Citrus Sinensis ID: 023159

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSVSQILYELTFYFTC
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHcccHHHHHHHHHHHHcccEEEEcccccEEEEccHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcHHcc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEccHHHHHHHHHcccccccccHHHHHHHHHHHcccEEccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEcHHHHHHHHHHHHHHHEEcccccHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccc
MDFLSIPFSFKALAIALAILVVQIVTKTLtqksgnkqkkyhpiggtvFNQLLNFNRLHHYMTDLAakhgtyrllgpfrsevyssdpanVEYMLKTnfdnygkgsynYSILKDLLgdgiftvdgekwreqrkisshEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVEldsvcgsneegtrfssafddASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSVSQILYELTFYFTC
MDFLSIPFSFKALAIALAILVVQIVTKTltqksgnkqkkyhpiGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREqrkisshefstKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVcgsneegtrfssafddaSAMTLWRYVDIFWKIKKLLnigsearlkqrieVIDTFVYKIIRKKTDQMHDFQEEYTSVSQILYELTFYFTC
MDFLSIPFSFKalaialailvvqivTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSVSQILYELTFYFTC
**FLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSVSQILYELTFYFT*
MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDS********TRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKII*********************YELTFYFTC
MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSVSQILYELTFYFTC
MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDF*****SVSQILYELTFYFTC
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iiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSVSQILYELTFYFTC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query286 2.2.26 [Sep-21-2011]
Q50EK3 518 Cytochrome P450 704C1 OS= N/A no 0.919 0.507 0.450 8e-66
P98188 513 Cytochrome P450 94A2 OS=V N/A no 0.800 0.446 0.371 3e-38
O81117 514 Cytochrome P450 94A1 OS=V N/A no 0.839 0.466 0.310 8e-33
Q9FMY1 559 Cytochrome P450 86B1 OS=A no no 0.835 0.427 0.332 2e-31
P48422 513 Cytochrome P450 86A1 OS=A no no 0.790 0.440 0.352 7e-31
O23066 553 Cytochrome P450 86A2 OS=A no no 0.793 0.410 0.320 1e-29
P30609 507 Cytochrome P450 52A7 OS=C N/A no 0.657 0.370 0.261 2e-11
Q9VL92 526 Cytochrome P450 4e3 OS=Dr yes no 0.622 0.338 0.270 6e-11
Q27589 501 Cytochrome P450 4d2 OS=Dr no no 0.664 0.379 0.226 2e-10
Q9VS79 463 Cytochrome P450 4d8 OS=Dr no no 0.545 0.336 0.25 3e-10
>sp|Q50EK3|C04C1_PINTA Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1 Back     alignment and function desciption
 Score =  250 bits (639), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 123/273 (45%), Positives = 190/273 (69%), Gaps = 10/273 (3%)

Query: 1   MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHY 60
           ++ L++  +  ALA+A ++ +   +      ++  K+  Y P+ GT+ N  +NF RLH Y
Sbjct: 3   VNILTMFVTVSALALACSLWIASYL------RNWRKKGVYPPVVGTMLNHAINFERLHDY 56

Query: 61  MTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFT 120
            TD A ++ T+R++ P  S V+++DP NVE++LKTNF NY KG++NY I+KDLLGDGIF 
Sbjct: 57  HTDQAQRYKTFRVVYPTCSYVFTTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFN 116

Query: 121 VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKS 180
           VDG+KWR+QRK++S EF++KVL+DFSS  F  NAAKLA +L++AA  +  +++QDLFM+S
Sbjct: 117 VDGDKWRQQRKLASSEFASKVLKDFSSGVFCNNAAKLANILAQAAKLNLSVEMQDLFMRS 176

Query: 181 TLDSIFKVAFGVELDSVCGSNEEG---TRFSSAFDDASAMTLWRY-VDIFWKIKKLLNIG 236
           +LDSI KV FG++++S+  S  E      F+ AFD A+AM   R+ V  FWK+++  N+G
Sbjct: 177 SLDSICKVVFGIDINSLSSSKAESGPEASFAKAFDVANAMVFHRHMVGSFWKVQRFFNVG 236

