Query 023165
Match_columns 286
No_of_seqs 138 out of 1217
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 08:54:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023165.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023165hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 1.5E-57 3.2E-62 420.0 23.9 260 1-279 80-346 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 2.4E-57 5.3E-62 414.2 24.3 260 1-279 52-315 (315)
3 cd01847 Triacylglycerol_lipase 100.0 9.4E-50 2E-54 358.6 18.7 237 1-278 40-280 (281)
4 PRK15381 pathogenicity island 100.0 1.2E-44 2.7E-49 336.6 20.7 202 24-276 197-398 (408)
5 cd01846 fatty_acyltransferase_ 100.0 3.3E-43 7.1E-48 313.9 18.2 215 23-277 55-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 3.9E-33 8.6E-38 250.8 12.3 226 23-278 106-332 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 3.1E-21 6.7E-26 166.6 10.8 187 22-275 40-234 (234)
8 cd01824 Phospholipase_B_like P 98.8 8E-08 1.7E-12 86.8 13.1 85 55-149 96-181 (288)
9 cd01836 FeeA_FeeB_like SGNH_hy 98.7 4.8E-08 1.1E-12 82.3 8.9 120 82-277 67-187 (191)
10 cd01834 SGNH_hydrolase_like_2 98.7 2.5E-07 5.5E-12 77.3 11.9 129 83-278 62-191 (191)
11 cd00229 SGNH_hydrolase SGNH_hy 98.7 2.3E-07 4.9E-12 75.4 10.4 122 81-277 64-186 (187)
12 cd01829 SGNH_hydrolase_peri2 S 98.6 1.5E-07 3.3E-12 79.7 9.2 135 84-277 61-196 (200)
13 cd01828 sialate_O-acetylestera 98.6 3.2E-07 6.9E-12 75.8 10.5 116 83-277 49-166 (169)
14 cd01839 SGNH_arylesterase_like 98.6 1.8E-07 3.9E-12 80.0 8.6 119 82-277 79-203 (208)
15 cd01833 XynB_like SGNH_hydrola 98.6 3.6E-07 7.8E-12 74.5 10.0 116 82-278 40-156 (157)
16 cd01832 SGNH_hydrolase_like_1 98.6 5.9E-07 1.3E-11 75.1 10.9 117 82-277 67-184 (185)
17 cd04506 SGNH_hydrolase_YpmR_li 98.6 9.5E-07 2.1E-11 75.2 12.3 131 82-277 68-203 (204)
18 cd04501 SGNH_hydrolase_like_4 98.6 1.2E-06 2.6E-11 73.2 12.3 122 83-277 60-181 (183)
19 cd01830 XynE_like SGNH_hydrola 98.6 1.8E-06 3.9E-11 73.8 13.5 56 84-144 76-131 (204)
20 cd01841 NnaC_like NnaC (CMP-Ne 98.5 5.6E-07 1.2E-11 74.6 9.9 120 83-277 52-172 (174)
21 cd01823 SEST_like SEST_like. A 98.5 1.4E-06 2.9E-11 77.1 12.7 159 83-277 81-258 (259)
22 cd01838 Isoamyl_acetate_hydrol 98.5 2E-06 4.3E-11 72.4 10.9 133 82-277 63-197 (199)
23 PF13472 Lipase_GDSL_2: GDSL-l 98.4 2.7E-06 5.8E-11 69.4 10.2 119 82-271 61-179 (179)
24 cd01821 Rhamnogalacturan_acety 98.4 2E-06 4.4E-11 72.9 8.8 132 82-277 65-196 (198)
25 cd01826 acyloxyacyl_hydrolase_ 98.4 6E-06 1.3E-10 74.2 11.9 55 84-143 124-180 (305)
26 cd01835 SGNH_hydrolase_like_3 98.3 6.2E-06 1.3E-10 69.5 10.7 123 82-277 69-191 (193)
27 cd01827 sialate_O-acetylestera 98.3 9.9E-06 2.1E-10 67.9 11.5 117 83-277 68-185 (188)
28 cd01820 PAF_acetylesterase_lik 98.3 4.5E-06 9.7E-11 71.9 9.3 118 83-277 90-208 (214)
29 cd04502 SGNH_hydrolase_like_7 98.2 6E-06 1.3E-10 68.3 9.0 118 83-277 51-169 (171)
30 cd01822 Lysophospholipase_L1_l 98.2 2.5E-05 5.3E-10 64.6 12.0 23 255-277 152-174 (177)
31 cd01825 SGNH_hydrolase_peri1 S 98.1 1E-05 2.2E-10 67.6 7.9 125 84-277 58-183 (189)
32 cd01844 SGNH_hydrolase_like_6 98.1 5.5E-05 1.2E-09 63.0 11.9 46 83-143 58-104 (177)
33 PRK10528 multifunctional acyl- 98.0 3.3E-05 7.2E-10 65.4 8.5 44 83-138 72-115 (191)
34 cd01840 SGNH_hydrolase_yrhL_li 97.9 9.5E-05 2.1E-09 60.1 8.9 23 255-277 126-148 (150)
35 cd01831 Endoglucanase_E_like E 97.8 0.00019 4.1E-09 59.3 9.0 21 257-277 146-166 (169)
36 KOG3035 Isoamyl acetate-hydrol 97.4 0.00055 1.2E-08 58.3 7.2 137 82-277 68-206 (245)
37 COG2755 TesA Lysophospholipase 96.9 0.0065 1.4E-07 51.9 9.3 21 258-278 187-207 (216)
38 KOG3670 Phospholipase [Lipid t 96.5 0.16 3.5E-06 47.3 15.6 78 54-139 160-237 (397)
39 COG2845 Uncharacterized protei 95.9 0.051 1.1E-06 49.2 8.6 136 82-277 177-315 (354)
40 PF14606 Lipase_GDSL_3: GDSL-l 93.1 1.2 2.5E-05 37.4 9.8 116 82-277 59-175 (178)
41 cd01842 SGNH_hydrolase_like_5 80.9 24 0.00052 29.6 9.9 20 258-277 161-180 (183)
42 PLN02757 sirohydrochlorine fer 74.1 11 0.00024 30.7 6.1 62 121-211 61-125 (154)
43 PF02633 Creatininase: Creatin 73.9 13 0.00028 32.4 6.9 60 116-209 84-144 (237)
44 COG3240 Phospholipase/lecithin 68.6 2.4 5.3E-05 39.3 1.2 71 80-152 96-166 (370)
45 cd00384 ALAD_PBGS Porphobilino 66.5 22 0.00048 32.4 6.7 64 115-202 48-111 (314)
46 PRK13384 delta-aminolevulinic 62.3 28 0.0006 31.9 6.5 64 115-202 58-121 (322)
47 PRK09283 delta-aminolevulinic 62.2 25 0.00055 32.1 6.3 64 115-202 56-119 (323)
48 PF00490 ALAD: Delta-aminolevu 60.6 28 0.00061 31.9 6.3 65 116-202 55-119 (324)
49 cd04824 eu_ALAD_PBGS_cysteine_ 60.3 18 0.00039 33.0 5.0 66 115-202 48-114 (320)
50 cd04823 ALAD_PBGS_aspartate_ri 60.2 28 0.0006 31.9 6.2 66 115-202 51-116 (320)
51 KOG2794 Delta-aminolevulinic a 58.3 30 0.00064 31.0 5.9 94 81-202 38-131 (340)
52 cd03416 CbiX_SirB_N Sirohydroc 54.5 31 0.00067 25.4 4.9 51 122-201 48-98 (101)
53 PF08885 GSCFA: GSCFA family; 52.4 67 0.0014 28.5 7.3 108 81-207 100-223 (251)
54 PF01903 CbiX: CbiX; InterPro 52.0 8.6 0.00019 28.6 1.4 52 122-202 41-92 (105)
55 PF08029 HisG_C: HisG, C-termi 51.6 13 0.00027 26.6 2.1 21 120-140 52-72 (75)
56 COG0113 HemB Delta-aminolevuli 51.5 57 0.0012 29.7 6.6 60 115-195 58-117 (330)
57 cd03414 CbiX_SirB_C Sirohydroc 47.8 67 0.0014 24.2 5.9 49 121-200 48-96 (117)
58 PF13839 PC-Esterase: GDSL/SGN 46.6 1.1E+02 0.0024 26.2 7.9 112 82-211 100-222 (263)
59 TIGR03455 HisG_C-term ATP phos 44.4 28 0.00061 26.2 3.2 23 118-140 74-96 (100)
60 PF02896 PEP-utilizers_C: PEP- 39.4 78 0.0017 28.7 5.8 20 79-100 193-212 (293)
61 cd04236 AAK_NAGS-Urea AAK_NAGS 37.6 1.2E+02 0.0026 27.2 6.6 63 57-142 16-78 (271)
62 COG2908 Uncharacterized protei 37.3 96 0.0021 27.2 5.7 65 58-142 14-78 (237)
63 PF06908 DUF1273: Protein of u 36.8 91 0.002 26.0 5.4 28 112-139 23-50 (177)
64 PRK13660 hypothetical protein; 34.4 2.4E+02 0.0051 23.7 7.5 59 113-205 24-82 (182)
65 COG0646 MetH Methionine syntha 32.9 2.3E+02 0.0051 25.8 7.6 111 26-147 60-172 (311)
66 COG1903 CbiD Cobalamin biosynt 32.0 3.4E+02 0.0073 25.5 8.7 90 30-142 167-258 (367)
67 KOG4079 Putative mitochondrial 31.5 22 0.00049 28.3 0.8 16 129-144 42-57 (169)
68 PRK13717 conjugal transfer pro 29.5 83 0.0018 24.8 3.7 25 168-192 71-95 (128)
69 PF06812 ImpA-rel_N: ImpA-rela 28.5 22 0.00048 24.0 0.3 9 256-264 52-60 (62)
70 PF08331 DUF1730: Domain of un 27.7 1.5E+02 0.0033 20.8 4.6 66 129-201 8-77 (78)
71 PF04914 DltD_C: DltD C-termin 27.1 45 0.00098 26.4 1.9 24 253-276 101-124 (130)
72 COG3581 Uncharacterized protei 26.6 1.2E+02 0.0026 28.8 4.7 21 127-149 328-348 (420)
73 COG1209 RfbA dTDP-glucose pyro 25.4 1.5E+02 0.0032 26.8 4.9 86 123-218 37-144 (286)
74 TIGR00175 mito_nad_idh isocitr 24.4 1.2E+02 0.0026 28.1 4.4 39 179-217 180-218 (333)
75 PLN00123 isocitrate dehydrogen 24.2 1.2E+02 0.0027 28.3 4.5 38 180-217 204-241 (360)
76 PRK03437 3-isopropylmalate deh 23.8 1E+02 0.0022 28.7 3.8 37 181-217 197-233 (344)
77 COG1402 Uncharacterized protei 23.7 1E+02 0.0023 27.2 3.8 25 115-139 87-111 (250)
78 TIGR02744 TrbI_Ftype type-F co 23.1 1.3E+02 0.0028 23.2 3.7 25 168-192 58-82 (112)
79 TIGR02089 TTC tartrate dehydro 22.9 1.2E+02 0.0027 28.3 4.2 37 181-217 200-236 (352)
80 TIGR00169 leuB 3-isopropylmala 22.9 1.5E+02 0.0032 27.7 4.7 38 180-217 197-234 (349)
81 PRK00772 3-isopropylmalate deh 22.5 1.5E+02 0.0032 27.8 4.7 39 179-217 199-237 (358)
82 PLN00118 isocitrate dehydrogen 21.7 1.5E+02 0.0033 27.9 4.5 39 179-217 219-257 (372)
83 PRK08997 isocitrate dehydrogen 21.5 1.6E+02 0.0035 27.2 4.7 37 181-217 184-220 (334)
84 PF07555 NAGidase: beta-N-acet 21.3 1.1E+02 0.0024 27.9 3.6 24 115-138 88-111 (306)
85 cd03413 CbiK_C Anaerobic cobal 20.8 1E+02 0.0023 23.1 2.8 18 121-138 45-62 (103)
86 PRK06520 5-methyltetrahydropte 20.6 1.4E+02 0.0031 27.9 4.2 36 108-144 160-195 (368)
87 PRK14025 multifunctional 3-iso 20.4 1.9E+02 0.0041 26.8 4.8 39 179-217 179-217 (330)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=1.5e-57 Score=419.95 Aligned_cols=260 Identities=23% Similarity=0.425 Sum_probs=216.9
Q ss_pred CcccCCC-CCCCCCCCCc-CCCCCCCCccccccCCccCCccchhhcccccccccCCCHHHHHHHHHHHHHHHhcc--hhh
Q 023165 1 MAEAFRL-PYLPPYLALK-EGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICST--RKD 76 (286)
Q Consensus 1 ia~~lgl-~~~ppyl~~~-~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~--~~~ 76 (286)
||+.||| |++||||++. .+.++.+|+|||+|||++++.+.. . ...++|..||++|+++++++... ...
T Consensus 80 iA~~lGl~p~~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~----~----~~~~~l~~Qv~~F~~~~~~l~~~~g~~~ 151 (351)
T PLN03156 80 ISEAFGLKPAIPAYLDPSYNISDFATGVCFASAGTGYDNATSD----V----LSVIPLWKELEYYKEYQTKLRAYLGEEK 151 (351)
T ss_pred HHHHhCCCCCCCCCcCcccCchhhcccceeecCCccccCCCcc----c----cCccCHHHHHHHHHHHHHHHHHhhChHH
Confidence 7899999 7999999875 357899999999999998776531 1 12368999999999987765431 223
Q ss_pred HHhhcccCeEEEeeccchhhhhhhc--cCC-chhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhh
Q 023165 77 CETYFKKSLFFVGEIGGNDYNYRAF--VGE-SINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLF 153 (286)
Q Consensus 77 ~~~~~~~sL~~i~~iG~ND~~~~~~--~~~-s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~ 153 (286)
+.+..+++||+| |||+|||+..++ ... ....+.++++.+++.+.+.|++||++|||||+|+|+||+||+|..+...
T Consensus 152 ~~~~~~~sL~~i-~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~ 230 (351)
T PLN03156 152 ANEIISEALYLI-SIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTN 230 (351)
T ss_pred HHHHHhcCeEEE-EecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhc
Confidence 446678999999 999999985432 111 1124678999999999999999999999999999999999999876532
Q ss_pred ccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCC
Q 023165 154 QSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPY 233 (286)
Q Consensus 154 ~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~ 233 (286)
.. +..+|.+.+|.+++.||.+|++++++|++++|+++|+++|+|+++.++++||++||| ++++++||++| .|
T Consensus 231 ~~------~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf-~~~~~aCCg~g-~~ 302 (351)
T PLN03156 231 LM------GGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGF-EVTSVACCATG-MF 302 (351)
T ss_pred CC------CCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCc-ccCCccccCCC-CC
Confidence 11 135899999999999999999999999999999999999999999999999999999 89999999976 54
Q ss_pred CCCCCcccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhcCC
Q 023165 234 NFNNSARCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIHGP 279 (286)
Q Consensus 234 n~~~~~~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~~~ 279 (286)
+....|+......|++|++|+|||++|||+++|+++|+.++++.
T Consensus 303 --~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~l 346 (351)
T PLN03156 303 --EMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKTL 346 (351)
T ss_pred --CCccccCCCCCCccCCccceEEecCCCchHHHHHHHHHHHHHHH
Confidence 34567975443589999999999999999999999999999874
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=2.4e-57 Score=414.19 Aligned_cols=260 Identities=41% Similarity=0.705 Sum_probs=218.2
Q ss_pred CcccCCCCC-CCCCCCCcCCCCCCCCccccccCCccCCccchhhcccccccccCCCHHHHHHHHHHHHHHHhcc--hhhH
Q 023165 1 MAEAFRLPY-LPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICST--RKDC 77 (286)
Q Consensus 1 ia~~lgl~~-~ppyl~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~--~~~~ 77 (286)
||+.||++. +|||+.+..+.++.+|+|||+|||++++.+.. ...+++|..||++|+++++++... ...+
T Consensus 52 la~~lgl~~~~p~~~~~~~~~~~~~G~NfA~gGA~~~~~~~~--------~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~ 123 (315)
T cd01837 52 IAEALGLPLLPPPYLSPNGSSDFLTGVNFASGGAGILDSTGF--------LGSVISLSVQLEYFKEYKERLRALVGEEAA 123 (315)
T ss_pred hhhhccCCCCCCCccCccccchhhccceecccCCccccCCcc--------eeeeecHHHHHHHHHHHHHHHHHhhCHHHH
Confidence 689999996 78888754335789999999999999876532 013479999999999988765421 2334
Q ss_pred HhhcccCeEEEeeccchhhhhhhccCCc-hhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccC
Q 023165 78 ETYFKKSLFFVGEIGGNDYNYRAFVGES-INQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSL 156 (286)
Q Consensus 78 ~~~~~~sL~~i~~iG~ND~~~~~~~~~s-~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~ 156 (286)
.+..+++||+| |||+|||+..+....+ ..+..++++.+++++.++|++||++|||||+|+|+||+||+|..+.....
