Query 023160
Match_columns 286
No_of_seqs 291 out of 1537
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 08:51:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023160.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023160hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4569 Predicted lipase [Lipi 100.0 1.7E-42 3.6E-47 325.8 19.9 236 7-248 79-326 (336)
2 PLN02802 triacylglycerol lipas 100.0 7.1E-41 1.5E-45 322.8 19.6 201 17-231 230-455 (509)
3 PLN02934 triacylglycerol lipas 100.0 1.1E-39 2.3E-44 314.5 20.5 170 17-193 206-420 (515)
4 cd00519 Lipase_3 Lipase (class 100.0 2.1E-39 4.6E-44 288.3 20.2 168 17-189 50-217 (229)
5 PLN02454 triacylglycerol lipas 100.0 2.3E-39 5E-44 307.6 19.2 170 17-193 110-321 (414)
6 PLN02324 triacylglycerol lipas 100.0 2.9E-39 6.3E-44 306.6 19.3 168 17-193 112-313 (415)
7 PLN02310 triacylglycerol lipas 100.0 8.8E-39 1.9E-43 303.2 19.1 171 18-193 113-313 (405)
8 PLN02761 lipase class 3 family 100.0 3E-38 6.4E-43 305.2 17.9 175 17-193 191-409 (527)
9 PLN02571 triacylglycerol lipas 100.0 7.9E-38 1.7E-42 297.4 19.4 168 17-193 125-323 (413)
10 PLN00413 triacylglycerol lipas 100.0 1.4E-37 3E-42 298.1 20.6 180 7-193 172-383 (479)
11 PLN02408 phospholipase A1 100.0 1.1E-37 2.3E-42 293.0 18.7 175 17-193 97-320 (365)
12 PLN02719 triacylglycerol lipas 100.0 1E-37 2.2E-42 301.0 19.0 174 17-193 191-411 (518)
13 PLN03037 lipase class 3 family 100.0 1.5E-37 3.2E-42 300.3 19.9 173 18-192 216-423 (525)
14 PLN02753 triacylglycerol lipas 100.0 1.4E-37 3.1E-42 300.7 19.3 175 17-193 206-425 (531)
15 PLN02162 triacylglycerol lipas 100.0 5E-36 1.1E-40 286.8 19.2 173 17-195 183-380 (475)
16 PF01764 Lipase_3: Lipase (cla 100.0 1.8E-32 4E-37 224.7 14.4 136 33-171 1-139 (140)
17 PLN02847 triacylglycerol lipas 100.0 1.6E-27 3.4E-32 233.1 15.7 145 20-171 168-320 (633)
18 cd00741 Lipase Lipase. Lipase 99.9 8.4E-27 1.8E-31 195.1 14.7 151 70-230 1-153 (153)
19 PF11187 DUF2974: Protein of u 99.6 1.1E-14 2.4E-19 129.9 11.5 128 20-169 25-155 (224)
20 COG3675 Predicted lipase [Lipi 99.2 1.1E-12 2.5E-17 118.7 -0.4 161 20-189 83-261 (332)
21 KOG4540 Putative lipase essent 99.0 7.3E-10 1.6E-14 100.8 7.5 48 84-138 261-308 (425)
22 COG5153 CVT17 Putative lipase 99.0 7.3E-10 1.6E-14 100.8 7.5 48 84-138 261-308 (425)
23 COG3675 Predicted lipase [Lipi 98.7 5.1E-09 1.1E-13 95.2 2.3 135 26-184 181-318 (332)
24 PF01083 Cutinase: Cutinase; 97.7 0.00016 3.5E-09 62.3 8.6 58 82-139 64-123 (179)
25 KOG2088 Predicted lipase/calmo 97.5 2.7E-05 5.7E-10 78.6 1.2 139 21-166 169-322 (596)
26 PF07819 PGAP1: PGAP1-like pro 97.2 0.00086 1.9E-08 59.9 6.8 58 84-142 65-127 (225)
27 PF05057 DUF676: Putative seri 97.1 0.001 2.2E-08 59.0 5.7 61 82-142 59-129 (217)
28 PF06259 Abhydrolase_8: Alpha/ 97.0 0.0029 6.4E-08 54.6 7.9 84 82-170 91-175 (177)
29 PHA02857 monoglyceride lipase; 97.0 0.0054 1.2E-07 55.1 9.5 52 83-139 81-132 (276)
30 COG2267 PldB Lysophospholipase 96.9 0.0029 6.4E-08 58.8 7.2 67 69-142 79-145 (298)
31 cd00707 Pancreat_lipase_like P 96.8 0.0035 7.5E-08 57.6 6.7 77 82-163 93-174 (275)
32 PLN02733 phosphatidylcholine-s 96.6 0.0041 9E-08 61.0 6.3 62 83-144 146-207 (440)
33 PRK10749 lysophospholipase L2; 96.5 0.0042 9.2E-08 58.0 5.6 54 82-140 114-167 (330)
34 PF06028 DUF915: Alpha/beta hy 96.5 0.0069 1.5E-07 55.3 6.8 58 83-140 87-145 (255)
35 TIGR01607 PST-A Plasmodium sub 96.3 0.0043 9.4E-08 58.3 4.4 26 95-120 137-163 (332)
36 KOG2564 Predicted acetyltransf 96.3 0.0031 6.8E-08 58.0 3.3 39 80-119 128-166 (343)
37 COG3208 GrsT Predicted thioest 96.3 0.014 3E-07 52.7 7.3 102 30-139 9-113 (244)
38 PF00561 Abhydrolase_1: alpha/ 96.3 0.011 2.3E-07 50.6 6.2 50 83-137 28-78 (230)
39 PRK11126 2-succinyl-6-hydroxy- 96.2 0.011 2.5E-07 51.5 6.4 37 84-120 51-87 (242)
40 PLN02652 hydrolase; alpha/beta 96.0 0.018 3.8E-07 55.8 7.1 55 82-139 191-245 (395)
41 PLN02298 hydrolase, alpha/beta 96.0 0.019 4.2E-07 53.2 7.0 38 82-119 115-154 (330)
42 PF00975 Thioesterase: Thioest 96.0 0.023 4.9E-07 49.5 6.9 58 81-139 48-105 (229)
43 PRK10985 putative hydrolase; P 95.9 0.016 3.6E-07 53.9 6.3 53 83-138 115-168 (324)
44 PLN02511 hydrolase 95.9 0.037 8.1E-07 53.2 8.8 55 81-137 155-209 (388)
45 PF05990 DUF900: Alpha/beta hy 95.9 0.13 2.7E-06 46.2 11.6 139 28-170 16-171 (233)
46 TIGR01838 PHA_synth_I poly(R)- 95.9 0.026 5.6E-07 56.7 7.9 57 82-138 245-302 (532)
47 TIGR02427 protocat_pcaD 3-oxoa 95.8 0.014 3E-07 49.9 4.8 35 85-119 65-99 (251)
48 PRK13604 luxD acyl transferase 95.8 0.014 3.1E-07 54.6 5.0 51 82-140 92-142 (307)
49 PF12697 Abhydrolase_6: Alpha/ 95.8 0.025 5.5E-07 47.2 6.2 49 85-138 52-101 (228)
50 PF02450 LCAT: Lecithin:choles 95.7 0.021 4.5E-07 55.2 6.2 64 82-146 103-168 (389)
51 PF05277 DUF726: Protein of un 95.7 0.07 1.5E-06 50.8 9.5 72 97-168 218-291 (345)
52 TIGR03695 menH_SHCHC 2-succiny 95.7 0.018 4E-07 48.9 5.1 32 89-120 60-91 (251)
53 PLN02385 hydrolase; alpha/beta 95.7 0.04 8.7E-07 51.7 7.7 38 82-119 143-182 (349)
54 PRK11071 esterase YqiA; Provis 95.6 0.02 4.3E-07 49.5 4.9 35 86-120 48-82 (190)
55 PLN02965 Probable pheophorbida 95.6 0.018 3.8E-07 51.4 4.6 37 84-120 56-93 (255)
56 KOG1455 Lysophospholipase [Lip 95.5 0.044 9.5E-07 51.0 7.0 39 81-119 109-149 (313)
57 KOG2088 Predicted lipase/calmo 95.5 0.0069 1.5E-07 61.4 1.8 132 23-171 310-445 (596)
58 TIGR01250 pro_imino_pep_2 prol 95.5 0.051 1.1E-06 47.6 7.2 36 85-120 82-117 (288)
59 TIGR01836 PHA_synth_III_C poly 95.4 0.03 6.4E-07 52.8 5.9 50 84-138 121-171 (350)
60 PLN02824 hydrolase, alpha/beta 95.3 0.024 5.2E-07 51.5 4.8 35 86-120 89-123 (294)
61 PRK10673 acyl-CoA esterase; Pr 95.3 0.028 6.1E-07 49.3 5.0 30 91-120 73-102 (255)
62 TIGR03101 hydr2_PEP hydrolase, 95.2 0.063 1.4E-06 49.3 7.2 59 82-147 83-143 (266)
63 PF00326 Peptidase_S9: Prolyl 95.2 0.085 1.8E-06 45.7 7.5 38 82-119 45-84 (213)
64 TIGR03100 hydr1_PEP hydrolase, 95.1 0.14 3.1E-06 46.5 9.1 37 82-118 82-119 (274)
65 TIGR03611 RutD pyrimidine util 95.1 0.036 7.7E-07 47.9 4.9 34 87-120 68-101 (257)
66 TIGR03230 lipo_lipase lipoprot 95.0 0.068 1.5E-06 52.5 7.0 75 83-162 101-180 (442)
67 PF06342 DUF1057: Alpha/beta h 95.0 0.12 2.6E-06 47.9 8.1 85 30-120 35-125 (297)
68 TIGR02240 PHA_depoly_arom poly 95.0 0.038 8.2E-07 49.8 4.9 32 89-120 81-112 (276)
69 TIGR03343 biphenyl_bphD 2-hydr 94.9 0.041 8.8E-07 49.2 5.0 34 87-120 89-122 (282)
70 PRK03204 haloalkane dehalogena 94.9 0.055 1.2E-06 49.4 5.9 36 84-119 86-121 (286)
71 TIGR03056 bchO_mg_che_rel puta 94.7 0.04 8.6E-07 48.7 4.3 34 86-119 82-115 (278)
72 TIGR01840 esterase_phb esteras 94.7 0.045 9.8E-07 47.7 4.6 52 84-139 78-131 (212)
73 PRK14875 acetoin dehydrogenase 94.7 0.094 2E-06 48.9 7.0 36 84-119 182-217 (371)
74 PF12695 Abhydrolase_5: Alpha/ 94.7 0.068 1.5E-06 42.6 5.2 34 97-136 59-93 (145)
75 PF08237 PE-PPE: PE-PPE domain 94.6 0.18 3.9E-06 45.1 8.3 53 97-149 46-100 (225)
76 KOG4409 Predicted hydrolase/ac 94.6 0.054 1.2E-06 51.4 5.0 42 81-122 142-183 (365)
77 PRK00870 haloalkane dehalogena 94.5 0.058 1.2E-06 49.3 5.0 35 86-120 102-136 (302)
78 COG4782 Uncharacterized protei 94.4 0.55 1.2E-05 44.8 11.4 142 28-172 114-270 (377)
79 PLN02894 hydrolase, alpha/beta 94.3 0.088 1.9E-06 50.9 6.0 36 85-120 162-197 (402)
80 PLN02211 methyl indole-3-aceta 94.1 0.07 1.5E-06 48.6 4.7 32 88-119 75-107 (273)
81 TIGR01249 pro_imino_pep_1 prol 94.0 0.081 1.8E-06 48.6 5.0 37 84-120 80-116 (306)
82 PRK03592 haloalkane dehalogena 93.9 0.14 3E-06 46.5 6.2 32 89-120 83-114 (295)
83 PRK10566 esterase; Provisional 93.9 0.075 1.6E-06 46.8 4.3 36 84-119 90-127 (249)
84 TIGR01392 homoserO_Ac_trn homo 93.9 0.086 1.9E-06 49.6 5.0 37 84-120 111-148 (351)
85 PF00151 Lipase: Lipase; Inte 93.9 0.13 2.7E-06 48.8 5.9 82 82-163 131-214 (331)
86 PF07859 Abhydrolase_3: alpha/ 93.8 0.12 2.7E-06 44.3 5.3 54 83-137 50-108 (211)
87 PLN02442 S-formylglutathione h 93.6 0.11 2.3E-06 47.8 4.9 38 83-120 127-164 (283)
88 TIGR01738 bioH putative pimelo 93.6 0.094 2E-06 44.6 4.3 22 99-120 65-86 (245)
89 PF05728 UPF0227: Uncharacteri 93.5 0.13 2.8E-06 44.7 4.9 37 84-120 44-80 (187)
90 PRK11460 putative hydrolase; P 93.5 0.12 2.7E-06 45.9 4.9 36 84-119 86-123 (232)
91 KOG3724 Negative regulator of 93.3 0.088 1.9E-06 54.6 4.0 41 98-139 181-221 (973)
92 TIGR02821 fghA_ester_D S-formy 93.3 0.14 2.9E-06 46.7 5.0 36 85-120 121-159 (275)
93 COG3319 Thioesterase domains o 93.1 0.15 3.2E-06 46.7 4.8 43 81-123 47-89 (257)
94 COG0429 Predicted hydrolase of 93.0 0.34 7.3E-06 45.8 7.1 82 28-118 72-168 (345)
95 PF10503 Esterase_phd: Esteras 92.9 0.12 2.7E-06 46.1 4.0 38 85-122 81-120 (220)
96 TIGR01839 PHA_synth_II poly(R) 92.8 0.23 5.1E-06 50.1 6.1 56 83-138 272-328 (560)
97 PRK08775 homoserine O-acetyltr 92.7 0.16 3.5E-06 47.5 4.7 35 86-120 124-159 (343)
98 PLN02679 hydrolase, alpha/beta 92.6 0.17 3.7E-06 47.9 4.8 30 89-118 145-174 (360)
99 PRK10349 carboxylesterase BioH 92.6 0.17 3.6E-06 44.8 4.4 22 98-119 73-94 (256)
100 PLN02578 hydrolase 92.5 0.19 4E-06 47.5 4.9 36 82-121 139-174 (354)
101 PRK07581 hypothetical protein; 92.4 0.23 4.9E-06 46.3 5.3 40 82-121 106-146 (339)
102 KOG4372 Predicted alpha/beta h 92.4 0.054 1.2E-06 52.2 1.0 92 28-123 78-174 (405)
103 PF01674 Lipase_2: Lipase (cla 92.4 0.15 3.3E-06 45.5 3.8 36 83-119 60-95 (219)
104 PLN03087 BODYGUARD 1 domain co 92.3 0.28 6.1E-06 48.8 6.0 29 91-119 266-294 (481)
105 PF02230 Abhydrolase_2: Phosph 92.1 0.32 6.8E-06 42.5 5.6 43 97-143 103-145 (216)
106 KOG1454 Predicted hydrolase/ac 92.1 0.3 6.5E-06 46.1 5.6 36 86-121 115-150 (326)
107 PF05677 DUF818: Chlamydia CHL 91.6 0.33 7.3E-06 46.1 5.3 20 98-117 214-233 (365)
108 PRK00175 metX homoserine O-ace 91.6 0.28 6.1E-06 46.8 5.0 37 84-120 131-168 (379)
109 PLN00021 chlorophyllase 91.6 0.35 7.6E-06 45.3 5.5 23 99-121 126-148 (313)
110 PF05448 AXE1: Acetyl xylan es 91.2 0.48 1E-05 44.6 6.0 38 98-141 174-211 (320)
111 PF03959 FSH1: Serine hydrolas 91.0 0.48 1E-05 41.5 5.5 82 84-166 88-175 (212)
112 COG0596 MhpC Predicted hydrola 90.9 0.32 7E-06 40.6 4.2 36 86-121 75-110 (282)
113 COG3545 Predicted esterase of 90.8 0.89 1.9E-05 39.3 6.7 55 83-142 44-98 (181)
114 PRK06489 hypothetical protein; 90.7 0.42 9E-06 45.1 5.1 25 96-120 150-175 (360)
115 PLN02517 phosphatidylcholine-s 90.6 0.38 8.2E-06 48.9 4.9 59 84-142 198-267 (642)
116 PRK06765 homoserine O-acetyltr 90.5 0.36 7.8E-06 46.6 4.6 38 84-121 145-183 (389)
117 COG1075 LipA Predicted acetylt 90.3 0.54 1.2E-05 44.5 5.5 62 81-144 109-170 (336)
118 COG4814 Uncharacterized protei 90.0 0.54 1.2E-05 43.0 4.9 54 84-137 121-175 (288)
119 PF09752 DUF2048: Uncharacteri 89.9 0.65 1.4E-05 44.2 5.6 46 96-146 172-217 (348)
120 PRK10162 acetyl esterase; Prov 89.7 0.43 9.3E-06 44.5 4.3 25 98-122 153-177 (318)
121 PF00756 Esterase: Putative es 89.6 0.34 7.3E-06 42.8 3.3 43 81-124 98-140 (251)
122 PTZ00472 serine carboxypeptida 89.3 0.6 1.3E-05 46.2 5.1 59 81-139 150-216 (462)
123 PF11288 DUF3089: Protein of u 89.1 0.93 2E-05 40.1 5.6 56 82-137 77-135 (207)
124 PRK05855 short chain dehydroge 88.9 0.54 1.2E-05 46.5 4.5 22 98-119 93-114 (582)
125 PF10230 DUF2305: Uncharacteri 88.5 1.4 3E-05 40.3 6.6 58 80-139 60-122 (266)
126 PLN02872 triacylglycerol lipas 88.0 0.68 1.5E-05 44.9 4.5 32 83-115 145-176 (395)
127 smart00824 PKS_TE Thioesterase 87.8 1.2 2.5E-05 37.2 5.4 30 93-122 58-87 (212)
128 KOG2385 Uncharacterized conser 87.7 2.4 5.3E-05 42.3 8.0 75 95-169 443-519 (633)
129 PF03583 LIP: Secretory lipase 87.4 1.4 3E-05 40.8 6.0 56 83-139 49-113 (290)
130 PRK05077 frsA fermentation/res 87.3 1.5 3.1E-05 42.7 6.3 35 98-137 264-299 (414)
131 KOG2382 Predicted alpha/beta h 87.0 0.65 1.4E-05 43.6 3.5 40 64-110 95-134 (315)
132 COG0657 Aes Esterase/lipase [L 86.8 1.4 3.1E-05 40.6 5.7 26 98-123 151-176 (312)
133 PLN03084 alpha/beta hydrolase 86.7 1.3 2.8E-05 42.7 5.6 50 84-137 182-231 (383)
134 COG2945 Predicted hydrolase of 86.5 1.2 2.7E-05 39.0 4.7 53 82-140 85-138 (210)
135 COG3571 Predicted hydrolase of 86.3 0.92 2E-05 39.0 3.8 37 86-122 76-112 (213)
136 COG1647 Esterase/lipase [Gener 86.3 1.8 4E-05 38.8 5.8 52 81-139 68-119 (243)
137 PF03403 PAF-AH_p_II: Platelet 86.0 0.63 1.4E-05 44.8 3.0 20 99-118 228-247 (379)
138 PLN02980 2-oxoglutarate decarb 85.7 1 2.2E-05 51.3 4.9 37 84-120 1430-1466(1655)
139 KOG3101 Esterase D [General fu 85.3 0.13 2.8E-06 45.9 -2.0 79 98-193 140-224 (283)
140 PRK07868 acyl-CoA synthetase; 85.1 1.8 3.8E-05 46.9 6.2 49 84-137 127-176 (994)
141 PF03283 PAE: Pectinacetyleste 84.9 1.7 3.7E-05 41.7 5.3 107 86-193 141-257 (361)
142 KOG4627 Kynurenine formamidase 84.2 2 4.3E-05 38.4 5.0 38 83-120 119-157 (270)
143 PRK04940 hypothetical protein; 83.7 1.7 3.8E-05 37.6 4.4 22 99-120 60-81 (180)
144 KOG1838 Alpha/beta hydrolase [ 83.4 1.2 2.7E-05 43.2 3.7 32 82-113 181-212 (409)
145 PF08840 BAAT_C: BAAT / Acyl-C 82.4 3.9 8.4E-05 36.0 6.2 29 92-120 12-43 (213)
146 TIGR03502 lipase_Pla1_cef extr 82.3 1.6 3.5E-05 46.0 4.3 24 96-119 552-575 (792)
147 TIGR00976 /NonD putative hydro 82.3 2.6 5.6E-05 42.4 5.7 38 82-119 79-117 (550)
148 COG3673 Uncharacterized conser 82.0 9.4 0.0002 36.3 8.7 62 81-148 103-165 (423)
149 COG3458 Acetyl esterase (deace 81.8 1 2.3E-05 41.6 2.4 37 82-118 157-195 (321)
150 KOG2369 Lecithin:cholesterol a 80.9 1.6 3.4E-05 43.1 3.4 32 85-116 168-199 (473)
151 COG3150 Predicted esterase [Ge 79.8 3 6.5E-05 36.0 4.4 63 82-151 42-104 (191)
152 PF01738 DLH: Dienelactone hyd 79.5 2.3 5E-05 36.9 3.7 37 83-119 80-118 (218)
153 PF06821 Ser_hydrolase: Serine 78.3 6.1 0.00013 33.6 5.9 20 98-117 54-73 (171)
154 KOG1552 Predicted alpha/beta h 77.1 2.9 6.3E-05 38.2 3.7 39 81-119 111-150 (258)
155 COG4757 Predicted alpha/beta h 76.4 1.3 2.9E-05 40.1 1.3 52 65-117 72-123 (281)
156 COG3509 LpqC Poly(3-hydroxybut 75.0 4.3 9.2E-05 38.0 4.3 38 85-122 128-167 (312)
157 PRK10439 enterobactin/ferric e 74.3 4 8.7E-05 39.8 4.1 26 99-124 288-313 (411)
158 PF11144 DUF2920: Protein of u 73.5 4.7 0.0001 39.2 4.3 35 84-118 165-203 (403)
159 COG0400 Predicted esterase [Ge 73.4 6.7 0.00014 34.7 5.0 40 83-122 81-122 (207)
160 KOG3975 Uncharacterized conser 72.1 9.8 0.00021 35.0 5.7 37 80-116 90-127 (301)
161 COG1506 DAP2 Dipeptidyl aminop 71.9 4.3 9.4E-05 41.6 3.9 38 82-120 454-494 (620)
162 KOG3847 Phospholipase A2 (plat 70.7 1.5 3.2E-05 41.5 0.2 20 99-118 241-260 (399)
163 PF06057 VirJ: Bacterial virul 70.4 12 0.00026 32.8 5.7 56 81-137 50-105 (192)
164 COG3243 PhaC Poly(3-hydroxyalk 70.2 6.7 0.00015 38.4 4.5 43 81-123 163-205 (445)
165 PRK10252 entF enterobactin syn 69.2 12 0.00027 41.1 6.9 27 96-122 1130-1156(1296)
166 PF12048 DUF3530: Protein of u 68.4 25 0.00054 32.9 7.9 61 92-152 186-246 (310)
167 COG2819 Predicted hydrolase of 67.5 8.6 0.00019 35.3 4.4 35 100-139 138-172 (264)
168 COG0412 Dienelactone hydrolase 65.0 8.5 0.00018 34.4 3.9 36 83-119 94-132 (236)
169 PF00450 Peptidase_S10: Serine 64.0 25 0.00055 33.2 7.3 63 80-142 114-184 (415)
170 TIGR01849 PHB_depoly_PhaZ poly 63.8 15 0.00033 35.9 5.6 38 101-138 170-208 (406)
171 KOG4391 Predicted alpha/beta h 61.8 2.1 4.6E-05 38.5 -0.6 23 98-120 148-170 (300)
172 KOG4178 Soluble epoxide hydrol 61.4 17 0.00036 34.4 5.2 52 84-139 98-149 (322)
173 PF12740 Chlorophyllase2: Chlo 60.8 9.7 0.00021 34.9 3.5 22 100-121 92-113 (259)
174 KOG2112 Lysophospholipase [Lip 60.3 15 0.00033 32.4 4.5 25 97-121 91-115 (206)
175 cd00312 Esterase_lipase Estera 60.1 14 0.0003 36.3 4.8 33 87-119 162-196 (493)
176 PF00091 Tubulin: Tubulin/FtsZ 60.0 28 0.0006 30.5 6.2 46 81-126 106-155 (216)
177 TIGR02802 Pal_lipo peptidoglyc 59.3 44 0.00095 25.4 6.6 55 84-138 17-83 (104)
178 KOG2029 Uncharacterized conser 58.4 24 0.00052 36.1 6.0 69 31-121 479-548 (697)
179 PF02089 Palm_thioest: Palmito 58.1 32 0.0007 31.9 6.5 38 100-141 81-119 (279)
180 COG0627 Predicted esterase [Ge 57.4 8.6 0.00019 36.2 2.6 21 100-120 153-173 (316)
181 PLN02633 palmitoyl protein thi 56.9 26 0.00057 33.0 5.7 40 100-143 95-136 (314)
182 PF10081 Abhydrolase_9: Alpha/ 54.2 1.1E+02 0.0023 28.6 9.1 83 83-167 90-187 (289)
183 PRK10802 peptidoglycan-associa 54.1 47 0.001 28.3 6.5 57 83-139 85-153 (173)
184 PLN02606 palmitoyl-protein thi 53.3 33 0.00071 32.3 5.7 40 100-143 96-137 (306)
185 PF05577 Peptidase_S28: Serine 53.0 26 0.00056 34.0 5.3 61 85-149 96-159 (434)
186 PF12715 Abhydrolase_7: Abhydr 51.9 12 0.00027 36.2 2.7 26 93-118 217-245 (390)
187 cd02189 delta_tubulin The tubu 48.4 39 0.00084 33.3 5.7 48 80-127 107-158 (446)
188 PF10340 DUF2424: Protein of u 48.2 48 0.001 32.0 6.2 39 84-122 180-218 (374)
189 PHA02637 TNF-alpha-receptor-li 48.1 73 0.0016 26.0 6.2 103 156-270 14-117 (127)
190 COG4188 Predicted dienelactone 47.8 19 0.00041 34.7 3.3 33 83-115 137-175 (365)
191 PF07224 Chlorophyllase: Chlor 47.6 13 0.00028 34.5 2.0 24 98-121 119-142 (307)
192 COG2885 OmpA Outer membrane pr 47.6 71 0.0015 27.2 6.7 61 83-143 99-173 (190)
193 KOG1516 Carboxylesterase and r 46.2 30 0.00065 34.5 4.6 21 98-118 194-214 (545)
194 PF09994 DUF2235: Uncharacteri 45.9 39 0.00085 30.9 5.0 41 80-120 72-113 (277)
195 PF00135 COesterase: Carboxyle 45.5 33 0.00071 33.5 4.7 33 87-119 194-228 (535)
196 PRK03482 phosphoglycerate muta 45.2 48 0.001 28.7 5.3 38 81-120 125-162 (215)
197 PF07082 DUF1350: Protein of u 44.5 49 0.0011 30.2 5.3 36 99-136 90-125 (250)
198 PF01713 Smr: Smr domain; Int 44.3 96 0.0021 22.6 6.1 60 83-142 13-75 (83)
199 COG5023 Tubulin [Cytoskeleton] 43.4 45 0.00098 32.3 5.0 61 80-140 111-176 (443)
200 PF14353 CpXC: CpXC protein 42.6 33 0.00071 27.5 3.6 33 6-38 35-70 (128)
201 COG1909 Uncharacterized protei 42.2 51 0.0011 28.1 4.7 53 80-140 90-142 (167)
202 TIGR03162 ribazole_cobC alpha- 41.8 65 0.0014 26.6 5.5 37 81-119 120-156 (177)
203 COG2021 MET2 Homoserine acetyl 41.3 50 0.0011 31.8 5.0 41 79-120 127-168 (368)
204 cd00286 Tubulin_FtsZ Tubulin/F 39.4 50 0.0011 30.8 4.8 45 81-125 71-119 (328)
205 PRK15004 alpha-ribazole phosph 39.2 72 0.0016 27.3 5.4 38 81-120 124-161 (199)
206 PLN03016 sinapoylglucose-malat 38.6 54 0.0012 32.3 5.0 57 83-139 146-210 (433)
207 PF06500 DUF1100: Alpha/beta h 38.3 90 0.0019 30.6 6.4 41 92-137 251-295 (411)
208 PF14253 AbiH: Bacteriophage a 37.8 17 0.00036 32.6 1.2 20 98-117 234-253 (270)
209 PRK13463 phosphatase PhoE; Pro 36.3 84 0.0018 27.0 5.4 37 81-119 126-162 (203)
210 PF04019 DUF359: Protein of un 36.0 95 0.0021 25.1 5.2 53 80-140 45-97 (121)
211 PLN02209 serine carboxypeptida 35.9 66 0.0014 31.7 5.1 58 82-139 147-212 (437)
212 cd02188 gamma_tubulin Gamma-tu 35.8 91 0.002 30.6 6.1 47 80-126 111-161 (431)
213 PLN02213 sinapoylglucose-malat 35.4 92 0.002 29.0 5.9 57 83-139 32-96 (319)
214 cd02186 alpha_tubulin The tubu 35.0 80 0.0017 31.0 5.6 46 80-125 112-161 (434)
215 PF08538 DUF1749: Protein of u 35.0 1.1E+02 0.0023 28.9 6.1 55 83-137 88-146 (303)
216 COG2382 Fes Enterochelin ester 34.5 28 0.00061 32.6 2.1 25 100-124 178-202 (299)
217 PTZ00387 epsilon tubulin; Prov 33.7 77 0.0017 31.5 5.2 47 80-126 112-162 (465)
218 cd02190 epsilon_tubulin The tu 33.6 79 0.0017 30.5 5.2 47 80-126 80-130 (379)
219 PLN00220 tubulin beta chain; P 32.6 72 0.0016 31.4 4.8 47 80-126 111-161 (447)
220 PTZ00335 tubulin alpha chain; 32.5 80 0.0017 31.2 5.1 47 80-126 113-163 (448)
221 PRK13980 NAD synthetase; Provi 32.2 2.1E+02 0.0046 25.8 7.6 78 82-161 14-93 (265)
222 smart00827 PKS_AT Acyl transfe 32.0 53 0.0012 29.7 3.6 24 94-117 77-100 (298)
223 cd06059 Tubulin The tubulin su 31.9 81 0.0017 30.3 5.0 46 80-125 70-119 (382)
224 PF00698 Acyl_transf_1: Acyl t 31.6 38 0.00082 31.3 2.6 26 91-116 76-101 (318)
225 KOG2551 Phospholipase/carboxyh 31.4 58 0.0013 29.3 3.5 82 82-165 88-176 (230)
226 COG0331 FabD (acyl-carrier-pro 30.7 55 0.0012 30.7 3.5 17 97-113 83-99 (310)
227 COG4099 Predicted peptidase [G 30.2 75 0.0016 30.2 4.1 35 85-119 252-289 (387)
228 PTZ00010 tubulin beta chain; P 30.1 1.2E+02 0.0025 30.0 5.8 55 70-126 103-161 (445)
229 KOG2624 Triglyceride lipase-ch 30.0 34 0.00074 33.4 2.0 54 84-139 146-199 (403)
230 PRK08384 thiamine biosynthesis 29.8 53 0.0012 31.8 3.3 29 85-114 272-300 (381)
231 cd01714 ETF_beta The electron 29.8 74 0.0016 27.7 4.0 38 84-122 95-136 (202)
232 cd00553 NAD_synthase NAD+ synt 29.6 2.3E+02 0.0051 25.2 7.3 77 83-161 8-86 (248)
233 PF13173 AAA_14: AAA domain 29.4 58 0.0012 25.7 3.0 31 83-113 74-104 (128)
234 cd02187 beta_tubulin The tubul 29.2 96 0.0021 30.3 5.0 56 70-127 102-161 (425)
235 cd07185 OmpA_C-like Peptidogly 28.8 73 0.0016 23.8 3.4 25 86-110 21-45 (106)
236 PLN00221 tubulin alpha chain; 28.7 1.3E+02 0.0028 29.8 5.8 55 70-126 105-163 (450)
237 TIGR03131 malonate_mdcH malona 28.7 65 0.0014 29.3 3.6 24 94-117 71-94 (295)
238 PLN00222 tubulin gamma chain; 27.9 1.4E+02 0.0031 29.5 6.0 47 80-126 113-163 (454)
239 PF00300 His_Phos_1: Histidine 27.8 1.2E+02 0.0027 23.9 4.8 32 81-114 125-157 (158)
240 PRK14119 gpmA phosphoglyceromu 27.6 1.3E+02 0.0029 26.4 5.3 37 81-119 155-193 (228)
241 TIGR03350 type_VI_ompA type VI 27.3 2.5E+02 0.0053 22.5 6.4 23 84-107 47-69 (137)
242 COG3007 Uncharacterized paraqu 26.5 1.7E+02 0.0036 27.8 5.7 57 80-139 19-79 (398)
243 TIGR03848 MSMEG_4193 probable 26.4 1.5E+02 0.0032 25.4 5.3 37 82-120 123-164 (204)
244 KOG1515 Arylacetamide deacetyl 25.5 2.3E+02 0.0049 27.0 6.7 43 98-140 165-208 (336)
245 PF12242 Eno-Rase_NADH_b: NAD( 25.1 2.1E+02 0.0046 21.4 5.0 39 82-120 20-61 (78)
246 PF10686 DUF2493: Protein of u 24.6 2.7E+02 0.0059 20.0 6.0 43 84-134 19-63 (71)
247 KOG2183 Prolylcarboxypeptidase 24.4 82 0.0018 31.1 3.5 46 67-115 136-183 (492)
248 TIGR00128 fabD malonyl CoA-acy 24.1 84 0.0018 28.2 3.4 20 98-117 82-101 (290)
249 PF00733 Asn_synthase: Asparag 23.3 2.9E+02 0.0063 23.7 6.7 71 82-157 3-75 (255)
250 PRK10510 putative outer membra 23.1 96 0.0021 27.5 3.5 24 84-107 129-152 (219)
251 COG4474 Uncharacterized protei 22.4 3.5E+02 0.0076 23.3 6.5 49 81-131 27-76 (180)
252 PRK15416 lipopolysaccharide co 21.9 2.8E+02 0.006 24.4 6.1 34 85-120 138-171 (201)
253 KOG4667 Predicted esterase [Li 21.5 63 0.0014 29.3 1.9 22 101-122 107-128 (269)
254 PRK15408 autoinducer 2-binding 21.1 2.6E+02 0.0056 26.1 6.2 52 83-138 194-245 (336)
255 cd07067 HP_PGM_like Histidine 21.0 2.3E+02 0.005 22.5 5.2 34 84-119 85-118 (153)
256 KOG1282 Serine carboxypeptidas 20.9 1.9E+02 0.0042 28.7 5.4 59 81-139 147-213 (454)
257 PF00919 UPF0004: Uncharacteri 20.9 1.3E+02 0.0029 23.1 3.4 37 82-123 52-89 (98)
258 PTZ00123 phosphoglycerate muta 20.8 2.2E+02 0.0048 25.2 5.4 38 81-120 142-181 (236)
259 PRK13462 acid phosphatase; Pro 20.6 2.2E+02 0.0047 24.6 5.2 37 81-119 122-158 (203)
260 cd06543 GH18_PF-ChiA-like PF-C 20.5 3.2E+02 0.0069 25.4 6.5 23 83-105 124-146 (294)
261 PF00691 OmpA: OmpA family; I 20.2 1.2E+02 0.0026 22.4 3.0 52 86-138 17-82 (97)
No 1
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-42 Score=325.80 Aligned_cols=236 Identities=36% Similarity=0.528 Sum_probs=195.2
Q ss_pred eeeeecCCCC---CCccEEEEEECCCCeEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhhhchHH
Q 023160 7 LFTWTCSRCD---GLTKGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRP 83 (286)
Q Consensus 7 ~~~w~C~~c~---~~~~gyV~~~~~~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~~~~~ 83 (286)
+.+|.|.... +.+.|||+++++++.||||||||. +..+|+.|+.....+..-+....++|+.||+++|.. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~~gy~av~~d~~~IvvafRGt~--~~~q~~~e~~~~~~~~~~~~~~~g~v~~~f~~~~~~-~~~~ 155 (336)
T KOG4569|consen 79 LPSIFCDLVGSYQSNCSGYTAVSDDRKAIVVAFRGTN--TPLQWIAEFDKSLFPSKPFFPDGGKVEAYFLDAYTS-LWNS 155 (336)
T ss_pred cccccccccccccCceEEEEEEecCCcEEEEEEccCC--ChHHHHHHHHhhhccccccccCCceEEEeccchhcc-ccHH
Confidence 4457787776 789999999999999999999998 789999998754443322222579999999999974 3457
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcC--CcceEEEEecCCcccChhHHHHHhhcCCCEEEEEEC
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLG--IQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNY 161 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~--~~~v~~~TFG~PrvGn~~fa~~~~~~~~~~~riv~~ 161 (286)
++.+.++.++.+||+++|+|||||||||||+|+|.+++.+.. ...++++|||+|||||.+|+++++++++.++||||.
