Query 023146
Match_columns 286
No_of_seqs 252 out of 2000
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 08:46:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023146.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023146hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0027 Calmodulin and related 99.7 3.6E-17 7.9E-22 138.5 11.4 126 147-283 25-150 (151)
2 COG5126 FRQ1 Ca2+-binding prot 99.7 6.9E-17 1.5E-21 139.8 11.6 116 164-285 38-159 (160)
3 KOG0028 Ca2+-binding protein ( 99.6 1.3E-15 2.9E-20 131.1 11.8 123 153-283 44-171 (172)
4 PTZ00183 centrin; Provisional 99.4 1.5E-12 3.2E-17 108.2 11.8 119 164-286 35-158 (158)
5 KOG0037 Ca2+-binding protein, 99.4 1.4E-12 3.1E-17 117.3 10.2 109 164-283 75-189 (221)
6 KOG0031 Myosin regulatory ligh 99.4 3.9E-12 8.4E-17 109.3 10.4 94 186-283 73-166 (171)
7 cd05022 S-100A13 S-100A13: S-1 99.3 3.1E-12 6.6E-17 100.9 7.1 66 217-282 7-75 (89)
8 PTZ00184 calmodulin; Provision 99.3 1.7E-11 3.7E-16 100.3 11.3 94 185-282 55-148 (149)
9 PF13499 EF-hand_7: EF-hand do 99.3 1.5E-11 3.2E-16 89.5 7.0 62 219-280 1-66 (66)
10 cd05027 S-100B S-100B: S-100B 99.2 3.9E-11 8.5E-16 94.1 8.0 66 217-282 7-79 (88)
11 KOG0030 Myosin essential light 99.2 6.2E-11 1.3E-15 100.4 9.2 119 152-282 33-151 (152)
12 KOG0034 Ca2+/calmodulin-depend 99.1 2E-10 4.2E-15 102.1 9.3 118 164-285 52-178 (187)
13 cd05031 S-100A10_like S-100A10 99.1 1.7E-10 3.8E-15 90.6 7.7 67 217-283 7-80 (94)
14 cd05029 S-100A6 S-100A6: S-100 99.1 2.5E-10 5.5E-15 89.5 8.0 65 218-282 10-79 (88)
15 cd05025 S-100A1 S-100A1: S-100 99.1 2.9E-10 6.2E-15 88.9 8.2 66 217-282 8-80 (92)
16 KOG0027 Calmodulin and related 99.1 4.1E-10 8.9E-15 95.4 8.1 67 217-283 7-73 (151)
17 cd05026 S-100Z S-100Z: S-100Z 99.1 5.1E-10 1.1E-14 88.3 8.1 65 218-282 10-81 (93)
18 KOG0044 Ca2+ sensor (EF-Hand s 99.1 5.2E-10 1.1E-14 99.8 8.7 116 164-284 45-177 (193)
19 cd00052 EH Eps15 homology doma 99.0 8.6E-10 1.9E-14 79.6 6.9 60 221-282 2-61 (67)
20 cd00213 S-100 S-100: S-100 dom 99.0 1.2E-09 2.6E-14 84.3 7.4 66 217-282 7-79 (88)
21 smart00027 EH Eps15 homology d 99.0 1.6E-09 3.5E-14 85.3 8.1 64 217-282 9-72 (96)
22 PF13833 EF-hand_8: EF-hand do 98.9 2.3E-09 5.1E-14 75.4 6.5 52 231-282 1-53 (54)
23 cd00051 EFh EF-hand, calcium b 98.9 5.7E-09 1.2E-13 71.7 7.3 61 220-280 2-62 (63)
24 cd05023 S-100A11 S-100A11: S-1 98.8 1.4E-08 2.9E-13 79.9 7.8 66 217-282 8-80 (89)
25 COG5126 FRQ1 Ca2+-binding prot 98.8 1.2E-08 2.7E-13 88.6 7.9 64 218-282 20-83 (160)
26 KOG0038 Ca2+-binding kinase in 98.8 2.6E-08 5.6E-13 85.5 8.2 106 165-284 69-179 (189)
27 cd05030 calgranulins Calgranul 98.7 3.7E-08 8E-13 76.9 6.8 65 218-282 8-79 (88)
28 PF14658 EF-hand_9: EF-hand do 98.7 4.3E-08 9.3E-13 73.4 6.4 61 222-282 2-64 (66)
29 PTZ00183 centrin; Provisional 98.7 1.5E-07 3.2E-12 78.1 10.3 92 187-283 27-119 (158)
30 PTZ00184 calmodulin; Provision 98.7 1E-07 2.2E-12 77.9 8.2 65 218-282 11-75 (149)
31 KOG0041 Predicted Ca2+-binding 98.6 7.4E-08 1.6E-12 86.4 7.5 65 218-282 99-163 (244)
32 cd00252 SPARC_EC SPARC_EC; ext 98.6 9.8E-08 2.1E-12 78.8 7.6 62 217-282 47-108 (116)
33 KOG0036 Predicted mitochondria 98.6 2E-07 4.3E-12 91.0 10.6 110 164-283 32-147 (463)
34 KOG0028 Ca2+-binding protein ( 98.6 8.6E-08 1.9E-12 83.1 7.0 65 218-282 33-97 (172)
35 PLN02964 phosphatidylserine de 98.4 1.4E-06 3.1E-11 90.0 10.9 63 220-282 181-243 (644)
36 KOG0044 Ca2+ sensor (EF-Hand s 98.3 3.3E-06 7.2E-11 75.5 9.7 107 163-283 23-129 (193)
37 KOG0030 Myosin essential light 98.3 1.8E-06 3.9E-11 73.5 6.2 69 214-282 7-77 (152)
38 KOG0031 Myosin regulatory ligh 98.2 2.9E-06 6.3E-11 73.4 7.1 61 217-281 31-91 (171)
39 PF00036 EF-hand_1: EF hand; 98.1 4.4E-06 9.5E-11 52.7 3.3 27 220-246 2-28 (29)
40 cd05024 S-100A10 S-100A10: A s 98.0 3.5E-05 7.7E-10 61.2 8.0 64 218-282 8-76 (91)
41 PF00036 EF-hand_1: EF hand; 97.9 1E-05 2.2E-10 51.1 3.4 28 255-282 1-28 (29)
42 PLN02964 phosphatidylserine de 97.9 2.2E-05 4.7E-10 81.4 7.4 61 218-282 143-207 (644)
43 PF13405 EF-hand_6: EF-hand do 97.9 1.2E-05 2.6E-10 50.8 3.3 30 219-248 1-31 (31)
44 PRK12309 transaldolase/EF-hand 97.8 5E-05 1.1E-09 74.6 8.0 54 216-282 332-385 (391)
45 KOG4223 Reticulocalbin, calume 97.8 2.7E-05 5.9E-10 74.1 5.3 94 185-278 208-301 (325)
46 KOG0377 Protein serine/threoni 97.8 5.7E-05 1.2E-09 74.8 7.1 65 218-282 547-615 (631)
47 PF13833 EF-hand_8: EF-hand do 97.7 0.00011 2.3E-09 51.4 5.2 51 191-246 2-53 (54)
48 PF12763 EF-hand_4: Cytoskelet 97.6 0.00018 3.8E-09 58.4 7.1 62 217-281 9-70 (104)
49 KOG0037 Ca2+-binding protein, 97.6 0.00023 5E-09 64.7 7.2 67 216-282 55-122 (221)
50 PF13499 EF-hand_7: EF-hand do 97.5 9.9E-05 2.1E-09 53.3 4.0 58 186-244 9-66 (66)
51 KOG0036 Predicted mitochondria 97.5 0.00031 6.8E-09 69.1 7.3 67 217-283 13-80 (463)
52 PF14788 EF-hand_10: EF hand; 97.3 0.0008 1.7E-08 48.1 5.6 49 234-282 1-49 (51)
53 KOG0034 Ca2+/calmodulin-depend 97.2 0.0023 5E-08 57.1 8.9 84 190-282 47-132 (187)
54 KOG4223 Reticulocalbin, calume 97.2 0.00072 1.6E-08 64.6 5.9 127 153-283 88-229 (325)
55 PF13202 EF-hand_5: EF hand; P 97.1 0.00048 1E-08 41.9 2.7 23 221-243 2-24 (25)
56 KOG2643 Ca2+ binding protein, 97.1 0.00086 1.9E-08 66.4 5.7 90 186-282 208-314 (489)
57 KOG0046 Ca2+-binding actin-bun 97.1 0.001 2.2E-08 67.2 6.2 65 217-282 18-85 (627)
58 PF13202 EF-hand_5: EF hand; P 97.0 0.00091 2E-08 40.7 3.1 25 256-280 1-25 (25)
59 KOG0040 Ca2+-binding actin-bun 96.9 0.0015 3.2E-08 72.4 6.6 73 211-283 2243-2325(2399)
60 cd05026 S-100Z S-100Z: S-100Z 96.9 0.0023 5.1E-08 50.3 6.0 61 188-248 22-83 (93)
61 KOG4666 Predicted phosphate ac 96.9 0.0015 3.3E-08 62.8 5.4 96 184-284 266-361 (412)
62 PF10591 SPARC_Ca_bdg: Secrete 96.9 0.00041 8.9E-09 56.9 1.3 60 217-278 53-112 (113)
63 cd05031 S-100A10_like S-100A10 96.9 0.0013 2.8E-08 51.4 3.9 67 186-252 17-85 (94)
64 smart00027 EH Eps15 homology d 96.8 0.0021 4.4E-08 50.4 5.0 63 186-255 19-86 (96)
65 cd00052 EH Eps15 homology doma 96.8 0.0033 7.2E-08 44.8 5.7 56 185-247 7-62 (67)
66 cd05022 S-100A13 S-100A13: S-1 96.8 0.0021 4.5E-08 50.7 4.4 57 187-247 18-76 (89)
67 cd00051 EFh EF-hand, calcium b 96.7 0.0052 1.1E-07 41.5 5.4 54 186-244 9-62 (63)
68 cd05023 S-100A11 S-100A11: S-1 96.6 0.0053 1.1E-07 48.2 5.9 61 187-247 20-81 (89)
69 PF13405 EF-hand_6: EF-hand do 96.6 0.0025 5.4E-08 40.0 3.3 27 255-281 1-27 (31)
70 cd05030 calgranulins Calgranul 96.5 0.0055 1.2E-07 47.7 5.3 62 186-247 19-80 (88)
71 cd05025 S-100A1 S-100A1: S-100 96.5 0.0071 1.5E-07 47.0 5.9 64 185-248 17-82 (92)
72 cd00213 S-100 S-100: S-100 dom 96.5 0.0066 1.4E-07 46.5 5.6 62 186-247 17-80 (88)
73 KOG2643 Ca2+ binding protein, 96.4 0.0038 8.2E-08 62.0 4.7 51 186-245 295-345 (489)
74 smart00054 EFh EF-hand, calciu 96.3 0.0043 9.2E-08 35.7 2.8 26 220-245 2-27 (29)
75 cd05029 S-100A6 S-100A6: S-100 96.3 0.011 2.4E-07 46.3 5.8 57 190-248 25-81 (88)
76 cd05027 S-100B S-100B: S-100B 96.2 0.014 3E-07 45.7 6.0 60 188-247 20-80 (88)
77 cd00252 SPARC_EC SPARC_EC; ext 96.1 0.011 2.4E-07 48.8 5.2 52 185-245 56-107 (116)
78 KOG4065 Uncharacterized conser 96.1 0.016 3.6E-07 48.4 6.0 66 214-279 62-142 (144)
79 smart00054 EFh EF-hand, calciu 96.0 0.0084 1.8E-07 34.4 3.0 28 255-282 1-28 (29)
80 PF09279 EF-hand_like: Phospho 95.9 0.017 3.6E-07 44.0 5.1 64 219-283 1-70 (83)
81 KOG0751 Mitochondrial aspartat 95.5 0.028 6.1E-07 56.9 6.0 57 184-247 81-137 (694)
82 PRK12309 transaldolase/EF-hand 94.6 0.048 1E-06 53.8 5.0 66 163-246 310-385 (391)
83 KOG1029 Endocytic adaptor prot 94.3 0.04 8.6E-07 58.3 3.8 66 217-284 194-259 (1118)
84 KOG4251 Calcium binding protei 94.1 0.035 7.7E-07 51.9 2.6 65 218-282 101-168 (362)
85 KOG2562 Protein phosphatase 2 93.7 0.17 3.6E-06 50.9 6.6 84 190-278 328-420 (493)
86 cd05024 S-100A10 S-100A10: A s 93.1 0.29 6.2E-06 39.0 5.9 59 190-248 20-78 (91)
87 KOG0042 Glycerol-3-phosphate d 92.4 0.17 3.7E-06 52.1 4.6 63 220-282 595-657 (680)
88 KOG0377 Protein serine/threoni 92.3 0.25 5.5E-06 49.6 5.6 64 184-248 554-617 (631)
89 PF08726 EFhand_Ca_insen: Ca2+ 92.2 0.07 1.5E-06 40.4 1.2 57 215-279 3-66 (69)
90 KOG4251 Calcium binding protei 92.0 0.26 5.6E-06 46.3 4.9 93 185-278 244-341 (362)
91 PF14658 EF-hand_9: EF-hand do 91.2 0.69 1.5E-05 34.8 5.7 58 185-246 6-64 (66)
92 PF05042 Caleosin: Caleosin re 90.8 1 2.3E-05 39.9 7.3 66 218-283 7-125 (174)
93 PF14788 EF-hand_10: EF hand; 90.4 0.69 1.5E-05 33.1 4.8 49 194-247 2-50 (51)
94 KOG0035 Ca2+-binding actin-bun 90.2 0.55 1.2E-05 50.7 6.0 67 217-283 746-817 (890)
95 KOG2243 Ca2+ release channel ( 89.1 0.62 1.3E-05 52.4 5.3 58 223-281 4062-4119(5019)
96 KOG3555 Ca2+-binding proteogly 89.0 0.43 9.4E-06 46.6 3.7 62 218-283 250-311 (434)
97 KOG1955 Ral-GTPase effector RA 88.9 0.85 1.8E-05 46.6 5.9 62 218-281 231-292 (737)
98 KOG0041 Predicted Ca2+-binding 88.8 1.5 3.2E-05 40.1 6.8 90 184-278 106-199 (244)
99 PF05517 p25-alpha: p25-alpha 88.7 1.8 4E-05 37.2 7.1 60 223-282 7-69 (154)
100 PLN02952 phosphoinositide phos 87.7 3.4 7.4E-05 43.2 9.6 90 190-283 13-111 (599)
101 KOG4578 Uncharacterized conser 85.9 0.53 1.1E-05 45.8 2.3 64 218-283 333-399 (421)
102 KOG4666 Predicted phosphate ac 85.3 1.6 3.6E-05 42.5 5.4 65 218-282 259-324 (412)
103 KOG0040 Ca2+-binding actin-bun 84.1 2.8 6.1E-05 47.9 7.1 81 185-265 2261-2345(2399)
104 PF12763 EF-hand_4: Cytoskelet 82.0 3.8 8.2E-05 33.2 5.5 50 190-246 22-71 (104)
105 KOG3866 DNA-binding protein of 81.3 2.7 5.8E-05 40.8 5.0 61 222-282 248-324 (442)
106 KOG2562 Protein phosphatase 2 81.3 2.9 6.2E-05 42.4 5.4 56 224-282 284-343 (493)
107 KOG4347 GTPase-activating prot 79.1 2.2 4.8E-05 44.6 4.0 118 152-275 491-611 (671)
108 PF10591 SPARC_Ca_bdg: Secrete 77.5 1.7 3.8E-05 35.5 2.2 51 185-242 62-112 (113)
109 KOG0038 Ca2+-binding kinase in 76.3 3.1 6.8E-05 36.4 3.5 60 223-282 76-136 (189)
110 PF09069 EF-hand_3: EF-hand; 75.4 19 0.00042 28.6 7.5 64 218-284 3-77 (90)
111 KOG0169 Phosphoinositide-speci 74.3 4.8 0.0001 42.9 4.9 65 218-282 136-200 (746)
112 KOG0751 Mitochondrial aspartat 73.8 16 0.00035 37.7 8.2 94 186-285 45-139 (694)
113 KOG1029 Endocytic adaptor prot 68.5 15 0.00033 39.7 7.0 64 216-281 11-76 (1118)
114 KOG3449 60S acidic ribosomal p 67.0 23 0.00049 29.4 6.3 53 220-277 3-55 (112)
115 KOG2871 Uncharacterized conser 64.5 4.9 0.00011 39.9 2.4 63 216-278 307-370 (449)
116 KOG0998 Synaptic vesicle prote 64.1 2.8 6E-05 45.5 0.7 63 218-282 283-345 (847)
117 KOG1707 Predicted Ras related/ 61.4 26 0.00057 36.7 7.0 25 218-242 195-219 (625)
118 PF09068 EF-hand_2: EF hand; 55.2 1.1E+02 0.0023 25.6 8.6 90 192-281 13-124 (127)
119 KOG0169 Phosphoinositide-speci 54.5 51 0.0011 35.5 7.9 89 184-281 143-231 (746)
120 TIGR01848 PHA_reg_PhaR polyhyd 54.3 36 0.00078 28.0 5.4 56 225-280 10-75 (107)
121 cd07313 terB_like_2 tellurium 50.0 23 0.00049 27.5 3.6 51 232-282 13-65 (104)
122 PF07308 DUF1456: Protein of u 48.7 53 0.0011 24.6 5.2 46 235-280 14-59 (68)
123 PLN02222 phosphoinositide phos 48.3 51 0.0011 34.6 6.7 65 216-282 23-90 (581)
124 PTZ00373 60S Acidic ribosomal 45.9 86 0.0019 25.9 6.5 54 220-278 5-58 (112)
125 PF07879 PHB_acc_N: PHB/PHA ac 45.5 34 0.00074 25.7 3.7 41 225-265 10-60 (64)
126 KOG1707 Predicted Ras related/ 44.3 22 0.00048 37.2 3.4 61 218-281 315-376 (625)
127 cd00086 homeodomain Homeodomai 43.6 70 0.0015 21.7 5.0 38 218-262 13-50 (59)
128 smart00726 UIM Ubiquitin-inter 43.6 13 0.00029 22.8 1.0 17 164-180 2-18 (26)
129 PF00046 Homeobox: Homeobox do 42.7 69 0.0015 21.9 4.8 44 215-262 7-50 (57)
130 PLN02228 Phosphoinositide phos 42.6 89 0.0019 32.7 7.5 67 214-282 20-92 (567)
131 PLN02230 phosphoinositide phos 42.3 85 0.0018 33.1 7.3 69 214-283 25-103 (598)
132 KOG0039 Ferric reductase, NADH 39.5 39 0.00084 35.6 4.4 81 191-283 2-90 (646)
133 PF09068 EF-hand_2: EF hand; 37.6 32 0.0007 28.7 2.8 30 218-247 97-126 (127)
134 KOG1265 Phospholipase C [Lipid 37.1 2.4E+02 0.0053 31.5 9.7 65 218-282 221-299 (1189)
135 PF07499 RuvA_C: RuvA, C-termi 36.6 1.1E+02 0.0023 20.9 4.9 41 237-281 3-43 (47)
136 cd05833 Ribosomal_P2 Ribosomal 35.6 1.6E+02 0.0034 24.2 6.5 55 220-279 3-57 (109)
137 PF02809 UIM: Ubiquitin intera 34.9 12 0.00027 21.1 -0.1 15 163-177 2-16 (18)
138 KOG1189 Global transcriptional 34.8 22 0.00048 38.4 1.7 19 84-102 884-902 (960)
139 PF09279 EF-hand_like: Phospho 33.6 66 0.0014 24.0 3.8 28 255-283 1-28 (83)
140 KOG1955 Ral-GTPase effector RA 32.3 75 0.0016 33.0 4.9 51 214-264 261-320 (737)
141 PF05042 Caleosin: Caleosin re 30.5 1.7E+02 0.0038 26.0 6.3 64 217-280 95-164 (174)
142 PF03672 UPF0154: Uncharacteri 28.4 1E+02 0.0023 23.1 3.9 31 233-263 30-60 (64)
143 KOG0046 Ca2+-binding actin-bun 28.0 1E+02 0.0022 32.2 5.0 57 189-247 30-86 (627)
144 smart00389 HOX Homeodomain. DN 27.8 1.9E+02 0.0042 19.3 5.4 27 234-262 24-50 (56)
145 KOG4578 Uncharacterized conser 26.8 67 0.0015 31.7 3.3 57 184-247 340-399 (421)
146 PF08461 HTH_12: Ribonuclease 26.4 99 0.0022 22.7 3.6 37 231-267 10-46 (66)
147 PF11239 DUF3040: Protein of u 26.3 62 0.0014 24.7 2.5 30 38-71 2-31 (82)
148 PLN02223 phosphoinositide phos 26.0 1.9E+02 0.0042 30.1 6.7 69 214-283 12-93 (537)
149 cd04411 Ribosomal_P1_P2_L12p R 25.9 3.2E+02 0.0069 22.2 6.7 41 235-280 17-57 (105)
150 PF00404 Dockerin_1: Dockerin 25.6 69 0.0015 18.8 2.0 16 264-279 1-16 (21)
151 PF03979 Sigma70_r1_1: Sigma-7 25.5 75 0.0016 24.2 2.8 32 231-264 18-49 (82)
152 PF01885 PTS_2-RNA: RNA 2'-pho 25.3 1.1E+02 0.0023 27.3 4.1 37 228-264 26-62 (186)
153 PF11116 DUF2624: Protein of u 24.0 3.5E+02 0.0076 21.3 6.3 31 234-264 14-44 (85)
154 PRK00523 hypothetical protein; 23.9 1.4E+02 0.0029 23.0 3.9 30 234-263 39-68 (72)
155 KOG0506 Glutaminase (contains 23.6 1.3E+02 0.0028 31.2 4.8 61 223-283 91-159 (622)
156 COG4103 Uncharacterized protei 23.0 1.3E+02 0.0029 26.1 4.1 58 222-282 34-94 (148)
157 PRK06402 rpl12p 50S ribosomal 22.9 3.5E+02 0.0076 22.1 6.4 43 230-278 13-55 (106)
158 TIGR02675 tape_meas_nterm tape 22.8 86 0.0019 23.6 2.7 16 231-246 27-42 (75)
159 COG3763 Uncharacterized protei 21.8 2.1E+02 0.0046 21.9 4.5 32 233-264 37-68 (71)
160 PF14513 DAG_kinase_N: Diacylg 21.7 2.2E+02 0.0047 24.3 5.2 72 191-266 5-81 (138)
161 cd07316 terB_like_DjlA N-termi 21.6 2.7E+02 0.0058 21.2 5.4 10 232-241 13-22 (106)
162 PF05099 TerB: Tellurite resis 21.5 37 0.00081 27.5 0.5 51 231-281 36-88 (140)
163 PF14513 DAG_kinase_N: Diacylg 21.3 84 0.0018 26.8 2.6 49 232-282 5-60 (138)
164 TIGR01639 P_fal_TIGR01639 Plas 20.9 1.8E+02 0.0038 21.1 3.9 30 234-263 9-38 (61)
165 PLN02952 phosphoinositide phos 20.2 2.6E+02 0.0056 29.6 6.4 52 231-283 13-66 (599)
166 COG2058 RPP1A Ribosomal protei 20.2 3.8E+02 0.0083 22.1 6.1 52 221-278 4-55 (109)
167 KOG0998 Synaptic vesicle prote 20.1 57 0.0012 35.6 1.6 62 218-281 11-72 (847)
No 1
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.72 E-value=3.6e-17 Score=138.55 Aligned_cols=126 Identities=23% Similarity=0.271 Sum_probs=105.5
Q ss_pred hhhhhhcCccchhcccCCHHHHHHHHHhhcCCCccCcCCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhh
Q 023146 147 ATIQKQLSSSDCVAAAADDDELMQAIALSLQPSEELSAPTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQ 226 (286)
Q Consensus 147 ~~~~e~~~~~~~~~~~~dd~eL~qAialsL~~s~~~s~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~ 226 (286)
.+..++......++..++..+|+..+... +.+++|.|+|.+|+.++...............+++.||++
T Consensus 25 i~~~el~~~lr~lg~~~t~~el~~~~~~~-----------D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~ 93 (151)
T KOG0027|consen 25 ISVEELGAVLRSLGQNPTEEELRDLIKEI-----------DLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRV 93 (151)
T ss_pred ccHHHHHHHHHHcCCCCCHHHHHHHHHHh-----------CCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHH
Confidence 45667777777777777788888777765 5568999999999999987543211111245699999999
Q ss_pred hcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 227 FNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 227 fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
||.+++|+||..+|+.+|..+|..++.+++..||+.+|.|+||.|+|.+|+.+|...