Query: 237 SEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEE 269
           SEA L+  I+++D F+YK+I  +  +M   ++E
Sbjct: 237 SEAILRDNIKMVDDFLYKVIHFRRQEMFSAEKE 269

Pinus taeda (taxid: 3352)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|P98188|C94A2_VICSA Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1 Back     alignment and function description
>sp|O81117|C94A1_VICSA Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2 Back     alignment and function description
>sp|Q9FMY1|C86B1_ARATH Cytochrome P450 86B1 OS=Arabidopsis thaliana GN=CYP86B1 PE=2 SV=1 Back     alignment and function description
>sp|P48422|C86A1_ARATH Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2 Back     alignment and function description
>sp|O23066|C86A2_ARATH Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1 Back     alignment and function description
>sp|P30609|CP52G_CANTR Cytochrome P450 52A7 OS=Candida tropicalis GN=CYP52A7 PE=2 SV=1 Back     alignment and function description
>sp|Q9VL92|CP4E3_DROME Cytochrome P450 4e3 OS=Drosophila melanogaster GN=Cyp4e3 PE=2 SV=1 Back     alignment and function description
>sp|Q27589|CP4D2_DROME Cytochrome P450 4d2 OS=Drosophila melanogaster GN=Cyp4d2 PE=2 SV=2 Back     alignment and function description
>sp|Q9VS79|CP4D8_DROME Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
296089094 515 unnamed protein product [Vitis vinifera] 0.930 0.516 0.713 1e-110
147765747 515 hypothetical protein VITISV_002118 [Viti 0.930 0.516 0.713 1e-110
225453789 505 PREDICTED: cytochrome P450 704C1 [Vitis 0.902 0.510 0.728 1e-109
224127430 509 cytochrome P450 [Populus trichocarpa] gi 0.930 0.522 0.690 1e-109
296089093 515 unnamed protein product [Vitis vinifera] 0.930 0.516 0.702 1e-109
71726950 499 cytochrome P450 monooxygenase [Petunia x 0.870 0.498 0.737 1e-109
255577339 394 cytochrome P450, putative [Ricinus commu 0.951 0.690 0.673 1e-108
359489500 515 PREDICTED: cytochrome P450 704C1-like [V 0.930 0.516 0.691 1e-107
359489502 505 PREDICTED: cytochrome P450 704C1-like [V 0.902 0.510 0.713 1e-107
356520547 491 PREDICTED: cytochrome P450 704C1-like is 0.916 0.533 0.670 1e-103
>gi|296089094|emb|CBI38797.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/269 (71%), Positives = 227/269 (84%), Gaps = 3/269 (1%)

Query: 1   MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHY 60
           M F   P S   L  A++ L +  + K L  KS  K+++YHPIGGTVFNQL NFNRLHHY
Sbjct: 4   MGFFCNPMS---LVFAISALTLVFLMKILVGKSTEKKRRYHPIGGTVFNQLFNFNRLHHY 60

Query: 61  MTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFT 120
           MTDLA KH TYRLL PFR+E+Y++DPANVEY+LKTNF+NYGKGSYNY+IL+DLLGDGIFT
Sbjct: 61  MTDLAGKHRTYRLLSPFRNEIYTADPANVEYILKTNFENYGKGSYNYNILRDLLGDGIFT 120

Query: 121 VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKS 180
           VD EKWR+QRK+SS+EFSTKVLRDFSS  FRKN AKLA ++SEAA+S++ +DIQDLFMK+
Sbjct: 121 VDDEKWRQQRKVSSYEFSTKVLRDFSSVVFRKNGAKLAIVVSEAASSNQTMDIQDLFMKA 180

Query: 181 TLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEAR 240
           TLDSIFKVAFGVELDS+CGSNEEGT+F SAFDDASAMTL+RYVDIFW IKK LNIGSEA 
Sbjct: 181 TLDSIFKVAFGVELDSMCGSNEEGTKFGSAFDDASAMTLYRYVDIFWTIKKSLNIGSEAT 240