T Consensus 124 ~~~~~~sL~~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~- 201 (315)
T cd01837 124 ADILSKSLFLI-SIGSNDYLNNYFANPTRQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGG- 201 (315)
T ss_pred HHHHhCCEEEE-EecccccHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCC-
Confidence 56789999999 9999999875533221 23457899999999999999999999999999999999999998765321
Q ss_pred CcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCC
Q 023165 157 NEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFN 236 (286)
Q Consensus 157 ~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~ 236 (286)
+..+|.+.++++++.||.+|+++|++|++++|+++|+++|+|+++.++++||++||| ++++++||++| .+ .
T Consensus 202 -----~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf-~~~~~aCc~~g-~~--~ 272 (315)
T cd01837 202 -----DGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGF-ENTLKACCGTG-GP--E 272 (315)
T ss_pred -----CCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCC-cCCCcCccCCC-CC--C
Confidence 135899999999999999999999999999999999999999999999999999999 89999999976 32 2
Q ss_pred CCcccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhcCC
Q 023165 237 NSARCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIHGP 279 (286)
Q Consensus 237 ~~~~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~~~ 279 (286)
....|+......|++|++|+|||++|||+++|++||+++++|.
T Consensus 273 ~~~~c~~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g~ 315 (315)
T cd01837 273 GGLLCNPCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSGP 315 (315)
T ss_pred cccccCCCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcCC
Confidence 3456865445789999999999999999999999999999874
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=9.4e-50 Score=358.63 Aligned_cols=237 Identities=19% Similarity=0.168 Sum_probs=190.1
Q ss_pred CcccCCCCCCCCCCCCcCCCCCCCCccccccCCccCCccchhhcccccccccCCCHHHHHHHHHHHHHHHhcchhhHHhh
Q 023165 1 MAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETY 80 (286)
Q Consensus 1 ia~~lgl~~~ppyl~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~~~~~~~ 80 (286)
|++.+|++.+ +++ .+.++.+|+|||+|||++.+.+.... . ....++|.+||++|++.+. ..
T Consensus 40 ~~~~~~~~~~---~~~-~~~~~~~G~NfA~gGa~~~~~~~~~~--~---~~~~~~l~~Qv~~f~~~~~----------~~ 100 (281)
T cd01847 40 LGVAEGYGLT---TGT-ATPTTPGGTNYAQGGARVGDTNNGNG--A---GAVLPSVTTQIANYLAAGG----------GF 100 (281)
T ss_pred HHHHHHcCCC---cCc-CcccCCCCceeeccCccccCCCCccc--c---ccCCCCHHHHHHHHHHhcC----------CC
Confidence 3566777644 222 24578899999999999987543210 0 0124699999999987642 23
Q ss_pred cccCeEEEeeccchhhhhhhccCCc----hhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccC
Q 023165 81 FKKSLFFVGEIGGNDYNYRAFVGES----INQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSL 156 (286)
Q Consensus 81 ~~~sL~~i~~iG~ND~~~~~~~~~s----~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~ 156 (286)
.+++||+| |||+|||+..+....+ ..++.++++.+++++.++|++|+++|||+|+|+|+||+||+|..+...
T Consensus 101 ~~~sL~~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~--- 176 (281)
T cd01847 101 DPNALYTV-WIGGNDLIAALAALTTATTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP--- 176 (281)
T ss_pred CCCeEEEE-ecChhHHHHHHhhccccccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc---
Confidence 68999999 9999999975422211 234678999999999999999999999999999999999999886531
Q ss_pred CcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCC
Q 023165 157 NEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFN 236 (286)
Q Consensus 157 ~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~ 236 (286)
..|.+.+++++..||.+|+++|++|+++ +|+++|+|+++.++++||++||| ++++++||+.+..+
T Consensus 177 -------~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~~~~~i~~nP~~yGf-~~~~~~CC~~~~~~--- 241 (281)
T cd01847 177 -------AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTATLLKEVVANPAAYGF-TNTTTPACTSTSAA--- 241 (281)
T ss_pred -------chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHHHHHHHHhChHhcCc-cCCCccccCCCCcc---
Confidence 3578899999999999999999998754 89999999999999999999999 89999999954222
Q ss_pred CCcccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhcC
Q 023165 237 NSARCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIHG 278 (286)
Q Consensus 237 ~~~~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 278 (286)
.|.......|++|++|+|||++||||++|+++|+++++.
T Consensus 242 ---~~~~~~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~~ 280 (281)
T cd01847 242 ---GSGAATLVTAAAQSTYLFADDVHPTPAGHKLIAQYALSR 280 (281)
T ss_pred ---ccccccccCCCCccceeeccCCCCCHHHHHHHHHHHHHh
Confidence 243333357999999999999999999999999998763
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1.2e-44 Score=336.59 Aligned_cols=202 Identities=20% Similarity=0.211 Sum_probs=165.9
Q ss_pred CCccccccCCccCCccchhhcccccccccCCCHHHHHHHHHHHHHHHhcchhhHHhhcccCeEEEeeccchhhhhhhccC
Q 023165 24 HGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVG 103 (286)
Q Consensus 24 ~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~ 103 (286)
+|+|||+|||+++..... .+.. ...++|.+||++|+. .+++||+| |+|+|||+..
T Consensus 197 ~G~NFA~GGA~~~t~~~~--~~~~---~~~~~L~~Qv~~~~~---------------~~~aL~lV-~iG~NDy~~~---- 251 (408)
T PRK15381 197 EMLNFAEGGSTSASYSCF--NCIG---DFVSNTDRQVASYTP---------------SHQDLAIF-LLGANDYMTL---- 251 (408)
T ss_pred CCceEeeccccccccccc--cccc---CccCCHHHHHHHHHh---------------cCCcEEEE-EeccchHHHh----
Confidence 799999999999732111 0000 013689999998653 16799999 9999999832
Q ss_pred CchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHH
Q 023165 104 ESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKA 183 (286)
Q Consensus 104 ~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~ 183 (286)
..++++.+++++.++|++||++|||||+|+|+||+||+|..+.. ...+.+|.++..||.+|++
T Consensus 252 -----~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~------------~~~~~~N~~a~~fN~~L~~ 314 (408)
T PRK15381 252 -----HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS------------DEKRKLKDESIAHNALLKT 314 (408)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc------------CchHHHHHHHHHHHHHHHH
Confidence 13467789999999999999999999999999999999987631 1236889999999999999
Q ss_pred HHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcccCCCCcccCCCCCCceecCCCCh
Q 023165 184 ELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARCGHTGSRACENPSTHANWDGIHL 263 (286)
Q Consensus 184 ~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c~~~~~~~C~~~~~y~fwD~~HP 263 (286)
+|++|++++|+++|+++|+|+++.++++||++||| ++++. ||+.| .. +....|. +....|+ +|+|||.+||
T Consensus 315 ~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF-~~~~~-cCg~G-~~--~~~~~C~-p~~~~C~---~YvFWD~vHP 385 (408)
T PRK15381 315 NVEELKEKYPQHKICYYETADAFKVIMEAASNIGY-DTENP-YTHHG-YV--HVPGAKD-PQLDICP---QYVFNDLVHP 385 (408)
T ss_pred HHHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcCC-Ccccc-ccCCC-cc--CCccccC-cccCCCC---ceEecCCCCC
Confidence 99999999999999999999999999999999999 78776 99976 32 2345675 3456785 9999999999
Q ss_pred hHHHHHHHHHHHh
Q 023165 264 TESAYRHVANGLI 276 (286)
Q Consensus 264 T~~~h~~ia~~~~ 276 (286)
|+++|+++|+++-
T Consensus 386 Te~ah~iiA~~~~ 398 (408)
T PRK15381 386 TQEVHHCFAIMLE 398 (408)
T ss_pred hHHHHHHHHHHHH
Confidence 9999999999874
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=3.3e-43 Score=313.91 Aligned_cols=215 Identities=23% Similarity=0.248 Sum_probs=180.5
Q ss_pred CCCccccccCCccCCccchhhcccccccccCCCHHHHHHHHHHHHHHHhcchhhHHhhcccCeEEEeeccchhhhhhhcc
Q 023165 23 KHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFV 102 (286)
Q Consensus 23 ~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~~ 102 (286)
..|+|||+|||++.+.+... . .....++..||++|++++.. +..+++|++| |+|+||+...+..
T Consensus 55 ~~~~N~A~~Ga~~~~~~~~~---~---~~~~~~l~~Qv~~f~~~~~~---------~~~~~~l~~i-~~G~ND~~~~~~~ 118 (270)
T cd01846 55 KQGYNYAVGGATAGAYNVPP---Y---PPTLPGLSDQVAAFLAAHKL---------RLPPDTLVAI-WIGANDLLNALDL 118 (270)
T ss_pred CCcceeEecccccCCcccCC---C---CCCCCCHHHHHHHHHHhccC---------CCCCCcEEEE-Eeccchhhhhccc
Confidence 48999999999997765320 1 11346999999999987432 3457899999 9999999875421
Q ss_pred CCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHH
Q 023165 103 GESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLK 182 (286)
Q Consensus 103 ~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~ 182 (286)
......+++.+++++.+.|++|+++|+|+|+|+++||++|+|..+.... ...+.++.+++.||.+|+
T Consensus 119 ---~~~~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~----------~~~~~~~~~~~~~N~~L~ 185 (270)
T cd01846 119 ---PQNPDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGD----------AVAARATALTAAYNAKLA 185 (270)
T ss_pred ---cccccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCc----------ccHHHHHHHHHHHHHHHH
Confidence 1233567889999999999999999999999999999999999875321 111588999999999999
Q ss_pred HHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcccCCCCcccCCCCCCceecCCCC
Q 023165 183 AELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARCGHTGSRACENPSTHANWDGIH 262 (286)
Q Consensus 183 ~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c~~~~~~~C~~~~~y~fwD~~H 262 (286)
+++.+|++++|+++|+++|+|.++.++++||+.||| ++++.+||+++ . |. .....|.+|++|+|||++|
T Consensus 186 ~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~p~~yGf-~~~~~~C~~~~-------~--~~-~~~~~c~~~~~y~fwD~~H 254 (270)
T cd01846 186 EKLAELKAQHPGVNILLFDTNALFNDILDNPAAYGF-TNVTDPCLDYV-------Y--SY-SPREACANPDKYLFWDEVH 254 (270)
T ss_pred HHHHHHHHhCCCCeEEEEEhHHHHHHHHhCHHhcCC-CcCcchhcCCC-------c--cc-cccCCCCCccceEEecCCC
Confidence 999999999999999999999999999999999999 89999999853 1 53 3557899999999999999
Q ss_pred hhHHHHHHHHHHHhc
Q 023165 263 LTESAYRHVANGLIH 277 (286)
Q Consensus 263 PT~~~h~~ia~~~~~ 277 (286)
||+++|++||+++++
T Consensus 255 pT~~~~~~iA~~~~~ 269 (270)
T cd01846 255 PTTAVHQLIAEEVAA 269 (270)
T ss_pred ccHHHHHHHHHHHHh
Confidence 999999999999876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=3.9e-33 Score=250.80 Aligned_cols=226 Identities=19% Similarity=0.202 Sum_probs=170.6
Q ss_pred CCCccccccCCccCCccchhhcccccccccCCCHHHHHHHHHHHHHHH-hcchhhHHhhcccCeEEEeeccchhhhhhhc
Q 023165 23 KHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSI-CSTRKDCETYFKKSLFFVGEIGGNDYNYRAF 101 (286)
Q Consensus 23 ~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~-~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~ 101 (286)
..|.|||+|||++...+... .++ ....++.+|+.+|+...... .......-......|+.+ |.|+||++..-.
T Consensus 106 a~gnd~A~gga~~~~~~~~~--~i~---~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~~-~ggand~~~~~~ 179 (370)
T COG3240 106 AGGNDLAVGGARSTEPNTGN--SIG---ASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYFL-WGGANDYLALPM 179 (370)
T ss_pred cccccHhhhccccccccccc--ccc---ccccchHHHHHHHHHhcCCccccccccccccCHHHHHHH-hhcchhhhcccc
Confidence 68999999999985554111 111 13469999999999875432 110111223456789999 999999987521
Q ss_pred cCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHH
Q 023165 102 VGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTML 181 (286)
Q Consensus 102 ~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L 181 (286)
. .....+.+.......+...|++|.++|||+|+|+++|+++.+|...... .-.+.+.+++..||..|
T Consensus 180 ~--~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~-----------~~~~~a~~~t~~~Na~L 246 (370)
T COG3240 180 L--KAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG-----------TEAIQASQATIAFNASL 246 (370)
T ss_pred c--chhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc-----------chHHHHHHHHHHHHHHH
Confidence 1 1122233444556789999999999999999999999999999986421 12237889999999999
Q ss_pred HHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcccCCCCcccCCCCCCceecCCC
Q 023165 182 KAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARCGHTGSRACENPSTHANWDGI 261 (286)
Q Consensus 182 ~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c~~~~~~~C~~~~~y~fwD~~ 261 (286)
.+.|++++ .+|+.+|++.+|++|++||++||| +|++..||... + ....|.......|..|++|+|||++
T Consensus 247 ~~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGl-ant~~~~c~~~-~----~~~~~~a~~p~~~~~~~~ylFaD~v 315 (370)
T COG3240 247 TSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGL-ANTTAPACDAT-V----SNPACSASLPALCAAPQKYLFADSV 315 (370)
T ss_pred HHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCc-ccCCCcccCcc-c----CCcccccccccccCCccceeeeccc
Confidence 99998875 799999999999999999999999 89999999843 1 1235654333445667889999999
Q ss_pred ChhHHHHHHHHHHHhcC
Q 023165 262 HLTESAYRHVANGLIHG 278 (286)
Q Consensus 262 HPT~~~h~~ia~~~~~~ 278 (286)
|||+++|++||+++++.
T Consensus 316 HPTt~~H~liAeyila~ 332 (370)
T COG3240 316 HPTTAVHHLIAEYILAR 332 (370)
T ss_pred CCchHHHHHHHHHHHHH
Confidence 99999999999999864
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.85 E-value=3.1e-21 Score=166.57 Aligned_cols=187 Identities=28% Similarity=0.412 Sum_probs=131.7
Q ss_pred CCCCccccccCCccCCccchhhcccccccccCCCHHHHHHHHHHHHHHHhcchhhHHhhcccCeEEEeeccchhhhhhhc
Q 023165 22 FKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAF 101 (286)
Q Consensus 22 ~~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~ 101 (286)
-..+.|+|++|+++...... . ......+..|+...... ....+.+|++| |+|+||++....
T Consensus 40 ~~~~~n~a~~G~~~~~~~~~----~---~~~~~~~~~~~~~~~~~-----------~~~~~~~lv~i-~~G~ND~~~~~~ 100 (234)
T PF00657_consen 40 GVDVSNYAISGATSDGDLYN----L---WAQVQNISQQISRLLDS-----------KSFYDPDLVVI-WIGTNDYFNNRD 100 (234)
T ss_dssp TEEEEEEE-TT--CC-HGGC----C---CCTCHHHHHHHHHHHHH-----------HHHHTTSEEEE-E-SHHHHSSCCS
T ss_pred CCCeeccccCCCccccccch----h---hHHHHHHHHHhhccccc-----------cccCCcceEEE-ecccCcchhhcc
Confidence 35678999999997433210 0 00011123333322111 13347799999 999999975211
Q ss_pred cCCchhhHhhhHHHHHHHHHHHHHHHHhcCcc-----EEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHH
Q 023165 102 VGESINQLRASVPLVVKAITNATRLLIEEGAV-----ELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARY 176 (286)
Q Consensus 102 ~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar-----~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 176 (286)
.......++.+++.+.+.|++|++.|+| +++++++||++|.|....... ....|.+.+++.+..
