Query 023164
Match_columns 286
No_of_seqs 177 out of 1224
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 08:54:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023164.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023164hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 2.1E-64 4.6E-69 463.0 28.1 274 6-282 73-346 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 9.4E-62 2E-66 441.3 26.7 271 6-282 45-315 (315)
3 cd01847 Triacylglycerol_lipase 100.0 4.2E-54 9.1E-59 385.2 20.9 250 2-281 4-280 (281)
4 PRK15381 pathogenicity island 100.0 1.2E-48 2.7E-53 361.2 21.0 200 40-280 197-399 (408)
5 cd01846 fatty_acyltransferase_ 100.0 7.9E-47 1.7E-51 335.9 21.2 250 2-280 2-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 1.4E-33 3.1E-38 252.1 13.8 223 39-281 106-332 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 6.3E-24 1.4E-28 182.9 13.5 185 39-278 41-234 (234)
8 cd01841 NnaC_like NnaC (CMP-Ne 99.2 6.3E-10 1.4E-14 92.1 13.4 121 92-280 51-172 (174)
9 cd01834 SGNH_hydrolase_like_2 99.0 5.3E-09 1.1E-13 87.3 12.9 130 92-281 61-191 (191)
10 cd01836 FeeA_FeeB_like SGNH_hy 99.0 5.8E-09 1.3E-13 87.6 12.9 121 92-281 67-188 (191)
11 cd01824 Phospholipase_B_like P 99.0 3.4E-08 7.4E-13 88.7 16.8 187 40-283 83-284 (288)
12 cd04501 SGNH_hydrolase_like_4 98.9 1.9E-08 4.2E-13 83.8 13.4 124 92-281 59-182 (183)
13 cd04502 SGNH_hydrolase_like_7 98.9 2.2E-08 4.7E-13 82.7 13.2 119 92-280 50-169 (171)
14 cd01828 sialate_O-acetylestera 98.9 1.5E-08 3.2E-13 83.5 12.1 118 92-281 48-167 (169)
15 cd01839 SGNH_arylesterase_like 98.9 5.3E-09 1.1E-13 89.2 9.4 121 92-282 79-205 (208)
16 cd00229 SGNH_hydrolase SGNH_hy 98.9 1.1E-08 2.4E-13 83.0 10.6 122 91-280 64-186 (187)
17 cd01823 SEST_like SEST_like. A 98.9 1.4E-08 3.1E-13 89.4 11.5 160 92-280 80-258 (259)
18 cd04506 SGNH_hydrolase_YpmR_li 98.9 2.4E-08 5.1E-13 84.8 12.4 135 92-280 68-203 (204)
19 cd01829 SGNH_hydrolase_peri2 S 98.9 2.9E-08 6.3E-13 83.9 11.9 139 92-281 59-197 (200)
20 cd01833 XynB_like SGNH_hydrola 98.9 2.6E-08 5.7E-13 80.9 10.9 116 92-281 40-156 (157)
21 cd01820 PAF_acetylesterase_lik 98.8 3.2E-08 7E-13 84.9 11.4 125 92-286 89-214 (214)
22 cd01830 XynE_like SGNH_hydrola 98.8 4.2E-08 9.1E-13 83.5 9.5 127 93-279 75-201 (204)
23 PF13472 Lipase_GDSL_2: GDSL-l 98.7 8.2E-08 1.8E-12 78.3 10.0 119 92-274 61-179 (179)
24 cd01838 Isoamyl_acetate_hydrol 98.7 8E-08 1.7E-12 80.6 10.1 133 92-280 63-197 (199)
25 cd01835 SGNH_hydrolase_like_3 98.7 2.5E-07 5.3E-12 77.8 11.9 123 92-280 69-191 (193)
26 cd01827 sialate_O-acetylestera 98.7 2.7E-07 5.8E-12 77.1 11.9 119 92-281 67-186 (188)
27 PRK10528 multifunctional acyl- 98.6 2.6E-07 5.7E-12 78.0 10.1 113 92-283 71-184 (191)
28 cd01821 Rhamnogalacturan_acety 98.6 2.1E-07 4.5E-12 78.7 8.9 133 92-281 65-197 (198)
29 cd01832 SGNH_hydrolase_like_1 98.6 4.7E-07 1E-11 75.4 10.7 117 92-280 67-184 (185)
30 cd01822 Lysophospholipase_L1_l 98.5 1.9E-06 4.1E-11 71.1 12.5 112 92-281 64-175 (177)
31 cd01825 SGNH_hydrolase_peri1 S 98.5 3.9E-07 8.5E-12 76.0 8.1 129 92-282 56-185 (189)
32 cd01844 SGNH_hydrolase_like_6 98.4 2.8E-06 6.1E-11 70.6 11.4 118 92-280 57-175 (177)
33 cd01831 Endoglucanase_E_like E 98.3 8.1E-06 1.8E-10 67.2 10.1 22 260-281 146-167 (169)
34 cd01840 SGNH_hydrolase_yrhL_li 98.3 4.8E-06 1.1E-10 67.4 8.6 22 259-280 127-148 (150)
35 cd01826 acyloxyacyl_hydrolase_ 98.3 1.5E-05 3.2E-10 71.2 11.9 149 94-280 124-304 (305)
36 KOG3035 Isoamyl acetate-hydrol 97.9 7E-05 1.5E-09 63.2 8.1 134 92-280 68-206 (245)
37 COG2755 TesA Lysophospholipase 97.6 0.00083 1.8E-08 57.3 10.5 24 261-284 187-210 (216)
38 COG2845 Uncharacterized protei 96.9 0.0052 1.1E-07 55.1 8.2 137 92-281 177-316 (354)
39 PF14606 Lipase_GDSL_3: GDSL-l 96.8 0.012 2.7E-07 48.9 9.7 116 92-280 59-175 (178)
40 KOG3670 Phospholipase [Lipid t 96.6 0.059 1.3E-06 49.8 13.3 82 62-155 160-242 (397)
41 cd01842 SGNH_hydrolase_like_5 94.6 1.2 2.5E-05 37.1 12.1 20 261-280 161-180 (183)
42 COG3240 Phospholipase/lecithin 94.2 0.034 7.4E-07 51.0 2.6 70 91-164 97-166 (370)
43 PF08885 GSCFA: GSCFA family; 86.5 4.5 9.7E-05 35.7 8.3 139 90-277 99-250 (251)
44 PLN02757 sirohydrochlorine fer 76.9 7.5 0.00016 31.5 5.8 63 132-217 60-125 (154)
45 PF02633 Creatininase: Creatin 76.1 14 0.00031 31.9 7.8 84 97-215 61-144 (237)
46 cd04823 ALAD_PBGS_aspartate_ri 71.0 11 0.00024 34.1 5.8 66 127-208 51-116 (320)
47 cd04824 eu_ALAD_PBGS_cysteine_ 67.4 8.9 0.00019 34.7 4.4 66 127-208 48-114 (320)
48 PRK13384 delta-aminolevulinic 65.1 27 0.00059 31.7 7.0 64 127-208 58-121 (322)
49 cd00384 ALAD_PBGS Porphobilino 63.0 33 0.00072 31.1 7.1 64 127-208 48-111 (314)
50 PF00490 ALAD: Delta-aminolevu 62.3 22 0.00047 32.4 5.8 65 128-208 55-119 (324)
51 cd03416 CbiX_SirB_N Sirohydroc 61.9 18 0.00038 26.6 4.6 51 134-207 48-98 (101)
52 PRK09283 delta-aminolevulinic 58.8 25 0.00054 32.0 5.6 64 127-208 56-119 (323)
53 PF01903 CbiX: CbiX; InterPro 54.8 9.2 0.0002 28.3 2.0 52 134-208 41-92 (105)
54 KOG2794 Delta-aminolevulinic a 52.0 25 0.00054 31.2 4.4 93 92-208 39-131 (340)
55 PF13839 PC-Esterase: GDSL/SGN 49.4 1.7E+02 0.0036 25.0 11.4 114 92-216 100-221 (263)
56 COG0113 HemB Delta-aminolevuli 46.4 41 0.00089 30.4 4.9 67 126-208 57-123 (330)
57 cd03414 CbiX_SirB_C Sirohydroc 45.3 76 0.0017 23.8 5.9 51 132-207 47-97 (117)
58 PF08029 HisG_C: HisG, C-termi 40.5 26 0.00057 24.7 2.3 20 133-152 53-72 (75)
59 PF02896 PEP-utilizers_C: PEP- 39.3 70 0.0015 28.9 5.4 51 92-143 195-248 (293)
60 PF07555 NAGidase: beta-N-acet 39.0 1.6E+02 0.0035 26.7 7.8 25 126-150 87-111 (306)
61 PRK13717 conjugal transfer pro 37.5 82 0.0018 24.6 4.8 26 173-198 70-95 (128)
62 COG1015 DeoB Phosphopentomutas 37.5 78 0.0017 29.6 5.4 96 96-209 239-335 (397)
63 PF08331 DUF1730: Domain of un 36.0 1.1E+02 0.0023 21.6 4.9 61 142-203 9-72 (78)
64 TIGR03455 HisG_C-term ATP phos 35.8 45 0.00098 24.9 3.1 23 130-152 74-96 (100)
65 PF06908 DUF1273: Protein of u 35.2 90 0.0019 25.9 5.1 27 124-150 23-49 (177)
66 PRK13660 hypothetical protein; 35.1 2.2E+02 0.0047 23.8 7.4 27 125-151 24-50 (182)
67 PRK09121 5-methyltetrahydropte 33.6 1.3E+02 0.0028 27.7 6.3 31 120-150 146-176 (339)
68 KOG4079 Putative mitochondrial 32.6 20 0.00043 28.4 0.7 16 141-156 42-57 (169)
69 PF04914 DltD_C: DltD C-termin 29.6 47 0.001 26.1 2.4 24 256-279 101-124 (130)
70 PF06812 ImpA-rel_N: ImpA-rela 28.4 22 0.00048 23.8 0.3 9 259-267 52-60 (62)
71 COG4531 ZnuA ABC-type Zn2+ tra 27.5 1.7E+02 0.0037 26.2 5.6 47 175-227 181-231 (318)
72 TIGR02744 TrbI_Ftype type-F co 27.2 1E+02 0.0022 23.6 3.8 26 173-198 57-82 (112)
73 PF11469 Ribonucleas_3_2: Ribo 27.1 34 0.00074 25.7 1.1 19 4-22 5-26 (120)
74 COG3581 Uncharacterized protei 27.1 83 0.0018 29.6 3.8 47 138-209 327-373 (420)
75 cd00419 Ferrochelatase_C Ferro 26.8 1.9E+02 0.0041 22.7 5.5 35 133-181 80-114 (135)
76 cd04236 AAK_NAGS-Urea AAK_NAGS 25.0 2.3E+02 0.0051 25.2 6.3 45 92-154 34-78 (271)
77 cd03411 Ferrochelatase_N Ferro 23.6 85 0.0018 25.3 3.0 24 132-155 101-124 (159)
78 COG1402 Uncharacterized protei 22.9 1.1E+02 0.0024 27.0 3.7 25 127-151 87-111 (250)
79 PRK06520 5-methyltetrahydropte 22.5 1.4E+02 0.003 27.9 4.5 35 120-155 160-194 (368)
80 PRK06233 hypothetical protein; 21.9 1.4E+02 0.0031 27.8 4.5 35 120-155 161-195 (372)
81 CHL00202 argB acetylglutamate 21.2 4.9E+02 0.011 23.1 7.7 63 65-155 5-67 (284)
82 COG1080 PtsA Phosphoenolpyruva 21.1 54 0.0012 32.3 1.5 52 90-144 442-498 (574)
83 PF09677 TrbI_Ftype: Type-F co 20.9 2.3E+02 0.0049 21.6 4.6 25 174-198 57-81 (111)
84 cd03311 CIMS_C_terminal_like C 20.7 3.3E+02 0.0071 24.6 6.6 37 120-157 145-181 (332)
85 PF10746 Phage_holin_6: Phage 20.5 53 0.0011 22.6 1.0 15 3-17 27-41 (66)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=2.1e-64 Score=462.98 Aligned_cols=274 Identities=40% Similarity=0.741 Sum_probs=237.9
Q ss_pred chhHhhHHHHHHhcCCCCCCCCCCCCCCCCCcccCcceecccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHHHhCch
Q 023164 6 SVSLFEFLSAADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSK 85 (286)
Q Consensus 6 ~~~~~~~~~ia~~lGl~~~~p~yl~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~ 85 (286)
|.+++||| |+.|||++++|||+++..++.++.+|+|||+|||++++.++.....+++..||++|+++++++....|..
T Consensus 73 Gr~~~D~i--A~~lGl~p~~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~ 150 (351)
T PLN03156 73 GRIAPDFI--SEAFGLKPAIPAYLDPSYNISDFATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEE 150 (351)
T ss_pred CChhhhhH--HHHhCCCCCCCCCcCcccCchhhcccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChH
Confidence 67788888 9999995499999988655678999999999999998776533346789999999999998888777765
Q ss_pred hHHhhhccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhcc
Q 023164 86 QSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLF 165 (286)
Q Consensus 86 ~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~ 165 (286)
.+.+.++++||+||||+|||+..|+..+.+....+++++++.+++.+.+.|++||++|||||+|+|+||+||+|..+...
T Consensus 151 ~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~ 230 (351)
T PLN03156 151 KANEIISEALYLISIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTN 230 (351)
T ss_pred HHHHHHhcCeEEEEecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhc
Confidence 56677899999999999999865643222222345788999999999999999999999999999999999999976543
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccC
Q 023164 166 GYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCN 245 (286)
Q Consensus 166 ~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~ 245 (286)
..+..+|.+.+|++++.||++|++++++|++++|+++|+++|+|+++.++++||++|||++++++|||.|.++.. ..|+
T Consensus 231 ~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~-~~C~ 309 (351)
T PLN03156 231 LMGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMG-YLCN 309 (351)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCc-cccC
Confidence 223468999999999999999999999999999999999999999999999999999999999999999888876 7899
Q ss_pred CCCCccCCCCCCceecCCCChhHHHHHHHHHHHHhcc
Q 023164 246 PKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQG 282 (286)
Q Consensus 246 ~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 282 (286)
+.....|+||++|+|||++||||++|+++|+.++++.
T Consensus 310 ~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~l 346 (351)
T PLN03156 310 RNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKTL 346 (351)
T ss_pred CCCCCccCCccceEEecCCCchHHHHHHHHHHHHHHH
Confidence 7653489999999999999999999999999999864
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=9.4e-62 Score=441.28 Aligned_cols=271 Identities=43% Similarity=0.834 Sum_probs=233.8
Q ss_pred chhHhhHHHHHHhcCCCCCCCCCCCCCCCCCcccCcceecccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHHHhCch
Q 023164 6 SVSLFEFLSAADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSK 85 (286)
Q Consensus 6 ~~~~~~~~~ia~~lGl~~~~p~yl~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~ 85 (286)
|.+++||+ |+.||+|..+|+|+.+. .+.++.+|+|||+|||++.+.+.....+++|..||++|+++++++....|+.
T Consensus 45 G~~~~d~l--a~~lgl~~~~p~~~~~~-~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~ 121 (315)
T cd01837 45 GRLIIDFI--AEALGLPLLPPPYLSPN-GSSDFLTGVNFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEE 121 (315)
T ss_pred Cchhhhhh--hhhccCCCCCCCccCcc-ccchhhccceecccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHH
Confidence 45667777 99999995588888753 2357899999999999998876432346899999999999998887777876
Q ss_pred hHHhhhccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhcc
Q 023164 86 QSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLF 165 (286)
Q Consensus 86 ~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~ 165 (286)
.+.+..+++||+||||+|||+..+...... ..+..++++.+++++.++|++||++|||||+|+|+||+||+|..+...