Query: 241 LKQRIEVIDTFVYKIIRKKTDQMHDFQEE 269
           LK+ I+V+D FVYK+I  KT+ M + Q +
Sbjct: 241 LKRSIKVVDDFVYKLIHSKTELMKNSQND 269

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147765747|emb|CAN60189.1| hypothetical protein VITISV_002118 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225453789|ref|XP_002270673.1| PREDICTED: cytochrome P450 704C1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224127430|ref|XP_002320072.1| cytochrome P450 [Populus trichocarpa] gi|222860845|gb|EEE98387.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296089093|emb|CBI38796.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|71726950|gb|AAZ39646.1| cytochrome P450 monooxygenase [Petunia x hybrida] Back     alignment and taxonomy information
>gi|255577339|ref|XP_002529550.1| cytochrome P450, putative [Ricinus communis] gi|223530977|gb|EEF32833.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359489500|ref|XP_002270594.2| PREDICTED: cytochrome P450 704C1-like [Vitis vinifera] gi|296089092|emb|CBI38795.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359489502|ref|XP_002270628.2| PREDICTED: cytochrome P450 704C1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520547|ref|XP_003528923.1| PREDICTED: cytochrome P450 704C1-like isoform 2 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
TAIR|locus:2043634 511 CYP704A2 ""cytochrome P450, fa 0.860 0.481 0.497 8.1e-60
TAIR|locus:2054960 505 CYP704A1 ""cytochrome P450, fa 0.860 0.487 0.485 5.1e-58
TAIR|locus:2007181 524 CYP704B1 ""cytochrome P450, fa 0.811 0.442 0.440 1.1e-48
TAIR|locus:2102639 499 CYP94D2 ""cytochrome P450, fam 0.807 0.462 0.382 1.2e-35
TAIR|locus:2009278 498 CYP94D1 ""cytochrome P450, fam 0.846 0.485 0.354 9.5e-34
TAIR|locus:2181579 488 AT5G08250 [Arabidopsis thalian 0.716 0.420 0.362 2.6e-31
TAIR|locus:2114460 506 CYP94B3 "cytochrome P450, fami 0.762 0.430 0.353 4.1e-31
TAIR|locus:2166786 559 CYP86B1 ""cytochrome P450, fam 0.835 0.427 0.332 4.3e-31
TAIR|locus:2154558 513 CYP86A1 ""cytochrome P450, fam 0.786 0.438 0.358 4.1e-30
TAIR|locus:2167371 510 CYP94B1 ""cytochrome P450, fam 0.807 0.452 0.344 2.5e-29
TAIR|locus:2043634 CYP704A2 ""cytochrome P450, family 704, subfamily A, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 124/249 (49%), Positives = 168/249 (67%)

Query:    27 KTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDP 86
             +  T KS N  K+Y P+  TVF+ L + + L+ Y T++A +  TYR L P +SE+ ++DP
Sbjct:    28 RIFTGKSRN-DKRYAPVHATVFDLLFHSDELYDYETEIAREKPTYRFLSPGQSEILTADP 86

Query:    87 ANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFS 146
              NVE++LKT FDNY KG  +   + DLLG GIF VDGEKWR+QRK+SS EFST+VLRDFS
Sbjct:    87 RNVEHILKTRFDNYSKGHSSRENMADLLGHGIFAVDGEKWRQQRKLSSFEFSTRVLRDFS 146

Query:   147 SAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTR 206
              + FR+NA+KL   +SE A S K  D QDL M+ TLDSIFKV FGVEL  + G ++EG  
Sbjct:   147 CSVFRRNASKLVGFVSEFALSGKAFDAQDLLMRCTLDSIFKVGFGVELKCLDGFSKEGQE 206