T Consensus 94 fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 94 FDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred HccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999753
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.71 E-value=6.9e-17 Score=139.79 Aligned_cols=116 Identities=24% Similarity=0.306 Sum_probs=97.1
Q ss_pred CHHHHHHHHHhhcCCCccCc------CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccH
Q 023146 164 DDDELMQAIALSLQPSEELS------APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISL 237 (286)
Q Consensus 164 dd~eL~qAialsL~~s~~~s------~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~ 237 (286)
+..+|..+++ +++-.+... ...+. +++.|+|.+|+.+|..+.. .....++|++||++||++++|+|+.
T Consensus 38 ~~~el~~ilr-~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~----~~~~~Eel~~aF~~fD~d~dG~Is~ 111 (160)
T COG5126 38 DRNELGKILR-SLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK----RGDKEEELREAFKLFDKDHDGYISI 111 (160)
T ss_pred cHHHHHHHHH-HcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc----cCCcHHHHHHHHHHhCCCCCceecH
Confidence 3677777775 322222111 44555 8899999999999987543 3677899999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhcCC
Q 023146 238 RDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRCNM 285 (286)
Q Consensus 238 ~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~~~ 285 (286)
.+|+.+|+.+|..+++++|..||+.+|.|++|.|+|++|+.++...+.
T Consensus 112 ~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~~ 159 (160)
T COG5126 112 GELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSPT 159 (160)
T ss_pred HHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhccCC
Confidence 999999999999999999999999999999999999999999987654
No 3
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=1.3e-15 Score=131.11 Aligned_cols=123 Identities=31% Similarity=0.406 Sum_probs=105.8
Q ss_pred cCccchhcccCCHHHHHHHH-HhhcCCCccCc----CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhh
Q 023146 153 LSSSDCVAAAADDDELMQAI-ALSLQPSEELS----APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQF 227 (286)
Q Consensus 153 ~~~~~~~~~~~dd~eL~qAi-alsL~~s~~~s----~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~f 227 (286)
..+.+++ |.++|..|+ ++.+.+..... ...+.++.|.|+|.+|..+|..+... .++.++|..+|++|
T Consensus 44 ~~~~g~i----D~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e----~dt~eEi~~afrl~ 115 (172)
T KOG0028|consen 44 PDMAGKI----DVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGE----RDTKEEIKKAFRLF 115 (172)
T ss_pred cCCCCcc----cHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhc----cCcHHHHHHHHHcc
Confidence 4455666 499996655 77766554443 56778889999999999998776543 45899999999999
Q ss_pred cCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 228 NDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 228 D~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
|.|++|.|+..+|+.++..||++||++++..||..+|.|++|.|+-++|+.+|+..
T Consensus 116 D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 116 DDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred cccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999864
No 4
>PTZ00183 centrin; Provisional
Probab=99.43 E-value=1.5e-12 Score=108.25 Aligned_cols=119 Identities=29% Similarity=0.426 Sum_probs=95.0
Q ss_pred CHHHHHHHHHhh-cCCCccCc----CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHH
Q 023146 164 DDDELMQAIALS-LQPSEELS----APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLR 238 (286)
Q Consensus 164 dd~eL~qAials-L~~s~~~s----~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~ 238 (286)
+..+|..++... +....... ...+.+++|.|+|.+|...+..... .......+..+|..||.+++|+|+..
T Consensus 35 ~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~----~~~~~~~l~~~F~~~D~~~~G~i~~~ 110 (158)
T PTZ00183 35 DPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLG----ERDPREEILKAFRLFDDDKTGKISLK 110 (158)
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhc----CCCcHHHHHHHHHHhCCCCCCcCcHH
Confidence 466777666533 11111111 3457788999999999877654221 13456789999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhcCCC
Q 023146 239 DLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRCNMI 286 (286)
Q Consensus 239 EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~~~l 286 (286)
+|..+|..+|..++..++..||..+|.+++|.|+|++|+.++...|++
T Consensus 111 e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 158 (158)
T PTZ00183 111 NLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKTNLF 158 (158)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcccCC
Confidence 999999999999999999999999999999999999999999988764
No 5
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.40 E-value=1.4e-12 Score=117.29 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=96.6
Q ss_pred CHHHHHHHHHhh-cCCCccCc-----CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccH
Q 023146 164 DDDELMQAIALS-LQPSEELS-----APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISL 237 (286)
Q Consensus 164 dd~eL~qAials-L~~s~~~s-----~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~ 237 (286)
...||++|+..+ ..++...+ +..+.++.|+|.|.||..+++. ...|+.+|+.||.|++|.|+.
T Consensus 75 ~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~-----------i~~Wr~vF~~~D~D~SG~I~~ 143 (221)
T KOG0037|consen 75 LAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY-----------INQWRNVFRTYDRDRSGTIDS 143 (221)
T ss_pred cHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH-----------HHHHHHHHHhcccCCCCcccH
Confidence 478999998854 44555444 7789999999999999999977 347999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 238 RDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 238 ~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
.||+.+|..+|..|+.+-++-|++.+|.-++|.|.|++|+.++...
T Consensus 144 sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L 189 (221)
T KOG0037|consen 144 SELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL 189 (221)
T ss_pred HHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH
Confidence 9999999999999999999999999998889999999999998653
No 6
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.37 E-value=3.9e-12 Score=109.33 Aligned_cols=94 Identities=20% Similarity=0.181 Sum_probs=86.1
Q ss_pred ccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcC
Q 023146 186 TQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDS 265 (286)
Q Consensus 186 ~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~ 265 (286)
+-....|.|+|.-|++++..++.. ..+++.|..||..||.+++|.|..+.|+.+|...|..+++++|..|++.+-+
T Consensus 73 M~~Ea~gPINft~FLTmfGekL~g----tdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~ 148 (171)
T KOG0031|consen 73 MMKEAPGPINFTVFLTMFGEKLNG----TDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPI 148 (171)
T ss_pred HHHhCCCCeeHHHHHHHHHHHhcC----CCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCc
Confidence 344567899999999999987653 6778999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHHhc
Q 023146 266 DGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 266 D~DG~IdyeEFv~ll~~~ 283 (286)
|..|.|+|..|+.+|+..
T Consensus 149 d~~G~~dy~~~~~~ithG 166 (171)
T KOG0031|consen 149 DKKGNFDYKAFTYIITHG 166 (171)
T ss_pred ccCCceeHHHHHHHHHcc
Confidence 999999999999999853
No 7
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.33 E-value=3.1e-12 Score=100.86 Aligned_cols=66 Identities=17% Similarity=0.358 Sum_probs=62.4
Q ss_pred HHHHHHHhhhhcC-CCCCcccHHHHHHHHHH-cCCCCCH-HHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 217 EDEVILHFFQFND-AEKGSISLRDLRRVSVA-HDFIWTD-DELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 217 eeeL~~aF~~fD~-dgdG~Is~~EL~~~L~~-lG~~Ltd-eEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
...|+.+|+.||. +++|+|+..+|+.+|+. +|..++. .++..||+.+|.|+||.|+|+||+.+|..
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3578999999999 99999999999999999 9988998 99999999999999999999999999865
No 8
>PTZ00184 calmodulin; Provisional
Probab=99.32 E-value=1.7e-11 Score=100.30 Aligned_cols=94 Identities=30% Similarity=0.340 Sum_probs=81.4
Q ss_pred CccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Q 023146 185 PTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFD 264 (286)
Q Consensus 185 ~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D 264 (286)
..+.+++|.|+|.+|+.++..... .......+..+|..||.+++|+|+..+|..+|..+|..++..++..+|..+|
T Consensus 55 ~~d~~~~g~i~~~ef~~~l~~~~~----~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
T PTZ00184 55 EVDADGNGTIDFPEFLTLMARKMK----DTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130 (149)
T ss_pred hcCcCCCCcCcHHHHHHHHHHhcc----CCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcC
Confidence 346678899999999987654221 1334578899999999999999999999999999999999999999999999
Q ss_pred CCCCCcccHHHHHHHHHh
Q 023146 265 SDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 265 ~D~DG~IdyeEFv~ll~~ 282 (286)
.+++|.|+|.+|+.++..
T Consensus 131 ~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 131 VDGDGQINYEEFVKMMMS 148 (149)
T ss_pred CCCCCcCcHHHHHHHHhc
Confidence 999999999999998864
No 9
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.26 E-value=1.5e-11 Score=89.53 Aligned_cols=62 Identities=27% Similarity=0.484 Sum_probs=55.4
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHH----HHHHhcCCCCCcccHHHHHHHH
Q 023146 219 EVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFD----MIHCFDSDGDGKLNLEDFQKIV 280 (286)
Q Consensus 219 eL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~----mI~~~D~D~DG~IdyeEFv~ll 280 (286)
.|+.+|..||.+++|+|+..||..++..++..++...+.. +|+.+|.++||.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 3788999999999999999999999999997776655544 5999999999999999999886
No 10
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.22 E-value=3.9e-11 Score=94.10 Aligned_cols=66 Identities=20% Similarity=0.339 Sum_probs=61.6
Q ss_pred HHHHHHHhhhhc-CCCCC-cccHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 217 EDEVILHFFQFN-DAEKG-SISLRDLRRVSVA-----HDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 217 eeeL~~aF~~fD-~dgdG-~Is~~EL~~~L~~-----lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
...|+.+|+.|| .+|+| +|+..+|+.+|+. +|..++..+|..||+.+|.|++|.|+|.+|+.++..
T Consensus 7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 357999999998 79999 5999999999999 899999999999999999999999999999998864
No 11
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.21 E-value=6.2e-11 Score=100.42 Aligned_cols=119 Identities=15% Similarity=0.142 Sum_probs=95.5
Q ss_pred hcCccchhcccCCHHHHHHHHHhhcCCCccCcCCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCC
Q 023146 152 QLSSSDCVAAAADDDELMQAIALSLQPSEELSAPTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAE 231 (286)
Q Consensus 152 ~~~~~~~~~~~~dd~eL~qAialsL~~s~~~s~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dg 231 (286)
.+-.+..++++|+..++.+.+..-... .-+--.|+|.+|+.|+.... .++.+.+.+++.+.+++||+++
T Consensus 33 ~gdvlRalG~nPT~aeV~k~l~~~~~~---------~~~~~rl~FE~fLpm~q~va--knk~q~t~edfvegLrvFDkeg 101 (152)
T KOG0030|consen 33 VGDVLRALGQNPTNAEVLKVLGQPKRR---------EMNVKRLDFEEFLPMYQQVA--KNKDQGTYEDFVEGLRVFDKEG 101 (152)
T ss_pred HHHHHHHhcCCCcHHHHHHHHcCcccc---------hhhhhhhhHHHHHHHHHHHH--hccccCcHHHHHHHHHhhcccC
Confidence 344556677788888888877653111 00225789999999986532 2356788899999999999999
Q ss_pred CCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 232 KGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 232 dG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
+|+|...+|+.+|+++|..|+++|+..++.-. .|.+|.|+|+.|++.+..
T Consensus 102 ~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 102 NGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIMS 151 (152)
T ss_pred CcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHhc
Confidence 99999999999999999999999999999876 477899999999998764
No 12
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.14 E-value=2e-10 Score=102.07 Aligned_cols=118 Identities=19% Similarity=0.218 Sum_probs=89.3
Q ss_pred CHHHHHHHHHhhcCCCccCc-CCccCCCCcc-cchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHH
Q 023146 164 DDDELMQAIALSLQPSEELS-APTQNGKKGI-ACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLR 241 (286)
Q Consensus 164 dd~eL~qAialsL~~s~~~s-~~~d~d~~G~-Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~ 241 (286)
..++++.+..+...+..... ...+.+++|. |+|.+|+.....-.. .......+.-||++||.+++|+|+.++|.
T Consensus 52 t~eef~~i~~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~----~~~~~~Kl~faF~vYD~~~~G~I~reel~ 127 (187)
T KOG0034|consen 52 TKEEFLSIPELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSP----KASKREKLRFAFRVYDLDGDGFISREELK 127 (187)
T ss_pred CHHHHHHHHHHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcC----CccHHHHHHHHHHHhcCCCCCcCcHHHHH
Confidence 46677777765544443333 4456666766 999999887755322 13334689999999999999999999999
Q ss_pred HHHHHc-CCCCC--HHH----HHHHHHHhcCCCCCcccHHHHHHHHHhcCC
Q 023146 242 RVSVAH-DFIWT--DDE----LFDMIHCFDSDGDGKLNLEDFQKIVSRCNM 285 (286)
Q Consensus 242 ~~L~~l-G~~Lt--deE----v~~mI~~~D~D~DG~IdyeEFv~ll~~~~~ 285 (286)
++|..+ |..++ ++. +..+|.++|.|+||+|+|+||+.++.+.|.
T Consensus 128 ~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~ 178 (187)
T KOG0034|consen 128 QILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPD 178 (187)
T ss_pred HHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCcc
Confidence 999986 55566 544 456777899999999999999999988753
No 13
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=99.13 E-value=1.7e-10 Score=90.58 Aligned_cols=67 Identities=21% Similarity=0.384 Sum_probs=61.2
Q ss_pred HHHHHHHhhhhcC-CC-CCcccHHHHHHHHHH-----cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 217 EDEVILHFFQFND-AE-KGSISLRDLRRVSVA-----HDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 217 eeeL~~aF~~fD~-dg-dG~Is~~EL~~~L~~-----lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
...|..+|..||. ++ +|+|+..+|+.+|+. +|..++..++..||..+|.+++|.|+|.+|+.+|...
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4679999999997 97 799999999999987 5778899999999999999999999999999998764
No 14
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=99.12 E-value=2.5e-10 Score=89.52 Aligned_cols=65 Identities=14% Similarity=0.343 Sum_probs=60.2
Q ss_pred HHHHHHhhhhcC-CC-CCcccHHHHHHHHH---HcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFND-AE-KGSISLRDLRRVSV---AHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~-dg-dG~Is~~EL~~~L~---~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..|..+|+.||. +| +|+|+..||+.+|+ .+|..++.+++.+||+.+|.|++|+|+|.+|+.+|..
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 578999999997 67 89999999999997 3799999999999999999999999999999998865
No 15
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=99.11 E-value=2.9e-10 Score=88.89 Aligned_cols=66 Identities=17% Similarity=0.327 Sum_probs=59.3
Q ss_pred HHHHHHHhhhhc-CCCCCc-ccHHHHHHHHHH-cC----CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 217 EDEVILHFFQFN-DAEKGS-ISLRDLRRVSVA-HD----FIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 217 eeeL~~aF~~fD-~dgdG~-Is~~EL~~~L~~-lG----~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
...|+.+|.+|| .+++|+ |+..+|+.+|+. +| ..++..++..||..+|.+++|.|+|++|+.++..
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 468999999997 999995 999999999986 54 3568999999999999999999999999998864
No 16
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.07 E-value=4.1e-10 Score=95.36 Aligned_cols=67 Identities=30% Similarity=0.429 Sum_probs=64.3
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
..++..+|.+||.+++|+|+..+|..+|+.+|..+|..++..||..+|.+++|.|+|.+|+.+|...
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~ 73 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKL 73 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhh
Confidence 4689999999999999999999999999999999999999999999999999999999999999764
No 17
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=99.07 E-value=5.1e-10 Score=88.29 Aligned_cols=65 Identities=15% Similarity=0.255 Sum_probs=57.5
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHH-c----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFN-DAEKG-SISLRDLRRVSVA-H----DFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD-~dgdG-~Is~~EL~~~L~~-l----G~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..|+.+|+.|| .+|+| +|+..||+.+|.. + +...+..+|..||..+|.|++|.|+|.||+.+|..
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 57889999999 78998 5999999999977 3 34457889999999999999999999999999865
No 18
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.06 E-value=5.2e-10 Score=99.81 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=88.6
Q ss_pred CHHHHHHHHHhhcCCCccCc------CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccH
Q 023146 164 DDDELMQAIALSLQPSEELS------APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISL 237 (286)
Q Consensus 164 dd~eL~qAialsL~~s~~~s------~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~ 237 (286)
+..+++...+.-........ ...|.+++|+|+|.||+........ ...++.+.++|++||.+|+|+|+.