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRvGn~~fa~~~d~~~~~s~Rvv~~ 235 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRVGNLAFAEWHDELVPYSFRVVHR 235 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCcccHHHHHHHHhhCCcEEEEEcC
Confidence 899999999999999999999999999999999999988743 358899999999999999999999999999999999
Q ss_pred CCcccccCCCCCCCCCCCeeecCeeEE-EccCCCCccccceeeecCCCCCC-CCCcCC-CCCCcccC----cccccceee
Q 023160 162 HDIVPHLPPYYSYFPQKTYHHFPREVW-LYHIGLGSLIYEVEKICDGSGED-PSCSRS-VTGNSVSD----HLVYFGVRM 234 (286)
Q Consensus 162 ~DiVP~lP~~~~~~~~~~y~H~g~ev~-~~~~~~g~~~y~~~~~C~~~~ed-~~Cs~~-~~~~si~d----H~~Yfg~~~ 234 (286)
+|+|||||+.........|.|+++|+| +.+.+.....| .+|++..++ +.|+++ ....++.| |..||++.+
T Consensus 236 ~DiVP~lP~~~~~~g~~~~~h~~~ei~~~~~~~~~~~~~---~~c~~~~~~~~~cs~~~~~~~~~~~~~~~h~~yf~~~~ 312 (336)
T KOG4569|consen 236 RDIVPHLPGIVSHVGTELYYHHRTEVWLYNNNMNLEDPY---HICDGADGEDPLCSDRNKALDSLEDGLLVHGHYFGVDI 312 (336)
T ss_pred CCCCCCCCCccccCCcccccccCcceeccccccCcccce---ehhccCCCCCccccccchhhhhhhhcccccchhhhecc
Confidence 999999999843334568999999999 66655333334 899986444 689997 33456677 999999999
Q ss_pred CCcCccCCcccccc
Q 023160 235 GCNEWTPCRIVMDP 248 (286)
Q Consensus 235 ~~~~~~~C~~~~~~ 248 (286)
.+.+...|...+-.
T Consensus 313 ~~~~~~~c~~~~~~ 326 (336)
T KOG4569|consen 313 KGYGKNGCPKVTTL 326 (336)
T ss_pred hhHHhcCCCCcccc
Confidence 98888899865553
No 2
>PLN02802 triacylglycerol lipase
Probab=100.00 E-value=7.1e-41 Score=322.78 Aligned_cols=201 Identities=29% Similarity=0.441 Sum_probs=160.7
Q ss_pred CCccEEEEEECC--------CCeEEEEEcCCCCCChhHHHhhccccccccCCC-----CCCCceEehhhHHHhhhh----
Q 023160 17 GLTKGFLGVAKD--------LNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYP-----GMSDAMVHHGFYSAYHNT---- 79 (286)
Q Consensus 17 ~~~~gyV~~~~~--------~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p-----~~~~~~VH~GF~~~~~~~---- 79 (286)
..+.||||++++ ++.||||||||. ++.||++||++..++.... .+.+++||+||++.|...
T Consensus 230 snw~GYVAV~~de~~~~rlGRRdIVVAFRGT~--s~~dWi~DL~~~lvp~~~~~~~~~~~~~~kVH~GFl~~Yts~~~~~ 307 (509)
T PLN02802 230 SSWVGYVAVCDSPREIRRMGRRDIVIALRGTA--TCLEWAENLRAGLVPMPGDDDDAGDQEQPKVECGFLSLYKTAGAHV 307 (509)
T ss_pred cCceeEEEEcCCchhhhccCCceEEEEEcCCC--CHHHHHHHhccceeecCcccccccCCCcchHHHHHHHHHHhhcccc
Confidence 457899999986 479999999998 8999999998876654321 245799999999999742
Q ss_pred -chHHHHHHHHHHHHHHcCC--cEEEEeccChhHHHHHHHHHHhhhhcCCc-ceEEEEecCCcccChhHHHHHhhcCCCE
Q 023160 80 -TIRPAIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVNLGIQ-NVQVMTFGQPRIGNAAFASYYTQLVPNT 155 (286)
Q Consensus 80 -~~~~~~~~~l~~~~~~~~~--~~I~vTGHSLGGAlA~L~a~~l~~~~~~~-~v~~~TFG~PrvGn~~fa~~~~~~~~~~ 155 (286)
.+++++++.|++++++|++ ++|+|||||||||||+|+|++|+...... .|.+||||+|||||.+|++++++...+.
T Consensus 308 ~S~reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN~aFA~~~~~~~~~~ 387 (509)
T PLN02802 308 PSLSESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGNRAFADRLNARGVKV 387 (509)
T ss_pred chHHHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcccHHHHHHHHhcCCcE
Confidence 4688999999999999974 68999999999999999999998764432 6899999999999999999998877789
Q ss_pred EEEEECCCcccccCCCCCC--CCCCCeeecCeeEEEccCCCCccccceeeecCCCCCCCCCcCCCCCCcccCcc--cccc
Q 023160 156 FRVTNYHDIVPHLPPYYSY--FPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCSRSVTGNSVSDHL--VYFG 231 (286)
Q Consensus 156 ~riv~~~DiVP~lP~~~~~--~~~~~y~H~g~ev~~~~~~~g~~~y~~~~~C~~~~ed~~Cs~~~~~~si~dH~--~Yfg 231 (286)
+||+|..|+||++|+.... +..++|.|+|.|+||+... ..| . ...+|+.|+. .+....|+ +|-|
T Consensus 388 ~RVVN~~DiVP~lPp~~~~~~~~~~gY~HvG~El~Id~~~---SPy---l---k~~~d~~c~H---~Le~YlHlv~G~~g 455 (509)
T PLN02802 388 LRVVNAQDVVTRVPGIAPREELHKWAYAHVGAELRLDSKM---SPY---L---RPDADVACCH---DLEAYLHLVDGFLG 455 (509)
T ss_pred EEEecCCCeecccCccccccccCCcCceecCEEEEECCCC---Ccc---c---cCCCCcccch---hHHHHHhhhccccc
Confidence 9999999999999986321 1125899999999997754 223 1 2257899974 23445555 3444
No 3
>PLN02934 triacylglycerol lipase
Probab=100.00 E-value=1.1e-39 Score=314.52 Aligned_cols=170 Identities=31% Similarity=0.434 Sum_probs=141.1
Q ss_pred CCccEEEEEECC--CCeEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhh----------h-----
Q 023160 17 GLTKGFLGVAKD--LNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHN----------T----- 79 (286)
Q Consensus 17 ~~~~gyV~~~~~--~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~----------~----- 79 (286)
.+|+|||++|+. .+.||||||||.+.++.||++|+++...+ +|. .|+||.||+++|.. +
T Consensus 206 ~~TqaFi~~Dk~~d~~~IVVAFRGT~p~s~~dWiTDldfs~~~--~p~--~gkVH~GF~~A~~l~~~~~~~tf~~~l~~~ 281 (515)
T PLN02934 206 MSTQVFIFCDKPKDANLIVISFRGTEPFDADDWGTDFDYSWYE--IPK--VGKVHMGFLEAMGLGNRDDTTTFQTSLQTK 281 (515)
T ss_pred CCceEEEEEccccCCceEEEEECCCCcCCHHHHhhccCccccC--CCC--CCeecHHHHHHHhhhccccccchhhhhhhc
Confidence 468999999984 49999999999987899999999876653 454 38999999999951 0
Q ss_pred --------------------chHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcC----CcceEEEEec
Q 023160 80 --------------------TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLG----IQNVQVMTFG 135 (286)
Q Consensus 80 --------------------~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~----~~~v~~~TFG 135 (286)
..+.++.+.|++++++||+++|+|||||||||||+|+|.+|..... ...+.+||||
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~Ay~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFG 361 (515)
T PLN02934 282 ATSELKEEESKKNLLEMVERSAYYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFG 361 (515)
T ss_pred cccccccccccccccccchhhHHHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeC
Confidence 1123578889999999999999999999999999999988765421 1246899999
Q ss_pred CCcccChhHHHHHhhcC----CCEEEEEECCCcccccCCCCCCCCCCCeeecCeeEEEccCC
Q 023160 136 QPRIGNAAFASYYTQLV----PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 136 ~PrvGn~~fa~~~~~~~----~~~~riv~~~DiVP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 193 (286)
+|||||.+|++++++.. .+.+||||.+|+||+||+... .++|+|+|.|+|+++..
T Consensus 362 sPRVGN~~FA~~~~~~~~~~~~~~~RVVn~~DiVPrLP~~~~---~~gY~H~G~ev~y~s~y 420 (515)
T PLN02934 362 QPRIGNRQLGKFMEAQLNYPVPRYFRVVYCNDLVPRLPYDDK---TFLYKHFGVCLYYDSRY 420 (515)
T ss_pred CCCccCHHHHHHHHHhhcCCCccEEEEEECCCcccccCCCCC---CcceEeCCeeEEEcCCC
Confidence 99999999999998864 358999999999999997531 25899999999997654
No 4
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=100.00 E-value=2.1e-39 Score=288.35 Aligned_cols=168 Identities=43% Similarity=0.724 Sum_probs=148.3
Q ss_pred CCccEEEEEECCCCeEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhhhchHHHHHHHHHHHHHHc
Q 023160 17 GLTKGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFY 96 (286)
Q Consensus 17 ~~~~gyV~~~~~~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~ 96 (286)
..+.|||++|++.+.|+|+||||. ++.||++|+....++.....+.+++||+||+++|. .+..++...++++++++
T Consensus 50 ~~~~~~i~~~~~~~~ivva~RGT~--~~~d~~~d~~~~~~~~~~~~~~~~~vh~Gf~~~~~--~~~~~~~~~~~~~~~~~ 125 (229)
T cd00519 50 YDTQGYVAVDHDRKTIVIAFRGTV--SLADWLTDLDFSPVPLDPPLCSGGKVHSGFYSAYK--SLYNQVLPELKSALKQY 125 (229)
T ss_pred CCceEEEEEECCCCeEEEEEeCCC--chHHHHHhcccccccCCCCCCCCcEEcHHHHHHHH--HHHHHHHHHHHHHHhhC
Confidence 357899999999999999999998 79999999987766544334678999999999998 56788889999999999
Q ss_pred CCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHhhcCCCEEEEEECCCcccccCCCCCCCC
Q 023160 97 GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSYFP 176 (286)
Q Consensus 97 ~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~~~~~~~~riv~~~DiVP~lP~~~~~~~ 176 (286)
|+++|+|||||||||+|+|+++++....+..++.++|||+||+||.+|+++.+......+||+|.+|+||+||+.... .
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg~~~~a~~~~~~~~~~~rvv~~~D~Vp~lp~~~~~-~ 204 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVGNAAFAEYLESTKGRVYRVVHGNDIVPRLPPGSLT-P 204 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCCCHHHHHHhhccCCCEEEEEECCCcccccCccccc-C
Confidence 999999999999999999999999876556789999999999999999999888778899999999999999987311 1
Q ss_pred CCCeeecCeeEEE
Q 023160 177 QKTYHHFPREVWL 189 (286)
Q Consensus 177 ~~~y~H~g~ev~~ 189 (286)
..+|.|++.|||+
T Consensus 205 ~~~~~h~~~e~~~ 217 (229)
T cd00519 205 PEGYTHVGTEVWI 217 (229)
T ss_pred CcccEecCceEEE
Confidence 1589999999999
No 5
>PLN02454 triacylglycerol lipase
Probab=100.00 E-value=2.3e-39 Score=307.60 Aligned_cols=170 Identities=24% Similarity=0.399 Sum_probs=145.2
Q ss_pred CCccEEEEEECCC-------CeEEEEEcCCCCCChhHHHhhccccccccC--------------------CCCCCCceEe
Q 023160 17 GLTKGFLGVAKDL-------NAIVIAFRGTQEHSIQNWIEDLFWKQLDIN--------------------YPGMSDAMVH 69 (286)
Q Consensus 17 ~~~~gyV~~~~~~-------~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~--------------------~p~~~~~~VH 69 (286)
..+.||||++++. +.||||||||. +..||++||.+.+++.. -+.+.+|+||
T Consensus 110 snw~GYVAV~~d~~~~~lGrrdIvVafRGT~--t~~eWi~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kVH 187 (414)
T PLN02454 110 SNWIGYIAVTSDERTKALGRREIYVAWRGTT--RNYEWVDVLGAKLTSADPLLPGPEQDGVVSGSSSDSDDDDEKGPKVM 187 (414)
T ss_pred CceeEEEEEcCCccccccCcceEEEEECCCC--cHHHHHHhccccccccccccCccccccccccccccccCCCCCCcEEe
Confidence 4578999999864 59999999998 89999999998766532 1346789999
Q ss_pred hhhHHHhhh---------hchHHHHHHHHHHHHHHcCCcE--EEEeccChhHHHHHHHHHHhhhhcC---CcceEEEEec
Q 023160 70 HGFYSAYHN---------TTIRPAIINAVERAKDFYGDLN--IMVTGHSMGGAMAAFCGLDLTVNLG---IQNVQVMTFG 135 (286)
Q Consensus 70 ~GF~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~--I~vTGHSLGGAlA~L~a~~l~~~~~---~~~v~~~TFG 135 (286)
+||+++|.. ..+++++++.|++++++||+.+ |+|||||||||||+|+|++++.+.. ...|.+||||
T Consensus 188 ~GF~~~Yts~~~~~~f~~~S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFG 267 (414)
T PLN02454 188 LGWLTIYTSDDPRSPFTKLSARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFG 267 (414)
T ss_pred HhHHHHhhccCccccchhHHHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeC
Confidence 999999962 2578899999999999999765 9999999999999999999986531 2358899999
Q ss_pred CCcccChhHHHHHhhcC-CCEEEEEECCCcccccCCCCCCCCCCCeeecCeeEEEccCC
Q 023160 136 QPRIGNAAFASYYTQLV-PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 136 ~PrvGn~~fa~~~~~~~-~~~~riv~~~DiVP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 193 (286)
+|||||.+|++++++.. -+.+||+|..|+||+||+.. ++|+|+|.||||+...
T Consensus 268 sPRVGN~~Fa~~~~~~~~~rvlrVvN~~DiVP~lPp~~-----~gY~HvG~El~id~~~ 321 (414)
T PLN02454 268 SPQVGNKEFNDRFKEHPNLKILHVRNTIDLIPHYPGGL-----LGYVNTGTELVIDTRK 321 (414)
T ss_pred CCcccCHHHHHHHHhCCCceEEEEecCCCeeeeCCCCc-----CCccccCeEEEECCCC
Confidence 99999999999999874 36789999999999999873 6899999999997653
No 6
>PLN02324 triacylglycerol lipase
Probab=100.00 E-value=2.9e-39 Score=306.64 Aligned_cols=168 Identities=26% Similarity=0.492 Sum_probs=144.1
Q ss_pred CCccEEEEEECC-------CCeEEEEEcCCCCCChhHHHhhcccccccc--CCCCC---CCceEehhhHHHhhh------
Q 023160 17 GLTKGFLGVAKD-------LNAIVIAFRGTQEHSIQNWIEDLFWKQLDI--NYPGM---SDAMVHHGFYSAYHN------ 78 (286)
Q Consensus 17 ~~~~gyV~~~~~-------~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~--~~p~~---~~~~VH~GF~~~~~~------ 78 (286)
..+.||||++.+ ++.||||||||. ++.||++||++.+++. .+|++ .+++||+||++.|..
T Consensus 112 s~w~GYVAv~~d~~~~~lGrrdIVVafRGT~--t~~eWi~Dl~~~~~~~~~~~p~~~~~~~~kVH~GFl~~Yts~~~~~~ 189 (415)
T PLN02324 112 TNWMGYIAVATDQGKAMLGRRDIVVAWRGTL--QPYEWANDFDFPLESAISVFPVTDPKDNPRIGSGWLDIYTASDSRSP 189 (415)
T ss_pred cceeEEEEEeCCccccccCCceEEEEEccCC--CHHHHHHHhccccccccccCCCCCCCCCceeehhHHHHhcCcCcccc
Confidence 457899999887 349999999998 8999999999877653 35654 368999999999973
Q ss_pred ---hchHHHHHHHHHHHHHHcCC--cEEEEeccChhHHHHHHHHHHhhhhc----------CCcceEEEEecCCcccChh
Q 023160 79 ---TTIRPAIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVNL----------GIQNVQVMTFGQPRIGNAA 143 (286)
Q Consensus 79 ---~~~~~~~~~~l~~~~~~~~~--~~I~vTGHSLGGAlA~L~a~~l~~~~----------~~~~v~~~TFG~PrvGn~~ 143 (286)
.++++++++.|++++++||+ ++|+|||||||||||+|+|+++..+. ....|.+||||+|||||.+
T Consensus 190 f~k~SareqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN~~ 269 (415)
T PLN02324 190 YDTTSAQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGDHN 269 (415)
T ss_pred cchhHHHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCCHH
Confidence 25789999999999999985 78999999999999999999997531 1345889999999999999
Q ss_pred HHHHHhhcC-CCEEEEEECCCcccccCCCCCCCCCCCeeecCeeEEEccCC
Q 023160 144 FASYYTQLV-PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 144 fa~~~~~~~-~~~~riv~~~DiVP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 193 (286)
|++++++.. .+.+||+|..|+||+||+. +|.|+|.|+||+...
T Consensus 270 Fa~~~~~~~~~~~~RVvn~~D~VP~lP~~-------~Y~hvG~el~Id~~~ 313 (415)
T PLN02324 270 FKNLVDSLQPLNILRIVNVPDVAPHYPLL-------LYTEIGEVLEINTLN 313 (415)
T ss_pred HHHHHHhcCCcceEEEEeCCCcCCcCCCc-------ccccCceEEEEcCCC
Confidence 999999865 4689999999999999985 799999999998643
No 7
>PLN02310 triacylglycerol lipase
Probab=100.00 E-value=8.8e-39 Score=303.24 Aligned_cols=171 Identities=30% Similarity=0.514 Sum_probs=145.5
Q ss_pred CccEEEEEECCC-------CeEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhhh---------ch
Q 023160 18 LTKGFLGVAKDL-------NAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNT---------TI 81 (286)
Q Consensus 18 ~~~gyV~~~~~~-------~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~---------~~ 81 (286)
.+.||||++++. +.||||||||. +..||++|+++...+. .+.+++||+||+++|... ++
T Consensus 113 ~w~GYVAv~~d~~~~~lGrrdIVVAfRGT~--s~~dWi~Dl~~~l~~~---~~~~~kVH~GF~~~Y~s~~~~~~~~~~sa 187 (405)
T PLN02310 113 NWMGYVAVSRDEESQRIGRRDIMVAWRGTV--APSEWFLDLETKLEHI---DNTNVKVQEGFLKIYKSKDESTRYNKLSA 187 (405)
T ss_pred ceeEEEEEcCCcccccCCCceEEEEECCCC--CHHHHHHhcccceecC---CCCCCEeeHhHHHHHhCcCcccccccchH
Confidence 468999999864 49999999998 8999999998866543 246799999999999742 36
Q ss_pred HHHHHHHHHHHHHHcC----CcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHhhcCCCEEE
Q 023160 82 RPAIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFR 157 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~----~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~~~~~~~~r 157 (286)
+.++++.|++++++|+ +++|+|||||||||||+|+|++++...+...+.+||||+|||||.+|++++++...+.+|
T Consensus 188 ~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~~~~~~~R 267 (405)
T PLN02310 188 SEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAFKEKLNELGVKTLR 267 (405)
T ss_pred HHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHHHHHHHhcCCCEEE
Confidence 7899999999988774 689999999999999999999998766666789999999999999999999998788999
Q ss_pred EEECCCcccccCCCCCCC----------CCCCeeecCeeEEEccCC
Q 023160 158 VTNYHDIVPHLPPYYSYF----------PQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 158 iv~~~DiVP~lP~~~~~~----------~~~~y~H~g~ev~~~~~~ 193 (286)
|+|..|+||+|||....+ ..+.|.|+|.|++|+...
T Consensus 268 Vvn~~DiVP~lPp~~~~~~~~~~~~~~~~~~~Y~HvG~el~lD~~~ 313 (405)
T PLN02310 268 VVVKQDKVPKLPGLLNKMLNKFHGLTGKLNWVYRHVGTQLKLDAFS 313 (405)
T ss_pred EEECCCccCccCcchhhchhhhccccccCceeEeccceEEEECCCC
Confidence 999999999999853110 125799999999998653
No 8
>PLN02761 lipase class 3 family protein
Probab=100.00 E-value=3e-38 Score=305.25 Aligned_cols=175 Identities=30% Similarity=0.460 Sum_probs=148.8
Q ss_pred CCccEEEEEECCC--------CeEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhh---------h
Q 023160 17 GLTKGFLGVAKDL--------NAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHN---------T 79 (286)
Q Consensus 17 ~~~~gyV~~~~~~--------~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~---------~ 79 (286)
..+.||||++.+. +.||||||||. ++.||++|+.+.+++..++++++++||+||++.|.. .
T Consensus 191 snw~GYVAV~~de~~~~rlGRRdIVVAfRGT~--t~~EWi~DL~~~lvpa~~~~~~~~kVH~GFls~Yts~~~~~~~~k~ 268 (527)
T PLN02761 191 ANWMGYVAVATDEEEVKRLGRRDIVIAWRGTV--TYLEWIYDLKDILCSANFGDDPSIKIELGFHDLYTKKEDSCKFSSF 268 (527)
T ss_pred CceeEEEEEcCCcchhcccCCceEEEEEcCCC--cHHHHHHhccccccccCCCCCCchhHHHHHHHHhhccCccccccch
Confidence 3478999999875 46999999998 899999999988777667777889999999999973 2
Q ss_pred chHHHHHHHHHHHHHHc------CCcEEEEeccChhHHHHHHHHHHhhhhc--------CCcceEEEEecCCcccChhHH
Q 023160 80 TIRPAIINAVERAKDFY------GDLNIMVTGHSMGGAMAAFCGLDLTVNL--------GIQNVQVMTFGQPRIGNAAFA 145 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~------~~~~I~vTGHSLGGAlA~L~a~~l~~~~--------~~~~v~~~TFG~PrvGn~~fa 145 (286)
++++++++.|++++++| ++++|+|||||||||||+|+|++++... ....|.+||||+|||||.+|+
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN~~FA 348 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGNLRFK 348 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCCHHHH
Confidence 57899999999999888 3589999999999999999999997531 122489999999999999999
Q ss_pred HHHhhcCCCEEEEEECCCcccccCCCCCC-------------CCCCCeeecCeeEEEccCC
Q 023160 146 SYYTQLVPNTFRVTNYHDIVPHLPPYYSY-------------FPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 146 ~~~~~~~~~~~riv~~~DiVP~lP~~~~~-------------~~~~~y~H~g~ev~~~~~~ 193 (286)
++++++..+.+||+|..|+||++|+.... ...++|.|+|.|+.++...
T Consensus 349 ~~~d~l~~~~lRVvN~~D~VP~lP~~~~~e~~~~~~~~~~~~~~~~~Y~hVG~EL~iD~~~ 409 (527)
T PLN02761 349 ERCDELGVKVLRVVNVHDKVPSVPGIFTNEKFQFQKYVEEKTSFPWSYAHVGVELALDHKK 409 (527)
T ss_pred HHHHhcCCcEEEEEcCCCCcCCCCcccccccchhhhhhhccccCcceeeeeeeEEEEcCCC
Confidence 99999877899999999999999985310 0125799999999998653
No 9
>PLN02571 triacylglycerol lipase
Probab=100.00 E-value=7.9e-38 Score=297.40 Aligned_cols=168 Identities=30% Similarity=0.554 Sum_probs=140.8
Q ss_pred CCccEEEEEECCC-------CeEEEEEcCCCCCChhHHHhhccccccccC-C-CCC-CCceEehhhHHHhhh--------
Q 023160 17 GLTKGFLGVAKDL-------NAIVIAFRGTQEHSIQNWIEDLFWKQLDIN-Y-PGM-SDAMVHHGFYSAYHN-------- 78 (286)
Q Consensus 17 ~~~~gyV~~~~~~-------~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~-~-p~~-~~~~VH~GF~~~~~~-------- 78 (286)
..+.||||++++. +.||||||||. ++.||++|+.+.+++.. . +.. .+++||+||+++|..
T Consensus 125 s~w~GYVAv~~de~~~~lGrrdIVVAfRGT~--t~~eWi~Dl~~~lv~~~~~~g~~~~~~kVH~GF~~~Yts~~~~~~~~ 202 (413)
T PLN02571 125 SNWMGYVAVATDEGKALLGRRDIVIAWRGTV--QTLEWVNDFEFNLVSASKIFGESNDQPKVHQGWYSIYTSDDERSPFN 202 (413)
T ss_pred CceeEEEEEeCCccccccCCceEEEEEcCCC--CHHHHHHhcccceeccccccCCCCCCceeeehHHHhhhccccccccc
Confidence 3478999999865 57999999998 89999999998776542 1 111 359999999999963
Q ss_pred -hchHHHHHHHHHHHHHHcCC--cEEEEeccChhHHHHHHHHHHhhhh-cC--------CcceEEEEecCCcccChhHHH
Q 023160 79 -TTIRPAIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVN-LG--------IQNVQVMTFGQPRIGNAAFAS 146 (286)
Q Consensus 79 -~~~~~~~~~~l~~~~~~~~~--~~I~vTGHSLGGAlA~L~a~~l~~~-~~--------~~~v~~~TFG~PrvGn~~fa~ 146 (286)
+.+++++++.|++++++|++ .+|+|||||||||||+|+|++++.. +. ...|.++|||+|||||.+|++
T Consensus 203 k~Sar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN~~Fa~ 282 (413)
T PLN02571 203 KTSARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGDSDFKK 282 (413)
T ss_pred hhhHHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccCHHHHH
Confidence 25789999999999999986 4799999999999999999999753 11 124789999999999999999
Q ss_pred HHhhcC-CCEEEEEECCCcccccCCCCCCCCCCCeeecCeeEEEccCC
Q 023160 147 YYTQLV-PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 147 ~~~~~~-~~~~riv~~~DiVP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 193 (286)
++++.. .+.+||+|.+|+||++|+. +|.|+|.|+||+...
T Consensus 283 ~~~~~~~~~~~RVvN~~DiVP~lP~~-------gY~HvG~El~id~~~ 323 (413)
T PLN02571 283 LFSGLKDLRVLRVRNLPDVIPNYPLI-------GYSDVGEELPIDTRK 323 (413)
T ss_pred HHhcccCccEEEEEeCCCCCCcCCCC-------CCEecceEEEEeCCC
Confidence 999874 4689999999999999973 899999999997643
No 10
>PLN00413 triacylglycerol lipase
Probab=100.00 E-value=1.4e-37 Score=298.14 Aligned_cols=180 Identities=24% Similarity=0.347 Sum_probs=144.9
Q ss_pred eeeeecCCCC---CCccEEEEEEC--CCCeEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhhh--
Q 023160 7 LFTWTCSRCD---GLTKGFLGVAK--DLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNT-- 79 (286)
Q Consensus 7 ~~~w~C~~c~---~~~~gyV~~~~--~~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~-- 79 (286)
+.-|+|..|. ..|+.|+..|. +.+.||||||||.+.++.||++|+++...+ ++ ..++||.||+++|...
T Consensus 172 ~~fy~c~n~~~~~~~tqa~~~~D~~~d~n~IVVAFRGT~p~s~~DWitDldf~~~~--~~--~~gkVH~GF~~Al~~~k~ 247 (479)
T PLN00413 172 LGFYSCPNDFDKQRSTEVIVIKDTKDDPNLIIVSFRGTDPFDADDWCTDLDLSWHE--VK--NVGKIHGGFMKALGLPKE 247 (479)
T ss_pred eeeeeccccccccccceEEEEEcccCCCCeEEEEecCCCCCCHHHHHhhccccccC--CC--CCceeehhHHHhhccccc
Confidence 3456888874 46899998774 568999999999977899999999875433 22 4689999999998410
Q ss_pred -----------------chHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcC----CcceEEEEecCCc
Q 023160 80 -----------------TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLG----IQNVQVMTFGQPR 138 (286)
Q Consensus 80 -----------------~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~----~~~v~~~TFG~Pr 138 (286)
....++.+.|+++++++|+++|+|||||||||||+|+|+++....+ .....+||||+||
T Consensus 248 ~w~~~~~~~~~~~~~~~~ayy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 248 GWPEEINLDETQNATSLLAYYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred ccccccccccccccchhhhHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 0233678889999999999999999999999999999998764321 1234799999999
Q ss_pred ccChhHHHHHhhcCC----CEEEEEECCCcccccCCCCCCCCCCCeeecCeeEEEccCC
Q 023160 139 IGNAAFASYYTQLVP----NTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 139 vGn~~fa~~~~~~~~----~~~riv~~~DiVP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 193 (286)
|||.+||+++++... ..+||||.+|+|||||+... .+.|+|+|+|+|++...
T Consensus 328 VGN~~FA~~~~~~l~~~~~~~~RvVn~~DiVPrLP~~~~---~~~y~H~G~el~yds~y 383 (479)
T PLN00413 328 VGDEDFGIFMKDKLKEFDVKYERYVYCNDMVPRLPFDDK---TLMFKHFGACLYCDSFY 383 (479)
T ss_pred CccHHHHHHHHhhhcccCcceEEEEECCCccCCcCCCCC---CCceEecceEEEEeccc
Confidence 999999999987642 58999999999999998632 24799999999996654
No 11
>PLN02408 phospholipase A1
Probab=100.00 E-value=1.1e-37 Score=292.96 Aligned_cols=175 Identities=30% Similarity=0.532 Sum_probs=145.3
Q ss_pred CCccEEEEEECCCC--------eEEEEEcCCCCCChhHHHhhccccccccCCCC--------CCCceEehhhHHHhhhh-
Q 023160 17 GLTKGFLGVAKDLN--------AIVIAFRGTQEHSIQNWIEDLFWKQLDINYPG--------MSDAMVHHGFYSAYHNT- 79 (286)
Q Consensus 17 ~~~~gyV~~~~~~~--------~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~--------~~~~~VH~GF~~~~~~~- 79 (286)
..+.||||++++.+ .||||||||. ++.||++||.+.+++..... ..+++||+||++.|...