Query:   207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDF 266
             F  AFD+ +  T  R++D  WK+K   NIGS+++LK+ I  ID FVY +I  K  ++   
Sbjct:   207 FMEAFDEGNVATSSRFIDPLWKLKWFFNIGSQSKLKKSIATIDKFVYSLITTKRKELA-- 264

Query:   267 QEEYTSVSQ 275
             +E+ T V +
Sbjct:   265 KEQNTVVRE 273
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2054960 CYP704A1 ""cytochrome P450, family 704, subfamily A, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007181 CYP704B1 ""cytochrome P450, family 704, subfamily B, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102639 CYP94D2 ""cytochrome P450, family 94, subfamily D, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009278 CYP94D1 ""cytochrome P450, family 94, subfamily D, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181579 AT5G08250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2114460 CYP94B3 "cytochrome P450, family 94, subfamily B, polypeptide 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166786 CYP86B1 ""cytochrome P450, family 86, subfamily B, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154558 CYP86A1 ""cytochrome P450, family 86, subfamily A, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167371 CYP94B1 ""cytochrome P450, family 94, subfamily B, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
PLN03195 516 PLN03195, PLN03195, fatty acid omega-hydroxylase; 2e-75
PLN02426 502 PLN02426, PLN02426, cytochrome P450, family 94, su 3e-43
PLN02169 500 PLN02169, PLN02169, fatty acid (omega-1)-hydroxyla 8e-19
pfam00067 461 pfam00067, p450, Cytochrome P450 2e-16
PLN02738 633 PLN02738, PLN02738, carotene beta-ring hydroxylase 4e-11
COG2124 411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 9e-09
PLN02936 489 PLN02936, PLN02936, epsilon-ring hydroxylase 4e-07
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 1e-04
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional Back     alignment and domain information 
 Score =  238 bits (609), Expect = 2e-75
 Identities = 113/271 (41%), Positives = 173/271 (63%), Gaps = 3/271 (1%)

Query: 6   IPFSFKALAIALAILVVQIVTKTLTQKSGNKQK--KYHPIGGTVFNQLLNFNRLHHYMTD 63
           + F    ++  L I +  +    + + S   +K  K  PI G    QL N++R+H ++ +
Sbjct: 1   MKFPVSGMSGVLFIALAVLSWIFIHRWSQRNRKGPKSWPIIGAALEQLKNYDRMHDWLVE 60

Query: 64  LAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDG 123
             +K  T  +  PF +  Y +DP NVE++LKTNF NY KG   +S ++ LLGDGIF VDG
Sbjct: 61  YLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVLLGDGIFNVDG 120

Query: 124 EKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLD 183
           E WR+QRK +S EF++K LRDFS+  FR+ + KL+ +LS+A+ +++++D+QDLFM+ TLD
Sbjct: 121 ELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLD 180

Query: 184 SIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQ 243
           SI KV FGVE+ ++  S  E   F+ AFD A+ +   R++D  WK+KK LNIGSEA L +
Sbjct: 181 SICKVGFGVEIGTLSPSLPE-NPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSK 239

Query: 244 RIEVIDTFVYKIIRKKTDQMHDFQEEYTSVS 274
            I+V+D F Y +IR++  +M + ++    V 
Sbjct: 240 SIKVVDDFTYSVIRRRKAEMDEARKSGKKVK 270