T Consensus 122 ~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~--~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~ 199 (315)
T cd01837 122 AAADILSKSLFLISIGSNDYLNNYFANPTR--QYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLF 199 (315)
T ss_pred HHHHHHhCCEEEEEecccccHHHHhcCccc--cCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhc
Confidence 667889999999999999998766432210 235678999999999999999999999999999999999999988764
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccC
Q 023164 166 GYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCN 245 (286)
Q Consensus 166 ~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~ 245 (286)
..+..+|.+.+|++++.||++|++++++|++++|+++|+++|+|++++++++||++|||++++++||+.|.++.. ..|.
T Consensus 200 ~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~~~-~~c~ 278 (315)
T cd01837 200 GGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGG-LLCN 278 (315)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCCcCCCcCccCCCCCCcc-cccC
Confidence 333568999999999999999999999999999999999999999999999999999999999999998876655 6787
Q ss_pred CCCCccCCCCCCceecCCCChhHHHHHHHHHHHHhcc
Q 023164 246 PKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQG 282 (286)
Q Consensus 246 ~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 282 (286)
.....+|++|++|+|||++|||+++|+++|+.+++|.
T Consensus 279 ~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g~ 315 (315)
T cd01837 279 PCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSGP 315 (315)
T ss_pred CCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcCC
Confidence 6544589999999999999999999999999999874
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=4.2e-54 Score=385.15 Aligned_cols=250 Identities=21% Similarity=0.266 Sum_probs=201.5
Q ss_pred ccccchhHhhHHH-----------------------HHHhcCCCCCCCCCCCCCCCCCcccCcceecccCCCCCCCCCCc
Q 023164 2 LYVSSVSLFEFLS-----------------------AADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYL 58 (286)
Q Consensus 2 ~~~~~~~~~~~~~-----------------------ia~~lGl~~~~p~yl~~~~~~~~~~~G~NfA~gGA~~~~~~~~~ 58 (286)
|||||||++|-.. +|+.+|++ ++ +++ .+.+..+|+|||+|||++.+.+...
T Consensus 4 i~vFGDSl~D~Gn~~~~~~~~~~~gRFsnG~~~~d~~~~~~~~~-~~---~~~--~~~~~~~G~NfA~gGa~~~~~~~~~ 77 (281)
T cd01847 4 VVVFGDSLSDVGTYNRAGVGAAGGGRFTVNDGSIWSLGVAEGYG-LT---TGT--ATPTTPGGTNYAQGGARVGDTNNGN 77 (281)
T ss_pred eEEecCcccccCCCCccccCCCCCcceecCCcchHHHHHHHHcC-CC---cCc--CcccCCCCceeeccCccccCCCCcc
Confidence 6888888877432 36666765 22 222 2456789999999999998765321
Q ss_pred ---ccccCHHHHHHHHHHHHHHHHHHhCchhHHhhhccceEEEEecchhHhhhhhcCCc-cCccCChHhhHHHHHHHHHH
Q 023164 59 ---NHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPL-LNKVYTPEQYSSMLVNIFSS 134 (286)
Q Consensus 59 ---~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~-~~~~~~~~~~v~~~v~~~~~ 134 (286)
...++|.+||++|++.+. ...+++||+||||+|||+..+..... .....++.++++.+++++..
T Consensus 78 ~~~~~~~~l~~Qv~~f~~~~~------------~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (281)
T cd01847 78 GAGAVLPSVTTQIANYLAAGG------------GFDPNALYTVWIGGNDLIAALAALTTATTTQAAAVAAAATAAADLAS 145 (281)
T ss_pred ccccCCCCHHHHHHHHHHhcC------------CCCCCeEEEEecChhHHHHHHhhccccccchhhHHHHHHHHHHHHHH
Confidence 235789999999976542 23689999999999999976643221 11113466889999999999
Q ss_pred HHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHH
Q 023164 135 FIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYD 214 (286)
Q Consensus 135 ~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 214 (286)
+|++|+++|||||+|+++||+||+|..+... ..|.+.+|+++..||++|+.++++|+.+ +|+++|+|.++++
T Consensus 146 ~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~----~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~~~~~ 217 (281)
T cd01847 146 QVKNLLDAGARYILVPNLPDVSYTPEAAGTP----AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTATLLKE 217 (281)
T ss_pred HHHHHHHCCCCEEEEeCCCCcccCcchhhcc----chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHHHHHH
Confidence 9999999999999999999999999987652 4688999999999999999999988753 8999999999999
Q ss_pred HhhCCCCCCccccCcccccCcccCCcccccCCCCCccCCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 215 LVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 215 i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
+++||++|||++++++||+.+... .|+......|.+|++|+|||++||||++|+++|+.+++.
T Consensus 218 i~~nP~~yGf~~~~~~CC~~~~~~----~~~~~~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~~ 280 (281)
T cd01847 218 VVANPAAYGFTNTTTPACTSTSAA----GSGAATLVTAAAQSTYLFADDVHPTPAGHKLIAQYALSR 280 (281)
T ss_pred HHhChHhcCccCCCccccCCCCcc----ccccccccCCCCccceeeccCCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999976432 344333358999999999999999999999999999863
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1.2e-48 Score=361.24 Aligned_cols=200 Identities=20% Similarity=0.297 Sum_probs=170.1
Q ss_pred CcceecccCCCCCCCCCC-c--ccccCHHHHHHHHHHHHHHHHHHhCchhHHhhhccceEEEEecchhHhhhhhcCCccC
Q 023164 40 IGANFASAGSGYDDRTSY-L--NHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLN 116 (286)
Q Consensus 40 ~G~NfA~gGA~~~~~~~~-~--~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~ 116 (286)
+|+|||+|||++...... . ...++|..||++|.. .+++||+||+|+|||+. +
T Consensus 197 ~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~-----------------~~~aL~lV~iG~NDy~~-~------- 251 (408)
T PRK15381 197 EMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTP-----------------SHQDLAIFLLGANDYMT-L------- 251 (408)
T ss_pred CCceEeecccccccccccccccCccCCHHHHHHHHHh-----------------cCCcEEEEEeccchHHH-h-------
Confidence 799999999999732111 0 124689999998632 15799999999999983 3
Q ss_pred ccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 023164 117 KVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQK 196 (286)
Q Consensus 117 ~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~ 196 (286)
..++++.+++.+.++|++||++|||||+|+|+||+||+|..+.. ...+.+|+++..||++|+++|++|++
T Consensus 252 ----~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~------~~~~~~N~~a~~fN~~L~~~L~~L~~ 321 (408)
T PRK15381 252 ----HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS------DEKRKLKDESIAHNALLKTNVEELKE 321 (408)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc------CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12356789999999999999999999999999999999998642 12578999999999999999999999
Q ss_pred hCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCccCCCCCCceecCCCChhHHHHHHHHH
Q 023164 197 QLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIAD 276 (286)
Q Consensus 197 ~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~ 276 (286)
++|+++|+++|+|+++.++++||++|||++++. ||+.|..+.. ..|.+.. ..|. +|+|||.+|||+++|+++|+
T Consensus 322 ~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~~~-cCg~G~~~~~-~~C~p~~-~~C~---~YvFWD~vHPTe~ah~iiA~ 395 (408)
T PRK15381 322 KYPQHKICYYETADAFKVIMEAASNIGYDTENP-YTHHGYVHVP-GAKDPQL-DICP---QYVFNDLVHPTQEVHHCFAI 395 (408)
T ss_pred hCCCCEEEEEEhHHHHHHHHhCHHhcCCCcccc-ccCCCccCCc-cccCccc-CCCC---ceEecCCCCChHHHHHHHHH
Confidence 999999999999999999999999999999986 9999876654 6787765 3784 99999999999999999999
Q ss_pred HHHh
Q 023164 277 ELIV 280 (286)
Q Consensus 277 ~~~~ 280 (286)
.+-+
T Consensus 396 ~~~~ 399 (408)
T PRK15381 396 MLES 399 (408)
T ss_pred HHHH
Confidence 8754
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=7.9e-47 Score=335.89 Aligned_cols=250 Identities=26% Similarity=0.419 Sum_probs=200.5
Q ss_pred ccccchhHhhHHHHHHhcC--CCCCCCCCCCCCC-CCC----------c---ccCcceecccCCCCCCCCC--CcccccC
Q 023164 2 LYVSSVSLFEFLSAADTLG--FKTYAPAYLSPQA-TGK----------N---LLIGANFASAGSGYDDRTS--YLNHAIS 63 (286)
Q Consensus 2 ~~~~~~~~~~~~~ia~~lG--l~~~~p~yl~~~~-~~~----------~---~~~G~NfA~gGA~~~~~~~--~~~~~~~ 63 (286)
|||||||++|-..+..... .+...|+|-.... ++. . ..+|+|||+|||++.+.+. ......+
T Consensus 2 l~vFGDS~sD~Gn~~~~~~~~~~~~~~~~~~grfsnG~~w~d~la~~lg~~~~~~~~N~A~~Ga~~~~~~~~~~~~~~~~ 81 (270)
T cd01846 2 LVVFGDSLSDTGNIFKLTGGSNPPPSPPYFGGRFSNGPVWVEYLAATLGLSGLKQGYNYAVGGATAGAYNVPPYPPTLPG 81 (270)
T ss_pred eEEeeCccccCCcchhhcCCCCCCCCCCCCCCccCCchhHHHHHHHHhCCCccCCcceeEecccccCCcccCCCCCCCCC
Confidence 7999999999986543321 2223444532211 121 1 2489999999999976643 1233578
Q ss_pred HHHHHHHHHHHHHHHHHHhCchhHHhhhccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhC
Q 023164 64 LTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLG 143 (286)
Q Consensus 64 l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~G 143 (286)
+..||++|++.++. +..+++|++||+|+||+...+.. + .....+++.+++++.++|++|+++|
T Consensus 82 l~~Qv~~f~~~~~~-----------~~~~~~l~~i~~G~ND~~~~~~~-~-----~~~~~~~~~~~~~~~~~i~~l~~~g 144 (270)
T cd01846 82 LSDQVAAFLAAHKL-----------RLPPDTLVAIWIGANDLLNALDL-P-----QNPDTLVTRAVDNLFQALQRLYAAG 144 (270)
T ss_pred HHHHHHHHHHhccC-----------CCCCCcEEEEEeccchhhhhccc-c-----ccccccHHHHHHHHHHHHHHHHHCC
Confidence 99999999876532 34588999999999999875422 1 1344667899999999999999999
Q ss_pred CcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCC
Q 023164 144 ARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSG 223 (286)
Q Consensus 144 ar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yG 223 (286)
+|+|+|+++||+||+|..+..... ..+.++.+++.||++|++++++|++++|+.+|+++|+|.++.++++||++||
T Consensus 145 ~~~i~v~~~p~~~~~P~~~~~~~~----~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~p~~yG 220 (270)
T cd01846 145 ARNFLVLNLPDLGLTPAFQAQGDA----VAARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDILDNPAAYG 220 (270)
T ss_pred CCEEEEeCCCCCCCCcccccCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHhCHHhcC
Confidence 999999999999999999875421 1268999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccccCcccCCcccccCCCCCccCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 224 FVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 224 f~~~~~aCc~~g~~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
|+++..+||+.+ .|.... ..|.+|++|+|||++|||+++|+++|+.+++
T Consensus 221 f~~~~~~C~~~~-------~~~~~~-~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 221 FTNVTDPCLDYV-------YSYSPR-EACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred CCcCcchhcCCC-------cccccc-CCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 999999999853 254443 5899999999999999999999999999876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=1.4e-33 Score=252.05 Aligned_cols=223 Identities=22% Similarity=0.345 Sum_probs=172.0
Q ss_pred cCcceecccCCCCCCCC---CCcccccCHHHHHHHHHHHHHHHHHHhCch-hHHhhhccceEEEEecchhHhhhhhcCCc
Q 023164 39 LIGANFASAGSGYDDRT---SYLNHAISLTQQLQYYREYQSKLAKVAGSK-QSASIIKDAIYIVGSGSGDFLQNYYVNPL 114 (286)
Q Consensus 39 ~~G~NfA~gGA~~~~~~---~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~-~~~~~~~~sL~~i~iG~ND~~~~~~~~~~ 114 (286)
..|.|||+|||++...+ .......++.+|+.+|....... .++.. ..-......|+.+|.|+||++..-..+.
T Consensus 106 a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~--~v~~~~~~~~l~p~~l~~~~ggand~~~~~~~~a- 182 (370)
T COG3240 106 AGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGG--FVWPNYPAQGLDPSALYFLWGGANDYLALPMLKA- 182 (370)
T ss_pred cccccHhhhccccccccccccccccccchHHHHHHHHHhcCCc--cccccccccccCHHHHHHHhhcchhhhcccccch-
Confidence 47999999999986554 12345678999999998765431 00111 1112346788899999999986422211
Q ss_pred cCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 023164 115 LNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNL 194 (286)
Q Consensus 115 ~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l 194 (286)
...+.+......++...|++|.+.|||+++|+++|+++.+|..... +.-...+.+++..||..|++.|+++
T Consensus 183 ----~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~-----~~~~~~a~~~t~~~Na~L~~~L~~~ 253 (370)
T COG3240 183 ----AAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAY-----GTEAIQASQATIAFNASLTSQLEQL 253 (370)
T ss_pred ----hhhHHHhcchhhHHHHHHHHHHHhhccEEEEeeccccccccccccc-----cchHHHHHHHHHHHHHHHHHHHHHh
Confidence 1122333444667999999999999999999999999999998753 2223378889999999999999987
Q ss_pred HHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCccCCCCCCceecCCCChhHHHHHHH
Q 023164 195 QKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVI 274 (286)
Q Consensus 195 ~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~i 274 (286)
+ .+|+.+|++.+++++++||++|||+|++..||.....+ ..|....+..|..|++|+|||.+|||+++|++|
T Consensus 254 g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~~---~~~~a~~p~~~~~~~~ylFaD~vHPTt~~H~li 325 (370)
T COG3240 254 G-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVSN---PACSASLPALCAAPQKYLFADSVHPTTAVHHLI 325 (370)
T ss_pred c-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccCC---cccccccccccCCccceeeecccCCchHHHHHH
Confidence 4 78999999999999999999999999999999876544 356665554566788999999999999999999
Q ss_pred HHHHHhc
Q 023164 275 ADELIVQ 281 (286)
Q Consensus 275 A~~~~~~ 281 (286)
|+++++-
T Consensus 326 Aeyila~ 332 (370)
T COG3240 326 AEYILAR 332 (370)
T ss_pred HHHHHHH
Confidence 9999863
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.91 E-value=6.3e-24 Score=182.87 Aligned_cols=185 Identities=27% Similarity=0.513 Sum_probs=133.8
Q ss_pred cCcceecccCCCCCCCCCCcc-cccCHHHHHHHHHHHHHHHHHHhCchhHHhhhccceEEEEecchhHhhhhhcCCccCc
Q 023164 39 LIGANFASAGSGYDDRTSYLN-HAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNK 117 (286)
Q Consensus 39 ~~G~NfA~gGA~~~~~~~~~~-~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~ 117 (286)
..+.|+|.+|+++........ ....+..|+...... ....+.+|++|++|+||++.. ..