T Consensus 97 s~w~GyVAv~~d~~~i~rlGrrdIVVafRGT~--s~~dWi~DL~~~l~~~p~~~~~~~~~~~~~~~kVH~GFl~~Yts~~ 174 (365)
T PLN02408 97 SSWIGYVAVCQDKEEIARLGRRDVVIAFRGTA--TCLEWLENLRATLTRLPNAPTDMNGSGDGSGPMVESGFLSLYTSGT 174 (365)
T ss_pred cceeEEEEEccCcchhhccCCceEEEEEcCCC--CHHHHHHHhhhceeecCCCCccccccCCCCCCeecHhHHHHHhccc
Confidence 45789999998765 5799999998 89999999988766542211 12589999999999731
Q ss_pred ----chHHHHHHHHHHHHHHcCC--cEEEEeccChhHHHHHHHHHHhhhhcCC-cceEEEEecCCcccChhHHHHHhhcC
Q 023160 80 ----TIRPAIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVNLGI-QNVQVMTFGQPRIGNAAFASYYTQLV 152 (286)
Q Consensus 80 ----~~~~~~~~~l~~~~~~~~~--~~I~vTGHSLGGAlA~L~a~~l~~~~~~-~~v~~~TFG~PrvGn~~fa~~~~~~~ 152 (286)
.+++++++.|++++++||+ ++|+|||||||||||+|+|++++...+. ..+.+||||+|||||.+|++++++..
T Consensus 175 ~~~~s~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~~~~~~~ 254 (365)
T PLN02408 175 AMGPSLQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRRQLEKQG 254 (365)
T ss_pred ccchhHHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHHHHHhcC
Confidence 4789999999999999985 4699999999999999999999887543 35889999999999999999999987
Q ss_pred CCEEEEEECCCcccccCCCCCC---------------CC----------CCCeeecCeeEEEccCC
Q 023160 153 PNTFRVTNYHDIVPHLPPYYSY---------------FP----------QKTYHHFPREVWLYHIG 193 (286)
Q Consensus 153 ~~~~riv~~~DiVP~lP~~~~~---------------~~----------~~~y~H~g~ev~~~~~~ 193 (286)
.+.+||+|..|+||++|+.... +| .+.|.|+|.|+-++...
T Consensus 255 ~~~lRVvN~~D~VP~vP~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Y~hVG~el~ld~~~ 320 (365)
T PLN02408 255 TKVLRIVNSDDVITKVPGFVIDGENDVAKKRDVNVAGLPSWIQKRVEDTQWVYAEVGRELRLSSKD 320 (365)
T ss_pred CcEEEEEeCCCCcccCCCcccCccccccccccccccccchhhhhcccccCcceeecceeEEecCCC
Confidence 7899999999999999974211 00 25799999999997653
No 12
>PLN02719 triacylglycerol lipase
Probab=100.00 E-value=1e-37 Score=300.99 Aligned_cols=174 Identities=32% Similarity=0.487 Sum_probs=143.4
Q ss_pred CCccEEEEEECCCC---------eEEEEEcCCCCCChhHHHhhccccccccCCC--CC--CCceEehhhHHHhhh-----
Q 023160 17 GLTKGFLGVAKDLN---------AIVIAFRGTQEHSIQNWIEDLFWKQLDINYP--GM--SDAMVHHGFYSAYHN----- 78 (286)
Q Consensus 17 ~~~~gyV~~~~~~~---------~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p--~~--~~~~VH~GF~~~~~~----- 78 (286)
..+.||||++.+.+ .||||||||. ++.||++|+.+...+...+ .| ++++||+||+++|..
T Consensus 191 snw~GYVAVs~de~~~~~rlGRRdIVVAfRGT~--t~~eWi~DL~~~l~p~~~~~~~c~~~~~kVH~GFls~Yts~~~~s 268 (518)
T PLN02719 191 ANWIGYVAVSDDDEATRCRLGRRDIAIAWRGTV--TRLEWIADLKDFLKPVSGNGFRCPDPAVKAESGFLDLYTDKDTCC 268 (518)
T ss_pred CCceEEEEEcCCcccchhccCCceEEEEEcCCC--CchhhhhhccccceeccccccCCCCCCceeehhHHHHHhcccccc
Confidence 45889999998744 4999999998 8899999998754433211 22 358999999999963
Q ss_pred ----hchHHHHHHHHHHHHHHcCC-----cEEEEeccChhHHHHHHHHHHhhhhc-------CCcceEEEEecCCcccCh
Q 023160 79 ----TTIRPAIINAVERAKDFYGD-----LNIMVTGHSMGGAMAAFCGLDLTVNL-------GIQNVQVMTFGQPRIGNA 142 (286)
Q Consensus 79 ----~~~~~~~~~~l~~~~~~~~~-----~~I~vTGHSLGGAlA~L~a~~l~~~~-------~~~~v~~~TFG~PrvGn~ 142 (286)
.++++++++.|++++++||+ ++|+|||||||||||+|+|++++... ....|.+||||+|||||.
T Consensus 269 ~~~k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~ 348 (518)
T PLN02719 269 NFSKFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNI 348 (518)
T ss_pred cccchhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCH
Confidence 24789999999999999975 69999999999999999999997641 113478999999999999
Q ss_pred hHHHHHhhcCCCEEEEEECCCcccccCCCCCC-------------CCCCCeeecCeeEEEccCC
Q 023160 143 AFASYYTQLVPNTFRVTNYHDIVPHLPPYYSY-------------FPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 143 ~fa~~~~~~~~~~~riv~~~DiVP~lP~~~~~-------------~~~~~y~H~g~ev~~~~~~ 193 (286)
+|+++++++..+.+||+|..|+||+||+.+.. ++ +.|.|+|.|++|+...
T Consensus 349 ~Fa~~~~~~~~~~lRVvN~~D~VP~lP~~~~~~~~~~~l~~~~~~~~-~~Y~hVG~eL~ld~~~ 411 (518)
T PLN02719 349 RFKERIEELGVKVLRVVNEHDVVAKSPGLFLNERAPQALMKLAGGLP-WCYSHVGEMLPLDHQK 411 (518)
T ss_pred HHHHHHHhcCCcEEEEEeCCCCcccCCchhccccccchhhhcccCCc-cceeeeeEEEEEcCCC
Confidence 99999998877899999999999999985311 11 5799999999997653
No 13
>PLN03037 lipase class 3 family protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=300.29 Aligned_cols=173 Identities=31% Similarity=0.509 Sum_probs=144.9
Q ss_pred CccEEEEEECC-------CCeEEEEEcCCCCCChhHHHhhccccccccCCC---CCCCceEehhhHHHhhh---------
Q 023160 18 LTKGFLGVAKD-------LNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYP---GMSDAMVHHGFYSAYHN--------- 78 (286)
Q Consensus 18 ~~~gyV~~~~~-------~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p---~~~~~~VH~GF~~~~~~--------- 78 (286)
.+.||||++++ ++.||||||||. +..||++|+.+.+.+.... +..+++||+||+++|..
T Consensus 216 nw~GYVAVstDe~~~rlGRRdIVVAfRGT~--s~~EWl~DL~~~lvp~~~~~~~~~~~~kVH~GFlslYtS~~~~s~fnk 293 (525)
T PLN03037 216 NWMGFVAVSGDRESQRIGRRDIVVAWRGTV--APTEWFMDLRTSLEPFDCDGDHGKNVVKVQSGFLSIYKSKSELTRYNK 293 (525)
T ss_pred ceEEEEEEeCCccccccCCceEEEEECCCC--CHHHHHHhhhccccccccccCCCCCCceeeHhHHHHHhCccccccccc
Confidence 35799999988 568999999998 8899999998766654322 24578999999999973
Q ss_pred hchHHHHHHHHHHHHHHcC----CcEEEEeccChhHHHHHHHHHHhhhhcCCc-ceEEEEecCCcccChhHHHHHhhcCC
Q 023160 79 TTIRPAIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQ-NVQVMTFGQPRIGNAAFASYYTQLVP 153 (286)
Q Consensus 79 ~~~~~~~~~~l~~~~~~~~----~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~-~v~~~TFG~PrvGn~~fa~~~~~~~~ 153 (286)
.+.++++++.|+++.++|+ +++|+|||||||||||+|+|++++...+.. .+.+||||+|||||.+|+++++++..
T Consensus 294 ~SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~~~l~~ 373 (525)
T PLN03037 294 LSASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKLNELGV 373 (525)
T ss_pred chhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHHHhcCC
Confidence 2357889999999988775 579999999999999999999998765543 78999999999999999999999878
Q ss_pred CEEEEEECCCcccccCCCCCC-----------CCCCCeeecCeeEEEccC
Q 023160 154 NTFRVTNYHDIVPHLPPYYSY-----------FPQKTYHHFPREVWLYHI 192 (286)
Q Consensus 154 ~~~riv~~~DiVP~lP~~~~~-----------~~~~~y~H~g~ev~~~~~ 192 (286)
+.+||+|..|+||+|||.... ...+.|.|+|.|+-|+..
T Consensus 374 ~~lRVVN~~DiVP~lPp~~~~~~~~~~~~~~~~~~w~Y~hVG~eL~lD~~ 423 (525)
T PLN03037 374 KVLRVVNKQDIVPKLPGIIFNKILNKLNPITSRLNWVYRHVGTQLKLDMF 423 (525)
T ss_pred CEEEEEECCCccccCCchhhccchhhcccccccCCceeEecceeEEecCC
Confidence 899999999999999996311 012579999999998754
No 14
>PLN02753 triacylglycerol lipase
Probab=100.00 E-value=1.4e-37 Score=300.70 Aligned_cols=175 Identities=33% Similarity=0.486 Sum_probs=145.0
Q ss_pred CCccEEEEEECCC--------CeEEEEEcCCCCCChhHHHhhccccccccCCC--CC--CCceEehhhHHHhhh------
Q 023160 17 GLTKGFLGVAKDL--------NAIVIAFRGTQEHSIQNWIEDLFWKQLDINYP--GM--SDAMVHHGFYSAYHN------ 78 (286)
Q Consensus 17 ~~~~gyV~~~~~~--------~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p--~~--~~~~VH~GF~~~~~~------ 78 (286)
..+.||||++.+. +.||||||||. +..||++|+.+.+++...+ .+ .+++||+||+++|..
T Consensus 206 snw~GYVAVs~De~~~~rlGRRdIVVAfRGT~--s~~DWl~DL~~~l~p~~~~~~~~~~~~~kVH~GFl~lYts~d~~s~ 283 (531)
T PLN02753 206 ANWMGYVAVSDDETSRNRLGRRDIAIAWRGTV--TKLEWIADLKDYLKPVSENKIRCPDPAVKVESGFLDLYTDKDTTCK 283 (531)
T ss_pred CCeeEEEEEeCCcccccccCCceEEEEECCCC--CHHHHHHHhhccccccCcccCCCCCCCcchhHhHHHHHhccCcccc
Confidence 4578999999874 47999999998 7899999998766554432 12 358999999999973
Q ss_pred ---hchHHHHHHHHHHHHHHcC-----CcEEEEeccChhHHHHHHHHHHhhhhcC-------CcceEEEEecCCcccChh
Q 023160 79 ---TTIRPAIINAVERAKDFYG-----DLNIMVTGHSMGGAMAAFCGLDLTVNLG-------IQNVQVMTFGQPRIGNAA 143 (286)
Q Consensus 79 ---~~~~~~~~~~l~~~~~~~~-----~~~I~vTGHSLGGAlA~L~a~~l~~~~~-------~~~v~~~TFG~PrvGn~~ 143 (286)
.++++++++.|++++++|+ +++|+|||||||||||+|+|++++...- ...|.+||||+|||||.+
T Consensus 284 ~~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~a 363 (531)
T PLN02753 284 FAKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNVR 363 (531)
T ss_pred cchhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCHH
Confidence 2578999999999999885 5899999999999999999999976411 134789999999999999
Q ss_pred HHHHHhhcCCCEEEEEECCCcccccCCCCCC------------CCCCCeeecCeeEEEccCC
Q 023160 144 FASYYTQLVPNTFRVTNYHDIVPHLPPYYSY------------FPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 144 fa~~~~~~~~~~~riv~~~DiVP~lP~~~~~------------~~~~~y~H~g~ev~~~~~~ 193 (286)
|+++++++..+.+||+|..|+||+||+.+.. ...+.|.|+|.|++++...
T Consensus 364 FA~~~~~l~~~~lRVVN~~DiVP~lP~~~~~~~~~~~l~~~~~~~~~~Y~hVG~EL~lD~~~ 425 (531)
T PLN02753 364 FKDRMEELGVKVLRVVNVHDVVPKSPGLFLNESRPHALMKIAEGLPWCYSHVGEELALDHQN 425 (531)
T ss_pred HHHHHHhcCCCEEEEEeCCCCcccCCchhccccccchhhhhccCCccceeeeeeEEeeCCCC
Confidence 9999998877899999999999999985311 0015799999999997653
No 15
>PLN02162 triacylglycerol lipase
Probab=100.00 E-value=5e-36 Score=286.77 Aligned_cols=173 Identities=27% Similarity=0.376 Sum_probs=138.0
Q ss_pred CCccEEEEEEC--CCCeEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhhh---------------
Q 023160 17 GLTKGFLGVAK--DLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNT--------------- 79 (286)
Q Consensus 17 ~~~~gyV~~~~--~~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~--------------- 79 (286)
.+|++|++.|. +.+.||||||||.+.+..||++|+++...+ + +..++||.||+++|...
T Consensus 183 ~~TQafv~~d~~~d~~~IVVAFRGT~~~~~~DWiTDld~s~~~--~--~~~GkVH~GF~~A~~~~~~~~~p~~~~~~~~~ 258 (475)
T PLN02162 183 KLTQAFVFKTSSTNPDLIVVSFRGTEPFEAADWCTDLDLSWYE--L--KNVGKVHAGFSRALGLQKDGGWPKENISLLHQ 258 (475)
T ss_pred cccceEEEEeccCCCceEEEEEccCCCCcHHHHHhhcCcceec--C--CCCeeeeHHHHHHHHhhhcccccccccchhhh
Confidence 46889999874 569999999999976789999999876543 2 34699999999998511
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcC----CcceEEEEecCCcccChhHHHHHhhcC---
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLG----IQNVQVMTFGQPRIGNAAFASYYTQLV--- 152 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~----~~~v~~~TFG~PrvGn~~fa~~~~~~~--- 152 (286)
....++.+.|+++++++|+++|+|||||||||||+|+|..|+.... .....+||||+|||||++|++++++..
T Consensus 259 ~ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~~FA~~~~~~~~~~ 338 (475)
T PLN02162 259 YAYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDEDFGEFMKGVVKKH 338 (475)
T ss_pred hhHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCHHHHHHHHhhhhcC
Confidence 0123567778888889999999999999999999999988865321 123479999999999999999998753
Q ss_pred -CCEEEEEECCCcccccCCCCCCCCCCCeeecCeeEEEccCCCC
Q 023160 153 -PNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLG 195 (286)
Q Consensus 153 -~~~~riv~~~DiVP~lP~~~~~~~~~~y~H~g~ev~~~~~~~g 195 (286)
...+||+|.+|+||++|+.... .++|+|+|+.++++....|
T Consensus 339 ~~~~~RvVn~nDiVPrlP~~~~~--~~gY~H~G~c~y~~s~y~~ 380 (475)
T PLN02162 339 GIEYERFVYNNDVVPRVPFDDKL--LFSYKHYGPCNSFNSLYKG 380 (475)
T ss_pred CCceEEEEeCCCcccccCCCCcc--cceeEECCccceeecccCC
Confidence 3468999999999999986321 2589999999988764433
No 16
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=100.00 E-value=1.8e-32 Score=224.73 Aligned_cols=136 Identities=40% Similarity=0.682 Sum_probs=115.7
Q ss_pred EEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhhhchHHHHHHHHHHHHHHcCCcEEEEeccChhHHH
Q 023160 33 VIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAM 112 (286)
Q Consensus 33 vVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAl 112 (286)
||+||||. +..||++|+.............+++||+||++++. ..+.+++.+.|+++.+++++++|++||||||||+
T Consensus 1 vva~RGT~--s~~d~~~d~~~~~~~~~~~~~~~~~vh~g~~~~~~-~~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGal 77 (140)
T PF01764_consen 1 VVAFRGTN--SPSDWLTDLDAWPVSWSSFLLDGGRVHSGFLDAAE-DSLYDQILDALKELVEKYPDYSIVITGHSLGGAL 77 (140)
T ss_dssp EEEEEESS--SHHHHHHHTHHCEEECTTSTTCTHEEEHHHHHHHH-CHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHH
T ss_pred eEEEECCC--CHHHHHHhcccCceeccccccCceEEehhHHHHHH-HHHHHHHHHHHHHHHhcccCccchhhccchHHHH
Confidence 79999998 89999999987666544322237999999999997 2467899999999999999999999999999999
Q ss_pred HHHHHHHhhhhcCC--cceEEEEecCCcccChhHHHHHhhcCCC-EEEEEECCCcccccCCC
Q 023160 113 AAFCGLDLTVNLGI--QNVQVMTFGQPRIGNAAFASYYTQLVPN-TFRVTNYHDIVPHLPPY 171 (286)
Q Consensus 113 A~L~a~~l~~~~~~--~~v~~~TFG~PrvGn~~fa~~~~~~~~~-~~riv~~~DiVP~lP~~ 171 (286)
|.++++++...... .++++++||+||+||..|++++++.... .+||+|.+|+||+||+.
T Consensus 78 A~l~a~~l~~~~~~~~~~~~~~~fg~P~~~~~~~~~~~~~~~~~~~~~iv~~~D~Vp~~p~~ 139 (140)
T PF01764_consen 78 ASLAAADLASHGPSSSSNVKCYTFGAPRVGNSAFAKWYDSLFNRNIFRIVNQNDIVPRLPPC 139 (140)
T ss_dssp HHHHHHHHHHCTTTSTTTEEEEEES-S--BEHHHHHHHHHHTSCGEEEEEETTBSGGGTS-G
T ss_pred HHHHHHhhhhcccccccceeeeecCCccccCHHHHHHHHhhCCCeEEEEEECCCEeeecCCC
Confidence 99999999876543 7899999999999999999999987765 99999999999999974
No 17
>PLN02847 triacylglycerol lipase
Probab=99.95 E-value=1.6e-27 Score=233.09 Aligned_cols=145 Identities=21% Similarity=0.233 Sum_probs=123.8
Q ss_pred cEEEEEECCCCeEEEEEcCCCCCChhHHHhhccccccccCC-----CCC---CCceEehhhHHHhhhhchHHHHHHHHHH
Q 023160 20 KGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINY-----PGM---SDAMVHHGFYSAYHNTTIRPAIINAVER 91 (286)
Q Consensus 20 ~gyV~~~~~~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~-----p~~---~~~~VH~GF~~~~~~~~~~~~~~~~l~~ 91 (286)
.-||++|++++.|||+||||. |+.||++|+....+++.. .+. ..+.+|+||+.+++ .+.+.+...|++
T Consensus 168 affVavDh~~K~IVVsIRGT~--Si~D~LTDL~~~~vPf~~s~l~~gG~~n~~~G~AH~Gml~AAr--wI~~~i~~~L~k 243 (633)
T PLN02847 168 AFTIIRDENSKCFLLLIRGTH--SIKDTLTAATGAVVPFHHSVLHDGGVSNLVLGYAHCGMVAAAR--WIAKLSTPCLLK 243 (633)
T ss_pred CeEEEEeCCCCEEEEEECCCC--CHHHHHHhcccccccCCcccccccCcccCcCCccCccHHHHHH--HHHHHHHHHHHH
Confidence 356899999999999999998 999999999866554321 111 24689999999997 577788888889
Q ss_pred HHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHhhcCCCEEEEEECCCcccccCCC
Q 023160 92 AKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVPHLPPY 171 (286)
Q Consensus 92 ~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~~~~~~~~riv~~~DiVP~lP~~ 171 (286)
+++++|+|+|+|||||||||+|+|+++.|.......++.||+||+|.+.+..++.+...+ ..+|||++|+||||++.
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~CyAFgPp~cvS~eLAe~~k~f---VTSVVng~DIVPRLS~~ 320 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYILREQKEFSSTTCVTFAPAACMTWDLAESGKHF---ITTIINGSDLVPTFSAA 320 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHHHhcCCCCCCceEEEecCchhcCHHHHHHhhhh---eEEEEeCCCCCccCCHH
Confidence 999999999999999999999999999987655567889999999999999999887654 47999999999999975
No 18
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.95 E-value=8.4e-27 Score=195.10 Aligned_cols=151 Identities=36% Similarity=0.469 Sum_probs=122.0
Q ss_pred hhhHHHhhhhchHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHH--H
Q 023160 70 HGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFAS--Y 147 (286)
Q Consensus 70 ~GF~~~~~~~~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~--~ 147 (286)
+||+.++. .+...+.+.+++.+.++|+++|++||||||||||.++++++....+...+.++|||+||+|+..|+. .
T Consensus 1 ~Gf~~~~~--~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~ 78 (153)
T cd00741 1 KGFYKAAR--SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRL 78 (153)
T ss_pred CchHHHHH--HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhh
Confidence 48999998 6788888999988888999999999999999999999999877545567899999999999999984 5
Q ss_pred HhhcCCCEEEEEECCCcccccCCCCCCCCCCCeeecCeeEEEccCCCCccccceeeecCCCCCCCCCcCCCCCCcccCcc
Q 023160 148 YTQLVPNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCSRSVTGNSVSDHL 227 (286)
Q Consensus 148 ~~~~~~~~~riv~~~DiVP~lP~~~~~~~~~~y~H~g~ev~~~~~~~g~~~y~~~~~C~~~~ed~~Cs~~~~~~si~dH~ 227 (286)
.+......+||++.+|+||++|+. .++|.|.+.|+|++......... ..|....++..|........+.||.
T Consensus 79 ~~~~~~~~~~i~~~~D~v~~~p~~-----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dH~ 150 (153)
T cd00741 79 DPSDALFVDRIVNDNDIVPRLPPG-----GEGYPHGGAEFYINGGKSQPGCC---KNVLEAVDIDFGNIGLSGNGLCDHL 150 (153)
T ss_pred hccCCccEEEEEECCCccCCCCCC-----cCCCeecceEEEECCCCCCCccc---ccceeeccccccccCcCCcCHHHhh
Confidence 455556789999999999999986 36899999999998765221111 1221113567787776678899999
Q ss_pred ccc
Q 023160 228 VYF 230 (286)
Q Consensus 228 ~Yf 230 (286)
.||
T Consensus 151 ~y~ 153 (153)
T cd00741 151 RYF 153 (153)
T ss_pred ccC
Confidence 886
No 19
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=99.58 E-value=1.1e-14 Score=129.94 Aligned_cols=128 Identities=23% Similarity=0.342 Sum_probs=91.3
Q ss_pred cEEE--EEECCCCeEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhhhchHHHHHHHHHHHHHHcC
Q 023160 20 KGFL--GVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYG 97 (286)
Q Consensus 20 ~gyV--~~~~~~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~~ 97 (286)
.+|. .+..+.+.++||||||+. ++.||.+|+...... .. .......+.+++++++++
T Consensus 25 ~qF~A~~f~~~~~~~~vaFRGTd~-t~~~W~ed~~~~~~~-~~-------------------~~q~~A~~yl~~~~~~~~ 83 (224)
T PF11187_consen 25 KQFSAVTFRLPDGEYVVAFRGTDD-TLVDWKEDFNMSFQD-ET-------------------PQQKSALAYLKKIAKKYP 83 (224)
T ss_pred cCcEEEEEEeCCCeEEEEEECCCC-chhhHHHHHHhhcCC-CC-------------------HHHHHHHHHHHHHHHhCC
Confidence 3553 334447789999999974 799999998642210 00 112345667777788887
Q ss_pred CcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHH-HHHhhcCCCEEEEEECCCcccccC
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFA-SYYTQLVPNTFRVTNYHDIVPHLP 169 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa-~~~~~~~~~~~riv~~~DiVP~lP 169 (286)
+. |++|||||||.||+.+++.+.......-.++|+|-+|.....-.. ..++....++.+++...|+|..|-
T Consensus 84 ~~-i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~~~~~~~~~~~~~~kI~~~vp~~siVg~ll 155 (224)
T PF11187_consen 84 GK-IYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSEEFLESPGYQRIKDKIHNYVPQSSIVGMLL 155 (224)
T ss_pred CC-EEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCChhhcccHhHHHHhhhhEEEcCCcceecccc
Confidence 74 999999999999999999876554434458999999998654433 233344456788999999998874
No 20
>COG3675 Predicted lipase [Lipid metabolism]
Probab=99.23 E-value=1.1e-12 Score=118.73 Aligned_cols=161 Identities=22% Similarity=0.316 Sum_probs=114.5
Q ss_pred cEEEEEECCCCeEEEEEcCCCCCChhHHHhhcccccccc---------------CCCCCCCceEehhhHHHhhhhchHHH
Q 023160 20 KGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDI---------------NYPGMSDAMVHHGFYSAYHNTTIRPA 84 (286)
Q Consensus 20 ~gyV~~~~~~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~---------------~~p~~~~~~VH~GF~~~~~~~~~~~~ 84 (286)
++++++++-.+.++++|||+. +.+||+.|++..+.+. .+..+.++..|+++.+.=. ++...
T Consensus 83 S~~~a~~rls~~vi~vf~gs~--~Rqdw~~~fd~de~n~~~l~~g~lay~ie~g~~~~ldn~gm~~~~sr~~d--tlgmt 158 (332)
T COG3675 83 SIRVAWSRLSDEVIVVFKGSH--SRQDWLLNFDVDERNCRHLCVGELAYRIEAGFYHLLDNEGMHRQPSRNQD--TLGMT 158 (332)
T ss_pred hhhhHHhhcCCcEEEEEeccc--cccccchhcccchhhhhHHHHHHHHHHhhccceeeccccccccchhhhhh--hcCch
Confidence 477889999999999999987 7899999887543321 1222456668888876644 33444
Q ss_pred HHH-HHHHHHHHcCC-cEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHhhcC-CCEEEEEEC
Q 023160 85 IIN-AVERAKDFYGD-LNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLV-PNTFRVTNY 161 (286)
Q Consensus 85 ~~~-~l~~~~~~~~~-~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~~~~-~~~~riv~~ 161 (286)
+.+ ..+.++++.|. |++.+||||.||||+.+.+.++..+++..+-.++|||+|.++|-.+++|+.+.+ .+.+|+.-.
T Consensus 159 v~~~q~~~lleeiP~~Yrig~tghS~g~aii~vrGtyfe~k~p~vdnlv~tf~~P~itd~r~~QyVh~gF~~~t~ri~S~ 238 (332)
T COG3675 159 VIEKQEQTLLEEIPQGYRIGITGHSSGGAIICVRGTYFERKYPRVDNLVVTFGQPAITDWRFPQYVHEGFAHKTYRICSD 238 (332)
T ss_pred HHHHHHHHHHHhcccceEEEEEeecCCccEEEEeccchhcccCCcccceeeccCCccccchhHHHHHhHHHHHHHHHhcc
Confidence 443 55667788886 999999999999999999997777776666678899999999999999976433 344555555
Q ss_pred CCcccccCCCCCCCCCCCeeecCeeEEE
Q 023160 162 HDIVPHLPPYYSYFPQKTYHHFPREVWL 189 (286)
Q Consensus 162 ~DiVP~lP~~~~~~~~~~y~H~g~ev~~ 189 (286)
-|..-.+|+.. .-|.|.+.-.|.
T Consensus 239 l~~ei~~~k~p-----f~ycHsgg~~~a 261 (332)
T COG3675 239 LDIEIFMPKVP-----FLYCHSGGLLWA 261 (332)
T ss_pred chHhhcCcCCc-----eEEEecCCcccc
Confidence 55555555432 235555555554
No 21
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=99.01 E-value=7.3e-10 Score=100.81 Aligned_cols=48 Identities=33% Similarity=0.684 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCc
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPR 138 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Pr 138 (286)
..++.+..+++.||+.+||+||||||||+|+|++..+ .+.+++|-+|.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f-------glP~VaFesPG 308 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF-------GLPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc-------CCceEEecCch
Confidence 4556667778899999999999999999999999764 45689999994
No 22
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=99.01 E-value=7.3e-10 Score=100.81 Aligned_cols=48 Identities=33% Similarity=0.684 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCc
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPR 138 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Pr 138 (286)
..++.+..+++.||+.+||+||||||||+|+|++..+ .+.+++|-+|.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f-------glP~VaFesPG 308 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF-------GLPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc-------CCceEEecCch
Confidence 4556667778899999999999999999999999764 45689999994
No 23
>COG3675 Predicted lipase [Lipid metabolism]
Probab=98.72 E-value=5.1e-09 Score=95.25 Aligned_cols=135 Identities=20% Similarity=0.170 Sum_probs=88.0
Q ss_pred ECCCCeEEEEEcCCCCCChhHHHhhccccc-cccCCCCCCCceEehhhHHHhhhhchHHHHHHHHHHHHHHcCCcEEEEe
Q 023160 26 AKDLNAIVIAFRGTQEHSIQNWIEDLFWKQ-LDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVT 104 (286)
Q Consensus 26 ~~~~~~ivVafRGT~~~s~~dwl~Dl~~~~-~~~~~p~~~~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~~~~~I~vT 104 (286)
=++...-++++|||.-.+-..|..++.+.. .|.-..-...-.||+||..-+. .+...++......+.+.+++
T Consensus 181 ghS~g~aii~vrGtyfe~k~p~vdnlv~tf~~P~itd~r~~QyVh~gF~~~t~------ri~S~l~~ei~~~k~pf~yc- 253 (332)
T COG3675 181 GHSSGGAIICVRGTYFERKYPRVDNLVVTFGQPAITDWRFPQYVHEGFAHKTY------RICSDLDIEIFMPKVPFLYC- 253 (332)
T ss_pred eecCCccEEEEeccchhcccCCcccceeeccCCccccchhHHHHHhHHHHHHH------HHhccchHhhcCcCCceEEE-
Confidence 345566799999992115567777765321 1110000112348999998765 23333333344445666666
Q ss_pred ccChhHHHHHHHHHHhhhhcC--CcceEEEEecCCcccChhHHHHHhhcCCCEEEEEECCCcccccCCCCCCCCCCCeee
Q 023160 105 GHSMGGAMAAFCGLDLTVNLG--IQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSYFPQKTYHH 182 (286)
Q Consensus 105 GHSLGGAlA~L~a~~l~~~~~--~~~v~~~TFG~PrvGn~~fa~~~~~~~~~~~riv~~~DiVP~lP~~~~~~~~~~y~H 182 (286)
||+|++.|.+.- .+. +..++++++ ||||...|+++. ..+|++|.+|.+|.+|... ..++.|
T Consensus 254 -Hsgg~~~avl~~-----~yhn~p~~lrLy~y--prVGl~~fae~i-----l~YR~vNn~d~~p~~pt~g----m~t~VH 316 (332)
T COG3675 254 -HSGGLLWAVLGR-----IYHNTPTWLRLYRY--PRVGLIRFAEYI-----LMYRYVNNKDFFPERPTEG----MSTLVH 316 (332)
T ss_pred -ecCCcccccccc-----cccCCchhheeecc--ccccccchHHHH-----HHHhhcchhhhcccccccc----ccceeE
Confidence 999999998872 222 356788888 999999999993 3479999999999999653 246888
Q ss_pred cC
Q 023160 183 FP 184 (286)
Q Consensus 183 ~g 184 (286)
+.
T Consensus 317 V~ 318 (332)
T COG3675 317 VY 318 (332)
T ss_pred EE
Confidence 64
No 24
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.73 E-value=0.00016 Score=62.34 Aligned_cols=58 Identities=19% Similarity=0.261 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH--hhhhcCCcceEEEEecCCcc
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD--LTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~--l~~~~~~~~v~~~TFG~Prv 139 (286)
...+.+.|++..++.|+.+|+++|+|+||.++.-+... +..........++.||-|+-
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 34566677777788999999999999999999877666 32222223457899999986
No 25
>KOG2088 consensus Predicted lipase/calmodulin-binding heat-shock protein [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=97.54 E-value=2.7e-05 Score=78.58 Aligned_cols=139 Identities=19% Similarity=0.202 Sum_probs=89.7
Q ss_pred EE-EEEECCCCeEEEEEcC-CCCCChhHHHhhccccc----cccCCC--CCCCceEehhhHHHhhhhchHHHHHHHHH-H
Q 023160 21 GF-LGVAKDLNAIVIAFRG-TQEHSIQNWIEDLFWKQ----LDINYP--GMSDAMVHHGFYSAYHNTTIRPAIINAVE-R 91 (286)
Q Consensus 21 gy-V~~~~~~~~ivVafRG-T~~~s~~dwl~Dl~~~~----~~~~~p--~~~~~~VH~GF~~~~~~~~~~~~~~~~l~-~ 91 (286)
+| +..|+....|+.+.|| +. ++.+-.+|+.-.. +.-+++ ......+|.|..++.. .+..+-...+. +
T Consensus 169 ~~~i~~dh~~~~v~~~ir~~~~--s~~e~~~~~~~~~~~~~~~~~~~~~~f~~~~~h~g~~~~a~--~~~~~~~~~~~~r 244 (596)
T KOG2088|consen 169 YYVIGGDHVRLEVVLAIRGALN--SAYESDTDVTEAVAHASVLNDFGERKFDGGYVHNGLLKAAA--WILAEETATLRSR 244 (596)
T ss_pred ceEEecCcchHHHHHHHHhhhc--chhhhccccccchhhhhhhccchhhccccccccCcccchHH--HHhhccchhhhhh
Confidence 44 4668888999999999 65 7778777764110 111111 1246789999976654 33333344444 6
Q ss_pred HHHHcCCcEEEEeccChhHHHHHHHHHHhhhhc------CCcceEEEEecCCcccChhHHHHHhhcCCCEEEEEECCCcc
Q 023160 92 AKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNL------GIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIV 165 (286)
Q Consensus 92 ~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~------~~~~v~~~TFG~PrvGn~~fa~~~~~~~~~~~riv~~~DiV 165 (286)
..+.+|.+++.++||||||..|.+.+..+..+. ......+++|+.||......++-....+ .-++++.|.+
T Consensus 245 ~~~~~p~~~~~~~ghslg~~~~~l~~~~~l~~~~~l~~~~~~~~~~f~~a~~rc~~~~~~Et~~~vi---~d~~~~s~~~ 321 (596)
T KOG2088|consen 245 LWRLYPSYKLTGVGHSLGGLSASLLANCVLRNPAELLLIDKARNFCFVLAPPRCFSLRVAETPFDVI---TDYVKQSDVL 321 (596)
T ss_pred hhhhcCCCceeEEecccccchhhhhhHHHhcCHHHHhhccccceEEEEeccccccchhhccCHHHHH---Hhccccceee
Confidence 677899999999999999999999987554331 2345789999999963333332222221 2456667777
Q ss_pred c
Q 023160 166 P 166 (286)
Q Consensus 166 P 166 (286)
|
T Consensus 322 ~ 322 (596)
T KOG2088|consen 322 P 322 (596)
T ss_pred e
Confidence 7
No 26
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.22 E-value=0.00086 Score=59.92 Aligned_cols=58 Identities=22% Similarity=0.300 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHc-----CCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccCh
Q 023160 84 AIINAVERAKDFY-----GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNA 142 (286)
Q Consensus 84 ~~~~~l~~~~~~~-----~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~ 142 (286)
-+.+.++.+++.+ +..+|++.||||||-+|..+.... ...+...-.++|+|+|-.|..