T Consensus 45 ~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~r-----Gt~eekl~w~F~lyD~dgdG~It~ 119 (193)
T KOG0044|consen 45 TLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSR-----GTLEEKLKWAFRLYDLDGDGYITK 119 (193)
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcC-----CcHHHHhhhhheeecCCCCceEcH
Confidence 45566666666443111111 6679999999999999877655321 455788999999999999999999
Q ss_pred HHHHHHHHHc----C-------CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhcC
Q 023146 238 RDLRRVSVAH----D-------FIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRCN 284 (286)
Q Consensus 238 ~EL~~~L~~l----G-------~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~~ 284 (286)
.++..++..+ | .....+-+..+|..+|.|.||.|++++|+..+...+
T Consensus 120 ~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~ 177 (193)
T KOG0044|consen 120 EEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADP 177 (193)
T ss_pred HHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCH
Confidence 9999988864 3 122346688999999999999999999999887653
No 19
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=99.02 E-value=8.6e-10 Score=79.57 Aligned_cols=60 Identities=23% Similarity=0.225 Sum_probs=56.0
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 221 ILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 221 ~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
+.+|..||.+++|+|+..+|..+|..+| ++..++..||..+|.+++|.|+|.+|+.++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 5689999999999999999999999987 48999999999999999999999999998864
No 20
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=99.00 E-value=1.2e-09 Score=84.31 Aligned_cols=66 Identities=15% Similarity=0.398 Sum_probs=59.4
Q ss_pred HHHHHHHhhhhcC--CCCCcccHHHHHHHHHH-cCCCC----CHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 217 EDEVILHFFQFND--AEKGSISLRDLRRVSVA-HDFIW----TDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 217 eeeL~~aF~~fD~--dgdG~Is~~EL~~~L~~-lG~~L----tdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
...++.+|..||. +++|+|+..+|..+|+. +|..+ +..++..||..+|.+++|.|+|++|+.+|..
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 4678999999999 89999999999999986 56544 5899999999999999999999999998865
No 21
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=99.00 E-value=1.6e-09 Score=85.31 Aligned_cols=64 Identities=14% Similarity=0.249 Sum_probs=59.6
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
...+..+|..||.+++|+|+..+|+.+|+.+| ++..++..||..+|.+++|.|+|++|+.+|..
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 45789999999999999999999999999976 78999999999999999999999999998864
No 22
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.95 E-value=2.3e-09 Score=75.35 Aligned_cols=52 Identities=25% Similarity=0.559 Sum_probs=49.4
Q ss_pred CCCcccHHHHHHHHHHcCCC-CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 231 EKGSISLRDLRRVSVAHDFI-WTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 231 gdG~Is~~EL~~~L~~lG~~-LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
.+|+|+.++|+.+|..+|.. ++..++..||..+|.+++|.|+|+||+.+|..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 37999999999999889999 99999999999999999999999999999874
No 23
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.91 E-value=5.7e-09 Score=71.70 Aligned_cols=61 Identities=28% Similarity=0.480 Sum_probs=58.3
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 023146 220 VILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIV 280 (286)
Q Consensus 220 L~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll 280 (286)
+..+|..+|.+++|.|+..++..++..++..++...+..++..++.+++|.|+|.+|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 5678999999999999999999999999999999999999999999999999999999876
No 24
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.83 E-value=1.4e-08 Score=79.95 Aligned_cols=66 Identities=15% Similarity=0.240 Sum_probs=58.2
Q ss_pred HHHHHHHhhh-hcCCCCC-cccHHHHHHHHHHc-----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 217 EDEVILHFFQ-FNDAEKG-SISLRDLRRVSVAH-----DFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 217 eeeL~~aF~~-fD~dgdG-~Is~~EL~~~L~~l-----G~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
...|..+|+. +|.+|+| +|+..||+.+|... +....+.++..||+.+|.|+||.|+|++|+.+|..
T Consensus 8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 3578999999 7888876 99999999999885 44667899999999999999999999999998864
No 25
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.82 E-value=1.2e-08 Score=88.55 Aligned_cols=64 Identities=19% Similarity=0.356 Sum_probs=61.6
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
.+|+.+|.+||++++|.|+..+|..+|+.+|.++|..++.+||..+|. +.+.|+|.+|+.+|..
T Consensus 20 ~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~ 83 (160)
T COG5126 20 QELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSV 83 (160)
T ss_pred HHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999999 9999999999999865
No 26
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.77 E-value=2.6e-08 Score=85.55 Aligned_cols=106 Identities=18% Similarity=0.215 Sum_probs=83.8
Q ss_pred HHHHHHHHHhhcCCCccCcCCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 023146 165 DDELMQAIALSLQPSEELSAPTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVS 244 (286)
Q Consensus 165 d~eL~qAialsL~~s~~~s~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L 244 (286)
.+.+++-|+.++. .||.|.++|..|+.|..--. ......-.+.-||++||-+++++|..++|..++
T Consensus 69 enpfk~ri~e~FS----------eDG~GnlsfddFlDmfSV~s----E~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l 134 (189)
T KOG0038|consen 69 ENPFKRRICEVFS----------EDGRGNLSFDDFLDMFSVFS----EMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTL 134 (189)
T ss_pred cChHHHHHHHHhc----------cCCCCcccHHHHHHHHHHHH----hhChHHhhhhheeEEeecCCCCcccHHHHHHHH
Confidence 3456666666532 46799999999998876522 113334567789999999999999999999999
Q ss_pred HHc-CCCCCHHHH----HHHHHHhcCCCCCcccHHHHHHHHHhcC
Q 023146 245 VAH-DFIWTDDEL----FDMIHCFDSDGDGKLNLEDFQKIVSRCN 284 (286)
Q Consensus 245 ~~l-G~~LtdeEv----~~mI~~~D~D~DG~IdyeEFv~ll~~~~ 284 (286)
+.| -..|+++++ .++|.++|.|+||+|+|.+|-.++.+.+
T Consensus 135 ~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~raP 179 (189)
T KOG0038|consen 135 TSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILRAP 179 (189)
T ss_pred HHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhCc
Confidence 997 366888886 5577789999999999999999998865
No 27
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.71 E-value=3.7e-08 Score=76.93 Aligned_cols=65 Identities=15% Similarity=0.357 Sum_probs=58.1
Q ss_pred HHHHHHhhhhcCC--CCCcccHHHHHHHHH-HcCCCCC----HHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDA--EKGSISLRDLRRVSV-AHDFIWT----DDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~d--gdG~Is~~EL~~~L~-~lG~~Lt----deEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..|...|+.|+.. .+|+|+..+|+.+|. .+|..++ ..++..||..+|.+++|.|+|++|+.+|..
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 4688899999855 589999999999997 6777777 999999999999999999999999999875
No 28
>PF14658 EF-hand_9: EF-hand domain
Probab=98.70 E-value=4.3e-08 Score=73.45 Aligned_cols=61 Identities=26% Similarity=0.396 Sum_probs=57.9
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHcCC-CCCHHHHHHHHHHhcCCCC-CcccHHHHHHHHHh
Q 023146 222 LHFFQFNDAEKGSISLRDLRRVSVAHDF-IWTDDELFDMIHCFDSDGD-GKLNLEDFQKIVSR 282 (286)
Q Consensus 222 ~aF~~fD~dgdG~Is~~EL~~~L~~lG~-~LtdeEv~~mI~~~D~D~D-G~IdyeEFv~ll~~ 282 (286)
.+|.+||.++.|.|....|..+|+.++. .+++.+++.+++.+|+++. |.|+|+.|+.+|+.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 3799999999999999999999999988 9999999999999999988 99999999999974
No 29
>PTZ00183 centrin; Provisional
Probab=98.69 E-value=1.5e-07 Score=78.13 Aligned_cols=92 Identities=13% Similarity=0.240 Sum_probs=77.2
Q ss_pred cCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc-CCCCCHHHHHHHHHHhcC
Q 023146 187 QNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH-DFIWTDDELFDMIHCFDS 265 (286)
Q Consensus 187 d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l-G~~LtdeEv~~mI~~~D~ 265 (286)
+.+++|.|++.+|..++... . .......+..+|..+|.+++|.|+..+|..++... ....+...+..+|..+|.
T Consensus 27 D~~~~G~i~~~e~~~~l~~~-g----~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~ 101 (158)
T PTZ00183 27 DTDGSGTIDPKELKVAMRSL-G----FEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDD 101 (158)
T ss_pred CCCCCCcccHHHHHHHHHHh-C----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCC
Confidence 55789999999998777542 1 13456789999999999999999999999988764 455677899999999999
Q ss_pred CCCCcccHHHHHHHHHhc
Q 023146 266 DGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 266 D~DG~IdyeEFv~ll~~~ 283 (286)
+++|.|++.+|..++...
T Consensus 102 ~~~G~i~~~e~~~~l~~~ 119 (158)
T PTZ00183 102 DKTGKISLKNLKRVAKEL 119 (158)
T ss_pred CCCCcCcHHHHHHHHHHh
Confidence 999999999999998754
No 30
>PTZ00184 calmodulin; Provisional
Probab=98.66 E-value=1e-07 Score=77.85 Aligned_cols=65 Identities=29% Similarity=0.467 Sum_probs=59.8
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..+..+|..||.+++|.|+..+|..+|..+|..++...+..|+..+|.+++|.|+|++|+.++..
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 75 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMAR 75 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHH
Confidence 56888999999999999999999999999998889999999999999999999999999988764
No 31
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.65 E-value=7.4e-08 Score=86.42 Aligned_cols=65 Identities=29% Similarity=0.377 Sum_probs=61.7
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..+..+|+.||.+.+|||+..||+.||.+||.+-|.--+..||..+|-|.||+|+|.+|+-++..
T Consensus 99 k~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 99 KDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred HHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999988764
No 32
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.64 E-value=9.8e-08 Score=78.79 Aligned_cols=62 Identities=21% Similarity=0.316 Sum_probs=55.0
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
...|.++|..||.|++|+|+..||..++ ++ .....+..+|..+|.|+||.|+|+||+.++..
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~--~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR--LD--PNEHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc--chHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 4679999999999999999999999877 33 45677899999999999999999999999854
No 33
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.63 E-value=2e-07 Score=90.99 Aligned_cols=110 Identities=15% Similarity=0.188 Sum_probs=90.7
Q ss_pred CHHHHHHHHHh-hcCCCccC-c----CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccH
Q 023146 164 DDDELMQAIAL-SLQPSEEL-S----APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISL 237 (286)
Q Consensus 164 dd~eL~qAial-sL~~s~~~-s----~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~ 237 (286)
|.+.|-++++. ..+-+... . ...+.+.+|.+||.+|..-+.. .+.+|..+|+.+|.+++|.|..
T Consensus 32 d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~----------~E~~l~~~F~~iD~~hdG~i~~ 101 (463)
T KOG0036|consen 32 DLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN----------KELELYRIFQSIDLEHDGKIDP 101 (463)
T ss_pred eHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH----------hHHHHHHHHhhhccccCCccCH
Confidence 46777777643 33311111 1 6789999999999999654432 3678999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 238 RDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 238 ~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
.|+...|..+|.+++++++.++|..+|+++++.|++++|...+.-.
T Consensus 102 ~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~ 147 (463)
T KOG0036|consen 102 NEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLY 147 (463)
T ss_pred HHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcC
Confidence 9999999999999999999999999999999999999999887644
No 34
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.62 E-value=8.6e-08 Score=83.14 Aligned_cols=65 Identities=25% Similarity=0.482 Sum_probs=62.3
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
.++..+|..||.+++|+|+..+|.-+++.+|+.+..++|.+|+..+|.++.|.|+|++|+.+|+.
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~ 97 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTV 97 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999865
No 35
>PLN02964 phosphatidylserine decarboxylase
Probab=98.42 E-value=1.4e-06 Score=89.96 Aligned_cols=63 Identities=13% Similarity=0.263 Sum_probs=61.0
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 220 VILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 220 L~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
+..+|..||.+++|.|+..||..+|..++...+++++..+|+.+|.|++|.|+++||+.+|..
T Consensus 181 i~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 181 ARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 899999999999999999999999999998899999999999999999999999999999877
No 36
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.33 E-value=3.3e-06 Score=75.52 Aligned_cols=107 Identities=18% Similarity=0.098 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHhhcCCCccCcCCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHH
Q 023146 163 ADDDELMQAIALSLQPSEELSAPTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRR 242 (286)
Q Consensus 163 ~dd~eL~qAialsL~~s~~~s~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~ 242 (286)
.+..+|++.-.--...+ -+|.++..+|..+.+..-. ......-...+|+.||.+++|+|+..||..
T Consensus 23 f~~~ei~~~Yr~Fk~~c----------P~G~~~~~~F~~i~~~~fp----~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~ 88 (193)
T KOG0044|consen 23 FSKKEIQQWYRGFKNEC----------PSGRLTLEEFREIYASFFP----DGDASKYAELVFRTFDKNKDGTIDFLEFIC 88 (193)
T ss_pred CCHHHHHHHHHHhcccC----------CCCccCHHHHHHHHHHHCC----CCCHHHHHHHHHHHhcccCCCCcCHHHHHH
Confidence 34566666655444444 3788999999887765321 244556778899999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 243 VSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 243 ~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
+|..+--...++-+...|+.+|.|++|.|++.|++.++...
T Consensus 89 als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i 129 (193)
T KOG0044|consen 89 ALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAI 129 (193)
T ss_pred HHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHH
Confidence 99888767778888899999999999999999999998753
No 37
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.26 E-value=1.8e-06 Score=73.51 Aligned_cols=69 Identities=19% Similarity=0.202 Sum_probs=62.3
Q ss_pred cCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC--CCCcccHHHHHHHHHh
Q 023146 214 KMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSD--GDGKLNLEDFQKIVSR 282 (286)
Q Consensus 214 ~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D--~DG~IdyeEFv~ll~~ 282 (286)
.....+++++|.+||..++|.|+...+..+|+++|.++|+.+|.+.+..+..+ +--.|+|++|+-++..
T Consensus 7 ~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~ 77 (152)
T KOG0030|consen 7 PDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQ 77 (152)
T ss_pred cchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHH
Confidence 34457999999999999999999999999999999999999999999999887 4568999999998854
No 38
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.25 E-value=2.9e-06 Score=73.39 Aligned_cols=61 Identities=25% Similarity=0.290 Sum_probs=55.5
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
..++++||.++|.|++|.|...+|+.+|..+|...++++|..||.+.. |-|+|.-|+.++.
T Consensus 31 IqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~----gPINft~FLTmfG 91 (171)
T KOG0031|consen 31 IQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEAP----GPINFTVFLTMFG 91 (171)
T ss_pred HHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCC----CCeeHHHHHHHHH
Confidence 358999999999999999999999999999999999999999999864 6788888888774
No 39
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.06 E-value=4.4e-06 Score=52.74 Aligned_cols=27 Identities=15% Similarity=0.374 Sum_probs=14.8
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHH
Q 023146 220 VILHFFQFNDAEKGSISLRDLRRVSVA 246 (286)
Q Consensus 220 L~~aF~~fD~dgdG~Is~~EL~~~L~~ 246 (286)
+..+|+.||+|++|+|+.+||..+|+.
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 445555555555555555555555544
No 40
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.98 E-value=3.5e-05 Score=61.24 Aligned_cols=64 Identities=19% Similarity=0.353 Sum_probs=54.6
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHH-c----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVA-H----DFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~-l----G~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..|+.+|+.|- ...|.++..||+.+|.. | ...-....|..|+...|.|+||.|+|.||+.++..
T Consensus 8 ~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 8 EKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 56888999998 45679999999999975 3 44446788999999999999999999999998864
No 41
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.94 E-value=1e-05 Score=51.10 Aligned_cols=28 Identities=39% Similarity=0.862 Sum_probs=26.2
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 255 ELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 255 Ev~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
|++.+|+.+|.|+||+|+|+||+.+|..
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 5889999999999999999999999875
No 42
>PLN02964 phosphatidylserine decarboxylase
Probab=97.92 E-value=2.2e-05 Score=81.38 Aligned_cols=61 Identities=15% Similarity=0.262 Sum_probs=56.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcC-CCCCHHH---HHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHD-FIWTDDE---LFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG-~~LtdeE---v~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
.++.++|.+||.+++|+| |..+|..+| ..++..+ +..||..+|.+++|.|+|+||+.+|..
T Consensus 143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~ 207 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKA 207 (644)
T ss_pred HHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 688999999999999997 999999999 5888887 899999999999999999999999875
No 43
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.91 E-value=1.2e-05 Score=50.78 Aligned_cols=30 Identities=20% Similarity=0.310 Sum_probs=25.9
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHH-HcC
Q 023146 219 EVILHFFQFNDAEKGSISLRDLRRVSV-AHD 248 (286)
Q Consensus 219 eL~~aF~~fD~dgdG~Is~~EL~~~L~-~lG 248 (286)
+|+.+|..||.+++|+|+..||+.+|+ .+|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 478899999999999999999999999 576
No 44
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.84 E-value=5e-05 Score=74.63 Aligned_cols=54 Identities=15% Similarity=0.163 Sum_probs=48.3
Q ss_pred CHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 216 TEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 216 ~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
....+..+|+.||.+++|+|+..||.. +..||..+|.|+||.|+|+||..++..
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 446789999999999999999999842 578999999999999999999998865
No 45
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.80 E-value=2.7e-05 Score=74.13 Aligned_cols=94 Identities=17% Similarity=0.117 Sum_probs=72.1
Q ss_pred CccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Q 023146 185 PTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFD 264 (286)
Q Consensus 185 ~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D 264 (286)
..|.|++|.|++.||++-|...............+-...|..+|+|++|+++..||+.-+.-.+......+...||-..|
T Consensus 208 d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD 287 (325)
T KOG4223|consen 208 DIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEAD 287 (325)
T ss_pred hcccCCCCceeHHHHHhHHhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhc
Confidence 57889999999999998776532110000111123345667779999999999999988777777788899999999999
Q ss_pred CCCCCcccHHHHHH
Q 023146 265 SDGDGKLNLEDFQK 278 (286)
Q Consensus 265 ~D~DG~IdyeEFv~ 278 (286)
.|+||+++++|.+.
T Consensus 288 ~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 288 EDKDGKLSKEEILE 301 (325)
T ss_pred cCccccccHHHHhh
Confidence 99999999998764
No 46
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=97.77 E-value=5.7e-05 Score=74.81 Aligned_cols=65 Identities=23% Similarity=0.385 Sum_probs=59.2
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHc----CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAH----DFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~l----G~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..|..+|+.+|.|++|.|+.+||+.+...+ ...+++++|.++.+.+|.++||.|+++||+..+.-
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 467889999999999999999999998865 57889999999999999999999999999988753
No 47
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.65 E-value=0.00011 Score=51.39 Aligned_cols=51 Identities=24% Similarity=0.273 Sum_probs=43.2
Q ss_pred CcccchHHhHHHhhhhhhhhhccc-CCHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 023146 191 KGIACGRENTGMGKRKKSFTARVK-MTEDEVILHFFQFNDAEKGSISLRDLRRVSVA 246 (286)
Q Consensus 191 ~G~Idf~EFl~~~k~k~~~~~~~~-~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~ 246 (286)
+|.|+..+|..++ .... .. .+..++..+|..||.+++|+|+..||..+|..
T Consensus 2 ~G~i~~~~~~~~l-~~~g----~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 2 DGKITREEFRRAL-SKLG----IKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSEEEHHHHHHHH-HHTT----SSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred cCEECHHHHHHHH-HHhC----CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 6899999998888 3222 24 77889999999999999999999999998864
No 48
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.65 E-value=0.00018 Score=58.43 Aligned_cols=62 Identities=24% Similarity=0.331 Sum_probs=55.1
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
...+..+|..+|. ++|+|+....+.+|...| |+.+.+..|+.-.|.+++|+++++||+-+|.
T Consensus 9 ~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 9 KQKYDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp HHHHHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence 4578889999885 689999999999999887 8889999999999999999999999998775
No 49
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.56 E-value=0.00023 Score=64.69 Aligned_cols=67 Identities=18% Similarity=0.242 Sum_probs=59.7
Q ss_pred CHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc-CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 216 TEDEVILHFFQFNDAEKGSISLRDLRRVSVAH-DFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 216 ~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l-G~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
+...+...|...|+++.|+|+.+||+.+|... ...++.+.|+-||..||.+..|+|+|.||..++..
T Consensus 55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~ 122 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY 122 (221)
T ss_pred ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence 34578889999999999999999999999865 46788999999999999999999999999998764
No 50
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=97.55 E-value=9.9e-05 Score=53.33 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=44.0
Q ss_pred ccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 023146 186 TQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVS 244 (286)
Q Consensus 186 ~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L 244 (286)
.|.+++|.|+..||..++....... ........+..+|+.+|.+++|.|+..||..++
T Consensus 9 ~D~d~~G~i~~~el~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 9 FDKDGDGYISKEELRRALKHLGRDM-SDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HSTTSSSEEEHHHHHHHHHHTTSHS-THHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HcCCccCCCCHHHHHHHHHHhcccc-cHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 5788999999999998876532110 012233567778999999999999999998875
No 51
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.46 E-value=0.00031 Score=69.06 Aligned_cols=67 Identities=13% Similarity=0.270 Sum_probs=60.5
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCC-CCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFI-WTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~-LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
+..++.+|..||.+++|+|+..+|.+.|..++.+ ....-+..++..+|.|.||.++|.+|.+.+...
