
R L L N I IENL A + + + L N + K+EN+ L +L L I+NN I I
Sbjct: 132 RCLWLECNGIQKIENLEA-QTELRCLFLQVNLLHKIENLEPLQKLDALNISNNYIKTIE- 189
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEI--------------------DP-----LTSLPKLQ 116
N+ LP L+TL + +N L + +I DP L S+P L+
Sbjct: 190 NLS-CLPVLNTLQMAHNHLETVEDIQHLRECARLCVLDLSHNKLSDPEILRVLESMPDLR 248
Query: 117 FLSLLDNSITKK-PNYRLYVIHKLKSLRVLDFKKVKNKERMEAASL----FASEEMEEEA 171
L+L+ N + K PNYR + +LK L LD + V K+R A + +A+E+ E +
Sbjct: 249 VLNLMGNPVIKNIPNYRRILTVRLKHLTYLDDRPVFPKDRACAEAWARGGYAAEKEERQQ 308
Query: 172 KK 173
++
Sbjct: 309 RE 310
>sp|O35125|LRC23_MOUSE Leucine-rich repeat-containing protein 23 OS=Mus musculus GN=Lrrc23
PE=2 SV=1
Length = 340
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNI 83
L+LRGN++ + G + + L+ N + K+E + +L+ L TL + +N+I +N
Sbjct: 181 LELRGNQLESTK--GIYLPKLKNLYLAQNLLKKVEGLENLSNLTTLHLRDNQIETLN-GF 237
Query: 84 GEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLR 143
+ + L L L +N + +L E+ L LPKL+ L LLDN + +YR + ++ L
Sbjct: 238 SQEMKSLQYLNLRSNMISDLAELAKLRDLPKLRALVLLDNPCADETDYRQEALVQMAHLE 297
Query: 144 VLDFKKVKNKERMEAASLFASEEMEEEAKKE 174
LD + ++ +R EA EE+ + K+E
Sbjct: 298 RLDKEFYEDDDRAEA------EEIRQRLKEE 322
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 49 LSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDP 108
S N+I+ E + H RLG+L + NRI ++ E L LHTL L N+L + I
Sbjct: 138 FSYNQIIDTEGIFH-PRLGSLDLKGNRIHQVTGLDPERLSSLHTLELRGNQLESTKGI-- 194
Query: 109 LTSLPKLQFLSLLDNSITK 127
LPKL+ L L N + K
Sbjct: 195 --YLPKLKNLYLAQNLLKK 211
>sp|A0JM56|LRRC9_XENTR Leucine-rich repeat-containing protein 9 OS=Xenopus tropicalis
GN=lrrc9 PE=2 SV=2
Length = 1502
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
R N + IE L + + ++L DN I KLE + L +L L INNN + +
Sbjct: 920 RWASFSSNHLTKIEGLEHCVN-LEELNLDDNSISKLEGLSKLTKLRRLSINNNLLAGFDR 978
Query: 82 NIGEFLPKLHTLVLTNNRLVNLV----------------------EIDPLTSLPKLQFLS 119
++ E L LH L NN + +L EI L L L L
Sbjct: 979 HVIESLSHLHFLSAENNNISSLAGLQRGYKLIELYLSNNCISSNQEIYSLKGLNNLVILD 1038
Query: 120 LLDNSI-TKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFAS 164
+ N I K NYRL+VI L +++ LD V+ E A +F
Sbjct: 1039 MWGNPILLKHENYRLFVIFHLSAIKALDGVAVEPSECENAKDMFGG 1084
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 46 TIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVN--- 102
++ L NEI +E + +L L L++++NRI I L L +L L NRL +
Sbjct: 1238 SLYLQGNEISHVEGLENLQFLRELVLDHNRIKAIAETSFAKLNSLVSLNLEENRLRDLNN 1297
Query: 103 -------------------LVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSLR 143
+ EI+ L +P L LS+ N I++KP R ++ +L++L+
Sbjct: 1298 LPPLLKLRKLLIGSNKIQEISEIEKLEVIPALVELSISGNPISRKPFLRNLLVVRLQNLQ 1357
Query: 144 VLDFKKVKNKERMEAASLFASEE 166
+LD + ++R A F ++
Sbjct: 1358 ILDGILITAEDRARAEMYFMEQQ 1380
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 12 SPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLII 71
S HF +EL + ++ I+ L D + L NEI +E + +L +L L +
Sbjct: 74 SCHFL-----KELWITECHLSKIQGLHHCAD-LQKLYLYHNEISVIEGLENLLKLEVLWL 127
Query: 72 NNNRITRINP------------------NIGEFLP---KLHTLVLTNNRLVNLVEIDPLT 110
NNN+I I +IGE L +L L L+ N++ + E+ L
Sbjct: 128 NNNQINVIEGLDMMQNLKELNLANNLIHSIGESLDPNVQLERLNLSGNKISSFKELTNLA 187
Query: 111 SLPKLQFLSLLDNSITKKP-----NYRLYVIHKLKSLRVLDFKKVKNKE 154
LP L L L D + P NY ++V++ + L+ LD V K+
Sbjct: 188 RLPSLMDLGLKDPQYSPNPVCLLCNYAIHVLYHIPQLQRLDTYDVSEKQ 236
>sp|Q9H2I8|CJ011_HUMAN Leucine-rich repeat-containing protein C10orf11 OS=Homo sapiens
GN=C10orf11 PE=1 SV=1
Length = 198
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 24/120 (20%)