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~-~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLP-NYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhcc-ccccccEEEEEEEcCCCCCcc
Confidence 3445555555555 688999999999998888776532 222222347999999998766
No 27
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.08 E-value=0.001 Score=58.99 Aligned_cols=61 Identities=20% Similarity=0.275 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHcCC--cEEEEeccChhHHHHHHHHHHhhhhcC--C------cceEEEEecCCcccCh
Q 023160 82 RPAIINAVERAKDFYGD--LNIMVTGHSMGGAMAAFCGLDLTVNLG--I------QNVQVMTFGQPRIGNA 142 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~--~~I~vTGHSLGGAlA~L~a~~l~~~~~--~------~~v~~~TFG~PrvGn~ 142 (286)
.+.+.+.|.+..+..+. .+|++.||||||-++-.|-..+..... . ..+..+|||.|=.|-.
T Consensus 59 g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~ 129 (217)
T PF05057_consen 59 GERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSR 129 (217)
T ss_pred HHHHHHHHHHhccccccccccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCc
Confidence 34556666666555554 489999999999998877666654321 1 2235678899998754
No 28
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.03 E-value=0.0029 Score=54.61 Aligned_cols=84 Identities=18% Similarity=0.307 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHc-CCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHhhcCCCEEEEEE
Q 023160 82 RPAIINAVERAKDFY-GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTN 160 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~-~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~~~~~~~~riv~ 160 (286)
...+...+..+...+ |+.++.+.|||.|..++.+++... +..-=.++.||+|.+|-..-.++ .-.-...|....
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~----~~~vddvv~~GSPG~g~~~a~~l-~~~~~~v~a~~a 165 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQG----GLRVDDVVLVGSPGMGVDSASDL-GVPPGHVYAMTA 165 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhC----CCCcccEEEECCCCCCCCCHHHc-CCCCCcEEEeeC
Confidence 345666666666666 789999999999999998887651 11222578999999986654432 222246788889
Q ss_pred CCCcccccCC
Q 023160 161 YHDIVPHLPP 170 (286)
Q Consensus 161 ~~DiVP~lP~ 170 (286)
.+|+|..+|.
T Consensus 166 ~~D~I~~v~~ 175 (177)
T PF06259_consen 166 PGDPIAYVPR 175 (177)
T ss_pred CCCCcccCCC
Confidence 9999999984
No 29
>PHA02857 monoglyceride lipase; Provisional
Probab=96.96 E-value=0.0054 Score=55.05 Aligned_cols=52 Identities=19% Similarity=0.364 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
+.+.+.+..+++.++..++.+.||||||++|..++... + ..++.+.+-+|.+
T Consensus 81 ~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~----p-~~i~~lil~~p~~ 132 (276)
T PHA02857 81 RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKN----P-NLFTAMILMSPLV 132 (276)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhC----c-cccceEEEecccc
Confidence 45566666555566777899999999999998887642 2 2344444445543
No 30
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.88 E-value=0.0029 Score=58.81 Aligned_cols=67 Identities=19% Similarity=0.324 Sum_probs=49.7
Q ss_pred ehhhHHHhhhhchHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccCh
Q 023160 69 HHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNA 142 (286)
Q Consensus 69 H~GF~~~~~~~~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~ 142 (286)
.+|-...|. .+.+.+...++.+...+++.++++.||||||.+|..++.... ..+..+..-+|..+-.
T Consensus 79 ~rg~~~~f~--~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~-----~~i~~~vLssP~~~l~ 145 (298)
T COG2267 79 QRGHVDSFA--DYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP-----PRIDGLVLSSPALGLG 145 (298)
T ss_pred CcCCchhHH--HHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC-----ccccEEEEECccccCC
Confidence 455555554 344566666666666688999999999999999999887653 4677788888888655
No 31
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.76 E-value=0.0035 Score=57.59 Aligned_cols=77 Identities=17% Similarity=0.202 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHH--cCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceE-EEEe--cCCcccChhHHHHHhhcCCCEE
Q 023160 82 RPAIINAVERAKDF--YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTF--GQPRIGNAAFASYYTQLVPNTF 156 (286)
Q Consensus 82 ~~~~~~~l~~~~~~--~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~-~~TF--G~PrvGn~~fa~~~~~~~~~~~ 156 (286)
.+.+.+.|+.+.+. .+..+|.+.||||||.+|.+++..+.. ++. ++.. +.|..-+......++..-...+
T Consensus 93 ~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~-----~v~~iv~LDPa~p~f~~~~~~~rl~~~dA~~V 167 (275)
T cd00707 93 GAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNG-----KLGRITGLDPAGPLFSGADPEDRLDPSDAQFV 167 (275)
T ss_pred HHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcC-----ccceeEEecCCcccccCCCcccccCCCCCCeE
Confidence 34555566665554 234689999999999999999876532 332 3333 2333333223333333334566
Q ss_pred EEEECCC
Q 023160 157 RVTNYHD 163 (286)
Q Consensus 157 riv~~~D 163 (286)
-++|.+-
T Consensus 168 ~vihT~~ 174 (275)
T cd00707 168 DVIHTDG 174 (275)
T ss_pred EEEEeCC
Confidence 7777654
No 32
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.61 E-value=0.0041 Score=61.00 Aligned_cols=62 Identities=16% Similarity=0.171 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhH
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAF 144 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~f 144 (286)
..+.+.|+++.+.++..++.+.||||||.+|...+...........-++++.|+|--|....
T Consensus 146 ~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs~~~ 207 (440)
T PLN02733 146 DGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGAPGF 207 (440)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCCchh
Confidence 45666677777778888999999999999998766442221111122688999998887644
No 33
>PRK10749 lysophospholipase L2; Provisional
Probab=96.52 E-value=0.0042 Score=58.02 Aligned_cols=54 Identities=15% Similarity=0.092 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCccc
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIG 140 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvG 140 (286)
.+.+...++.+.+.++..++++.||||||.+|..++... + ..++.+.+-+|..+
T Consensus 114 ~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~----p-~~v~~lvl~~p~~~ 167 (330)
T PRK10749 114 VDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRH----P-GVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhC----C-CCcceEEEECchhc
Confidence 445555555555555677899999999999998877642 2 23444445566543
No 34
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=96.52 E-value=0.0069 Score=55.25 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCCccc
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRIG 140 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~PrvG 140 (286)
..+...|..+.++|.-.++-++||||||-.+.............+.+ ++++.|+|==|
T Consensus 87 ~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 34556667778889888999999999998887665554443333344 89999999654
No 35
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=96.33 E-value=0.0043 Score=58.30 Aligned_cols=26 Identities=31% Similarity=0.238 Sum_probs=21.7
Q ss_pred HcC-CcEEEEeccChhHHHHHHHHHHh
Q 023160 95 FYG-DLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 95 ~~~-~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.+| +.++++.||||||++|...+..+
T Consensus 137 ~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 137 TKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred cccCCCceeEeeccCccHHHHHHHHHh
Confidence 466 78899999999999998877554
No 36
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.32 E-value=0.0031 Score=58.02 Aligned_cols=39 Identities=26% Similarity=0.356 Sum_probs=26.9
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
++.+.+...++++-.+. .-+|+++|||||||+|...|..
T Consensus 128 T~~KD~~~~i~~~fge~-~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 128 TMSKDFGAVIKELFGEL-PPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred HHHHHHHHHHHHHhccC-CCceEEEeccccchhhhhhhhh
Confidence 34556666666554332 3469999999999999876653
No 37
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.32 E-value=0.014 Score=52.70 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=62.7
Q ss_pred CeEEEEEcCCCCCChhHHHhhcc--ccccccCCCCCCCceEehhhHHHhhhhchHHHHHHHHHHHHH-HcCCcEEEEecc
Q 023160 30 NAIVIAFRGTQEHSIQNWIEDLF--WKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKD-FYGDLNIMVTGH 106 (286)
Q Consensus 30 ~~ivVafRGT~~~s~~dwl~Dl~--~~~~~~~~p~~~~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~-~~~~~~I~vTGH 106 (286)
+-+..=+-|-....+.-|...+. ++...+.+||.. .+.+..+..... .+.+.|...+. -+++..+.+-||
T Consensus 9 ~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~-~r~~ep~~~di~------~Lad~la~el~~~~~d~P~alfGH 81 (244)
T COG3208 9 RLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRG-DRFGEPLLTDIE------SLADELANELLPPLLDAPFALFGH 81 (244)
T ss_pred eEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcc-cccCCcccccHH------HHHHHHHHHhccccCCCCeeeccc
Confidence 33444555655445677877653 344556788743 344455554433 33344444444 466888999999
Q ss_pred ChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 107 SMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 107 SLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
||||.+|--.|..+...... ...++.-|++..
T Consensus 82 SmGa~lAfEvArrl~~~g~~-p~~lfisg~~aP 113 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLP-PRALFISGCRAP 113 (244)
T ss_pred chhHHHHHHHHHHHHHcCCC-cceEEEecCCCC
Confidence 99999999999888765433 445566665444
No 38
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.26 E-value=0.011 Score=50.55 Aligned_cols=50 Identities=24% Similarity=0.382 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCC
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQP 137 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~P 137 (286)
..+.+.+..+++..+..++.+.|||+||.+|...+.... . .| +++..++|
T Consensus 28 ~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p----~-~v~~lvl~~~~ 78 (230)
T PF00561_consen 28 DDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYP----E-RVKKLVLISPP 78 (230)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSG----G-GEEEEEEESES
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCc----h-hhcCcEEEeee
Confidence 456666677777778777999999999999988876542 2 45 45555665
No 39
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=96.25 E-value=0.011 Score=51.53 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
...+.+.++++..+..++++.||||||.+|..+|...
T Consensus 51 ~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 51 DVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhC
Confidence 3344445555555667999999999999999988764
No 40
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=96.05 E-value=0.018 Score=55.77 Aligned_cols=55 Identities=15% Similarity=0.205 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
...+...++.+..+++..++++.||||||.+|..++.+ ... ...+..+...+|..
T Consensus 191 ~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~--p~~-~~~v~glVL~sP~l 245 (395)
T PLN02652 191 VEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASY--PSI-EDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhc--cCc-ccccceEEEECccc
Confidence 45566667777667777889999999999999876532 110 12455566667754
No 41
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=96.00 E-value=0.019 Score=53.19 Aligned_cols=38 Identities=24% Similarity=0.350 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHH--cCCcEEEEeccChhHHHHHHHHHH
Q 023160 82 RPAIINAVERAKDF--YGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 82 ~~~~~~~l~~~~~~--~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
.+.+...++.+... +++.++++.||||||++|..++..
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~ 154 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLA 154 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhc
Confidence 34555555555432 345679999999999999887754
No 42
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.97 E-value=0.023 Score=49.52 Aligned_cols=58 Identities=17% Similarity=0.177 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
+.+-+...++.+++..|+-++++.|||+||.||.-.|..|... +...-.++.+.+|..
T Consensus 48 i~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 48 IEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESCSST
T ss_pred HHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecCCCC
Confidence 3444444555566666766999999999999999999888765 322336777775533
No 43
>PRK10985 putative hydrolase; Provisional
Probab=95.94 E-value=0.016 Score=53.95 Aligned_cols=53 Identities=15% Similarity=0.053 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCc-ceEEEEecCCc
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQ-NVQVMTFGQPR 138 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~-~v~~~TFG~Pr 138 (286)
.++...++.++++++..++++.||||||.++...+..... .. -..+++.++|-
T Consensus 115 ~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~---~~~~~~~v~i~~p~ 168 (324)
T PRK10985 115 EDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGD---DLPLDAAVIVSAPL 168 (324)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCC---CCCccEEEEEcCCC
Confidence 4555666666677787889999999999987665544221 11 23678888884
No 44
>PLN02511 hydrolase
Probab=95.93 E-value=0.037 Score=53.17 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCC
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQP 137 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~P 137 (286)
..+.+.+.++.+..++|+.++++.||||||.++...+.+..... .-..++...+|
T Consensus 155 ~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~--~v~~~v~is~p 209 (388)
T PLN02511 155 FTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENC--PLSGAVSLCNP 209 (388)
T ss_pred chHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCC--CceEEEEECCC
Confidence 34577777777888889889999999999999877665532210 12345556555
No 45
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=95.93 E-value=0.13 Score=46.24 Aligned_cols=139 Identities=16% Similarity=0.177 Sum_probs=84.7
Q ss_pred CCCeEEEEEcCCCCCChhHHHh-------hccccc--cccCCCCCCCceEehhhHHHhhhh-chHHHHHHHHHHHHHHcC
Q 023160 28 DLNAIVIAFRGTQEHSIQNWIE-------DLFWKQ--LDINYPGMSDAMVHHGFYSAYHNT-TIRPAIINAVERAKDFYG 97 (286)
Q Consensus 28 ~~~~ivVafRGT~~~s~~dwl~-------Dl~~~~--~~~~~p~~~~~~VH~GF~~~~~~~-~~~~~~~~~l~~~~~~~~ 97 (286)
+.++++|=.=|=+. ++.+.+. ++.+.. +-+.||.. +.+ .+|...-... .-.+.+.+.|+.+.+..+
T Consensus 16 ~~~~vlvfVHGyn~-~f~~a~~r~aql~~~~~~~~~~i~FsWPS~--g~~-~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~ 91 (233)
T PF05990_consen 16 PDKEVLVFVHGYNN-SFEDALRRAAQLAHDLGFPGVVILFSWPSD--GSL-LGYFYDRESARFSGPALARFLRDLARAPG 91 (233)
T ss_pred CCCeEEEEEeCCCC-CHHHHHHHHHHHHHHhCCCceEEEEEcCCC--CCh-hhhhhhhhhHHHHHHHHHHHHHHHHhccC
Confidence 46778888888773 5666544 333322 22345643 222 2232221110 123455566666655557
Q ss_pred CcEEEEeccChhHHHHHHHHHHhhhhcC----CcceEEEEecCCcccChhHHHHHhhcC---CCEEEEEECCCcccccCC
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLTVNLG----IQNVQVMTFGQPRIGNAAFASYYTQLV---PNTFRVTNYHDIVPHLPP 170 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~~~~~----~~~v~~~TFG~PrvGn~~fa~~~~~~~---~~~~riv~~~DiVP~lP~ 170 (286)
..+|.+.+||||+-+..-+-..+..... ...+.-+.+.+|-+-...|......+. .+++-+.+.+|.+=.+..
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~~D~AL~~S~ 171 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSRNDRALKASR 171 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcCCchHHHHHH
Confidence 8899999999999876655555444322 135667788999999999998876543 456667788888766554
No 46
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=95.92 E-value=0.026 Score=56.75 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCCc
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPR 138 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~Pr 138 (286)
.+.+.++|..+++..+..++.++||||||.+++++...++.......+ .++.|++|-
T Consensus 245 ~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~ 302 (532)
T TIGR01838 245 RDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLL 302 (532)
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCc
Confidence 355677777777767788999999999999876644433333222344 456667663
No 47
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=95.81 E-value=0.014 Score=49.88 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 85 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 85 ~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
+.+.+.++.+..+..++.+.||||||.+|..+|..
T Consensus 65 ~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 65 LADDVLALLDHLGIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHH
Confidence 33444444554455679999999999999987765
No 48
>PRK13604 luxD acyl transferase; Provisional
Probab=95.77 E-value=0.014 Score=54.57 Aligned_cols=51 Identities=10% Similarity=0.096 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCccc
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIG 140 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvG 140 (286)
..++..++..++++ ...+|.+.||||||++|.++|.+ .++..+...+|-..
T Consensus 92 ~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~-------~~v~~lI~~sp~~~ 142 (307)
T PRK13604 92 KNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINE-------IDLSFLITAVGVVN 142 (307)
T ss_pred HHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcC-------CCCCEEEEcCCccc
Confidence 35666666666554 34589999999999998776642 24677777888664
No 49
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=95.76 E-value=0.025 Score=47.25 Aligned_cols=49 Identities=22% Similarity=0.383 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceE-EEEecCCc
Q 023160 85 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTFGQPR 138 (286)
Q Consensus 85 ~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~-~~TFG~Pr 138 (286)
..+.+.+++++....++++.|||+||.+|..++.... ..+. ++..++|.
T Consensus 52 ~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~ 101 (228)
T PF12697_consen 52 YAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYP-----DRVKGLVLLSPPP 101 (228)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSG-----GGEEEEEEESESS
T ss_pred hhhhhhhcccccccccccccccccccccccccccccc-----cccccceeecccc
Confidence 3444555555555568999999999999988886532 2444 45555444
No 50
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=95.74 E-value=0.021 Score=55.16 Aligned_cols=64 Identities=17% Similarity=0.225 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhh-cCCcce-EEEEecCCcccChhHHH
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN-LGIQNV-QVMTFGQPRIGNAAFAS 146 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~-~~~~~v-~~~TFG~PrvGn~~fa~ 146 (286)
..++.+.|+++.+.. +.+|++.||||||-++..+-..+... .....| ..++.|+|-.|......
T Consensus 103 ~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~~a~~ 168 (389)
T PF02450_consen 103 FTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGSPKALR 168 (389)
T ss_pred HHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCChHHHH
Confidence 345666666666666 88999999999999987654444222 111233 78999999998755433
No 51
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.72 E-value=0.07 Score=50.80 Aligned_cols=72 Identities=21% Similarity=0.306 Sum_probs=52.6
Q ss_pred CCcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCCcccChhHHHHHhhc-CCCEEEEEECCCccccc
Q 023160 97 GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRIGNAAFASYYTQL-VPNTFRVTNYHDIVPHL 168 (286)
Q Consensus 97 ~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~PrvGn~~fa~~~~~~-~~~~~riv~~~DiVP~l 168 (286)
++.+|.+.|||||+-+-..|-.+|++.....-| .++-+|+|...+..--.-..+. -.+.+++-..+|.|=..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r~vVsGr~vN~YS~~D~vL~~ 291 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIRSVVSGRLVNVYSENDWVLGF 291 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHHHHccCeEEEEecCcHHHHHH
Confidence 567899999999999988888888876333333 6899999999875443333443 35667777788987544
No 52
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=95.69 E-value=0.018 Score=48.88 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=25.3
Q ss_pred HHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 89 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 89 l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+..+++..+..++.+.|||+||.+|..++...
T Consensus 60 ~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~ 91 (251)
T TIGR03695 60 LATLLDQLGIEPFFLVGYSMGGRIALYYALQY 91 (251)
T ss_pred HHHHHHHcCCCeEEEEEeccHHHHHHHHHHhC
Confidence 45555555667899999999999999888764
No 53
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=95.67 E-value=0.04 Score=51.75 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHH--HcCCcEEEEeccChhHHHHHHHHHH
Q 023160 82 RPAIINAVERAKD--FYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 82 ~~~~~~~l~~~~~--~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
.+.+.+.++.+.. .++..++++.||||||++|..++..
T Consensus 143 ~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 143 VDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLK 182 (349)
T ss_pred HHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHh
Confidence 4455555555433 2345689999999999999887764
No 54
>PRK11071 esterase YqiA; Provisional
Probab=95.58 E-value=0.02 Score=49.52 Aligned_cols=35 Identities=20% Similarity=0.182 Sum_probs=26.6
Q ss_pred HHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 86 INAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 86 ~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.+.+.++.++.+..++.+.||||||.+|..+|...
T Consensus 48 ~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 82 (190)
T PRK11071 48 AELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCF 82 (190)
T ss_pred HHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHc
Confidence 34445555556667899999999999999888754
No 55
>PLN02965 Probable pheophorbidase
Probab=95.56 E-value=0.018 Score=51.38 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHcCC-cEEEEeccChhHHHHHHHHHHh
Q 023160 84 AIINAVERAKDFYGD-LNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~-~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.+.+.+.+++++.+. .++++.||||||.+|..++...
T Consensus 56 ~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~ 93 (255)
T PLN02965 56 QYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKF 93 (255)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhC
Confidence 333444555554443 5899999999999999888753
No 56
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=95.50 E-value=0.044 Score=51.02 Aligned_cols=39 Identities=26% Similarity=0.405 Sum_probs=30.4
Q ss_pred hHHHHHHHHHH--HHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 81 IRPAIINAVER--AKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 81 ~~~~~~~~l~~--~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
+.+.+.+.+.. .+.++++....+.|||||||+|.+++..
T Consensus 109 ~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k 149 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALK 149 (313)
T ss_pred HHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhh
Confidence 34455555554 4567889999999999999999998875
No 57
>KOG2088 consensus Predicted lipase/calmodulin-binding heat-shock protein [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=95.47 E-value=0.0069 Score=61.40 Aligned_cols=132 Identities=16% Similarity=0.154 Sum_probs=79.0
Q ss_pred EEEECCCCeEEEEEcCCCCCChhHHHhhccccccccCCCC-CCCceEehhhHHHhhhhchHHHHHH--HHHHHHHHcCCc
Q 023160 23 LGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPG-MSDAMVHHGFYSAYHNTTIRPAIIN--AVERAKDFYGDL 99 (286)
Q Consensus 23 V~~~~~~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~-~~~~~VH~GF~~~~~~~~~~~~~~~--~l~~~~~~~~~~ 99 (286)
|..|...+..+++.|||. ++.|.++|+.....-...-. ..+..-|+--.. ..+..+.+ .|..+...+|.+
T Consensus 310 vi~d~~~~s~~~~~r~~~--sl~d~l~~v~~e~~~l~~~~~~d~~~~~~~~~~-----~~r~~~~~~~~l~~i~~~~~~~ 382 (596)
T KOG2088|consen 310 VITDYVKQSDVLPVRGAT--SLDDLLTDVLLEPELLGLSCIRDDALPERQAAV-----DPRSTLAEGSRLLSIVSRKPCR 382 (596)
T ss_pred HHHhccccceeeeecccc--chhhhhhhhhcCccccccccchhhhhccccccc-----chhhhhCccchhhHHHhhCccc
Confidence 556777889999999998 89999999875431111000 011111220011 11222211 234455566776
Q ss_pred EEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc-cChhHHHHHhhcCCCEEEEEECCCcccccCCC
Q 023160 100 NIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI-GNAAFASYYTQLVPNTFRVTNYHDIVPHLPPY 171 (286)
Q Consensus 100 ~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv-Gn~~fa~~~~~~~~~~~riv~~~DiVP~lP~~ 171 (286)
.. +.||||||+|+ .++.. +...+.++.|+.|.. ....-+++..+++ ..++-+.|++|++-..
T Consensus 383 ~~-~~~~~l~g~l~----v~lr~--~~~~l~~~a~s~~~~~~s~~~~e~~~~~~---~svvl~~~~~~r~s~~ 445 (596)
T KOG2088|consen 383 QG-IFGHVLGGGLG----VDLRR--EHPVLSCYAYSPPGGLWSERGAERGESFV---TSVVLGDDVMPRLSEQ 445 (596)
T ss_pred cc-cccccccCccc----ccccc--CCCceeeeecCCCcceecchhHHHHHHHH---Hhhhcccccccccchh
Confidence 66 99999999954 33433 335778999996655 3555555555543 3577788999988654
No 58
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=95.47 E-value=0.051 Score=47.59 Aligned_cols=36 Identities=25% Similarity=0.435 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 85 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 85 ~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+.+.+..+++.....++++.||||||.+|..++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~ 117 (288)
T TIGR01250 82 FVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKY 117 (288)
T ss_pred HHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhC
Confidence 333444444544555699999999999999888653
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=95.44 E-value=0.03 Score=52.76 Aligned_cols=50 Identities=16% Similarity=0.114 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCCc
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPR 138 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~Pr 138 (286)
.+.+.++.+++..+..++.+.|||+||.++..++... + .++ .++..++|-
T Consensus 121 ~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~----~-~~v~~lv~~~~p~ 171 (350)
T TIGR01836 121 YIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALY----P-DKIKNLVTMVTPV 171 (350)
T ss_pred HHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhC----c-hheeeEEEecccc
Confidence 3556666777777888999999999999998776542 2 234 355555553
No 60
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=95.33 E-value=0.024 Score=51.47 Aligned_cols=35 Identities=14% Similarity=0.048 Sum_probs=25.4
Q ss_pred HHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 86 INAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 86 ~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.+.+..+++.....++.+.||||||.+|..+|...
T Consensus 89 a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~ 123 (294)
T PLN02824 89 GEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDA 123 (294)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhC
Confidence 33444444444556899999999999999888753
No 61
>PRK10673 acyl-CoA esterase; Provisional
Probab=95.28 E-value=0.028 Score=49.34 Aligned_cols=30 Identities=23% Similarity=0.127 Sum_probs=22.6
Q ss_pred HHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 91 RAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 91 ~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.+++..+..++.+.||||||.+|..++...
T Consensus 73 ~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~ 102 (255)
T PRK10673 73 DTLDALQIEKATFIGHSMGGKAVMALTALA 102 (255)
T ss_pred HHHHHcCCCceEEEEECHHHHHHHHHHHhC
Confidence 333334445799999999999999888664
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=95.22 E-value=0.063 Score=49.26 Aligned_cols=59 Identities=15% Similarity=0.298 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceE-EEEecCCcc-cChhHHHH
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQ-VMTFGQPRI-GNAAFASY 147 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~-~~TFG~Prv-Gn~~fa~~ 147 (286)
.+.+...++.+.+. +..+|++.||||||.+|..++... + ..+. ++.. +|-+ |...+.++
T Consensus 83 ~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~----p-~~v~~lVL~-~P~~~g~~~l~~~ 143 (266)
T TIGR03101 83 KEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPL----A-AKCNRLVLW-QPVVSGKQQLQQF 143 (266)
T ss_pred HHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhC----c-cccceEEEe-ccccchHHHHHHH
Confidence 34555555544443 456899999999999999877553 2 2343 4444 4544 44444443
No 63
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.16 E-value=0.085 Score=45.69 Aligned_cols=38 Identities=26% Similarity=0.347 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHcC--CcEEEEeccChhHHHHHHHHHH
Q 023160 82 RPAIINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
.+++.+.++.+.+++. ..+|.++|||.||.+|.+++..
T Consensus 45 ~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 4567777777766643 5789999999999999998874
No 64
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=95.06 E-value=0.14 Score=46.47 Aligned_cols=37 Identities=14% Similarity=0.110 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHcCC-cEEEEeccChhHHHHHHHHH
Q 023160 82 RPAIINAVERAKDFYGD-LNIMVTGHSMGGAMAAFCGL 118 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~-~~I~vTGHSLGGAlA~L~a~ 118 (286)
..++.+.++.++++.++ .+|++.||||||.+|.+++.
T Consensus 82 ~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~ 119 (274)
T TIGR03100 82 DADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAP 119 (274)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhh
Confidence 45667777777666554 46999999999999888764
No 65
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=95.06 E-value=0.036 Score=47.90 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=24.3
Q ss_pred HHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 87 NAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 87 ~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+.+.++.+.....++.+.||||||.+|..++...
T Consensus 68 ~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 101 (257)
T TIGR03611 68 DDVLQLLDALNIERFHFVGHALGGLIGLQLALRY 101 (257)
T ss_pred HHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHC
Confidence 3344444444446799999999999999887653
No 66
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=94.97 E-value=0.068 Score=52.54 Aligned_cols=75 Identities=19% Similarity=0.150 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHH--cCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEe---cCCcccChhHHHHHhhcCCCEEE
Q 023160 83 PAIINAVERAKDF--YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTF---GQPRIGNAAFASYYTQLVPNTFR 157 (286)
Q Consensus 83 ~~~~~~l~~~~~~--~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TF---G~PrvGn~~fa~~~~~~~~~~~r 157 (286)
..+.+.|+.+.+. .+-.++.+.||||||.+|..++.... .+|.-++- +.|......-...++.--+.++-
T Consensus 101 ~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p-----~rV~rItgLDPAgP~F~~~~~~~rLd~~DA~fVd 175 (442)
T TIGR03230 101 KDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTK-----HKVNRITGLDPAGPTFEYADAPSTLSPDDADFVD 175 (442)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCC-----cceeEEEEEcCCCCcccccccccccCCCCCCeEE
Confidence 3444445444332 24568999999999999999886542 23333332 23332222222233333345677
Q ss_pred EEECC
Q 023160 158 VTNYH 162 (286)
Q Consensus 158 iv~~~ 162 (286)
|+|.+
T Consensus 176 VIHTd 180 (442)
T TIGR03230 176 VLHTN 180 (442)
T ss_pred EEEec
Confidence 88864
No 67
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=94.96 E-value=0.12 Score=47.86 Aligned_cols=85 Identities=25% Similarity=0.254 Sum_probs=54.0
Q ss_pred CeEEEEEcCCCCC-----ChhHHHhhccccccccCCCCCCCceEehhhHHHhhhhchHHHHHHHHHHHHHHcC-CcEEEE
Q 023160 30 NAIVIAFRGTQEH-----SIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYG-DLNIMV 103 (286)
Q Consensus 30 ~~ivVafRGT~~~-----s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~~-~~~I~v 103 (286)
...||+|-|+-++ -+.+++.+..++.+.+.|||..... .+.-..|.+ .+-.+.++.++.+-. ..++++
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~--~~~~~~~~n----~er~~~~~~ll~~l~i~~~~i~ 108 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTP--GYPDQQYTN----EERQNFVNALLDELGIKGKLIF 108 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCC--CCcccccCh----HHHHHHHHHHHHHcCCCCceEE
Confidence 3479999999763 1678888888887888899863211 111222322 122223333333333 468999
Q ss_pred eccChhHHHHHHHHHHh
Q 023160 104 TGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 104 TGHSLGGAlA~L~a~~l 120 (286)
.|||.|+.-|+.+|..+
T Consensus 109 ~gHSrGcenal~la~~~ 125 (297)
T PF06342_consen 109 LGHSRGCENALQLAVTH 125 (297)
T ss_pred EEeccchHHHHHHHhcC
Confidence 99999999998887754
No 68
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=94.95 E-value=0.038 Score=49.78 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=23.0
Q ss_pred HHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 89 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 89 l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+.++++...-.++.+.||||||.+|..+|.+.
T Consensus 81 ~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~ 112 (276)
T TIGR02240 81 AARMLDYLDYGQVNAIGVSWGGALAQQFAHDY 112 (276)
T ss_pred HHHHHHHhCcCceEEEEECHHHHHHHHHHHHC
Confidence 33334333445799999999999999888754
No 69
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=94.92 E-value=0.041 Score=49.19 Aligned_cols=34 Identities=32% Similarity=0.334 Sum_probs=25.6
Q ss_pred HHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 87 NAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 87 ~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+.+.++++.....++.+.||||||.+|..++...
T Consensus 89 ~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~ 122 (282)
T TIGR03343 89 RAVKGLMDALDIEKAHLVGNSMGGATALNFALEY 122 (282)
T ss_pred HHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhC
Confidence 3344555555666899999999999999888754
No 70
>PRK03204 haloalkane dehalogenase; Provisional
Probab=94.90 E-value=0.055 Score=49.39 Aligned_cols=36 Identities=14% Similarity=0.247 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
...+.+..+++..+..+++++||||||++|...+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~ 121 (286)
T PRK03204 86 EHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVE 121 (286)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHh
Confidence 444455555555566689999999999999887764
No 71
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=94.72 E-value=0.04 Score=48.71 Aligned_cols=34 Identities=29% Similarity=0.186 Sum_probs=23.9
Q ss_pred HHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 86 INAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 86 ~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
.+.+.++++..+..++++.||||||.+|..++..
T Consensus 82 ~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 82 AEDLSALCAAEGLSPDGVIGHSAGAAIALRLALD 115 (278)
T ss_pred HHHHHHHHHHcCCCCceEEEECccHHHHHHHHHh
Confidence 3334444444444578999999999999888754
No 72
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=94.70 E-value=0.045 Score=47.69 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHcC--CcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 84 AIINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 84 ~~~~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
.+.+.+..+.++++ ..+|.+.|||+||.+|..++.... ..-..++.++++..