T Consensus 13 ~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~ 80 (463)
T KOG0036|consen 13 DIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK 80 (463)
T ss_pred HHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh
Confidence 3578899999999999999999999999999877 667778889999999999999999999998654
No 52
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.27 E-value=0.0008 Score=48.10 Aligned_cols=49 Identities=16% Similarity=0.360 Sum_probs=40.7
Q ss_pred cccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 234 SISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 234 ~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
.++..|++.+|+.+++.+.+..+..+|+.+|.+++|.++.+||..++..
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 3678999999999999999999999999999999999999999998864
No 53
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=97.17 E-value=0.0023 Score=57.07 Aligned_cols=84 Identities=15% Similarity=0.201 Sum_probs=69.2
Q ss_pred CCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCc-ccHHHHHHHHHHcCCCCCHH-HHHHHHHHhcCCC
Q 023146 190 KKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGS-ISLRDLRRVSVAHDFIWTDD-ELFDMIHCFDSDG 267 (286)
Q Consensus 190 ~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~-Is~~EL~~~L~~lG~~Ltde-Ev~~mI~~~D~D~ 267 (286)
+.|.|+..+|..+...... --..++|..|+.+++|. |+..++..+|..+-.+-+.. .++-.|+.+|.++
T Consensus 47 ~~g~lt~eef~~i~~~~~N---------p~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~ 117 (187)
T KOG0034|consen 47 GDGYLTKEEFLSIPELALN---------PLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDG 117 (187)
T ss_pred ccCccCHHHHHHHHHHhcC---------cHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCC
Confidence 7899999999877633221 13466788888888888 99999999999987665555 8888999999999
Q ss_pred CCcccHHHHHHHHHh
Q 023146 268 DGKLNLEDFQKIVSR 282 (286)
Q Consensus 268 DG~IdyeEFv~ll~~ 282 (286)
+|.|+.++|..+|..
T Consensus 118 ~G~I~reel~~iv~~ 132 (187)
T KOG0034|consen 118 DGFISREELKQILRM 132 (187)
T ss_pred CCcCcHHHHHHHHHH
Confidence 999999999998864
No 54
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.17 E-value=0.00072 Score=64.60 Aligned_cols=127 Identities=17% Similarity=0.138 Sum_probs=86.9
Q ss_pred cCccchhcccCCHHHHHHHHHhhcCCCccCc-----CCccCCCCcccchHHhHHHhhhhhhhhhc-----ccCCH----H
Q 023146 153 LSSSDCVAAAADDDELMQAIALSLQPSEELS-----APTQNGKKGIACGRENTGMGKRKKSFTAR-----VKMTE----D 218 (286)
Q Consensus 153 ~~~~~~~~~~~dd~eL~qAialsL~~s~~~s-----~~~d~d~~G~Idf~EFl~~~k~k~~~~~~-----~~~~e----e 218 (286)
...-+++ +..||+.=|..+.+.....- ...+.+.+|.|+|.+++..+......... ...+. .
T Consensus 88 ~~~Dgfv----~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~~~km~~ 163 (325)
T KOG4223|consen 88 SDSDGFV----TESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNEEYKKMIA 163 (325)
T ss_pred CCCCCce----eHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchhcHHHHHHHH
Confidence 4444555 47788877766654332221 45678899999999998776642110000 00011 2
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHc-CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 219 EVILHFFQFNDAEKGSISLRDLRRVSVAH-DFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 219 eL~~aF~~fD~dgdG~Is~~EL~~~L~~l-G~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
.-...|+.-|.|++|.+|..||...|.-- ...|..--|.+.+..+|.|+||.|+|+||+.-|...
T Consensus 164 rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~ 229 (325)
T KOG4223|consen 164 RDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSH 229 (325)
T ss_pred HHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhc
Confidence 34567999999999999999998776532 345556677888899999999999999999877653
No 55
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.10 E-value=0.00048 Score=41.90 Aligned_cols=23 Identities=30% Similarity=0.534 Sum_probs=12.7
Q ss_pred HHHhhhhcCCCCCcccHHHHHHH
Q 023146 221 ILHFFQFNDAEKGSISLRDLRRV 243 (286)
Q Consensus 221 ~~aF~~fD~dgdG~Is~~EL~~~ 243 (286)
+.+|..+|.|++|.|+..||..+
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 34555555555555555555543
No 56
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.08 E-value=0.00086 Score=66.42 Aligned_cols=90 Identities=18% Similarity=0.253 Sum_probs=63.2
Q ss_pred ccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHH------cCC--------CC
Q 023146 186 TQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVA------HDF--------IW 251 (286)
Q Consensus 186 ~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~------lG~--------~L 251 (286)
.+.+.+|.|+|.+|+=++.. ...++..+.-||++||.||+|-|+.+||..++.- +|. ..
T Consensus 208 ~~lg~~GLIsfSdYiFLlTl-------LS~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~ 280 (489)
T KOG2643|consen 208 YKLGESGLISFSDYIFLLTL-------LSIPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGN 280 (489)
T ss_pred EEcCCCCeeeHHHHHHHHHH-------HccCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccc
Confidence 46678899999999755533 1345667889999999999999999999888742 121 11
Q ss_pred CHH-HHHH--HHHHhcCCCCCcccHHHHHHHHHh
Q 023146 252 TDD-ELFD--MIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 252 tde-Ev~~--mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
+-. ++.. +..-|-.++++++++++|+.++..
T Consensus 281 s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~ 314 (489)
T KOG2643|consen 281 SFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQEN 314 (489)
T ss_pred eehhhhhhhHHHHhhccCCCccccHHHHHHHHHH
Confidence 111 2222 222357888999999999988764
No 57
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=97.06 E-value=0.001 Score=67.16 Aligned_cols=65 Identities=18% Similarity=0.339 Sum_probs=57.4
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCC---CHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIW---TDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~L---tdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..++...|...| +++|+|+..+|..++...+..+ ..++++.++...++|.+|.|+|++|+.++..
T Consensus 18 l~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 18 LRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN 85 (627)
T ss_pred HHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence 457888999999 9999999999999999976544 5789999999999999999999999997753
No 58
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.97 E-value=0.00091 Score=40.65 Aligned_cols=25 Identities=52% Similarity=0.987 Sum_probs=22.7
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHH
Q 023146 256 LFDMIHCFDSDGDGKLNLEDFQKIV 280 (286)
Q Consensus 256 v~~mI~~~D~D~DG~IdyeEFv~ll 280 (286)
|+.+|..+|.|+||.|++.||..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4679999999999999999999875
No 59
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=96.95 E-value=0.0015 Score=72.36 Aligned_cols=73 Identities=16% Similarity=0.364 Sum_probs=62.6
Q ss_pred hcccCCH---HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCC--HH-----HHHHHHHHhcCCCCCcccHHHHHHHH
Q 023146 211 ARVKMTE---DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWT--DD-----ELFDMIHCFDSDGDGKLNLEDFQKIV 280 (286)
Q Consensus 211 ~~~~~~e---eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~Lt--de-----Ev~~mI~~~D~D~DG~IdyeEFv~ll 280 (286)
+....++ .++.-+|++||++.+|.++..+|+.||+.+|..++ ++ ++..++..+|++.+|+|+..+|+.+|
T Consensus 2243 n~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afm 2322 (2399)
T KOG0040|consen 2243 NHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFM 2322 (2399)
T ss_pred ccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHH
Confidence 3344555 46777999999999999999999999999997663 34 79999999999999999999999999
Q ss_pred Hhc
Q 023146 281 SRC 283 (286)
Q Consensus 281 ~~~ 283 (286)
...
T Consensus 2323 i~~ 2325 (2399)
T KOG0040|consen 2323 ISK 2325 (2399)
T ss_pred Hhc
Confidence 764
No 60
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=96.93 E-value=0.0023 Score=50.29 Aligned_cols=61 Identities=7% Similarity=-0.039 Sum_probs=46.7
Q ss_pred CCCCc-ccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcC
Q 023146 188 NGKKG-IACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHD 248 (286)
Q Consensus 188 ~d~~G-~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG 248 (286)
.+++| +|+..|+..++.......-....+..+|..+|..+|.+++|.|+..+|..+|..+.
T Consensus 22 ~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 22 KEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred cCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 56888 69999999888652210001133567899999999999999999999999988763
No 61
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=96.90 E-value=0.0015 Score=62.81 Aligned_cols=96 Identities=16% Similarity=0.076 Sum_probs=76.9
Q ss_pred CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHh
Q 023146 184 APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCF 263 (286)
Q Consensus 184 ~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~ 263 (286)
+..|.+..|.++|.|..... ...+....+..-|+-+|+.|+.+.+|+|+..+|.-+|... ..+..-.+-.+|..+
T Consensus 266 ~LFde~~tg~~D~re~v~~l----avlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~-lgv~~l~v~~lf~~i 340 (412)
T KOG4666|consen 266 MLFDEGTTGNGDYRETVKTL----AVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVV-LGVEVLRVPVLFPSI 340 (412)
T ss_pred heecCCCCCcccHHHHhhhh----eeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHh-cCcceeeccccchhh
Confidence 34566778999999986433 2344557788899999999999999999999999888873 224455677899999
Q ss_pred cCCCCCcccHHHHHHHHHhcC
Q 023146 264 DSDGDGKLNLEDFQKIVSRCN 284 (286)
Q Consensus 264 D~D~DG~IdyeEFv~ll~~~~ 284 (286)
+...+|+|.|.+|..++...+
T Consensus 341 ~q~d~~ki~~~~f~~fa~~~p 361 (412)
T KOG4666|consen 341 EQKDDPKIYASNFRKFAATEP 361 (412)
T ss_pred hcccCcceeHHHHHHHHHhCc
Confidence 999999999999999987653
No 62
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.88 E-value=0.00041 Score=56.92 Aligned_cols=60 Identities=17% Similarity=0.317 Sum_probs=45.0
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHH
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQK 278 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ 278 (286)
...+.+.|..+|.+++|+|+..||..+...| .....=+..++...|.|+||.|++.|+..
T Consensus 53 ~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 53 KRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 4678899999999999999999999877655 23344578899999999999999999975
No 63
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.85 E-value=0.0013 Score=51.45 Aligned_cols=67 Identities=7% Similarity=0.051 Sum_probs=49.4
Q ss_pred ccC-CC-CcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCC
Q 023146 186 TQN-GK-KGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWT 252 (286)
Q Consensus 186 ~d~-d~-~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~Lt 252 (286)
.+. ++ +|.|+..|+..++.......-....+..++..+|..+|.+++|.|+..+|..++..++..+.
T Consensus 17 ~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~~~~ 85 (94)
T cd05031 17 YAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSIACE 85 (94)
T ss_pred HhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHH
Confidence 344 65 69999999988875311100012446789999999999999999999999999988765443
No 64
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=96.84 E-value=0.0021 Score=50.44 Aligned_cols=63 Identities=5% Similarity=0.044 Sum_probs=51.0
Q ss_pred ccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc-----CCCCCHHH
Q 023146 186 TQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH-----DFIWTDDE 255 (286)
Q Consensus 186 ~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l-----G~~LtdeE 255 (286)
.+.+++|.|++.++..++... ..+..++..+|..+|.+++|+|+..+|..+|..+ |.+++.+-
T Consensus 19 ~D~d~~G~Is~~el~~~l~~~-------~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~~g~~~~~~~ 86 (96)
T smart00027 19 LDKNQDGTVTGAQAKPILLKS-------GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLNGYPIPASL 86 (96)
T ss_pred hCCCCCCeEeHHHHHHHHHHc-------CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHHcCCCCCccC
Confidence 466789999999998887541 3567889999999999999999999999988753 66666543
No 65
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=96.84 E-value=0.0033 Score=44.82 Aligned_cols=56 Identities=7% Similarity=0.086 Sum_probs=46.3
Q ss_pred CccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 185 PTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 185 ~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
..+.+++|.|+..++..++... ..+...+..+|..+|.+++|.|+..++..++..+
T Consensus 7 ~~D~~~~G~i~~~el~~~l~~~-------g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 7 SLDPDGDGLISGDEARPFLGKS-------GLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred HhCCCCCCcCcHHHHHHHHHHc-------CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 3567889999999998776541 2367789999999999999999999999888654
No 66
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=96.76 E-value=0.0021 Score=50.68 Aligned_cols=57 Identities=7% Similarity=0.066 Sum_probs=46.1
Q ss_pred cC-CCCcccchHHhHHHhhhhhhhhhcccCCH-HHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 187 QN-GKKGIACGRENTGMGKRKKSFTARVKMTE-DEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 187 d~-d~~G~Idf~EFl~~~k~k~~~~~~~~~~e-eeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
+. +++|.|+..||..++..-.. ...+. .++..+|+.+|.|++|.|+..||..+|..+
T Consensus 18 d~~~~~g~i~~~ELk~ll~~elg----~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 18 SVKGGKESLTASEFQELLTQQLP----HLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred hCCCCCCeECHHHHHHHHHHHhh----hhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 44 78999999999988865221 12333 789999999999999999999999988775
No 67
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=96.66 E-value=0.0052 Score=41.49 Aligned_cols=54 Identities=13% Similarity=0.159 Sum_probs=44.2
Q ss_pred ccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 023146 186 TQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVS 244 (286)
Q Consensus 186 ~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L 244 (286)
.+.+++|.|++.+|..++... ....+...+..+|..+|.+++|.|+..+|..++
T Consensus 9 ~d~~~~g~l~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 9 FDKDGDGTISADELKAALKSL-----GEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred hCCCCCCcCcHHHHHHHHHHh-----CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 456788999999998877642 125567889999999999999999999998765
No 68
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=96.63 E-value=0.0053 Score=48.21 Aligned_cols=61 Identities=3% Similarity=-0.028 Sum_probs=46.4
Q ss_pred cCCCCc-ccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 187 QNGKKG-IACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 187 d~d~~G-~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
+.+++| .|+..||..++.......-.......++..+|+.+|.+++|.|+.++|..++..+
T Consensus 20 ~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 20 GKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred ccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 345554 9999999988876432111123456789999999999999999999999988775
No 69
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.62 E-value=0.0025 Score=40.03 Aligned_cols=27 Identities=33% Similarity=0.704 Sum_probs=24.3
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 255 ELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 255 Ev~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
+++.+|..+|.|++|.|+++||..+|.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 478899999999999999999999997
No 70
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=96.51 E-value=0.0055 Score=47.69 Aligned_cols=62 Identities=8% Similarity=0.159 Sum_probs=46.4
Q ss_pred ccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 186 TQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 186 ~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
.+.+.+|.|+..||..++...............++..+|..+|.+++|.|+.++|..++..+
T Consensus 19 ~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 19 VRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred ccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 34446899999999988864221100012337899999999999999999999999988765
No 71
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=96.51 E-value=0.0071 Score=47.00 Aligned_cols=64 Identities=9% Similarity=0.070 Sum_probs=48.2
Q ss_pred Ccc-CCCCc-ccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcC
Q 023146 185 PTQ-NGKKG-IACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHD 248 (286)
Q Consensus 185 ~~d-~d~~G-~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG 248 (286)
..+ .+++| .|+..+|..++.......-....+..++..+|..+|.+++|.|+..+|..++..+.
T Consensus 17 ~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 17 AHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 444 78899 59999999888542211001134678899999999999999999999999887653
No 72
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=96.50 E-value=0.0066 Score=46.48 Aligned_cols=62 Identities=8% Similarity=0.056 Sum_probs=46.9
Q ss_pred ccC--CCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 186 TQN--GKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 186 ~d~--d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
.+. +++|.|++.+|..++............+..++..+|..||.+++|.|+..+|..+|..+
T Consensus 17 ~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 17 YSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 355 68999999999888754111100012357889999999999999999999999988765
No 73
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=96.42 E-value=0.0038 Score=62.01 Aligned_cols=51 Identities=20% Similarity=0.231 Sum_probs=32.6
Q ss_pred ccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 023146 186 TQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSV 245 (286)
Q Consensus 186 ~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~ 245 (286)
.-.++++++++.+|+..+... + .+-+.--|..||+..+|.|+..+|..+|-
T Consensus 295 FG~rg~~kLs~deF~~F~e~L-q--------~Eil~lEF~~~~~~~~g~Ise~DFA~~lL 345 (489)
T KOG2643|consen 295 FGKRGNGKLSIDEFLKFQENL-Q--------EEILELEFERFDKGDSGAISEVDFAELLL 345 (489)
T ss_pred hccCCCccccHHHHHHHHHHH-H--------HHHHHHHHHHhCcccccccCHHHHHHHHH
Confidence 346789999999998877542 1 22333346666666666666666655543
No 74
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.30 E-value=0.0043 Score=35.70 Aligned_cols=26 Identities=15% Similarity=0.336 Sum_probs=13.5
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHH
Q 023146 220 VILHFFQFNDAEKGSISLRDLRRVSV 245 (286)
Q Consensus 220 L~~aF~~fD~dgdG~Is~~EL~~~L~ 245 (286)
+..+|..||.+++|+|+..+|..++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 34455555555555555555555544
No 75
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=96.30 E-value=0.011 Score=46.25 Aligned_cols=57 Identities=9% Similarity=0.133 Sum_probs=45.6
Q ss_pred CCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcC
Q 023146 190 KKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHD 248 (286)
Q Consensus 190 ~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG 248 (286)
.+|.|+..||..++...... ....+..++..+|+.+|.+++|.|+..+|..++..+.
T Consensus 25 ~~g~Is~~EL~~~l~~~~~l--g~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 25 DKNTLSKKELKELIQKELTI--GSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred CCCEECHHHHHHHHHHHHhc--CCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 38899999999888542111 1245788999999999999999999999998887653
No 76
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=96.21 E-value=0.014 Score=45.68 Aligned_cols=60 Identities=7% Similarity=-0.048 Sum_probs=46.8
Q ss_pred CCCCc-ccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 188 NGKKG-IACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 188 ~d~~G-~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
.+++| .|+..+|..++.......-....+..++..+|+.+|.+++|.|+.++|..++..+
T Consensus 20 ~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 20 REGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred cCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 57899 6999999988865221111224577889999999999999999999998887654
No 77
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=96.10 E-value=0.011 Score=48.83 Aligned_cols=52 Identities=17% Similarity=0.114 Sum_probs=42.7
Q ss_pred CccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 023146 185 PTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSV 245 (286)
Q Consensus 185 ~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~ 245 (286)
..|.+++|.|+..|...++ . ...+..+...|..+|.+++|+||..|+..+|.
T Consensus 56 ~lD~d~DG~Ls~~EL~~~~-l--------~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 56 QLDGNYDGKLSHHELAPIR-L--------DPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHCCCCCCcCCHHHHHHHH-c--------cchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 3477889999999997654 1 23356788899999999999999999999983
No 78
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.07 E-value=0.016 Score=48.37 Aligned_cols=66 Identities=21% Similarity=0.278 Sum_probs=50.2
Q ss_pred cCCHHHHHH-HhhhhcCCCCCcccHHHHHHHHHHc------C----CCCCHHHHHHHHHH----hcCCCCCcccHHHHHH
Q 023146 214 KMTEDEVIL-HFFQFNDAEKGSISLRDLRRVSVAH------D----FIWTDDELFDMIHC----FDSDGDGKLNLEDFQK 278 (286)
Q Consensus 214 ~~~eeeL~~-aF~~fD~dgdG~Is~~EL~~~L~~l------G----~~LtdeEv~~mI~~----~D~D~DG~IdyeEFv~ 278 (286)
.++.++++- .|.+.|.|++|+|+--||..+++-. | .-+++.++..||.. -|.++||.|+|-||+.
T Consensus 62 ~mtpeqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 62 KMTPEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hCCHHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 345556654 6888899999999999999999864 2 22345677776665 4788999999999986
Q ss_pred H
Q 023146 279 I 279 (286)
Q Consensus 279 l 279 (286)
.
T Consensus 142 ~ 142 (144)
T KOG4065|consen 142 R 142 (144)
T ss_pred h
Confidence 4
No 79
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.01 E-value=0.0084 Score=34.40 Aligned_cols=28 Identities=39% Similarity=0.838 Sum_probs=25.0
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 255 ELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 255 Ev~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
++..+|..+|.+++|.|++.+|..++..
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 3678999999999999999999999864
No 80
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=95.92 E-value=0.017 Score=43.95 Aligned_cols=64 Identities=23% Similarity=0.396 Sum_probs=53.8
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHc-CC-CCCHHHHHHHHHHhcCC----CCCcccHHHHHHHHHhc
Q 023146 219 EVILHFFQFNDAEKGSISLRDLRRVSVAH-DF-IWTDDELFDMIHCFDSD----GDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 219 eL~~aF~~fD~dgdG~Is~~EL~~~L~~l-G~-~LtdeEv~~mI~~~D~D----~DG~IdyeEFv~ll~~~ 283 (286)
+|..+|..|-. +.++||..+|...|..- +. .++...+..||..+.++ ..+.|+++.|..+|...
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 57889999955 78999999999999875 44 67999999999998655 46899999999999763
No 81
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=95.46 E-value=0.028 Score=56.87 Aligned_cols=57 Identities=14% Similarity=0.163 Sum_probs=44.9
Q ss_pred CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 184 APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 184 ~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
+..|..++|.|+|+||+..-... -.+..-...+|..||+.++|.|+.+++..++...
T Consensus 81 ~iaD~tKDglisf~eF~afe~~l-------C~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t 137 (694)
T KOG0751|consen 81 SIADQTKDGLISFQEFRAFESVL-------CAPDALFEVAFQLFDRLGNGEVSFEDVADIFGQT 137 (694)
T ss_pred hhhhhcccccccHHHHHHHHhhc-------cCchHHHHHHHHHhcccCCCceehHHHHHHHhcc
Confidence 45567788999999997654331 1224567889999999999999999999999875
No 82
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=94.61 E-value=0.048 Score=53.82 Aligned_cols=66 Identities=18% Similarity=0.094 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHhhcC--CCccCc--------CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCC
Q 023146 163 ADDDELMQAIALSLQ--PSEELS--------APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEK 232 (286)
Q Consensus 163 ~dd~eL~qAialsL~--~s~~~s--------~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgd 232 (286)
.|...|.+.|+..|+ .+.... ...|.+++|.|++.||+. +..+|..||.|++
T Consensus 310 ~d~~~L~~~i~~~~~~~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~------------------~~~~F~~~D~d~D 371 (391)
T PRK12309 310 KALETLEKLLAHRLARLEGGEAFTHAAQEIFRLYDLDGDGFITREEWLG------------------SDAVFDALDLNHD 371 (391)
T ss_pred HHHHHHHHHHHHHHHHhhccChhhHHHHHHHHHhCCCCCCcCcHHHHHH------------------HHHHHHHhCCCCC
Confidence 345666666654433 111111 567899999999999942 3567999999999
Q ss_pred CcccHHHHHHHHHH
Q 023146 233 GSISLRDLRRVSVA 246 (286)
Q Consensus 233 G~Is~~EL~~~L~~ 246 (286)
|.|+..||..+|..
T Consensus 372 G~Is~eEf~~~~~~ 385 (391)
T PRK12309 372 GKITPEEMRAGLGA 385 (391)
T ss_pred CCCcHHHHHHHHHH
Confidence 99999999998865
No 83
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.35 E-value=0.04 Score=58.27 Aligned_cols=66 Identities=20% Similarity=0.247 Sum_probs=58.7
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhcC
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRCN 284 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~~ 284 (286)
...+..+|..+|+..+||+|-..-+.+|...+ |+...+-.|..-.|+|+||+++.+||+-.|.-|.
T Consensus 194 klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~--Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~lie 259 (1118)
T KOG1029|consen 194 KLKYRQLFNALDKTRSGYLSGQQARSALGQSG--LPQNQLAHIWTLSDVDGDGKLSADEFILAMHLIE 259 (1118)
T ss_pred hhHHHHHhhhcccccccccccHHHHHHHHhcC--CchhhHhhheeeeccCCCCcccHHHHHHHHHHHH
Confidence 35678899999999999999999999998876 7788889999999999999999999998886553
No 84
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=94.07 E-value=0.035 Score=51.92 Aligned_cols=65 Identities=15% Similarity=0.298 Sum_probs=48.7
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHH-cCCCC--CHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVA-HDFIW--TDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~-lG~~L--tdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..|..+|...|.+.+|+|+..++++-++. +...+ .-++-.-.|+.+|+|+||.|+|++|..-+..
T Consensus 101 rklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFla 168 (362)
T KOG4251|consen 101 RKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLA 168 (362)
T ss_pred HHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHh
Confidence 57889999999999999999999887654 22111 1123344677889999999999999765543
No 85
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=93.67 E-value=0.17 Score=50.91 Aligned_cols=84 Identities=15% Similarity=0.172 Sum_probs=58.7
Q ss_pred CCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHH-------cC-CCCC-HHHHHHHH
Q 023146 190 KKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVA-------HD-FIWT-DDELFDMI 260 (286)
Q Consensus 190 ~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~-------lG-~~Lt-deEv~~mI 260 (286)
..|.|+|.+|+-..-. . ....+...|.-.|+++|.+++|+|+..+|+..... +| ..++ ++-+.+|+
T Consensus 328 ~eGrmdykdFv~FilA-~----e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~ 402 (493)
T KOG2562|consen 328 VEGRMDYKDFVDFILA-E----EDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIR 402 (493)
T ss_pred ecCcccHHHHHHHHHH-h----ccCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHH
Confidence 4566888887654321 0 11234457888999999999999999999877554 22 3333 34456677
Q ss_pred HHhcCCCCCcccHHHHHH
Q 023146 261 HCFDSDGDGKLNLEDFQK 278 (286)
Q Consensus 261 ~~~D~D~DG~IdyeEFv~ 278 (286)
..+-+-..++|++.+|+.
T Consensus 403 DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 403 DMVKPEDENKITLQDLKG 420 (493)
T ss_pred HHhCccCCCceeHHHHhh
Confidence 777777788999999986
No 86
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=93.12 E-value=0.29 Score=39.02 Aligned_cols=59 Identities=8% Similarity=0.019 Sum_probs=46.2
Q ss_pred CCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcC
Q 023146 190 KKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHD 248 (286)
Q Consensus 190 ~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG 248 (286)
..++++-.||..++..-....-........+..+|..+|.+++|.|+..|+..++..+.
T Consensus 20 ~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 20 EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 35689999999988765442222344567899999999999999999999998887653
No 87
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=92.40 E-value=0.17 Score=52.14 Aligned_cols=63 Identities=19% Similarity=0.358 Sum_probs=58.4
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 220 VILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 220 L~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
.+.-|..+|.+..|+++..++..+|...+..|+.+.++++++++|..-+|.+...+|.+++..
T Consensus 595 ~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~ 657 (680)
T KOG0042|consen 595 RKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSA 657 (680)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHH
Confidence 345688999999999999999999999999999999999999999999999999999998865
No 88
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=92.29 E-value=0.25 Score=49.65 Aligned_cols=64 Identities=16% Similarity=0.083 Sum_probs=52.8
Q ss_pred CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcC
Q 023146 184 APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHD 248 (286)
Q Consensus 184 ~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG 248 (286)
..+|+|++|.|++.||..+++...+-+ ....+..++..+-+.+|-+++|+|+..||..+++...
T Consensus 554 ~~iD~D~SG~isldEF~~a~~l~~sh~-~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvd 617 (631)
T KOG0377|consen 554 NIIDADNSGEISLDEFRTAWKLLSSHM-NGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVD 617 (631)
T ss_pred HHhccCCCCceeHHHHHHHHHHHHhhc-CCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhc
Confidence 678999999999999998886533222 2356678999999999999999999999999988654
No 89
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=92.20 E-value=0.07 Score=40.41 Aligned_cols=57 Identities=19% Similarity=0.184 Sum_probs=40.0
Q ss_pred CCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-------CCCcccHHHHHHH
Q 023146 215 MTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSD-------GDGKLNLEDFQKI 279 (286)
Q Consensus 215 ~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D-------~DG~IdyeEFv~l 279 (286)
.+.+++..+|+.+ .++.+|||..+|++.|.. +.+.-++..+..- .-|.++|..|+.-
T Consensus 3 ~s~eqv~~aFr~l-A~~KpyVT~~dLr~~l~p-------e~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~ 66 (69)
T PF08726_consen 3 DSAEQVEEAFRAL-AGGKPYVTEEDLRRSLTP-------EQAEYCISRMPPYEGPDGDAIPGAYDYESFTNS 66 (69)
T ss_dssp STCHHHHHHHHHH-CTSSSCEEHHHHHHHS-C-------CCHHHHHCCSEC--SSS----TTEEECHHHHCC
T ss_pred CCHHHHHHHHHHH-HcCCCcccHHHHHHHcCc-------HHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHH
Confidence 4567999999999 789999999999987532 3334455443222 1267999999854
No 90
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=91.97 E-value=0.26 Score=46.30 Aligned_cols=93 Identities=14% Similarity=0.112 Sum_probs=67.6
Q ss_pred CccCCCCcccchHHhHHHhhhhhhhhhcccCC-----HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHH
Q 023146 185 PTQNGKKGIACGRENTGMGKRKKSFTARVKMT-----EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDM 259 (286)
Q Consensus 185 ~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~-----eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~m 259 (286)
..+.+++..++..+|....-......+ .+.- ....+..=..+|.+.+|.+|.++|...+--+.+.++..++..|
T Consensus 244 dlDqdgDkqlSvpeFislpvGTVenqq-gqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~ 322 (362)
T KOG4251|consen 244 DLDQDGDKQLSVPEFISLPVGTVENQQ-GQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDI 322 (362)
T ss_pred HhccCCCeeecchhhhcCCCcchhhhh-ccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHH
Confidence 457778888888999754322111100 0111 1223333346699999999999999998888899999999999
Q ss_pred HHHhcCCCCCcccHHHHHH
Q 023146 260 IHCFDSDGDGKLNLEDFQK 278 (286)
Q Consensus 260 I~~~D~D~DG~IdyeEFv~ 278 (286)
+...|.+++.+++.++.+.
T Consensus 323 ma~~d~n~~~~Ls~eell~ 341 (362)
T KOG4251|consen 323 MALTDANNDEKLSLEELLE 341 (362)
T ss_pred HhhhccCCCcccCHHHHHH
Confidence 9999999999999998764
No 91
>PF14658 EF-hand_9: EF-hand domain
Probab=91.25 E-value=0.69 Score=34.79 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=47.3
Q ss_pred CccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCC-CcccHHHHHHHHHH
Q 023146 185 PTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEK-GSISLRDLRRVSVA 246 (286)
Q Consensus 185 ~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgd-G~Is~~EL~~~L~~ 246 (286)
.-|.++.|.|....+...+..- ......+.+|+.+...+|++|. |.|+.+.|..+|+.
T Consensus 6 ~fD~~~tG~V~v~~l~~~Lra~----~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 6 AFDTQKTGRVPVSDLITYLRAV----TGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred hcCCcCCceEeHHHHHHHHHHH----cCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 4577889999999988776542 1124567899999999999998 99999999999975
No 92
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=90.83 E-value=1 Score=39.89 Aligned_cols=66 Identities=15% Similarity=0.220 Sum_probs=54.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCC------------------------------------------------
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDF------------------------------------------------ 249 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~------------------------------------------------ 249 (286)
..|+.-..-||.|++|.|.+.|--..++++|.
T Consensus 7 T~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~ 86 (174)
T PF05042_consen 7 TVLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGA 86 (174)
T ss_pred cHHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCccc
Confidence 35677777889999999999998888887765
Q ss_pred -----CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 250 -----IWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 250 -----~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
.+..+.+++||..++..+.+.+++.|...|+...
T Consensus 87 YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~n 125 (174)
T PF05042_consen 87 YDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGN 125 (174)
T ss_pred cccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhc
Confidence 3445668899999998888889999999998764
No 93
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=90.43 E-value=0.69 Score=33.14 Aligned_cols=49 Identities=10% Similarity=0.125 Sum_probs=33.4
Q ss_pred cchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 194 ACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 194 Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
++|+|-..+.+. +. ......-...+|+..|..++|.+...|+...++.|
T Consensus 2 msf~Evk~lLk~-~N----I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 2 MSFKEVKKLLKM-MN----IEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp BEHHHHHHHHHH-TT--------HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHH-Hc----cCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 456665444433 22 35677888999999999999999999999887654
No 94
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=90.23 E-value=0.55 Score=50.72 Aligned_cols=67 Identities=18% Similarity=0.215 Sum_probs=57.9
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCH-----HHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTD-----DELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~Ltd-----eEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
..+|+..|..|+....|.+++.++..+|..+|...-. .++..|+...|.+.-|+++|.+|...|.+.
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~ 817 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLERE 817 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhh
Confidence 4789999999999999999999999999999987764 345566667788888999999999999774
No 95
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=89.13 E-value=0.62 Score=52.44 Aligned_cols=58 Identities=24% Similarity=0.448 Sum_probs=51.2
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 223 HFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 223 aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
.|+.||+||.|.|+..+|..+|... ...|+.++.-++.+...|.+..++|++|+.-+.
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~-k~ytqse~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGH-KHYTQSEIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhcc-ccchhHHHHHHHHhhccCccccccHHHHHHHhc
Confidence 4777899999999999999999875 457899999999999999999999999997653
No 96
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=89.00 E-value=0.43 Score=46.61 Aligned_cols=62 Identities=11% Similarity=0.223 Sum_probs=52.8
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
.++-++|..+|.+.+|.++..||+.+-.-- .+.=|..+|...|...||.|+-+|++..+.+.
T Consensus 250 ds~gWMFnklD~N~Dl~Ld~sEl~~I~ldk----nE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~ 311 (434)
T KOG3555|consen 250 DSLGWMFNKLDTNYDLLLDQSELRAIELDK----NEACIKPFFNSCDTYKDGSISTNEWCYCFQKS 311 (434)
T ss_pred hhhhhhhhccccccccccCHHHhhhhhccC----chhHHHHHHhhhcccccCccccchhhhhhccC
Confidence 689999999999999999999998765332 23447889999999999999999999887664
No 97
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.92 E-value=0.85 Score=46.57 Aligned_cols=62 Identities=21% Similarity=0.224 Sum_probs=55.1
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
+.+.+.|+.+-.|-.|+|+-.--+..+++.- |+-.|+..|+...|.|.||.+++.||+..|.
T Consensus 231 eYYvnQFrtvQpDp~gfisGsaAknFFtKSk--lpi~ELshIWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 231 EYYVNQFRTVQPDPHGFISGSAAKNFFTKSK--LPIEELSHIWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHHHhhhhcccCCcccccccHHHHhhhhhcc--CchHHHHHHHhhcccCccccccHHHHHhhHh
Confidence 4567789999999999999999898888854 7779999999999999999999999998774
No 98
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=88.83 E-value=1.5 Score=40.13 Aligned_cols=90 Identities=13% Similarity=0.125 Sum_probs=64.7
Q ss_pred CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc--CCCCCHHHHHHHHH
Q 023146 184 APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH--DFIWTDDELFDMIH 261 (286)
Q Consensus 184 ~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l--G~~LtdeEv~~mI~ 261 (286)
..+|.+.+|.|++.|...||.+ +.. ..+.--++.+.+..|.|.+|+|+..++--|++.. |+--.+..+..+-+
T Consensus 106 k~yDe~rDgfIdl~ELK~mmEK-Lga----pQTHL~lK~mikeVded~dgklSfreflLIfrkaaagEL~~ds~~~~LAr 180 (244)
T KOG0041|consen 106 KQYDEDRDGFIDLMELKRMMEK-LGA----PQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGELQEDSGLLRLAR 180 (244)
T ss_pred HHhcccccccccHHHHHHHHHH-hCC----chhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhccccccchHHHHHHH
Confidence 4678899999999999877765 221 3455678899999999999999999988888763 44333455555555
Q ss_pred H--hcCCCCCcccHHHHHH
Q 023146 262 C--FDSDGDGKLNLEDFQK 278 (286)
Q Consensus 262 ~--~D~D~DG~IdyeEFv~ 278 (286)
. +|+..-|...-..|..
T Consensus 181 ~~eVDVskeGV~GAknFFe 199 (244)
T KOG0041|consen 181 LSEVDVSKEGVSGAKNFFE 199 (244)
T ss_pred hcccchhhhhhhhHHHHHH
Confidence 4 6777666555555543
No 99
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=88.67 E-value=1.8 Score=37.18 Aligned_cols=60 Identities=12% Similarity=0.237 Sum_probs=46.3
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHHcC---CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 223 HFFQFNDAEKGSISLRDLRRVSVAHD---FIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 223 aF~~fD~dgdG~Is~~EL~~~L~~lG---~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
+|..|-..+...++...|..+|+..+ ..+|...+.-+|..+-..+...|+|++|+.+|..
T Consensus 7 ~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 7 AFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAE 69 (154)
T ss_dssp HHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHH
T ss_pred HHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHH
Confidence 34444556667899999999999864 5799999999999987777778999999998854
No 100
>PLN02952 phosphoinositide phospholipase C
Probab=87.73 E-value=3.4 Score=43.15 Aligned_cols=90 Identities=21% Similarity=0.161 Sum_probs=62.9
Q ss_pred CCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcC--CCCCHHHHHHHHHHhc---
Q 023146 190 KKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHD--FIWTDDELFDMIHCFD--- 264 (286)
Q Consensus 190 ~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG--~~LtdeEv~~mI~~~D--- 264 (286)
+.|.++|.+|....+..+. +....-.+|..+|..|-.+ .+.|+.++|...|.... ...+.+.+..||..+-
T Consensus 13 ~~g~l~f~~f~~f~~~~k~---~~~~~r~ei~~lf~~~~~~-~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~ 88 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKI---TEAEPPDDVKDVFCKFSVG-GGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRR 88 (599)
T ss_pred cCCCcCHHHHHHHHHHhcc---ccCCChHHHHHHHHHHhCC-CCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhc
Confidence 3578999999765443210 1123467999999999644 46899999999999863 2467788888876541
Q ss_pred ----CCCCCcccHHHHHHHHHhc
Q 023146 265 ----SDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 265 ----~D~DG~IdyeEFv~ll~~~ 283 (286)
.-..+.++++.|..+|...
T Consensus 89 ~~~~~~~~~~l~~~~F~~~l~s~ 111 (599)
T PLN02952 89 HHVTRYTRHGLNLDDFFHFLLYD 111 (599)
T ss_pred cccccccccCcCHHHHHHHHcCc
Confidence 1123469999999999753
No 101
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=85.87 E-value=0.53 Score=45.76 Aligned_cols=64 Identities=17% Similarity=0.228 Sum_probs=50.3
Q ss_pred HHHHHHhhhhcCCCCCcccHHHH---HHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 218 DEVILHFFQFNDAEKGSISLRDL---RRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL---~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
.-+.+.|..+|.+.++.|...|+ +.+|..-. -...=...|++..|.++|-.|++.|++..|...
T Consensus 333 Rvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s--~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~ 399 (421)
T KOG4578|consen 333 RVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKS--KPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVE 399 (421)
T ss_pred heeeeeeeeecccccCccchhhcchHHHHHHhhc--cHHHHhhhcchhcccCCCceecHHHHhhhhccc
Confidence 35778899999999999999994 45554422 223445789999999999999999999988653
No 102
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=85.33 E-value=1.6 Score=42.46 Aligned_cols=65 Identities=15% Similarity=0.127 Sum_probs=57.1
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHc-CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAH-DFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~l-G~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
+.+...|-+||.+++|.++..+....|..+ |...|..-|+--|+.|+.+.||.|.-.+|.-++..
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~ 324 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQV 324 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHH
Confidence 568889999999999999999877777664 78889999999999999999999999888877764
No 103
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=84.12 E-value=2.8 Score=47.93 Aligned_cols=81 Identities=15% Similarity=0.135 Sum_probs=52.3
Q ss_pred CccCCCCcccchHHhHHHhhhh-hhh-hhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc--CCCCCHHHHHHHH
Q 023146 185 PTQNGKKGIACGRENTGMGKRK-KSF-TARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH--DFIWTDDELFDMI 260 (286)
Q Consensus 185 ~~d~d~~G~Idf~EFl~~~k~k-~~~-~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l--G~~LtdeEv~~mI 260 (286)
-.|.+.+|.+++++|....+.. -.. +.....++.+|..+..+.|++.+|||+..+....|-.. -..++..+|...|
T Consensus 2261 hFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeNI~s~~eIE~Af 2340 (2399)
T KOG0040|consen 2261 HFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETENILSSEEIEDAF 2340 (2399)
T ss_pred HhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcccccccchHHHHHHH
Confidence 3578889999999996554321 000 11112233489999999999999999999977666543 2334445565555
Q ss_pred HHhcC
Q 023146 261 HCFDS 265 (286)
Q Consensus 261 ~~~D~ 265 (286)
+.++.