T Consensus 101 ----~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 169 (234)
T PF00657_consen 101 ----SSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK-------DSASCIERLNAIVAA 169 (234)
T ss_dssp ----CSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT-------TTCTTHHHHHHHHHH
T ss_pred ----cchhhhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccc-------cccccchhhHHHHHH
Confidence 1123456678899999999999999999 999999999999888765432 135799999999999
Q ss_pred HHHHHHHHHHHHHhhCC-CcEEEEEechHHHHHHH--hCCCCCCCcccccccccCCCCCCCCCCCcccCCCCcccCCCCC
Q 023165 177 HNTMLKAELHKLRQKYP-HANIIYADYYGAAMRFY--HAPGHYGFSNGAVKACCGGGGPYNFNNSARCGHTGSRACENPS 253 (286)
Q Consensus 177 fN~~L~~~l~~l~~~~~-~~~i~~~D~~~~~~~i~--~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c~~~~~~~C~~~~ 253 (286)
||.+|++++.++++.++ +.++.++|+++.+.++. .+|.. +
T Consensus 170 ~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~-------------------------------------~ 212 (234)
T PF00657_consen 170 FNSALREVAAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPEN-------------------------------------D 212 (234)
T ss_dssp HHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGH-------------------------------------H
T ss_pred HHHHHHHHhhhcccccccCCceEEEEHHHHHHHhhhccCccc-------------------------------------c
Confidence 99999999999987765 78999999999999873 22100 5
Q ss_pred CceecCCCChhHHHHHHHHHHH
Q 023165 254 THANWDGIHLTESAYRHVANGL 275 (286)
Q Consensus 254 ~y~fwD~~HPT~~~h~~ia~~~ 275 (286)
+|+|||.+|||+++|++||+++
T Consensus 213 ~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 213 KYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp HCBBSSSSSB-HHHHHHHHHHH
T ss_pred eeccCCCcCCCHHHHHHHHcCC
Confidence 8899999999999999999985
No 8
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.81 E-value=8e-08 Score=86.78 Aligned_cols=85 Identities=18% Similarity=0.086 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHHHHhcchhhHHhhcccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCcc-
Q 023165 55 SLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAV- 133 (286)
Q Consensus 55 ~l~~Qi~~f~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar- 133 (286)
+|..|++...+..++-.. .+....-.|++| +||+||+........ ....+...+.+.+.++.|.+..-|
T Consensus 96 dL~~qa~~lv~r~~~~~~----i~~~~dwklVtI-~IG~ND~c~~~~~~~-----~~~~~~~~~nL~~~L~~Lr~~~P~~ 165 (288)
T cd01824 96 DLPQQARLLVRRMKKDPR----VDFKNDWKLITI-FIGGNDLCSLCEDAN-----PGSPQTFVKNLRKALDILRDEVPRA 165 (288)
T ss_pred hHHHHHHHHHHHHhhccc----cccccCCcEEEE-EecchhHhhhccccc-----CcCHHHHHHHHHHHHHHHHHhCCCc
Confidence 677788755443321110 001123468999 999999976321110 122445667778888888877755
Q ss_pred EEEEeCCCCCCccchh
Q 023165 134 ELVVPGNFPIGCSAVY 149 (286)
Q Consensus 134 ~~~v~~lpplg~~P~~ 149 (286)
.|+++++|++..++..
T Consensus 166 ~V~lv~~~~~~~l~~~ 181 (288)
T cd01824 166 FVNLVGLLNVASLRSL 181 (288)
T ss_pred EEEEEcCCCcHHHHHh
Confidence 5777788887655543
No 9
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.74 E-value=4.8e-08 Score=82.29 Aligned_cols=120 Identities=19% Similarity=0.150 Sum_probs=74.2
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHh-cCccEEEEeCCCCCCccchhhhhhccCCccc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIE-EGAVELVVPGNFPIGCSAVYLTLFQSLNEMD 160 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~-~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~ 160 (286)
.-++++| .+|+||+.... + .++..+++.+.|+++.+ ....+|+|.++||++..|....
T Consensus 67 ~pd~Vii-~~G~ND~~~~~----~-------~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~--------- 125 (191)
T cd01836 67 RFDVAVI-SIGVNDVTHLT----S-------IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ--------- 125 (191)
T ss_pred CCCEEEE-EecccCcCCCC----C-------HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH---------
Confidence 4478999 99999986421 1 23455566666666665 3556899999999876653211
Q ss_pred ccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcc
Q 023165 161 YDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSAR 240 (286)
Q Consensus 161 ~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~ 240 (286)
......++..+.+|+.+++. .++++ .+.++|++..+.
T Consensus 126 ----~~~~~~~~~~~~~n~~~~~~----a~~~~--~~~~id~~~~~~--------------------------------- 162 (191)
T cd01836 126 ----PLRWLLGRRARLLNRALERL----ASEAP--RVTLLPATGPLF--------------------------------- 162 (191)
T ss_pred ----HHHHHHHHHHHHHHHHHHHH----HhcCC--CeEEEecCCccc---------------------------------
Confidence 11122344556666665554 33333 344556532210
Q ss_pred cCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 241 CGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 241 c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
..++.-|++||+++||++||+.+.+
T Consensus 163 ------------~~~~~~DglHpn~~Gy~~~a~~l~~ 187 (191)
T cd01836 163 ------------PALFASDGFHPSAAGYAVWAEALAP 187 (191)
T ss_pred ------------hhhccCCCCCCChHHHHHHHHHHHH
Confidence 1234469999999999999999864
No 10
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.69 E-value=2.5e-07 Score=77.33 Aligned_cols=129 Identities=12% Similarity=0.052 Sum_probs=81.5
Q ss_pred cCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHH-hcCccEEEEeCCCCCCccchhhhhhccCCcccc
Q 023165 83 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLI-EEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDY 161 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~-~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~ 161 (286)
-.+++| ++|.||+....... ...+...+++.+.|+.|. .....+|++++.++....+..
T Consensus 62 ~d~v~l-~~G~ND~~~~~~~~-------~~~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~------------ 121 (191)
T cd01834 62 PDVVSI-MFGINDSFRGFDDP-------VGLEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP------------ 121 (191)
T ss_pred CCEEEE-EeecchHhhccccc-------ccHHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC------------
Confidence 379999 99999997542101 112345666677777775 344456777776554322110
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCccc
Q 023165 162 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARC 241 (286)
Q Consensus 162 d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c 241 (286)
..-....+.....||..|++..+ +. .+.++|+++.+.+....+
T Consensus 122 --~~~~~~~~~~~~~~n~~l~~~a~----~~---~~~~iD~~~~~~~~~~~~---------------------------- 164 (191)
T cd01834 122 --LPDGAEYNANLAAYADAVRELAA----EN---GVAFVDLFTPMKEAFQKA---------------------------- 164 (191)
T ss_pred --CCChHHHHHHHHHHHHHHHHHHH----Hc---CCeEEecHHHHHHHHHhC----------------------------
Confidence 00123445667778877766543 22 478999999877543211
Q ss_pred CCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhcC
Q 023165 242 GHTGSRACENPSTHANWDGIHLTESAYRHVANGLIHG 278 (286)
Q Consensus 242 ~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 278 (286)
+..++++|++||+++||++||+.+.++
T Consensus 165 ----------~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 ----------GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred ----------CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 123467999999999999999998763
No 11
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.66 E-value=2.3e-07 Score=75.41 Aligned_cols=122 Identities=17% Similarity=0.096 Sum_probs=76.1
Q ss_pred cccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHh-cCccEEEEeCCCCCCccchhhhhhccCCcc
Q 023165 81 FKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIE-EGAVELVVPGNFPIGCSAVYLTLFQSLNEM 159 (286)
Q Consensus 81 ~~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~-~Gar~~~v~~lpplg~~P~~~~~~~~~~~~ 159 (286)
..-.++++ .+|+||+.... ..+. ......+...++.|.+ ....+|++++.|+....|..
T Consensus 64 ~~~d~vil-~~G~ND~~~~~--~~~~-------~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~~---------- 123 (187)
T cd00229 64 DKPDLVII-ELGTNDLGRGG--DTSI-------DEFKANLEELLDALRERAPGAKVILITPPPPPPREGL---------- 123 (187)
T ss_pred CCCCEEEE-Eeccccccccc--ccCH-------HHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCchh----------
Confidence 45689999 99999996532 0111 1233344444444443 56677888888887665531
Q ss_pred cccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCc
Q 023165 160 DYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSA 239 (286)
Q Consensus 160 ~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~ 239 (286)
.......+|..+++..++.... ..+.++|++..+...
T Consensus 124 ----------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~------------------------------ 160 (187)
T cd00229 124 ----------LGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE------------------------------ 160 (187)
T ss_pred ----------hHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC------------------------------
Confidence 1234566777776665544321 235566664332110
Q ss_pred ccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 240 RCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 240 ~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
+..+++||++|||+++|+++|+.+++
T Consensus 161 ------------~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 ------------DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ------------ccccccCCCCCCchhhHHHHHHHHhc
Confidence 34668899999999999999999875
No 12
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.64 E-value=1.5e-07 Score=79.75 Aligned_cols=135 Identities=15% Similarity=0.050 Sum_probs=79.7
Q ss_pred CeEEEeeccchhhhhhhccCC-chhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCccccc
Q 023165 84 SLFFVGEIGGNDYNYRAFVGE-SINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 162 (286)
Q Consensus 84 sL~~i~~iG~ND~~~~~~~~~-s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d 162 (286)
++++| .+|+||+......+. ......++.+...+++...++++.+.|++ +++++.||+.- +
T Consensus 61 d~vii-~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~-~--------------- 122 (200)
T cd01829 61 DVVVV-FLGANDRQDIRDGDGYLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS-P--------------- 122 (200)
T ss_pred CEEEE-EecCCCCccccCCCceeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC-h---------------
Confidence 68888 899999865321110 00112334556667777777777777766 77788877531 0
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcccC
Q 023165 163 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARCG 242 (286)
Q Consensus 163 ~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c~ 242 (286)
..++....+|..+++... +. .+.++|+++.+.+ .+.|+... ..+
T Consensus 123 ------~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~~~--------------~~~~~~~~--------~~~- 166 (200)
T cd01829 123 ------KLSADMVYLNSLYREEVA----KA---GGEFVDVWDGFVD--------------ENGRFTYS--------GTD- 166 (200)
T ss_pred ------hHhHHHHHHHHHHHHHHH----Hc---CCEEEEhhHhhcC--------------CCCCeeee--------ccC-
Confidence 112344567776665443 32 3678999877521 11122200 000
Q ss_pred CCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 243 HTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 243 ~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
.......++..|++|||+.+|++||+.+.+
T Consensus 167 -----~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~ 196 (200)
T cd01829 167 -----VNGKKVRLRTNDGIHFTAAGGRKLAFYVEK 196 (200)
T ss_pred -----CCCcEEEeecCCCceECHHHHHHHHHHHHH
Confidence 111233556679999999999999999875
No 13
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.63 E-value=3.2e-07 Score=75.81 Aligned_cols=116 Identities=22% Similarity=0.287 Sum_probs=74.7
Q ss_pred cCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHh--cCccEEEEeCCCCCCccchhhhhhccCCccc
Q 023165 83 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIE--EGAVELVVPGNFPIGCSAVYLTLFQSLNEMD 160 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~--~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~ 160 (286)
-++++| .+|.||..... + .+...+.+.+.|+++.+ .++ +|++.++||.+ +.
T Consensus 49 pd~vvl-~~G~ND~~~~~----~-------~~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~------------ 101 (169)
T cd01828 49 PKAIFI-MIGINDLAQGT----S-------DEDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL------------ 101 (169)
T ss_pred CCEEEE-EeeccCCCCCC----C-------HHHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc------------
Confidence 388999 99999985321 1 13445556666666666 454 58888888754 10
Q ss_pred ccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcc
Q 023165 161 YDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSAR 240 (286)
Q Consensus 161 ~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~ 240 (286)
..........+|+.|++..++ . ++.++|+++.+.+ ..
T Consensus 102 ------~~~~~~~~~~~n~~l~~~a~~-----~--~~~~id~~~~~~~-----------~~------------------- 138 (169)
T cd01828 102 ------KSIPNEQIEELNRQLAQLAQQ-----E--GVTFLDLWAVFTN-----------AD------------------- 138 (169)
T ss_pred ------CcCCHHHHHHHHHHHHHHHHH-----C--CCEEEechhhhcC-----------CC-------------------
Confidence 012345667888888776542 2 4567888765311 00
Q ss_pred cCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 241 CGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 241 c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
+ +...++.+|++||+++||++||+.+.+
T Consensus 139 ----~-----~~~~~~~~DgiHpn~~G~~~~a~~i~~ 166 (169)
T cd01828 139 ----G-----DLKNEFTTDGLHLNAKGYAVWAAALQP 166 (169)
T ss_pred ----C-----CcchhhccCccccCHHHHHHHHHHHHH
Confidence 0 112456689999999999999999875
No 14
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.61 E-value=1.8e-07 Score=80.04 Aligned_cols=119 Identities=15% Similarity=0.177 Sum_probs=72.2
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhc------CccEEEEeCCCCCCccchhhhhhcc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEE------GAVELVVPGNFPIGCSAVYLTLFQS 155 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~------Gar~~~v~~lpplg~~P~~~~~~~~ 155 (286)
.-++++| ++|.||+...+ +.+. +...+.+.+.|+.+.+. +..+++++..||+...+...
T Consensus 79 ~pd~vii-~lGtND~~~~~--~~~~-------~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~----- 143 (208)
T cd01839 79 PLDLVII-MLGTNDLKSYF--NLSA-------AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL----- 143 (208)
T ss_pred CCCEEEE-ecccccccccc--CCCH-------HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch-----
Confidence 4488999 99999986432 1121 23344444555555544 46788999888872221110
Q ss_pred CCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCC
Q 023165 156 LNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNF 235 (286)
Q Consensus 156 ~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~ 235 (286)
..+....+.....||+.+++..++. ++.++|+++++ .
T Consensus 144 --------~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~-------------~--------------- 180 (208)
T cd01839 144 --------AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVG-------------S--------------- 180 (208)
T ss_pred --------hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHh-------------c---------------
Confidence 1223344666777887777665432 35566653321 0
Q ss_pred CCCcccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 236 NNSARCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 236 ~~~~~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
. +..|++|||+++|++||+.+++
T Consensus 181 ---------~----------~~~DGvH~~~~G~~~~a~~l~~ 203 (208)
T cd01839 181 ---------T----------SPVDGVHLDADQHAALGQALAS 203 (208)
T ss_pred ---------c----------CCCCccCcCHHHHHHHHHHHHH
Confidence 0 2379999999999999999864
No 15
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.60 E-value=3.6e-07 Score=74.49 Aligned_cols=116 Identities=16% Similarity=0.255 Sum_probs=77.2
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCc-cEEEEeCCCCCCccchhhhhhccCCccc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPGNFPIGCSAVYLTLFQSLNEMD 160 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Ga-r~~~v~~lpplg~~P~~~~~~~~~~~~~ 160 (286)
+-++++| .+|+||..... + ++...+++.+.|+++.+... -+|++.++||....
T Consensus 40 ~pd~vvi-~~G~ND~~~~~----~-------~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~-------------- 93 (157)
T cd01833 40 KPDVVLL-HLGTNDLVLNR----D-------PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDA-------------- 93 (157)
T ss_pred CCCEEEE-eccCcccccCC----C-------HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCc--------------
Confidence 4478999 99999986531 1 13455666677777776533 23666666553211
Q ss_pred ccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcc
Q 023165 161 YDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSAR 240 (286)
Q Consensus 161 ~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~ 240 (286)
..+.....||..+.+.+++.+.. +..+.++|+++.+.
T Consensus 94 --------~~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~--------------------------------- 130 (157)
T cd01833 94 --------SGNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYT--------------------------------- 130 (157)
T ss_pred --------chhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCC---------------------------------
Confidence 11456788999999988876543 45677777632210
Q ss_pred cCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhcC
Q 023165 241 CGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIHG 278 (286)
Q Consensus 241 c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 278 (286)
+ +++.+|++||++++|+.||+.+++.
T Consensus 131 --------~----~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 131 --------T----ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred --------C----cccccCCCCCchHHHHHHHHHHHhh
Confidence 0 3467999999999999999999764
No 16
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.58 E-value=5.9e-07 Score=75.12 Aligned_cols=117 Identities=19% Similarity=0.164 Sum_probs=72.9
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCC-CccchhhhhhccCCccc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPI-GCSAVYLTLFQSLNEMD 160 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lppl-g~~P~~~~~~~~~~~~~ 160 (286)
.-++++| .+|.||.... ..+ .++..+++...|+++...+++ ++++++||. +..|..
T Consensus 67 ~~d~vii-~~G~ND~~~~---~~~-------~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~~----------- 123 (185)
T cd01832 67 RPDLVTL-LAGGNDILRP---GTD-------PDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPFR----------- 123 (185)
T ss_pred CCCEEEE-eccccccccC---CCC-------HHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchhH-----------
Confidence 3368999 9999998641 111 224555666677777666775 888888887 322211
Q ss_pred ccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcc
Q 023165 161 YDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSAR 240 (286)
Q Consensus 161 ~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~ 240 (286)
...+.....+|+.|++..++ . ++.++|++..+. + .