T Consensus 78 ~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p----~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 78 SLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYP----DVFAGGASNAGLPY 131 (212)
T ss_pred HHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCc----hhheEEEeecCCcc
Confidence 44555566665654 358999999999999988876532 22234556665543
No 73
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=94.69 E-value=0.094 Score=48.95 Aligned_cols=36 Identities=33% Similarity=0.315 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
.+.+.+..+++..+..++.+.||||||.+|..+|..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 217 (371)
T PRK14875 182 ELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAAR 217 (371)
T ss_pred HHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHh
Confidence 444555555566665689999999999999877764
No 74
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.65 E-value=0.068 Score=42.57 Aligned_cols=34 Identities=35% Similarity=0.452 Sum_probs=25.3
Q ss_pred CCcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecC
Q 023160 97 GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQ 136 (286)
Q Consensus 97 ~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~ 136 (286)
...+|++.|||+||.+|..++..- ..+ .++.++.
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~------~~v~~~v~~~~ 93 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN------PRVKAVVLLSP 93 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS------TTESEEEEESE
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc------cceeEEEEecC
Confidence 457999999999999999888742 233 4555555
No 75
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.63 E-value=0.18 Score=45.12 Aligned_cols=53 Identities=19% Similarity=0.244 Sum_probs=41.5
Q ss_pred CCcEEEEeccChhHHHHHHHHHHhhhhc--CCcceEEEEecCCcccChhHHHHHh
Q 023160 97 GDLNIMVTGHSMGGAMAAFCGLDLTVNL--GIQNVQVMTFGQPRIGNAAFASYYT 149 (286)
Q Consensus 97 ~~~~I~vTGHSLGGAlA~L~a~~l~~~~--~~~~v~~~TFG~PrvGn~~fa~~~~ 149 (286)
++-+++|.|+|+|+.+|.....+|+... ...++..+.+|-|+--+..+...+.
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~rp~GG~~~r~~ 100 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPRRPNGGILARFP 100 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCCCCCCcchhccC
Confidence 5678999999999999999999988742 2357899999999876655544433
No 76
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.59 E-value=0.054 Score=51.37 Aligned_cols=42 Identities=24% Similarity=0.407 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhh
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
....+.+.|++.+.+.+--+.++.|||+||-||+..|+..-.
T Consensus 142 ~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPe 183 (365)
T KOG4409|consen 142 AEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPE 183 (365)
T ss_pred chHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChH
Confidence 345788888888888887799999999999999998887644
No 77
>PRK00870 haloalkane dehalogenase; Provisional
Probab=94.50 E-value=0.058 Score=49.30 Aligned_cols=35 Identities=6% Similarity=0.046 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 86 INAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 86 ~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.+.+.+++++.+..++.+.||||||.+|..++...
T Consensus 102 a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 136 (302)
T PRK00870 102 VEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEH 136 (302)
T ss_pred HHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhC
Confidence 33444444444555899999999999998888653
No 78
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.45 E-value=0.55 Score=44.85 Aligned_cols=142 Identities=14% Similarity=0.123 Sum_probs=87.4
Q ss_pred CCCeEEEEEcCCCCCChhHHHh-------hccc--cccccCCCCCCCceEehhhHHHhhhhchHHHHHHHHHHHHHHcCC
Q 023160 28 DLNAIVIAFRGTQEHSIQNWIE-------DLFW--KQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGD 98 (286)
Q Consensus 28 ~~~~ivVafRGT~~~s~~dwl~-------Dl~~--~~~~~~~p~~~~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~~~ 98 (286)
..++|+|...|=+. ++.|-.. |... ..+-+.||. .+++-.=-++--....-++.+...|+.+.++.+.
T Consensus 114 ~~k~vlvFvHGfNn-tf~dav~R~aqI~~d~g~~~~pVvFSWPS--~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 114 SAKTVLVFVHGFNN-TFEDAVYRTAQIVHDSGNDGVPVVFSWPS--RGSLLGYNYDRESTNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CCCeEEEEEcccCC-chhHHHHHHHHHHhhcCCCcceEEEEcCC--CCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC
Confidence 56889999999873 5554332 3222 222344553 3332110011000012356777788888877789
Q ss_pred cEEEEeccChhHHHHHHHHHHhhhhcC---CcceEEEEecCCcccChhHHHHHhhcC---CCEEEEEECCCcccccCCCC
Q 023160 99 LNIMVTGHSMGGAMAAFCGLDLTVNLG---IQNVQVMTFGQPRIGNAAFASYYTQLV---PNTFRVTNYHDIVPHLPPYY 172 (286)
Q Consensus 99 ~~I~vTGHSLGGAlA~L~a~~l~~~~~---~~~v~~~TFG~PrvGn~~fa~~~~~~~---~~~~riv~~~DiVP~lP~~~ 172 (286)
.+|.+..||||.-+..-+--.|+.+-. ..+++=+-+.+|.+.-..|.+-+..+. +.+.-++-.+|..+.++..+
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~~~mg~~~~~ft~~~s~dDral~~s~~i 270 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQIAAMGKPDPPFTLFVSRDDRALALSRRI 270 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHHHHhcCCCCCeeEEecccchhhcccccc
Confidence 999999999999876554444433211 235667889999998888887666543 34555777888888888654
No 79
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=94.32 E-value=0.088 Score=50.90 Aligned_cols=36 Identities=31% Similarity=0.397 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 85 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 85 ~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+.+.+.+.++.....++++.||||||.+|..++...
T Consensus 162 ~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~ 197 (402)
T PLN02894 162 FIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKH 197 (402)
T ss_pred HHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhC
Confidence 344444444444445799999999999999888754
No 80
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=94.14 E-value=0.07 Score=48.57 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=22.9
Q ss_pred HHHHHHHHcC-CcEEEEeccChhHHHHHHHHHH
Q 023160 88 AVERAKDFYG-DLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 88 ~l~~~~~~~~-~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
.+.++++... ..++++.||||||.+|..++..
T Consensus 75 ~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~ 107 (273)
T PLN02211 75 PLIDFLSSLPENEKVILVGHSAGGLSVTQAIHR 107 (273)
T ss_pred HHHHHHHhcCCCCCEEEEEECchHHHHHHHHHh
Confidence 3444443332 4689999999999999888754
No 81
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=94.04 E-value=0.081 Score=48.64 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
++.+.+..+++..+..++++.||||||.+|..++...
T Consensus 80 ~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~ 116 (306)
T TIGR01249 80 DLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTH 116 (306)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHC
Confidence 4445555555555556799999999999999888764
No 82
>PRK03592 haloalkane dehalogenase; Provisional
Probab=93.93 E-value=0.14 Score=46.45 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=23.3
Q ss_pred HHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 89 VERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 89 l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+..+++..+..++.+.|||+||.+|..++...
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 114 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARH 114 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhC
Confidence 33334434456899999999999999888653
No 83
>PRK10566 esterase; Provisional
Probab=93.93 E-value=0.075 Score=46.84 Aligned_cols=36 Identities=22% Similarity=0.066 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHc--CCcEEEEeccChhHHHHHHHHHH
Q 023160 84 AIINAVERAKDFY--GDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 84 ~~~~~l~~~~~~~--~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
++...+..+.++. ...+|.+.|||+||.+|..++..
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 3334444444432 24689999999999999877653
No 84
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=93.93 E-value=0.086 Score=49.59 Aligned_cols=37 Identities=30% Similarity=0.282 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHcCCcE-EEEeccChhHHHHHHHHHHh
Q 023160 84 AIINAVERAKDFYGDLN-IMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~-I~vTGHSLGGAlA~L~a~~l 120 (286)
.+.+.+..+++..+-.+ +.+.||||||.+|..++...
T Consensus 111 ~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 111 DDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 44455555555555556 99999999999999888763
No 85
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=93.86 E-value=0.13 Score=48.78 Aligned_cols=82 Identities=17% Similarity=0.135 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHH--cCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHhhcCCCEEEEE
Q 023160 82 RPAIINAVERAKDF--YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVT 159 (286)
Q Consensus 82 ~~~~~~~l~~~~~~--~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~~~~~~~~riv 159 (286)
...+.+.|..+... .+-.+|.+.||||||-+|-+++-.+.....-.+|...==+.|-..+......+++.-+.++-|+
T Consensus 131 g~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~~rL~~~DA~fVdvI 210 (331)
T PF00151_consen 131 GRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPSERLDKSDAKFVDVI 210 (331)
T ss_dssp HHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TTTS--GGGSSEEEEE
T ss_pred HHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCCChhHhhhccCCceEEEE
Confidence 34444555555533 2456899999999999999999988761111233322223444333332333444335677788
Q ss_pred ECCC
Q 023160 160 NYHD 163 (286)
Q Consensus 160 ~~~D 163 (286)
|.+-
T Consensus 211 HT~~ 214 (331)
T PF00151_consen 211 HTNA 214 (331)
T ss_dssp -SSE
T ss_pred EcCC
Confidence 7653
No 86
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=93.77 E-value=0.12 Score=44.31 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHH-----cCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCC
Q 023160 83 PAIINAVERAKDF-----YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQP 137 (286)
Q Consensus 83 ~~~~~~l~~~~~~-----~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~P 137 (286)
+++.++++.+++. +...+|++.|+|-||.||..++..+.... ...++.+..-+|
T Consensus 50 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~-~~~~~~~~~~~p 108 (211)
T PF07859_consen 50 EDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG-LPKPKGIILISP 108 (211)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT-TCHESEEEEESC
T ss_pred cccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhc-ccchhhhhcccc
Confidence 3455555555543 44669999999999999999998876642 234554444555
No 87
>PLN02442 S-formylglutathione hydrolase
Probab=93.65 E-value=0.11 Score=47.79 Aligned_cols=38 Identities=24% Similarity=0.176 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+.+.+.+++........++.|+|||+||.+|..+++..
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~ 164 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKN 164 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhC
Confidence 44444444443333456799999999999999888753
No 88
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=93.62 E-value=0.094 Score=44.58 Aligned_cols=22 Identities=23% Similarity=0.225 Sum_probs=18.8
Q ss_pred cEEEEeccChhHHHHHHHHHHh
Q 023160 99 LNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 99 ~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.++++.||||||++|..++...
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~~ 86 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAATH 86 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHHC
Confidence 5899999999999998887653
No 89
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=93.47 E-value=0.13 Score=44.73 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
..++.+.++.++.+.-.+.++|+||||-.|..+|-.+
T Consensus 44 ~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~ 80 (187)
T PF05728_consen 44 EAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERY 80 (187)
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHh
Confidence 3445555555555555599999999999999887543
No 90
>PRK11460 putative hydrolase; Provisional
Probab=93.46 E-value=0.12 Score=45.93 Aligned_cols=36 Identities=22% Similarity=0.165 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHcC--CcEEEEeccChhHHHHHHHHHH
Q 023160 84 AIINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 84 ~~~~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
.+.+.++.+.++++ ..+|++.|||+||++|..++..
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKA 123 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHh
Confidence 34444554444443 4589999999999999876653
No 91
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.30 E-value=0.088 Score=54.57 Aligned_cols=41 Identities=22% Similarity=0.303 Sum_probs=27.0
Q ss_pred CcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
...|++.||||||-+|..+... ....++..-.++|-++|-.
T Consensus 181 P~sVILVGHSMGGiVAra~~tl-kn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 181 PHSVILVGHSMGGIVARATLTL-KNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred CceEEEEeccchhHHHHHHHhh-hhhccchhhhhhhhcCccc
Confidence 3459999999999998776653 2222222225778887655
No 92
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=93.29 E-value=0.14 Score=46.68 Aligned_cols=36 Identities=28% Similarity=0.321 Sum_probs=25.3
Q ss_pred HHHHHHHHHHH-cC--CcEEEEeccChhHHHHHHHHHHh
Q 023160 85 IINAVERAKDF-YG--DLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 85 ~~~~l~~~~~~-~~--~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+.+.|..++++ ++ ..++.++|||+||.+|..+++..
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~ 159 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKN 159 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhC
Confidence 34444444433 33 45899999999999999988764
No 93
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.07 E-value=0.15 Score=46.67 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhh
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN 123 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~ 123 (286)
+-+.+...+..+++..|.-.+.+.||||||.+|.=+|..|...
T Consensus 47 l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~ 89 (257)
T COG3319 47 LDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQ 89 (257)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhC
Confidence 4445556666677777888999999999999999999888654
No 94
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=93.01 E-value=0.34 Score=45.81 Aligned_cols=82 Identities=21% Similarity=0.342 Sum_probs=51.9
Q ss_pred CCCe-EEEEEcCCCCCC-------hhHHHhhccccccccCCCCCCC------ceEehhhHHHhhhhchHHHHHHHHHHHH
Q 023160 28 DLNA-IVIAFRGTQEHS-------IQNWIEDLFWKQLDINYPGMSD------AMVHHGFYSAYHNTTIRPAIINAVERAK 93 (286)
Q Consensus 28 ~~~~-ivVafRGT~~~s-------~~dwl~Dl~~~~~~~~~p~~~~------~~VH~GF~~~~~~~~~~~~~~~~l~~~~ 93 (286)
+.+. .||.|=|-.+++ +..++..--|.-+-.++-+|.. ..-|.|.. .++...+..++
T Consensus 72 ~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t---------~D~~~~l~~l~ 142 (345)
T COG0429 72 AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGET---------EDIRFFLDWLK 142 (345)
T ss_pred ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccch---------hHHHHHHHHHH
Confidence 4455 899999988754 2233333223334445555543 23344432 46666677777
Q ss_pred HHcCCcEEEEeccChhH-HHHHHHHH
Q 023160 94 DFYGDLNIMVTGHSMGG-AMAAFCGL 118 (286)
Q Consensus 94 ~~~~~~~I~vTGHSLGG-AlA~L~a~ 118 (286)
+.+|..+++.+|-|||| .||..++-
T Consensus 143 ~~~~~r~~~avG~SLGgnmLa~ylge 168 (345)
T COG0429 143 ARFPPRPLYAVGFSLGGNMLANYLGE 168 (345)
T ss_pred HhCCCCceEEEEecccHHHHHHHHHh
Confidence 88899999999999999 56665553
No 95
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=92.93 E-value=0.12 Score=46.09 Aligned_cols=38 Identities=29% Similarity=0.307 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcC--CcEEEEeccChhHHHHHHHHHHhhh
Q 023160 85 IINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 85 ~~~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
|...|+.+.++|+ ..+|+++|+|.||+||..++..+..
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd 120 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD 120 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc
Confidence 4445566666776 5699999999999999988876544
No 96
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=92.76 E-value=0.23 Score=50.10 Aligned_cols=56 Identities=18% Similarity=0.152 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEE-EEecCCc
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQV-MTFGQPR 138 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~-~TFG~Pr 138 (286)
+.+.++|+.+++..+..+|.+.||+|||.+++++...++...+..+|+- +.|++|-
T Consensus 272 ~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 272 DALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred HHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccc
Confidence 3677788877777788899999999999999965444554444335654 4455543
No 97
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=92.65 E-value=0.16 Score=47.53 Aligned_cols=35 Identities=17% Similarity=0.087 Sum_probs=24.2
Q ss_pred HHHHHHHHHHcCCcE-EEEeccChhHHHHHHHHHHh
Q 023160 86 INAVERAKDFYGDLN-IMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 86 ~~~l~~~~~~~~~~~-I~vTGHSLGGAlA~L~a~~l 120 (286)
.+.+..+++..+-.+ +.+.||||||.+|..+|...
T Consensus 124 a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 124 ADAIALLLDALGIARLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred HHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHC
Confidence 344445555444334 57999999999999888764
No 98
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=92.63 E-value=0.17 Score=47.92 Aligned_cols=30 Identities=10% Similarity=0.083 Sum_probs=21.4
Q ss_pred HHHHHHHcCCcEEEEeccChhHHHHHHHHH
Q 023160 89 VERAKDFYGDLNIMVTGHSMGGAMAAFCGL 118 (286)
Q Consensus 89 l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~ 118 (286)
+..++++....++++.||||||.+|..++.
T Consensus 145 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 174 (360)
T PLN02679 145 ILDFLEEVVQKPTVLIGNSVGSLACVIAAS 174 (360)
T ss_pred HHHHHHHhcCCCeEEEEECHHHHHHHHHHH
Confidence 333344444568999999999999877664
No 99
>PRK10349 carboxylesterase BioH; Provisional
Probab=92.61 E-value=0.17 Score=44.81 Aligned_cols=22 Identities=27% Similarity=0.344 Sum_probs=18.8
Q ss_pred CcEEEEeccChhHHHHHHHHHH
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
..++.+.||||||.+|..+|..
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALT 94 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHh
Confidence 3578999999999999988764
No 100
>PLN02578 hydrolase
Probab=92.52 E-value=0.19 Score=47.47 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhh
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLT 121 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~ 121 (286)
.+++.+.++++ ...++++.|||+||.+|..+|....
T Consensus 139 a~~l~~~i~~~----~~~~~~lvG~S~Gg~ia~~~A~~~p 174 (354)
T PLN02578 139 RDQVADFVKEV----VKEPAVLVGNSLGGFTALSTAVGYP 174 (354)
T ss_pred HHHHHHHHHHh----ccCCeEEEEECHHHHHHHHHHHhCh
Confidence 34555544443 3457899999999999999888653
No 101
>PRK07581 hypothetical protein; Validated
Probab=92.40 E-value=0.23 Score=46.27 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHcCCcE-EEEeccChhHHHHHHHHHHhh
Q 023160 82 RPAIINAVERAKDFYGDLN-IMVTGHSMGGAMAAFCGLDLT 121 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~-I~vTGHSLGGAlA~L~a~~l~ 121 (286)
.+.+...++.+++..+-.+ ..|+||||||.+|..+|....
T Consensus 106 ~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P 146 (339)
T PRK07581 106 YDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYP 146 (339)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCH
Confidence 3444433333444445456 579999999999998887653
No 102
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.39 E-value=0.054 Score=52.20 Aligned_cols=92 Identities=21% Similarity=0.290 Sum_probs=56.4
Q ss_pred CCCeEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhhhc-----hHHHHHHHHHHHHHHcCCcEEE
Q 023160 28 DLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTT-----IRPAIINAVERAKDFYGDLNIM 102 (286)
Q Consensus 28 ~~~~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~I~ 102 (286)
..+.+||--+|-.+.+..+|..-+. +....+|. ...||.|+.+++..+. +-..+.+.+.+....+.-.+|.
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~--~~~kk~p~--~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kIS 153 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIE--QMTKKMPD--KLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKIS 153 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHH--hhhcCCCc--ceEeeeccccchhhccccceeeecccHHHHhhhhhccccceee
Confidence 3468888888887535677776542 11122332 3789999998775431 2223334444333333335899
Q ss_pred EeccChhHHHHHHHHHHhhhh
Q 023160 103 VTGHSMGGAMAAFCGLDLTVN 123 (286)
Q Consensus 103 vTGHSLGGAlA~L~a~~l~~~ 123 (286)
+.||||||-+|..+--++...
T Consensus 154 fvghSLGGLvar~AIgyly~~ 174 (405)
T KOG4372|consen 154 FVGHSLGGLVARYAIGYLYEK 174 (405)
T ss_pred eeeeecCCeeeeEEEEeeccc
Confidence 999999998887766555443
No 103
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=92.36 E-value=0.15 Score=45.49 Aligned_cols=36 Identities=22% Similarity=0.452 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
+++.+.|.++++.-+- +|-|+||||||.+|-.....
T Consensus 60 ~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 60 KQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHH
Confidence 5677777777766566 99999999999998766543
No 104
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=92.29 E-value=0.28 Score=48.78 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=23.3
Q ss_pred HHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 91 RAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 91 ~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
.+++..+..++.+.||||||.+|..+|..
T Consensus 266 ~ll~~lg~~k~~LVGhSmGG~iAl~~A~~ 294 (481)
T PLN03087 266 SVLERYKVKSFHIVAHSLGCILALALAVK 294 (481)
T ss_pred HHHHHcCCCCEEEEEECHHHHHHHHHHHh
Confidence 44555566789999999999999888765
No 105
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=92.13 E-value=0.32 Score=42.51 Aligned_cols=43 Identities=23% Similarity=0.267 Sum_probs=27.7
Q ss_pred CCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChh
Q 023160 97 GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAA 143 (286)
Q Consensus 97 ~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~ 143 (286)
+..+|++.|.|.||+||..+++.....+ -.++.+++.-.....
T Consensus 103 ~~~ri~l~GFSQGa~~al~~~l~~p~~~----~gvv~lsG~~~~~~~ 145 (216)
T PF02230_consen 103 DPSRIFLGGFSQGAAMALYLALRYPEPL----AGVVALSGYLPPESE 145 (216)
T ss_dssp -GGGEEEEEETHHHHHHHHHHHCTSSTS----SEEEEES---TTGCC
T ss_pred ChhheehhhhhhHHHHHHHHHHHcCcCc----CEEEEeecccccccc
Confidence 4678999999999999998887543322 256677655443333
No 106
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.05 E-value=0.3 Score=46.06 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhh
Q 023160 86 INAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLT 121 (286)
Q Consensus 86 ~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~ 121 (286)
...+.+...++...++.+.||||||.+|..+|..+.
T Consensus 115 v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P 150 (326)
T KOG1454|consen 115 VELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYP 150 (326)
T ss_pred HHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCc
Confidence 444555666666667999999999999999988753
No 107
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=91.64 E-value=0.33 Score=46.06 Aligned_cols=20 Identities=40% Similarity=0.586 Sum_probs=17.3
Q ss_pred CcEEEEeccChhHHHHHHHH
Q 023160 98 DLNIMVTGHSMGGAMAAFCG 117 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a 117 (286)
-.+|+.-||||||++|+.+.
T Consensus 214 a~~Ii~yG~SLGG~Vqa~AL 233 (365)
T PF05677_consen 214 AKNIILYGHSLGGGVQAEAL 233 (365)
T ss_pred hheEEEeeccccHHHHHHHH
Confidence 46899999999999998743
No 108
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=91.64 E-value=0.28 Score=46.84 Aligned_cols=37 Identities=32% Similarity=0.337 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHcCCcE-EEEeccChhHHHHHHHHHHh
Q 023160 84 AIINAVERAKDFYGDLN-IMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~-I~vTGHSLGGAlA~L~a~~l 120 (286)
.+.+.+..+++..+-.+ +.+.||||||++|..+|...
T Consensus 131 ~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 168 (379)
T PRK00175 131 DWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDY 168 (379)
T ss_pred HHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhC
Confidence 33444555555555456 58999999999999888764
No 109
>PLN00021 chlorophyllase
Probab=91.59 E-value=0.35 Score=45.33 Aligned_cols=23 Identities=30% Similarity=0.405 Sum_probs=20.1
Q ss_pred cEEEEeccChhHHHHHHHHHHhh
Q 023160 99 LNIMVTGHSMGGAMAAFCGLDLT 121 (286)
Q Consensus 99 ~~I~vTGHSLGGAlA~L~a~~l~ 121 (286)
.++.+.||||||.+|..+|....
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred hheEEEEECcchHHHHHHHhhcc
Confidence 57999999999999999987653
No 110
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=91.23 E-value=0.48 Score=44.61 Aligned_cols=38 Identities=26% Similarity=0.274 Sum_probs=26.7
Q ss_pred CcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccC
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGN 141 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn 141 (286)
..+|.++|.|+||++|.++|.. - .+|+...-.-|-.+|
T Consensus 174 ~~rI~v~G~SqGG~lal~~aaL-d-----~rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 174 GKRIGVTGGSQGGGLALAAAAL-D-----PRVKAAAADVPFLCD 211 (320)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH-S-----ST-SEEEEESESSSS
T ss_pred cceEEEEeecCchHHHHHHHHh-C-----ccccEEEecCCCccc
Confidence 4699999999999999988863 1 345555555555544
No 111
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=90.98 E-value=0.48 Score=41.54 Aligned_cols=82 Identities=16% Similarity=0.056 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcC---Ccce-EEEEecCCcccChhHHHHHhh--cCCCEEE
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLG---IQNV-QVMTFGQPRIGNAAFASYYTQ--LVPNTFR 157 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~---~~~v-~~~TFG~PrvGn~~fa~~~~~--~~~~~~r 157 (286)
..++.|.+..++.+. =.-|.|.|.||++|++++..+....+ ...+ -++.+++++..+..+...+.. +.-..++
T Consensus 88 ~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~i~iPtlH 166 (212)
T PF03959_consen 88 ESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPKISIPTLH 166 (212)
T ss_dssp HHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT---EEEE
T ss_pred HHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhccccCCCCeEE
Confidence 344455555555543 24589999999999998887665432 1223 466777777766555443321 1124677
Q ss_pred EEECCCccc
Q 023160 158 VTNYHDIVP 166 (286)
Q Consensus 158 iv~~~DiVP 166 (286)
|+=.+|.+-
T Consensus 167 v~G~~D~~~ 175 (212)
T PF03959_consen 167 VIGENDPVV 175 (212)
T ss_dssp EEETT-SSS
T ss_pred EEeCCCCCc
Confidence 887777654
No 112
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=90.93 E-value=0.32 Score=40.57 Aligned_cols=36 Identities=31% Similarity=0.414 Sum_probs=26.6
Q ss_pred HHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhh
Q 023160 86 INAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLT 121 (286)
Q Consensus 86 ~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~ 121 (286)
.+.+..+.+..+..++++.|||+||.+|..++....
T Consensus 75 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p 110 (282)
T COG0596 75 ADDLAALLDALGLEKVVLVGHSMGGAVALALALRHP 110 (282)
T ss_pred HHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcc
Confidence 444555555666556999999999999988887643
No 113
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=90.82 E-value=0.89 Score=39.28 Aligned_cols=55 Identities=16% Similarity=0.241 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccCh
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNA 142 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~ 142 (286)
++-.+.|.+..... ...+++++||||.+++...+..... ..--++--+.|-+.+.
T Consensus 44 ~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~----~V~GalLVAppd~~~~ 98 (181)
T COG3545 44 DDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQR----QVAGALLVAPPDVSRP 98 (181)
T ss_pred HHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhh----ccceEEEecCCCcccc
Confidence 33344444433333 3358999999999998877766543 2224666677777665
No 114
>PRK06489 hypothetical protein; Provisional
Probab=90.67 E-value=0.42 Score=45.14 Aligned_cols=25 Identities=32% Similarity=0.506 Sum_probs=19.2
Q ss_pred cCCcEE-EEeccChhHHHHHHHHHHh
Q 023160 96 YGDLNI-MVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 96 ~~~~~I-~vTGHSLGGAlA~L~a~~l 120 (286)
.+-.++ ++.||||||.+|...+...
T Consensus 150 lgi~~~~~lvG~SmGG~vAl~~A~~~ 175 (360)
T PRK06489 150 LGVKHLRLILGTSMGGMHAWMWGEKY 175 (360)
T ss_pred cCCCceeEEEEECHHHHHHHHHHHhC
Confidence 343455 5899999999999888764
No 115
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=90.59 E-value=0.38 Score=48.86 Aligned_cols=59 Identities=20% Similarity=0.226 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhh----------cCCcce-EEEEecCCcccCh
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN----------LGIQNV-QVMTFGQPRIGNA 142 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~----------~~~~~v-~~~TFG~PrvGn~ 142 (286)
.+.+.|+.+.+.+++.+++++||||||-++...--.+... ...+.| ..++.++|-.|..
T Consensus 198 rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~ 267 (642)
T PLN02517 198 RLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVP 267 (642)
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcH
Confidence 3444555555566688999999999998877543222100 001122 4677777777644
No 116
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=90.54 E-value=0.36 Score=46.65 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHcCCcEEE-EeccChhHHHHHHHHHHhh
Q 023160 84 AIINAVERAKDFYGDLNIM-VTGHSMGGAMAAFCGLDLT 121 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~-vTGHSLGGAlA~L~a~~l~ 121 (286)
++.+.+..++++.+-.++. |.||||||++|...|....
T Consensus 145 d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P 183 (389)
T PRK06765 145 DFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYP 183 (389)
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHCh
Confidence 3445555566666666775 9999999999998887643
No 117
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=90.32 E-value=0.54 Score=44.50 Aligned_cols=62 Identities=23% Similarity=0.257 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhH
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAF 144 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~f 144 (286)
.-.++...|++..+..+-.++.+.|||+||.+.-+..-.+.. +...-.++|.|.|.-|....
T Consensus 109 ~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~--~~~V~~~~tl~tp~~Gt~~~ 170 (336)
T COG1075 109 RGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGG--ANRVASVVTLGTPHHGTELA 170 (336)
T ss_pred cHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCc--cceEEEEEEeccCCCCchhh
Confidence 456888888888888888899999999999998754433321 12233788999999876654
No 118
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=90.01 E-value=0.54 Score=42.96 Aligned_cols=54 Identities=19% Similarity=0.334 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCC
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQP 137 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~P 137 (286)
-+..++..+.+.|.--++-++|||+||.-+.....+.......+.+ +.+..|+|
T Consensus 121 wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 121 WLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 3445556677788878899999999997665555555543222233 45666666
No 119
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=89.91 E-value=0.65 Score=44.20 Aligned_cols=46 Identities=26% Similarity=0.284 Sum_probs=33.4
Q ss_pred cCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHH
Q 023160 96 YGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFAS 146 (286)
Q Consensus 96 ~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~ 146 (286)
.+--++-+||-||||.+|.|+|.... ..+.++.+=+|..-...|.+
T Consensus 172 ~G~~~~g~~G~SmGG~~A~laa~~~p-----~pv~~vp~ls~~sAs~vFt~ 217 (348)
T PF09752_consen 172 EGYGPLGLTGISMGGHMAALAASNWP-----RPVALVPCLSWSSASVVFTE 217 (348)
T ss_pred cCCCceEEEEechhHhhHHhhhhcCC-----CceeEEEeecccCCCcchhh
Confidence 36669999999999999999987532 35667777666665544443
No 120
>PRK10162 acetyl esterase; Provisional
Probab=89.73 E-value=0.43 Score=44.53 Aligned_cols=25 Identities=28% Similarity=0.179 Sum_probs=21.6
Q ss_pred CcEEEEeccChhHHHHHHHHHHhhh
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
..+|.|.|||+||.||..+++.+..
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~ 177 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRD 177 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHh
Confidence 3589999999999999999887654
No 121
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=89.56 E-value=0.34 Score=42.81 Aligned_cols=43 Identities=26% Similarity=0.277 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhc
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNL 124 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~ 124 (286)
+.+++...|++-....+.. ..|.||||||..|..+++.....+
T Consensus 98 l~~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~F 140 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPDLF 140 (251)
T ss_dssp HHTHHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTTTE
T ss_pred hhccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCcccc
Confidence 3344444444322222233 899999999999999888754433
No 122
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=89.27 E-value=0.6 Score=46.20 Aligned_cols=59 Identities=17% Similarity=0.211 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHHcCC---cEEEEeccChhHHHHHHHHHHhhhhcC-----CcceEEEEecCCcc
Q 023160 81 IRPAIINAVERAKDFYGD---LNIMVTGHSMGGAMAAFCGLDLTVNLG-----IQNVQVMTFGQPRI 139 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~---~~I~vTGHSLGGAlA~L~a~~l~~~~~-----~~~v~~~TFG~Prv 139 (286)
+..++.+.++.+.+++|. .+++++|||.||..+...|.++..... .-+++-+..|.|-+
T Consensus 150 ~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 150 VSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 456777778888777875 789999999999988888877754321 12456666666655
No 123
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=89.06 E-value=0.93 Score=40.14 Aligned_cols=56 Identities=16% Similarity=0.101 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHcC-CcEEEEeccChhHHHHHHHHHHhhhhcC--CcceEEEEecCC
Q 023160 82 RPAIINAVERAKDFYG-DLNIMVTGHSMGGAMAAFCGLDLTVNLG--IQNVQVMTFGQP 137 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~-~~~I~vTGHSLGGAlA~L~a~~l~~~~~--~~~v~~~TFG~P 137 (286)
...+.++....++.++ +..+++.|||.|+.+...+--+.....+ ..-|.+|..|.|
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~rLVAAYliG~~ 135 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLRKRLVAAYLIGYP 135 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHHhhhheeeecCcc
Confidence 3466667777666664 6789999999999987655433221111 223567777766
No 124
>PRK05855 short chain dehydrogenase; Validated
Probab=88.88 E-value=0.54 Score=46.54 Aligned_cols=22 Identities=14% Similarity=0.058 Sum_probs=17.5
Q ss_pred CcEEEEeccChhHHHHHHHHHH
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
..++++.||||||.+|..++..
T Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 93 DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CCcEEEEecChHHHHHHHHHhC
Confidence 4459999999999888766544
No 125
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=88.46 E-value=1.4 Score=40.27 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=35.4
Q ss_pred chHHHHHHH---HHHHHHHc--CCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 80 TIRPAIINA---VERAKDFY--GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 80 ~~~~~~~~~---l~~~~~~~--~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
.+.+|+... |++...++ ++.+|++.|||.|+-||+-..-++.. ...+|.-.-+=-|.+
T Consensus 60 sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~--~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 60 SLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPD--LKFRVKKVILLFPTI 122 (266)
T ss_pred CHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccc--cCCceeEEEEeCCcc
Confidence 355666544 44445444 68899999999999998766655441 123444444444544
No 126
>PLN02872 triacylglycerol lipase
Probab=88.01 E-value=0.68 Score=44.86 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHH
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAF 115 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L 115 (286)
.++.+.|+.+++. ...++.++|||+||.+|..
T Consensus 145 ~Dl~a~id~i~~~-~~~~v~~VGhS~Gg~~~~~ 176 (395)
T PLN02872 145 YDLAEMIHYVYSI-TNSKIFIVGHSQGTIMSLA 176 (395)
T ss_pred HHHHHHHHHHHhc-cCCceEEEEECHHHHHHHH
Confidence 3555555555443 2368999999999998863
No 127
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=87.83 E-value=1.2 Score=37.22 Aligned_cols=30 Identities=27% Similarity=0.352 Sum_probs=23.8
Q ss_pred HHHcCCcEEEEeccChhHHHHHHHHHHhhh
Q 023160 93 KDFYGDLNIMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 93 ~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
.+..+..++.+.|||+||.+|...+..+..
T Consensus 58 ~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~ 87 (212)
T smart00824 58 LRAAGGRPFVLVGHSSGGLLAHAVAARLEA 87 (212)
T ss_pred HHhcCCCCeEEEEECHHHHHHHHHHHHHHh
Confidence 344456678999999999999888887654
No 128
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.73 E-value=2.4 Score=42.34 Aligned_cols=75 Identities=19% Similarity=0.200 Sum_probs=52.0
Q ss_pred HcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCCcccChhHHHHHhhcC-CCEEEEEECCCcccccC
Q 023160 95 FYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRIGNAAFASYYTQLV-PNTFRVTNYHDIVPHLP 169 (286)
Q Consensus 95 ~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~PrvGn~~fa~~~~~~~-~~~~riv~~~DiVP~lP 169 (286)
..+..+|.++|.|||+-+-.-|-..|++.....-| .||-||+|-+-....=.-....+ ++++++--.+|.+=.+-
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~k~r~vVsGRFVNgYs~nDW~L~~l 519 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWLKARSVVSGRFVNGYSTNDWTLGYL 519 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHHHHHhheecceeeeeecchHHHHHH
Confidence 44677899999999999888788888875333334 69999999997665444344444 44555555677665443
No 129
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=87.40 E-value=1.4 Score=40.77 Aligned_cols=56 Identities=25% Similarity=0.318 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHc------CCcEEEEeccChhHHHHHHHHHHhhhhcC-Ccc--eEEEEecCCcc
Q 023160 83 PAIINAVERAKDFY------GDLNIMVTGHSMGGAMAAFCGLDLTVNLG-IQN--VQVMTFGQPRI 139 (286)
Q Consensus 83 ~~~~~~l~~~~~~~------~~~~I~vTGHSLGGAlA~L~a~~l~~~~~-~~~--v~~~TFG~Prv 139 (286)
..+++.|+.+++.. ++.++.+.|||.||. |++.|.+++..+- .-+ +.-..-|+|..
T Consensus 49 ~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~-Aa~~AA~l~~~YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 49 YAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQ-AALWAAELAPSYAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred HHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHH-HHHHHHHHhHHhCcccccceeEEeccCCcc
Confidence 35566666555422 256899999997754 5566777776653 234 66666777765
No 130
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=87.32 E-value=1.5 Score=42.74 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=24.5
Q ss_pred CcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCC
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQP 137 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~P 137 (286)
..+|.++||||||.+|..+|..- ...+ .++..++|
T Consensus 264 ~~ri~l~G~S~GG~~Al~~A~~~-----p~ri~a~V~~~~~ 299 (414)
T PRK05077 264 HTRVAAFGFRFGANVAVRLAYLE-----PPRLKAVACLGPV 299 (414)
T ss_pred cccEEEEEEChHHHHHHHHHHhC-----CcCceEEEEECCc
Confidence 36899999999999999877531 1234 35555554
No 131
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=86.98 E-value=0.65 Score=43.61 Aligned_cols=40 Identities=23% Similarity=0.355 Sum_probs=24.9
Q ss_pred CCceEehhhHHHhhhhchHHHHHHHHHHHHHHcCCcEEEEeccChhH
Q 023160 64 SDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG 110 (286)
Q Consensus 64 ~~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG 110 (286)
+...+|. |. .+...+...+......+...++.+.||||||
T Consensus 95 p~~~~h~-----~~--~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 95 PKITVHN-----YE--AMAEDVKLFIDGVGGSTRLDPVVLLGHSMGG 134 (315)
T ss_pred ccccccC-----HH--HHHHHHHHHHHHcccccccCCceecccCcch
Confidence 3456666 32 3344555555444433456789999999999
No 132
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=86.83 E-value=1.4 Score=40.56 Aligned_cols=26 Identities=31% Similarity=0.336 Sum_probs=23.2
Q ss_pred CcEEEEeccChhHHHHHHHHHHhhhh
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLTVN 123 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~~~ 123 (286)
..+|.|.|||-||.||..+++.+...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhc
Confidence 56899999999999999999988764
No 133
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=86.66 E-value=1.3 Score=42.68 Aligned_cols=50 Identities=6% Similarity=-0.021 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCC
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQP 137 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~P 137 (286)
.+.+.|..++++....++.+.|||+||++|..++... +..--.++..++|
T Consensus 182 ~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~----P~~v~~lILi~~~ 231 (383)
T PLN03084 182 EYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAH----PDKIKKLILLNPP 231 (383)
T ss_pred HHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhC----hHhhcEEEEECCC
Confidence 3344444444444455799999999999887777643 2222245555554
No 134
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=86.47 E-value=1.2 Score=39.05 Aligned_cols=53 Identities=17% Similarity=0.131 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHcCCcEE-EEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCccc
Q 023160 82 RPAIINAVERAKDFYGDLNI-MVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIG 140 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I-~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvG 140 (286)
.+....++..++.++|+... ++.|.|.|+-+|..++.++. ...++.-..|.++
T Consensus 85 ~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~------e~~~~is~~p~~~ 138 (210)
T COG2945 85 LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRP------EILVFISILPPIN 138 (210)
T ss_pred HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcc------cccceeeccCCCC
Confidence 35667778888899998877 99999999999999998753 3345555677776
No 135
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=86.34 E-value=0.92 Score=38.96 Aligned_cols=37 Identities=24% Similarity=0.418 Sum_probs=27.5
Q ss_pred HHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhh
Q 023160 86 INAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 86 ~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
..++.++.+..-.-++++-||||||-+|++.+-++..
T Consensus 76 ~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 76 IVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred HHHHHHHHhcccCCceeeccccccchHHHHHHHhhcC
Confidence 3344445544445579999999999999999988754
No 136
>COG1647 Esterase/lipase [General function prediction only]
Probab=86.28 E-value=1.8 Score=38.81 Aligned_cols=52 Identities=21% Similarity=0.229 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
|...+.+..+.++++ +--+|.|+|-||||-+|..+|..+ + .-++++..+|.-
T Consensus 68 W~~~v~d~Y~~L~~~-gy~eI~v~GlSmGGv~alkla~~~----p--~K~iv~m~a~~~ 119 (243)
T COG1647 68 WWEDVEDGYRDLKEA-GYDEIAVVGLSMGGVFALKLAYHY----P--PKKIVPMCAPVN 119 (243)
T ss_pred HHHHHHHHHHHHHHc-CCCeEEEEeecchhHHHHHHHhhC----C--ccceeeecCCcc
Confidence 344556666665522 445899999999999998888654 2 124566666643
No 137
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=85.99 E-value=0.63 Score=44.84 Aligned_cols=20 Identities=40% Similarity=0.418 Sum_probs=16.7
Q ss_pred cEEEEeccChhHHHHHHHHH
Q 023160 99 LNIMVTGHSMGGAMAAFCGL 118 (286)
Q Consensus 99 ~~I~vTGHSLGGAlA~L~a~ 118 (286)
.+|.+.|||+|||.|..++.
T Consensus 228 ~~i~~~GHSFGGATa~~~l~ 247 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALR 247 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHH
T ss_pred hheeeeecCchHHHHHHHHh
Confidence 47999999999998876554
No 138
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=85.66 E-value=1 Score=51.31 Aligned_cols=37 Identities=16% Similarity=0.298 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.+.+.+.++++.....++++.||||||.+|..++...
T Consensus 1430 ~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~ 1466 (1655)
T PLN02980 1430 LVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRF 1466 (1655)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhC
Confidence 3344444444444456899999999999999887654
No 139
>KOG3101 consensus Esterase D [General function prediction only]
Probab=85.27 E-value=0.13 Score=45.92 Aligned_cols=79 Identities=27% Similarity=0.354 Sum_probs=45.7
Q ss_pred CcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecC---Cc---ccChhHHHHHhhcCCCEEEEEECCCcccccCCC
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQ---PR---IGNAAFASYYTQLVPNTFRVTNYHDIVPHLPPY 171 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~---Pr---vGn~~fa~~~~~~~~~~~riv~~~DiVP~lP~~ 171 (286)
..++-|+||||||-=|..+++.=...+ -.|-.|+. |- -|-++|.-|+-.... .+ ...|.- +|
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lkn~~ky----kSvSAFAPI~NP~~cpWGqKAf~gYLG~~ka-~W---~~yDat-~l--- 207 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLKNPSKY----KSVSAFAPICNPINCPWGQKAFTGYLGDNKA-QW---EAYDAT-HL--- 207 (283)
T ss_pred chhcceeccccCCCceEEEEEcCcccc----cceeccccccCcccCcchHHHhhcccCCChH-HH---hhcchH-HH---
Confidence 456899999999998887775422111 12334432 11 177788777765321 01 112221 11
Q ss_pred CCCCCCCCeeecCeeEEEccCC
Q 023160 172 YSYFPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 172 ~~~~~~~~y~H~g~ev~~~~~~ 193 (286)
...|.|.+.||.|+...
T Consensus 208 -----ik~y~~~~~~ilIdqG~ 224 (283)
T KOG3101|consen 208 -----IKNYRGVGDDILIDQGA 224 (283)
T ss_pred -----HHhcCCCCccEEEecCc
Confidence 13689999999997654
No 140
>PRK07868 acyl-CoA synthetase; Validated
Probab=85.11 E-value=1.8 Score=46.85 Aligned_cols=49 Identities=24% Similarity=0.450 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCC
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQP 137 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~P 137 (286)
.+.+++..+++. ...++.+.||||||.+|...+.. ++..+| .++.+++|
T Consensus 127 ~l~~~l~~v~~~-~~~~v~lvG~s~GG~~a~~~aa~----~~~~~v~~lvl~~~~ 176 (994)
T PRK07868 127 ALSEAIDTVKDV-TGRDVHLVGYSQGGMFCYQAAAY----RRSKDIASIVTFGSP 176 (994)
T ss_pred HHHHHHHHHHHh-hCCceEEEEEChhHHHHHHHHHh----cCCCccceEEEEecc
Confidence 444444443332 23479999999999999776653 122344 45666666
No 141
>PF03283 PAE: Pectinacetylesterase
Probab=84.85 E-value=1.7 Score=41.70 Aligned_cols=107 Identities=18% Similarity=0.245 Sum_probs=64.5
Q ss_pred HHHHHHHHHH-cC-CcEEEEeccChhHHHHHHHHHHhhhhcC-CcceEEEEecCCcc------cChhHHHHHhhcCC-CE
Q 023160 86 INAVERAKDF-YG-DLNIMVTGHSMGGAMAAFCGLDLTVNLG-IQNVQVMTFGQPRI------GNAAFASYYTQLVP-NT 155 (286)
Q Consensus 86 ~~~l~~~~~~-~~-~~~I~vTGHSLGGAlA~L~a~~l~~~~~-~~~v~~~TFG~Prv------Gn~~fa~~~~~~~~-~~ 155 (286)
...|+.++.+ .+ -.+|+++|-|.||-=|.+-+-+++..++ ..+|+++.=+..-+ |...+...+...+. ..
T Consensus 141 ~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~ 220 (361)
T PF03283_consen 141 RAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQN 220 (361)
T ss_pred HHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHH
Confidence 3344445444 33 4589999999999888887878877776 45666665544433 45555555543321 11
Q ss_pred EEEEECCCcccccCCCCCCCCCCCeeecCeeEEEccCC
Q 023160 156 FRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIG 193 (286)
Q Consensus 156 ~riv~~~DiVP~lP~~~~~~~~~~y~H~g~ev~~~~~~ 193 (286)
.+.....+-+...++. .+||..-|.|..+.+++-+..
T Consensus 221 ~~~~~p~~C~~~~~~~-C~f~q~~~~~I~tPlFivns~ 257 (361)
T PF03283_consen 221 WSKSLPESCVAQYDPE-CFFPQYLYPYIKTPLFIVNSL 257 (361)
T ss_pred hhccCCHhHHhccCcc-ccchHHHHhhcCcceeeehhh
Confidence 2222233333344444 566666788999999987654
No 142
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=84.22 E-value=2 Score=38.36 Aligned_cols=38 Identities=18% Similarity=0.227 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHcCC-cEEEEeccChhHHHHHHHHHHh
Q 023160 83 PAIINAVERAKDFYGD-LNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~-~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.++.+-+.-+++.+++ ..|.|-|||.|+-||.-+-+++
T Consensus 119 ~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~ 157 (270)
T KOG4627|consen 119 TQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQ 157 (270)
T ss_pred HHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHh
Confidence 3455666677788874 5688999999999988776653
No 143
>PRK04940 hypothetical protein; Provisional
Probab=83.68 E-value=1.7 Score=37.60 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=18.5
Q ss_pred cEEEEeccChhHHHHHHHHHHh
Q 023160 99 LNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 99 ~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.++.++|+||||--|+.+|-..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~ 81 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC 81 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH
Confidence 4689999999999999877653
No 144
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=83.36 E-value=1.2 Score=43.22 Aligned_cols=32 Identities=25% Similarity=0.435 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHH
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMA 113 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA 113 (286)
..++.+.|+.++++||..+++.+|-||||+|-
T Consensus 181 t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL 212 (409)
T KOG1838|consen 181 TEDLREVVNHIKKRYPQAPLFAVGFSMGGNIL 212 (409)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEecchHHHH
Confidence 46888889999999999999999999999753
No 145
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=82.45 E-value=3.9 Score=35.96 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=23.4
Q ss_pred HHHHcCC---cEEEEeccChhHHHHHHHHHHh
Q 023160 92 AKDFYGD---LNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 92 ~~~~~~~---~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.++++|. .+|-|.|.|.||-+|.++|..+
T Consensus 12 ~L~~~p~v~~~~Igi~G~SkGaelALllAs~~ 43 (213)
T PF08840_consen 12 WLKSHPEVDPDKIGIIGISKGAELALLLASRF 43 (213)
T ss_dssp HHHCSTTB--SSEEEEEETHHHHHHHHHHHHS
T ss_pred HHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC
Confidence 3445564 4799999999999999999875
No 146
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=82.27 E-value=1.6 Score=45.97 Aligned_cols=24 Identities=21% Similarity=0.270 Sum_probs=21.0
Q ss_pred cCCcEEEEeccChhHHHHHHHHHH
Q 023160 96 YGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 96 ~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
++..++.+.||||||-++..++..
T Consensus 552 ~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 552 IDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CCCCcEEEEecCHHHHHHHHHHHh
Confidence 567899999999999999988764
No 147
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=82.27 E-value=2.6 Score=42.42 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHH-cCCcEEEEeccChhHHHHHHHHHH
Q 023160 82 RPAIINAVERAKDF-YGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 82 ~~~~~~~l~~~~~~-~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
...+.+.|+.+.++ ..+-+|.++|||+||.+|.++|..
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~ 117 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVL 117 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhcc
Confidence 34556666655443 235689999999999999888764
No 148
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=81.96 E-value=9.4 Score=36.28 Aligned_cols=62 Identities=19% Similarity=0.097 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHc-CCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHH
Q 023160 81 IRPAIINAVERAKDFY-GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYY 148 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~-~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~ 148 (286)
+...|.++..-+++-| |+-+|+..|.|-|+-.|-.+|..+. .|-++.=+.|-.-+.+++-|-
T Consensus 103 L~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagmir------~vGlls~~~~~~~d~Aw~~y~ 165 (423)
T COG3673 103 LVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGMIR------HVGLLSRKHAARIDEAWAHYR 165 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHHHH------HhhhhccccHHHHHHHHHHHH
Confidence 3445555555555544 7889999999999998887776653 223344444444444444443
No 149
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.78 E-value=1 Score=41.62 Aligned_cols=37 Identities=30% Similarity=0.266 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHcC--CcEEEEeccChhHHHHHHHHH
Q 023160 82 RPAIINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGL 118 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L~a~ 118 (286)
...+..+++-+....+ ..+|-+||-|.||+||..++.
T Consensus 157 ~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaa 195 (321)
T COG3458 157 FLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAA 195 (321)
T ss_pred hHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhh
Confidence 3455555555544333 679999999999999988775
No 150
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=80.93 E-value=1.6 Score=43.09 Aligned_cols=32 Identities=22% Similarity=0.471 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHcCCcEEEEeccChhHHHHHHH
Q 023160 85 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFC 116 (286)
Q Consensus 85 ~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~ 116 (286)
+...|+...+.+++.+|++.+|||||-+-...
T Consensus 168 LK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 168 LKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 33444445567778999999999999775443
No 151
>COG3150 Predicted esterase [General function prediction only]
Probab=79.85 E-value=3 Score=35.96 Aligned_cols=63 Identities=19% Similarity=0.345 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHhhc
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQL 151 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~~~ 151 (286)
..++++.|.++.+++++-.+.++|=||||-.|+-++... .++.+.|...---.+.++.++++.
T Consensus 42 p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~-------Girav~~NPav~P~e~l~gylg~~ 104 (191)
T COG3150 42 PQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLC-------GIRAVVFNPAVRPYELLTGYLGRP 104 (191)
T ss_pred HHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHh-------CChhhhcCCCcCchhhhhhhcCCC
Confidence 346667777777777777799999999999998777543 233445544333455566666553
No 152
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=79.47 E-value=2.3 Score=36.86 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHc--CCcEEEEeccChhHHHHHHHHHH
Q 023160 83 PAIINAVERAKDFY--GDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 83 ~~~~~~l~~~~~~~--~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
..+...++.+++.. ...+|-++|.|+||.+|..++..
T Consensus 80 ~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~ 118 (218)
T PF01738_consen 80 ADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAAR 118 (218)
T ss_dssp HHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhh
Confidence 34444455444432 25799999999999999887754
No 153
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=78.25 E-value=6.1 Score=33.62 Aligned_cols=20 Identities=25% Similarity=0.195 Sum_probs=14.9
Q ss_pred CcEEEEeccChhHHHHHHHH
Q 023160 98 DLNIMVTGHSMGGAMAAFCG 117 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a 117 (286)
+..++++|||||...+.-.+
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHH
T ss_pred CCCeEEEEeCHHHHHHHHHH
Confidence 44599999999987665444
No 154
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=77.08 E-value=2.9 Score=38.20 Aligned_cols=39 Identities=18% Similarity=0.207 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHHHHc-CCcEEEEeccChhHHHHHHHHHH
Q 023160 81 IRPAIINAVERAKDFY-GDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~-~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
..+.+..+.+.+++.+ +..+|++.|||+|.+.+.-+|.+
T Consensus 111 ~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr 150 (258)
T KOG1552|consen 111 LYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASR 150 (258)
T ss_pred chhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhc
Confidence 3456777777788888 58899999999999985544443
No 155
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=76.38 E-value=1.3 Score=40.09 Aligned_cols=52 Identities=21% Similarity=0.231 Sum_probs=34.6
Q ss_pred CceEehhhHHHhhhhchHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHH
Q 023160 65 DAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCG 117 (286)
Q Consensus 65 ~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a 117 (286)
...+-+|+.-.|.. ..+.++-.+|..+++.-|...++++|||+||-+--|++
T Consensus 72 ~p~~~~~~~~~~~D-wA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 72 RPASLSGSQWRYLD-WARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred CccccccCccchhh-hhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc
Confidence 34455555555542 33455666666666666888999999999997665554
No 156
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=75.01 E-value=4.3 Score=37.97 Aligned_cols=38 Identities=29% Similarity=0.351 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcC--CcEEEEeccChhHHHHHHHHHHhhh
Q 023160 85 IINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 85 ~~~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
|.+.+..+..+|. ..+|+|||-|-||.||..++.+...
T Consensus 128 lr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~ 167 (312)
T COG3509 128 LRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD 167 (312)
T ss_pred HHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc
Confidence 4455566677776 4599999999999999988876543
No 157
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=74.26 E-value=4 Score=39.78 Aligned_cols=26 Identities=31% Similarity=0.537 Sum_probs=21.2
Q ss_pred cEEEEeccChhHHHHHHHHHHhhhhc
Q 023160 99 LNIMVTGHSMGGAMAAFCGLDLTVNL 124 (286)
Q Consensus 99 ~~I~vTGHSLGGAlA~L~a~~l~~~~ 124 (286)
.+..|.|+||||-.|..+++.....+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~F 313 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERF 313 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccc
Confidence 46789999999999999998754444
No 158
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=73.46 E-value=4.7 Score=39.20 Aligned_cols=35 Identities=34% Similarity=0.535 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHcC----CcEEEEeccChhHHHHHHHHH
Q 023160 84 AIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGL 118 (286)
Q Consensus 84 ~~~~~l~~~~~~~~----~~~I~vTGHSLGGAlA~L~a~ 118 (286)
.++++|..+++.+| +.+++..|||-||-||.|+|-
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k 203 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAK 203 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHh
Confidence 45566666666554 368999999999999999884
No 159
>COG0400 Predicted esterase [General function prediction only]
Probab=73.40 E-value=6.7 Score=34.67 Aligned_cols=40 Identities=28% Similarity=0.408 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHcC--CcEEEEeccChhHHHHHHHHHHhhh
Q 023160 83 PAIINAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
..+.+.|+.+.++++ ..++++.|+|-||++|.-+.+....
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~ 122 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG 122 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCch
Confidence 455666777777775 4799999999999999887766543
No 160
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.12 E-value=9.8 Score=34.97 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=27.3
Q ss_pred chHHHHHHHHHHHHHHcC-CcEEEEeccChhHHHHHHH
Q 023160 80 TIRPAIINAVERAKDFYG-DLNIMVTGHSMGGAMAAFC 116 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~-~~~I~vTGHSLGGAlA~L~ 116 (286)
++.+|+...|.-+++--| +.+|++.|||-|+-+-.-.
T Consensus 90 sL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqi 127 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQI 127 (301)
T ss_pred chhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHH
Confidence 456788877765554445 8899999999999875433
No 161
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=71.93 E-value=4.3 Score=41.57 Aligned_cols=38 Identities=29% Similarity=0.267 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHcC---CcEEEEeccChhHHHHHHHHHHh
Q 023160 82 RPAIINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~---~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.+++.+.++ +++++| ..+|-|+|||-||-|+.+++...
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~ 494 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKT 494 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcC
Confidence 456777777 667777 35799999999999998887653
No 162
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=70.69 E-value=1.5 Score=41.47 Aligned_cols=20 Identities=35% Similarity=0.463 Sum_probs=16.2
Q ss_pred cEEEEeccChhHHHHHHHHH
Q 023160 99 LNIMVTGHSMGGAMAAFCGL 118 (286)
Q Consensus 99 ~~I~vTGHSLGGAlA~L~a~ 118 (286)
.++.|.|||.|||.+.....
T Consensus 241 s~~aViGHSFGgAT~i~~ss 260 (399)
T KOG3847|consen 241 SQAAVIGHSFGGATSIASSS 260 (399)
T ss_pred hhhhheeccccchhhhhhhc
Confidence 57899999999998765543
No 163
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=70.38 E-value=12 Score=32.81 Aligned_cols=56 Identities=16% Similarity=0.275 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCC
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQP 137 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~P 137 (286)
....+.+.+....++.+..++++.|.|.|+-+.-.+.-.|..... .+|..+..=+|
T Consensus 50 ~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r-~~v~~v~Ll~p 105 (192)
T PF06057_consen 50 TAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALR-ARVAQVVLLSP 105 (192)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHH-hheeEEEEecc
Confidence 344555666666677778999999999999887776666654433 34444433333
No 164
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=70.19 E-value=6.7 Score=38.40 Aligned_cols=43 Identities=23% Similarity=0.359 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhh
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVN 123 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~ 123 (286)
+...+.++|..+++.-+..+|-+.||+.||-++..+.+.++..
T Consensus 163 i~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 163 ILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred HHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc
Confidence 3456677777777766778999999999999877666666543
No 165
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=69.15 E-value=12 Score=41.08 Aligned_cols=27 Identities=22% Similarity=0.188 Sum_probs=22.5
Q ss_pred cCCcEEEEeccChhHHHHHHHHHHhhh
Q 023160 96 YGDLNIMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 96 ~~~~~I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
.+..++.+.|||+||.+|.-.|..+..
T Consensus 1130 ~~~~p~~l~G~S~Gg~vA~e~A~~l~~ 1156 (1296)
T PRK10252 1130 QPHGPYHLLGYSLGGTLAQGIAARLRA 1156 (1296)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHHH
Confidence 355679999999999999998887754
No 166
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=68.41 E-value=25 Score=32.87 Aligned_cols=61 Identities=23% Similarity=0.161 Sum_probs=35.6
Q ss_pred HHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHhhcC
Q 023160 92 AKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLV 152 (286)
Q Consensus 92 ~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~~~~ 152 (286)
..+.++..+|++.||+.|++++.-...+.....+..-|-+=.|-.++.-|..+.+.+.++-
T Consensus 186 ~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n~~l~~~la~l~ 246 (310)
T PF12048_consen 186 FAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRNPALAEQLAQLK 246 (310)
T ss_pred HHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhhhhHHHHhhccC
Confidence 4556788889999999999987654433221111111222233334445677777777654
No 167
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=67.47 E-value=8.6 Score=35.34 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=24.6
Q ss_pred EEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 100 NIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 100 ~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
+-.+.||||||-+...+-+.- ......|--.+|..
T Consensus 138 ~~~i~GhSlGGLfvl~aLL~~-----p~~F~~y~~~SPSl 172 (264)
T COG2819 138 RTAIIGHSLGGLFVLFALLTY-----PDCFGRYGLISPSL 172 (264)
T ss_pred cceeeeecchhHHHHHHHhcC-----cchhceeeeecchh
Confidence 488999999998876655431 13446677788865
No 168
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=65.05 E-value=8.5 Score=34.45 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHcC---CcEEEEeccChhHHHHHHHHHH
Q 023160 83 PAIINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~---~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
..+...+..+. +.| ..+|.++|.|+||.+|.+++..
T Consensus 94 ~d~~a~~~~L~-~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 94 ADIDAALDYLA-RQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHHHHHH-hCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 34444444443 334 5689999999999999998865
No 169
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=63.98 E-value=25 Score=33.24 Aligned_cols=63 Identities=11% Similarity=0.121 Sum_probs=48.3
Q ss_pred chHHHHHHHHHHHHHHcC---CcEEEEeccChhHHHHHHHHHHhhhhcC-----CcceEEEEecCCcccCh
Q 023160 80 TIRPAIINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLDLTVNLG-----IQNVQVMTFGQPRIGNA 142 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~---~~~I~vTGHSLGGAlA~L~a~~l~~~~~-----~~~v~~~TFG~PrvGn~ 142 (286)
...+.+.+.|+...+++| ..+++|+|-|-||-.+..+|.+|..... .-+++-+..|.|-+...
T Consensus 114 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 114 QAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred HHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccccc
Confidence 356778888888888887 4589999999999988777777766532 45678899999988543
No 170
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=63.82 E-value=15 Score=35.85 Aligned_cols=38 Identities=13% Similarity=-0.019 Sum_probs=27.9
Q ss_pred EEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCCc
Q 023160 101 IMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPR 138 (286)
Q Consensus 101 I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~Pr 138 (286)
+.+.|.++||-++..++..++.......+ .++.+|+|-
T Consensus 170 v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PI 208 (406)
T TIGR01849 170 IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPI 208 (406)
T ss_pred CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCc
Confidence 99999999999998888877665322235 456678864
No 171
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=61.76 E-value=2.1 Score=38.50 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=19.5
Q ss_pred CcEEEEeccChhHHHHHHHHHHh
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
..+|++-|-|||||+|..+|.+-
T Consensus 148 ktkivlfGrSlGGAvai~lask~ 170 (300)
T KOG4391|consen 148 KTKIVLFGRSLGGAVAIHLASKN 170 (300)
T ss_pred cceEEEEecccCCeeEEEeeccc
Confidence 57899999999999998777653
No 172
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=61.37 E-value=17 Score=34.41 Aligned_cols=52 Identities=17% Similarity=0.174 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
.+...+..++...+..++.+.||++||-+|--+++..... .-..++-..|..
T Consensus 98 ~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Per----v~~lv~~nv~~~ 149 (322)
T KOG4178|consen 98 ELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPER----VDGLVTLNVPFP 149 (322)
T ss_pred HHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhh----cceEEEecCCCC
Confidence 4445555556666788999999999999998888765432 224455554444
No 173
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=60.77 E-value=9.7 Score=34.90 Aligned_cols=22 Identities=32% Similarity=0.484 Sum_probs=19.7
Q ss_pred EEEEeccChhHHHHHHHHHHhh
Q 023160 100 NIMVTGHSMGGAMAAFCGLDLT 121 (286)
Q Consensus 100 ~I~vTGHSLGGAlA~L~a~~l~ 121 (286)
+|-+.|||-||-+|..+++..+
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhc
Confidence 7999999999999998888764
No 174
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=60.34 E-value=15 Score=32.44 Aligned_cols=25 Identities=32% Similarity=0.478 Sum_probs=21.5
Q ss_pred CCcEEEEeccChhHHHHHHHHHHhh
Q 023160 97 GDLNIMVTGHSMGGAMAAFCGLDLT 121 (286)
Q Consensus 97 ~~~~I~vTGHSLGGAlA~L~a~~l~ 121 (286)
+..+|.+-|-|+|||+|..+++.+.
T Consensus 91 ~~~rI~igGfs~G~a~aL~~~~~~~ 115 (206)
T KOG2112|consen 91 PSNRIGIGGFSQGGALALYSALTYP 115 (206)
T ss_pred CccceeEcccCchHHHHHHHHhccc
Confidence 3568999999999999999998763
No 175
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=60.14 E-value=14 Score=36.28 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=22.6
Q ss_pred HHHHHHHHHcC--CcEEEEeccChhHHHHHHHHHH
Q 023160 87 NAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 87 ~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
+.|++-.+.++ ..+|.+.|||-||.++.++.+.
T Consensus 162 ~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 162 KWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred HHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC
Confidence 33444344443 4589999999999988776654
No 176
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=59.97 E-value=28 Score=30.51 Aligned_cols=46 Identities=15% Similarity=0.179 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHH----HHHHHHHhhhhcCC
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAM----AAFCGLDLTVNLGI 126 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAl----A~L~a~~l~~~~~~ 126 (286)
+.+.+++.|++..++......++.=|||||+. +.+++-.++..++.
T Consensus 106 ~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~ 155 (216)
T PF00091_consen 106 ALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPK 155 (216)
T ss_dssp HHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTT
T ss_pred cccccccccchhhccccccccceecccccceeccccccccchhhhccccc
Confidence 45666777777776667888899999999964 44444455555543
No 177
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.
Probab=59.30 E-value=44 Score=25.42 Aligned_cols=55 Identities=16% Similarity=0.289 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccC--hhHH---------HHHHHHHHhhhh-cCCcceEEEEecCCc
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHS--MGGA---------MAAFCGLDLTVN-LGIQNVQVMTFGQPR 138 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHS--LGGA---------lA~L~a~~l~~~-~~~~~v~~~TFG~Pr 138 (286)
..+..+...++++|+++|.|.||+ .|.. =|....-.|... .+..++.+..||.-+
T Consensus 17 ~~L~~~a~~l~~~~~~~i~I~Ghtd~~g~~~~N~~LS~~RA~~V~~~L~~~gi~~~ri~~~g~G~~~ 83 (104)
T TIGR02802 17 AILDAHAAYLKKNPSVRVTIEGHTDERGTREYNLALGERRANAVKDYLQAKGVSASQIETVSYGEEK 83 (104)
T ss_pred HHHHHHHHHHHHCCCcEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHeEEEeecccC
Confidence 445556677788999999999998 3332 122222222211 134567788888644
No 178
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=58.35 E-value=24 Score=36.14 Aligned_cols=69 Identities=30% Similarity=0.394 Sum_probs=39.1
Q ss_pred eEEEEEcCCCCCChhHHHhhccccccccCCCCCCCceEehhhHHHhhhhchHHHHHHHHHHHHHHcC-CcEEEEeccChh
Q 023160 31 AIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYG-DLNIMVTGHSMG 109 (286)
Q Consensus 31 ~ivVafRGT~~~s~~dwl~Dl~~~~~~~~~p~~~~~~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~~-~~~I~vTGHSLG 109 (286)
.-||+.+-|. ++.||-. ...+..|++-+.+=. ..+++.|+.+. -+ +..|+..|||||
T Consensus 479 ~Rii~l~Y~T--sit~w~~-------------~~p~e~~r~sl~~Rs-----~~lleql~~~~--VG~~RPivwI~HSmG 536 (697)
T KOG2029|consen 479 SRIIGLEYTT--SITDWRA-------------RCPAEAHRRSLAARS-----NELLEQLQAAG--VGDDRPIVWIGHSMG 536 (697)
T ss_pred ceEEEeeccc--chhhhcc-------------cCcccchhhHHHHHH-----HHHHHHHHHhc--cCCCCceEEEecccc
Confidence 4566777665 5666643 112445555443322 13344333222 13 678999999999
Q ss_pred HHHHHHHHHHhh
Q 023160 110 GAMAAFCGLDLT 121 (286)
Q Consensus 110 GAlA~L~a~~l~ 121 (286)
|-+|-..-++..
T Consensus 537 GLl~K~lLlda~ 548 (697)
T KOG2029|consen 537 GLLAKKLLLDAY 548 (697)
T ss_pred hHHHHHHHHHHh
Confidence 988876665543
No 179
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=58.15 E-value=32 Score=31.89 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=22.8
Q ss_pred EEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCCcccC
Q 023160 100 NIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQPRIGN 141 (286)
Q Consensus 100 ~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~PrvGn 141 (286)
-+.+.|+|.||-++--.. +..+..+| .++|||+|-.|-
T Consensus 81 G~~~IGfSQGgl~lRa~v----q~c~~~~V~nlISlggph~Gv 119 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYV----QRCNDPPVHNLISLGGPHMGV 119 (279)
T ss_dssp -EEEEEETCHHHHHHHHH----HH-TSS-EEEEEEES--TT-B
T ss_pred ceeeeeeccccHHHHHHH----HHCCCCCceeEEEecCccccc
Confidence 589999999997654332 23333444 799999998864
No 180
>COG0627 Predicted esterase [General function prediction only]
Probab=57.40 E-value=8.6 Score=36.24 Aligned_cols=21 Identities=38% Similarity=0.431 Sum_probs=18.1
Q ss_pred EEEEeccChhHHHHHHHHHHh
Q 023160 100 NIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 100 ~I~vTGHSLGGAlA~L~a~~l 120 (286)
+.-|+||||||-=|..+|+.-
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~ 173 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKH 173 (316)
T ss_pred CceeEEEeccchhhhhhhhhC
Confidence 689999999999988877764
No 181
>PLN02633 palmitoyl protein thioesterase family protein
Probab=56.93 E-value=26 Score=32.99 Aligned_cols=40 Identities=18% Similarity=0.143 Sum_probs=27.2
Q ss_pred EEEEeccChhHHHHHHHHHHhhhhcCC-cce-EEEEecCCcccChh
Q 023160 100 NIMVTGHSMGGAMAAFCGLDLTVNLGI-QNV-QVMTFGQPRIGNAA 143 (286)
Q Consensus 100 ~I~vTGHSLGGAlA~L~a~~l~~~~~~-~~v-~~~TFG~PrvGn~~ 143 (286)
-+.+.|||.||-++--.. +..+. .+| ..+|||+|-.|-..
T Consensus 95 G~naIGfSQGGlflRa~i----erc~~~p~V~nlISlggph~Gv~g 136 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLI----EFCDGGPPVYNYISLAGPHAGISS 136 (314)
T ss_pred cEEEEEEccchHHHHHHH----HHCCCCCCcceEEEecCCCCCeeC
Confidence 488999999997754333 23333 344 79999999876443
No 182
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=54.17 E-value=1.1e+02 Score=28.60 Aligned_cols=83 Identities=14% Similarity=0.081 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHcC---CcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHhhcC-------
Q 023160 83 PAIINAVERAKDFYG---DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLV------- 152 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~---~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~~~~------- 152 (286)
..++++|.......| --+|++.|-|||+--+.-+ ........ ..+.-.-|-.|+-.|..+.+..++.-
T Consensus 90 ~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~a-f~~~~~~~-~~vdGalw~GpP~~s~~w~~~t~~RdpGSpe~~ 167 (289)
T PF10081_consen 90 RALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAA-FDGLDDLR-DRVDGALWVGPPFFSPLWRELTDRRDPGSPEWL 167 (289)
T ss_pred HHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhh-hccHHHhh-hhcceEEEeCCCCCChhHHHhccCCCCCCCccc
Confidence 345566655555555 3589999999987443332 22222221 34666677777778888888776432
Q ss_pred -----CCEEEEEECCCcccc
Q 023160 153 -----PNTFRVTNYHDIVPH 167 (286)
Q Consensus 153 -----~~~~riv~~~DiVP~ 167 (286)
+..+|+.+..+-..+
T Consensus 168 Pv~~~G~~VRFa~~~~~l~~ 187 (289)
T PF10081_consen 168 PVYDDGRHVRFANDPADLAR 187 (289)
T ss_pred ceecCCceEEEeCCcccccC
Confidence 257888877665555
No 183
>PRK10802 peptidoglycan-associated outer membrane lipoprotein; Provisional
Probab=54.07 E-value=47 Score=28.34 Aligned_cols=57 Identities=14% Similarity=0.296 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccC-----------hhHHHHHHHHHHhhhh-cCCcceEEEEecCCcc
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHS-----------MGGAMAAFCGLDLTVN-LGIQNVQVMTFGQPRI 139 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHS-----------LGGAlA~L~a~~l~~~-~~~~~v~~~TFG~Prv 139 (286)
.++++.+...++++|..+|.|.||. |+-.-|.-..-+|... .+..++.++.||.=+.
T Consensus 85 ~~~L~~~a~~L~~~p~~~v~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gv~~~ri~~~g~Ge~~P 153 (173)
T PRK10802 85 AQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKEKP 153 (173)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEecCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHeEEEEecCCCc
Confidence 4556667777888999999999997 4444444444444322 2346788999996443
No 184
>PLN02606 palmitoyl-protein thioesterase
Probab=53.34 E-value=33 Score=32.27 Aligned_cols=40 Identities=23% Similarity=0.174 Sum_probs=27.4
Q ss_pred EEEEeccChhHHHHHHHHHHhhhhcCC-cce-EEEEecCCcccChh
Q 023160 100 NIMVTGHSMGGAMAAFCGLDLTVNLGI-QNV-QVMTFGQPRIGNAA 143 (286)
Q Consensus 100 ~I~vTGHSLGGAlA~L~a~~l~~~~~~-~~v-~~~TFG~PrvGn~~ 143 (286)
-+.+.|+|.||-++--.. +..+. .+| ..+|||+|-.|-..
T Consensus 96 G~naIGfSQGglflRa~i----erc~~~p~V~nlISlggph~Gv~g 137 (306)
T PLN02606 96 GYNIVAESQGNLVARGLI----EFCDNAPPVINYVSLGGPHAGVAA 137 (306)
T ss_pred ceEEEEEcchhHHHHHHH----HHCCCCCCcceEEEecCCcCCccc
Confidence 488999999997654332 23333 334 79999999887554
No 185
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=53.04 E-value=26 Score=33.96 Aligned_cols=61 Identities=23% Similarity=0.279 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHc---CCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccChhHHHHHh
Q 023160 85 IINAVERAKDFY---GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYT 149 (286)
Q Consensus 85 ~~~~l~~~~~~~---~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~~fa~~~~ 149 (286)
+...++.++.++ ++.++++.|=|-||+||+.+-+ ++|.--.-.+.-.+|-.--..|.+|++
T Consensus 96 ~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~----kyP~~~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 96 LAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRL----KYPHLFDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp HHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHH----H-TTT-SEEEEET--CCHCCTTTHHHH
T ss_pred HHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHh----hCCCeeEEEEeccceeeeecccHHHHH
Confidence 333444444444 4679999999999999976544 455444466666666654444444443
No 186
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=51.92 E-value=12 Score=36.20 Aligned_cols=26 Identities=27% Similarity=0.146 Sum_probs=20.2
Q ss_pred HHHcC---CcEEEEeccChhHHHHHHHHH
Q 023160 93 KDFYG---DLNIMVTGHSMGGAMAAFCGL 118 (286)
Q Consensus 93 ~~~~~---~~~I~vTGHSLGGAlA~L~a~ 118 (286)
++..| ..+|-++|+||||..|-++|+
T Consensus 217 L~slpeVD~~RIG~~GfSmGg~~a~~LaA 245 (390)
T PF12715_consen 217 LASLPEVDPDRIGCMGFSMGGYRAWWLAA 245 (390)
T ss_dssp HCT-TTEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred HhcCcccCccceEEEeecccHHHHHHHHH
Confidence 44445 468999999999999887765
No 187
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=48.45 E-value=39 Score=33.34 Aligned_cols=48 Identities=13% Similarity=0.173 Sum_probs=36.1
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcCCc
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGIQ 127 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~~~ 127 (286)
.+.+++++.|++..++.....-++.=||||| ++++++.-.|...++..
T Consensus 107 ~~~~~~~d~ir~~~E~cd~~~gf~~~~sl~GGtGSG~gs~l~e~l~d~y~~~ 158 (446)
T cd02189 107 QIKEDILDLIRKEVEKCDSFEGFLVLHSLAGGTGSGLGSRVTELLRDEYPES 158 (446)
T ss_pred hhHHHHHHHHHHHHHhCCCccceEEEecCCCCcchHHHHHHHHHHHHhcCcc
Confidence 4678888888888888877777888899998 46666666666666543
No 188
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=48.22 E-value=48 Score=32.04 Aligned_cols=39 Identities=23% Similarity=0.290 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhh
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
++.+..+.+.++.+..+|++.|=|.||-||.-...+|+.
T Consensus 180 qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 180 QLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred HHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhh
Confidence 445555667756678899999999999998877777765
No 189
>PHA02637 TNF-alpha-receptor-like protein; Provisional
Probab=48.07 E-value=73 Score=26.04 Aligned_cols=103 Identities=19% Similarity=0.358 Sum_probs=59.9
Q ss_pred EEEEECCCcccccCCCCCCCCCCCeeecCeeEEEccCCCCccccceeeecCCCCCCCCCcCCCCCCcccCcccccceeeC
Q 023160 156 FRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCSRSVTGNSVSDHLVYFGVRMG 235 (286)
Q Consensus 156 ~riv~~~DiVP~lP~~~~~~~~~~y~H~g~ev~~~~~~~g~~~y~~~~~C~~~~ed~~Cs~~~~~~si~dH~~Yfg~~~~ 235 (286)
.-|++++||+|+.|....= ....|.+ +.+- -..=..|.- ..+.|... .+..|...-.+ ...+|.+|+-.=+.
T Consensus 14 ~~~~~g~~~~Py~~~~~~C-~e~EY~~-~~~C-C~kCPPGt~---v~~~Ct~~-t~T~C~PCp~G-TYTe~~N~~~~C~~ 85 (127)
T PHA02637 14 CIIINGRDIAPHAPSDGKC-KDNEYKR-HNLC-CLSCPPGTY---ASRLCDIK-TNTQCTPCGSG-TFTSHNNHLPACLS 85 (127)
T ss_pred eEEecCCCCCCCCCCCCCC-CCCcCcC-CCeE-cCCCCCCCE---EeCcCCCC-CCcccccCCCC-CeeccCCCCCcccc
Confidence 4578999999999975210 0112432 2221 111112432 23677753 56778765444 36778887754444
Q ss_pred CcCccCCccccccccchhcccccCCceEEcCC-Ccc
Q 023160 236 CNEWTPCRIVMDPRVAEYGKTDLKGNFILSRP-PAA 270 (286)
Q Consensus 236 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 270 (286)
+ .+.|.-.++-.++.-+ -+...|++||+ |+.
T Consensus 86 C--~~~Cd~~~gl~v~~~n--a~~~~~~~~~~~~~~ 117 (127)
T PHA02637 86 C--NGRCDRVTRLTIESVN--ALEAIIVFSKDHPDA 117 (127)
T ss_pred c--CCccCcccCceeEecc--ceeEEEEeccCCCcc
Confidence 4 2468888887777653 35667999998 753
No 190
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=47.77 E-value=19 Score=34.67 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHH------HcCCcEEEEeccChhHHHHHH
Q 023160 83 PAIINAVERAKD------FYGDLNIMVTGHSMGGAMAAF 115 (286)
Q Consensus 83 ~~~~~~l~~~~~------~~~~~~I~vTGHSLGGAlA~L 115 (286)
..++..|++..+ +-.-.+|.+.|||+||.-|..
T Consensus 137 s~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~ 175 (365)
T COG4188 137 SALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAME 175 (365)
T ss_pred HHHHHHHHHhhcCcccccccCccceEEEecccccHHHHH
Confidence 455565655511 112579999999999976553
No 191
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=47.63 E-value=13 Score=34.51 Aligned_cols=24 Identities=29% Similarity=0.375 Sum_probs=19.8
Q ss_pred CcEEEEeccChhHHHHHHHHHHhh
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLT 121 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~ 121 (286)
-.++.+.|||.||-.|--+|+..+
T Consensus 119 l~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred cceEEEeecCCccHHHHHHHhccc
Confidence 358999999999988887777654
No 192
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=47.56 E-value=71 Score=27.22 Aligned_cols=61 Identities=18% Similarity=0.217 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccC-----------hhHHHHHHHHHHhhhhc-CCcceEEEEec--CCcccChh
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHS-----------MGGAMAAFCGLDLTVNL-GIQNVQVMTFG--QPRIGNAA 143 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHS-----------LGGAlA~L~a~~l~~~~-~~~~v~~~TFG--~PrvGn~~ 143 (286)
.+.++.+.+.++++|..+|.|.||. |+---|.-.+-+|...- ...++.+..|| .|.+.|..
T Consensus 99 ~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~~i~~~G~G~~~Pia~n~t 173 (190)
T COG2885 99 QATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVADRISTVGYGEEKPIASNAT 173 (190)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcccEEEEEcCcCCCCCCCCC
Confidence 3556667778889999999999993 44433444444444432 23478888998 46555444
No 193
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=46.17 E-value=30 Score=34.47 Aligned_cols=21 Identities=33% Similarity=0.476 Sum_probs=18.2
Q ss_pred CcEEEEeccChhHHHHHHHHH
Q 023160 98 DLNIMVTGHSMGGAMAAFCGL 118 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~ 118 (286)
..+|.+.|||-||+.+.++.+
T Consensus 194 p~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 194 PKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred CCeEEEEeechhHHHHHHHhc
Confidence 468999999999999987665
No 194
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=45.91 E-value=39 Score=30.94 Aligned_cols=41 Identities=22% Similarity=0.123 Sum_probs=31.5
Q ss_pred chHHHHHHHHHHHHHHc-CCcEEEEeccChhHHHHHHHHHHh
Q 023160 80 TIRPAIINAVERAKDFY-GDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~-~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
.+...+..+.+.+.+.| |+.+|++.|.|-||+.|-.++-.+
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 35567777777765555 688999999999999998777655
No 195
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=45.52 E-value=33 Score=33.54 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=22.3
Q ss_pred HHHHHHHHHcC--CcEEEEeccChhHHHHHHHHHH
Q 023160 87 NAVERAKDFYG--DLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 87 ~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
+-|++-.+..+ ..+|.+.|||-||+.+.+..+.
T Consensus 194 ~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s 228 (535)
T PF00135_consen 194 KWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS 228 (535)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG
T ss_pred HHHHhhhhhcccCCcceeeeeecccccccceeeec
Confidence 34444444555 4589999999999877665543
No 196
>PRK03482 phosphoglycerate mutase; Provisional
Probab=45.16 E-value=48 Score=28.70 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+...+...++++.+.+++.+|+|++| ||.+..+.+..+
T Consensus 125 ~~~Rv~~~l~~~~~~~~~~~vliVsH--g~~i~~l~~~l~ 162 (215)
T PRK03482 125 LSDRMHAALESCLELPQGSRPLLVSH--GIALGCLVSTIL 162 (215)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHHHHHh
Confidence 34556666666666666678999999 688877766544
No 197
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=44.55 E-value=49 Score=30.21 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=23.1
Q ss_pred cEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecC
Q 023160 99 LNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQ 136 (286)
Q Consensus 99 ~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~ 136 (286)
..++=.|||||+-+=.|++....... ..--++.|.-
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r--~gniliSFNN 125 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVER--AGNILISFNN 125 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcc--cceEEEecCC
Confidence 46778999999999888776543221 1224556643
No 198
>PF01713 Smr: Smr domain; InterPro: IPR002625 This family includes the Smr (Small MutS Related) proteins, and the C-terminal region of the MutS2 protein. It has been suggested that this domain interacts with the MutS1 (P23909 from SWISSPROT) protein in the case of Smr proteins and with the N-terminal MutS related region of MutS2, P94545 from SWISSPROT [].; PDB: 3QD7_X 2D9I_A 3FAU_A 2VKC_A 2ZQE_A.
Probab=44.32 E-value=96 Score=22.55 Aligned_cols=60 Identities=22% Similarity=0.196 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEEec---cChhHHHHHHHHHHhhhhcCCcceEEEEecCCcccCh
Q 023160 83 PAIINAVERAKDFYGDLNIMVTG---HSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNA 142 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTG---HSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvGn~ 142 (286)
..+.+.|..+.+..-..=.+||| ||.+|.|-...--+|........+..+--+.|.-|+.
T Consensus 13 ~~l~~~l~~~~~~~~~~~~II~G~G~hS~~g~Lk~~V~~~L~~~~~~~~v~~~~~~~~~~g~~ 75 (83)
T PF01713_consen 13 RALEEFLDEARQRGIRELRIITGKGNHSKGGVLKRAVRRWLEEGYQYEEVLAYRDAEPEDGNS 75 (83)
T ss_dssp HHHHHHHHHHHHTTHSEEEEE--STCTCCTSHHHHHHHHHHHHTHCCTTEEEEEE--CCCTGG
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccCCCCCCCcHHHHHHHHHHhhhccchhheeeecCCCCCCC
Confidence 34555555554433244457777 6778887666665664433345566666677776654
No 199
>COG5023 Tubulin [Cytoskeleton]
Probab=43.36 E-value=45 Score=32.32 Aligned_cols=61 Identities=18% Similarity=0.273 Sum_probs=38.2
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhHH----HHHHHHHHhhhhcCCcceEEE-EecCCccc
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGA----MAAFCGLDLTVNLGIQNVQVM-TFGQPRIG 140 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGA----lA~L~a~~l~~~~~~~~v~~~-TFG~PrvG 140 (286)
.+.+.+++.|++........+=+..=||+||+ +++|+--.|...+|.+.+..+ .|=+|++.
T Consensus 111 e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~~S 176 (443)
T COG5023 111 EIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPKVS 176 (443)
T ss_pred HHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEeccCCccC
Confidence 45667777777665544455555556999984 667776677777765444333 33457774
No 200
>PF14353 CpXC: CpXC protein
Probab=42.65 E-value=33 Score=27.48 Aligned_cols=33 Identities=21% Similarity=0.424 Sum_probs=24.3
Q ss_pred ceeeeecCCCCCC---ccEEEEEECCCCeEEEEEcC
Q 023160 6 ELFTWTCSRCDGL---TKGFLGVAKDLNAIVIAFRG 38 (286)
Q Consensus 6 ~~~~w~C~~c~~~---~~gyV~~~~~~~~ivVafRG 38 (286)
+++.++|+.|+.. .-.++..|++.+.+++.+--
T Consensus 35 ~l~~~~CP~Cg~~~~~~~p~lY~D~~~~~~i~~~P~ 70 (128)
T PF14353_consen 35 SLFSFTCPSCGHKFRLEYPLLYHDPEKKFMIYYFPD 70 (128)
T ss_pred CcCEEECCCCCCceecCCCEEEEcCCCCEEEEEcCC
Confidence 6789999999853 34668888887766665554
No 201
>COG1909 Uncharacterized protein conserved in archaea [Function unknown]
Probab=42.24 E-value=51 Score=28.14 Aligned_cols=53 Identities=28% Similarity=0.368 Sum_probs=40.3
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCccc
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIG 140 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvG 140 (286)
.+...++++++++........|.|.|-= =||+|.+..++.. =.++.||+|..|
T Consensus 90 tIt~el~~ai~~a~~~~k~~~I~V~GEE---DLa~lp~i~~ap~-----~tvV~YGqP~~G 142 (167)
T COG1909 90 TITFELIKAIEKALEDGKRVRIFVDGEE---DLAVLPAILYAPL-----GTVVLYGQPDEG 142 (167)
T ss_pred EeEHHHHHHHHHHHhcCCcEEEEEeChh---HHHHhHHHhhcCC-----CCEEEeCCCCCc
Confidence 3556788888888877777889999864 5778877776532 157899999987
No 202
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=41.84 E-value=65 Score=26.63 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
+...+.+.++++.+++++..|+|++|. |.+..+.+..
T Consensus 120 ~~~R~~~~~~~l~~~~~~~~vlvVsHg--~~i~~l~~~~ 156 (177)
T TIGR03162 120 FYQRVSEFLEELLKAHEGDNVLIVTHG--GVIRALLAHL 156 (177)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECH--HHHHHHHHHH
Confidence 445666777777777677889999994 7777766543
No 203
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=41.31 E-value=50 Score=31.85 Aligned_cols=41 Identities=29% Similarity=0.296 Sum_probs=29.5
Q ss_pred hchHHHHHHHHHHHHHHcCCcEEE-EeccChhHHHHHHHHHHh
Q 023160 79 TTIRPAIINAVERAKDFYGDLNIM-VTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~I~-vTGHSLGGAlA~L~a~~l 120 (286)
.++++.+... +.+++..+-.+|. |+|-||||..|.--+++.
T Consensus 127 ~ti~D~V~aq-~~ll~~LGI~~l~avvGgSmGGMqaleWa~~y 168 (368)
T COG2021 127 ITIRDMVRAQ-RLLLDALGIKKLAAVVGGSMGGMQALEWAIRY 168 (368)
T ss_pred ccHHHHHHHH-HHHHHhcCcceEeeeeccChHHHHHHHHHHhC
Confidence 3456655444 5566777777777 999999999997777654
No 204
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=39.38 E-value=50 Score=30.81 Aligned_cols=45 Identities=16% Similarity=0.285 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcC
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLG 125 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~ 125 (286)
..+.+.+.|++..++......++.=||||| +++.+++-.++..++
T Consensus 71 ~~e~i~~~ir~~~E~cD~~~gf~i~~slgGGTGsG~~~~i~e~l~d~y~ 119 (328)
T cd00286 71 YQEEILDIIRKEAEECDSLQGFFITHSLGGGTGSGLGPVLAERLKDEYP 119 (328)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEeecCCCccccHHHHHHHHHHHHcC
Confidence 456777777777777667777888899988 577777777777665
No 205
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=39.18 E-value=72 Score=27.27 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+...+...++++.+.+++..|+|++| ||.+..+++..+
T Consensus 124 ~~~Rv~~~l~~l~~~~~~~~iliVsH--g~~i~~l~~~~~ 161 (199)
T PRK15004 124 FSQRVERFIARLSAFQHYQNLLIVSH--QGVLSLLIARLL 161 (199)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEcC--hHHHHHHHHHHh
Confidence 34556666777777777778999999 577777665443
No 206
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=38.61 E-value=54 Score=32.25 Aligned_cols=57 Identities=14% Similarity=0.098 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHcCC---cEEEEeccChhHHHHHHHHHHhhhhc-----CCcceEEEEecCCcc
Q 023160 83 PAIINAVERAKDFYGD---LNIMVTGHSMGGAMAAFCGLDLTVNL-----GIQNVQVMTFGQPRI 139 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~---~~I~vTGHSLGGAlA~L~a~~l~~~~-----~~~~v~~~TFG~Prv 139 (286)
+++.+.|+...+++|. .+++++|.|-||-.+-.+|..+.... +.-+++-+..|.|-+
T Consensus 146 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 146 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 4677778887777774 57999999999986666666664421 123567788888765
No 207
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=38.27 E-value=90 Score=30.63 Aligned_cols=41 Identities=20% Similarity=0.146 Sum_probs=26.5
Q ss_pred HHHHcC---CcEEEEeccChhHHHHHHHHHHhhhhcCCcce-EEEEecCC
Q 023160 92 AKDFYG---DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNV-QVMTFGQP 137 (286)
Q Consensus 92 ~~~~~~---~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v-~~~TFG~P 137 (286)
.+..-| ..+|.+.|-|+||.+|.-+|.. ...++ .|++.|+|
T Consensus 251 ~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l-----e~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 251 YLASRPWVDHTRVGAWGFSFGGYYAVRLAAL-----EDPRLKAVVALGAP 295 (411)
T ss_dssp HHHHSTTEEEEEEEEEEETHHHHHHHHHHHH-----TTTT-SEEEEES--
T ss_pred HHhcCCccChhheEEEEeccchHHHHHHHHh-----cccceeeEeeeCch
Confidence 334445 4689999999999999866642 11233 57888887
No 208
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.80 E-value=17 Score=32.61 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=15.4
Q ss_pred CcEEEEeccChhHHHHHHHH
Q 023160 98 DLNIMVTGHSMGGAMAAFCG 117 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a 117 (286)
-..|+|-|||||.+=....-
T Consensus 234 i~~I~i~GhSl~~~D~~Yf~ 253 (270)
T PF14253_consen 234 IDEIIIYGHSLGEVDYPYFE 253 (270)
T ss_pred CCEEEEEeCCCchhhHHHHH
Confidence 46899999999997555443
No 209
>PRK13463 phosphatase PhoE; Provisional
Probab=36.28 E-value=84 Score=27.03 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
+...+...++++.+++++.+|+|++| ||++-.+++..
T Consensus 126 ~~~R~~~~l~~i~~~~~~~~vlvVsH--g~~ir~~~~~~ 162 (203)
T PRK13463 126 VHKRVIEGMQLLLEKHKGESILIVSH--AAAAKLLVGHF 162 (203)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeC--hHHHHHHHHHH
Confidence 34555666666667777778999999 56766665543
No 210
>PF04019 DUF359: Protein of unknown function (DUF359); InterPro: IPR007164 This is family of archaebacterial proteins, which are about 170 amino acids in length. They have no known function. The most conserved portion of the protein contains the sequence GEEDL that may be important for its function.
Probab=35.99 E-value=95 Score=25.07 Aligned_cols=53 Identities=26% Similarity=0.388 Sum_probs=39.2
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCccc
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIG 140 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvG 140 (286)
.+..+++++|+++........|.|-|-= =||+|.+..++.. =.++-||||..|
T Consensus 45 ~It~el~~ai~~a~~~~~~~~I~V~GEE---DL~~lPail~aP~-----gs~V~YGQP~eG 97 (121)
T PF04019_consen 45 TITEELIEAIKKALESGKPVVIFVDGEE---DLAVLPAILYAPE-----GSVVLYGQPGEG 97 (121)
T ss_pred cccHHHHHHHHHHHhCCCCEEEEEeChH---HHHHHHHHHhCCC-----CCEEEECCCCCe
Confidence 4567888889888877677888998753 5677777665432 157899999986
No 211
>PLN02209 serine carboxypeptidase
Probab=35.88 E-value=66 Score=31.68 Aligned_cols=58 Identities=16% Similarity=0.075 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHcCC---cEEEEeccChhHHHHHHHHHHhhhhc-----CCcceEEEEecCCcc
Q 023160 82 RPAIINAVERAKDFYGD---LNIMVTGHSMGGAMAAFCGLDLTVNL-----GIQNVQVMTFGQPRI 139 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~---~~I~vTGHSLGGAlA~L~a~~l~~~~-----~~~~v~~~TFG~Prv 139 (286)
..++.+.|+...+++|. .+++++|.|-||--+-.+|.++.... +.-+++-+..|.|-+
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 35677888888888884 47999999999986666666664422 123567778888765
No 212
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=35.79 E-value=91 Score=30.64 Aligned_cols=47 Identities=21% Similarity=0.293 Sum_probs=33.6
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcCC
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 126 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~~ 126 (286)
.+.+.+++.|++..++.....-++.=||||| ++++++.-.|...++.
T Consensus 111 ~~~d~i~d~ir~~~E~cd~l~gf~i~~SlgGGTGSG~gs~l~e~L~d~y~~ 161 (431)
T cd02188 111 EVQEEILDIIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDRYPK 161 (431)
T ss_pred HHHHHHHHHHHHHHhcCCCcceeEEEecCCCCcchhHHHHHHHHHHhHcCc
Confidence 4567778888777766666666777799997 4666666677777753
No 213
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=35.40 E-value=92 Score=29.03 Aligned_cols=57 Identities=14% Similarity=0.098 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHcCC---cEEEEeccChhHHHHHHHHHHhhhhc-----CCcceEEEEecCCcc
Q 023160 83 PAIINAVERAKDFYGD---LNIMVTGHSMGGAMAAFCGLDLTVNL-----GIQNVQVMTFGQPRI 139 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~---~~I~vTGHSLGGAlA~L~a~~l~~~~-----~~~~v~~~TFG~Prv 139 (286)
.++..+|+...+++|. .+++|+|-|-||--.-.+|.++.... +.-+++-+..|-|-+
T Consensus 32 ~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t 96 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 96 (319)
T ss_pred HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCC
Confidence 6777888888888884 57999999999987776677665421 123567777787765
No 214
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=35.02 E-value=80 Score=31.01 Aligned_cols=46 Identities=22% Similarity=0.342 Sum_probs=31.7
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcC
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLG 125 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~ 125 (286)
.+.+++++.|++..++.....=++.=||||| ++++++.-.|...++
T Consensus 112 ~~~~~i~d~ir~~~E~cD~l~gf~i~~sl~GGTGSGlgs~l~e~l~d~y~ 161 (434)
T cd02186 112 EIIDLVLDRIRKLADNCTGLQGFLIFHSFGGGTGSGFGSLLLERLSVDYG 161 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCcceeEEEeccCCCcchhHHHHHHHHHHHhcC
Confidence 4567777888777776555555555699998 566666666777775
No 215
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=34.99 E-value=1.1e+02 Score=28.87 Aligned_cols=55 Identities=20% Similarity=0.138 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHc----CCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCC
Q 023160 83 PAIINAVERAKDFY----GDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQP 137 (286)
Q Consensus 83 ~~~~~~l~~~~~~~----~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~P 137 (286)
++|.+.|+.++... +..+|++.|||-|---................|.-.-+=+|
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQAp 146 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAP 146 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCC
Confidence 45666666666653 45789999999998655433322211111345666666666
No 216
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=34.52 E-value=28 Score=32.58 Aligned_cols=25 Identities=24% Similarity=0.561 Sum_probs=20.8
Q ss_pred EEEEeccChhHHHHHHHHHHhhhhc
Q 023160 100 NIMVTGHSMGGAMAAFCGLDLTVNL 124 (286)
Q Consensus 100 ~I~vTGHSLGGAlA~L~a~~l~~~~ 124 (286)
.=+++|-||||.+|.++|+..-..+
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~F 202 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERF 202 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhh
Confidence 4689999999999999998765544
No 217
>PTZ00387 epsilon tubulin; Provisional
Probab=33.71 E-value=77 Score=31.52 Aligned_cols=47 Identities=19% Similarity=0.150 Sum_probs=32.5
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcCC
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 126 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~~ 126 (286)
...+.+++.|++..++.....=++.=||||| +++++++-.|+..++.
T Consensus 112 ~~~d~~~d~Ir~~~E~cD~l~gf~i~~slgGGTGSGlgs~lle~l~d~y~~ 162 (465)
T PTZ00387 112 KYIDSISESVRRQVEQCDSLQSFFLMHSLGGGTGSGLGTRILGMLEDEFPH 162 (465)
T ss_pred HHHHHHHHHHHHHHHhccCcceEEEEeecCCCcchhHHHHHHHHHHHhccc
Confidence 4567788888877776655554555699998 5667777677777754
No 218
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=33.62 E-value=79 Score=30.45 Aligned_cols=47 Identities=17% Similarity=0.248 Sum_probs=32.1
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcCC
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 126 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~~ 126 (286)
...+++++.|++..++.....-++.=||||| +++.++.-.|+..++.
T Consensus 80 ~~~~~~~d~ir~~~E~cd~l~gf~i~~sl~GGTGSG~gs~l~e~l~~~y~~ 130 (379)
T cd02190 80 QYIDSILEKIRKAAEKCDSLQSFFILHSLGGGTGSGLGTYVLELLADEFPE 130 (379)
T ss_pred hHHHHHHHHHHHHHhhCcCcceEEEEeecCCCcchhHHHHHHHHHHHhcCc
Confidence 3456778888877776665555666799997 4566666666666653
No 219
>PLN00220 tubulin beta chain; Provisional
Probab=32.57 E-value=72 Score=31.42 Aligned_cols=47 Identities=15% Similarity=0.215 Sum_probs=32.4
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhHH----HHHHHHHHhhhhcCC
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGA----MAAFCGLDLTVNLGI 126 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGA----lA~L~a~~l~~~~~~ 126 (286)
.+.+.+++.|++..++.....=++.=|||||+ +++++.-.|+..++.
T Consensus 111 ~~~~~~~d~ir~~~E~cd~l~gf~~~~sl~GGTGSG~gs~l~~~l~~~y~~ 161 (447)
T PLN00220 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPD 161 (447)
T ss_pred HHHHHHHHHHHHHHHhCcCcCceEEEEecCCCccccHHHHHHHHHHHhccc
Confidence 45677888888877776656666667999874 455555566666653
No 220
>PTZ00335 tubulin alpha chain; Provisional
Probab=32.48 E-value=80 Score=31.21 Aligned_cols=47 Identities=19% Similarity=0.298 Sum_probs=31.6
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcCC
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 126 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~~ 126 (286)
.+.+++++.|++..++.....=++.=||||| ++++++.-.|...++.
T Consensus 113 ~~~d~i~d~ir~~~E~cD~l~gf~i~~Sl~GGTGSGlgs~l~e~l~d~yp~ 163 (448)
T PTZ00335 113 EIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGK 163 (448)
T ss_pred hHhHHHHHHHHHhHHhccCccceeEeeccCCCccchHHHHHHHHHHHhccc
Confidence 3567788888777766555554555699998 4666666667777753
No 221
>PRK13980 NAD synthetase; Provisional
Probab=32.24 E-value=2.1e+02 Score=25.83 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc--cChhHHHHHhhcCCCEEEEE
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI--GNAAFASYYTQLVPNTFRVT 159 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv--Gn~~fa~~~~~~~~~~~riv 159 (286)
.+.+...|++..++.+..++ +.|=| ||-=+++++..+...++..++.++++..+.. -+...++.+.+.++-.++++
T Consensus 14 ~~~l~~~l~~~v~~~g~~~v-vv~lS-GGiDSsv~a~l~~~~~~~~~v~av~~~~~~~~~~~~~~a~~la~~lgi~~~~i 91 (265)
T PRK13980 14 REIIVDFIREEVEKAGAKGV-VLGLS-GGIDSAVVAYLAVKALGKENVLALLMPSSVSPPEDLEDAELVAEDLGIEYKVI 91 (265)
T ss_pred HHHHHHHHHHHHHHcCCCcE-EEECC-CCHHHHHHHHHHHHHhCccceEEEEeeCCCCCHHHHHHHHHHHHHhCCCeEEE
Confidence 34566666666666554444 44777 6655555544443334435677777765532 23444554444444334555
Q ss_pred EC
Q 023160 160 NY 161 (286)
Q Consensus 160 ~~ 161 (286)
+-
T Consensus 92 ~i 93 (265)
T PRK13980 92 EI 93 (265)
T ss_pred EC
Confidence 43
No 222
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=31.96 E-value=53 Score=29.69 Aligned_cols=24 Identities=33% Similarity=0.457 Sum_probs=15.8
Q ss_pred HHcCCcEEEEeccChhHHHHHHHH
Q 023160 94 DFYGDLNIMVTGHSMGGAMAAFCG 117 (286)
Q Consensus 94 ~~~~~~~I~vTGHSLGGAlA~L~a 117 (286)
++.+-..-.+.|||||--.|..++
T Consensus 77 ~~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 77 RSWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHcCCcccEEEecCHHHHHHHHHh
Confidence 333333458999999986665544
No 223
>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi
Probab=31.89 E-value=81 Score=30.25 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=30.9
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhHH----HHHHHHHHhhhhcC
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGA----MAAFCGLDLTVNLG 125 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGA----lA~L~a~~l~~~~~ 125 (286)
...+++.+.|++..++.....-++.=|||||+ ++..+.-.+...++
T Consensus 70 ~~~e~~~d~ir~~~E~cD~l~gf~i~~sl~GGTGSG~gs~l~e~l~d~y~ 119 (382)
T cd06059 70 ELIDEILDRIRKQVEKCDSLQGFQITHSLGGGTGSGLGSLLLELLSDEYP 119 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCcCceEEEEecCCCcchhHHHHHHHHHHHhcC
Confidence 34567778888777776666556667999884 55555555666564
No 224
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=31.61 E-value=38 Score=31.33 Aligned_cols=26 Identities=31% Similarity=0.294 Sum_probs=17.4
Q ss_pred HHHHHcCCcEEEEeccChhHHHHHHH
Q 023160 91 RAKDFYGDLNIMVTGHSMGGAMAAFC 116 (286)
Q Consensus 91 ~~~~~~~~~~I~vTGHSLGGAlA~L~ 116 (286)
++++..+-..-.+.|||||=--|..+
T Consensus 76 ~~l~~~Gi~P~~v~GhSlGE~aA~~a 101 (318)
T PF00698_consen 76 RLLRSWGIKPDAVIGHSLGEYAALVA 101 (318)
T ss_dssp HHHHHTTHCESEEEESTTHHHHHHHH
T ss_pred hhhcccccccceeeccchhhHHHHHH
Confidence 34455554556889999997655554
No 225
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=31.40 E-value=58 Score=29.31 Aligned_cols=82 Identities=13% Similarity=0.113 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhc----CCcce-EEEEecCCcccChhHHH-HHhhcC-CC
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNL----GIQNV-QVMTFGQPRIGNAAFAS-YYTQLV-PN 154 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~----~~~~v-~~~TFG~PrvGn~~fa~-~~~~~~-~~ 154 (286)
.+..++.|.+.+++++... =+.|.|.|++||.+++. +.... ..+.+ -++-++.-+.....+.+ ++..-+ -.
T Consensus 88 ~eesl~yl~~~i~enGPFD-GllGFSQGA~laa~l~~-~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~~~i~~P 165 (230)
T KOG2551|consen 88 FEESLEYLEDYIKENGPFD-GLLGFSQGAALAALLAG-LGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYKRPLSTP 165 (230)
T ss_pred hHHHHHHHHHHHHHhCCCc-cccccchhHHHHHHhhc-ccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhccCCCCC
Confidence 4566777888777776332 36799999999998776 22211 12223 24445554444333333 333222 23
Q ss_pred EEEEEECCCcc
Q 023160 155 TFRVTNYHDIV 165 (286)
Q Consensus 155 ~~riv~~~DiV 165 (286)
+++|.-..|-|
T Consensus 166 SLHi~G~~D~i 176 (230)
T KOG2551|consen 166 SLHIFGETDTI 176 (230)
T ss_pred eeEEeccccee
Confidence 55666555543
No 226
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=30.67 E-value=55 Score=30.75 Aligned_cols=17 Identities=41% Similarity=0.485 Sum_probs=12.8
Q ss_pred CCcEEEEeccChhHHHH
Q 023160 97 GDLNIMVTGHSMGGAMA 113 (286)
Q Consensus 97 ~~~~I~vTGHSLGGAlA 113 (286)
+....++.|||||=--|
T Consensus 83 ~~~p~~~aGHSlGEysA 99 (310)
T COG0331 83 GVKPDFVAGHSLGEYSA 99 (310)
T ss_pred CCCCceeecccHhHHHH
Confidence 46667999999996433
No 227
>COG4099 Predicted peptidase [General function prediction only]
Probab=30.16 E-value=75 Score=30.16 Aligned_cols=35 Identities=23% Similarity=0.176 Sum_probs=22.5
Q ss_pred HHHHHHHH-HHHcC--CcEEEEeccChhHHHHHHHHHH
Q 023160 85 IINAVERA-KDFYG--DLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 85 ~~~~l~~~-~~~~~--~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
..+.+.+. ...|. ..+|++||-|.||-.+-.++..
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~k 289 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEK 289 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHh
Confidence 34444433 33443 5699999999998876555543
No 228
>PTZ00010 tubulin beta chain; Provisional
Probab=30.13 E-value=1.2e+02 Score=30.00 Aligned_cols=55 Identities=18% Similarity=0.265 Sum_probs=35.8
Q ss_pred hhhHHHhhhhchHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcCC
Q 023160 70 HGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 126 (286)
Q Consensus 70 ~GF~~~~~~~~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~~ 126 (286)
+|++..-. .+.+.+++.|++..++.....=++.=||||| ++++++.-.|...++.
T Consensus 103 ~G~~~~g~--~~~~~i~d~irk~~E~cd~l~gf~i~~Sl~GGTGSGlgs~l~e~L~dey~~ 161 (445)
T PTZ00010 103 KGHYTEGA--ELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKLREEYPD 161 (445)
T ss_pred cchhhhhH--HHHHHHHHHHhhhhhhccCccceEEEeccCCCccccHHHHHHHHHHhhCCc
Confidence 45554322 4567778888777776655555666699987 5666666667777753
No 229
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=29.98 E-value=34 Score=33.38 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
.+-+.|..+++.-+..+|..+|||+|.+..-.+... ...+ ..+|+.+..=+|.+
T Consensus 146 DLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~-~p~~-~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 146 DLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSE-RPEY-NKKIKSFIALAPAA 199 (403)
T ss_pred CHHHHHHHHHHhccccceEEEEEEccchhheehhcc-cchh-hhhhheeeeecchh
Confidence 344455556665567899999999999876554432 1111 24677777777766
No 230
>PRK08384 thiamine biosynthesis protein ThiI; Provisional
Probab=29.85 E-value=53 Score=31.79 Aligned_cols=29 Identities=17% Similarity=0.369 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHcCCcEEEEeccChhHHHHH
Q 023160 85 IINAVERAKDFYGDLNIMVTGHSMGGAMAA 114 (286)
Q Consensus 85 ~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~ 114 (286)
+...+.++.++. ++..++||||||--..+
T Consensus 272 m~r~a~~iA~~~-g~~~IaTGhslgqvaSQ 300 (381)
T PRK08384 272 MVKHADRIAKEF-GAKGIVMGDSLGQVASQ 300 (381)
T ss_pred HHHHHHHHHHHc-CCCEEEEcccchhHHHH
Confidence 444555555554 67899999999875444
No 231
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=29.80 E-value=74 Score=27.68 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccCh----hHHHHHHHHHHhhh
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSM----GGAMAAFCGLDLTV 122 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSL----GGAlA~L~a~~l~~ 122 (286)
...+.|.++.++.+ ..++++|||. |..+|..+|..|..
T Consensus 95 ~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga 136 (202)
T cd01714 95 ATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGW 136 (202)
T ss_pred HHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCC
Confidence 34445555544433 6899999998 77898888887743
No 232
>cd00553 NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD). The conversion of NaAD to NAD+ occurs via an NAD-adenylate intermediate and requires ATP and Mg2+. The intemediate is subsequently cleaved into NAD+ and AMP. In many prokaryotes, such as E. coli , NAD synthetase consists of a single domain and is strictly ammonia dependent. In contrast, eukaryotes and other prokaryotes have an additional N-terminal amidohydrolase domain that prefer glutamine, Interestingly, NAD+ synthases in these prokaryotes, can also utilize ammonia as an amide source .
Probab=29.62 E-value=2.3e+02 Score=25.17 Aligned_cols=77 Identities=17% Similarity=0.051 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc--cChhHHHHHhhcCCCEEEEEE
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI--GNAAFASYYTQLVPNTFRVTN 160 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv--Gn~~fa~~~~~~~~~~~riv~ 160 (286)
+.+...|++..++.+. +=++.|-| ||-=+++++..+....+..++.++++..+.. .+...++.+.+...-.+.++.
T Consensus 8 ~~l~~~l~~~~~~~~~-~~vvv~lS-GGiDSs~~a~la~~~~~~~~v~~~~~~~~~~~~~~~~~a~~~a~~lgi~~~~i~ 85 (248)
T cd00553 8 NALVLFLRDYLRKSGF-KGVVLGLS-GGIDSALVAALAVRALGRENVLALFMPSRYSSEETREDAKELAEALGIEHVNID 85 (248)
T ss_pred HHHHHHHHHHHHHhCC-CCEEEeCC-CcHHHHHHHHHHHHHhCcccEEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEec
Confidence 4455555555555443 33778888 7765555554444444334667776665422 244455555444443444544
Q ss_pred C
Q 023160 161 Y 161 (286)
Q Consensus 161 ~ 161 (286)
-
T Consensus 86 i 86 (248)
T cd00553 86 I 86 (248)
T ss_pred c
Confidence 3
No 233
>PF13173 AAA_14: AAA domain
Probab=29.38 E-value=58 Score=25.69 Aligned_cols=31 Identities=23% Similarity=0.186 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHH
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMA 113 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA 113 (286)
+.+...++.+....++.+|++||.|.+....
T Consensus 74 ~~~~~~lk~l~d~~~~~~ii~tgS~~~~l~~ 104 (128)
T PF13173_consen 74 PDWEDALKFLVDNGPNIKIILTGSSSSLLSK 104 (128)
T ss_pred ccHHHHHHHHHHhccCceEEEEccchHHHhh
Confidence 4566777777777778999999999877654
No 234
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-
Probab=29.19 E-value=96 Score=30.34 Aligned_cols=56 Identities=16% Similarity=0.258 Sum_probs=35.0
Q ss_pred hhhHHHhhhhchHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcCCc
Q 023160 70 HGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGIQ 127 (286)
Q Consensus 70 ~GF~~~~~~~~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~~~ 127 (286)
.|++..-. .+.+++++.|++.+++.....=++.=||||| ++++.+.-.|...++..
T Consensus 102 ~G~~~~G~--~~~e~i~d~ir~~~E~cD~l~gf~~~~sl~GGTGSG~gs~l~e~l~d~y~~~ 161 (425)
T cd02187 102 KGHYTEGA--ELIDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 161 (425)
T ss_pred ccchhhcH--HHHHHHHHHHHHhhccCCCcceEEEEeecCCCccccHHHHHHHHHHHhcCCc
Confidence 35554222 3556777777777665555554555699987 56666666777777543
No 235
>cd07185 OmpA_C-like Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.
Probab=28.82 E-value=73 Score=23.77 Aligned_cols=25 Identities=16% Similarity=0.256 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCcEEEEeccChhH
Q 023160 86 INAVERAKDFYGDLNIMVTGHSMGG 110 (286)
Q Consensus 86 ~~~l~~~~~~~~~~~I~vTGHSLGG 110 (286)
+..+...++.++.++|.|.||+=..
T Consensus 21 l~~~~~~l~~~~~~~v~v~g~a~~~ 45 (106)
T cd07185 21 LDKLAEVLKKNPDAKIRIEGHTDSR 45 (106)
T ss_pred HHHHHHHHHHCCCceEEEEEEeCCC
Confidence 3445556677888999999999543
No 236
>PLN00221 tubulin alpha chain; Provisional
Probab=28.74 E-value=1.3e+02 Score=29.81 Aligned_cols=55 Identities=18% Similarity=0.300 Sum_probs=36.1
Q ss_pred hhhHHHhhhhchHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcCC
Q 023160 70 HGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 126 (286)
Q Consensus 70 ~GF~~~~~~~~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~~ 126 (286)
.||+..-. .+.+.+++.|++..++.....=++.=||||| ++++++.-.|...++.
T Consensus 105 ~Gy~~~g~--~~~~~i~d~ir~~~E~cD~l~gf~i~~Sl~GGtGSGlgs~~le~l~d~y~~ 163 (450)
T PLN00221 105 RGHYTIGK--EIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163 (450)
T ss_pred ccccchhH--HHHHHHHHHHHHHHHhccCccceeEeeccCCCccchHHHHHHHHHHHhccc
Confidence 35544322 4567788888887776665565566699997 5666666677777753
No 237
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=28.67 E-value=65 Score=29.28 Aligned_cols=24 Identities=25% Similarity=0.051 Sum_probs=16.4
Q ss_pred HHcCCcEEEEeccChhHHHHHHHH
Q 023160 94 DFYGDLNIMVTGHSMGGAMAAFCG 117 (286)
Q Consensus 94 ~~~~~~~I~vTGHSLGGAlA~L~a 117 (286)
++.+-..-.+.|||+|--.|..++
T Consensus 71 ~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 71 LALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HhcCCCCcEEeecCHHHHHHHHHh
Confidence 333445668999999986665544
No 238
>PLN00222 tubulin gamma chain; Provisional
Probab=27.90 E-value=1.4e+02 Score=29.50 Aligned_cols=47 Identities=21% Similarity=0.297 Sum_probs=33.2
Q ss_pred chHHHHHHHHHHHHHHcCCcEEEEeccChhH----HHHHHHHHHhhhhcCC
Q 023160 80 TIRPAIINAVERAKDFYGDLNIMVTGHSMGG----AMAAFCGLDLTVNLGI 126 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~~~~I~vTGHSLGG----AlA~L~a~~l~~~~~~ 126 (286)
.+.+.+++.|++..++.....-++.=||||| ++++++.-.|...++.
T Consensus 113 ~~~d~i~d~ir~~~E~cd~l~gf~i~~sl~GGTGSGlgs~lle~L~d~y~~ 163 (454)
T PLN00222 113 QVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSK 163 (454)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEeecCCCCccchHHHHHHHHHHhhcCC
Confidence 4567777877777666666666677799998 4666666677777754
No 239
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=27.83 E-value=1.2e+02 Score=23.87 Aligned_cols=32 Identities=13% Similarity=0.223 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHHH-HcCCcEEEEeccChhHHHHH
Q 023160 81 IRPAIINAVERAKD-FYGDLNIMVTGHSMGGAMAA 114 (286)
Q Consensus 81 ~~~~~~~~l~~~~~-~~~~~~I~vTGHSLGGAlA~ 114 (286)
+...+...++++.. ..++..|+|++|. |.|..
T Consensus 125 ~~~R~~~~~~~l~~~~~~~~~vliVsHg--~~i~~ 157 (158)
T PF00300_consen 125 FQQRVKQFLDELIAYKRPGENVLIVSHG--GFIRA 157 (158)
T ss_dssp HHHHHHHHHHHHHHHHHTTSEEEEEE-H--HHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEecH--HHHHh
Confidence 34455666666664 6678899999994 55543
No 240
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=27.60 E-value=1.3e+02 Score=26.37 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHHc--CCcEEEEeccChhHHHHHHHHHH
Q 023160 81 IRPAIINAVERAKDFY--GDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~--~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
+...+...++++..++ ++.+|+|++| ||.+..+++..
T Consensus 155 ~~~Rv~~~l~~~~~~~~~~~~~vlvVsH--g~vir~l~~~~ 193 (228)
T PRK14119 155 TLVRVIPFWTDHISQYLLDGQTVLVSAH--GNSIRALIKYL 193 (228)
T ss_pred HHHHHHHHHHHHHHhhccCCCeEEEEeC--hHHHHHHHHHH
Confidence 3455666666655444 5678999999 67777776644
No 241
>TIGR03350 type_VI_ompA type VI secretion system OmpA/MotB family protein. The flagellar motor protein MotB and the Gram-negative bacterial outer membrane protein OmpA share a region of sequence homology. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology.
Probab=27.33 E-value=2.5e+02 Score=22.50 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccC
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHS 107 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHS 107 (286)
..++.+..+++.+| .+|.|.||+
T Consensus 47 ~~L~~ia~~l~~~~-~~i~I~GhT 69 (137)
T TIGR03350 47 PLLDRIAKALAAVP-GRITVVGHT 69 (137)
T ss_pred HHHHHHHHHHHhCC-CeEEEEEec
Confidence 34555666666677 689999998
No 242
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=26.52 E-value=1.7e+02 Score=27.78 Aligned_cols=57 Identities=16% Similarity=0.160 Sum_probs=39.4
Q ss_pred chHHHHHHHHHHHHHHcC----CcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCcc
Q 023160 80 TIRPAIINAVERAKDFYG----DLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 139 (286)
Q Consensus 80 ~~~~~~~~~l~~~~~~~~----~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Prv 139 (286)
.....+++.|...+++.| .++|+|.|-|-|=+||+-.++-+. +....--+.|--|..
T Consensus 19 GCe~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG---~gAdTiGVffE~pgt 79 (398)
T COG3007 19 GCEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG---PGADTIGVFFERPGT 79 (398)
T ss_pred cHHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC---CCCceeeEEeecCCc
Confidence 345677777777776554 689999999999999987766543 223444566766655
No 243
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=26.39 E-value=1.5e+02 Score=25.35 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHH-----cCCcEEEEeccChhHHHHHHHHHHh
Q 023160 82 RPAIINAVERAKDF-----YGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 82 ~~~~~~~l~~~~~~-----~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
...+...++++.+. +++.+|+|++| ||.+..+++..+
T Consensus 123 ~~R~~~~l~~~~~~~~~~~~~~~~vliVsH--g~~ir~ll~~~l 164 (204)
T TIGR03848 123 QARAVAAVREHDARLAAEHGPDAVWVACSH--GDVIKSVLADAL 164 (204)
T ss_pred HHHHHHHHHHHHHHhhhccCCCCEEEEEeC--ChHHHHHHHHHh
Confidence 34455555555443 35668999999 577766665443
No 244
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=25.54 E-value=2.3e+02 Score=26.99 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=29.6
Q ss_pred CcEEEEeccChhHHHHHHHHHHhhhhc-CCcceEEEEecCCccc
Q 023160 98 DLNIMVTGHSMGGAMAAFCGLDLTVNL-GIQNVQVMTFGQPRIG 140 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a~~l~~~~-~~~~v~~~TFG~PrvG 140 (286)
-.+|++.|=|-||.+|.-.|..++... ...+++....=.|-.+
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 457999999999999999999988542 2234444444444443
No 245
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=25.11 E-value=2.1e+02 Score=21.35 Aligned_cols=39 Identities=23% Similarity=0.290 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHH---cCCcEEEEeccChhHHHHHHHHHHh
Q 023160 82 RPAIINAVERAKDF---YGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 82 ~~~~~~~l~~~~~~---~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+..+.+.++.++++ .+.++++|+|-|-|=+||+-.++-+
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 44555555554432 2357999999999999997666543
No 246
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=24.64 E-value=2.7e+02 Score=20.04 Aligned_cols=43 Identities=26% Similarity=0.362 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccC-hhH-HHHHHHHHHhhhhcCCcceEEEEe
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHS-MGG-AMAAFCGLDLTVNLGIQNVQVMTF 134 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHS-LGG-AlA~L~a~~l~~~~~~~~v~~~TF 134 (286)
.+..+|.++.+++|+.. +|.|.+ -|+ .+|.--| .. ..+.++.|
T Consensus 19 ~i~~~Ld~~~~~~~~~~-lvhGga~~GaD~iA~~wA----~~---~gv~~~~~ 63 (71)
T PF10686_consen 19 LIWAALDKVHARHPDMV-LVHGGAPKGADRIAARWA----RE---RGVPVIRF 63 (71)
T ss_pred HHHHHHHHHHHhCCCEE-EEECCCCCCHHHHHHHHH----HH---CCCeeEEe
Confidence 45666777778888755 666666 665 3444433 32 24556665
No 247
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=24.42 E-value=82 Score=31.12 Aligned_cols=46 Identities=20% Similarity=0.283 Sum_probs=27.7
Q ss_pred eEehhhHHHhhhhchHHHHHHHHHHHHHHcC--CcEEEEeccChhHHHHHH
Q 023160 67 MVHHGFYSAYHNTTIRPAIINAVERAKDFYG--DLNIMVTGHSMGGAMAAF 115 (286)
Q Consensus 67 ~VH~GF~~~~~~~~~~~~~~~~l~~~~~~~~--~~~I~vTGHSLGGAlA~L 115 (286)
.-|-||+++-+. -......|+.+++... ...|++.|-|-||.||+-
T Consensus 136 ~~hlgyLtseQA---LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAW 183 (492)
T KOG2183|consen 136 ARHLGYLTSEQA---LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAW 183 (492)
T ss_pred hhhhccccHHHH---HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHH
Confidence 456777766431 1233334444444322 568999999999977754
No 248
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=24.10 E-value=84 Score=28.20 Aligned_cols=20 Identities=25% Similarity=0.229 Sum_probs=14.3
Q ss_pred CcEEEEeccChhHHHHHHHH
Q 023160 98 DLNIMVTGHSMGGAMAAFCG 117 (286)
Q Consensus 98 ~~~I~vTGHSLGGAlA~L~a 117 (286)
-..-.+.|||+|=-.|..++
T Consensus 82 i~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred CCCCEEeecCHHHHHHHHHh
Confidence 34458999999986665544
No 249
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO). Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B (6.3.5.4 from EC) catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase [].; GO: 0004066 asparagine synthase (glutamine-hydrolyzing) activity, 0006529 asparagine biosynthetic process; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A 1Q15_D 1Q19_C 1CT9_C 3K32_F.
Probab=23.34 E-value=2.9e+02 Score=23.69 Aligned_cols=71 Identities=15% Similarity=0.137 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCccc--ChhHHHHHhhcCCCEEE
Q 023160 82 RPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIG--NAAFASYYTQLVPNTFR 157 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~PrvG--n~~fa~~~~~~~~~~~r 157 (286)
++.+.++|++.+...+..-+.+. ||-=+++.+..++. .....+.++|+|.+.-. +..+|+.+.+.....++
T Consensus 3 r~~l~~av~~rl~~~~~i~~~LS----GGlDSs~i~~~~~~-~~~~~~~~~t~~~~~~~~~e~~~a~~va~~~~~~~~ 75 (255)
T PF00733_consen 3 RELLEEAVARRLRSDKPIGILLS----GGLDSSAIAALAAR-QGGPPIKTFTIGFEDDDYDEREYARKVARHLGLEHH 75 (255)
T ss_dssp HHHHHHHHHHHCGCTSEEEEE------SSHHHHHHHHHHHH-TCCSEEEEEEEECSSCC--HHHHHHHHHHHHT-EEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECC----CChhHHHHHHHHHH-hhCCceeEEEEEcCCCcchhHHHHHHHhcccccccc
Confidence 45566666655443333344444 55444444444333 23467899999988887 77788877776554443
No 250
>PRK10510 putative outer membrane lipoprotein; Provisional
Probab=23.07 E-value=96 Score=27.51 Aligned_cols=24 Identities=17% Similarity=0.203 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccC
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHS 107 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHS 107 (286)
..++.+...++++|+.+|.|.||.
T Consensus 129 ~~L~~ia~~L~~~p~~~I~I~GhT 152 (219)
T PRK10510 129 NTLTGVAMVLKEYPKTAVNVVGYT 152 (219)
T ss_pred HHHHHHHHHHHhCCCceEEEEEec
Confidence 445556667788999999999995
No 251
>COG4474 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.40 E-value=3.5e+02 Score=23.35 Aligned_cols=49 Identities=22% Similarity=0.236 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHH-HHHHhhhhcCCcceEE
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAF-CGLDLTVNLGIQNVQV 131 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L-~a~~l~~~~~~~~v~~ 131 (286)
+++.+...|..++.+ +..=+++|| +||==++++ ++.+|...+|.-++.+
T Consensus 27 IKkai~~~l~~llee-GleW~litG-qLG~E~WA~Evv~eLk~eyp~ik~av 76 (180)
T COG4474 27 IKKAIKKKLEALLEE-GLEWVLITG-QLGFELWAAEVVIELKEEYPHIKLAV 76 (180)
T ss_pred HHHHHHHHHHHHHhc-CceEEEEec-cccHHHHHHHHHHHHHhhCCCeeEEE
Confidence 455666666665554 445689999 999876554 5566777776333333
No 252
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=21.93 E-value=2.8e+02 Score=24.42 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHh
Q 023160 85 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 85 ~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
..+.+.++.++.++.+|+|+||+ .++..++....
T Consensus 138 ~~~~i~~~i~~~~~~tVLIVGHn--p~i~~La~~~~ 171 (201)
T PRK15416 138 IYSAIKDLQRKSPDKNIVIFTHN--HCLTYIAKDKR 171 (201)
T ss_pred hHHHHHHHHHhCCCCEEEEEeCc--hhHHHHHHHhc
Confidence 44455666677788889999998 45666666443
No 253
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=21.52 E-value=63 Score=29.28 Aligned_cols=22 Identities=23% Similarity=0.377 Sum_probs=18.0
Q ss_pred EEEeccChhHHHHHHHHHHhhh
Q 023160 101 IMVTGHSMGGAMAAFCGLDLTV 122 (286)
Q Consensus 101 I~vTGHSLGGAlA~L~a~~l~~ 122 (286)
-+|.|||-||-++.+.+..+..
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d 128 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD 128 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC
Confidence 3588999999999988877643
No 254
>PRK15408 autoinducer 2-binding protein lsrB; Provisional
Probab=21.08 E-value=2.6e+02 Score=26.12 Aligned_cols=52 Identities=17% Similarity=0.244 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHHhhhhcCCcceEEEEecCCc
Q 023160 83 PAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPR 138 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~l~~~~~~~~v~~~TFG~Pr 138 (286)
.+..+.++++++++|+.+.+++.-+ .++.+.+.|+.-+ +..++.++.|+.|.
T Consensus 194 ~~a~~~~~~lL~~~pdi~aI~~~~~-~~~~Ga~~Al~~~---g~~~v~VvG~D~~~ 245 (336)
T PRK15408 194 TKSLQTAEGILKAYPDLDAIIAPDA-NALPAAAQAAENL---KRDKVAIVGFSTPN 245 (336)
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCC-ccHHHHHHHHHhC---CCCCEEEEEeCCcH
Confidence 3445567788888999888887633 3333333343321 22378999998775
No 255
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=20.97 E-value=2.3e+02 Score=22.46 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 84 AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 84 ~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
.+.+.++++.+.+++..|+|+||. +.+..++...
T Consensus 85 R~~~~~~~l~~~~~~~~iliV~H~--~~i~~~~~~l 118 (153)
T cd07067 85 RVLPALEELIAPHDGKNVLIVSHG--GVLRALLAYL 118 (153)
T ss_pred HHHHHHHHHHHhCCCCeEEEEeCh--HHHHHHHHHH
Confidence 445556666655566789999994 6666655543
No 256
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=20.90 E-value=1.9e+02 Score=28.72 Aligned_cols=59 Identities=14% Similarity=0.105 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHHHcC---CcEEEEeccChhHH-HHHHHHHHhhhh----cCCcceEEEEecCCcc
Q 023160 81 IRPAIINAVERAKDFYG---DLNIMVTGHSMGGA-MAAFCGLDLTVN----LGIQNVQVMTFGQPRI 139 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~---~~~I~vTGHSLGGA-lA~L~a~~l~~~----~~~~~v~~~TFG~Prv 139 (286)
..+++.+.|++..+++| .-.++|||-|-+|- +-+|+..-+..+ .+.-+++-+..|-|-+
T Consensus 147 ~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 147 TAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred HHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 35678888888888888 45799999999993 333333222222 1234567777777765
No 257
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=20.88 E-value=1.3e+02 Score=23.07 Aligned_cols=37 Identities=27% Similarity=0.332 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHc-CCcEEEEeccChhHHHHHHHHHHhhhh
Q 023160 82 RPAIINAVERAKDFY-GDLNIMVTGHSMGGAMAAFCGLDLTVN 123 (286)
Q Consensus 82 ~~~~~~~l~~~~~~~-~~~~I~vTGHSLGGAlA~L~a~~l~~~ 123 (286)
.+.+...|.++.+.. |+.+|++|| -+|+...-.+...
T Consensus 52 e~k~~~~i~~l~~~~~~~~~ivv~G-----C~aq~~~~~l~~~ 89 (98)
T PF00919_consen 52 EQKSRNRIRKLKKLKKPGAKIVVTG-----CMAQRYGEELKKE 89 (98)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEe-----CccccChHHHHhh
Confidence 356677777777766 889999986 5666655555444
No 258
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=20.79 E-value=2.2e+02 Score=25.18 Aligned_cols=38 Identities=13% Similarity=0.116 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHH-HH-cCCcEEEEeccChhHHHHHHHHHHh
Q 023160 81 IRPAIINAVERAK-DF-YGDLNIMVTGHSMGGAMAAFCGLDL 120 (286)
Q Consensus 81 ~~~~~~~~l~~~~-~~-~~~~~I~vTGHSLGGAlA~L~a~~l 120 (286)
+...+...++++. +. .++.+|+|++| ||.+.++++..+
T Consensus 142 ~~~Rv~~~l~~li~~~~~~~~~vliVsH--G~vir~ll~~l~ 181 (236)
T PTZ00123 142 TVERVLPYWEDHIAPDILAGKKVLVAAH--GNSLRALVKYLD 181 (236)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEEEEeC--HHHHHHHHHHHh
Confidence 3455666666543 22 34678999999 688887777543
No 259
>PRK13462 acid phosphatase; Provisional
Probab=20.60 E-value=2.2e+02 Score=24.58 Aligned_cols=37 Identities=14% Similarity=0.028 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEeccChhHHHHHHHHHH
Q 023160 81 IRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLD 119 (286)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~I~vTGHSLGGAlA~L~a~~ 119 (286)
+...+.+.++++.+.+++.+|+|++|. |.+-.+++..
T Consensus 122 ~~~Rv~~~l~~i~~~~~~~~vliVsHg--~vir~ll~~~ 158 (203)
T PRK13462 122 VNERADRAVALALEHMESRDVVFVSHG--HFSRAVITRW 158 (203)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCC--HHHHHHHHHH
Confidence 455666777777777777789999997 5665555443
No 260
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
Probab=20.54 E-value=3.2e+02 Score=25.36 Aligned_cols=23 Identities=26% Similarity=0.170 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEEec
Q 023160 83 PAIINAVERAKDFYGDLNIMVTG 105 (286)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~I~vTG 105 (286)
+.+.++|+.+++++|+.+|.+|=
T Consensus 124 ~~~~~al~~Lq~~~p~l~vs~Tl 146 (294)
T cd06543 124 DRRAQALALLQKEYPDLKISFTL 146 (294)
T ss_pred HHHHHHHHHHHHHCCCcEEEEec
Confidence 46677788888899999998883
No 261
>PF00691 OmpA: OmpA family; InterPro: IPR006665 This entry represents domain with a beta/alpha/beta/alpha-beta(2) structure found in the C-terminal region of many Gram-negative bacterial outer membrane proteins [], such as porin-like integral membrane proteins (such as ompA) [], small lipid-anchored proteins (such as pal) [], and MotB proton channels []. The N-terminal half is variable although some of the proteins in this group have the OmpA-like transmembrane domain IPR000498 from INTERPRO at the N terminus. OmpA from Escherichia coli is required for pathogenesis, and can interact with host receptor molecules []. MotB (and MotA) serves two functions in E. coli, the MotA(4)-MotB(2) complex attaches to the cell wall via MotB to form the stator of the flagellar motor, and the MotA-MotB complex couples the flow of ions across the cell membrane to movement of the rotor [].; GO: 0009279 cell outer membrane; PDB: 1OAP_A 2W8B_G 2HQS_C 4ERH_A 2ZF8_A 2ZOV_A 2ZVZ_B 2ZVY_A 3TD4_B 3TD5_D ....
Probab=20.19 E-value=1.2e+02 Score=22.35 Aligned_cols=52 Identities=13% Similarity=0.263 Sum_probs=27.0
Q ss_pred HHHHHHHHH--HcCCcEEEEeccChhH-------HHHHH----HHHHhhh-hcCCcceEEEEecCCc
Q 023160 86 INAVERAKD--FYGDLNIMVTGHSMGG-------AMAAF----CGLDLTV-NLGIQNVQVMTFGQPR 138 (286)
Q Consensus 86 ~~~l~~~~~--~~~~~~I~vTGHSLGG-------AlA~L----~a~~l~~-~~~~~~v~~~TFG~Pr 138 (286)
+..|.+.++ ..+. .|.|.||+=.. .||.- ..-.|.. ..+..++.+..||...
T Consensus 17 L~~l~~~l~~~~~~~-~i~I~G~td~~g~~~~n~~LS~~RA~~V~~~L~~~gi~~~ri~~~~~G~~~ 82 (97)
T PF00691_consen 17 LDELAKILKYPGNKD-QIEIEGHTDSTGSAEYNQELSQRRAEAVKQYLVENGIPPERISVVGYGESQ 82 (97)
T ss_dssp HHHHHHHHHSTTSTT-EEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHHHTTSSGGGEEEEEETTTS
T ss_pred HHHHHHHHhCcCCCC-eEEEEEEEcCcchhhHHhHHHHHHHHHHHHHHHHcCCChHhEEEEEEccCC
Confidence 334444444 3345 79999998652 12221 1112222 1245578888898743
Done!