T Consensus 2341 raL~a 2345 (2399)
T KOG0040|consen 2341 RALDA 2345 (2399)
T ss_pred HHhhc
Confidence 55554
No 104
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=81.98 E-value=3.8 Score=33.17 Aligned_cols=50 Identities=8% Similarity=0.116 Sum_probs=39.1
Q ss_pred CCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 023146 190 KKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVA 246 (286)
Q Consensus 190 ~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~ 246 (286)
.+|.|+...-..++.+ ...+...|..++.+.|.+++|+++..||.-+|.-
T Consensus 22 ~~g~isg~~a~~~f~~-------S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 22 QDGKISGDQAREFFMK-------SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp STTEEEHHHHHHHHHH-------TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred CCCeEeHHHHHHHHHH-------cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 4688888877655432 2566789999999999999999999999988764
No 105
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=81.34 E-value=2.7 Score=40.83 Aligned_cols=61 Identities=16% Similarity=0.224 Sum_probs=46.3
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHH-----cCCCCCHHHH-----------HHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 222 LHFFQFNDAEKGSISLRDLRRVSVA-----HDFIWTDDEL-----------FDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 222 ~aF~~fD~dgdG~Is~~EL~~~L~~-----lG~~LtdeEv-----------~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..|.+.|.+++|+++-.+|..+++. ....-.++++ ..+++.+|.+.|..|++++|++..-+
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhh
Confidence 4577889999999999999998875 2333333333 23677789999999999999986544
No 106
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=81.27 E-value=2.9 Score=42.35 Aligned_cols=56 Identities=20% Similarity=0.412 Sum_probs=33.2
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHH----hcCCCCCcccHHHHHHHHHh
Q 023146 224 FFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHC----FDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 224 F~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~----~D~D~DG~IdyeEFv~ll~~ 282 (286)
|..+|.|++|.|+.++|...-. ..+|.--|+.||.. +-.-.+|+|+|.+|+.++..
T Consensus 284 FweLD~Dhd~lidk~~L~ry~d---~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA 343 (493)
T KOG2562|consen 284 FWELDTDHDGLIDKEDLKRYGD---HTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILA 343 (493)
T ss_pred HhhhccccccccCHHHHHHHhc---cchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHH
Confidence 5556777777777777665442 33455556666663 23335666777776666643
No 107
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=79.11 E-value=2.2 Score=44.63 Aligned_cols=118 Identities=10% Similarity=0.009 Sum_probs=73.5
Q ss_pred hcCccchhcccCCHHHHHHHHHhhcCCCccCcCCccCCCCc---ccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhc
Q 023146 152 QLSSSDCVAAAADDDELMQAIALSLQPSEELSAPTQNGKKG---IACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFN 228 (286)
Q Consensus 152 ~~~~~~~~~~~~dd~eL~qAialsL~~s~~~s~~~d~d~~G---~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD 228 (286)
.+....++- ..|.+.|..++......-.......+.+..+ .|+|..|+.+......+ ..+..-+..+|+.+|
T Consensus 491 s~~~~~~lt-~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw----~~s~~~~~rlF~l~D 565 (671)
T KOG4347|consen 491 SVVQTTSLT-NTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPW----AVSLIFLERLFRLLD 565 (671)
T ss_pred hhcccCccC-HHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCch----hHHHHHHHHHHHhcc
Confidence 344444442 4666777776655422211111123333332 36666777776554333 244566888999999
Q ss_pred CCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHH
Q 023146 229 DAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLED 275 (286)
Q Consensus 229 ~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeE 275 (286)
..++|.|+..+|...|..+-..---+-+.-++..+|+.++ ..+-++
T Consensus 566 ~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~ 611 (671)
T KOG4347|consen 566 DSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREE 611 (671)
T ss_pred cCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-cccccc
Confidence 9999999999999999887544444666778888888877 655443
No 108
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=77.45 E-value=1.7 Score=35.47 Aligned_cols=51 Identities=18% Similarity=0.144 Sum_probs=33.9
Q ss_pred CccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHH
Q 023146 185 PTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRR 242 (286)
Q Consensus 185 ~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~ 242 (286)
..|.+++|.++-.|...+.... ...+..+...|...|.|++|.|+..|...
T Consensus 62 ~LD~n~d~~L~~~El~~l~~~l-------~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 62 QLDRNKDGVLDRSELKPLRRPL-------MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HH--T-SSEE-TTTTGGGGSTT-------STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhcCCCCCccCHHHHHHHHHHH-------hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 4577889999999986654321 23345688889999999999999999764
No 109
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=76.27 E-value=3.1 Score=36.40 Aligned_cols=60 Identities=18% Similarity=0.263 Sum_probs=45.9
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHHcCCCCC-HHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 223 HFFQFNDAEKGSISLRDLRRVSVAHDFIWT-DDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 223 aF~~fD~dgdG~Is~~EL~~~L~~lG~~Lt-deEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
+..+|-.||.|.++.+++..|+..+.+.-+ +-.+.-.|+.+|-|+|+.|--.+....+++
T Consensus 76 i~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~ 136 (189)
T KOG0038|consen 76 ICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTS 136 (189)
T ss_pred HHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHH
Confidence 445556899999999999999998764333 223455677789999999999888877754
No 110
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=75.40 E-value=19 Score=28.57 Aligned_cols=64 Identities=11% Similarity=0.063 Sum_probs=41.0
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHH-------cCC----CCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhcC
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVA-------HDF----IWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRCN 284 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~-------lG~----~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~~ 284 (286)
+.++-+|..+ .|.+|.|+..-|...|.. +|+ .-++.-++..|...- ..-.|+.+.|+..|...|
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~--~~~~I~~~~Fl~wl~~eP 77 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ--LSPKITENQFLDWLMSEP 77 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT--T-S-B-HHHHHHHHHT--
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC--CCCccCHHHHHHHHHhCC
Confidence 5678889988 688999999988877764 332 226677777777762 456799999999998754
No 111
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=74.31 E-value=4.8 Score=42.87 Aligned_cols=65 Identities=15% Similarity=0.220 Sum_probs=58.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
.-|..+|...|++.+|.++..+...++..+...+.+..+..+|++.+...+++|...+|+.+...
T Consensus 136 ~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~ 200 (746)
T KOG0169|consen 136 HWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKE 200 (746)
T ss_pred HHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHh
Confidence 45677899999999999999999999999999999999999999998889999999999887643
No 112
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=73.83 E-value=16 Score=37.69 Aligned_cols=94 Identities=15% Similarity=0.182 Sum_probs=61.1
Q ss_pred ccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHh-hhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Q 023146 186 TQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHF-FQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFD 264 (286)
Q Consensus 186 ~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF-~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D 264 (286)
.+.++...+.-..|+...-.. .+. .....++..+. .+-|...+|.|+.+|++..=..+. -++.-....|.-||
T Consensus 45 ~e~~ge~~mt~edFv~~ylgL---~~e-~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC--~pDal~~~aFqlFD 118 (694)
T KOG0751|consen 45 IEKNGESYMTPEDFVRRYLGL---YNE-SNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLC--APDALFEVAFQLFD 118 (694)
T ss_pred HhhccccccCHHHHHHHHHhh---ccc-ccCChHHHHHHHhhhhhcccccccHHHHHHHHhhcc--CchHHHHHHHHHhc
Confidence 344455556666776443221 111 11223344433 344778899999999886544443 34666777899999
Q ss_pred CCCCCcccHHHHHHHHHhcCC
Q 023146 265 SDGDGKLNLEDFQKIVSRCNM 285 (286)
Q Consensus 265 ~D~DG~IdyeEFv~ll~~~~~ 285 (286)
..++|.|+|++|..++...++
T Consensus 119 r~~~~~vs~~~~~~if~~t~l 139 (694)
T KOG0751|consen 119 RLGNGEVSFEDVADIFGQTNL 139 (694)
T ss_pred ccCCCceehHHHHHHHhcccc
Confidence 999999999999999987654
No 113
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=68.46 E-value=15 Score=39.66 Aligned_cols=64 Identities=22% Similarity=0.296 Sum_probs=52.2
Q ss_pred CHHHHHHHhhhhc--CCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 216 TEDEVILHFFQFN--DAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 216 ~eeeL~~aF~~fD--~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
+.++-...|..|+ +-+.||||-..-+..|...| |+..-+-.|..-.|.|.||+++..||.-.|.
T Consensus 11 T~~Er~K~~~qF~~Lkp~~gfitg~qArnfflqS~--LP~~VLaqIWALsDldkDGrmdi~EfSIAmk 76 (1118)
T KOG1029|consen 11 TDEERQKHDAQFGQLKPGQGFITGDQARNFFLQSG--LPTPVLAQIWALSDLDKDGRMDIREFSIAMK 76 (1118)
T ss_pred chHHHHHHHHHHhccCCCCCccchHhhhhhHHhcC--CChHHHHHHHHhhhcCccccchHHHHHHHHH
Confidence 3455556666665 46889999999999998877 6667788899999999999999999987765
No 114
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=67.00 E-value=23 Score=29.35 Aligned_cols=53 Identities=13% Similarity=0.198 Sum_probs=45.0
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHH
Q 023146 220 VILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQ 277 (286)
Q Consensus 220 L~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv 277 (286)
+..+|-++...|+-..+..+|+.+|...|.....+.++.+|..+. |+ +.+|.+
T Consensus 3 yvaAYLL~~lgGn~~psa~DikkIl~sVG~E~d~e~i~~visel~----GK-~i~ElI 55 (112)
T KOG3449|consen 3 YVAAYLLAVLGGNASPSASDIKKILESVGAEIDDERINLVLSELK----GK-DIEELI 55 (112)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHhCcccCHHHHHHHHHHhc----CC-CHHHHH
Confidence 456788888899999999999999999999999999999999985 44 555554
No 115
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=64.48 E-value=4.9 Score=39.85 Aligned_cols=63 Identities=21% Similarity=0.303 Sum_probs=48.1
Q ss_pred CHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHH-HHHHHHHhcCCCCCcccHHHHHH
Q 023146 216 TEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDE-LFDMIHCFDSDGDGKLNLEDFQK 278 (286)
Q Consensus 216 ~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeE-v~~mI~~~D~D~DG~IdyeEFv~ 278 (286)
..++++++|+.+|+.+.|+|+..-|+.+|..++...++.. |.-|=+.+|+.+-|-|-..+|+.
T Consensus 307 ~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg 370 (449)
T KOG2871|consen 307 PSEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLG 370 (449)
T ss_pred CCHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEeccccc
Confidence 3479999999999999999999999999999985565544 44444446777767666666554
No 116
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=64.13 E-value=2.8 Score=45.49 Aligned_cols=63 Identities=19% Similarity=0.269 Sum_probs=55.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
..+..+|..+|.+.+|+|+..+++.+|...| ++...+..+....|..+.|.|++.+|+-.|..
T Consensus 283 ~~~~~if~q~d~~~dG~I~s~~~~~~f~~~g--l~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~ 345 (847)
T KOG0998|consen 283 QKYSKIFSQVDKDNDGSISSNEARNIFLPFG--LSKPRLAHVWLLADTQNTGTLSKDEFALAMHL 345 (847)
T ss_pred HHHHHHHHhccccCCCcccccccccccccCC--CChhhhhhhhhhcchhccCcccccccchhhhh
Confidence 4667789999999999999999999998855 78889999999999999999999998876643
No 117
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=61.36 E-value=26 Score=36.71 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=21.0
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHH
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRR 242 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~ 242 (286)
.-|.++|++.|.|++|+++-.||-.
T Consensus 195 ~al~RIFki~D~d~D~~Lsd~Eln~ 219 (625)
T KOG1707|consen 195 KALKRIFKISDSDNDGALSDAELND 219 (625)
T ss_pred HHHHHHHhhhccccccccchhhhhH
Confidence 4578889999999999999888654
No 118
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=55.18 E-value=1.1e+02 Score=25.61 Aligned_cols=90 Identities=16% Similarity=0.072 Sum_probs=53.7
Q ss_pred cccchHHhHHHhhhhhh--hhhcccCCHHHHHHHhhhhcCCC--CCcccHHHHHHHHHHc--------CCCCC-------
Q 023146 192 GIACGRENTGMGKRKKS--FTARVKMTEDEVILHFFQFNDAE--KGSISLRDLRRVSVAH--------DFIWT------- 252 (286)
Q Consensus 192 G~Idf~EFl~~~k~k~~--~~~~~~~~eeeL~~aF~~fD~dg--dG~Is~~EL~~~L~~l--------G~~Lt------- 252 (286)
+.|-|..|-+.+|-+.- ...-...+...+..+|+.+.... +..|+..++..+|..+ +....
T Consensus 13 n~IrfsaYRtA~KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~ 92 (127)
T PF09068_consen 13 NNIRFSAYRTAMKLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVD 92 (127)
T ss_dssp TT-SSHHHHHHHHHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----
T ss_pred hhHHHHHhHHHHHHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHH
Confidence 46778888877764321 11112344567888888876543 4679999999988864 21111
Q ss_pred ---HHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 253 ---DDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 253 ---deEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
+--+..++..||+++.|.|..-.|...+.
T Consensus 93 ~a~~L~ln~Ll~vyD~~rtG~I~vls~KvaL~ 124 (127)
T PF09068_consen 93 LAVDLLLNWLLNVYDSQRTGKIRVLSFKVALI 124 (127)
T ss_dssp HHHHHHHHHHHHHH-TT--SEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeeehhHHHHHHH
Confidence 11245677889999999999998877654
No 119
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=54.51 E-value=51 Score=35.47 Aligned_cols=89 Identities=12% Similarity=0.183 Sum_probs=61.3
Q ss_pred CCccCCCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHh
Q 023146 184 APTQNGKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCF 263 (286)
Q Consensus 184 ~~~d~d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~ 263 (286)
...|.+.+|.++|.+-....+.- . .......+...|+..+..++|.|...++......+.... ++..+|..+
T Consensus 143 ~~ad~~~~~~~~~~~~~~~~~~~-n----~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp---ev~~~f~~~ 214 (746)
T KOG0169|consen 143 QEADKNKNGHMSFDEVLDLLKQL-N----VQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRP---EVYFLFVQY 214 (746)
T ss_pred HHHccccccccchhhHHHHHHHH-H----HhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCc---hHHHHHHHH
Confidence 45678889999999876555431 1 134456778888888888999999999888877766444 566666665
Q ss_pred cCCCCCcccHHHHHHHHH
Q 023146 264 DSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 264 D~D~DG~IdyeEFv~ll~ 281 (286)
-.+ .+.++.++++.++.
T Consensus 215 s~~-~~~ls~~~L~~Fl~ 231 (746)
T KOG0169|consen 215 SHG-KEYLSTDDLLRFLE 231 (746)
T ss_pred hCC-CCccCHHHHHHHHH
Confidence 443 55666666555553
No 120
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=54.28 E-value=36 Score=28.02 Aligned_cols=56 Identities=18% Similarity=0.244 Sum_probs=39.2
Q ss_pred hhhcCCCCCcccHHHHHHHHHH----------cCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 023146 225 FQFNDAEKGSISLRDLRRVSVA----------HDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIV 280 (286)
Q Consensus 225 ~~fD~dgdG~Is~~EL~~~L~~----------lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll 280 (286)
++||...+-|||.++++.++.. .|..+|..-+-.||-+....+...++..=...++
T Consensus 10 RLYDT~tS~YITLedi~~lV~~g~~f~V~DakTgeDiT~~iL~QII~E~E~~g~~~lp~~~L~qlI 75 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVREGREFQVVDSKSGDDLTRSILLQIIAEEESGGEPVLSTDFLTQII 75 (107)
T ss_pred cccCCCccceeeHHHHHHHHHCCCeEEEEECCCCchhHHHHHHHHHHHHHhCCCCCCCHHHHHHHH
Confidence 4678888888888888888874 2677777777777777766666556554333333
No 121
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=49.99 E-value=23 Score=27.49 Aligned_cols=51 Identities=10% Similarity=0.176 Sum_probs=32.6
Q ss_pred CCcccHHHHHHHHHHcC--CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 232 KGSISLRDLRRVSVAHD--FIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 232 dG~Is~~EL~~~L~~lG--~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
+|.|+..|...+-..+. +.++..+...++..+.......+++.+|...+..
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 65 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKE 65 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 67777777555543321 3467777777777776655566777777776653
No 122
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=48.68 E-value=53 Score=24.64 Aligned_cols=46 Identities=13% Similarity=0.116 Sum_probs=30.3
Q ss_pred ccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 023146 235 ISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIV 280 (286)
Q Consensus 235 Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll 280 (286)
|+..++..++...|..+|..++..|++.-+..+--..+-..+..++
T Consensus 14 l~d~~m~~if~l~~~~vs~~el~a~lrke~~~~y~~c~D~~L~~FL 59 (68)
T PF07308_consen 14 LKDDDMIEIFALAGFEVSKAELSAWLRKEDEKGYKECSDQLLRNFL 59 (68)
T ss_pred CChHHHHHHHHHcCCccCHHHHHHHHCCCCCccccccChHHHHHHH
Confidence 3445777888888888888888888888654443344444444443
No 123
>PLN02222 phosphoinositide phospholipase C 2
Probab=48.33 E-value=51 Score=34.56 Aligned_cols=65 Identities=18% Similarity=0.257 Sum_probs=51.5
Q ss_pred CHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcC-C-CCCHHHHHHHHHHhcC-CCCCcccHHHHHHHHHh
Q 023146 216 TEDEVILHFFQFNDAEKGSISLRDLRRVSVAHD-F-IWTDDELFDMIHCFDS-DGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 216 ~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG-~-~LtdeEv~~mI~~~D~-D~DG~IdyeEFv~ll~~ 282 (286)
...+|..+|..|-. +++++.++|...|.... . ..+.+.+..||..+.. -..+.++++.|..+|..
T Consensus 23 ~~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 23 APREIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred CcHHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 44699999999853 47999999999998863 3 4578889999998632 23567999999999975
No 124
>PTZ00373 60S Acidic ribosomal protein P2; Provisional
Probab=45.93 E-value=86 Score=25.93 Aligned_cols=54 Identities=9% Similarity=0.100 Sum_probs=43.6
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHH
Q 023146 220 VILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQK 278 (286)
Q Consensus 220 L~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ 278 (286)
+..+|-++-..|+..||..+|..+|...|..+....+..++..+. ..++++++.
T Consensus 5 yvaAYlL~~lgG~~~pTaddI~kIL~AaGveVd~~~~~l~~~~L~-----GKdI~ELIa 58 (112)
T PTZ00373 5 YVAAYLMCVLGGNENPTKKEVKNVLSAVNADVEDDVLDNFFKSLE-----GKTPHELIA 58 (112)
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHHc-----CCCHHHHHH
Confidence 455666777788888999999999999999999999998988884 256666654
No 125
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=45.54 E-value=34 Score=25.65 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=32.5
Q ss_pred hhhcCCCCCcccHHHHHHHHHHc----------CCCCCHHHHHHHHHHhcC
Q 023146 225 FQFNDAEKGSISLRDLRRVSVAH----------DFIWTDDELFDMIHCFDS 265 (286)
Q Consensus 225 ~~fD~dgdG~Is~~EL~~~L~~l----------G~~LtdeEv~~mI~~~D~ 265 (286)
++||...+.|||.+++..++..- |..+|..-+-++|-+...
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~g~~~~V~D~ktgeDiT~~iL~QIi~e~e~ 60 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVREGEDFKVVDAKTGEDITRSILLQIILEEES 60 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHCCCeEEEEECCCCcccHHHHHHHHHHHHHh
Confidence 47899999999999999999852 677777777777766543
No 126
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=44.26 E-value=22 Score=37.23 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=42.1
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcC-CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHD-FIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG-~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
.-|..+|..||.|++|-++..+|..++..++ .+|+..-..... -....|+|+|.-|+....
T Consensus 315 ~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~t---~~~~~G~ltl~g~l~~Ws 376 (625)
T KOG1707|consen 315 RFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSSPYKDST---VKNERGWLTLNGFLSQWS 376 (625)
T ss_pred HHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCCcccccc---eecccceeehhhHHHHHH
Confidence 4578899999999999999999999999975 333311111100 111568899888876553
No 127
>cd00086 homeodomain Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Probab=43.63 E-value=70 Score=21.68 Aligned_cols=38 Identities=11% Similarity=0.038 Sum_probs=31.1
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHH
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHC 262 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~ 262 (286)
..|..+|.. +.+.+..++..+...+| |+...|..+|..
T Consensus 13 ~~Le~~f~~-----~~~P~~~~~~~la~~~~--l~~~qV~~WF~n 50 (59)
T cd00086 13 EELEKEFEK-----NPYPSREEREELAKELG--LTERQVKIWFQN 50 (59)
T ss_pred HHHHHHHHh-----CCCCCHHHHHHHHHHHC--cCHHHHHHHHHH
Confidence 355666665 56999999999999988 889999999875
No 128
>smart00726 UIM Ubiquitin-interacting motif. Present in proteasome subunit S5a and other ubiquitin-associated proteins.
Probab=43.62 E-value=13 Score=22.83 Aligned_cols=17 Identities=47% Similarity=0.716 Sum_probs=14.3
Q ss_pred CHHHHHHHHHhhcCCCc
Q 023146 164 DDDELMQAIALSLQPSE 180 (286)
Q Consensus 164 dd~eL~qAialsL~~s~ 180 (286)
+++.|++||++|++...
T Consensus 2 EDe~Lq~Ai~lSl~e~e 18 (26)
T smart00726 2 EDEDLQLALELSLQEAE 18 (26)
T ss_pred hHHHHHHHHHHhHHHhh
Confidence 68899999999987654
No 129
>PF00046 Homeobox: Homeobox domain not present here.; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....
Probab=42.66 E-value=69 Score=21.94 Aligned_cols=44 Identities=9% Similarity=0.094 Sum_probs=32.2
Q ss_pred CCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHH
Q 023146 215 MTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHC 262 (286)
Q Consensus 215 ~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~ 262 (286)
.+...+..+-..|.. +.+++..+...+...+| |+...|..+|..
T Consensus 7 ~t~~q~~~L~~~f~~--~~~p~~~~~~~la~~l~--l~~~~V~~WF~n 50 (57)
T PF00046_consen 7 FTKEQLKVLEEYFQE--NPYPSKEEREELAKELG--LTERQVKNWFQN 50 (57)
T ss_dssp SSHHHHHHHHHHHHH--SSSCHHHHHHHHHHHHT--SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH--hcccccccccccccccc--ccccccccCHHH
Confidence 344444444444543 77999999999998887 888999998864
No 130
>PLN02228 Phosphoinositide phospholipase C
Probab=42.62 E-value=89 Score=32.70 Aligned_cols=67 Identities=16% Similarity=0.210 Sum_probs=52.0
Q ss_pred cCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcC-C-CCCHHHHHHHHHHhcCC----CCCcccHHHHHHHHHh
Q 023146 214 KMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHD-F-IWTDDELFDMIHCFDSD----GDGKLNLEDFQKIVSR 282 (286)
Q Consensus 214 ~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG-~-~LtdeEv~~mI~~~D~D----~DG~IdyeEFv~ll~~ 282 (286)
..+-.+|..+|..|-. +++|+.++|...|.... . ..+.+.+..+|..+... ..|.++++.|..+|..
T Consensus 20 ~~~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 20 REPPVSIKRLFEAYSR--NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred CCCcHHHHHHHHHhcC--CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 3456799999998853 36899999999998863 2 35667789999988643 2467999999999865
No 131
>PLN02230 phosphoinositide phospholipase C 4
Probab=42.28 E-value=85 Score=33.05 Aligned_cols=69 Identities=14% Similarity=0.107 Sum_probs=51.7
Q ss_pred cCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHcC-C--CCCHHHHHHHHHHhcC-------CCCCcccHHHHHHHHHhc
Q 023146 214 KMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAHD-F--IWTDDELFDMIHCFDS-------DGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 214 ~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG-~--~LtdeEv~~mI~~~D~-------D~DG~IdyeEFv~ll~~~ 283 (286)
..+..+|..+|..|-.++ ++++.++|...|.... . ..+.+++..+|..+-. -..+.|+++.|..+|...
T Consensus 25 ~~p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s~ 103 (598)
T PLN02230 25 SGPVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFST 103 (598)
T ss_pred CCCcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcCc
Confidence 345679999999995444 8999999999999864 2 3577788888875421 134569999999988763
No 132
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=39.48 E-value=39 Score=35.65 Aligned_cols=81 Identities=15% Similarity=0.208 Sum_probs=61.2
Q ss_pred CcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc--------CCCCCHHHHHHHHHH
Q 023146 191 KGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH--------DFIWTDDELFDMIHC 262 (286)
Q Consensus 191 ~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l--------G~~LtdeEv~~mI~~ 262 (286)
++ |+++||. .. ....+..++..|..+|. ++|.++.+++..++..+ ....+.+....++..
T Consensus 2 ~~-~~~~~~~-~~---------~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (646)
T KOG0039|consen 2 EG-ISFQELK-IT---------DCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEE 69 (646)
T ss_pred CC-cchhhhc-cc---------CCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhh
Confidence 46 8899996 11 14456789999999998 99999999999888753 234445566778888
Q ss_pred hcCCCCCcccHHHHHHHHHhc
Q 023146 263 FDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 263 ~D~D~DG~IdyeEFv~ll~~~ 283 (286)
.|.+..|.+.+.++..++...
T Consensus 70 ~~~~~~~y~~~~~~~~ll~~~ 90 (646)
T KOG0039|consen 70 LDPDHKGYITNEDLEILLLQI 90 (646)
T ss_pred ccccccceeeecchhHHHHhc
Confidence 899988888888877776543
No 133
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=37.60 E-value=32 Score=28.71 Aligned_cols=30 Identities=7% Similarity=0.093 Sum_probs=23.4
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
--+.+++.+||.+++|.|.+-.++.+|..+
T Consensus 97 L~ln~Ll~vyD~~rtG~I~vls~KvaL~~L 126 (127)
T PF09068_consen 97 LLLNWLLNVYDSQRTGKIRVLSFKVALITL 126 (127)
T ss_dssp HHHHHHHHHH-TT--SEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCeeehhHHHHHHHHh
Confidence 357788999999999999999999998765
No 134
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=37.12 E-value=2.4e+02 Score=31.47 Aligned_cols=65 Identities=11% Similarity=0.184 Sum_probs=55.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHc------C----CCCCHHHHHHHHHHhcCCC----CCcccHHHHHHHHHh
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAH------D----FIWTDDELFDMIHCFDSDG----DGKLNLEDFQKIVSR 282 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~l------G----~~LtdeEv~~mI~~~D~D~----DG~IdyeEFv~ll~~ 282 (286)
.+|..+|..+-.+..-|+|...|...|..- + ..+....++.||..+.++. .|+|+-+=|+.++..
T Consensus 221 ~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 221 PEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred hhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 589999999988888899999999999852 2 4567789999999998775 489999999998876
No 135
>PF07499 RuvA_C: RuvA, C-terminal domain; InterPro: IPR011114 In prokaryotes, RuvA, RuvB, and RuvC process the universal DNA intermediate of homologous recombination, termed Holliday junction. The tetrameric DNA helicase RuvA specifically binds to the Holliday junction and facilitates the isomerization of the junction from the stacked folded configuration to the square-planar structure []. In the RuvA tetramer, each subunit consists of three domains, I, II and III, where I and II form the major core that is responsible for Holliday junction binding and base pair rearrangements of Holliday junction executed at the crossover point, whereas domain III regulates branch migration through direct contact with RuvB. The domain represents the C-terminal domain III of RuvA. This domain plays a significant role in the ATP-dependent branch migration of the hetero-duplex through direct contact with RuvB []. Within the Holliday junction, this domain makes no interaction with the DNA.; GO: 0005524 ATP binding, 0009378 four-way junction helicase activity, 0006281 DNA repair, 0006310 DNA recombination, 0009379 Holliday junction helicase complex; PDB: 1HJP_A 1CUK_A 1C7Y_A 1IXS_A 1IXR_B 1BVS_E 2ZTC_A 2ZTD_B 2H5X_A.
Probab=36.60 E-value=1.1e+02 Score=20.90 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 237 LRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 237 ~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
..|+..+|..|| ++..++..++..+.. ...++.++.++...
T Consensus 3 ~~d~~~AL~~LG--y~~~e~~~av~~~~~--~~~~~~e~~ik~aL 43 (47)
T PF07499_consen 3 LEDALEALISLG--YSKAEAQKAVSKLLE--KPGMDVEELIKQAL 43 (47)
T ss_dssp HHHHHHHHHHTT--S-HHHHHHHHHHHHH--STTS-HHHHHHHHH
T ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHhhc--CCCCCHHHHHHHHH
Confidence 357788888888 688999999999865 34467777666543
No 136
>cd05833 Ribosomal_P2 Ribosomal protein P2. This subfamily represents the eukaryotic large ribosomal protein P2. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P2 is located in the L12 stalk, with proteins P1, P0, L11, and 28S rRNA. P1 and P2 are the only proteins in the ribosome to occur as multimers, always appearing as sets of heterodimers. Recent data indicate that eukaryotes have four copies (two heterodimers), while most archaeal species contain six copies of L12p (three homodimers). Bacteria may have four or six copies of L7/L12 (two or three homodimers) depending on the species. Experiments using S. cerevisiae P1 and P2 indicate that P1 proteins are positioned more internally with limited reactivity in the C-terminal domains, while P2 proteins seem to be more externally located and are more likely to interact with other cellular components. In lower eukaryotes, P1 and P2 are further subdivided into P1A, P1B, P2
Probab=35.56 E-value=1.6e+02 Score=24.17 Aligned_cols=55 Identities=15% Similarity=0.198 Sum_probs=43.6
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHH
Q 023146 220 VILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKI 279 (286)
Q Consensus 220 L~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~l 279 (286)
+..+|-++-..|+..||.+++..+|...|..+....+..+++.+. | .++.+.+.-
T Consensus 3 yvaAylL~~l~g~~~pTa~dI~~IL~AaGveVe~~~~~lf~~~L~----G-Kdi~eLIa~ 57 (109)
T cd05833 3 YVAAYLLAVLGGNASPSAADVKKILGSVGVEVDDEKLNKVISELE----G-KDVEELIAA 57 (109)
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHHc----C-CCHHHHHHH
Confidence 345666667788889999999999999999998888888888874 2 566766654
No 137
>PF02809 UIM: Ubiquitin interaction motif; InterPro: IPR003903 The Ubiquitin Interacting Motif (UIM), or 'LALAL-motif', is a stretch of about 20 amino acid residues, which was first described in the 26S proteasome subunit PSD4/RPN-10 that is known to recognise ubiquitin [,]. In addition, the UIM is found, often in tandem or triplet arrays, in a variety of proteins either involved in ubiquitination and ubiquitin metabolism, or known to interact with ubiquitin-like modifiers. Among the UIM proteins are two different subgroups of the UBP (ubiquitin carboxy-terminal hydrolase) family of deubiquitinating enzymes, one F-box protein, one family of HECT-containing ubiquitin-ligases (E3s) from plants, and several proteins containing ubiquitin-associated UBA and/or UBX domains []. In most of these proteins, the UIM occurs in multiple copies and in association with other domains such as UBA (IPR015940 from INTERPRO), UBX (IPR001012 from INTERPRO), ENTH, EH (IPR000261 from INTERPRO), VHS (IPR002014 from INTERPRO), SH3 (IPR001452 from INTERPRO), HECT (IPR000569 from INTERPRO), VWFA (IPR002035 from INTERPRO), EF-hand calcium-binding, WD-40 (IPR001680 from INTERPRO), F-box (IPR001810 from INTERPRO), LIM (IPR001781 from INTERPRO), protein kinase (IPR000719 from INTERPRO), ankyrin (IPR002110 from INTERPRO), PX (IPR001683 from INTERPRO), phosphatidylinositol 3- and 4-kinase (IPR000403 from INTERPRO), C2 (IPR000008 from INTERPRO), OTU (IPR003323 from INTERPRO), dnaJ (IPR001623 from INTERPRO), RING-finger (IPR001841 from INTERPRO) or FYVE-finger (IPR017455 from INTERPRO). UIMs have been shown to bind ubiquitin and to serve as a specific targeting signal important for monoubiquitination. Thus, UIMs may have several functions in ubiquitin metabolism each of which may require different numbers of UIMs [, , ]. The UIM is unlikely to form an independent folding domain. Instead, based on the spacing of the conserved residues, the motif probably forms a short alpha-helix that can be embedded into different protein folds []. Some proteins known to contain an UIM are listed below: Eukaryotic PSD4/RPN-10/S5, a multi-ubiquitin binding subunit of the 26S proteasome. Vertebrate Machado-Joseph disease protein 1 (Ataxin-3), which acts as a histone-binding protein that regulates transcription; defects in Ataxin-3 cause the neurodegenerative disorder Machado-Joseph disease (MJD). Vertebrate epsin and epsin2. Vertebrate hepatocyte growth factor-regulated tyrosine kinase substrate (HRS). Mammalian epidermal growth factor receptor substrate 15 (EPS15), which is involved in cell growth regulation. Mammalian epidermal growth factor receptor substrate EPS15R. Drosophila melanogaster (Fruit fly) liquid facets (lqf), an epsin. Yeast VPS27 vacuolar sorting protein, which is required for membrane traffic to the vacuole. ; PDB: 2KDE_A 2KDF_A 1YX6_A 1YX5_A 1YX4_A 1P9C_A 1UEL_B 1P9D_S 2KLZ_A.
Probab=34.94 E-value=12 Score=21.06 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=12.3
Q ss_pred CCHHHHHHHHHhhcC
Q 023146 163 ADDDELMQAIALSLQ 177 (286)
Q Consensus 163 ~dd~eL~qAialsL~ 177 (286)
.++..|++||++|++
T Consensus 2 ~Ed~~L~~Al~~S~~ 16 (18)
T PF02809_consen 2 DEDEDLQRALEMSLE 16 (18)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhhhc
Confidence 357899999999865
No 138
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=34.77 E-value=22 Score=38.37 Aligned_cols=19 Identities=32% Similarity=0.720 Sum_probs=13.5
Q ss_pred ccccccCCCCCCCCCCCCC
Q 023146 84 KVLEDDEDYRPNDEDEGED 102 (286)
Q Consensus 84 ~~~~~d~~~~~~~~~~~~~ 102 (286)
-++++|..|.|+|++.++.
T Consensus 884 ese~e~~~y~psd~~v~~e 902 (960)
T KOG1189|consen 884 ESEEEDSAYEPSDDDVSDE 902 (960)
T ss_pred ccccccccCCccccCcccc
Confidence 3445577899998876654
No 139
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=33.61 E-value=66 Score=23.95 Aligned_cols=28 Identities=14% Similarity=0.377 Sum_probs=21.8
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 255 ELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 255 Ev~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
+|..||..+.. +.+.|+.++|..+|...
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~e 28 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREE 28 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHT
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHH
Confidence 57788888855 67889999988888653
No 140
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.27 E-value=75 Score=33.00 Aligned_cols=51 Identities=8% Similarity=0.063 Sum_probs=37.5
Q ss_pred cCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc-----CCCCCH----HHHHHHHHHhc
Q 023146 214 KMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH-----DFIWTD----DELFDMIHCFD 264 (286)
Q Consensus 214 ~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l-----G~~Ltd----eEv~~mI~~~D 264 (286)
.....+|..++.+.|.+.+|-+++.||..+|..+ |+.|++ --.-++|...+
T Consensus 261 klpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVaRkNgypLPe~LP~~L~P~~lqaa~ 320 (737)
T KOG1955|consen 261 KLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVARKNGYPLPESLPHCLHPNVLQAAA 320 (737)
T ss_pred cCchHHHHHHHhhcccCccccccHHHHHhhHhheeecccCCCCCCCCccccChhHhhhhc
Confidence 4556899999999999999999999999988653 555443 33344555544
No 141
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=30.47 E-value=1.7e+02 Score=26.03 Aligned_cols=64 Identities=19% Similarity=0.218 Sum_probs=42.9
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHcCC-----CCCHHHHHHHHHH-hcCCCCCcccHHHHHHHH
Q 023146 217 EDEVILHFFQFNDAEKGSISLRDLRRVSVAHDF-----IWTDDELFDMIHC-FDSDGDGKLNLEDFQKIV 280 (286)
Q Consensus 217 eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~-----~LtdeEv~~mI~~-~D~D~DG~IdyeEFv~ll 280 (286)
...+.++|..++..+.+.+|..|+..|+..--. .+....+.-.+-. +-.+.+|.+.-++-..++
T Consensus 95 p~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~~d~dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 95 PQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILAKDKDGFLSKEDIRGVY 164 (174)
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHHcCcCCcEeHHHHhhhc
Confidence 468999999999999999999999999987311 1222222221111 235678888877665543
No 142
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=28.44 E-value=1e+02 Score=23.05 Aligned_cols=31 Identities=10% Similarity=0.147 Sum_probs=28.1
Q ss_pred CcccHHHHHHHHHHcCCCCCHHHHHHHHHHh
Q 023146 233 GSISLRDLRRVSVAHDFIWTDDELFDMIHCF 263 (286)
Q Consensus 233 G~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~ 263 (286)
=-|+.+-++.++..+|.++++..|+.+++.+
T Consensus 30 Ppine~mir~M~~QMG~kpSekqi~Q~m~~m 60 (64)
T PF03672_consen 30 PPINEKMIRAMMMQMGRKPSEKQIKQMMRSM 60 (64)
T ss_pred CCCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 3789999999999999999999999998875
No 143
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=28.04 E-value=1e+02 Score=32.19 Aligned_cols=57 Identities=12% Similarity=0.064 Sum_probs=44.9
Q ss_pred CCCcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 189 GKKGIACGRENTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 189 d~~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
+++|.|++.+...++....... .....++++.+...++.+.+|.|++++|..++-.+
T Consensus 30 ~~~G~v~~~~l~~~f~k~~~~~--g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 30 DQKGYVTVYELPDAFKKAKLPL--GYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred CCCCeeehHHhHHHHHHhcccc--cchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 7899999999888776533221 34457899999999999999999999999876543
No 144
>smart00389 HOX Homeodomain. DNA-binding factors that are involved in the transcriptional regulation of key developmental processes
Probab=27.77 E-value=1.9e+02 Score=19.33 Aligned_cols=27 Identities=4% Similarity=-0.023 Sum_probs=23.6
Q ss_pred cccHHHHHHHHHHcCCCCCHHHHHHHHHH
Q 023146 234 SISLRDLRRVSVAHDFIWTDDELFDMIHC 262 (286)
Q Consensus 234 ~Is~~EL~~~L~~lG~~LtdeEv~~mI~~ 262 (286)
+.+..++..+...+| ++...|..+|..
T Consensus 24 ~P~~~~~~~la~~~~--l~~~qV~~WF~n 50 (56)
T smart00389 24 YPSREEREELAAKLG--LSERQVKVWFQN 50 (56)
T ss_pred CCCHHHHHHHHHHHC--cCHHHHHHhHHH
Confidence 899999999999987 778889888875
No 145
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=26.83 E-value=67 Score=31.67 Aligned_cols=57 Identities=14% Similarity=0.002 Sum_probs=40.2
Q ss_pred CCccCCCCcccchHH---hHHHhhhhhhhhhcccCCHHHHHHHhhhhcCCCCCcccHHHHHHHHHHc
Q 023146 184 APTQNGKKGIACGRE---NTGMGKRKKSFTARVKMTEDEVILHFFQFNDAEKGSISLRDLRRVSVAH 247 (286)
Q Consensus 184 ~~~d~d~~G~Idf~E---Fl~~~k~k~~~~~~~~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L~~l 247 (286)
...+.+.++.|+-.| |..+...+ .......+.+|+..|.+++-.|++.|++.+|..-
T Consensus 340 ~qLdkN~nn~i~rrEwKpFK~~l~k~-------s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~ 399 (421)
T KOG4578|consen 340 NQLDKNSNNDIERREWKPFKRVLLKK-------SKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVE 399 (421)
T ss_pred eeecccccCccchhhcchHHHHHHhh-------ccHHHHhhhcchhcccCCCceecHHHHhhhhccc
Confidence 456777777776665 43333222 2234567888999999999999999999988653
No 146
>PF08461 HTH_12: Ribonuclease R winged-helix domain; InterPro: IPR013668 This domain is found at the amino terminus of Ribonuclease R and a number of presumed transcriptional regulatory proteins from archaea.
Probab=26.44 E-value=99 Score=22.73 Aligned_cols=37 Identities=8% Similarity=0.162 Sum_probs=33.0
Q ss_pred CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCC
Q 023146 231 EKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDG 267 (286)
Q Consensus 231 gdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~ 267 (286)
.++-|+...|...|...|+.++.+.|...++.++.+|
T Consensus 10 ~~~P~g~~~l~~~L~~~g~~~se~avRrrLr~me~~G 46 (66)
T PF08461_consen 10 SDKPLGRKQLAEELKLRGEELSEEAVRRRLRAMERDG 46 (66)
T ss_pred cCCCCCHHHHHHHHHhcChhhhHHHHHHHHHHHHHCC
Confidence 4568999999999999999999999999999998775
No 147
>PF11239 DUF3040: Protein of unknown function (DUF3040); InterPro: IPR021401 Some members in this family of proteins with unknown function are annotated as membrane proteins however this cannot be confirmed.
Probab=26.28 E-value=62 Score=24.68 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=23.5
Q ss_pred hccHHHHHHHHHHHHHHHHHHHcCchHHHhhhhC
Q 023146 38 EISAYEKQRLSRIAENKARMEAMGLSKLASSLMG 71 (286)
Q Consensus 38 ~~~~ye~~r~~ri~en~~r~~~l~l~~l~~~l~~ 71 (286)
+++++|+.|+..||++... .=|++++++..
T Consensus 2 ~LSe~E~r~L~eiEr~L~~----~DP~fa~~l~~ 31 (82)
T PF11239_consen 2 PLSEHEQRRLEEIERQLRA----DDPRFAARLRS 31 (82)
T ss_pred CCCHHHHHHHHHHHHHHHh----cCcHHHHHhcc
Confidence 4789999999999987654 33778888855
No 148
>PLN02223 phosphoinositide phospholipase C
Probab=25.98 E-value=1.9e+02 Score=30.09 Aligned_cols=69 Identities=10% Similarity=-0.104 Sum_probs=52.0
Q ss_pred cCCHHHHHHHhhhhcCCCCCcccHHHHHHHH---HHc-C-CCCCHHHHHHHHHHhcCCC--------CCcccHHHHHHHH
Q 023146 214 KMTEDEVILHFFQFNDAEKGSISLRDLRRVS---VAH-D-FIWTDDELFDMIHCFDSDG--------DGKLNLEDFQKIV 280 (286)
Q Consensus 214 ~~~eeeL~~aF~~fD~dgdG~Is~~EL~~~L---~~l-G-~~LtdeEv~~mI~~~D~D~--------DG~IdyeEFv~ll 280 (286)
...-.++..+|..|- .+.|..+...|.+.| ... | ...+.++...+|..+-... .+.++++.|..+|
T Consensus 12 ~~~p~~v~~~f~~~~-~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~~L 90 (537)
T PLN02223 12 ANQPDLILNFFGNEF-HGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNEFL 90 (537)
T ss_pred CCCcHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHHHh
Confidence 345578999999984 778899999999998 333 3 4677888888888653322 2669999999999
Q ss_pred Hhc
Q 023146 281 SRC 283 (286)
Q Consensus 281 ~~~ 283 (286)
...
T Consensus 91 ~s~ 93 (537)
T PLN02223 91 FST 93 (537)
T ss_pred cCc
Confidence 763
No 149
>cd04411 Ribosomal_P1_P2_L12p Ribosomal protein P1, P2, and L12p. Ribosomal proteins P1 and P2 are the eukaryotic proteins that are functionally equivalent to bacterial L7/L12. L12p is the archaeal homolog. Unlike other ribosomal proteins, the archaeal L12p and eukaryotic P1 and P2 do not share sequence similarity with their bacterial counterparts. They are part of the ribosomal stalk (called the L7/L12 stalk in bacteria), along with 28S rRNA and the proteins L11 and P0 in eukaryotes (23S rRNA, L11, and L10e in archaea). In bacterial ribosomes, L7/L12 homodimers bind the extended C-terminal helix of L10 to anchor the L7/L12 molecules to the ribosome. Eukaryotic P1/P2 heterodimers and archaeal L12p homodimers are believed to bind the L10 equivalent proteins, eukaryotic P0 and archaeal L10e, in a similar fashion. P1 and P2 (L12p, L7/L12) are the only proteins in the ribosome to occur as multimers, always appearing as sets of dimers. Recent data indicate that most archaeal species contain
Probab=25.87 E-value=3.2e+02 Score=22.18 Aligned_cols=41 Identities=5% Similarity=0.072 Sum_probs=34.5
Q ss_pred ccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 023146 235 ISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIV 280 (286)
Q Consensus 235 Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll 280 (286)
||.++|..+|...|..++..-+..+++.+. .+++++++.-.
T Consensus 17 ~ta~~I~~IL~aaGveVe~~~~~~~~~aLa-----Gk~V~eli~~g 57 (105)
T cd04411 17 LTEDKIKELLSAAGAEIEPERVKLFLSALN-----GKNIDEVISKG 57 (105)
T ss_pred CCHHHHHHHHHHcCCCcCHHHHHHHHHHHc-----CCCHHHHHHHH
Confidence 999999999999999999999999998873 25677776544
No 150
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=25.63 E-value=69 Score=18.78 Aligned_cols=16 Identities=44% Similarity=0.748 Sum_probs=9.4
Q ss_pred cCCCCCcccHHHHHHH
Q 023146 264 DSDGDGKLNLEDFQKI 279 (286)
Q Consensus 264 D~D~DG~IdyeEFv~l 279 (286)
|.++||.|+--+|..+
T Consensus 1 DvN~DG~vna~D~~~l 16 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALL 16 (21)
T ss_dssp -TTSSSSSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHH
Confidence 4566777766666543
No 151
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=25.49 E-value=75 Score=24.19 Aligned_cols=32 Identities=6% Similarity=0.229 Sum_probs=19.4
Q ss_pred CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Q 023146 231 EKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFD 264 (286)
Q Consensus 231 gdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D 264 (286)
..|+||..+|..+|-.. .++.+.|..++..+.
T Consensus 18 ~~G~lT~~eI~~~L~~~--~~~~e~id~i~~~L~ 49 (82)
T PF03979_consen 18 KKGYLTYDEINDALPED--DLDPEQIDEIYDTLE 49 (82)
T ss_dssp HHSS-BHHHHHHH-S-S-----HHHHHHHHHHHH
T ss_pred hcCcCCHHHHHHHcCcc--CCCHHHHHHHHHHHH
Confidence 36788888888877643 377777888777764
No 152
>PF01885 PTS_2-RNA: RNA 2'-phosphotransferase, Tpt1 / KptA family; InterPro: IPR002745 The final step of tRNA splicing in Saccharomyces cerevisiae (Baker's yeast) requires 2'-phosphotransferase (Tpt1) to transfer the 2'-phosphate from ligated tRNA to NAD, producing mature tRNA and ADP ribose-1' '-2' '-cyclic phosphate. Yeast and Mus musculus (Mouse) Tpt1 protein and bacterial KptA protein can catalyze the conversion of the generated intermediate to both product and the original substrate, these enzymes likely use the same reaction mechanism. Step 1 of this reaction is strikingly similar to the ADP-ribosylation of proteins catalyzed by a number of bacterial toxins. KptA, a functional Tpt1 protein homologue from Escherichia coli is strikingly similar to yeast Tpt1 in its kinetic parameters, although E. coli is not known to have a 2'-phosphorylated RNA substrate [,].; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0006388 tRNA splicing, via endonucleolytic cleavage and ligation; PDB: 1WFX_A.
Probab=25.29 E-value=1.1e+02 Score=27.26 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=25.4
Q ss_pred cCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Q 023146 228 NDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFD 264 (286)
Q Consensus 228 D~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D 264 (286)
..+.+|++..++|...+..-+..+|.++|..++..-+
T Consensus 26 ~~d~~G~v~v~dLL~~~~~~~~~~t~~~i~~vV~~~~ 62 (186)
T PF01885_consen 26 VMDPDGWVSVDDLLRALRFKGLWVTEEDIREVVETDD 62 (186)
T ss_dssp ---TT--EEHHHHHHHHHHT-TT--HHHHHHHHHH-S
T ss_pred ccCCCCCEeHHHHHHHHHHcCCCCCHHHHHHHHhhCC
Confidence 4578999999999999998888899999999998754
No 153
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=23.97 E-value=3.5e+02 Score=21.34 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=24.1
Q ss_pred cccHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Q 023146 234 SISLRDLRRVSVAHDFIWTDDELFDMIHCFD 264 (286)
Q Consensus 234 ~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D 264 (286)
.||..||......+|.++|......++..+-
T Consensus 14 ~iT~~eLlkyskqy~i~it~~QA~~I~~~lr 44 (85)
T PF11116_consen 14 NITAKELLKYSKQYNISITKKQAEQIANILR 44 (85)
T ss_pred cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Confidence 5788888888888888888888777777653
No 154
>PRK00523 hypothetical protein; Provisional
Probab=23.91 E-value=1.4e+02 Score=23.01 Aligned_cols=30 Identities=7% Similarity=0.098 Sum_probs=28.0
Q ss_pred cccHHHHHHHHHHcCCCCCHHHHHHHHHHh
Q 023146 234 SISLRDLRRVSVAHDFIWTDDELFDMIHCF 263 (286)
Q Consensus 234 ~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~ 263 (286)
-|+.+-++.++..+|.++++..|+.+++..
T Consensus 39 pine~mir~M~~QMGqKPSekki~Q~m~~m 68 (72)
T PRK00523 39 PITENMIRAMYMQMGRKPSESQIKQVMRSV 68 (72)
T ss_pred CCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 789999999999999999999999999876
No 155
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=23.60 E-value=1.3e+02 Score=31.21 Aligned_cols=61 Identities=16% Similarity=0.240 Sum_probs=47.2
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHH---hcC----C-CCCcccHHHHHHHHHhc
Q 023146 223 HFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHC---FDS----D-GDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 223 aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~---~D~----D-~DG~IdyeEFv~ll~~~ 283 (286)
+|.+|-...++.|...-|..+|+.+|..-++-.+..||.. ++. + ..+.++-+-|..++..+
T Consensus 91 LFyLiaegq~ekipihKFiTALkstGLrtsDPRLk~mMd~mKd~dq~~~e~S~gw~LdKDlFKkcI~sS 159 (622)
T KOG0506|consen 91 LFYLIAEGQSEKIPIHKFITALKSTGLRTSDPRLKDMMDEMKDVDQEENESSSGWLLDKDLFKKCIFSS 159 (622)
T ss_pred hhHHhhcCCcCcccHHHHHHHHHHcCCCcCCchHHHHHHHHHHHHhhhcccccceeecHHHHHHhhccc
Confidence 5777766668999999999999999998888777777665 343 2 23578889998887654
No 156
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.04 E-value=1.3e+02 Score=26.08 Aligned_cols=58 Identities=21% Similarity=0.342 Sum_probs=43.3
Q ss_pred HHhhhhcCCCCCcccHHHHHH---HHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 023146 222 LHFFQFNDAEKGSISLRDLRR---VSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSR 282 (286)
Q Consensus 222 ~aF~~fD~dgdG~Is~~EL~~---~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~ 282 (286)
-+|++...| |.++..|... +|.. .+.++..++..+|.....-+...|+|-.|...|.+
T Consensus 34 Llf~Vm~AD--G~v~~~E~~a~r~il~~-~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts~l~r 94 (148)
T COG4103 34 LLFHVMEAD--GTVSESEREAFRAILKE-NFGIDGEELDALIEAGEEAGYEAIDLYSFTSVLKR 94 (148)
T ss_pred HHHHHHhcc--cCcCHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 567877655 5566666443 3333 46799999999999988777788999999888875
No 157
>PRK06402 rpl12p 50S ribosomal protein L12P; Reviewed
Probab=22.93 E-value=3.5e+02 Score=22.14 Aligned_cols=43 Identities=21% Similarity=0.310 Sum_probs=35.1
Q ss_pred CCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHH
Q 023146 230 AEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQK 278 (286)
Q Consensus 230 dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ 278 (286)
.|. .||.+.|..+|...|..+....+..++..+. .++.++.+.
T Consensus 13 ~g~-~it~e~I~~IL~AAGveVee~~~k~~v~aL~-----GkdIeElI~ 55 (106)
T PRK06402 13 AGK-EINEDNLKKVLEAAGVEVDEARVKALVAALE-----DVNIEEAIK 55 (106)
T ss_pred cCC-CCCHHHHHHHHHHcCCCccHHHHHHHHHHHc-----CCCHHHHHH
Confidence 444 8999999999999999999999988888873 266776664
No 158
>TIGR02675 tape_meas_nterm tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Probab=22.78 E-value=86 Score=23.64 Aligned_cols=16 Identities=13% Similarity=0.235 Sum_probs=11.2
Q ss_pred CCCcccHHHHHHHHHH
Q 023146 231 EKGSISLRDLRRVSVA 246 (286)
Q Consensus 231 gdG~Is~~EL~~~L~~ 246 (286)
..|++..+||..++..
T Consensus 27 ~~Gkv~~ee~n~~~e~ 42 (75)
T TIGR02675 27 ASGKLRGEEINSLLEA 42 (75)
T ss_pred HcCcccHHHHHHHHHH
Confidence 4677777777777654
No 159
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.80 E-value=2.1e+02 Score=21.87 Aligned_cols=32 Identities=6% Similarity=0.021 Sum_probs=28.6
Q ss_pred CcccHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Q 023146 233 GSISLRDLRRVSVAHDFIWTDDELFDMIHCFD 264 (286)
Q Consensus 233 G~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D 264 (286)
=-|+.+-++.++..+|.++++..|+++++..-
T Consensus 37 Ppine~~iR~M~~qmGqKpSe~kI~Qvm~~i~ 68 (71)
T COG3763 37 PPINEEMIRMMMAQMGQKPSEKKINQVMRSII 68 (71)
T ss_pred CCCCHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 37999999999999999999999999988753
No 160
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=21.66 E-value=2.2e+02 Score=24.34 Aligned_cols=72 Identities=10% Similarity=0.079 Sum_probs=38.0
Q ss_pred CcccchHHhHHHhhhhhhhhhcccCCHHHHHHHhh----hhcCCCCCcccHHHHHHHHHH-cCCCCCHHHHHHHHHHhcC
Q 023146 191 KGIACGRENTGMGKRKKSFTARVKMTEDEVILHFF----QFNDAEKGSISLRDLRRVSVA-HDFIWTDDELFDMIHCFDS 265 (286)
Q Consensus 191 ~G~Idf~EFl~~~k~k~~~~~~~~~~eeeL~~aF~----~fD~dgdG~Is~~EL~~~L~~-lG~~LtdeEv~~mI~~~D~ 265 (286)
-+.++-.||..+.+.- .- + .....++..-|. +.-.+..+.|+.+-|+..|.+ |...++++-+.++|..|-.
T Consensus 5 ~~~lsp~eF~qLq~y~-ey-s--~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~ 80 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYS-EY-S--TKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQK 80 (138)
T ss_dssp -S-S-HHHHHHHHHHH-HH-------HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS--
T ss_pred eeccCHHHHHHHHHHH-HH-H--HHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhC
Confidence 3566777887665431 11 0 112344444453 111223558999999999998 5777999999999998854
Q ss_pred C
Q 023146 266 D 266 (286)
Q Consensus 266 D 266 (286)
.
T Consensus 81 ~ 81 (138)
T PF14513_consen 81 K 81 (138)
T ss_dssp -
T ss_pred c
Confidence 3
No 161
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=21.64 E-value=2.7e+02 Score=21.25 Aligned_cols=10 Identities=20% Similarity=0.527 Sum_probs=5.2
Q ss_pred CCcccHHHHH
Q 023146 232 KGSISLRDLR 241 (286)
Q Consensus 232 dG~Is~~EL~ 241 (286)
+|.|+..|..
T Consensus 13 DG~v~~~E~~ 22 (106)
T cd07316 13 DGRVSEAEIQ 22 (106)
T ss_pred cCCcCHHHHH
Confidence 4555555533
No 162
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=21.46 E-value=37 Score=27.50 Aligned_cols=51 Identities=14% Similarity=0.255 Sum_probs=27.5
Q ss_pred CCCcccHHHHHHHHHHc--CCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 231 EKGSISLRDLRRVSVAH--DFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 231 gdG~Is~~EL~~~L~~l--G~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
-||.|+..|+..+...+ ...++..+...++..++.-....+++.+|+..+.
T Consensus 36 aDG~v~~~E~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 88 (140)
T PF05099_consen 36 ADGEVDPEEIEAIRQLLAERFGLSPEEAEELIELADELKQEPIDLEELLRELR 88 (140)
T ss_dssp TTSS--CHHHHHHHHHHHHCGCGSCHHHHHHHHHHCHHHHHCCHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 36777777766655544 2344555666666655544344566666665543
No 163
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=21.29 E-value=84 Score=26.83 Aligned_cols=49 Identities=16% Similarity=0.343 Sum_probs=26.4
Q ss_pred CCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-------CCCcccHHHHHHHHHh
Q 023146 232 KGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSD-------GDGKLNLEDFQKIVSR 282 (286)
Q Consensus 232 dG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D-------~DG~IdyeEFv~ll~~ 282 (286)
-+.||+.||.++=.-+-. +...|.+++..|..+ ..+.|+|+-|..+|..
T Consensus 5 ~~~lsp~eF~qLq~y~ey--s~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~ 60 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYSEY--STKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKT 60 (138)
T ss_dssp -S-S-HHHHHHHHHHHHH------HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHH
T ss_pred eeccCHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHH
Confidence 356777777665433321 234567777777433 3468999999998864
No 164
>TIGR01639 P_fal_TIGR01639 Plasmodium falciparum uncharacterized domain TIGR01639. This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.
Probab=20.90 E-value=1.8e+02 Score=21.14 Aligned_cols=30 Identities=13% Similarity=0.150 Sum_probs=25.3
Q ss_pred cccHHHHHHHHHHcCCCCCHHHHHHHHHHh
Q 023146 234 SISLRDLRRVSVAHDFIWTDDELFDMIHCF 263 (286)
Q Consensus 234 ~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~ 263 (286)
.+|.++|..++..|+..++..++..|+..+
T Consensus 9 ~lTeEEl~~~i~~L~~~~~~~dm~~IW~~v 38 (61)
T TIGR01639 9 KLSKEELNELINSLDEIPNRNDMLIIWNQV 38 (61)
T ss_pred HccHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 578889999999999888888888877765
No 165
>PLN02952 phosphoinositide phospholipase C
Probab=20.20 E-value=2.6e+02 Score=29.55 Aligned_cols=52 Identities=13% Similarity=0.262 Sum_probs=38.6
Q ss_pred CCCcccHHHHHHHHHHcC--CCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHHhc
Q 023146 231 EKGSISLRDLRRVSVAHD--FIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVSRC 283 (286)
Q Consensus 231 gdG~Is~~EL~~~L~~lG--~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~~~ 283 (286)
+.|.++..++....+.+- ...+..+|..+|..+-.++ +.|+.++|..+|...
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~ 66 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLH 66 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHh
Confidence 468889988876666553 3346789999999986543 679999999888653
No 166
>COG2058 RPP1A Ribosomal protein L12E/L44/L45/RPP1/RPP2 [Translation, ribosomal structure and biogenesis]
Probab=20.19 E-value=3.8e+02 Score=22.15 Aligned_cols=52 Identities=17% Similarity=0.311 Sum_probs=40.3
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHH
Q 023146 221 ILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQK 278 (286)
Q Consensus 221 ~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ 278 (286)
..+|-+|..-+. -|+.+.|..+|...|..+.+..+.-++..+. | +|.++.+.
T Consensus 4 i~a~llL~~agk-ei~e~~l~~vl~aaGveve~~r~k~lvaaLe----g-~~idE~i~ 55 (109)
T COG2058 4 IYAYLLLHLAGK-EITEDNLKSVLEAAGVEVEEARAKALVAALE----G-VDIDEVIK 55 (109)
T ss_pred HHHHHHHHHccC-cCCHHHHHHHHHHcCCCccHHHHHHHHHHhc----C-CCHHHHHH
Confidence 344555555555 9999999999999999999999998888875 3 46776654
No 167
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=20.09 E-value=57 Score=35.63 Aligned_cols=62 Identities=19% Similarity=0.133 Sum_probs=52.1
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 023146 218 DEVILHFFQFNDAEKGSISLRDLRRVSVAHDFIWTDDELFDMIHCFDSDGDGKLNLEDFQKIVS 281 (286)
Q Consensus 218 eeL~~aF~~fD~dgdG~Is~~EL~~~L~~lG~~LtdeEv~~mI~~~D~D~DG~IdyeEFv~ll~ 281 (286)
..+..+|+.+|..++|+|+..+-...+...| |...-+-.++...|..+-|.++...|...++
T Consensus 11 ~~~~~~~~~~d~~~~G~i~g~~a~~f~~~s~--L~~qvl~qiws~~d~~~~g~l~~q~f~~~lr 72 (847)
T KOG0998|consen 11 PLFDQYFKSADPQGDGRITGAEAVAFLSKSG--LPDQVLGQIWSLADSSGKGFLNRQGFYAALR 72 (847)
T ss_pred chHHHhhhccCcccCCcccHHHhhhhhhccc--cchhhhhccccccccccCCccccccccccch
Confidence 4567789999999999999999888877665 7778888888889999889999998877654
Done!