T Consensus 124 -------~~~~~~~~~~n~~l~~~a~~----~---~v~~vd~~~~~~----------~-~-------------------- 158 (185)
T cd01832 124 -------RRVRARLAAYNAVIRAVAAR----Y---GAVHVDLWEHPE----------F-A-------------------- 158 (185)
T ss_pred -------HHHHHHHHHHHHHHHHHHHH----c---CCEEEecccCcc----------c-C--------------------
Confidence 12234567777777766443 2 466777743311 0 0
Q ss_pred cCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 241 CGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 241 c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
. ..++.-|++||+++||++||+.+++
T Consensus 159 ----------~-~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 159 ----------D-PRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred ----------C-ccccccCCCCCChhHHHHHHHHHhh
Confidence 0 1123359999999999999999875
No 17
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.58 E-value=9.5e-07 Score=75.21 Aligned_cols=131 Identities=12% Similarity=0.155 Sum_probs=81.1
Q ss_pred ccCeEEEeeccchhhhhhhccCC---chhhHhhhHHHHHHHHHHHHHHHHhcCcc-EEEEeCCC-CCCccchhhhhhccC
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGE---SINQLRASVPLVVKAITNATRLLIEEGAV-ELVVPGNF-PIGCSAVYLTLFQSL 156 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~---s~~~~~~~v~~~i~~~~~~v~~L~~~Gar-~~~v~~lp-plg~~P~~~~~~~~~ 156 (286)
.-.+++| .+|+||+........ ........++...+++.+.|+++.+.+.+ +|+|++++ |.. ...
T Consensus 68 ~~d~V~i-~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~-----~~~---- 137 (204)
T cd04506 68 KADVITI-TIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFY-----VYF---- 137 (204)
T ss_pred cCCEEEE-EecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCccc-----ccc----
Confidence 4478999 999999976431110 11222334456777888888888876543 57777653 321 100
Q ss_pred CcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCC
Q 023165 157 NEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFN 236 (286)
Q Consensus 157 ~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~ 236 (286)
.-....++.++.||..+++... ++ .++.++|+++.+..-
T Consensus 138 --------~~~~~~~~~~~~~n~~~~~~a~----~~--~~v~~vd~~~~~~~~--------------------------- 176 (204)
T cd04506 138 --------PNITEINDIVNDWNEASQKLAS----QY--KNAYFVPIFDLFSDG--------------------------- 176 (204)
T ss_pred --------chHHHHHHHHHHHHHHHHHHHH----hC--CCeEEEehHHhhcCC---------------------------
Confidence 0012356778888877766543 22 247788887653210
Q ss_pred CCcccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 237 NSARCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 237 ~~~~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
+ +..++..|++||+++||++||+.+++
T Consensus 177 ------------~--~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 177 ------------Q--NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred ------------c--ccccccccCcCCCHHHHHHHHHHHHh
Confidence 0 12235579999999999999999875
No 18
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.56 E-value=1.2e-06 Score=73.20 Aligned_cols=122 Identities=16% Similarity=0.210 Sum_probs=75.8
Q ss_pred cCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCccccc
Q 023165 83 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 162 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d 162 (286)
-++++| .+|.||..... + .++..+.+...|+.+.+.|++ ++++..+|....+..
T Consensus 60 ~d~v~i-~~G~ND~~~~~----~-------~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~------------- 113 (183)
T cd04501 60 PAVVII-MGGTNDIIVNT----S-------LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWK------------- 113 (183)
T ss_pred CCEEEE-EeccCccccCC----C-------HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccc-------------
Confidence 478899 99999986421 1 123455566667777778876 555566665432221
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcccC
Q 023165 163 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARCG 242 (286)
Q Consensus 163 ~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c~ 242 (286)
.+....+.....||..+++...+ . ++.++|+++.+.+...
T Consensus 114 --~~~~~~~~~~~~~n~~~~~~a~~----~---~v~~vd~~~~~~~~~~------------------------------- 153 (183)
T cd04501 114 --PQWLRPANKLKSLNRWLKDYARE----N---GLLFLDFYSPLLDERN------------------------------- 153 (183)
T ss_pred --hhhcchHHHHHHHHHHHHHHHHH----c---CCCEEechhhhhcccc-------------------------------
Confidence 01123355667788776665433 2 4778999877543110
Q ss_pred CCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 243 HTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 243 ~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
......+..|++||+++||++||+.+.+
T Consensus 154 -------~~~~~~~~~DgvHp~~~Gy~~~a~~i~~ 181 (183)
T cd04501 154 -------VGLKPGLLTDGLHPSREGYRVMAPLAEK 181 (183)
T ss_pred -------ccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 0111335579999999999999999875
No 19
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.56 E-value=1.8e-06 Score=73.78 Aligned_cols=56 Identities=11% Similarity=0.051 Sum_probs=36.9
Q ss_pred CeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCC
Q 023165 84 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIG 144 (286)
Q Consensus 84 sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg 144 (286)
.+++| .+|.||+...... .. .....++...+.+...++++.+.|+ ++++.++||..
T Consensus 76 ~~vii-~~G~ND~~~~~~~-~~--~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~ 131 (204)
T cd01830 76 RTVII-LEGVNDIGASGTD-FA--AAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFE 131 (204)
T ss_pred CEEEE-ecccccccccccc-cc--cCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCC
Confidence 57888 9999998653211 00 1112344567777888888888887 57778888753
No 20
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=98.55 E-value=5.6e-07 Score=74.60 Aligned_cols=120 Identities=18% Similarity=0.185 Sum_probs=77.5
Q ss_pred cCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhc-CccEEEEeCCCCCCccchhhhhhccCCcccc
Q 023165 83 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEE-GAVELVVPGNFPIGCSAVYLTLFQSLNEMDY 161 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~-Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~ 161 (286)
-.+++| ++|.||..... + .+...+.+.+.++++.+. ...+++++++||..-.+.
T Consensus 52 pd~v~i-~~G~ND~~~~~----~-------~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~------------- 106 (174)
T cd01841 52 PSKVFL-FLGTNDIGKEV----S-------SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE------------- 106 (174)
T ss_pred CCEEEE-EeccccCCCCC----C-------HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc-------------
Confidence 378888 99999985421 2 123455666666777654 456789999887642221
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCccc
Q 023165 162 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARC 241 (286)
Q Consensus 162 d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c 241 (286)
+....+.....||+.+++...+ + .+.++|+++.+.+- + +
T Consensus 107 ----~~~~~~~~~~~~n~~l~~~a~~----~---~~~~id~~~~~~~~-----------~--------~----------- 145 (174)
T cd01841 107 ----IKTRSNTRIQRLNDAIKELAPE----L---GVTFIDLNDVLVDE-----------F--------G----------- 145 (174)
T ss_pred ----cccCCHHHHHHHHHHHHHHHHH----C---CCEEEEcHHHHcCC-----------C--------C-----------
Confidence 1123355678888888765433 2 37789998874310 0 0
Q ss_pred CCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 242 GHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 242 ~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
+....+..|++||+++||++||+.+.+
T Consensus 146 ---------~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 146 ---------NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred ---------CccccccCCCcccCHHHHHHHHHHHHh
Confidence 001135689999999999999999864
No 21
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.54 E-value=1.4e-06 Score=77.13 Aligned_cols=159 Identities=13% Similarity=0.083 Sum_probs=84.1
Q ss_pred cCeEEEeeccchhhhhhhcc-----C-----------CchhhHhhhHHHHHHHHHHHHHHHHhc-CccEEEEeCCCCCCc
Q 023165 83 KSLFFVGEIGGNDYNYRAFV-----G-----------ESINQLRASVPLVVKAITNATRLLIEE-GAVELVVPGNFPIGC 145 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~-----~-----------~s~~~~~~~v~~~i~~~~~~v~~L~~~-Gar~~~v~~lpplg~ 145 (286)
-++++| +||+||+...... . ..........+...+++.+.|++|.+. .--+|+|++.|++--
T Consensus 81 ~dlV~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~ 159 (259)
T cd01823 81 TDLVTI-TIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFP 159 (259)
T ss_pred CCEEEE-EECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEeccccccc
Confidence 489999 9999998653110 0 001112334556677777777877754 345699999887521
Q ss_pred cchhhhhhcc--CCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCccccc
Q 023165 146 SAVYLTLFQS--LNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAV 223 (286)
Q Consensus 146 ~P~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~ 223 (286)
.-...... ....-. .....+..++....+|..+++.. +++.+.++.++|++..|. ..
T Consensus 160 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ln~~i~~~a----~~~~~~~v~fvD~~~~f~--------------~~ 218 (259)
T cd01823 160 --PDGGDCDKSCSPGTPL-TPADRPELNQLVDKLNALIRRAA----ADAGDYKVRFVDTDAPFA--------------GH 218 (259)
T ss_pred --CCCCCcccccccCCCC-CHHHHHHHHHHHHHHHHHHHHHH----HHhCCceEEEEECCCCcC--------------CC
Confidence 00000000 000000 00111334555666666665554 333335688899976532 12
Q ss_pred ccccCCCCCCCCCCCcccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 224 KACCGGGGPYNFNNSARCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 224 ~aCc~~g~~~n~~~~~~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
..|.... .+. .. .+....+.-|.+||+++||+.||+.+.+
T Consensus 219 ~~~~~~~---------~~~--~~---~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 219 RACSPDP---------WSR--SV---LDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred ccccCCC---------ccc--cc---cCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 2333211 000 00 0122335579999999999999999865
No 22
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.45 E-value=2e-06 Score=72.38 Aligned_cols=133 Identities=12% Similarity=0.108 Sum_probs=77.8
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHh--cCccEEEEeCCCCCCccchhhhhhccCCcc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIE--EGAVELVVPGNFPIGCSAVYLTLFQSLNEM 159 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~--~Gar~~~v~~lpplg~~P~~~~~~~~~~~~ 159 (286)
+-++++| ++|.||....... .. .. .+...+.+...|+++.+ .|+ ++++++.||++........ ..
T Consensus 63 ~pd~vii-~~G~ND~~~~~~~-~~-~~----~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~-~~---- 129 (199)
T cd01838 63 QPDLVTI-FFGANDAALPGQP-QH-VP----LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSL-ED---- 129 (199)
T ss_pred CceEEEE-EecCccccCCCCC-Cc-cc----HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhh-cc----
Confidence 4579999 9999998653210 00 01 22344455555565555 455 5788888776532211000 00
Q ss_pred cccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCc
Q 023165 160 DYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSA 239 (286)
Q Consensus 160 ~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~ 239 (286)
........++....||..+.+..+ ++ .+.++|+++.+... ..
T Consensus 130 ---~~~~~~~~~~~~~~~~~~~~~~a~----~~---~~~~iD~~~~~~~~----------~~------------------ 171 (199)
T cd01838 130 ---GGSQPGRTNELLKQYAEACVEVAE----EL---GVPVIDLWTAMQEE----------AG------------------ 171 (199)
T ss_pred ---ccCCccccHHHHHHHHHHHHHHHH----Hh---CCcEEEHHHHHHhc----------cC------------------
Confidence 011234456777888877666543 32 36788998775431 00
Q ss_pred ccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 240 RCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 240 ~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
....++.|++||+++||++||+.+.+
T Consensus 172 ------------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 172 ------------WLESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred ------------chhhhcCCCCCcCHhHHHHHHHHHHh
Confidence 01124579999999999999999864
No 23
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.40 E-value=2.7e-06 Score=69.45 Aligned_cols=119 Identities=16% Similarity=0.121 Sum_probs=75.7
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDY 161 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~ 161 (286)
.-.+++| .+|+||.... . ......+...+.+.+.|+.+...+ +++++.+||..-.+..
T Consensus 61 ~~d~vvi-~~G~ND~~~~---~----~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~------------ 118 (179)
T PF13472_consen 61 KPDLVVI-SFGTNDVLNG---D----ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRD------------ 118 (179)
T ss_dssp TCSEEEE-E--HHHHCTC---T----TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTT------------
T ss_pred CCCEEEE-Eccccccccc---c----cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccc------------
Confidence 3368999 9999999763 0 112334567778888888888888 8888888876432211
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCccc
Q 023165 162 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARC 241 (286)
Q Consensus 162 d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c 241 (286)
.+..........+|+.+++.. +++ .+.++|++..+.+ +.
T Consensus 119 ---~~~~~~~~~~~~~~~~~~~~a----~~~---~~~~id~~~~~~~----~~--------------------------- 157 (179)
T PF13472_consen 119 ---PKQDYLNRRIDRYNQAIRELA----KKY---GVPFIDLFDAFDD----HD--------------------------- 157 (179)
T ss_dssp ---THTTCHHHHHHHHHHHHHHHH----HHC---TEEEEEHHHHHBT----TT---------------------------
T ss_pred ---ccchhhhhhHHHHHHHHHHHH----HHc---CCEEEECHHHHcc----cc---------------------------
Confidence 112344566777787776654 333 5779999887432 00
Q ss_pred CCCCcccCCCCCCceecCCCChhHHHHHHH
Q 023165 242 GHTGSRACENPSTHANWDGIHLTESAYRHV 271 (286)
Q Consensus 242 ~~~~~~~C~~~~~y~fwD~~HPT~~~h~~i 271 (286)
.....+++.|++|||++||++|
T Consensus 158 --------~~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 158 --------GWFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp --------SCBHTCTBTTSSSBBHHHHHHH
T ss_pred --------ccchhhcCCCCCCcCHHHhCcC
Confidence 0111346699999999999986
No 24
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.36 E-value=2e-06 Score=72.93 Aligned_cols=132 Identities=11% Similarity=0.054 Sum_probs=79.4
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDY 161 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~ 161 (286)
+-++++| .+|.||....... ...-++...+++.+.|+++.+.|++ +++++.||.. .+ .
T Consensus 65 ~pdlVii-~~G~ND~~~~~~~------~~~~~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~---~~----~------- 122 (198)
T cd01821 65 PGDYVLI-QFGHNDQKPKDPE------YTEPYTTYKEYLRRYIAEARAKGAT-PILVTPVTRR---TF----D------- 122 (198)
T ss_pred CCCEEEE-ECCCCCCCCCCCC------CCCcHHHHHHHHHHHHHHHHHCCCe-EEEECCcccc---cc----C-------
Confidence 3489999 9999998653210 0111345566777777888888886 5555554421 11 0
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCccc
Q 023165 162 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARC 241 (286)
Q Consensus 162 d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c 241 (286)
.+ ...+.....||+.+++..++. .+.++|+++.+.+..+.- |- .. .
T Consensus 123 ---~~-~~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~---g~-~~----------~--------- 168 (198)
T cd01821 123 ---EG-GKVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAI---GP-EK----------S--------- 168 (198)
T ss_pred ---CC-CcccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHh---Ch-Hh----------H---------
Confidence 00 012334466777766654432 367899999988765421 11 00 0
Q ss_pred CCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 242 GHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 242 ~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
. . .. .++..|++||++.||++||+.+++
T Consensus 169 -~-~-----~~-~~~~~DgvHp~~~G~~~~a~~i~~ 196 (198)
T cd01821 169 -K-K-----YF-PEGPGDNTHFSEKGADVVARLVAE 196 (198)
T ss_pred -H-h-----hC-cCCCCCCCCCCHHHHHHHHHHHHh
Confidence 0 0 00 245679999999999999999875
No 25
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.35 E-value=6e-06 Score=74.19 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=38.6
Q ss_pred CeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCcc--EEEEeCCCCC
Q 023165 84 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAV--ELVVPGNFPI 143 (286)
Q Consensus 84 sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar--~~~v~~lppl 143 (286)
.+++| ++|+||..... .. . .....++..-+++.+.|+.|.+...+ +|+++++|++
T Consensus 124 ~lVtI-~lGgND~C~g~-~d-~--~~~tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 124 ALVIY-SMIGNDVCNGP-ND-T--INHTTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred eEEEE-EeccchhhcCC-Cc-c--ccCcCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 78888 99999996531 00 0 00123445667778888889888755 8999999995
No 26
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.31 E-value=6.2e-06 Score=69.55 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=67.7
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDY 161 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~ 161 (286)
+-++++| .+|.||....... ....... ...+.+...++++ +.++ +++++++||+.-..
T Consensus 69 ~pd~V~i-~~G~ND~~~~~~~-~~~~~~~----~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~-------------- 126 (193)
T cd01835 69 VPNRLVL-SVGLNDTARGGRK-RPQLSAR----AFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK-------------- 126 (193)
T ss_pred CCCEEEE-EecCcccccccCc-ccccCHH----HHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc--------------
Confidence 3478999 9999999754210 0001111 2222222223322 2344 47787877653110
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCccc
Q 023165 162 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARC 241 (286)
Q Consensus 162 d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c 241 (286)
....+.....+|+.+++..++ + .+.++|+++.+.+. + ..
T Consensus 127 -----~~~~~~~~~~~n~~~~~~a~~----~---~~~~vd~~~~~~~~---~---~~----------------------- 165 (193)
T cd01835 127 -----MPYSNRRIARLETAFAEVCLR----R---DVPFLDTFTPLLNH---P---QW----------------------- 165 (193)
T ss_pred -----cchhhHHHHHHHHHHHHHHHH----c---CCCeEeCccchhcC---c---HH-----------------------
Confidence 012245566777777665433 2 35678887654321 0 00
Q ss_pred CCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 242 GHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 242 ~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
...++..|++||+++||++||+.+++
T Consensus 166 ----------~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 166 ----------RRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred ----------HHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 01223359999999999999999875
No 27
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.30 E-value=9.9e-06 Score=67.87 Aligned_cols=117 Identities=15% Similarity=0.098 Sum_probs=66.8
Q ss_pred cCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCc-cEEEEeCCCCCCccchhhhhhccCCcccc
Q 023165 83 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPGNFPIGCSAVYLTLFQSLNEMDY 161 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Ga-r~~~v~~lpplg~~P~~~~~~~~~~~~~~ 161 (286)
-++++| .+|.||..... ..+ .+...+++.+.|+++.+.+. .++++.+.||......
T Consensus 68 pd~Vii-~~G~ND~~~~~--~~~-------~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~------------- 124 (188)
T cd01827 68 PNIVII-KLGTNDAKPQN--WKY-------KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG------------- 124 (188)
T ss_pred CCEEEE-EcccCCCCCCC--Ccc-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC-------------
Confidence 379999 99999986421 111 12334556666676666553 4777777766432100
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCccc
Q 023165 162 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARC 241 (286)
Q Consensus 162 d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c 241 (286)
.. ...+.....+|+.+++. .+++ .+.++|+++.+. .
T Consensus 125 ---~~-~~~~~~~~~~~~~~~~~----a~~~---~~~~vD~~~~~~-------------~-------------------- 160 (188)
T cd01827 125 ---GF-INDNIIKKEIQPMIDKI----AKKL---NLKLIDLHTPLK-------------G-------------------- 160 (188)
T ss_pred ---Cc-cchHHHHHHHHHHHHHH----HHHc---CCcEEEcccccc-------------C--------------------
Confidence 11 11133445566555544 3332 355667654210 0
Q ss_pred CCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 242 GHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 242 ~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
. + .++-|++||++++|++||+.+++
T Consensus 161 -~--------~--~~~~Dg~Hpn~~G~~~~A~~i~~ 185 (188)
T cd01827 161 -K--------P--ELVPDWVHPNEKGAYILAKVVYK 185 (188)
T ss_pred -C--------c--cccCCCCCcCHHHHHHHHHHHHH
Confidence 0 0 13469999999999999999875
No 28
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.28 E-value=4.5e-06 Score=71.90 Aligned_cols=118 Identities=19% Similarity=0.242 Sum_probs=72.2
Q ss_pred cCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcC-ccEEEEeCCCCCCccchhhhhhccCCcccc
Q 023165 83 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEG-AVELVVPGNFPIGCSAVYLTLFQSLNEMDY 161 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~G-ar~~~v~~lpplg~~P~~~~~~~~~~~~~~ 161 (286)
-.+++| ++|+||+.... + .+...+.+...|++|.+.. -.+|++++++|.+..|
T Consensus 90 pd~VvI-~~G~ND~~~~~----~-------~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~-------------- 143 (214)
T cd01820 90 PKVVVL-LIGTNNIGHTT----T-------AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP-------------- 143 (214)
T ss_pred CCEEEE-EecccccCCCC----C-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc--------------
Confidence 478899 99999985321 2 2244566667777777653 3468888887754321
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCccc
Q 023165 162 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARC 241 (286)
Q Consensus 162 d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c 241 (286)
..+.+....+|+.+++.+ ++. ..+.++|++..+.+. -|
T Consensus 144 ------~~~~~~~~~~n~~l~~~~----~~~--~~v~~vd~~~~~~~~------~g------------------------ 181 (214)
T cd01820 144 ------NPLRERNAQVNRLLAVRY----DGL--PNVTFLDIDKGFVQS------DG------------------------ 181 (214)
T ss_pred ------hhHHHHHHHHHHHHHHHh----cCC--CCEEEEeCchhhccc------CC------------------------
Confidence 112334556676665433 222 257788886654310 00
Q ss_pred CCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 242 GHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 242 ~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
.....++.|++||+++||++||+.+.+
T Consensus 182 ---------~~~~~~~~DGlHpn~~Gy~~~a~~l~~ 208 (214)
T cd01820 182 ---------TISHHDMPDYLHLTAAGYRKWADALHP 208 (214)
T ss_pred ---------CcCHhhcCCCCCCCHHHHHHHHHHHHH
Confidence 001124579999999999999999865
No 29
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.25 E-value=6e-06 Score=68.30 Aligned_cols=118 Identities=16% Similarity=0.161 Sum_probs=71.9
Q ss_pred cCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCc-cEEEEeCCCCCCccchhhhhhccCCcccc
Q 023165 83 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPGNFPIGCSAVYLTLFQSLNEMDY 161 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Ga-r~~~v~~lpplg~~P~~~~~~~~~~~~~~ 161 (286)
-++++| .+|.||+... .+ .+...+.+.+.|+++.+.+. .+++++.+||. |..
T Consensus 51 p~~vvi-~~G~ND~~~~----~~-------~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~~~------------ 103 (171)
T cd04502 51 PRRVVL-YAGDNDLASG----RT-------PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---PAR------------ 103 (171)
T ss_pred CCEEEE-EEecCcccCC----CC-------HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---Ccc------------
Confidence 368999 9999997532 12 23456677777777777643 35777666542 110
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCccc
Q 023165 162 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARC 241 (286)
Q Consensus 162 d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c 241 (286)
...+.....+|+.+++... +. ..+.++|+++.+.+. + +
T Consensus 104 ------~~~~~~~~~~n~~~~~~a~----~~--~~v~~vD~~~~~~~~-----------~--------~----------- 141 (171)
T cd04502 104 ------WALRPKIRRFNALLKELAE----TR--PNLTYIDVASPMLDA-----------D--------G----------- 141 (171)
T ss_pred ------hhhHHHHHHHHHHHHHHHh----cC--CCeEEEECcHHHhCC-----------C--------C-----------
Confidence 1112335667766665532 22 246788887664310 0 0
Q ss_pred CCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 242 GHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 242 ~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
. ...+++..|++||+++||++||+.+.+
T Consensus 142 -~-------~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 142 -K-------PRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred -C-------cChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 0 012456689999999999999999864
No 30
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.21 E-value=2.5e-05 Score=64.60 Aligned_cols=23 Identities=22% Similarity=0.232 Sum_probs=20.1
Q ss_pred ceecCCCChhHHHHHHHHHHHhc
Q 023165 255 HANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 255 y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
++.-|++||+++||++||+.+.+
T Consensus 152 ~~~~DgvHpn~~G~~~~a~~i~~ 174 (177)
T cd01822 152 LMQSDGIHPNAEGQPIIAENVWP 174 (177)
T ss_pred hhCCCCCCcCHHHHHHHHHHHHH
Confidence 35579999999999999999875
No 31
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.12 E-value=1e-05 Score=67.63 Aligned_cols=125 Identities=15% Similarity=0.025 Sum_probs=73.3
Q ss_pred CeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhc-CccEEEEeCCCCCCccchhhhhhccCCccccc
Q 023165 84 SLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEE-GAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD 162 (286)
Q Consensus 84 sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~-Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d 162 (286)
++++| .+|.||..... .+ .+...+++...|+++.+. ...+|++++.||....+.
T Consensus 58 d~Vii-~~G~ND~~~~~---~~-------~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~-------------- 112 (189)
T cd01825 58 DLVIL-SYGTNEAFNKQ---LN-------ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTG-------------- 112 (189)
T ss_pred CEEEE-ECCCcccccCC---CC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCC--------------
Confidence 78999 99999975421 11 234556666677777663 456688888766432211
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcccC
Q 023165 163 RNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSARCG 242 (286)
Q Consensus 163 ~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~c~ 242 (286)
.+....+.....+|..+.+. .++. .+.++|+++.+.+. |+.
T Consensus 113 --~~~~~~~~~~~~~~~~~~~~----a~~~---~v~~vd~~~~~~~~-----------------~~~------------- 153 (189)
T cd01825 113 --AGRWRTPPGLDAVIAAQRRV----AKEE---GIAFWDLYAAMGGE-----------------GGI------------- 153 (189)
T ss_pred --CCCcccCCcHHHHHHHHHHH----HHHc---CCeEEeHHHHhCCc-----------------chh-------------
Confidence 01111223345666655554 3333 26788988774211 000
Q ss_pred CCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 243 HTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 243 ~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
.......++..|++||+++||++||+.+.+
T Consensus 154 -----~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~ 183 (189)
T cd01825 154 -----WQWAEPGLARKDYVHLTPRGYERLANLLYE 183 (189)
T ss_pred -----hHhhcccccCCCcccCCcchHHHHHHHHHH
Confidence 000112345679999999999999999864
No 32
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.10 E-value=5.5e-05 Score=63.00 Aligned_cols=46 Identities=13% Similarity=0.145 Sum_probs=32.5
Q ss_pred cCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCc-cEEEEeCCCCC
Q 023165 83 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGA-VELVVPGNFPI 143 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Ga-r~~~v~~lppl 143 (286)
-.+++| .+|.||.... . ...+++.+.|++|.+... .+|++++.||.
T Consensus 58 pd~vii-~~G~ND~~~~----------~----~~~~~~~~~i~~i~~~~p~~~iil~~~~~~ 104 (177)
T cd01844 58 ADLYII-DCGPNIVGAE----------A----MVRERLGPLVKGLRETHPDTPILLVSPRYC 104 (177)
T ss_pred CCEEEE-EeccCCCccH----------H----HHHHHHHHHHHHHHHHCcCCCEEEEecCCC
Confidence 378999 9999996321 0 456777788888887664 46777777664
No 33
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=97.98 E-value=3.3e-05 Score=65.42 Aligned_cols=44 Identities=18% Similarity=0.172 Sum_probs=30.8
Q ss_pred cCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEe
Q 023165 83 KSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVP 138 (286)
Q Consensus 83 ~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~ 138 (286)
-++++| .+|.||.... .+ .+...+++...++++.+.|++.+++.
T Consensus 72 pd~Vii-~~GtND~~~~----~~-------~~~~~~~l~~li~~~~~~~~~~ill~ 115 (191)
T PRK10528 72 PRWVLV-ELGGNDGLRG----FP-------PQQTEQTLRQIIQDVKAANAQPLLMQ 115 (191)
T ss_pred CCEEEE-EeccCcCccC----CC-------HHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 378999 9999997432 12 23456667777777878888877663
No 34
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=97.86 E-value=9.5e-05 Score=60.07 Aligned_cols=23 Identities=17% Similarity=0.133 Sum_probs=19.8
Q ss_pred ceecCCCChhHHHHHHHHHHHhc
Q 023165 255 HANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 255 y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
++..|++||+++||+++|+.+.+
T Consensus 126 ~~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 126 WFYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hhcCCCCCCChhhHHHHHHHHHH
Confidence 34569999999999999999864
No 35
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=97.75 E-value=0.00019 Score=59.28 Aligned_cols=21 Identities=19% Similarity=0.077 Sum_probs=19.2
Q ss_pred ecCCCChhHHHHHHHHHHHhc
Q 023165 257 NWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 257 fwD~~HPT~~~h~~ia~~~~~ 277 (286)
+.|++||++++|++||+.+++
T Consensus 146 ~~DgiHPn~~G~~~iA~~l~~ 166 (169)
T cd01831 146 IGCDWHPTVAGHQKIAKHLLP 166 (169)
T ss_pred cCCCCCCCHHHHHHHHHHHHH
Confidence 579999999999999999875
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=97.41 E-value=0.00055 Score=58.32 Aligned_cols=137 Identities=12% Similarity=0.034 Sum_probs=85.3
Q ss_pred ccCeEEEeeccchhhhhhhccC-CchhhHhhhHHHHHHHHHHHHHHHHhc-CccEEEEeCCCCCCccchhhhhhccCCcc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVG-ESINQLRASVPLVVKAITNATRLLIEE-GAVELVVPGNFPIGCSAVYLTLFQSLNEM 159 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~-~s~~~~~~~v~~~i~~~~~~v~~L~~~-Gar~~~v~~lpplg~~P~~~~~~~~~~~~ 159 (286)
.-.+++| ++|+||-...--.. .....+.+| ++++++.++-|-+. --.+|++.+-||+...-....... +
T Consensus 68 ~p~lvtV-ffGaNDs~l~~~~~~~~hvPl~Ey----~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e-~--- 138 (245)
T KOG3035|consen 68 QPVLVTV-FFGANDSCLPEPSSLGQHVPLEEY----KDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQE-P--- 138 (245)
T ss_pred CceEEEE-EecCccccCCCCCCCCCccCHHHH----HHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhcc-c---
Confidence 4478999 99999975421000 111233444 44455555555544 356788888888876543332111 0
Q ss_pred cccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCc
Q 023165 160 DYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSA 239 (286)
Q Consensus 160 ~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~ 239 (286)
.-.-.++.|+....|++.+.+...++ ++.++|.++.+++. +
T Consensus 139 ---~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~------~----------------------- 179 (245)
T KOG3035|consen 139 ---YVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQES------D----------------------- 179 (245)
T ss_pred ---hhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhc------c-----------------------
Confidence 01123468999999999888776655 35677876665531 0
Q ss_pred ccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 240 RCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 240 ~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
+..+-.|||++|.|..|++++.+++++
T Consensus 180 -----------dw~~~~ltDGLHlS~~G~~ivf~Ei~k 206 (245)
T KOG3035|consen 180 -----------DWQTSCLTDGLHLSPKGNKIVFDEILK 206 (245)
T ss_pred -----------cHHHHHhccceeeccccchhhHHHHHH
Confidence 111225799999999999999999876
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=96.93 E-value=0.0065 Score=51.92 Aligned_cols=21 Identities=29% Similarity=0.461 Sum_probs=19.3
Q ss_pred cCCCChhHHHHHHHHHHHhcC
Q 023165 258 WDGIHLTESAYRHVANGLIHG 278 (286)
Q Consensus 258 wD~~HPT~~~h~~ia~~~~~~ 278 (286)
+|++||+.++++.||+.+.+.
T Consensus 187 ~Dg~H~n~~Gy~~~a~~l~~~ 207 (216)
T COG2755 187 EDGLHPNAKGYQALAEALAEV 207 (216)
T ss_pred CCCCCcCHhhHHHHHHHHHHH
Confidence 999999999999999998754
No 38
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=96.51 E-value=0.16 Score=47.26 Aligned_cols=78 Identities=17% Similarity=0.033 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHHHHhcchhhHHhhcccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCcc
Q 023165 54 DSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAV 133 (286)
Q Consensus 54 ~~l~~Qi~~f~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar 133 (286)
-+|-.|-+...+.+++...- +--...-|+.| |||+||+-..-. +. .+....++.-.+.|.++++-|.+.=-|
T Consensus 160 ~Dlp~QAr~Lv~rik~~~~i----~~~~dWKLi~I-fIG~ND~c~~c~-~~--~~~~~~~~~~~~~i~~Al~~L~~nvPR 231 (397)
T KOG3670|consen 160 EDLPDQARDLVSRIKKDKEI----NMKNDWKLITI-FIGTNDLCAYCE-GP--ETPPSPVDQHKRNIRKALEILRDNVPR 231 (397)
T ss_pred hhhHHHHHHHHHHHHhccCc----ccccceEEEEE-Eeccchhhhhcc-CC--CCCCCchhHHHHHHHHHHHHHHhcCCc
Confidence 46777777666555433211 11235579999 999999976431 11 111233445556788889999888777
Q ss_pred EEEEeC
Q 023165 134 ELVVPG 139 (286)
Q Consensus 134 ~~~v~~ 139 (286)
.+|++-
T Consensus 232 ~iV~lv 237 (397)
T KOG3670|consen 232 TIVSLV 237 (397)
T ss_pred eEEEEe
Confidence 766543
No 39
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.87 E-value=0.051 Score=49.21 Aligned_cols=136 Identities=21% Similarity=0.209 Sum_probs=79.4
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCcc---EEEEeCCCCCCccchhhhhhccCCc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAV---ELVVPGNFPIGCSAVYLTLFQSLNE 158 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar---~~~v~~lpplg~~P~~~~~~~~~~~ 158 (286)
.=+.++| .+|.||...+...+ ..... --+...+++.+-|++|.+.-.+ +|+.+++|+.-
T Consensus 177 ~~a~vVV-~lGaND~q~~~~gd-~~~kf--~S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r-------------- 238 (354)
T COG2845 177 KPAAVVV-MLGANDRQDFKVGD-VYEKF--RSDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR-------------- 238 (354)
T ss_pred CccEEEE-EecCCCHHhcccCC-eeeec--CchHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc--------------
Confidence 4467778 89999998764222 11100 0124455566666666654433 67888887741
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCC
Q 023165 159 MDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNS 238 (286)
Q Consensus 159 ~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~ 238 (286)
.+.+++-..++|....+.++.+. | + ++|+++.|-+. +... | ...| +
T Consensus 239 --------~~~l~~dm~~ln~iy~~~vE~~~----g-k--~i~i~d~~v~e---~G~~-f--------~~~~--~----- 284 (354)
T COG2845 239 --------KKKLNADMVYLNKIYSKAVEKLG----G-K--FIDIWDGFVDE---GGKD-F--------VTTG--V----- 284 (354)
T ss_pred --------ccccchHHHHHHHHHHHHHHHhC----C-e--EEEeccccccc---CCce-e--------EEec--c-----
Confidence 24567778899999888877664 2 2 34554443221 1110 1 0011 0
Q ss_pred cccCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 239 ARCGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 239 ~~c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
..-..+=++.-=|++|.|.+|-+.+|.++++
T Consensus 285 --------D~NGq~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 285 --------DINGQPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred --------ccCCceEEEeccCCceechhhHHHHHHHHHH
Confidence 0011233556679999999999999998865
No 40
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=93.12 E-value=1.2 Score=37.39 Aligned_cols=116 Identities=16% Similarity=0.219 Sum_probs=45.3
Q ss_pred ccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcC-ccEEEEeCCCCCCccchhhhhhccCCccc
Q 023165 82 KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEG-AVELVVPGNFPIGCSAVYLTLFQSLNEMD 160 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~G-ar~~~v~~lpplg~~P~~~~~~~~~~~~~ 160 (286)
+.++|++ ..|.| + +.. .+..++...|++|.+.= -.-|+++....- |.
T Consensus 59 ~a~~~~l-d~~~N-----~----~~~-------~~~~~~~~fv~~iR~~hP~tPIllv~~~~~---~~------------ 106 (178)
T PF14606_consen 59 DADLIVL-DCGPN-----M----SPE-------EFRERLDGFVKTIREAHPDTPILLVSPIPY---PA------------ 106 (178)
T ss_dssp --SEEEE-EESHH-----C----CTT-------THHHHHHHHHHHHHTT-SSS-EEEEE-------TT------------
T ss_pred CCCEEEE-EeecC-----C----CHH-------HHHHHHHHHHHHHHHhCCCCCEEEEecCCc---cc------------
Confidence 4489999 99999 1 111 23444555666666543 455666552221 10
Q ss_pred ccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCCcccccccccCCCCCCCCCCCcc
Q 023165 161 YDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGFSNGAVKACCGGGGPYNFNNSAR 240 (286)
Q Consensus 161 ~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf~~~~~~aCc~~g~~~n~~~~~~ 240 (286)
...........+.+|..+++.+++++++ ..-++++++-..++ |- .
T Consensus 107 ---~~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~ll----------g~-d-------------------- 151 (178)
T PF14606_consen 107 ---GYFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELL----------GD-D-------------------- 151 (178)
T ss_dssp ---TTS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS----------------------------------
T ss_pred ---cccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhc----------Cc-c--------------------
Confidence 1122233456788999999999998754 34466666553321 11 0
Q ss_pred cCCCCcccCCCCCCceecCCCChhHHHHHHHHHHHhc
Q 023165 241 CGHTGSRACENPSTHANWDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 241 c~~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 277 (286)
.-..-|++|||..||..||+.+..
T Consensus 152 -------------~e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 152 -------------HEATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp -------------------------------------
T ss_pred -------------cccccccccccccccccccccccc
Confidence 113479999999999999998753
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=80.94 E-value=24 Score=29.62 Aligned_cols=20 Identities=35% Similarity=0.479 Sum_probs=18.2
Q ss_pred cCCCChhHHHHHHHHHHHhc
Q 023165 258 WDGIHLTESAYRHVANGLIH 277 (286)
Q Consensus 258 wD~~HPT~~~h~~ia~~~~~ 277 (286)
.|++|..+.+|+.|++.+++
T Consensus 161 ~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHH
Confidence 69999999999999998864
No 42
>PLN02757 sirohydrochlorine ferrochelatase
Probab=74.11 E-value=11 Score=30.69 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=42.5
Q ss_pred HHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 023165 121 TNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYA 200 (286)
Q Consensus 121 ~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~ 200 (286)
.+.|++|.+.|+++|+| +|.++.... .....+.+.+.++++++|+.+|++.
T Consensus 61 ~eal~~l~~~g~~~vvV--------vP~FL~~G~---------------------H~~~DIp~~v~~~~~~~p~~~i~~~ 111 (154)
T PLN02757 61 KDAFGRCVEQGASRVIV--------SPFFLSPGR---------------------HWQEDIPALTAEAAKEHPGVKYLVT 111 (154)
T ss_pred HHHHHHHHHCCCCEEEE--------EEhhhcCCc---------------------chHhHHHHHHHHHHHHCCCcEEEEC
Confidence 45667788889999998 577764211 1245678888899999999998866
Q ss_pred e---chHHHHHHHh
Q 023165 201 D---YYGAAMRFYH 211 (286)
Q Consensus 201 D---~~~~~~~i~~ 211 (286)
. .+..+.+++.
T Consensus 112 ~pLG~~p~l~~ll~ 125 (154)
T PLN02757 112 APIGLHELMVDVVN 125 (154)
T ss_pred CCCCCCHHHHHHHH
Confidence 4 3335555443
No 43
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=73.92 E-value=13 Score=32.37 Aligned_cols=60 Identities=23% Similarity=0.409 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHH-HHHHHHHHHHhhCCC
Q 023165 116 VVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNT-MLKAELHKLRQKYPH 194 (286)
Q Consensus 116 ~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~-~L~~~l~~l~~~~~~ 194 (286)
+++-+.+.++.|...|.|+|+|+|- . ++ |. .|...++++++++++
T Consensus 84 ~~~~l~di~~sl~~~Gf~~ivivng---------------H-------gG------------N~~~l~~~~~~l~~~~~~ 129 (237)
T PF02633_consen 84 LIALLRDILRSLARHGFRRIVIVNG---------------H-------GG------------NIAALEAAARELRQEYPG 129 (237)
T ss_dssp HHHHHHHHHHHHHHHT--EEEEEES---------------S-------TT------------HHHHHHHHHHHHHHHGCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEC---------------C-------Hh------------HHHHHHHHHHHHHhhCCC
Confidence 4445567778888999999999881 1 11 33 567777888888889
Q ss_pred cEEEEEechHHHHHH
Q 023165 195 ANIIYADYYGAAMRF 209 (286)
Q Consensus 195 ~~i~~~D~~~~~~~i 209 (286)
.++.++|.+.+....
T Consensus 130 ~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 130 VKVFVINWWQLAEDE 144 (237)
T ss_dssp -EEEEEEGGGCSHCH
T ss_pred cEEEEeechhccchh
Confidence 999999998886654
No 44
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=68.57 E-value=2.4 Score=39.35 Aligned_cols=71 Identities=15% Similarity=0.148 Sum_probs=52.2
Q ss_pred hcccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhh
Q 023165 80 YFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTL 152 (286)
Q Consensus 80 ~~~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~ 152 (286)
...+.++.- |+|+||+...-.. .+.......+......+..++..++.++.-+|+..+.|.++..|..+..
T Consensus 96 ~~~~~~~~~-~a~gnd~A~gga~-~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~ 166 (370)
T COG3240 96 ADPNGLYIH-WAGGNDLAVGGAR-STEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYF 166 (370)
T ss_pred cCcccccCc-ccccccHhhhccc-cccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHH
Confidence 457788999 9999999864311 0000111334455667788999999999999999999999999988754
No 45
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=66.53 E-value=22 Score=32.38 Aligned_cols=64 Identities=13% Similarity=0.230 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCC
Q 023165 115 LVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPH 194 (286)
Q Consensus 115 ~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~ 194 (286)
..++.+.+.++++.++|.+.|+++++|.. .-+. + .+..+. |.-+...++.+++.+|+
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~-----g------------s~A~~~-----~g~v~~air~iK~~~p~ 104 (314)
T cd00384 48 LSVDSLVEEAEELADLGIRAVILFGIPEH-KDEI-----G------------SEAYDP-----DGIVQRAIRAIKEAVPE 104 (314)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCC-----c------------ccccCC-----CChHHHHHHHHHHhCCC
Confidence 45688889999999999999999999642 1111 1 011111 34567778888988887
Q ss_pred cEEEEEec
Q 023165 195 ANIIYADY 202 (286)
Q Consensus 195 ~~i~~~D~ 202 (286)
.-| ..|+
T Consensus 105 l~v-i~Dv 111 (314)
T cd00384 105 LVV-ITDV 111 (314)
T ss_pred cEE-EEee
Confidence 643 3343
No 46
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=62.28 E-value=28 Score=31.86 Aligned_cols=64 Identities=16% Similarity=0.103 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCC
Q 023165 115 LVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPH 194 (286)
Q Consensus 115 ~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~ 194 (286)
..++.+.+.++.+.++|.+.|+++++|+. .-+ .+ .+..+. |.-+...++.+++.+|+
T Consensus 58 ~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~-----~g------------s~A~~~-----~g~v~~air~iK~~~pd 114 (322)
T PRK13384 58 LPESALADEIERLYALGIRYVMPFGISHH-KDA-----KG------------SDTWDD-----NGLLARMVRTIKAAVPE 114 (322)
T ss_pred ECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCC-----Cc------------ccccCC-----CChHHHHHHHHHHHCCC
Confidence 45678889999999999999999999641 111 11 111111 45667788889999988
Q ss_pred cEEEEEec
Q 023165 195 ANIIYADY 202 (286)
Q Consensus 195 ~~i~~~D~ 202 (286)
.-| +.|+
T Consensus 115 l~v-i~DV 121 (322)
T PRK13384 115 MMV-IPDI 121 (322)
T ss_pred eEE-Eeee
Confidence 643 3343
No 47
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=62.18 E-value=25 Score=32.14 Aligned_cols=64 Identities=13% Similarity=0.230 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCC
Q 023165 115 LVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPH 194 (286)
Q Consensus 115 ~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~ 194 (286)
..++.+.+.++++.++|.+.|+++++|.. +...+ .+..+. |.-+...++.+++++|+
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~------Kd~~g------------s~A~~~-----~g~v~rair~iK~~~p~ 112 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL------KDEDG------------SEAYNP-----DGLVQRAIRAIKKAFPE 112 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC------CCccc------------ccccCC-----CCHHHHHHHHHHHhCCC
Confidence 35677888999999999999999998432 21111 111111 44567778888988988
Q ss_pred cEEEEEec
Q 023165 195 ANIIYADY 202 (286)
Q Consensus 195 ~~i~~~D~ 202 (286)
.-| ..|+
T Consensus 113 l~v-i~DV 119 (323)
T PRK09283 113 LGV-ITDV 119 (323)
T ss_pred cEE-EEee
Confidence 643 4444
No 48
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=60.59 E-value=28 Score=31.87 Aligned_cols=65 Identities=9% Similarity=0.205 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCc
Q 023165 116 VVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHA 195 (286)
Q Consensus 116 ~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~ 195 (286)
.++.+.+.++++.++|.+.|+++++.+ |..+...+ .+..+. |.-+...++.+++.+|+.
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~g------------s~a~~~-----~g~v~~air~iK~~~pdl 113 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEEG------------SEAYNP-----DGLVQRAIRAIKKAFPDL 113 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS-------------GGGGST-----TSHHHHHHHHHHHHSTTS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcch------------hcccCC-----CChHHHHHHHHHHhCCCc
Confidence 467788899999999999999999843 22222111 111111 456677888889999986
Q ss_pred EEEEEec
Q 023165 196 NIIYADY 202 (286)
Q Consensus 196 ~i~~~D~ 202 (286)
-| ..|+
T Consensus 114 ~v-i~Dv 119 (324)
T PF00490_consen 114 LV-ITDV 119 (324)
T ss_dssp EE-EEEE
T ss_pred EE-EEec
Confidence 43 4444
No 49
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=60.29 E-value=18 Score=33.00 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhcCccEEEEeCCCCCC-ccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCC
Q 023165 115 LVVKAITNATRLLIEEGAVELVVPGNFPIG-CSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYP 193 (286)
Q Consensus 115 ~~i~~~~~~v~~L~~~Gar~~~v~~lpplg-~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~ 193 (286)
..++.+.+.++++.++|.+.|+++++|+-. .-+.. + .+..+. |.-+.+.++.+++++|
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~----g------------s~a~~~-----~g~v~~air~iK~~~p 106 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRS----G------------SAADDE-----DGPVIQAIKLIREEFP 106 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCc----c------------ccccCC-----CChHHHHHHHHHHhCC
Confidence 456788899999999999999999996521 22210 0 000010 4566778888888888
Q ss_pred CcEEEEEec
Q 023165 194 HANIIYADY 202 (286)
Q Consensus 194 ~~~i~~~D~ 202 (286)
+.-| +.|+
T Consensus 107 dl~v-i~Dv 114 (320)
T cd04824 107 ELLI-ACDV 114 (320)
T ss_pred CcEE-EEee
Confidence 8643 3443
No 50
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=60.22 E-value=28 Score=31.86 Aligned_cols=66 Identities=12% Similarity=0.203 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCC
Q 023165 115 LVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPH 194 (286)
Q Consensus 115 ~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~ 194 (286)
..++.+.+.++.+.++|.+.|++++++| |..+...+ .+..+. |.-+...++.+++++|+
T Consensus 51 ~s~d~l~~~v~~~~~~Gi~~v~lFgv~~----~~~KD~~g------------s~A~~~-----~g~v~~air~iK~~~p~ 109 (320)
T cd04823 51 LSIDELLKEAEEAVDLGIPAVALFPVTP----PELKSEDG------------SEAYNP-----DNLVCRAIRAIKEAFPE 109 (320)
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEecCCC----cccCCccc------------ccccCC-----CChHHHHHHHHHHhCCC
Confidence 4568888999999999999999999854 11111111 011111 44567778888889988
Q ss_pred cEEEEEec
Q 023165 195 ANIIYADY 202 (286)
Q Consensus 195 ~~i~~~D~ 202 (286)
.-| +.|+
T Consensus 110 l~v-i~DV 116 (320)
T cd04823 110 LGI-ITDV 116 (320)
T ss_pred cEE-EEee
Confidence 643 4444
No 51
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=58.27 E-value=30 Score=30.98 Aligned_cols=94 Identities=17% Similarity=0.225 Sum_probs=54.5
Q ss_pred cccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCccc
Q 023165 81 FKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMD 160 (286)
Q Consensus 81 ~~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~ 160 (286)
.++-+|=+ +|--||--..-+. +......--++++.+.+..|.+.|.|.++++++|+ |..+...++ .+|
T Consensus 38 ~~nliyPl-FI~e~~dd~~pI~-----SmPg~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~----~~~Kd~~gs--~Ad 105 (340)
T KOG2794|consen 38 PANLIYPL-FIHEGEDDFTPID-----SMPGIYRLGVNRLKEELAPLVAKGLRSVILFGVVP----EALKDPTGS--EAD 105 (340)
T ss_pred hhheeeeE-EEecCcccccccc-----cCCchhHHHHHHHHHHHHHHHHhccceEEEecCCC----ccccCcccc--ccc
Confidence 45567777 7776654321111 11112223466788999999999999999999975 333221111 111
Q ss_pred ccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 023165 161 YDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADY 202 (286)
Q Consensus 161 ~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~ 202 (286)
- =|.-.-..+..|+..+|+.- +..|+
T Consensus 106 s---------------~~gpvi~ai~~lr~~fPdL~-i~cDV 131 (340)
T KOG2794|consen 106 S---------------DNGPVIRAIRLLRDRFPDLV-IACDV 131 (340)
T ss_pred C---------------CCCcHHHHHHHHHHhCcceE-EEeee
Confidence 0 13344556777888899864 34554
No 52
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=54.51 E-value=31 Score=25.39 Aligned_cols=51 Identities=27% Similarity=0.307 Sum_probs=34.1
Q ss_pred HHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 023165 122 NATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYAD 201 (286)
Q Consensus 122 ~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D 201 (286)
+.+++|.+.|+++++| .|.++... ......+.+.+.+++.++++.+|.+.+
T Consensus 48 ~~l~~l~~~g~~~v~v--------vPlfl~~G---------------------~h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 48 EALDELAAQGATRIVV--------VPLFLLAG---------------------GHVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHcCCCEEEE--------EeeEeCCC---------------------ccccccHHHHHHHHHHHCCCeEEEecC
Confidence 4567788889999988 36665321 011245667777777788988887654
No 53
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=52.42 E-value=67 Score=28.47 Aligned_cols=108 Identities=19% Similarity=0.280 Sum_probs=58.7
Q ss_pred cccCeEEEeeccchhhhhhhccC-------Cch----hhHh-----hhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCC
Q 023165 81 FKKSLFFVGEIGGNDYNYRAFVG-------ESI----NQLR-----ASVPLVVKAITNATRLLIEEGAVELVVPGNFPIG 144 (286)
Q Consensus 81 ~~~sL~~i~~iG~ND~~~~~~~~-------~s~----~~~~-----~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg 144 (286)
.+-++++| ..|..-.+...-++ +.. .... -.++++++.+...++.|.+..-.-=+|+++.|+
T Consensus 100 ~~ad~~ii-TLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV- 177 (251)
T PF08885_consen 100 EEADVFII-TLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPV- 177 (251)
T ss_pred HhCCEEEE-eCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccc-
Confidence 34478888 89988776432111 000 1111 345677888888888888887766677788886
Q ss_pred ccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHH
Q 023165 145 CSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAM 207 (286)
Q Consensus 145 ~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~ 207 (286)
|...+... . | + -..|..++ ..|...+.++.+.++ ++.||=.|.+++
T Consensus 178 --rl~~T~~~----~--d--~--~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~ 223 (251)
T PF08885_consen 178 --RLIATFRD----R--D--G--LVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVM 223 (251)
T ss_pred --hhhccccc----c--c--c--hhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhcc
Confidence 43332111 0 1 1 12233333 246666777776543 345555555443
No 54
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=51.97 E-value=8.6 Score=28.61 Aligned_cols=52 Identities=21% Similarity=0.202 Sum_probs=34.6
Q ss_pred HHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 023165 122 NATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYAD 201 (286)
Q Consensus 122 ~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D 201 (286)
+.+++|.+.|+++|+|+ |.++... ......+.+.+.+++.++|+.+|.+..
T Consensus 41 ~~l~~l~~~g~~~ivvv--------P~fL~~G---------------------~h~~~DIp~~l~~~~~~~~~~~v~~~~ 91 (105)
T PF01903_consen 41 EALERLVAQGARRIVVV--------PYFLFPG---------------------YHVKRDIPEALAEARERHPGIEVRVAP 91 (105)
T ss_dssp HCCHHHHCCTCSEEEEE--------EESSSSS---------------------HHHHCHHHHHHCHHHHCSTTEEEEE--
T ss_pred HHHHHHHHcCCCeEEEE--------eeeecCc---------------------cchHhHHHHHHHHHHhhCCceEEEECC
Confidence 34578888999999884 6665311 111234777888889999998888765
Q ss_pred c
Q 023165 202 Y 202 (286)
Q Consensus 202 ~ 202 (286)
.
T Consensus 92 p 92 (105)
T PF01903_consen 92 P 92 (105)
T ss_dssp -
T ss_pred C
Confidence 4
No 55
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=51.62 E-value=13 Score=26.56 Aligned_cols=21 Identities=19% Similarity=0.185 Sum_probs=15.7
Q ss_pred HHHHHHHHHhcCccEEEEeCC
Q 023165 120 ITNATRLLIEEGAVELVVPGN 140 (286)
Q Consensus 120 ~~~~v~~L~~~Gar~~~v~~l 140 (286)
+.+.+.+|.++||+.|+|..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 355678899999999999764
No 56
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=51.46 E-value=57 Score=29.73 Aligned_cols=60 Identities=12% Similarity=0.218 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCC
Q 023165 115 LVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPH 194 (286)
Q Consensus 115 ~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~ 194 (286)
..++.+.+.++++.++|.+-|+++++|+- ..+...++. .++ -|.-++..++.+++.+|+
T Consensus 58 ~s~d~l~~~~~~~~~lGi~av~LFgvp~~----~~Kd~~gs~---A~~--------------~~givqravr~ik~~~p~ 116 (330)
T COG0113 58 YSLDRLVEEAEELVDLGIPAVILFGVPDD----SKKDETGSE---AYD--------------PDGIVQRAVRAIKEAFPE 116 (330)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEeCCCcc----cccCccccc---ccC--------------CCChHHHHHHHHHHhCCC
Confidence 45788889999999999999999999862 222111100 011 134567778888888885
Q ss_pred c
Q 023165 195 A 195 (286)
Q Consensus 195 ~ 195 (286)
.
T Consensus 117 l 117 (330)
T COG0113 117 L 117 (330)
T ss_pred e
Confidence 4
No 57
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=47.78 E-value=67 Score=24.23 Aligned_cols=49 Identities=22% Similarity=0.251 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 023165 121 TNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYA 200 (286)
Q Consensus 121 ~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~ 200 (286)
.+.+++|.+.|.++++| .|.++.. + . |...+...+.+++++ |+.+|.+.
T Consensus 48 ~~~l~~l~~~g~~~i~v--------vP~fL~~------------G---------~-h~~~i~~~~~~~~~~-~~~~i~~~ 96 (117)
T cd03414 48 PEALERLRALGARRVVV--------LPYLLFT------------G---------V-LMDRIEEQVAELAAE-PGIEFVLA 96 (117)
T ss_pred HHHHHHHHHcCCCEEEE--------EechhcC------------C---------c-hHHHHHHHHHHHHhC-CCceEEEC
Confidence 45667788899999988 4666531 0 0 112356667777776 77777653
No 58
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=46.58 E-value=1.1e+02 Score=26.20 Aligned_cols=112 Identities=12% Similarity=0.110 Sum_probs=59.6
Q ss_pred ccCeEEEeeccchhhhhhhc-cC---CchhhHhhhHHHHHHHHHHHHHHHHhcCc--cEEEEeCCCCCCccchhhhhhcc
Q 023165 82 KKSLFFVGEIGGNDYNYRAF-VG---ESINQLRASVPLVVKAITNATRLLIEEGA--VELVVPGNFPIGCSAVYLTLFQS 155 (286)
Q Consensus 82 ~~sL~~i~~iG~ND~~~~~~-~~---~s~~~~~~~v~~~i~~~~~~v~~L~~~Ga--r~~~v~~lpplg~~P~~~~~~~~ 155 (286)
..+++++ ..|..+.-.... .. ... ...+.....+..+.+.+.++..... .++++.+++|...- .....
T Consensus 100 ~pdvvV~-nsG~W~~~~~~~~~~~~~~~~-~~~~~y~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~~--~~~~~-- 173 (263)
T PF13839_consen 100 RPDVVVI-NSGLWYLRRSGFIEWGDNKEI-NPLEAYRNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHFE--GGDWN-- 173 (263)
T ss_pred CCCEEEE-EcchhhhhcchhcccCCCcCc-chHHHHHHHHHHHHHHHHhhhccccccceEEEEecCCcccc--ccccc--
Confidence 6689999 899988754211 00 111 1223334556667777777776554 67777777664311 11000
Q ss_pred CCcccccCCCcc-----chhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEechHHHHHHHh
Q 023165 156 LNEMDYDRNGCL-----KAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYH 211 (286)
Q Consensus 156 ~~~~~~d~~~~~-----~~~~~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 211 (286)
..+.|. ...+.....+|..+...+ ..+.++.++|+++.+.....
T Consensus 174 ------~gg~c~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ldi~~~~~~~r~ 222 (263)
T PF13839_consen 174 ------SGGSCNPPRREEITNEQIDELNEALREAL------KKNSRVHLLDIFTMLSSFRP 222 (263)
T ss_pred ------cCCCcCcccccCCCHHHHHHHHHHHHHHh------hcCCCceeeeecchhhhccc
Confidence 012344 122344555555554443 14567889999666555443
No 59
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=44.43 E-value=28 Score=26.19 Aligned_cols=23 Identities=22% Similarity=0.241 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhcCccEEEEeCC
Q 023165 118 KAITNATRLLIEEGAVELVVPGN 140 (286)
Q Consensus 118 ~~~~~~v~~L~~~Gar~~~v~~l 140 (286)
+.+.+.+++|.++||+.|+|+.+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45677889999999999999764
No 60
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=39.41 E-value=78 Score=28.74 Aligned_cols=20 Identities=30% Similarity=0.456 Sum_probs=13.8
Q ss_pred hhcccCeEEEeeccchhhhhhh
Q 023165 79 TYFKKSLFFVGEIGGNDYNYRA 100 (286)
Q Consensus 79 ~~~~~sL~~i~~iG~ND~~~~~ 100 (286)
.+... .=++ +||.||+..+.
T Consensus 193 ~~~~~-~DF~-SIGtNDLtQy~ 212 (293)
T PF02896_consen 193 EFAKE-VDFF-SIGTNDLTQYT 212 (293)
T ss_dssp HHHTT-SSEE-EEEHHHHHHHH
T ss_pred HHHHH-CCEE-EEChhHHHHHH
Confidence 33344 5566 89999998764
No 61
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=37.64 E-value=1.2e+02 Score=27.17 Aligned_cols=63 Identities=11% Similarity=0.031 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHhcchhhHHhhcccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEE
Q 023165 57 SVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELV 136 (286)
Q Consensus 57 ~~Qi~~f~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~ 136 (286)
..++++|+++.+... ...+...++| -+|+|=+.. +...+.+...|..|++.|.|-|+
T Consensus 16 ~~e~~~~l~~f~~~~-------~~~~~~f~VI-K~GG~~~~~---------------~~~~~~l~~dla~L~~lGl~~Vl 72 (271)
T cd04236 16 PREARYWLTQFQIAM-------PNDWPAFAVL-EVDHSVFRS---------------LEMVQSLSFGLAFLQRMDMKLLV 72 (271)
T ss_pred HHHHHHHHHHhhccC-------CCCCCCEEEE-EEChhhhcC---------------chhHHHHHHHHHHHHHCCCeEEE
Confidence 466677766544321 1135678888 999875521 13456677888999999999999
Q ss_pred EeCCCC
Q 023165 137 VPGNFP 142 (286)
Q Consensus 137 v~~lpp 142 (286)
|.+-.|
T Consensus 73 VHGggp 78 (271)
T cd04236 73 VMGLSA 78 (271)
T ss_pred EeCCCh
Confidence 999877
No 62
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.26 E-value=96 Score=27.23 Aligned_cols=65 Identities=14% Similarity=0.191 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhcchhhHHhhcccCeEEEeeccchhhhhhhccCCchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEE
Q 023165 58 VQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVV 137 (286)
Q Consensus 58 ~Qi~~f~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~ND~~~~~~~~~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v 137 (286)
.+...|+..++... ..+++||++| |++..+.... ..++..+++...|.++.+.|.|-+.+
T Consensus 14 ~~t~~fl~Fl~~~a--------~~ad~lyilG-----Difd~w~g~~-------~~~~~~~~V~~~l~~~a~~G~~v~~i 73 (237)
T COG2908 14 ALTAFFLDFLREEA--------AQADALYILG-----DIFDGWIGDD-------EPPQLHRQVAQKLLRLARKGTRVYYI 73 (237)
T ss_pred HHHHHHHHHHHhcc--------ccCcEEEEec-----hhhhhhhcCC-------cccHHHHHHHHHHHHHHhcCCeEEEe
Confidence 55566666554321 1367999995 6776663211 23456667777888899999888888
Q ss_pred eCCCC
Q 023165 138 PGNFP 142 (286)
Q Consensus 138 ~~lpp 142 (286)
.+-=+
T Consensus 74 ~GN~D 78 (237)
T COG2908 74 HGNHD 78 (237)
T ss_pred cCchH
Confidence 77554
No 63
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=36.78 E-value=91 Score=26.01 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHHHHHHHhcCccEEEEeC
Q 023165 112 SVPLVVKAITNATRLLIEEGAVELVVPG 139 (286)
Q Consensus 112 ~v~~~i~~~~~~v~~L~~~Gar~~~v~~ 139 (286)
-+..+-..+.+.|.+|++.|.+.|+.-+
T Consensus 23 ~~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 23 KIQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred hHHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 4456777889999999999999887744
No 64
>PRK13660 hypothetical protein; Provisional
Probab=34.43 E-value=2.4e+02 Score=23.73 Aligned_cols=59 Identities=20% Similarity=0.377 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHHHHHHHHHHHHHHhhC
Q 023165 113 VPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKY 192 (286)
Q Consensus 113 v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fN~~L~~~l~~l~~~~ 192 (286)
+..+-..+.+.|..|++.|.+.|++-+ .+| +-..-.+.+.+|++++
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg--alG--------------------------------~d~wAaEvvl~LK~~y 69 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG--QLG--------------------------------VELWAAEVVLELKEEY 69 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC--cch--------------------------------HHHHHHHHHHHHHhhC
Confidence 344556778999999999999888744 221 1122245667788888
Q ss_pred CCcEEEEEechHH
Q 023165 193 PHANIIYADYYGA 205 (286)
Q Consensus 193 ~~~~i~~~D~~~~ 205 (286)
|+++++.+=.|.=
T Consensus 70 p~lkL~~~~PF~~ 82 (182)
T PRK13660 70 PDLKLAVITPFEE 82 (182)
T ss_pred CCeEEEEEeCccc
Confidence 8888877765543
No 65
>COG0646 MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism]
Probab=32.93 E-value=2.3e+02 Score=25.83 Aligned_cols=111 Identities=16% Similarity=0.160 Sum_probs=63.4
Q ss_pred ccccccCCccCCccchhhcccccccccCCCHHHHHHHHHHHHHHHhcchhhHHhhc-ccCeEEEeeccchh-hhhhhccC
Q 023165 26 VNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYF-KKSLFFVGEIGGND-YNYRAFVG 103 (286)
Q Consensus 26 ~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~~~~~~~~-~~sL~~i~~iG~ND-~~~~~~~~ 103 (286)
.+|.-+||-+...+.+.. +..-.....++.++...-..-.++.. +.+.+.. .+-.|+.|.+|.-- .....
T Consensus 60 ~aY~eAGADiIeTNTFga---t~i~lady~led~v~~in~~aa~iAR--~aA~~~~~~k~rfVaGsiGPt~k~~~~~--- 131 (311)
T COG0646 60 RAYIEAGADIIETNTFGA---TTIKLADYGLEDKVYEINQKAARIAR--RAADEAGDPKPRFVAGSIGPTNKTLSIS--- 131 (311)
T ss_pred HHHHhccCcEEEecCCCc---chhhHhhhChHHHHHHHHHHHHHHHH--HHHhhcCCCCceEEEEeccCcCCcCCcC---
Confidence 467888888765554421 10111335666766544333223321 1111111 14678887887522 11111
Q ss_pred CchhhHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCCccc
Q 023165 104 ESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSA 147 (286)
Q Consensus 104 ~s~~~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg~~P 147 (286)
.. -....+.++..++.+++.|++-|+-=|+|=++-++-+.=
T Consensus 132 --~~-~~v~fd~l~~ay~eq~~~Li~gG~D~iLiET~~D~l~~K 172 (311)
T COG0646 132 --PD-FAVTFDELVEAYREQVEGLIDGGADLILIETIFDTLNAK 172 (311)
T ss_pred --Cc-ccccHHHHHHHHHHHHHHHHhCCCcEEEEehhccHHHHH
Confidence 00 022367899999999999999999999999988865543
No 66
>COG1903 CbiD Cobalamin biosynthesis protein CbiD [Coenzyme metabolism]
Probab=31.98 E-value=3.4e+02 Score=25.51 Aligned_cols=90 Identities=14% Similarity=0.095 Sum_probs=54.3
Q ss_pred ccCCccCCccchhhcccccccccCCCHHHHHHHHHHHHHHHhcchhhHHhhcccCeEEEeeccch--hhhhhhccCCchh
Q 023165 30 VAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGN--DYNYRAFVGESIN 107 (286)
Q Consensus 30 ~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~~~~~~~~~~sL~~i~~iG~N--D~~~~~~~~~s~~ 107 (286)
+||-.++..|+. -.|+|-+.++..+...+...+ ....+.+++ -.|.+ |+...++..
T Consensus 167 vGGISILGTTGI---------v~P~S~~a~~~si~~~l~~~r-------~~~~~~iv~--~~Gn~g~~~a~~~~~~---- 224 (367)
T COG1903 167 VGGISILGTTGI---------VEPMSEEAYLASIRSELDVAR-------AAGLDHVVF--CPGNTGEDYARKLFIL---- 224 (367)
T ss_pred ccceEeecCCcc---------cCcCChHHHHHHHHHHHHHHH-------hcCCcEEEE--ccChhHHHHHHHhcCC----
Confidence 567777766642 256788888887776654332 112333333 35655 444333221
Q ss_pred hHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCC
Q 023165 108 QLRASVPLVVKAITNATRLLIEEGAVELVVPGNFP 142 (286)
Q Consensus 108 ~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpp 142 (286)
....+-.+.+-+...|+...++|.+++++++.|-
T Consensus 225 -~~~~~v~~~n~vG~~l~~a~~~~~~~i~i~G~pG 258 (367)
T COG1903 225 -PEQAIVKMGNFVGSMLKEARELGVKEILIFGHPG 258 (367)
T ss_pred -chHHHhhHHHHHHHHHHHHHhcCCCEEEEEcChH
Confidence 1222345566677778888889999999999864
No 67
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=31.50 E-value=22 Score=28.30 Aligned_cols=16 Identities=25% Similarity=0.183 Sum_probs=13.9
Q ss_pred hcCccEEEEeCCCCCC
Q 023165 129 EEGAVELVVPGNFPIG 144 (286)
Q Consensus 129 ~~Gar~~~v~~lpplg 144 (286)
..|||+|+++|+|-+.
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 5799999999998764
No 68
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=29.47 E-value=83 Score=24.78 Aligned_cols=25 Identities=32% Similarity=0.352 Sum_probs=22.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhC
Q 023165 168 KAPNAFARYHNTMLKAELHKLRQKY 192 (286)
Q Consensus 168 ~~~~~~~~~fN~~L~~~l~~l~~~~ 192 (286)
+..+++++.||..|.+.|.++++++
T Consensus 71 ~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 71 AQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4567889999999999999999875
No 69
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=28.48 E-value=22 Score=24.03 Aligned_cols=9 Identities=33% Similarity=0.892 Sum_probs=7.0
Q ss_pred eecCCCChh
Q 023165 256 ANWDGIHLT 264 (286)
Q Consensus 256 ~fwD~~HPT 264 (286)
-|||.+||.
T Consensus 52 ~~W~~l~P~ 60 (62)
T PF06812_consen 52 NYWDSLHPQ 60 (62)
T ss_pred HCCcccCCC
Confidence 368999985
No 70
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=27.66 E-value=1.5e+02 Score=20.83 Aligned_cols=66 Identities=17% Similarity=0.012 Sum_probs=32.1
Q ss_pred hcCccEEEEeCCCCCCccchhhhhhccCCcccccCCCccchhhHHHHHH---HHHHHHHHHHHHhhCCCc-EEEEEe
Q 023165 129 EEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYH---NTMLKAELHKLRQKYPHA-NIIYAD 201 (286)
Q Consensus 129 ~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d~~~~~~~~~~~~~~f---N~~L~~~l~~l~~~~~~~-~i~~~D 201 (286)
=-|||.|||+.++=..-.|....... . ..+.......-..+| -++|+++++.|+++.|+. --+++|
T Consensus 8 ~p~arSvIv~a~~Y~~~~~~~~~~~~-~------~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 8 LPGARSVIVLAFPYYPEPPPPPPPPG-P------GRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCCcEEEEEEccCCCccccccccCC-C------CCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeec
Confidence 35899999999875431111110000 0 112222222222333 346666666777777774 233455
No 71
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=27.08 E-value=45 Score=26.38 Aligned_cols=24 Identities=21% Similarity=0.141 Sum_probs=18.9
Q ss_pred CCceecCCCChhHHHHHHHHHHHh
Q 023165 253 STHANWDGIHLTESAYRHVANGLI 276 (286)
Q Consensus 253 ~~y~fwD~~HPT~~~h~~ia~~~~ 276 (286)
+.|++-|.+||..+|+-.+-+.|.
T Consensus 101 ~~yfm~D~iHlgw~GWv~vd~~i~ 124 (130)
T PF04914_consen 101 EPYFMQDTIHLGWKGWVYVDQAIY 124 (130)
T ss_dssp STTSBSSSSSB-THHHHHHHHHHH
T ss_pred CCceeeecccCchhhHHHHHHHHH
Confidence 467889999999999977777664
No 72
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.58 E-value=1.2e+02 Score=28.78 Aligned_cols=21 Identities=33% Similarity=0.588 Sum_probs=14.9
Q ss_pred HHhcCccEEEEeCCCCCCccchh
Q 023165 127 LIEEGAVELVVPGNFPIGCSAVY 149 (286)
Q Consensus 127 L~~~Gar~~~v~~lpplg~~P~~ 149 (286)
|.+.|+.+++- +-|.||.|.-
T Consensus 328 ~i~~g~~nvIc--lqPFGCmPnh 348 (420)
T COG3581 328 LIESGVDNVIC--LQPFGCMPNH 348 (420)
T ss_pred HHHcCCCceEE--ecCccCCcHH
Confidence 55667777655 5699999943
No 73
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=25.42 E-value=1.5e+02 Score=26.79 Aligned_cols=86 Identities=15% Similarity=0.239 Sum_probs=47.4
Q ss_pred HHHHHHhcCccEEEEeCCCCCCccchhhhhhccCCccccc-CCCccchhhHH------HHHH---------------HHH
Q 023165 123 ATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD-RNGCLKAPNAF------ARYH---------------NTM 180 (286)
Q Consensus 123 ~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~d-~~~~~~~~~~~------~~~f---------------N~~ 180 (286)
.+++|..+|.|.|+|..-|- ..|.++......+.-..+ .-....+..-+ ++.| -..
T Consensus 37 ~l~~L~~aGI~dI~II~~~~--~~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~~a~~fv~~~~f~l~LGDNi~~~~ 114 (286)
T COG1209 37 PLETLMLAGIRDILIVVGPE--DKPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVLIAEDFVGDDDFVLYLGDNIFQDG 114 (286)
T ss_pred HHHHHHHcCCceEEEEecCC--chhhhhhhhcCccccCcceEEEecCCCCcHHHHHHHHHhhcCCCceEEEecCceeccC
Confidence 46788899999999998873 135555444321100000 00000111111 1111 115
Q ss_pred HHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCCC
Q 023165 181 LKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGF 218 (286)
Q Consensus 181 L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yGf 218 (286)
|.+.+..+.++-+|+.|...-+ .||++||-
T Consensus 115 l~~~~~~~~~~~~ga~i~~~~V--------~dP~rfGV 144 (286)
T COG1209 115 LSELLEHFAEEGSGATILLYEV--------DDPSRYGV 144 (286)
T ss_pred hHHHHHHHhccCCCcEEEEEEc--------CCcccceE
Confidence 6677777777667887777665 59999995
No 74
>TIGR00175 mito_nad_idh isocitrate dehydrogenase, NAD-dependent, mitochondrial type. The NADP-dependent IDH of Thermus aquaticus thermophilus strain HB8 resembles these NAD-dependent IDH, except for the residues involved in cofactor specificity, much more closely than it resembles other prokaryotic NADP-dependent IDH, including that of Thermus aquaticus strain YT1.
Probab=24.40 E-value=1.2e+02 Score=28.09 Aligned_cols=39 Identities=10% Similarity=0.249 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCC
Q 023165 179 TMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 217 (286)
Q Consensus 179 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yG 217 (286)
..+++.+.++.++||++.+-..-+.++.+.++.+|..|.
T Consensus 180 glf~~~~~eva~~yp~v~~~~~~vDa~~~~lv~~P~~fd 218 (333)
T TIGR00175 180 GLFLNVCREVAKEYPDITFESMIVDNTCMQLVSRPSQFD 218 (333)
T ss_pred HHHHHHHHHHHHHCCCCeeeeeeHHHHHHHHhcCccccc
Confidence 344556666777899998888888899999999999873
No 75
>PLN00123 isocitrate dehydrogenase (NAD+)
Probab=24.22 E-value=1.2e+02 Score=28.33 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCC
Q 023165 180 MLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 217 (286)
Q Consensus 180 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yG 217 (286)
.+.+.+.++.++||++++-..=+..+.+.++.+|..|.
T Consensus 204 lf~~~~~eva~eyPdV~~~~~~VDa~~~~Lv~~P~~fD 241 (360)
T PLN00123 204 LFLESCREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFD 241 (360)
T ss_pred HHHHHHHHHHhhCCCceEeeeeHHHHHHHHhhCcccCc
Confidence 34556667778899999988889999999999999984
No 76
>PRK03437 3-isopropylmalate dehydrogenase; Provisional
Probab=23.78 E-value=1e+02 Score=28.74 Aligned_cols=37 Identities=14% Similarity=0.380 Sum_probs=31.0
Q ss_pred HHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCC
Q 023165 181 LKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 217 (286)
Q Consensus 181 L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yG 217 (286)
+++.+.++.++||++++-..-+..+.+.++.+|..|.
T Consensus 197 f~~~~~eva~~ypdV~~~~~~vDa~~~~Lv~~P~~fD 233 (344)
T PRK03437 197 WQRTVDEVAAEYPDVTVDYQHVDAATIFMVTDPSRFD 233 (344)
T ss_pred HHHHHHHHHhhCCCceEeehhHHHHHHHHhcCcccCc
Confidence 3456667788899998888888889999999999985
No 77
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=23.71 E-value=1e+02 Score=27.24 Aligned_cols=25 Identities=12% Similarity=0.234 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHhcCccEEEEeC
Q 023165 115 LVVKAITNATRLLIEEGAVELVVPG 139 (286)
Q Consensus 115 ~~i~~~~~~v~~L~~~Gar~~~v~~ 139 (286)
.++.-+.+.++.|+..|.|||+++|
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEe
Confidence 4555667778889999999999998
No 78
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=23.13 E-value=1.3e+02 Score=23.23 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=22.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhC
Q 023165 168 KAPNAFARYHNTMLKAELHKLRQKY 192 (286)
Q Consensus 168 ~~~~~~~~~fN~~L~~~l~~l~~~~ 192 (286)
++.+++.+.||..|.+.|.++++++
T Consensus 58 ~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 58 AQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4567889999999999999999876
No 79
>TIGR02089 TTC tartrate dehydrogenase. Tartrate dehydrogenase catalyzes the oxidation of both meso- and (+)-tartrate as well as a D-malate. These enzymes are closely related to the 3-isopropylmalate and isohomocitrate dehydrogenases found in TIGR00169 and TIGR02088, respectively.
Probab=22.88 E-value=1.2e+02 Score=28.26 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=30.7
Q ss_pred HHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCC
Q 023165 181 LKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 217 (286)
Q Consensus 181 L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yG 217 (286)
+++.+.++.++||++++-..=+..+.+.++.+|..|.
T Consensus 200 f~~~~~eva~~yp~v~~~~~~vD~~~~~lv~~P~~fD 236 (352)
T TIGR02089 200 WDEVFAEVAAEYPDVEWDSYHIDALAARFVLKPETFD 236 (352)
T ss_pred HHHHHHHHHhhCCCceEeeehHHHHHHHHhcChhhCc
Confidence 3455666778899998888888889999999999875
No 80
>TIGR00169 leuB 3-isopropylmalate dehydrogenase. This model will not find all isopropylmalate dehydrogenases; the enzyme from Sulfolobus sp. strain 7 is more similar to mitochondrial NAD-dependent isocitrate dehydrogenases than to other known isopropylmalate dehydrogenases and was omitted to improve the specificity of the model. It scores below the cutoff and below some enzymes known not to be isopropylmalate dehydrogenase.
Probab=22.85 E-value=1.5e+02 Score=27.70 Aligned_cols=38 Identities=16% Similarity=0.416 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCC
Q 023165 180 MLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 217 (286)
Q Consensus 180 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yG 217 (286)
..++..++..++||++++-..-+..+.+.++.+|..|.
T Consensus 197 lf~~~~~eva~~yP~I~~~~~~vDa~~~~Lv~~P~~fD 234 (349)
T TIGR00169 197 LWRKTVEEIAKEYPDVELEHQYIDNAAMQLVKSPTQFD 234 (349)
T ss_pred HHHHHHHHHHhhCCCceEEeeeHHHHHHHHHhCccCce
Confidence 44556667778899998888888889999999999873
No 81
>PRK00772 3-isopropylmalate dehydrogenase; Provisional
Probab=22.54 E-value=1.5e+02 Score=27.78 Aligned_cols=39 Identities=15% Similarity=0.365 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCC
Q 023165 179 TMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 217 (286)
Q Consensus 179 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yG 217 (286)
..+.+.+.++.++||++.+-..=+..+.+.++.+|..|.
T Consensus 199 glf~~~~~eva~eyp~i~~~~~~vDa~~~~lv~~P~~fD 237 (358)
T PRK00772 199 RLWREVVTEVAKEYPDVELSHMYVDNAAMQLVRNPKQFD 237 (358)
T ss_pred hHHHHHHHHHHhHCCCceEEEEeHHHHHHHHhhCcccCe
Confidence 344556667778899998888889999999999999874
No 82
>PLN00118 isocitrate dehydrogenase (NAD+)
Probab=21.71 E-value=1.5e+02 Score=27.91 Aligned_cols=39 Identities=13% Similarity=0.179 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCC
Q 023165 179 TMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 217 (286)
Q Consensus 179 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yG 217 (286)
...++.+.++.++||++++-..=+..+.+.++.+|..|.
T Consensus 219 glf~e~~~eva~eyPdI~~~~~~VDa~a~~Lv~~P~~fD 257 (372)
T PLN00118 219 GLFLKCCREVAEKYPEIVYEEVIIDNCCMMLVKNPALFD 257 (372)
T ss_pred HHHHHHHHHHHhhCCCceEEeeeHHHHHHHhccCcccCc
Confidence 344566677788899998888888889999999999874
No 83
>PRK08997 isocitrate dehydrogenase; Provisional
Probab=21.47 E-value=1.6e+02 Score=27.25 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=29.7
Q ss_pred HHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCC
Q 023165 181 LKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 217 (286)
Q Consensus 181 L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yG 217 (286)
+++.+.++.++||++.+-..=+..+.+.++.+|..|.
T Consensus 184 f~~~~~eva~~yP~V~~~~~~vDa~~~~lv~~P~~fd 220 (334)
T PRK08997 184 FLKVAREVALRYPDIEFEEMIVDATCMQLVMNPEQFD 220 (334)
T ss_pred HHHHHHHHHhhCCCeEEEeeeHHHHHHHHhhCcccCc
Confidence 3455566677899998877778888899999999985
No 84
>PF07555 NAGidase: beta-N-acetylglucosaminidase ; InterPro: IPR011496 This family consists of both eukaryotic and prokaryotic hyaluronidases. Human Q9HAR0 from SWISSPROT is expressed during meningioma []. Clostridium perfringens, P26831 from SWISSPROT, is involved in pathogenesis and is likely to act on connectivity tissue during gas gangrene []. It catalyses the random hydrolysis of 1->4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.; PDB: 2WB5_B 2V5C_B 2VUR_A 2V5D_A 2YDS_A 2CBI_A 2XPK_A 2CBJ_B 2J62_A 2X0Y_A ....
Probab=21.32 E-value=1.1e+02 Score=27.90 Aligned_cols=24 Identities=13% Similarity=0.101 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHhcCccEEEEe
Q 023165 115 LVVKAITNATRLLIEEGAVELVVP 138 (286)
Q Consensus 115 ~~i~~~~~~v~~L~~~Gar~~~v~ 138 (286)
.-++.+.+-++.|+++|+|.|.|+
T Consensus 88 ~d~~~L~~K~~ql~~lGvr~Fail 111 (306)
T PF07555_consen 88 EDFEALKAKFDQLYDLGVRSFAIL 111 (306)
T ss_dssp HHHHHHHHHHHHHHCTT--EEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456777888999999999999887
No 85
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=20.84 E-value=1e+02 Score=23.09 Aligned_cols=18 Identities=11% Similarity=0.148 Sum_probs=14.0
Q ss_pred HHHHHHHHhcCccEEEEe
Q 023165 121 TNATRLLIEEGAVELVVP 138 (286)
Q Consensus 121 ~~~v~~L~~~Gar~~~v~ 138 (286)
.+.+++|.+.|+|+|+|.
T Consensus 45 ~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 45 DDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 345677889999999883
No 86
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=20.58 E-value=1.4e+02 Score=27.86 Aligned_cols=36 Identities=14% Similarity=0.138 Sum_probs=29.0
Q ss_pred hHhhhHHHHHHHHHHHHHHHHhcCccEEEEeCCCCCC
Q 023165 108 QLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIG 144 (286)
Q Consensus 108 ~~~~~v~~~i~~~~~~v~~L~~~Gar~~~v~~lpplg 144 (286)
+..+++..++..+.+.++.|+++|+|.|-+ .=|.+.
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQi-Dep~l~ 195 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQL-DDTVWA 195 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe-cCcchh
Confidence 456888999999999999999999998655 445443
No 87
>PRK14025 multifunctional 3-isopropylmalate dehydrogenase/D-malate dehydrogenase; Provisional
Probab=20.35 E-value=1.9e+02 Score=26.78 Aligned_cols=39 Identities=13% Similarity=0.214 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEechHHHHHHHhCCCCCC
Q 023165 179 TMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 217 (286)
Q Consensus 179 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~P~~yG 217 (286)
..+++.+.++.++||++.+-..=+..+.++++.+|..|.
T Consensus 179 glf~e~~~eva~~yp~i~~~~~~vDa~~~~lv~~P~~fD 217 (330)
T PRK14025 179 GLFKKTFYEVAKEYPDIKAEDYYVDAMNMYIITRPQTFD 217 (330)
T ss_pred HHHHHHHHHHHhhCCCeEEEeeeHHHHHHHHhcCcccCc
Confidence 344556667778899988888888889999999999874
Done!