Query: 57 LENMPHLNRLGTLIINNNRITR--INPNIGEFLPKLHTLVLTNNRLVNLVEI-DPLTSL- 112
LE + L LI++NN++ + P LP+LHTL L NR+ +L + D L +
Sbjct: 18 LEGLSAFRSLEELILDNNQLGDDLVLPG----LPRLHTLTLNKNRITDLENLLDHLAEVT 73
Query: 113 PKLQFLSLLDNSITKKPN--------------YRLYVIHKLKSLRVLDFKKVKNKERMEA 158
P L++LSLL N PN YR +V++KL +L+ LD +KV +ER EA
Sbjct: 74 PALEYLSLLGNVAC--PNELVSLEKDEEDYKRYRCFVLYKLPNLKFLDAQKVTRQEREEA 131
>sp|Q16RY9|DAAF1_AEDAE Dynein assembly factor 1, axonemal homolog OS=Aedes aegypti
GN=AAEL010772 PE=3 SV=1
Length = 1107
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 35/200 (17%)
Query: 7 DLIWKSPHFFNAIKERE-------LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN 59
D+++ + +NAI+ E L L N I+ I+ L + + + L +N I K+EN
Sbjct: 37 DILYLNYSGYNAIESLEEYVGLKCLWLECNAISEIKGL-EYQTELKCLYLQNNLITKIEN 95
Query: 60 MPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNN-----------RLVNLVEIDP 108
+ +L TL +++N ITRI + LP L+TL L++N R N V +
Sbjct: 96 LDSCKQLDTLNLSHNHITRIENCGHDILPVLNTLNLSHNYLKTADNLDHLRHCNFVSVLD 155
Query: 109 LT--------------SLPKLQFLSLLDNSITKK-PNYRLYVIHKLKSLRVLDFKKVKNK 153
L+ + +L+ L++ N + + P+YR +I + K+L LD + V ++
Sbjct: 156 LSHNRIEDIAIVKILGGMKELRVLTMTGNPVVNEIPSYRKTLILECKNLTYLDTRPVFDR 215
Query: 154 ERMEAASLFASEEMEEEAKK 173
+R A + EEE K+
Sbjct: 216 DRA-CAEAWKRGGYEEERKE 234
>sp|Q09JZ4|DAAF1_CHLRE Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas
reinhardtii GN=ODA7 PE=1 SV=1
Length = 432
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 29 NKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRIN--PNIGEF 86
N I I L A DT+++S+N++ KLE + L TLI +N + ++ ++ E
Sbjct: 78 NCIWKISGLEAVPG-LDTLNISNNQLTKLEGLACCPALRTLIATHNHLVTLDSVAHLAE- 135
Query: 87 LPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKK-PNYRLYVIHKLKSLRVL 145
L TL L NN L + +D L +P L+ L L N + NYR ++ + SL L
Sbjct: 136 CKALQTLDLQNNELEDPGIVDILKQIPDLRCLYLKGNPVVSNIKNYRKVLVTSIPSLTYL 195
Query: 146 DFKKVKNKERMEAASLFASEEMEEEAKKESMK 177
D + V + ER A + E A + +K
Sbjct: 196 DDRPVFDNERKIAQAWLEGGLEGERAMRNQLK 227
>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1
Length = 1527
Score = 51.6 bits (122), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 22 RELDLRGNKIAVI-ENLGATEDQFDTIDLSDNEIVKLEN--MPHLNRLGTLIINNNRITR 78
+ LDLR N I + N + Q T+ L+DNE+ L++ + L L + +NNNR++R
Sbjct: 55 QTLDLRFNHIEELPANAFSGLAQLTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSR 114
Query: 79 INPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHK 138
+ I + +P+L + L NN + L +LP+L L + +N +T+ P ++
Sbjct: 115 LPATIFQRMPRLEAIFLENNDIWQL-PAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNN 173
Query: 139 LKSLRV 144
LK LR+
Sbjct: 174 LKRLRL 179
>sp|Q9C099|LRCC1_HUMAN Leucine-rich repeat and coiled-coil domain-containing protein 1
OS=Homo sapiens GN=LRRCC1 PE=1 SV=2
Length = 1032
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 29/157 (18%)
Query: 7 DLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRL 66
D IW H LDL N+I+ IE L T + T++LS N I K+E + L L
Sbjct: 62 DHIWNLQH---------LDLSSNQISRIEGLN-TLTKLCTLNLSCNLITKVEGLEELINL 111
Query: 67 GTLIINNNRITRINPNIGEFLP------KLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
L ++ N I ++ +P KL + L +NR+ ++ + L + L FL+
Sbjct: 112 TRLNVSYNHI----DDLSGLIPLHGIKHKLRYIDLHSNRIDSIHHL--LQCMVGLHFLTN 165
Query: 121 L-------DNSITKKPNYRLYVIHKLKSLRVLDFKKV 150
L DN + + P YR ++ L LR+LD K +
Sbjct: 166 LILEKDGDDNPVCRLPGYRAVILQTLPQLRILDCKNI 202
>sp|Q9VR52|TILB_DROME Protein TILB OS=Drosophila melanogaster GN=tilB PE=1 SV=1
Length = 395
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 1 MVRLTADLIWK-SPHFFNAIKE-RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLE 58
MV +T +L+ K S H I E+ L I VIE++ + L N I +LE
Sbjct: 1 MVLITEELVRKKSEHNERLISTLEEISLHQEDIEVIEHIQNWCRDLKILLLQSNLIARLE 60
Query: 59 NMPHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFL 118
N+ L RL L + N I R+ N+ E L L LT N + L ++ L L+ L
Sbjct: 61 NLHKLKRLEYLNVAINNIERVE-NL-EGCESLSKLDLTLNFIRELTSVESLCGNYNLREL 118
Query: 119 SLLDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEA 158
L+ N P+YR YV+ L L LD ++ ER+ A
Sbjct: 119 VLIGNPCVDYPHYRDYVVATLPQLNSLDCVEITPSERLRA 158
>sp|Q3T0W4|PP1R7_BOVIN Protein phosphatase 1 regulatory subunit 7 OS=Bos taurus GN=PPP1R7
PE=1 SV=1
Length = 360
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
RELDL N+I IENL A + + +D+S N + +E + L RL L + NN+I +I
Sbjct: 123 RELDLYDNQIRRIENLDALT-ELEVLDISFNLLRNIEGIDKLTRLKKLFLVNNKINKI-E 180
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPN 130
NI L +L L L +NR+ + ID LT+L L FL N ITK N
Sbjct: 181 NISS-LHQLQMLELGSNRIRAIENIDTLTNLESL-FLG--KNKITKLQN 225
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
++L L NKI IEN+ + Q ++L N I +EN+ L L +L + N+IT++
Sbjct: 167 KKLFLVNNKINKIENISSLH-QLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKL-Q 224
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSI 125
N+ + L L L + +NR L +I+ L SL L+ L L N I
Sbjct: 225 NL-DALTNLTVLSMQSNR---LTKIEGLQSLVNLRELYLSHNGI 264
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 24 LDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPNI 83
L+L N+I IEN+ T +++ L N+I KL+N+ L L L + +NR+T+I
Sbjct: 191 LELGSNRIRAIENID-TLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEG-- 247
Query: 84 GEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPN 130
+ L L L L++N + I+ L + KL L + N I K N
Sbjct: 248 LQSLVNLRELYLSHN---GIEVIEGLDNNNKLTMLDIASNRIKKIEN 291
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 25/130 (19%)
Query: 22 RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINP 81
REL L N I VIE L ++ +D++ N I K+EN+ HL L +N+N + +
Sbjct: 255 RELYLSHNGIEVIEGLD-NNNKLTMLDIASNRIKKIENVSHLTELQEFWMNDNLLDCWS- 312
Query: 82 NIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKS 141
++D L L+ + L N + + P YR ++ L S
Sbjct: 313 -----------------------DLDELKGARSLETVYLERNPLQRDPQYRRKIMLALPS 349
Query: 142 LRVLDFKKVK 151
+R +D V+
Sbjct: 350 VRQIDATFVR 359
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 23 ELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENMPHLNRLGTLIINNNRITRINPN 82
++DL +I IE + + T+ L N I +EN+ L L L + +N+I RI N
Sbjct: 80 DVDLNHYRIGKIEGFEVLK-KVKTLCLRQNLIKCIENLEGLQSLRELDLYDNQIRRI-EN 137
Query: 83 IGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSLLDNSITKKPNYRLYVIHKLKSL 142
+ + L +L L ++ N L N+ ID LT L K L L++N I K N + +H+L+ L
Sbjct: 138 L-DALTELEVLDISFNLLRNIEGIDKLTRLKK---LFLVNNKINKIEN--ISSLHQLQML 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.131 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,423,066
Number of Sequences: 539616
Number of extensions: 4506336
Number of successful extensions: 20117
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 644
Number of HSP's that attempted gapping in prelim test: 18499
Number of HSP's gapped (non-prelim): 1804
length of query: 286
length of database: 191,569,459
effective HSP length: 116
effective length of query: 170
effective length of database: 128,974,003
effective search space: 21925580510
effective search space used: 21925580510
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)