T Consensus 41 ~~~~n~a~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~lv~i~~G~ND~~~~--~~----- 100 (234)
T PF00657_consen 41 VDVSNYAISGATSDGDLYNLWAQVQNISQQISRLLDS-------------KSFYDPDLVVIWIGTNDYFNN--RD----- 100 (234)
T ss_dssp EEEEEEE-TT--CC-HGGCCCCTCHHHHHHHHHHHHH-------------HHHHTTSEEEEE-SHHHHSSC--CS-----
T ss_pred CCeeccccCCCccccccchhhHHHHHHHHHhhccccc-------------cccCCcceEEEecccCcchhh--cc-----
Confidence 457899999999753321000 111123333322111 223578999999999999751 11
Q ss_pred cCChHhhHHHHHHHHHHHHHHHHhhCCc-----EEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 023164 118 VYTPEQYSSMLVNIFSSFIKNMYGLGAR-----KFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAAT 192 (286)
Q Consensus 118 ~~~~~~~v~~~v~~~~~~v~~L~~~Gar-----~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~ 192 (286)
.......++.+++++.+.|++|++.|+| +++++++||++|.|....... ....|.+.+++.+..||++|++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~l~~~~~ 179 (234)
T PF00657_consen 101 SSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK-DSASCIERLNAIVAAFNSALREVAA 179 (234)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT-TTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccc-cccccchhhHHHHHHHHHHHHHHhh
Confidence 1234566788999999999999999999 999999999999888765432 2468999999999999999999999
Q ss_pred HHHHhCC-CCcEEEEeccHHHHHH--hhCCCCCCccccCcccccCcccCCcccccCCCCCccCCCCCCceecCCCChhHH
Q 023164 193 NLQKQLP-DLKIVIFDIFKPIYDL--VQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQA 269 (286)
Q Consensus 193 ~l~~~~~-~~~i~~~D~~~~~~~i--~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~ 269 (286)
+++..++ +.++.++|++..+.++ ..+|.. ++|+|||++|||++
T Consensus 180 ~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~----------------------------------~~~~~~D~~Hpt~~ 225 (234)
T PF00657_consen 180 QLRKDYPKGANVPYFDIYSIFSDMYGIQNPEN----------------------------------DKYMFWDGVHPTEK 225 (234)
T ss_dssp HHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGH----------------------------------HHCBBSSSSSB-HH
T ss_pred hcccccccCCceEEEEHHHHHHHhhhccCccc----------------------------------ceeccCCCcCCCHH
Confidence 9987765 8899999999999997 555532 46799999999999
Q ss_pred HHHHHHHHH
Q 023164 270 ANQVIADEL 278 (286)
Q Consensus 270 ~h~~iA~~~ 278 (286)
+|++||+++
T Consensus 226 g~~~iA~~i 234 (234)
T PF00657_consen 226 GHKIIAEYI 234 (234)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHcCC
Confidence 999999975
No 8
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=99.17 E-value=6.3e-10 Score=92.06 Aligned_cols=121 Identities=17% Similarity=0.187 Sum_probs=81.9
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhh-CCcEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGL-GARKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~-Gar~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|++|+||..... ++ +...+++.+.++++.+. ...+++++++||..-.+.
T Consensus 51 ~pd~v~i~~G~ND~~~~~----------~~----~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~---------- 106 (174)
T cd01841 51 NPSKVFLFLGTNDIGKEV----------SS----NQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE---------- 106 (174)
T ss_pred CCCEEEEEeccccCCCCC----------CH----HHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc----------
Confidence 447889999999985311 22 45677788888888765 456788999888643221
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
+....++....||+.+++..++ .++.++|++..+.+ .. +
T Consensus 107 -~~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~----~~--------------~--------------- 145 (174)
T cd01841 107 -IKTRSNTRIQRLNDAIKELAPE-------LGVTFIDLNDVLVD----EF--------------G--------------- 145 (174)
T ss_pred -cccCCHHHHHHHHHHHHHHHHH-------CCCEEEEcHHHHcC----CC--------------C---------------
Confidence 1123455678899888876543 24889999987643 00 0
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
+..+.+..|++||+++||++||+.+.+
T Consensus 146 ---~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 146 ---NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred ---CccccccCCCcccCHHHHHHHHHHHHh
Confidence 001135679999999999999999865
No 9
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.03 E-value=5.3e-09 Score=87.28 Aligned_cols=130 Identities=15% Similarity=0.177 Sum_probs=85.7
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHH-hhCCcEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMY-GLGARKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~-~~Gar~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|++|.||+...+. . ...+ +...+++.+.|+.+. .....++++++.+|....+.. .
T Consensus 61 ~~d~v~l~~G~ND~~~~~~--~----~~~~----~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~--------~ 122 (191)
T cd01834 61 KPDVVSIMFGINDSFRGFD--D----PVGL----EKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP--------L 122 (191)
T ss_pred CCCEEEEEeecchHhhccc--c----cccH----HHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC--------C
Confidence 3489999999999975321 0 0122 456677778888885 334456777776654322110 0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
.-....++....||+.+++..++ .++.++|.+..+.+....+
T Consensus 123 ~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~iD~~~~~~~~~~~~------------------------------- 164 (191)
T cd01834 123 PDGAEYNANLAAYADAVRELAAE-------NGVAFVDLFTPMKEAFQKA------------------------------- 164 (191)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH-------cCCeEEecHHHHHHHHHhC-------------------------------
Confidence 01245567778888888776542 2588999999887643321
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
+.+++++|++||+++||++||+.+.++
T Consensus 165 ----~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 ----GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred ----CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 123467899999999999999998764
No 10
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.02 E-value=5.8e-09 Score=87.56 Aligned_cols=121 Identities=18% Similarity=0.297 Sum_probs=80.9
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHh-hCCcEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG-LGARKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~-~Gar~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|.+|+||+.... +. ++..+++.+.++++.+ ....++++.++||+++.|....
T Consensus 67 ~pd~Vii~~G~ND~~~~~----------~~----~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~------- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHLT----------SI----ARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ------- 125 (191)
T ss_pred CCCEEEEEecccCcCCCC----------CH----HHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-------
Confidence 458999999999985311 22 4566777777777776 3556899999999887654321
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
......++....+|+.+++..+ ++ ..+.++|.+..+.
T Consensus 126 ~~~~~~~~~~~~~n~~~~~~a~----~~--~~~~~id~~~~~~------------------------------------- 162 (191)
T cd01836 126 PLRWLLGRRARLLNRALERLAS----EA--PRVTLLPATGPLF------------------------------------- 162 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----cC--CCeEEEecCCccc-------------------------------------
Confidence 1122345556677777666554 32 2577788765432
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
.+++..|++||+++||+++|+.+.+.
T Consensus 163 -----~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 -----PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred -----hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 01133599999999999999998764
No 11
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.97 E-value=3.4e-08 Score=88.70 Aligned_cols=187 Identities=14% Similarity=0.102 Sum_probs=103.5
Q ss_pred CcceecccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHHHhCchhHHhhhccceEEEEecchhHhhhhhcCCccCccC
Q 023164 40 IGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVY 119 (286)
Q Consensus 40 ~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~ 119 (286)
.+.|.|+.|+++. +|..|++...+..++ . .. ......=.|++|+||+||+.... ..+. .
T Consensus 83 ~~~N~av~Ga~s~----------dL~~qa~~lv~r~~~---~--~~-i~~~~dwklVtI~IG~ND~c~~~-~~~~---~- 141 (288)
T cd01824 83 SGFNVAEPGAKSE----------DLPQQARLLVRRMKK---D--PR-VDFKNDWKLITIFIGGNDLCSLC-EDAN---P- 141 (288)
T ss_pred cceeecccCcchh----------hHHHHHHHHHHHHhh---c--cc-cccccCCcEEEEEecchhHhhhc-cccc---C-
Confidence 5678888888752 467787754333211 0 00 00001234789999999997522 1110 1
Q ss_pred ChHhhHHHHHHHHHHHHHHHHhhCCc-EEEEccCCCCCccccchhccCC----CCCCcc----------hHHHHHHHHHH
Q 023164 120 TPEQYSSMLVNIFSSFIKNMYGLGAR-KFGVTSLPPLGCLPAARTLFGY----HESGCV----------SRINTDAQQFN 184 (286)
Q Consensus 120 ~~~~~v~~~v~~~~~~v~~L~~~Gar-~~~v~~lpplgc~P~~~~~~~~----~~~~c~----------~~~n~~~~~fN 184 (286)
...+...+++.+.++.|.+..-| .++++++|++..++........ ....|. ..+.++...|+
T Consensus 142 ---~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~~~y~ 218 (288)
T cd01824 142 ---GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKFYKEYQ 218 (288)
T ss_pred ---cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHHHHHHH
Confidence 12355667888888888887755 4667778776544332210000 012232 25566777888
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCccCCCCCCceecCCC
Q 023164 185 KKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSV 264 (286)
Q Consensus 185 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~C~~p~~ylfwD~~ 264 (286)
+.+++..+.-+-+..+..+++. .++.+.+..+. + ...+ .+++-||++
T Consensus 219 ~~~~eia~~~~~~~~~f~vv~q---Pf~~~~~~~~~-------------------------~----~g~d-~~~~~~D~~ 265 (288)
T cd01824 219 NEVEEIVESGEFDREDFAVVVQ---PFFEDTSLPPL-------------------------P----DGPD-LSFFSPDCF 265 (288)
T ss_pred HHHHHHHhcccccccCccEEee---Cchhccccccc-------------------------c----CCCc-chhcCCCCC
Confidence 8777766543222233444442 22222111000 0 0011 246779999
Q ss_pred ChhHHHHHHHHHHHHhccc
Q 023164 265 HPSQAANQVIADELIVQGF 283 (286)
Q Consensus 265 HPT~~~h~~iA~~~~~~~~ 283 (286)
||++++|.++|+.+|..-+
T Consensus 266 Hps~~G~~~ia~~lwn~m~ 284 (288)
T cd01824 266 HFSQRGHAIAANALWNNLL 284 (288)
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 9999999999999997653
No 12
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.95 E-value=1.9e-08 Score=83.79 Aligned_cols=124 Identities=19% Similarity=0.254 Sum_probs=80.8
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 171 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~ 171 (286)
.-++++|.+|.||..... +. ....+++.+.|+.+.+.|++ ++++..||....+...
T Consensus 59 ~~d~v~i~~G~ND~~~~~----------~~----~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~--------- 114 (183)
T cd04501 59 KPAVVIIMGGTNDIIVNT----------SL----EMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP--------- 114 (183)
T ss_pred CCCEEEEEeccCccccCC----------CH----HHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch---------
Confidence 348899999999986311 22 34566777777778778875 6666666654333211
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCcc
Q 023164 172 CVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGT 251 (286)
Q Consensus 172 c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~ 251 (286)
+....++....||+.+++..++ .++.++|.+..+.+...
T Consensus 115 ~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~~---------------------------------- 153 (183)
T cd04501 115 QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDERN---------------------------------- 153 (183)
T ss_pred hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcccc----------------------------------
Confidence 1123455677888887766543 25789999987655210
Q ss_pred CCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 252 CSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 252 C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
....+.+..|++||+++||+++|+.+.+.
T Consensus 154 -~~~~~~~~~DgvHp~~~Gy~~~a~~i~~~ 182 (183)
T cd04501 154 -VGLKPGLLTDGLHPSREGYRVMAPLAEKA 182 (183)
T ss_pred -ccccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 00112345799999999999999998753
No 13
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.94 E-value=2.2e-08 Score=82.71 Aligned_cols=119 Identities=14% Similarity=0.221 Sum_probs=76.4
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCC-cEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|.+|+||+.... + .+...+++.+.|+++.+.+. .+++++++||. |. .
T Consensus 50 ~p~~vvi~~G~ND~~~~~----------~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~~--~------- 103 (171)
T cd04502 50 QPRRVVLYAGDNDLASGR----------T----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---PA--R------- 103 (171)
T ss_pred CCCEEEEEEecCcccCCC----------C----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---Cc--c-------
Confidence 447999999999974211 2 24567788888888887643 35777776552 11 0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
...+.....+|+.+++..+ + ...+.++|++..+.+.-.
T Consensus 104 ---~~~~~~~~~~n~~~~~~a~----~--~~~v~~vD~~~~~~~~~~--------------------------------- 141 (171)
T cd04502 104 ---WALRPKIRRFNALLKELAE----T--RPNLTYIDVASPMLDADG--------------------------------- 141 (171)
T ss_pred ---hhhHHHHHHHHHHHHHHHh----c--CCCeEEEECcHHHhCCCC---------------------------------
Confidence 1123345678877766543 1 235789999876643100
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
....+++..|++||+++||+++|+.+.+
T Consensus 142 --~~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 142 --KPRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred --CcChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 0012345679999999999999998864
No 14
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.94 E-value=1.5e-08 Score=83.47 Aligned_cols=118 Identities=17% Similarity=0.240 Sum_probs=79.0
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHh--hCCcEEEEccCCCCCccccchhccCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG--LGARKFGVTSLPPLGCLPAARTLFGYHE 169 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~--~Gar~~~v~~lpplgc~P~~~~~~~~~~ 169 (286)
.-++++|.+|.||..... ++ +...+++.+.|+++.+ .++ ++++.++||.+ +.
T Consensus 48 ~pd~vvl~~G~ND~~~~~----------~~----~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~--------- 101 (169)
T cd01828 48 QPKAIFIMIGINDLAQGT----------SD----EDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL--------- 101 (169)
T ss_pred CCCEEEEEeeccCCCCCC----------CH----HHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc---------
Confidence 448999999999985311 22 4566677777777776 454 58888888865 10
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCC
Q 023164 170 SGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSP 249 (286)
Q Consensus 170 ~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~ 249 (286)
....++.+..+|+.+++..++ .++.++|.+..+.+ . .|
T Consensus 102 ---~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~----~--~~-------------------------- 139 (169)
T cd01828 102 ---KSIPNEQIEELNRQLAQLAQQ-------EGVTFLDLWAVFTN----A--DG-------------------------- 139 (169)
T ss_pred ---CcCCHHHHHHHHHHHHHHHHH-------CCCEEEechhhhcC----C--CC--------------------------
Confidence 112345567899888776552 25678898865422 0 00
Q ss_pred ccCCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 250 GTCSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 250 ~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
+..+++.+|++|||++||+++|+.+.+-
T Consensus 140 ----~~~~~~~~DgiHpn~~G~~~~a~~i~~~ 167 (169)
T cd01828 140 ----DLKNEFTTDGLHLNAKGYAVWAAALQPY 167 (169)
T ss_pred ----CcchhhccCccccCHHHHHHHHHHHHHh
Confidence 1123466899999999999999998763
No 15
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.93 E-value=5.3e-09 Score=89.21 Aligned_cols=121 Identities=13% Similarity=0.134 Sum_probs=77.9
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhh------CCcEEEEccCCCCCccccchhcc
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGL------GARKFGVTSLPPLGCLPAARTLF 165 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~------Gar~~~v~~lpplgc~P~~~~~~ 165 (286)
.-++++|++|.||+...+. .++ +...+++.+.|+++.+. +..++++++.||+...+..
T Consensus 79 ~pd~vii~lGtND~~~~~~--------~~~----~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~---- 142 (208)
T cd01839 79 PLDLVIIMLGTNDLKSYFN--------LSA----AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGS---- 142 (208)
T ss_pred CCCEEEEeccccccccccC--------CCH----HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccc----
Confidence 5589999999999864210 122 34555666666666654 4667888888886221111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccC
Q 023164 166 GYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCN 245 (286)
Q Consensus 166 ~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~ 245 (286)
...+....++....||+.+++..++. ++.++|.+.++..
T Consensus 143 ---~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~------------------------------- 181 (208)
T cd01839 143 ---LAGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGST------------------------------- 181 (208)
T ss_pred ---hhhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhcc-------------------------------
Confidence 11223345667778888877765532 4667887543210
Q ss_pred CCCCccCCCCCCceecCCCChhHHHHHHHHHHHHhcc
Q 023164 246 PKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQG 282 (286)
Q Consensus 246 ~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 282 (286)
...|++|||++||++||+.+++-.
T Consensus 182 -------------~~~DGvH~~~~G~~~~a~~l~~~i 205 (208)
T cd01839 182 -------------SPVDGVHLDADQHAALGQALASVI 205 (208)
T ss_pred -------------CCCCccCcCHHHHHHHHHHHHHHH
Confidence 125999999999999999998754
No 16
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.92 E-value=1.1e-08 Score=83.00 Aligned_cols=122 Identities=15% Similarity=0.174 Sum_probs=82.2
Q ss_pred hccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHh-hCCcEEEEccCCCCCccccchhccCCCC
Q 023164 91 IKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG-LGARKFGVTSLPPLGCLPAARTLFGYHE 169 (286)
Q Consensus 91 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~-~Gar~~~v~~lpplgc~P~~~~~~~~~~ 169 (286)
..-+++++.+|+||+.... . .+. ....+.+...++.+.+ ....++++++.||.+..|.