Length = 516
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 286
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.98
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.97
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 99.97
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.97
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.96
PLN02290 516 cytokinin trans-hydroxylase 99.96
PTZ00404 482 cytochrome P450; Provisional 99.96
PLN02687 517 flavonoid 3'-monooxygenase 99.96
PLN02971 543 tryptophan N-hydroxylase 99.96
PLN02183 516 ferulate 5-hydroxylase 99.95
PLN03112 514 cytochrome P450 family protein; Provisional 99.95
PLN03234 499 cytochrome P450 83B1; Provisional 99.95
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.95
PLN02500 490 cytochrome P450 90B1 99.94
PLN00168 519 Cytochrome P450; Provisional 99.94
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.93
PLN02966 502 cytochrome P450 83A1 99.93
PLN02196 463 abscisic acid 8'-hydroxylase 99.93
PLN03018 534 homomethionine N-hydroxylase 99.93
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.93
PLN02655 466 ent-kaurene oxidase 99.93
PLN02936 489 epsilon-ring hydroxylase 99.92
PLN02394 503 trans-cinnamate 4-monooxygenase 99.92
PLN02774 463 brassinosteroid-6-oxidase 99.92
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.91
PLN02738 633 carotene beta-ring hydroxylase 99.9
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.89
PLN02302 490 ent-kaurenoic acid oxidase 99.89
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.87
PLN02648 480 allene oxide synthase 99.77
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.51
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.45
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information 
Probab=99.98  E-value=3.2e-30  Score=239.58  Aligned_cols=264  Identities=23%  Similarity=0.353  Sum_probs=185.4

Q ss_pred             HHHHHHHHHHhhhh-hhcCCCCCCCCCcccchHHHhhccCChHHHHHHHHHhcC-ceEE---ecCCcceEEeCChhhHHH
Q 023159           17 LAILVVQIVTKTLT-QKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRL---LGPFRSEVYSSDPANVEY   91 (286)
Q Consensus        17 ~~~~~~~~~~~~~~-~~~~~PgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~yg-~~~~---~~~~~~~vvi~dPe~ik~   91 (286)
                      +++++.....++.+ ++++.|||+++|++||+..+.......++++.++..+|+ .+.+   +.++.+.++++|||++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~   93 (500)
T PLN02169         14 IFFLVCLFTCFFIHKKPHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHH   93 (500)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHH
Confidence            33444444333444 447999999999999985554333346677777766675 5543   446789999999999999


Q ss_pred             hhhcCCCCCCCCccchHhhhhhhccceeecCCchHHhhhhhccccCChHHHHHhH-HHHHHHHHHHHHHHHHHhhcCCCc
Q 023159           92 MLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFS-SAAFRKNAAKLAQLLSEAANSDKI  170 (286)
Q Consensus        92 Il~~~~~~~~k~~~~~~~~~~~~g~gl~~~~G~~Wk~~Rkil~paFs~~~l~~~~-~~~~~~~~~~l~~~l~~~~~~g~~  170 (286)
                      ||++++++|+++.. +....+++|+|+++++|+.||++||+++|+|+.++++.+. ...+.++++.+++.+++.+.+|++
T Consensus        94 il~~~~~~~~k~~~-~~~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  172 (500)
T PLN02169         94 ILSSNFGNYPKGPE-FKKIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENII  172 (500)
T ss_pred             HHhhCcccCCCcHH-HHHHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence            99998889999763 3344567899999999999999999999999999887632 134557778888888765455678


Q ss_pred             eehHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCChHHHHHHHHHHHHHHhhhhhH--HHHHHHhcCCchHHHHHHHHHH
Q 023159          171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIF--WKIKKLLNIGSEARLKQRIEVI  248 (286)
Q Consensus       171 vdv~~~~~~~tldii~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i  248 (286)
                      ||+.+.+.++|+|||++++||.+.+..+... ...+|.++++........+...|+  +.+..+++.+..++..++.+.+
T Consensus       173 vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  251 (500)
T PLN02169        173 IDLQDVFMRFMFDTSSILMTGYDPMSLSIEM-LEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATV  251 (500)
T ss_pred             EeHHHHHHHHHHHHHHhheeCCCccccCCCC-CCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHH
Confidence            9999999999999999999999886543211 124577666655443333333332  1222334445566778889999


Q ss_pred             HHHHHHHHHHHHHhhhhccccccCccchHHHhhh
Q 023159          249 DTFVYKIIRKKTDQMHDFQEEYTSVSQILYELTF  282 (286)
Q Consensus       249 ~~~~~~iI~~r~~~~~~~~~~~~~~~Dll~~l~~  282 (286)
                      +++++++|++|+++..++.+.+...+|+|+.|+-
T Consensus       252 ~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~  285 (500)
T PLN02169        252 NRMFAKIISSRRKEEISRAETEPYSKDALTYYMN  285 (500)
T ss_pred             HHHHHHHHHHHHHHhhccccccCCCcCHHHHHHh
Confidence            9999999999876532111100124688888764