T Consensus 64 ~~~d~vil~~G~ND~~~~~-~-------~~~----~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~--------- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG-D-------TSI----DEFKANLEELLDALRERAPGAKVILITPPPPPPREG--------- 122 (187)
T ss_pred CCCCEEEEEeccccccccc-c-------cCH----HHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch---------
Confidence 4678999999999996421 0 011 3345555666666664 4556789999888776654
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCC
Q 023164 170 SGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSP 249 (286)
Q Consensus 170 ~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~ 249 (286)
..+.....+|+.+++..++.... ..+.++|++..+...
T Consensus 123 -----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~---------------------------------- 160 (187)
T cd00229 123 -----LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE---------------------------------- 160 (187)
T ss_pred -----hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC----------------------------------
Confidence 12334567787777766654321 347778887654331
Q ss_pred ccCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 250 GTCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 250 ~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
+..+++||++|||+++|+++|+.+++
T Consensus 161 -----~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 -----DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred -----ccccccCCCCCCchhhHHHHHHHHhc
Confidence 23457899999999999999999875
No 17
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.90 E-value=1.4e-08 Score=89.44 Aligned_cols=160 Identities=14% Similarity=0.065 Sum_probs=86.8
Q ss_pred ccceEEEEecchhHhhhhhc-----CCc--------cCccCChHhhHHHHHHHHHHHHHHHHhh-CCcEEEEccCCCCCc
Q 023164 92 KDAIYIVGSGSGDFLQNYYV-----NPL--------LNKVYTPEQYSSMLVNIFSSFIKNMYGL-GARKFGVTSLPPLGC 157 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~-----~~~--------~~~~~~~~~~v~~~v~~~~~~v~~L~~~-Gar~~~v~~lpplgc 157 (286)
.-++++|++|+||+...... ... ...........+...+++.+.|++|.+. .-.++++++.|++--
T Consensus 80 ~~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~ 159 (259)
T cd01823 80 DTDLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFP 159 (259)
T ss_pred CCCEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEeccccccc
Confidence 36899999999998643211 000 0000011233455667777777777754 334688999887421
Q ss_pred cc-cchh----ccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccc
Q 023164 158 LP-AART----LFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCC 232 (286)
Q Consensus 158 ~P-~~~~----~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc 232 (286)
.- .... ....-.....+..++....+|+.+++..++ +...++.++|++..+.. ...|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~----~~~~~v~fvD~~~~f~~-------------~~~~~ 222 (259)
T cd01823 160 PDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAAD----AGDYKVRFVDTDAPFAG-------------HRACS 222 (259)
T ss_pred CCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hCCceEEEEECCCCcCC-------------Ccccc
Confidence 00 0000 000000112234566677777777665543 32356899999876543 12232
Q ss_pred cCcccCCcccccCCCCCccCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 233 GTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 233 ~~g~~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
... ++... .+......-|++||+++||+.||+.+.+
T Consensus 223 ~~~-------~~~~~-----~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 223 PDP-------WSRSV-----LDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred CCC-------ccccc-----cCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 211 00000 0112234569999999999999999875
No 18
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.90 E-value=2.4e-08 Score=84.80 Aligned_cols=135 Identities=19% Similarity=0.185 Sum_probs=82.9
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCC-cEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|.+|+||+..................-.+....++.+.|+++.+.+. .+++++++++ |.....
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~----p~~~~~------ 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYN----PFYVYF------ 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCC----cccccc------
Confidence 45889999999999764321100000001122235567788888888887654 3577776532 211110
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
.-....++.+..||+.+++..++ ..++.++|++..+..--
T Consensus 138 ~~~~~~~~~~~~~n~~~~~~a~~------~~~v~~vd~~~~~~~~~---------------------------------- 177 (204)
T cd04506 138 PNITEINDIVNDWNEASQKLASQ------YKNAYFVPIFDLFSDGQ---------------------------------- 177 (204)
T ss_pred chHHHHHHHHHHHHHHHHHHHHh------CCCeEEEehHHhhcCCc----------------------------------
Confidence 01224577888999887776542 12488999987664300
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
+..++..|++||+++||++||+.+++
T Consensus 178 ----~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 178 ----NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred ----ccccccccCcCCCHHHHHHHHHHHHh
Confidence 11235579999999999999999875
No 19
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.87 E-value=2.9e-08 Score=83.86 Aligned_cols=139 Identities=12% Similarity=0.077 Sum_probs=83.8
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 171 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~ 171 (286)
.-++++|.+|+||+......+. . ......++.+...+++...++++.+.|++ +++++.||+.-
T Consensus 59 ~pd~vii~~G~ND~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~-------------- 121 (200)
T cd01829 59 KPDVVVVFLGANDRQDIRDGDG-Y-LKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS-------------- 121 (200)
T ss_pred CCCEEEEEecCCCCccccCCCc-e-eecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC--------------
Confidence 4478999999999864221110 0 00112344556667777777777777775 77788777531
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCcc
Q 023164 172 CVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGT 251 (286)
Q Consensus 172 c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~ 251 (286)
...++....+|+.+++..++ ..+.++|++..+.+ + ..|+... .. ..
T Consensus 122 --~~~~~~~~~~~~~~~~~a~~-------~~~~~id~~~~~~~----~---------~~~~~~~------~~------~~ 167 (200)
T cd01829 122 --PKLSADMVYLNSLYREEVAK-------AGGEFVDVWDGFVD----E---------NGRFTYS------GT------DV 167 (200)
T ss_pred --hhHhHHHHHHHHHHHHHHHH-------cCCEEEEhhHhhcC----C---------CCCeeee------cc------CC
Confidence 12234556778776665442 23788999877633 1 1233110 00 01
Q ss_pred CCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 252 CSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 252 C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
..++..+...|++|||+++|+++|+.+.+.
T Consensus 168 ~~~~~~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 168 NGKKVRLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred CCcEEEeecCCCceECHHHHHHHHHHHHHH
Confidence 122334556799999999999999998864
No 20
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.86 E-value=2.6e-08 Score=80.90 Aligned_cols=116 Identities=18% Similarity=0.290 Sum_probs=82.4
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCC-cEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|.+|+||..... ++ +...+++.+.|+++.+.+. .++++.++||..-.+
T Consensus 40 ~pd~vvi~~G~ND~~~~~----------~~----~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~----------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLNR----------DP----DTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS----------- 94 (157)
T ss_pred CCCEEEEeccCcccccCC----------CH----HHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc-----------
Confidence 558999999999986421 22 4566777777888877633 246666666632111
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
.+.....||+.+++.+++.... +..+.++|++..+..
T Consensus 95 -----~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~------------------------------------ 131 (157)
T cd01833 95 -----GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT------------------------------------ 131 (157)
T ss_pred -----hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC------------------------------------
Confidence 1566789999999999876553 567899998764421
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
+++.+|++||+++||+.||+.+++.
T Consensus 132 ------~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 ------ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred ------cccccCCCCCchHHHHHHHHHHHhh
Confidence 1256899999999999999999864
No 21
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.84 E-value=3.2e-08 Score=84.90 Aligned_cols=125 Identities=18% Similarity=0.155 Sum_probs=81.5
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhC-CcEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLG-ARKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~G-ar~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-.+++|++|+||+.... ++ +.+.+++...|+++.+.. ..++++++++|.+..|
T Consensus 89 ~pd~VvI~~G~ND~~~~~----------~~----~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~----------- 143 (214)
T cd01820 89 NPKVVVLLIGTNNIGHTT----------TA----EEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP----------- 143 (214)
T ss_pred CCCEEEEEecccccCCCC----------CH----HHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc-----------
Confidence 358899999999985321 22 456677778888887663 3468888888754321
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
...++....+|+.+++... + ..++.++|.+..+.+ .. |
T Consensus 144 ---~~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~~---~~---------------g--------------- 181 (214)
T cd01820 144 ---NPLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFVQ---SD---------------G--------------- 181 (214)
T ss_pred ---hhHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhcc---cC---------------C---------------
Confidence 1233445677777665432 1 236889998876532 00 0
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHhccccCC
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIVQGFALL 286 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~~~~~ 286 (286)
...+.++.|++||+++||+++|+.+.+...++|
T Consensus 182 ---~~~~~~~~DGlHpn~~Gy~~~a~~l~~~l~~~~ 214 (214)
T cd01820 182 ---TISHHDMPDYLHLTAAGYRKWADALHPTLARLL 214 (214)
T ss_pred ---CcCHhhcCCCCCCCHHHHHHHHHHHHHHHHhhC
Confidence 011124579999999999999999988765554
No 22
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.77 E-value=4.2e-08 Score=83.53 Aligned_cols=127 Identities=16% Similarity=0.130 Sum_probs=72.2
Q ss_pred cceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCc
Q 023164 93 DAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGC 172 (286)
Q Consensus 93 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c 172 (286)
-++++|.+|.||+........ .....++...+++...++++.+.|+ ++++.++||..-.|..
T Consensus 75 p~~vii~~G~ND~~~~~~~~~------~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~~~~~~----------- 136 (204)
T cd01830 75 VRTVIILEGVNDIGASGTDFA------AAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFEGSGYY----------- 136 (204)
T ss_pred CCEEEEecccccccccccccc------cCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCCCCCCC-----------
Confidence 367899999999864221110 0111235667788888888888887 5778888875432211
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCccC
Q 023164 173 VSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTC 252 (286)
Q Consensus 173 ~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~C 252 (286)
.... +.+++++.+.+.+. .... .++|+++.+.+... + .
T Consensus 137 ~~~~----~~~~~~~n~~~~~~----~~~~-~~vD~~~~~~~~~~-~--------------------------------~ 174 (204)
T cd01830 137 TPAR----EATRQAVNEWIRTS----GAFD-AVVDFDAALRDPAD-P--------------------------------S 174 (204)
T ss_pred CHHH----HHHHHHHHHHHHcc----CCCC-eeeEhHHhhcCCCC-c--------------------------------h
Confidence 1111 22233333333221 1112 35898876543000 0 0
Q ss_pred CCCCCceecCCCChhHHHHHHHHHHHH
Q 023164 253 SNASQYVFWDSVHPSQAANQVIADELI 279 (286)
Q Consensus 253 ~~p~~ylfwD~~HPT~~~h~~iA~~~~ 279 (286)
.-..+|+.+|++||+++||++||+.+.
T Consensus 175 ~~~~~~~~~DGvHpn~~Gy~~~A~~i~ 201 (204)
T cd01830 175 RLRPAYDSGDHLHPNDAGYQAMADAVD 201 (204)
T ss_pred hcccccCCCCCCCCCHHHHHHHHHhcC
Confidence 001235668999999999999999874
No 23
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.74 E-value=8.2e-08 Score=78.29 Aligned_cols=119 Identities=22% Similarity=0.353 Sum_probs=77.6
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 171 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~ 171 (286)
.-++++|.+|+||.... . ......+...+++.+.|+++...+ +++++++||..-.+.. .
T Consensus 61 ~~d~vvi~~G~ND~~~~--~--------~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~---------~ 119 (179)
T PF13472_consen 61 KPDLVVISFGTNDVLNG--D--------ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRD---------P 119 (179)
T ss_dssp TCSEEEEE--HHHHCTC--T--------TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTT---------T
T ss_pred CCCEEEEEccccccccc--c--------cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccc---------c
Confidence 44799999999999752 0 122334677888888888898888 8888888875533221 1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCcc
Q 023164 172 CVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGT 251 (286)
Q Consensus 172 c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~ 251 (286)
+..........+|+.+++..+ ++ .+.++|++..+.+ +.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~~~----~~------------------------------- 157 (179)
T PF13472_consen 120 KQDYLNRRIDRYNQAIRELAK----KY---GVPFIDLFDAFDD----HD------------------------------- 157 (179)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH----HC---TEEEEEHHHHHBT----TT-------------------------------
T ss_pred cchhhhhhHHHHHHHHHHHHH----Hc---CCEEEECHHHHcc----cc-------------------------------
Confidence 123445667788887776544 32 6889999887532 10
Q ss_pred CCCCCCceecCCCChhHHHHHHH
Q 023164 252 CSNASQYVFWDSVHPSQAANQVI 274 (286)
Q Consensus 252 C~~p~~ylfwD~~HPT~~~h~~i 274 (286)
....++++.|++|||++||++|
T Consensus 158 -~~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 158 -GWFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp -SCBHTCTBTTSSSBBHHHHHHH
T ss_pred -ccchhhcCCCCCCcCHHHhCcC
Confidence 0112346689999999999986
No 24
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.73 E-value=8e-08 Score=80.65 Aligned_cols=133 Identities=13% Similarity=0.165 Sum_probs=81.3
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHh--hCCcEEEEccCCCCCccccchhccCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG--LGARKFGVTSLPPLGCLPAARTLFGYHE 169 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~--~Gar~~~v~~lpplgc~P~~~~~~~~~~ 169 (286)
.-++++|++|.||...... + ...++ +...+++...|+++.+ .|+ ++++++.||++-......... .
T Consensus 63 ~pd~vii~~G~ND~~~~~~--~---~~~~~----~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~--~ 130 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQ--P---QHVPL----DEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED--G 130 (199)
T ss_pred CceEEEEEecCccccCCCC--C---CcccH----HHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc--c
Confidence 5689999999999864211 0 00122 3455666677777766 455 588888877653221100000 0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCC
Q 023164 170 SGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSP 249 (286)
Q Consensus 170 ~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~ 249 (286)
.......++....||+.+++..++. .+.++|++..+... +.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~~---~~----------------------------- 171 (199)
T cd01838 131 GSQPGRTNELLKQYAEACVEVAEEL-------GVPVIDLWTAMQEE---AG----------------------------- 171 (199)
T ss_pred cCCccccHHHHHHHHHHHHHHHHHh-------CCcEEEHHHHHHhc---cC-----------------------------
Confidence 1123345667788888776655432 47789998876541 10
Q ss_pred ccCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 250 GTCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 250 ~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
..+.++.|++||+++||+++|+.+.+
T Consensus 172 -----~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 172 -----WLESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred -----chhhhcCCCCCcCHhHHHHHHHHHHh
Confidence 01124569999999999999999875
No 25
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.70 E-value=2.5e-07 Score=77.83 Aligned_cols=123 Identities=11% Similarity=0.146 Sum_probs=72.0
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 171 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~ 171 (286)
+-++++|.+|.||...... . ....+.++ ..+.+...++++ +.++ +++++++||+.-.+
T Consensus 69 ~pd~V~i~~G~ND~~~~~~--~--~~~~~~~~----~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~------------ 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGR--K--RPQLSARA----FLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK------------ 126 (193)
T ss_pred CCCEEEEEecCcccccccC--c--ccccCHHH----HHHHHHHHHHHH-hcCC-cEEEEeCCCccccc------------
Confidence 4589999999999965311 0 01112222 333333334333 2344 57787877753211
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCcc
Q 023164 172 CVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGT 251 (286)
Q Consensus 172 c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~ 251 (286)
....++....+|+.+++..++ .++.++|++..+.+. +. +
T Consensus 127 -~~~~~~~~~~~n~~~~~~a~~-------~~~~~vd~~~~~~~~---~~----------------------~-------- 165 (193)
T cd01835 127 -MPYSNRRIARLETAFAEVCLR-------RDVPFLDTFTPLLNH---PQ----------------------W-------- 165 (193)
T ss_pred -cchhhHHHHHHHHHHHHHHHH-------cCCCeEeCccchhcC---cH----------------------H--------
Confidence 112345667788887766543 246789998766541 10 0
Q ss_pred CCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 252 CSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 252 C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
..++...|++||+++||++||+.++.
T Consensus 166 ---~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 166 ---RRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred ---HHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 00122359999999999999999864
No 26
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.69 E-value=2.7e-07 Score=77.14 Aligned_cols=119 Identities=17% Similarity=0.203 Sum_probs=72.7
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCC-cEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|.+|.||..... . ... +....++.+.|+++.+.+. .++++.+.||......
T Consensus 67 ~pd~Vii~~G~ND~~~~~---~-----~~~----~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~---------- 124 (188)
T cd01827 67 NPNIVIIKLGTNDAKPQN---W-----KYK----DDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG---------- 124 (188)
T ss_pred CCCEEEEEcccCCCCCCC---C-----ccH----HHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC----------
Confidence 448999999999985311 0 012 3445667777777776654 4677777766432110
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
.. ...+.....+|+.+++..+ + ..+.++|.+..+.. ++
T Consensus 125 ~~-~~~~~~~~~~~~~~~~~a~----~---~~~~~vD~~~~~~~---~~------------------------------- 162 (188)
T cd01827 125 GF-INDNIIKKEIQPMIDKIAK----K---LNLKLIDLHTPLKG---KP------------------------------- 162 (188)
T ss_pred Cc-cchHHHHHHHHHHHHHHHH----H---cCCcEEEccccccC---Cc-------------------------------
Confidence 11 1123445566666655543 2 24667888764311 00
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
.++-|++||+++||++||+.+++.
T Consensus 163 -------~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 163 -------ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred -------cccCCCCCcCHHHHHHHHHHHHHH
Confidence 133599999999999999998864
No 27
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.63 E-value=2.6e-07 Score=77.95 Aligned_cols=113 Identities=21% Similarity=0.293 Sum_probs=68.3
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEc-cCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVT-SLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~-~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|.+|.||.... .+. +.+.+++...++++.+.|++.+++. .+|+ ..
T Consensus 71 ~pd~Vii~~GtND~~~~----------~~~----~~~~~~l~~li~~~~~~~~~~ill~~~~P~-----~~--------- 122 (191)
T PRK10528 71 QPRWVLVELGGNDGLRG----------FPP----QQTEQTLRQIIQDVKAANAQPLLMQIRLPA-----NY--------- 122 (191)
T ss_pred CCCEEEEEeccCcCccC----------CCH----HHHHHHHHHHHHHHHHcCCCEEEEEeecCC-----cc---------
Confidence 34889999999997421 122 4566777888888888888876653 2222 10
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
. ..+++.+.+.++++.+++ ++.++|.+.....
T Consensus 123 --~-------~~~~~~~~~~~~~~a~~~---~v~~id~~~~~~~------------------------------------ 154 (191)
T PRK10528 123 --G-------RRYNEAFSAIYPKLAKEF---DIPLLPFFMEEVY------------------------------------ 154 (191)
T ss_pred --c-------HHHHHHHHHHHHHHHHHh---CCCccHHHHHhhc------------------------------------
Confidence 0 112333444445555554 2556665411100
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHhccc
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIVQGF 283 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~~ 283 (286)
...+++..|++||+++||+.+|+.+.+-..
T Consensus 155 ---~~~~~~~~DGiHpn~~Gy~~~A~~i~~~l~ 184 (191)
T PRK10528 155 ---LKPQWMQDDGIHPNRDAQPFIADWMAKQLQ 184 (191)
T ss_pred ---cCHhhcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 011235579999999999999999987543
No 28
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.60 E-value=2.1e-07 Score=78.70 Aligned_cols=133 Identities=11% Similarity=0.046 Sum_probs=81.1
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 171 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~ 171 (286)
.-++++|.+|.||....... .... .+...+++.+.|+++.+.|++ +++++.||... .. .
T Consensus 65 ~pdlVii~~G~ND~~~~~~~-----~~~~----~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~-------~~----~ 123 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKDPE-----YTEP----YTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT-------FD----E 123 (198)
T ss_pred CCCEEEEECCCCCCCCCCCC-----CCCc----HHHHHHHHHHHHHHHHHCCCe-EEEECCccccc-------cC----C
Confidence 35899999999998542100 0012 345677788888888888886 55555444211 10 0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCcc
Q 023164 172 CVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGT 251 (286)
Q Consensus 172 c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~ 251 (286)
+ ...+.....||+.+++..++. .+.++|.+..+.+..+.-..-+ .. .. .
T Consensus 124 ~-~~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~~~---~~-------------------~~-~ 172 (198)
T cd01821 124 G-GKVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGPEK---SK-------------------KY-F 172 (198)
T ss_pred C-CcccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhChHh---HH-------------------hh-C
Confidence 0 022334567777777665532 4778999999887654211000 00 00 0
Q ss_pred CCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 252 CSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 252 C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
.++..|++||+++||++||+.+++.
T Consensus 173 -----~~~~~DgvHp~~~G~~~~a~~i~~~ 197 (198)
T cd01821 173 -----PEGPGDNTHFSEKGADVVARLVAEE 197 (198)
T ss_pred -----cCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 2345699999999999999998763
No 29
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.60 E-value=4.7e-07 Score=75.41 Aligned_cols=117 Identities=17% Similarity=0.258 Sum_probs=76.8
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCC-CccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPL-GCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lppl-gc~P~~~~~~~~~~~ 170 (286)
.-++++|.+|.||.... . .++ +++.+++...|+++...++ +++++++||. +..|.
T Consensus 67 ~~d~vii~~G~ND~~~~----~-----~~~----~~~~~~~~~~i~~i~~~~~-~vil~~~~~~~~~~~~---------- 122 (185)
T cd01832 67 RPDLVTLLAGGNDILRP----G-----TDP----DTYRADLEEAVRRLRAAGA-RVVVFTIPDPAVLEPF---------- 122 (185)
T ss_pred CCCEEEEeccccccccC----C-----CCH----HHHHHHHHHHHHHHHhCCC-EEEEecCCCccccchh----------
Confidence 44799999999998530 0 123 3456667777777776677 5888888886 32221
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
....++....+|+.|++..++ .++.++|++..+. +.
T Consensus 123 --~~~~~~~~~~~n~~l~~~a~~-------~~v~~vd~~~~~~------------------~~----------------- 158 (185)
T cd01832 123 --RRRVRARLAAYNAVIRAVAAR-------YGAVHVDLWEHPE------------------FA----------------- 158 (185)
T ss_pred --HHHHHHHHHHHHHHHHHHHHH-------cCCEEEecccCcc------------------cC-----------------
Confidence 112344577888888776553 2578899875432 00
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
. .+++.-|++||+++||+++|+.+++
T Consensus 159 ---~-~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 159 ---D-PRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred ---C-ccccccCCCCCChhHHHHHHHHHhh
Confidence 0 0112349999999999999999875
No 30
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.53 E-value=1.9e-06 Score=71.06 Aligned_cols=112 Identities=16% Similarity=0.286 Sum_probs=66.5
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 171 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~ 171 (286)
.-++++|.+|.||..... ++ +...+++.+.++++.+.|++ ++++++|. |... +
T Consensus 64 ~pd~v~i~~G~ND~~~~~----------~~----~~~~~~l~~li~~~~~~~~~-vil~~~~~----~~~~--------~ 116 (177)
T cd01822 64 KPDLVILELGGNDGLRGI----------PP----DQTRANLRQMIETAQARGAP-VLLVGMQA----PPNY--------G 116 (177)
T ss_pred CCCEEEEeccCcccccCC----------CH----HHHHHHHHHHHHHHHHCCCe-EEEEecCC----CCcc--------c
Confidence 447999999999975311 22 34566777788888878776 66656432 1110 0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCcc
Q 023164 172 CVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGT 251 (286)
Q Consensus 172 c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~~ 251 (286)
......+|+.+++. .+++ ++.++|.+ +..+..+
T Consensus 117 -----~~~~~~~~~~~~~~----a~~~---~~~~~d~~--~~~~~~~--------------------------------- 149 (177)
T cd01822 117 -----PRYTRRFAAIYPEL----AEEY---GVPLVPFF--LEGVAGD--------------------------------- 149 (177)
T ss_pred -----hHHHHHHHHHHHHH----HHHc---CCcEechH--HhhhhhC---------------------------------
Confidence 11234566665554 3332 34566653 1111111
Q ss_pred CCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 252 CSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 252 C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
.+++.-|++||+++||++||+.+.+.
T Consensus 150 ----~~~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 150 ----PELMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred ----hhhhCCCCCCcCHHHHHHHHHHHHHh
Confidence 11244699999999999999998764
No 31
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.51 E-value=3.9e-07 Score=76.01 Aligned_cols=129 Identities=14% Similarity=0.082 Sum_probs=78.2
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhh-CCcEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGL-GARKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~-Gar~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|.+|.||..... .+. +...+++...|+++.+. ...++++++.||....+..
T Consensus 56 ~pd~Vii~~G~ND~~~~~---------~~~----~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~--------- 113 (189)
T cd01825 56 PPDLVILSYGTNEAFNKQ---------LNA----SEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA--------- 113 (189)
T ss_pred CCCEEEEECCCcccccCC---------CCH----HHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC---------
Confidence 347899999999975311 122 45667777888888774 4556888887764322210
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
+....+.....+|+.+++..+ +. .+.++|.+..+.+. |+.
T Consensus 114 -~~~~~~~~~~~~~~~~~~~a~----~~---~v~~vd~~~~~~~~----------------~~~---------------- 153 (189)
T cd01825 114 -GRWRTPPGLDAVIAAQRRVAK----EE---GIAFWDLYAAMGGE----------------GGI---------------- 153 (189)
T ss_pred -CCcccCCcHHHHHHHHHHHHH----Hc---CCeEEeHHHHhCCc----------------chh----------------
Confidence 111122334566666655543 32 37789998875331 110
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHhcc
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIVQG 282 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~~ 282 (286)
.......++..|++|||++||++||+.+.+..
T Consensus 154 ~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~i 185 (189)
T cd01825 154 WQWAEPGLARKDYVHLTPRGYERLANLLYEAL 185 (189)
T ss_pred hHhhcccccCCCcccCCcchHHHHHHHHHHHH
Confidence 01111234567999999999999999998653
No 32
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.44 E-value=2.8e-06 Score=70.56 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=72.3
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCC-cEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
.-++++|.+|+||... . ....+++...|++|.+.+- .++++++.||. |..... .
T Consensus 57 ~pd~vii~~G~ND~~~-------------~----~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~-----~ 111 (177)
T cd01844 57 PADLYIIDCGPNIVGA-------------E----AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELT-----P 111 (177)
T ss_pred CCCEEEEEeccCCCcc-------------H----HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccC-----c
Confidence 4589999999999632 0 1467778888888887654 46777777664 322111 1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
......++....+| +.++++.++ ...++.++|.+.++.. .
T Consensus 112 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~~v~~id~~~~~~~----~------------------------------- 151 (177)
T cd01844 112 GRGKLTLAVRRALR----EAFEKLRAD-GVPNLYYLDGEELLGP----D------------------------------- 151 (177)
T ss_pred chhHHHHHHHHHHH----HHHHHHHhc-CCCCEEEecchhhcCC----C-------------------------------
Confidence 11223333444444 444444432 2347889997644311 0
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
.-++.|++|||++||+++|+.+.+
T Consensus 152 ------~~~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 152 ------GEALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred ------CCCCCCCCCCCHHHHHHHHHHHhh
Confidence 014569999999999999999875
No 33
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.27 E-value=8.1e-06 Score=67.25 Aligned_cols=22 Identities=32% Similarity=0.342 Sum_probs=19.9
Q ss_pred ecCCCChhHHHHHHHHHHHHhc
Q 023164 260 FWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 260 fwD~~HPT~~~h~~iA~~~~~~ 281 (286)
+.|++||++++|++||+.+++-
T Consensus 146 ~~DgiHPn~~G~~~iA~~l~~~ 167 (169)
T cd01831 146 IGCDWHPTVAGHQKIAKHLLPA 167 (169)
T ss_pred cCCCCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999998864
No 34
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.27 E-value=4.8e-06 Score=67.40 Aligned_cols=22 Identities=27% Similarity=0.437 Sum_probs=19.6
Q ss_pred eecCCCChhHHHHHHHHHHHHh
Q 023164 259 VFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 259 lfwD~~HPT~~~h~~iA~~~~~ 280 (286)
+..|++||+++||+++|+.+.+
T Consensus 127 ~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 127 FYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hcCCCCCCChhhHHHHHHHHHH
Confidence 4469999999999999999876
No 35
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.25 E-value=1.5e-05 Score=71.25 Aligned_cols=149 Identities=17% Similarity=0.160 Sum_probs=82.8
Q ss_pred ceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCc--EEEEccCCCCCcc---------ccch
Q 023164 94 AIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGAR--KFGVTSLPPLGCL---------PAAR 162 (286)
Q Consensus 94 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar--~~~v~~lpplgc~---------P~~~ 162 (286)
.+++|.+|+||..... .+. ....+ ++..-+++.+.++.|.+..-+ +++++++|++..+ |...
T Consensus 124 ~lVtI~lGgND~C~g~-~d~--~~~tp----~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hplg~ 196 (305)
T cd01826 124 ALVIYSMIGNDVCNGP-NDT--INHTT----PEEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHPIGQ 196 (305)
T ss_pred eEEEEEeccchhhcCC-Ccc--ccCcC----HHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhccccccchh
Confidence 7888899999997531 111 11122 345667788888999888644 8999999984221 0000
Q ss_pred -----hc---cCC----CCCCcc------hHHHHHHHHHHHHHHHHHHHHHH--hCCCCcEEEEeccHHHHHHhhCCCCC
Q 023164 163 -----TL---FGY----HESGCV------SRINTDAQQFNKKVSSAATNLQK--QLPDLKIVIFDIFKPIYDLVQSPSKS 222 (286)
Q Consensus 163 -----~~---~~~----~~~~c~------~~~n~~~~~fN~~L~~~l~~l~~--~~~~~~i~~~D~~~~~~~i~~nP~~y 222 (286)
+. +.. .-..|. +...++...+=++|..+..++.+ ++...++.+.|+. +..+.....+.
T Consensus 197 ~~~~vty~~~y~~lncl~~spC~gw~~~n~t~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~~~~~~ 274 (305)
T cd01826 197 LNKDVTYPNLYDYLNCLQVSPCWGWLNSNETLRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVDMWIAF 274 (305)
T ss_pred cccccchhhhhhhhcccccCCccccccccccchhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhhHHHhc
Confidence 00 000 012343 22233334444444444444443 2345677777763 33433332221
Q ss_pred CccccCcccccCcccCCcccccCCCCCccCCCCCCcee-cCCCChhHHHHHHHHHHHHh
Q 023164 223 GFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVF-WDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 223 Gf~~~~~aCc~~g~~~~~~~~C~~~~~~~C~~p~~ylf-wD~~HPT~~~h~~iA~~~~~ 280 (286)
|- .+-+++. -|++||++.+|.++|+.+|+
T Consensus 275 g~-----------------------------~~~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 275 GG-----------------------------QTWQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred CC-----------------------------CchhhcccccCCCccHHHHHHHHHHhhc
Confidence 10 1233455 69999999999999999985
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=97.87 E-value=7e-05 Score=63.21 Aligned_cols=134 Identities=14% Similarity=0.214 Sum_probs=88.7
Q ss_pred ccceEEEEecchhHhhhhhcCCcc-CccCChHhhHHHHHHHHHHHHHHHHhhC-CcEEEEccCCCCCccccchhccCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLL-NKVYTPEQYSSMLVNIFSSFIKNMYGLG-ARKFGVTSLPPLGCLPAARTLFGYHE 169 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~-~~~~~~~~~v~~~v~~~~~~v~~L~~~G-ar~~~v~~lpplgc~P~~~~~~~~~~ 169 (286)
+-.+++|.+|+||-... .+.. ..-... ++-++++.+.++-|...- -.++++++-||+...-..... .
T Consensus 68 ~p~lvtVffGaNDs~l~---~~~~~~~hvPl----~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~----~ 136 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLP---EPSSLGQHVPL----EEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQE----Q 136 (245)
T ss_pred CceEEEEEecCccccCC---CCCCCCCccCH----HHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHh----c
Confidence 55889999999997532 1111 111223 445667777777776654 346788887777654333222 1
Q ss_pred CCcch---HHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCC
Q 023164 170 SGCVS---RINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNP 246 (286)
Q Consensus 170 ~~c~~---~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~ 246 (286)
..|.. +.|+.+..|++.+.+..+++ ++..+|.++.+++.-
T Consensus 137 e~~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~~------------------------------ 179 (245)
T KOG3035|consen 137 EPYVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQESD------------------------------ 179 (245)
T ss_pred cchhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhcc------------------------------
Confidence 23433 58999999999998877654 566788887776610
Q ss_pred CCCccCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 247 KSPGTCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 247 ~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
|-.+-.||||+|.|..|++++++.++.
T Consensus 180 -------dw~~~~ltDGLHlS~~G~~ivf~Ei~k 206 (245)
T KOG3035|consen 180 -------DWQTSCLTDGLHLSPKGNKIVFDEILK 206 (245)
T ss_pred -------cHHHHHhccceeeccccchhhHHHHHH
Confidence 111125899999999999999999876
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=97.55 E-value=0.00083 Score=57.28 Aligned_cols=24 Identities=25% Similarity=0.266 Sum_probs=21.3
Q ss_pred cCCCChhHHHHHHHHHHHHhcccc
Q 023164 261 WDSVHPSQAANQVIADELIVQGFA 284 (286)
Q Consensus 261 wD~~HPT~~~h~~iA~~~~~~~~~ 284 (286)
+|++||+.++|+.+|+.+.+...+
T Consensus 187 ~Dg~H~n~~Gy~~~a~~l~~~l~~ 210 (216)
T COG2755 187 EDGLHPNAKGYQALAEALAEVLAK 210 (216)
T ss_pred CCCCCcCHhhHHHHHHHHHHHHHH
Confidence 899999999999999999876543
No 38
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.87 E-value=0.0052 Score=55.11 Aligned_cols=137 Identities=20% Similarity=0.235 Sum_probs=81.5
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCC---cEEEEccCCCCCccccchhccCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA---RKFGVTSLPPLGCLPAARTLFGYH 168 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga---r~~~v~~lpplgc~P~~~~~~~~~ 168 (286)
.-+.++|.+|.||.......+ ......+ +.-.+.+.+.|.+|.+.-. -+++.+++|++-
T Consensus 177 ~~a~vVV~lGaND~q~~~~gd-~~~kf~S-----~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r------------ 238 (354)
T COG2845 177 KPAAVVVMLGANDRQDFKVGD-VYEKFRS-----DEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR------------ 238 (354)
T ss_pred CccEEEEEecCCCHHhcccCC-eeeecCc-----hHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc------------
Confidence 446778899999998754332 1111111 3455666666666665433 367888988841
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCC
Q 023164 169 ESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKS 248 (286)
Q Consensus 169 ~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~ 248 (286)
.+.+|+-..++|...++.++.+.. + ++|+++.+-+ .+... |.. .|. .
T Consensus 239 ----~~~l~~dm~~ln~iy~~~vE~~~g-----k--~i~i~d~~v~---e~G~~-f~~-------~~~----------D- 285 (354)
T COG2845 239 ----KKKLNADMVYLNKIYSKAVEKLGG-----K--FIDIWDGFVD---EGGKD-FVT-------TGV----------D- 285 (354)
T ss_pred ----ccccchHHHHHHHHHHHHHHHhCC-----e--EEEecccccc---cCCce-eEE-------ecc----------c-
Confidence 345777788999999998887642 2 3555544322 11110 100 000 0
Q ss_pred CccCCCCCCceecCCCChhHHHHHHHHHHHHhc
Q 023164 249 PGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 281 (286)
Q Consensus 249 ~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 281 (286)
.-..+-.+--=||+|.|.+|-+.+|.++.+-
T Consensus 286 --~NGq~vrlR~~DGIh~T~~Gkrkla~~~~k~ 316 (354)
T COG2845 286 --INGQPVRLRAKDGIHFTKEGKRKLAFYLEKP 316 (354)
T ss_pred --cCCceEEEeccCCceechhhHHHHHHHHHHH
Confidence 0011223344599999999999999998753
No 39
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.82 E-value=0.012 Score=48.89 Aligned_cols=116 Identities=20% Similarity=0.255 Sum_probs=50.0
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhC-CcEEEEccCCCCCccccchhccCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLG-ARKFGVTSLPPLGCLPAARTLFGYHES 170 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~G-ar~~~v~~lpplgc~P~~~~~~~~~~~ 170 (286)
+.++|++..|.| + +++ .+.+++...|++|.+.- -.-|+++...+- |. .
T Consensus 59 ~a~~~~ld~~~N-----~----------~~~----~~~~~~~~fv~~iR~~hP~tPIllv~~~~~---~~---------~ 107 (178)
T PF14606_consen 59 DADLIVLDCGPN-----M----------SPE----EFRERLDGFVKTIREAHPDTPILLVSPIPY---PA---------G 107 (178)
T ss_dssp --SEEEEEESHH-----C----------CTT----THHHHHHHHHHHHHTT-SSS-EEEEE-------TT---------T
T ss_pred CCCEEEEEeecC-----C----------CHH----HHHHHHHHHHHHHHHhCCCCCEEEEecCCc---cc---------c
Confidence 449999999999 1 122 24455666677776543 455665553221 11 1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcccCCcccccCCCCCc
Q 023164 171 GCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPG 250 (286)
Q Consensus 171 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~~~~~~~~C~~~~~~ 250 (286)
............+|+.+++.+++++++ .+-+++|++-..++-+-
T Consensus 108 ~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~d----------------------------------- 151 (178)
T PF14606_consen 108 YFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGDD----------------------------------- 151 (178)
T ss_dssp TS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS--------------------------------------
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCcc-----------------------------------
Confidence 112223345789999999999999765 46789998876654220
Q ss_pred cCCCCCCceecCCCChhHHHHHHHHHHHHh
Q 023164 251 TCSNASQYVFWDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 251 ~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 280 (286)
.-..-|++|||..||..+|+.+..
T Consensus 152 ------~e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 152 ------HEATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp ------------------------------
T ss_pred ------cccccccccccccccccccccccc
Confidence 002359999999999999998753
No 40
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=96.61 E-value=0.059 Score=49.83 Aligned_cols=82 Identities=13% Similarity=0.053 Sum_probs=48.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhCchhHHhhhccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHh
Q 023164 62 ISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG 141 (286)
Q Consensus 62 ~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~ 141 (286)
-+|..|-+... +++++..+-. -...=.|+.||||+||+-. +-..+. +....++.-..+|.++++.|.+
T Consensus 160 ~Dlp~QAr~Lv---~rik~~~~i~---~~~dWKLi~IfIG~ND~c~-~c~~~~-----~~~~~~~~~~~~i~~Al~~L~~ 227 (397)
T KOG3670|consen 160 EDLPDQARDLV---SRIKKDKEIN---MKNDWKLITIFIGTNDLCA-YCEGPE-----TPPSPVDQHKRNIRKALEILRD 227 (397)
T ss_pred hhhHHHHHHHH---HHHHhccCcc---cccceEEEEEEeccchhhh-hccCCC-----CCCCchhHHHHHHHHHHHHHHh
Confidence 46777776553 3444333311 0112368899999999986 322211 2223345566788999999998
Q ss_pred hCCcEEEE-ccCCCC
Q 023164 142 LGARKFGV-TSLPPL 155 (286)
Q Consensus 142 ~Gar~~~v-~~lppl 155 (286)
.=-|.+|+ ++.+++
T Consensus 228 nvPR~iV~lvg~~~~ 242 (397)
T KOG3670|consen 228 NVPRTIVSLVGMFNV 242 (397)
T ss_pred cCCceEEEEecCCCH
Confidence 87787764 444443
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.57 E-value=1.2 Score=37.10 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=18.3
Q ss_pred cCCCChhHHHHHHHHHHHHh
Q 023164 261 WDSVHPSQAANQVIADELIV 280 (286)
Q Consensus 261 wD~~HPT~~~h~~iA~~~~~ 280 (286)
.|++|+++.+|+.+++.++.
T Consensus 161 ~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHH
Confidence 59999999999999998874
No 42
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=94.15 E-value=0.034 Score=50.99 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=50.4
Q ss_pred hccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhc
Q 023164 91 IKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTL 164 (286)
Q Consensus 91 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~ 164 (286)
..+.++.-|+|+||+...-.. ....+.-..+......+..++-.++.++.-+|+..+.|.++..|.....
T Consensus 97 ~~~~~~~~~a~gnd~A~gga~----~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~ 166 (370)
T COG3240 97 DPNGLYIHWAGGNDLAVGGAR----STEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYF 166 (370)
T ss_pred CcccccCcccccccHhhhccc----cccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHH
Confidence 467888999999999764321 1111101223345566778889999999999999999999999988753
No 43
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=86.54 E-value=4.5 Score=35.67 Aligned_cols=139 Identities=14% Similarity=0.173 Sum_probs=81.3
Q ss_pred hhccceEEEEecchhHhhhhhcCC-------ccCccCChH------hhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCC
Q 023164 90 IIKDAIYIVGSGSGDFLQNYYVNP-------LLNKVYTPE------QYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLG 156 (286)
Q Consensus 90 ~~~~sL~~i~iG~ND~~~~~~~~~-------~~~~~~~~~------~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg 156 (286)
+.+-++++|..|..-.+..-..+. ......+.+ --++++++.+...++.|....-.-=+|+++.|+
T Consensus 99 l~~ad~~iiTLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV- 177 (251)
T PF08885_consen 99 LEEADVFIITLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPV- 177 (251)
T ss_pred HHhCCEEEEeCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccc-
Confidence 346688899999988754211000 001111221 134667777888888888776654577888886
Q ss_pred ccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHhhCCCCCCccccCcccccCcc
Q 023164 157 CLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGT 236 (286)
Q Consensus 157 c~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCc~~g~ 236 (286)
|...+... .-.-..|..++ +.|+..+.++.++++ ++.||=.|.++++-+.++.-|
T Consensus 178 --rl~~T~~~----~d~~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~d~lrdyrfy-------------- 232 (251)
T PF08885_consen 178 --RLIATFRD----RDGLVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVMDELRDYRFY-------------- 232 (251)
T ss_pred --hhhccccc----ccchhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhccCcccccccc--------------
Confidence 54443211 11122343332 457777788877653 677888887776533322111
Q ss_pred cCCcccccCCCCCccCCCCCCceecCCCChhHHHHHHHHHH
Q 023164 237 VETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADE 277 (286)
Q Consensus 237 ~~~~~~~C~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~ 277 (286)
==|..||++.+-..+.+.
T Consensus 233 -----------------------~~D~~Hps~~aV~~I~~~ 250 (251)
T PF08885_consen 233 -----------------------AEDMRHPSPQAVDYIWER 250 (251)
T ss_pred -----------------------cccCCCCCHHHHHHHHhh
Confidence 128999999998887765
No 44
>PLN02757 sirohydrochlorine ferrochelatase
Probab=76.90 E-value=7.5 Score=31.53 Aligned_cols=63 Identities=14% Similarity=0.224 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEe---c
Q 023164 132 FSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFD---I 208 (286)
Q Consensus 132 ~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D---~ 208 (286)
+.+.|++|.+.|+|+|+| .|+++... ......+.+.++++++++|+.+|.+.. .
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G---------------~H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~ 116 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPG---------------RHWQEDIPALTAEAAKEHPGVKYLVTAPIGL 116 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCC---------------cchHhHHHHHHHHHHHHCCCcEEEECCCCCC
Confidence 345567788889999988 47776532 122345677888899999999998765 3
Q ss_pred cHHHHHHhh
Q 023164 209 FKPIYDLVQ 217 (286)
Q Consensus 209 ~~~~~~i~~ 217 (286)
+..+.+++.
T Consensus 117 ~p~l~~ll~ 125 (154)
T PLN02757 117 HELMVDVVN 125 (154)
T ss_pred CHHHHHHHH
Confidence 445555554
No 45
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=76.13 E-value=14 Score=31.92 Aligned_cols=84 Identities=15% Similarity=0.328 Sum_probs=48.7
Q ss_pred EEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHH
Q 023164 97 IVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRI 176 (286)
Q Consensus 97 ~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~ 176 (286)
.|+.|.+.....|. .+. ...+ +.+..-+.+.++.|...|.||++|+|- . ++
T Consensus 61 ~i~yG~s~~h~~fp--GTi--sl~~----~t~~~~l~di~~sl~~~Gf~~ivivng------------H----gG----- 111 (237)
T PF02633_consen 61 PIPYGCSPHHMGFP--GTI--SLSP----ETLIALLRDILRSLARHGFRRIVIVNG------------H----GG----- 111 (237)
T ss_dssp -B--BB-GCCTTST--T-B--BB-H----HHHHHHHHHHHHHHHHHT--EEEEEES------------S----TT-----
T ss_pred CCccccCcccCCCC--CeE--EeCH----HHHHHHHHHHHHHHHHcCCCEEEEEEC------------C----Hh-----
Confidence 35778888765442 111 1123 334455667788899999999999882 1 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHH
Q 023164 177 NTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDL 215 (286)
Q Consensus 177 n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 215 (286)
| ...|...+++++.++++.++.++|.+.+....
T Consensus 112 N------~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 112 N------IAALEAAARELRQEYPGVKVFVINWWQLAEDE 144 (237)
T ss_dssp H------HHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCH
T ss_pred H------HHHHHHHHHHHHhhCCCcEEEEeechhccchh
Confidence 1 12355666777777789999999998886654
No 46
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=71.03 E-value=11 Score=34.14 Aligned_cols=66 Identities=18% Similarity=0.327 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 023164 127 MLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIF 206 (286)
Q Consensus 127 ~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~ 206 (286)
.-++.+.+.++++.++|.+.|++++++| |......+ .+..+. |.-+.+.++.+++++|+. +++.
T Consensus 51 ~s~d~l~~~v~~~~~~Gi~~v~lFgv~~----~~~KD~~g------s~A~~~-----~g~v~~air~iK~~~p~l-~vi~ 114 (320)
T cd04823 51 LSIDELLKEAEEAVDLGIPAVALFPVTP----PELKSEDG------SEAYNP-----DNLVCRAIRAIKEAFPEL-GIIT 114 (320)
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEecCCC----cccCCccc------ccccCC-----CChHHHHHHHHHHhCCCc-EEEE
Confidence 3567888889999999999999999854 22222211 111111 234556777788888875 4455
Q ss_pred ec
Q 023164 207 DI 208 (286)
Q Consensus 207 D~ 208 (286)
|+
T Consensus 115 DV 116 (320)
T cd04823 115 DV 116 (320)
T ss_pred ee
Confidence 65
No 47
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=67.42 E-value=8.9 Score=34.72 Aligned_cols=66 Identities=18% Similarity=0.266 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhhCCcEEEEccCCCCC-ccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 023164 127 MLVNIFSSFIKNMYGLGARKFGVTSLPPLG-CLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVI 205 (286)
Q Consensus 127 ~~v~~~~~~v~~L~~~Gar~~~v~~lpplg-c~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~ 205 (286)
.-++.+.+.++++.++|.+.|+++++|+-. .-+.. + .+.. .=|.-+.+.++.+++++|+. +++
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~----g------s~a~-----~~~g~v~~air~iK~~~pdl-~vi 111 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRS----G------SAAD-----DEDGPVIQAIKLIREEFPEL-LIA 111 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCc----c------cccc-----CCCChHHHHHHHHHHhCCCc-EEE
Confidence 346778888999999999999999997521 22210 0 0011 11233456677778888875 445
Q ss_pred Eec
Q 023164 206 FDI 208 (286)
Q Consensus 206 ~D~ 208 (286)
.|+
T Consensus 112 ~Dv 114 (320)
T cd04824 112 CDV 114 (320)
T ss_pred Eee
Confidence 565
No 48
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=65.07 E-value=27 Score=31.72 Aligned_cols=64 Identities=19% Similarity=0.301 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 023164 127 MLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIF 206 (286)
Q Consensus 127 ~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~ 206 (286)
.-++.+.+.++++.++|.+.|+++++|+. ....+ .+..+. |.-+.+.++.+++.+|+.- ++.
T Consensus 58 ~sid~l~~~~~~~~~~Gi~~v~lFgv~~~------Kd~~g------s~A~~~-----~g~v~~air~iK~~~pdl~-vi~ 119 (322)
T PRK13384 58 LPESALADEIERLYALGIRYVMPFGISHH------KDAKG------SDTWDD-----NGLLARMVRTIKAAVPEMM-VIP 119 (322)
T ss_pred ECHHHHHHHHHHHHHcCCCEEEEeCCCCC------CCCCc------ccccCC-----CChHHHHHHHHHHHCCCeE-EEe
Confidence 34677888899999999999999999642 22111 111111 3445667788888888763 455
Q ss_pred ec
Q 023164 207 DI 208 (286)
Q Consensus 207 D~ 208 (286)
|+
T Consensus 120 DV 121 (322)
T PRK13384 120 DI 121 (322)
T ss_pred ee
Confidence 65
No 49
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=62.96 E-value=33 Score=31.08 Aligned_cols=64 Identities=20% Similarity=0.367 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 023164 127 MLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIF 206 (286)
Q Consensus 127 ~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~ 206 (286)
.-++.+.+.++++.++|.+.|+++++|.. ....+ .+..|. |.-+.+.++.+++++|+. +++.
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~------Kd~~g------s~A~~~-----~g~v~~air~iK~~~p~l-~vi~ 109 (314)
T cd00384 48 LSVDSLVEEAEELADLGIRAVILFGIPEH------KDEIG------SEAYDP-----DGIVQRAIRAIKEAVPEL-VVIT 109 (314)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCCC------CCCCc------ccccCC-----CChHHHHHHHHHHhCCCc-EEEE
Confidence 45678888999999999999999999642 11111 111111 234556677788888875 3455
Q ss_pred ec
Q 023164 207 DI 208 (286)
Q Consensus 207 D~ 208 (286)
|+
T Consensus 110 Dv 111 (314)
T cd00384 110 DV 111 (314)
T ss_pred ee
Confidence 65
No 50
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=62.27 E-value=22 Score=32.43 Aligned_cols=65 Identities=23% Similarity=0.330 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEe
Q 023164 128 LVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFD 207 (286)
Q Consensus 128 ~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D 207 (286)
-++.+.+.++++.++|.+.|+++++.+ |......+ ....| =|.-+.+.++.+++.+|+. +++.|
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~g------s~a~~-----~~g~v~~air~iK~~~pdl-~vi~D 118 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEEG------SEAYN-----PDGLVQRAIRAIKKAFPDL-LVITD 118 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS-------GGGGS-----TTSHHHHHHHHHHHHSTTS-EEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcch------hcccC-----CCChHHHHHHHHHHhCCCc-EEEEe
Confidence 457778889999999999999999854 33333221 11111 1233456677888888885 55666
Q ss_pred c
Q 023164 208 I 208 (286)
Q Consensus 208 ~ 208 (286)
+
T Consensus 119 v 119 (324)
T PF00490_consen 119 V 119 (324)
T ss_dssp E
T ss_pred c
Confidence 5
No 51
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=61.93 E-value=18 Score=26.61 Aligned_cols=51 Identities=14% Similarity=0.180 Sum_probs=33.1
Q ss_pred HHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEe
Q 023164 134 SFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFD 207 (286)
Q Consensus 134 ~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D 207 (286)
+.+++|.+.|+++++|. |.++... ......+...+++++.++++.++.+.+
T Consensus 48 ~~l~~l~~~g~~~v~vv--------Plfl~~G---------------~h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 48 EALDELAAQGATRIVVV--------PLFLLAG---------------GHVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHcCCCEEEEE--------eeEeCCC---------------ccccccHHHHHHHHHHHCCCeEEEecC
Confidence 45677888899999883 6565431 122234556666677778888887754
No 52
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=58.76 E-value=25 Score=32.01 Aligned_cols=64 Identities=22% Similarity=0.346 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 023164 127 MLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIF 206 (286)
Q Consensus 127 ~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~ 206 (286)
.-++.+.+.++++.++|.+.|+++++|.. ....+ .+..+. |.-+.+.++.+++++|+. +++.
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~------Kd~~g------s~A~~~-----~g~v~rair~iK~~~p~l-~vi~ 117 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL------KDEDG------SEAYNP-----DGLVQRAIRAIKKAFPEL-GVIT 117 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC------CCccc------ccccCC-----CCHHHHHHHHHHHhCCCc-EEEE
Confidence 34677888899999999999999998432 22211 111111 334556778888888875 4455
Q ss_pred ec
Q 023164 207 DI 208 (286)
Q Consensus 207 D~ 208 (286)
|+
T Consensus 118 DV 119 (323)
T PRK09283 118 DV 119 (323)
T ss_pred ee
Confidence 65
No 53
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=54.81 E-value=9.2 Score=28.31 Aligned_cols=52 Identities=13% Similarity=0.213 Sum_probs=34.4
Q ss_pred HHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Q 023164 134 SFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDI 208 (286)
Q Consensus 134 ~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~ 208 (286)
+.+++|.+.|+++|+|+ |.++... ......+.+.++.++.++|+.++.+...
T Consensus 41 ~~l~~l~~~g~~~ivvv--------P~fL~~G---------------~h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 41 EALERLVAQGARRIVVV--------PYFLFPG---------------YHVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp HCCHHHHCCTCSEEEEE--------EESSSSS---------------HHHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHHHHHcCCCeEEEE--------eeeecCc---------------cchHhHHHHHHHHHHhhCCceEEEECCC
Confidence 34578888899999884 6665431 1222336778888899999888887654
No 54
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=51.99 E-value=25 Score=31.22 Aligned_cols=93 Identities=22% Similarity=0.241 Sum_probs=54.9
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 171 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~ 171 (286)
++-+|-++|--||--.. + ..+......-=+.++.+.+..|.+.|.|.+++++++| |......+ .
T Consensus 39 ~nliyPlFI~e~~dd~~----p----I~SmPg~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~----~~~Kd~~g----s 102 (340)
T KOG2794|consen 39 ANLIYPLFIHEGEDDFT----P----IDSMPGIYRLGVNRLKEELAPLVAKGLRSVILFGVVP----EALKDPTG----S 102 (340)
T ss_pred hheeeeEEEecCccccc----c----cccCCchhHHHHHHHHHHHHHHHHhccceEEEecCCC----ccccCccc----c
Confidence 55667777766654210 1 0011122233466788999999999999999999986 43333211 1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Q 023164 172 CVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDI 208 (286)
Q Consensus 172 c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~ 208 (286)
. +..=|.-.-..+..|+..+|+. +++.|+
T Consensus 103 ---~----Ads~~gpvi~ai~~lr~~fPdL-~i~cDV 131 (340)
T KOG2794|consen 103 ---E----ADSDNGPVIRAIRLLRDRFPDL-VIACDV 131 (340)
T ss_pred ---c----ccCCCCcHHHHHHHHHHhCcce-EEEeee
Confidence 1 1111233345677888889986 556665
No 55
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=49.37 E-value=1.7e+02 Score=25.00 Aligned_cols=114 Identities=11% Similarity=0.209 Sum_probs=59.6
Q ss_pred ccceEEEEecchhHhhhhhcCCc-cCccCChHhhHHHHHHHHHHHHHHHHhhCC--cEEEEccCCCCCccccchhccCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPL-LNKVYTPEQYSSMLVNIFSSFIKNMYGLGA--RKFGVTSLPPLGCLPAARTLFGYH 168 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~-~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga--r~~~v~~lpplgc~P~~~~~~~~~ 168 (286)
..++++|..|.-+.-........ .........| ...+..+.+.+.++.+... .++++.+++|...- .. ... .
T Consensus 100 ~pdvvV~nsG~W~~~~~~~~~~~~~~~~~~~~~y-~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~~--~~-~~~-~ 174 (263)
T PF13839_consen 100 RPDVVVINSGLWYLRRSGFIEWGDNKEINPLEAY-RNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHFE--GG-DWN-S 174 (263)
T ss_pred CCCEEEEEcchhhhhcchhcccCCCcCcchHHHH-HHHHHHHHHHHHhhhccccccceEEEEecCCcccc--cc-ccc-c
Confidence 67899999999998542211000 0001122233 3455566666666665554 66777776663221 00 000 0
Q ss_pred CCCcc-----hHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHHHHh
Q 023164 169 ESGCV-----SRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLV 216 (286)
Q Consensus 169 ~~~c~-----~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~ 216 (286)
.+.|. ...++.+..+|+.+...+ ..+.++.+.|++..+....
T Consensus 175 gg~c~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ldi~~~~~~~r 221 (263)
T PF13839_consen 175 GGSCNPPRREEITNEQIDELNEALREAL------KKNSRVHLLDIFTMLSSFR 221 (263)
T ss_pred CCCcCcccccCCCHHHHHHHHHHHHHHh------hcCCCceeeeecchhhhcc
Confidence 23444 123455666666666554 1467888999965554433
No 56
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=46.35 E-value=41 Score=30.44 Aligned_cols=67 Identities=18% Similarity=0.274 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 023164 126 SMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVI 205 (286)
Q Consensus 126 ~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~ 205 (286)
..-++.+.+.++++.++|.+.++++++|+ +......++ . +-.-|.-+.+.++.+++.+|+. +++
T Consensus 57 r~s~d~l~~~~~~~~~lGi~av~LFgvp~----~~~Kd~~gs------~-----A~~~~givqravr~ik~~~p~l-~ii 120 (330)
T COG0113 57 RYSLDRLVEEAEELVDLGIPAVILFGVPD----DSKKDETGS------E-----AYDPDGIVQRAVRAIKEAFPEL-VVI 120 (330)
T ss_pred eccHHHHHHHHHHHHhcCCCEEEEeCCCc----ccccCcccc------c-----ccCCCChHHHHHHHHHHhCCCe-EEE
Confidence 34577888889999999999999999997 222222111 0 1111234556677788888753 444
Q ss_pred Eec
Q 023164 206 FDI 208 (286)
Q Consensus 206 ~D~ 208 (286)
.|+
T Consensus 121 tDv 123 (330)
T COG0113 121 TDV 123 (330)
T ss_pred eee
Confidence 454
No 57
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=45.29 E-value=76 Score=23.77 Aligned_cols=51 Identities=18% Similarity=0.292 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEe
Q 023164 132 FSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFD 207 (286)
Q Consensus 132 ~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D 207 (286)
+.+.+++|.+.|+++++|. |.++... . .. +.+...+++++.+ |+.++.+..
T Consensus 47 ~~~~l~~l~~~g~~~i~vv--------P~fL~~G-----~----------h~-~~i~~~~~~~~~~-~~~~i~~~~ 97 (117)
T cd03414 47 LPEALERLRALGARRVVVL--------PYLLFTG-----V----------LM-DRIEEQVAELAAE-PGIEFVLAP 97 (117)
T ss_pred HHHHHHHHHHcCCCEEEEE--------echhcCC-----c----------hH-HHHHHHHHHHHhC-CCceEEECC
Confidence 3455677888999999883 5555421 0 11 2355566777766 777776643
No 58
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=40.52 E-value=26 Score=24.73 Aligned_cols=20 Identities=15% Similarity=0.238 Sum_probs=14.9
Q ss_pred HHHHHHHHhhCCcEEEEccC
Q 023164 133 SSFIKNMYGLGARKFGVTSL 152 (286)
Q Consensus 133 ~~~v~~L~~~Gar~~~v~~l 152 (286)
.+.+.+|.++||+.|+|..+
T Consensus 53 ~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 53 WDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHcCCCEEEEEec
Confidence 35568899999999999765
No 59
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=39.29 E-value=70 Score=28.87 Aligned_cols=51 Identities=10% Similarity=0.143 Sum_probs=25.8
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCC---hHhhHHHHHHHHHHHHHHHHhhC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYT---PEQYSSMLVNIFSSFIKNMYGLG 143 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~---~~~~v~~~v~~~~~~v~~L~~~G 143 (286)
.+-+=+++||.||+....+. ..|..... -..+-+.+..-+...++.-.+.|
T Consensus 195 ~~~~DF~SIGtNDLtQy~la-~DR~n~~v~~~~d~~~Pavl~li~~vi~~a~~~g 248 (293)
T PF02896_consen 195 AKEVDFFSIGTNDLTQYTLA-ADRDNARVAYLYDPLHPAVLRLIKQVIDAAHKAG 248 (293)
T ss_dssp HTTSSEEEEEHHHHHHHHHT-S-TTCCTCGGGS-TTSHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCEEEEChhHHHHHHhh-cCCCCcchhhhcCcchHHHHHHHHHHHHHHhhcC
Confidence 34466899999999874332 21211000 11223445555555555555555
No 60
>PF07555 NAGidase: beta-N-acetylglucosaminidase ; InterPro: IPR011496 This family consists of both eukaryotic and prokaryotic hyaluronidases. Human Q9HAR0 from SWISSPROT is expressed during meningioma []. Clostridium perfringens, P26831 from SWISSPROT, is involved in pathogenesis and is likely to act on connectivity tissue during gas gangrene []. It catalyses the random hydrolysis of 1->4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.; PDB: 2WB5_B 2V5C_B 2VUR_A 2V5D_A 2YDS_A 2CBI_A 2XPK_A 2CBJ_B 2J62_A 2X0Y_A ....
Probab=39.04 E-value=1.6e+02 Score=26.71 Aligned_cols=25 Identities=20% Similarity=0.428 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHhhCCcEEEEc
Q 023164 126 SMLVNIFSSFIKNMYGLGARKFGVT 150 (286)
Q Consensus 126 ~~~v~~~~~~v~~L~~~Gar~~~v~ 150 (286)
+.-++.+.+-++.|+++|+|.|.|+
T Consensus 87 ~~d~~~L~~K~~ql~~lGvr~Fail 111 (306)
T PF07555_consen 87 EEDFEALKAKFDQLYDLGVRSFAIL 111 (306)
T ss_dssp HHHHHHHHHHHHHHHCTT--EEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 3456667777899999999999876
No 61
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=37.54 E-value=82 Score=24.64 Aligned_cols=26 Identities=12% Similarity=0.194 Sum_probs=22.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhC
Q 023164 173 VSRINTDAQQFNKKVSSAATNLQKQL 198 (286)
Q Consensus 173 ~~~~n~~~~~fN~~L~~~l~~l~~~~ 198 (286)
.++.+.++..||..|.+.|+++.+++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678899999999999999999875
No 62
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=37.47 E-value=78 Score=29.55 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=57.3
Q ss_pred EEEEec-chhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcch
Q 023164 96 YIVGSG-SGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVS 174 (286)
Q Consensus 96 ~~i~iG-~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~ 174 (286)
=+|.|| ++|+.+..-...... . ....+.+...++++-+.+-..|++.|+-+..-.=.-+ .. ..
T Consensus 239 ~vi~IGKI~DI~~~~Git~~~~-~-------~~n~~~~d~tl~~~~~~~~~~~vFtNlVdfD~~yGHR-------rD-v~ 302 (397)
T COG1015 239 PVIAIGKIADIYAGQGITEKVK-A-------VSNMDGMDVTLEEMKTAEFNGLVFTNLVDFDSLYGHR-------RD-VA 302 (397)
T ss_pred ceEEEeeHHhhhcccccccccc-C-------CCcHHHHHHHHHHHhcCCCCcEEEEeeeecccccccc-------cc-hH
Confidence 356777 899876321111000 0 1223344455666666777789999998865332211 12 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Q 023164 175 RINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIF 209 (286)
Q Consensus 175 ~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~ 209 (286)
-+.+..+.|.++|.+.++.|+.. +.=|+..|--
T Consensus 303 gYa~aLe~FD~rL~e~~~~l~ed--DlLiiTADHG 335 (397)
T COG1015 303 GYAAALEEFDRRLPELIENLRED--DLLIITADHG 335 (397)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC--CEEEEecCCC
Confidence 45567889999999999988753 5666666653
No 63
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=36.04 E-value=1.1e+02 Score=21.55 Aligned_cols=61 Identities=23% Similarity=0.255 Sum_probs=30.5
Q ss_pred hCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHH---HHHHHHHHHHHHHHhCCCCcE
Q 023164 142 LGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQ---FNKKVSSAATNLQKQLPDLKI 203 (286)
Q Consensus 142 ~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~---fN~~L~~~l~~l~~~~~~~~i 203 (286)
-|||.++++.++=..-.|....... ...+.......--++ .-++|+++.+.|+++.|+.++
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~~-~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~ 72 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPPG-PGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEY 72 (78)
T ss_pred CCCcEEEEEEccCCCccccccccCC-CCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCe
Confidence 5899999998775441111111100 112233322221222 335677777777777777543
No 64
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=35.76 E-value=45 Score=24.91 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhhCCcEEEEccC
Q 023164 130 NIFSSFIKNMYGLGARKFGVTSL 152 (286)
Q Consensus 130 ~~~~~~v~~L~~~Gar~~~v~~l 152 (286)
+.+.+.+.+|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45667789999999999999764
No 65
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=35.20 E-value=90 Score=25.91 Aligned_cols=27 Identities=15% Similarity=0.116 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHHHHHHhhCCcEEEEc
Q 023164 124 YSSMLVNIFSSFIKNMYGLGARKFGVT 150 (286)
Q Consensus 124 ~v~~~v~~~~~~v~~L~~~Gar~~~v~ 150 (286)
-+..+...+.+.|.+|++.|.+.|+.-
T Consensus 23 ~~~~ik~~L~~~i~~lie~G~~~fi~G 49 (177)
T PF06908_consen 23 KIQVIKKALKKQIIELIEEGVRWFITG 49 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--EEEE-
T ss_pred hHHHHHHHHHHHHHHHHHCCCCEEEEC
Confidence 356678889999999999999988763
No 66
>PRK13660 hypothetical protein; Provisional
Probab=35.15 E-value=2.2e+02 Score=23.79 Aligned_cols=27 Identities=4% Similarity=-0.006 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCcEEEEcc
Q 023164 125 SSMLVNIFSSFIKNMYGLGARKFGVTS 151 (286)
Q Consensus 125 v~~~v~~~~~~v~~L~~~Gar~~~v~~ 151 (286)
+..+-..+.+.|.++++.|.+.|++-+
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg 50 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG 50 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 455667888999999999999887743
No 67
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=33.61 E-value=1.3e+02 Score=27.72 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=26.6
Q ss_pred ChHhhHHHHHHHHHHHHHHHHhhCCcEEEEc
Q 023164 120 TPEQYSSMLVNIFSSFIKNMYGLGARKFGVT 150 (286)
Q Consensus 120 ~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~ 150 (286)
+.+++...++..+.+.++.|+++|+|.+-|=
T Consensus 146 ~~~el~~dlA~al~~Ei~~L~~aG~~~IQiD 176 (339)
T PRK09121 146 SREKLAWEFAKILNQEAKELEAAGVDIIQFD 176 (339)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEec
Confidence 4578889999999999999999999976553
No 68
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=32.57 E-value=20 Score=28.40 Aligned_cols=16 Identities=31% Similarity=0.507 Sum_probs=13.7
Q ss_pred hhCCcEEEEccCCCCC
Q 023164 141 GLGARKFGVTSLPPLG 156 (286)
Q Consensus 141 ~~Gar~~~v~~lpplg 156 (286)
..|||+|+++|+|.+-
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 4799999999999754
No 69
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=29.62 E-value=47 Score=26.14 Aligned_cols=24 Identities=13% Similarity=0.241 Sum_probs=18.7
Q ss_pred CCceecCCCChhHHHHHHHHHHHH
Q 023164 256 SQYVFWDSVHPSQAANQVIADELI 279 (286)
Q Consensus 256 ~~ylfwD~~HPT~~~h~~iA~~~~ 279 (286)
+.|++-|.+||..+|+-.+-+.+.
T Consensus 101 ~~yfm~D~iHlgw~GWv~vd~~i~ 124 (130)
T PF04914_consen 101 EPYFMQDTIHLGWKGWVYVDQAIY 124 (130)
T ss_dssp STTSBSSSSSB-THHHHHHHHHHH
T ss_pred CCceeeecccCchhhHHHHHHHHH
Confidence 346888999999999988777664
No 70
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=28.36 E-value=22 Score=23.84 Aligned_cols=9 Identities=56% Similarity=1.464 Sum_probs=7.1
Q ss_pred eecCCCChh
Q 023164 259 VFWDSVHPS 267 (286)
Q Consensus 259 lfwD~~HPT 267 (286)
-|||.+||.
T Consensus 52 ~~W~~l~P~ 60 (62)
T PF06812_consen 52 NYWDSLHPQ 60 (62)
T ss_pred HCCcccCCC
Confidence 368999985
No 71
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=27.46 E-value=1.7e+02 Score=26.25 Aligned_cols=47 Identities=11% Similarity=0.263 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC---CC-cEEEEeccHHHHHHhhCCCCCCcccc
Q 023164 175 RINTDAQQFNKKVSSAATNLQKQLP---DL-KIVIFDIFKPIYDLVQSPSKSGFVEA 227 (286)
Q Consensus 175 ~~n~~~~~fN~~L~~~l~~l~~~~~---~~-~i~~~D~~~~~~~i~~nP~~yGf~~~ 227 (286)
.+.+-...||++|...=+++.+++. |- -|++-|.|.+|++ .||.+.+
T Consensus 181 ~y~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~------~ygl~~~ 231 (318)
T COG4531 181 KYDANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFEN------AYGLKPL 231 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHH------hhCcccc
Confidence 3444467899999888888877764 32 3666799999988 5666554
No 72
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=27.22 E-value=1e+02 Score=23.61 Aligned_cols=26 Identities=15% Similarity=0.102 Sum_probs=22.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhC
Q 023164 173 VSRINTDAQQFNKKVSSAATNLQKQL 198 (286)
Q Consensus 173 ~~~~n~~~~~fN~~L~~~l~~l~~~~ 198 (286)
.++.+++...||..|.+.|+++.+++
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35667889999999999999999875
No 73
>PF11469 Ribonucleas_3_2: Ribonuclease III; InterPro: IPR021568 This archaeal family of proteins has no known function. ; PDB: 1ZTD_A.
Probab=27.14 E-value=34 Score=25.74 Aligned_cols=19 Identities=32% Similarity=0.280 Sum_probs=13.5
Q ss_pred ccchhHhhHHH---HHHhcCCC
Q 023164 4 VSSVSLFEFLS---AADTLGFK 22 (286)
Q Consensus 4 ~~~~~~~~~~~---ia~~lGl~ 22 (286)
-||+||+||+. +.++||-|
T Consensus 5 k~GDSLvNfl~SlALse~lG~P 26 (120)
T PF11469_consen 5 KFGDSLVNFLFSLALSEYLGRP 26 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS-
T ss_pred HHhHHHHHHHHHHHHHHHhCCC
Confidence 37999999985 44567755
No 74
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.05 E-value=83 Score=29.61 Aligned_cols=47 Identities=21% Similarity=0.429 Sum_probs=32.1
Q ss_pred HHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Q 023164 138 NMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIF 209 (286)
Q Consensus 138 ~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~ 209 (286)
.+.+.|+..+ .-+.|+||.|..... +.++..+++++|++++.-+|.-
T Consensus 327 e~i~~g~~nv--IclqPFGCmPnhI~~-----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNV--ICLQPFGCMPNHIVS-----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCce--EEecCccCCcHHHHH-----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 4556777654 567899999954332 2456777788888887777753
No 75
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=26.82 E-value=1.9e+02 Score=22.67 Aligned_cols=35 Identities=9% Similarity=0.027 Sum_probs=23.4
Q ss_pred HHHHHHHHhhCCcEEEEccCCCCCccccchhccCCCCCCcchHHHHHHH
Q 023164 133 SSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQ 181 (286)
Q Consensus 133 ~~~v~~L~~~Gar~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~ 181 (286)
.+.+++|.+.|+|+++|.- |.+. ..|.+++-++-.
T Consensus 80 ~~~l~~l~~~G~~~i~v~p-------~gF~-------~D~~Etl~di~~ 114 (135)
T cd00419 80 DDALEELAKEGVKNVVVVP-------IGFV-------SDHLETLYELDI 114 (135)
T ss_pred HHHHHHHHHcCCCeEEEEC-------Cccc-------cccHHHHHHHHH
Confidence 3456788899999999854 2232 257777766543
No 76
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=25.01 E-value=2.3e+02 Score=25.18 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=35.1
Q ss_pred ccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q 023164 92 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPP 154 (286)
Q Consensus 92 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpp 154 (286)
+...++|-+|+|=+.. +...+.+...+..|+..|.|-++|.+-+|
T Consensus 34 ~~~f~VIK~GG~~~~~------------------~~~~~~l~~dla~L~~lGl~~VlVHGggp 78 (271)
T cd04236 34 WPAFAVLEVDHSVFRS------------------LEMVQSLSFGLAFLQRMDMKLLVVMGLSA 78 (271)
T ss_pred CCCEEEEEEChhhhcC------------------chhHHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 5678888999886521 13456677788899999999999999877
No 77
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=23.59 E-value=85 Score=25.29 Aligned_cols=24 Identities=17% Similarity=0.243 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhCCcEEEEccCCCC
Q 023164 132 FSSFIKNMYGLGARKFGVTSLPPL 155 (286)
Q Consensus 132 ~~~~v~~L~~~Gar~~~v~~lppl 155 (286)
+.+.|++|.+.|+++++++.+-|.
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P~ 124 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYPQ 124 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCcc
Confidence 346678899999999999887773
No 78
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=22.87 E-value=1.1e+02 Score=26.99 Aligned_cols=25 Identities=20% Similarity=0.468 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHhhCCcEEEEcc
Q 023164 127 MLVNIFSSFIKNMYGLGARKFGVTS 151 (286)
Q Consensus 127 ~~v~~~~~~v~~L~~~Gar~~~v~~ 151 (286)
.++.-+.+.++.|+..|.|||+++|
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEe
Confidence 4555566778899999999999988
No 79
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=22.49 E-value=1.4e+02 Score=27.87 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=28.4
Q ss_pred ChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCC
Q 023164 120 TPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPL 155 (286)
Q Consensus 120 ~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lppl 155 (286)
+.++++..++..+.+.++.|+++|+|.+-+=. |.+
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQiDe-p~l 194 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQLDD-TVW 194 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEecC-cch
Confidence 46788999999999999999999998765533 444
No 80
>PRK06233 hypothetical protein; Provisional
Probab=21.87 E-value=1.4e+02 Score=27.76 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=28.4
Q ss_pred ChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCC
Q 023164 120 TPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPL 155 (286)
Q Consensus 120 ~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lppl 155 (286)
+.+++...++..+.+.++.|+++|+|.+-|=. |.+
T Consensus 161 ~~eel~~dlA~a~~~Ei~~L~~aG~~~IQiDe-P~~ 195 (372)
T PRK06233 161 SWDDYLDDLAQAYHDTIQHFYDLGARYIQLDD-TTW 195 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEcC-CCH
Confidence 45788999999999999999999999765543 443
No 81
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=21.21 E-value=4.9e+02 Score=23.13 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHhCchhHHhhhccceEEEEecchhHhhhhhcCCccCccCChHhhHHHHHHHHHHHHHHHHhhCC
Q 023164 65 TQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA 144 (286)
Q Consensus 65 ~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga 144 (286)
.+++++|.+..+-++. ..+..++|.+|++=+.. +.+.+.+.+.|..|...|.
T Consensus 5 ~~~~~~~~~~~pyi~~----------~~~~~~VIk~gG~~~~~------------------~~l~~~~~~di~~l~~~g~ 56 (284)
T CHL00202 5 DERVQVLSEALPYIQK----------FRGRIMVIKYGGAAMKN------------------LILKADIIKDILFLSCIGL 56 (284)
T ss_pred HHHHHHHHHHHHHHHH----------HcCCeEEEEEChHHhcC------------------cchHHHHHHHHHHHHHCCC
Confidence 3567777766544432 35578899999865321 1233445566778889999
Q ss_pred cEEEEccCCCC
Q 023164 145 RKFGVTSLPPL 155 (286)
Q Consensus 145 r~~~v~~lppl 155 (286)
+=++|.+-+|.
T Consensus 57 ~~VlVHGgg~~ 67 (284)
T CHL00202 57 KIVVVHGGGPE 67 (284)
T ss_pred cEEEEeCCcHH
Confidence 98899888774
No 82
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]
Probab=21.13 E-value=54 Score=32.33 Aligned_cols=52 Identities=13% Similarity=0.259 Sum_probs=28.9
Q ss_pred hhccceEEEEecchhHhhhhhcCCcc-----CccCChHhhHHHHHHHHHHHHHHHHhhCC
Q 023164 90 IIKDAIYIVGSGSGDFLQNYYVNPLL-----NKVYTPEQYSSMLVNIFSSFIKNMYGLGA 144 (286)
Q Consensus 90 ~~~~sL~~i~iG~ND~~~~~~~~~~~-----~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga 144 (286)
.+.+-+=+++||.||+.. |...-.| +..++ .+.+.++.-|...|+.-+..|-
T Consensus 442 ~lakevDFfSIGTNDLtQ-YtLA~DR~n~~vs~ly~--pl~PAVLrlI~~vi~~ah~~gk 498 (574)
T COG1080 442 QLAKEVDFFSIGTNDLTQ-YTLAVDRGNAKVSHLYD--PLHPAVLRLIKQVIDAAHRHGK 498 (574)
T ss_pred HHHHhCCEeeecccHHHH-HHHHHhcCChhhhhhcC--CCCHHHHHHHHHHHHHHHHcCC
Confidence 455666789999999987 4321111 11111 2335566666666665555543
No 83
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=20.89 E-value=2.3e+02 Score=21.62 Aligned_cols=25 Identities=12% Similarity=0.263 Sum_probs=21.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhC
Q 023164 174 SRINTDAQQFNKKVSSAATNLQKQL 198 (286)
Q Consensus 174 ~~~n~~~~~fN~~L~~~l~~l~~~~ 198 (286)
++....+..||+.|.+.+.++.+++
T Consensus 57 ~q~~a~t~~F~~aL~~~L~~~~~~h 81 (111)
T PF09677_consen 57 EQVEALTQRFMQALEASLAEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4566788999999999999998764
No 84
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=20.68 E-value=3.3e+02 Score=24.60 Aligned_cols=37 Identities=22% Similarity=0.333 Sum_probs=28.4
Q ss_pred ChHhhHHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCc
Q 023164 120 TPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 157 (286)
Q Consensus 120 ~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~~lpplgc 157 (286)
+..+++..++..+...++.|+++|++ ++-+.=|.+..
T Consensus 145 ~~~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~~ 181 (332)
T cd03311 145 SREELAMDLALALREEIRDLYDAGCR-YIQIDEPALAE 181 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhhc
Confidence 45678899999999999999999996 55555454433
No 85
>PF10746 Phage_holin_6: Phage holin family 6; InterPro: IPR019682 This entry represents a protein conserved in Caudovirales (known as tailed bacteriophages). Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis.
Probab=20.51 E-value=53 Score=22.57 Aligned_cols=15 Identities=33% Similarity=0.419 Sum_probs=12.2
Q ss_pred cccchhHhhHHHHHH
Q 023164 3 YVSSVSLFEFLSAAD 17 (286)
Q Consensus 3 ~~~~~~~~~~~~ia~ 17 (286)
|.+|+|+.||.+||.
T Consensus 27 ~f~GLslneWfyiat 41 (66)
T PF10746_consen 27 YFWGLSLNEWFYIAT 41 (66)
T ss_pred HHcCCCHHHHHHHHH
Confidence 457899999998875
Done!