>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
2q9f_A 456 Crystal Structure Of Human Cytochrome P450 46a1 In 6e-07
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex With Cholesterol-3-Sulphate Length = 456 Back     alignment and structure 
Iteration: 1

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 57  LHHYMTDLAAKHGTYRLLGPF-RSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLG 115
           L     D A K+G    +  F ++ V  + P +V+  L +    Y K S  Y  L+ + G
Sbjct: 12  LQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFG 69
Query: 116 DGIF------TVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDK 169
           + +F        + E+W +QR++    FS   L       F + A +L ++L   A+   
Sbjct: 70  ERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMET-FNEKAEQLVEILEAKADGQT 128
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNE 202
            + +QD+   + +D + K AFG+E   + G+ +
Sbjct: 129 PVSMQDMLTYTAMDILAKAAFGMETSMLLGAQK 161

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 2e-35
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 3e-33
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 1e-30
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 4e-27
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 5e-27
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 7e-26
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 6e-25
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 6e-23
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 5e-21
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 5e-21
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 1e-20
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 1e-17
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 2e-16
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 4e-14
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 1e-13
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 2e-11
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 4e-11
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 4e-09
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 4e-07
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 4e-05
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 7e-05
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 8e-05
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 8e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 1e-04
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 1e-04
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 3e-04
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 4e-04
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 5e-04
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
 Score =  132 bits (333), Expect = 2e-35
 Identities = 41/271 (15%), Positives = 88/271 (32%), Gaps = 17/271 (6%)

Query: 12  ALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVF-NQLLNFNRLHHYMTDLAAKHG- 69
           A    L +  + ++       S      Y    G +  +    +  +          +G 
Sbjct: 24  ATMPVLLLTGLFLLVWNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGE 83

Query: 70  TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY-NYSILKDLLGDGIFTVDGEKWRE 128
             R+       +  S  +++ +++K N  +   GS      +       IF  + E W+ 
Sbjct: 84  FMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKT 143

Query: 129 QRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKV 188
            R       S   L    +    ++       L E  N    +D+  L  +  LD+   +
Sbjct: 144 TRPFFMKALSGPGLVRMVTV-CAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSNTL 202

Query: 189 AFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVI 248
              + LD     +    +    FD  +   L    DIF+KI  L       + ++ ++ +
Sbjct: 203 FLRIPLD----ESAIVVKIQGYFD--AWQALLIKPDIFFKISWLYK-----KYEKSVKDL 251

Query: 249 DTFVYKII--RKKTDQMHDFQEEYTSVSQIL 277
              +  +I  +++     +  EE    +  L
Sbjct: 252 KDAIEVLIAEKRRRISTEEKLEECMDFATEL 282
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.95
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.95
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.94
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.94
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 99.94
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.93
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.93
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.93
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.93
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.93
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.93
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.92
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.92
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.92
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.92
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.91
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.91
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.91
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.9
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.9
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.89
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.87
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.86
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.86
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.84
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.83
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.83
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.82
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.79
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.77
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.75
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.74
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.72
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.72
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.71
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.71
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.7
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.7
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.7
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.69
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.68
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.67
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.67
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.67
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.67
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.66
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.65
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.65
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.65
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.64
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.63
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.63
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.63
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.62
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.62
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.62
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.62
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.62
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.62
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.62
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.61
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.61
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.59
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.57
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.56
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.55
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.53
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.52
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.51
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.5
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.44
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.4
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.38
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.3
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.11
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.01
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 98.19
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
Probab=99.95  E-value=3.7e-27  Score=216.31  Aligned_cols=246  Identities=14%  Similarity=0.170  Sum_probs=175.2

Q ss_pred             hhhhhcCCCCCCCCCcccchHHHhhc--cCChHHHHHHHHHhcC-ceEEecCCcceEEeCChhhHHHhhhcCCCCCCCCc
Q 023159           28 TLTQKSGNKQKKYHPIGGTVFNQLLN--FNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGS  104 (286)
Q Consensus        28 ~~~~~~~~PgP~~~pl~Gn~~~~~~~--~~~~~~~~~~~~~~yg-~~~~~~~~~~~vvi~dPe~ik~Il~~~~~~~~k~~  104 (286)
                      ..+....+|||+++|++||++.+...  ...++..+.+++++|| +++++.++.+.++++||+++++|+.++ ..|.+++
T Consensus        19 ~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~   97 (482)
T 3k9v_A           19 ETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRL   97 (482)
T ss_dssp             CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCC
T ss_pred             ccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCC
Confidence            44455789999999999997655431  2357889999999997 467777777899999999999999874 6777765


Q ss_pred             cchH--hhhh--hhccceeecCCchHHhhhhhccccC-ChHHHHHhHHHHHHHHHHHHHHHHHHhhc-CCCceehHHHHH
Q 023159          105 YNYS--ILKD--LLGDGIFTVDGEKWREQRKISSHEF-STKVLRDFSSAAFRKNAAKLAQLLSEAAN-SDKILDIQDLFM  178 (286)
Q Consensus       105 ~~~~--~~~~--~~g~gl~~~~G~~Wk~~Rkil~paF-s~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~g~~vdv~~~~~  178 (286)
                      ....  ....  ..|.|+++++|+.|+++||+++|+| +.+.++.+.+ .+.++++.+++.+.+... +|+++|+.+++.
T Consensus        98 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~-~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~  176 (482)
T 3k9v_A           98 EIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDK-KINEVLADFLERMDELCDERGRIPDLYSELN  176 (482)
T ss_dssp             CCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHH-HHHHHHHHHHHHHHHHCCTTSCCTTHHHHHH
T ss_pred             CchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCHHHHHH
Confidence            3211  1111  2467999999999999999999996 7888998875 678999999999987543 466899999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCC-cCCChHHHHHHHHHHHHHHhhhhhHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 023159          179 KSTLDSIFKVAFGVELDSVCGSN-EEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIR  257 (286)
Q Consensus       179 ~~tldii~~~~FG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iI~  257 (286)
                      .+|+|+|++++||.+++.+++.. ....++.+.+..+..........+ +.+..+++....++..+..+.+.+++.++|+
T Consensus       177 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~  255 (482)
T 3k9v_A          177 KWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTP-VELHKRLNTKVWQAHTLAWDTIFKSVKPCID  255 (482)
T ss_dssp             HHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSC-HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhh-HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999997665321 112346565555443222111112 1223334433345566677788889999999


Q ss_pred             HHHHhhhhccccccCccchHHHhh
Q 023159          258 KKTDQMHDFQEEYTSVSQILYELT  281 (286)
Q Consensus       258 ~r~~~~~~~~~~~~~~~Dll~~l~  281 (286)
                      +|+++.+++     ...|+|+.++
T Consensus       256 ~r~~~~~~~-----~~~d~l~~ll  274 (482)
T 3k9v_A          256 NRLQRYSQQ-----PGADFLCDIY  274 (482)
T ss_dssp             HHHHHTTTC-----TTSCHHHHHH
T ss_pred             HHHHHhccC-----CchHHHHHHH
Confidence            988654321     2355665544
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 286
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 3e-23
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 6e-21
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 5e-19
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 5e-18
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 5e-18
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 3e-15
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 3e-12
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 9e-09
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 1e-05
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 96.7 bits (239), Expect = 3e-23
 Identities = 37/229 (16%), Positives = 75/229 (32%), Gaps = 7/229 (3%)

Query: 39  KYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNF 97
              P+ G +    ++   L      L  K+G  + +    R  V       +   L    
Sbjct: 8   SPLPVLGNLL--QMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQA 65

Query: 98  DNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKL 157
           + +        +     G G+   +GE+WR  R+ S        +   S     +  A+ 
Sbjct: 66  EAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARC 125

Query: 158 AQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTR-FSSAFDDASA 216
                   +   +LD   LF   T + I  + FG   D            F  +F   S+
Sbjct: 126 LV-EELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISS 184

Query: 217 MTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHD 265
            +   +      +K     G+  ++ + ++ I+TF+ + + K    +  
Sbjct: 185 FSSQVFELFSGFLKHF--PGTHRQIYRNLQEINTFIGQSVEKHRATLDP 231
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.95
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.94
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.91
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.88
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.87
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.86
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.86
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.76
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.52
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.48
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.48
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.44
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.38
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.32
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.14
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.14
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.12
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.09
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 98.78
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 98.62
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 98.5
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=99.95  E-value=6.1e-28  Score=217.91  Aligned_cols=220  Identities=17%  Similarity=0.231  Sum_probs=161.7

Q ss_pred             cCCCCCCCCCcccchHHHhhccCChHHHHHHHHHhcCc-eEEecCCcceEEeCChhhHHHhhhcCCCCCCCCccchHhhh
Q 023159           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK  111 (286)
Q Consensus        33 ~~~PgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~vvi~dPe~ik~Il~~~~~~~~k~~~~~~~~~  111 (286)
                      +.+|||+++|++||++ .+. .++++..+.+++++||+ |+++.++.+.++++||++|++++.++...+..+. ....+.
T Consensus         1 r~iPGP~~~p~lG~l~-~l~-~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~-~~~~~~   77 (453)
T d2ij2a1           1 KEMPQPKTFGELKNLP-LLN-TDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQ-ALKFVR   77 (453)
T ss_dssp             CCCCCCCCCGGGTTGG-GGC-SSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCH-HHHHHH
T ss_pred             CCCccCCCcchhhCHH-HhC-CCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCccccccc-HhHHHH
Confidence            4689999999999974 442 45689999999999975 7888888899999999999999977654555544 345567


Q ss_pred             hhhccceee--cCCchHHhhhhhccccCChHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHH
Q 023159          112 DLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVA  189 (286)
Q Consensus       112 ~~~g~gl~~--~~G~~Wk~~Rkil~paFs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vdv~~~~~~~tldii~~~~  189 (286)
                      ++.|+|+++  .+|+.||++||+++|+|+.++++.+.+ .+.++++++++.|.+. .+++++|+.+++..+++|++++++
T Consensus        78 ~~~g~~~~~~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~-~i~~~~~~li~~l~~~-~~~~~idl~~~~~~~~~~~i~~~~  155 (453)
T d2ij2a1          78 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHA-MMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCG  155 (453)
T ss_dssp             HHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHH-HHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCcEEecCCChHHHHHHHHHHHHHhhhhhhhhhhh-hHHHHHHHHHHHhhhc-CCCCccchHHHHHHHhhhcchhcc
Confidence            788999886  489999999999999999999999985 6789999999999754 456799999999999999999999


Q ss_pred             hcCCCCCCCCCCcCCChHHHHHHHHHHHHHHhhhh--hHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 023159          190 FGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVD--IFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM  263 (286)
Q Consensus       190 FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iI~~r~~~~  263 (286)
                      ||.+++++.+.  ...++...+..........+..  ++.+    ......+++.+..+.++++++++|++|+++.
T Consensus       156 fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~  225 (453)
T d2ij2a1         156 FNYRFNSFYRD--QPHPFITSMVRALDEAMNKLQRANPDDP----AYDENKRQFQEDIKVMNDLVDKIIADRKASG  225 (453)
T ss_dssp             HSCCCCGGGCS--SCCHHHHHHHHHHHHHHHTC---CTTSG----GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cccccchhhhc--cchHHHHhhhhccchhhhhhhhcccccc----cchhhHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            99998765432  1233332222222211111111  1100    0011234556677788899999988877654
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure