Query 023172
Match_columns 286
No_of_seqs 172 out of 2107
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 08:58:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023172.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023172hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02752 [acyl-carrier protein 100.0 1.4E-42 3E-47 318.5 23.6 218 64-282 32-249 (343)
2 PF00698 Acyl_transf_1: Acyl t 100.0 5.1E-43 1.1E-47 318.4 18.9 191 73-283 1-197 (318)
3 COG0331 FabD (acyl-carrier-pro 100.0 5.8E-43 1.3E-47 313.0 16.8 205 70-283 2-207 (310)
4 TIGR00128 fabD malonyl CoA-acy 100.0 1.6E-41 3.5E-46 304.3 22.7 201 71-282 2-203 (290)
5 TIGR03131 malonate_mdcH malona 100.0 1.9E-40 4.1E-45 298.5 21.2 192 72-282 1-192 (295)
6 smart00827 PKS_AT Acyl transfe 100.0 2.9E-39 6.3E-44 290.8 20.5 190 76-282 1-197 (298)
7 TIGR02813 omega_3_PfaA polyket 100.0 2.3E-38 5.1E-43 341.7 24.9 262 6-283 483-796 (2582)
8 TIGR02816 pfaB_fam PfaB family 100.0 2.8E-36 6.1E-41 287.0 14.5 192 69-282 180-402 (538)
9 COG3321 Polyketide synthase mo 100.0 5.5E-34 1.2E-38 291.6 16.2 263 4-283 442-727 (1061)
10 KOG2926 Malonyl-CoA:ACP transa 100.0 1.1E-33 2.4E-38 247.6 12.1 214 68-284 60-275 (386)
11 KOG1202 Animal-type fatty acid 100.0 2.3E-33 4.9E-38 273.9 13.9 253 7-282 436-696 (2376)
12 cd07198 Patatin Patatin-like p 92.4 0.92 2E-05 37.2 8.3 47 134-186 10-56 (172)
13 cd07205 Pat_PNPLA6_PNPLA7_NTE1 90.1 1.1 2.4E-05 36.8 6.6 95 135-240 13-112 (175)
14 cd07207 Pat_ExoU_VipD_like Exo 89.9 1.1 2.4E-05 37.2 6.6 47 135-187 12-58 (194)
15 cd07209 Pat_hypo_Ecoli_Z1214_l 88.9 1.2 2.7E-05 38.0 6.2 39 134-178 10-48 (215)
16 cd07210 Pat_hypo_W_succinogene 88.5 1.6 3.5E-05 37.5 6.7 114 134-257 12-130 (221)
17 COG1752 RssA Predicted esteras 88.5 1.4 3E-05 39.8 6.6 45 135-185 24-68 (306)
18 cd07223 Pat_PNPLA5-mammals Pat 88.0 14 0.00031 34.5 12.8 55 132-188 19-73 (405)
19 cd07227 Pat_Fungal_NTE1 Fungal 87.5 1.9 4.1E-05 38.4 6.6 44 135-184 23-66 (269)
20 cd07225 Pat_PNPLA6_PNPLA7 Pata 87.0 2.1 4.6E-05 38.8 6.8 46 135-186 28-73 (306)
21 cd07228 Pat_NTE_like_bacteria 86.2 2.4 5.2E-05 34.8 6.2 44 135-184 13-56 (175)
22 cd07229 Pat_TGL3_like Triacylg 84.9 3 6.4E-05 39.2 6.7 48 133-187 94-141 (391)
23 PRK10279 hypothetical protein; 83.2 2 4.3E-05 38.9 4.8 36 135-176 18-54 (300)
24 cd07224 Pat_like Patatin-like 82.5 7 0.00015 33.9 7.8 51 132-188 9-61 (233)
25 cd07218 Pat_iPLA2 Calcium-inde 80.9 37 0.00081 29.6 13.7 50 133-186 11-60 (245)
26 cd07204 Pat_PNPLA_like Patatin 80.4 38 0.00083 29.4 13.3 48 134-187 11-62 (243)
27 cd07206 Pat_TGL3-4-5_SDP1 Tria 79.2 6.7 0.00015 35.4 6.6 35 134-174 81-115 (298)
28 cd07231 Pat_SDP1-like Sugar-De 79.1 7.4 0.00016 35.5 6.9 47 133-186 79-125 (323)
29 cd07219 Pat_PNPLA1 Patatin-lik 77.1 10 0.00022 35.5 7.2 54 132-187 22-75 (382)
30 PRK11126 2-succinyl-6-hydroxy- 76.5 3.3 7.1E-05 35.1 3.8 32 140-177 56-87 (242)
31 cd07220 Pat_PNPLA2 Patatin-lik 76.1 16 0.00036 32.0 8.1 54 133-188 15-68 (249)
32 cd07222 Pat_PNPLA4 Patatin-lik 76.1 53 0.0011 28.6 13.0 40 134-175 11-50 (246)
33 cd07221 Pat_PNPLA3 Patatin-lik 75.8 12 0.00026 32.9 7.1 53 134-188 12-64 (252)
34 cd07230 Pat_TGL4-5_like Triacy 75.1 8.4 0.00018 36.6 6.4 45 135-186 86-130 (421)
35 cd07232 Pat_PLPL Patain-like p 73.3 9.8 0.00021 36.0 6.4 46 135-187 80-125 (407)
36 cd07208 Pat_hypo_Ecoli_yjju_li 73.1 6.1 0.00013 34.7 4.7 37 135-177 11-49 (266)
37 cd07212 Pat_PNPLA9 Patatin-lik 68.5 20 0.00044 32.5 7.1 75 137-223 14-89 (312)
38 TIGR03056 bchO_mg_che_rel puta 68.3 5.7 0.00012 34.2 3.4 30 140-175 85-114 (278)
39 PLN02824 hydrolase, alpha/beta 67.4 7.1 0.00015 34.4 3.9 30 139-174 91-120 (294)
40 TIGR02240 PHA_depoly_arom poly 66.9 7.4 0.00016 34.0 3.9 28 142-175 83-110 (276)
41 PRK08775 homoserine O-acetyltr 65.0 8.4 0.00018 35.1 4.0 30 140-174 127-156 (343)
42 PF06057 VirJ: Bacterial virul 64.7 22 0.00048 29.9 6.0 90 71-181 3-93 (192)
43 PRK00870 haloalkane dehalogena 64.5 8.6 0.00019 34.1 3.9 29 140-174 105-133 (302)
44 PF03958 Secretin_N: Bacterial 64.4 28 0.0006 24.3 5.8 33 230-262 44-76 (82)
45 PF12697 Abhydrolase_6: Alpha/ 63.4 11 0.00023 30.6 4.1 30 139-174 55-84 (228)
46 PRK06765 homoserine O-acetyltr 63.0 10 0.00022 35.6 4.2 31 138-173 148-178 (389)
47 PRK11071 esterase YqiA; Provis 62.4 11 0.00024 31.4 3.9 32 141-178 52-83 (190)
48 PRK03592 haloalkane dehalogena 61.8 11 0.00023 33.3 3.9 29 140-174 83-111 (295)
49 COG1054 Predicted sulfurtransf 60.7 28 0.00061 31.3 6.2 50 210-263 17-68 (308)
50 cd07213 Pat17_PNPLA8_PNPLA9_li 59.8 27 0.00059 31.1 6.2 53 135-189 15-67 (288)
51 PRK13604 luxD acyl transferase 58.9 13 0.00028 33.7 4.0 29 141-175 99-127 (307)
52 PLN02965 Probable pheophorbida 57.0 12 0.00026 32.2 3.4 30 140-174 61-90 (255)
53 cd07211 Pat_PNPLA8 Patatin-lik 56.5 46 0.00099 29.9 7.2 83 137-223 23-112 (308)
54 TIGR03101 hydr2_PEP hydrolase, 56.1 17 0.00038 32.2 4.2 29 140-174 89-117 (266)
55 TIGR01250 pro_imino_pep_2 prol 55.7 15 0.00032 31.3 3.7 28 142-175 88-115 (288)
56 PLN02679 hydrolase, alpha/beta 55.3 15 0.00033 33.8 3.9 27 140-172 145-171 (360)
57 TIGR01392 homoserO_Ac_trn homo 54.2 16 0.00036 33.3 3.9 30 139-174 115-145 (351)
58 TIGR03343 biphenyl_bphD 2-hydr 53.9 15 0.00032 31.9 3.4 30 140-175 91-120 (282)
59 PF00561 Abhydrolase_1: alpha/ 53.6 20 0.00044 29.5 4.1 29 140-174 34-62 (230)
60 PRK10349 carboxylesterase BioH 52.1 20 0.00043 30.7 3.9 20 154-174 73-92 (256)
61 PLN02578 hydrolase 51.7 19 0.0004 33.0 3.9 28 141-174 143-170 (354)
62 PRK10673 acyl-CoA esterase; Pr 51.2 21 0.00045 30.3 3.9 20 156-175 81-100 (255)
63 cd07217 Pat17_PNPLA8_PNPLA9_li 51.1 55 0.0012 30.2 6.8 68 156-224 41-111 (344)
64 PF09752 DUF2048: Uncharacteri 50.9 54 0.0012 30.3 6.6 34 138-177 163-196 (348)
65 TIGR02427 protocat_pcaD 3-oxoa 50.5 19 0.00041 29.8 3.5 30 141-176 70-99 (251)
66 PRK07581 hypothetical protein; 49.8 21 0.00046 32.2 3.9 25 144-174 117-142 (339)
67 PF05798 Phage_FRD3: Bacteriop 49.5 46 0.001 22.8 4.4 42 210-257 9-54 (75)
68 TIGR03695 menH_SHCHC 2-succiny 48.5 29 0.00063 28.4 4.3 20 156-175 70-89 (251)
69 PRK00175 metX homoserine O-ace 47.5 24 0.00052 32.7 4.0 31 139-175 135-166 (379)
70 PF06259 Abhydrolase_8: Alpha/ 46.5 1.3E+02 0.0029 24.8 7.8 35 68-102 17-52 (177)
71 TIGR03611 RutD pyrimidine util 46.4 26 0.00057 29.2 3.8 29 141-175 71-99 (257)
72 PF06821 Ser_hydrolase: Serine 46.3 19 0.00042 29.5 2.8 19 156-174 55-73 (171)
73 PRK06489 hypothetical protein; 46.1 34 0.00073 31.4 4.7 25 145-174 148-172 (360)
74 PLN02894 hydrolase, alpha/beta 45.8 27 0.0006 32.7 4.1 27 142-174 168-194 (402)
75 COG0596 MhpC Predicted hydrola 44.9 25 0.00054 28.6 3.4 29 140-174 78-106 (282)
76 PF01764 Lipase_3: Lipase (cla 44.2 20 0.00043 27.6 2.5 17 158-174 66-82 (140)
77 PF10369 ALS_ss_C: Small subun 42.9 83 0.0018 22.0 5.2 44 212-264 16-61 (75)
78 PRK14875 acetoin dehydrogenase 41.2 35 0.00075 30.9 3.9 29 141-175 188-216 (371)
79 TIGR01738 bioH putative pimelo 40.8 38 0.00083 27.8 3.9 19 156-174 65-83 (245)
80 PF07819 PGAP1: PGAP1-like pro 40.3 45 0.00097 28.6 4.2 19 156-174 85-103 (225)
81 PRK05855 short chain dehydroge 40.0 44 0.00096 32.3 4.7 32 140-176 83-114 (582)
82 PLN03090 auxin-responsive fami 38.9 65 0.0014 24.3 4.3 41 70-110 42-82 (104)
83 PF03959 FSH1: Serine hydrolas 38.7 39 0.00085 28.5 3.6 27 140-173 93-119 (212)
84 PLN02733 phosphatidylcholine-s 38.2 39 0.00086 32.3 3.8 30 140-175 152-181 (440)
85 PLN02211 methyl indole-3-aceta 37.9 41 0.00088 29.6 3.7 30 140-174 76-105 (273)
86 cd02407 PTH2_family Peptidyl-t 37.9 1.7E+02 0.0036 22.4 6.6 19 156-176 8-26 (115)
87 PRK05320 rhodanese superfamily 37.6 1E+02 0.0022 27.2 6.1 50 211-262 16-65 (257)
88 PRK01415 hypothetical protein; 37.5 1.2E+02 0.0026 26.6 6.5 50 211-262 18-67 (247)
89 PF02519 Auxin_inducible: Auxi 37.3 67 0.0014 24.0 4.2 42 69-110 37-78 (100)
90 cd07199 Pat17_PNPLA8_PNPLA9_li 37.2 1.4E+02 0.0031 25.8 7.1 35 156-190 34-69 (258)
91 cd07216 Pat17_PNPLA8_PNPLA9_li 36.7 1.2E+02 0.0025 27.3 6.5 35 157-191 43-78 (309)
92 COG3208 GrsT Predicted thioest 36.6 26 0.00056 30.7 2.1 18 156-173 74-91 (244)
93 cd00741 Lipase Lipase. Lipase 35.2 33 0.00072 27.0 2.5 17 158-174 30-46 (153)
94 TIGR01249 pro_imino_pep_1 prol 34.9 51 0.0011 29.3 3.9 27 142-174 87-113 (306)
95 PF00756 Esterase: Putative es 34.8 53 0.0011 28.0 3.9 19 156-174 113-133 (251)
96 cd00519 Lipase_3 Lipase (class 34.7 31 0.00067 29.3 2.4 18 157-174 129-146 (229)
97 PRK03204 haloalkane dehalogena 33.7 49 0.0011 29.1 3.6 27 141-173 92-118 (286)
98 PF11288 DUF3089: Protein of u 33.6 51 0.0011 28.1 3.4 13 156-168 95-107 (207)
99 cd02394 vigilin_like_KH K homo 32.9 1E+02 0.0022 20.1 4.3 45 209-259 16-61 (62)
100 PLN03219 uncharacterized prote 32.6 94 0.002 23.6 4.3 41 70-110 41-83 (108)
101 PF12000 Glyco_trans_4_3: Gkyc 32.4 40 0.00087 27.8 2.5 17 142-164 58-74 (171)
102 cd01819 Patatin_and_cPLA2 Pata 32.3 95 0.0021 24.8 4.7 36 135-174 11-46 (155)
103 PF10230 DUF2305: Uncharacteri 32.3 31 0.00068 30.4 2.0 22 156-177 84-105 (266)
104 PRK10749 lysophospholipase L2; 32.0 57 0.0012 29.4 3.8 18 156-173 131-148 (330)
105 PF00975 Thioesterase: Thioest 32.0 66 0.0014 26.8 4.0 18 157-174 67-84 (229)
106 cd02430 PTH2 Peptidyl-tRNA hyd 32.0 1.5E+02 0.0032 22.7 5.5 61 156-222 8-69 (115)
107 PF01734 Patatin: Patatin-like 31.3 41 0.00088 26.8 2.5 19 156-174 27-45 (204)
108 KOG4409 Predicted hydrolase/ac 31.0 54 0.0012 30.3 3.3 20 154-174 159-178 (365)
109 KOG2564 Predicted acetyltransf 30.9 43 0.00094 30.1 2.6 21 156-176 146-166 (343)
110 KOG1454 Predicted hydrolase/ac 30.3 63 0.0014 29.5 3.7 30 141-176 119-148 (326)
111 PLN03087 BODYGUARD 1 domain co 30.2 58 0.0012 31.6 3.6 26 143-174 267-292 (481)
112 PHA02857 monoglyceride lipase; 30.2 41 0.0009 29.0 2.5 19 156-174 97-115 (276)
113 cd00707 Pancreat_lipase_like P 30.0 39 0.00084 29.9 2.2 22 156-177 112-133 (275)
114 PF12695 Abhydrolase_5: Alpha/ 29.0 52 0.0011 24.9 2.6 20 156-175 61-80 (145)
115 TIGR03607 patatin-related prot 28.9 1.1E+02 0.0024 31.4 5.4 21 154-175 65-85 (739)
116 TIGR03100 hydr1_PEP hydrolase, 28.8 78 0.0017 27.7 4.0 19 156-174 100-118 (274)
117 PLN02298 hydrolase, alpha/beta 28.5 72 0.0016 28.6 3.8 19 156-174 134-152 (330)
118 PF05277 DUF726: Protein of un 28.3 80 0.0017 29.2 4.0 35 137-177 205-241 (345)
119 PRK10985 putative hydrolase; P 27.3 89 0.0019 28.1 4.2 16 156-171 131-146 (324)
120 cd07214 Pat17_isozyme_like Pat 27.0 2.4E+02 0.0051 26.0 6.9 83 156-238 43-141 (349)
121 PF05728 UPF0227: Uncharacteri 26.1 1.1E+02 0.0023 25.6 4.1 20 158-177 61-80 (187)
122 PLN03220 uncharacterized prote 26.0 1.6E+02 0.0034 22.2 4.5 21 90-110 61-81 (105)
123 COG3946 VirJ Type IV secretory 25.8 1.6E+02 0.0035 28.0 5.4 77 68-167 258-337 (456)
124 COG4188 Predicted dienelactone 25.0 65 0.0014 30.0 2.8 33 156-188 159-191 (365)
125 PF13117 Cag12: Cag pathogenic 24.9 1.9E+02 0.0041 22.2 4.9 35 231-265 72-106 (113)
126 PRK15339 type III secretion sy 23.6 1.7E+02 0.0037 28.9 5.6 85 173-260 67-163 (559)
127 TIGR03230 lipo_lipase lipoprot 23.5 1E+02 0.0022 29.6 3.8 19 156-174 119-137 (442)
128 KOG2551 Phospholipase/carboxyh 23.3 83 0.0018 27.2 2.9 29 140-175 95-123 (230)
129 PLN02385 hydrolase; alpha/beta 23.3 60 0.0013 29.5 2.3 18 157-174 163-180 (349)
130 PRK14430 acylphosphatase; Prov 23.1 1.8E+02 0.0039 21.2 4.4 26 237-262 37-65 (92)
131 cd07215 Pat17_PNPLA8_PNPLA9_li 22.9 1.5E+02 0.0032 27.0 4.8 84 156-240 40-137 (329)
132 PRK10566 esterase; Provisional 22.9 56 0.0012 27.7 1.9 18 157-174 108-125 (249)
133 COG2267 PldB Lysophospholipase 22.7 67 0.0015 28.8 2.4 18 156-173 107-124 (298)
134 PF11187 DUF2974: Protein of u 22.2 1.2E+02 0.0025 26.2 3.7 23 156-178 84-106 (224)
135 PLN02872 triacylglycerol lipas 22.2 1.7E+02 0.0037 27.4 5.2 19 156-174 160-178 (395)
136 PF01981 PTH2: Peptidyl-tRNA h 21.8 3.6E+02 0.0077 20.3 7.2 96 156-260 9-114 (116)
137 TIGR01607 PST-A Plasmodium sub 21.8 53 0.0012 29.8 1.6 17 156-172 142-158 (332)
138 PF09383 NIL: NIL domain; Int 21.6 1.4E+02 0.003 20.5 3.4 22 243-264 50-71 (76)
139 TIGR01836 PHA_synth_III_C poly 21.2 1.2E+02 0.0026 27.6 3.8 18 156-173 136-153 (350)
140 PF08026 Antimicrobial_5: Bee 20.3 53 0.0012 19.5 0.8 16 71-86 13-28 (39)
141 PRK14433 acylphosphatase; Prov 20.0 1.6E+02 0.0034 21.2 3.5 26 237-262 34-62 (87)
No 1
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=100.00 E-value=1.4e-42 Score=318.50 Aligned_cols=218 Identities=77% Similarity=1.125 Sum_probs=192.1
Q ss_pred cccCCCCcEEEEecCCCCcccccchhhhccHHHHHHHHHHHHHcCCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHHH
Q 023172 64 LFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVEL 143 (286)
Q Consensus 64 ~~~~~~~~~~fvF~Gqg~~~~~m~~~~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~~ 143 (286)
......+|++|+|||||+||+||+++|..+|.|++.+++|++++|+++.+++...+.+.+.++.++||+||++|++++++
T Consensus 32 ~~~~~~~~~a~lFpGQGsq~~gm~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~l~~~~~~qp~i~~~~~a~~~~ 111 (343)
T PLN02752 32 LFADYKPTTAFLFPGQGAQAVGMGKEAAEVPAAKALFDKASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVASLAAVEK 111 (343)
T ss_pred cccCCCCCEEEEECCCCcchhhHHHHHHhCHHHHHHHHHHHHHhCCCHHHHHhcCCHHHHhcchhhhHHHHHHHHHHHHH
Confidence 34567889999999999999999999989999999999999999999999988766666788999999999999999999
Q ss_pred HHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhc
Q 023172 144 LRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAAN 223 (286)
Q Consensus 144 l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~ 223 (286)
|+++|....++.+|++++|||+|||+|+|++|+++++|+++++..|+++|++.....+++|++|.+++.++++++++.++
T Consensus 112 l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ls~e~al~lv~~R~~~m~~~~~~~~g~m~av~g~~~~~~~~~l~~~~ 191 (343)
T PLN02752 112 LRARDGGQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSVIGLDSDKVQELCAAAN 191 (343)
T ss_pred HHhcCCCcccccCCCeeeeccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhccCCCccEEEEeCCCHHHHHHHHHHhh
Confidence 99998211111246789999999999999999999999999999999999987555689999998999999999998876
Q ss_pred ccCCCCCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCC
Q 023172 224 QEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPC 282 (286)
Q Consensus 224 ~~~~~~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~ 282 (286)
...+....++|+++|+|+++||||+++.++++.+.+++.+.++.++|+++ .|||||++
T Consensus 192 ~~~~~~~~v~IA~~Nsp~~~vIsG~~~~l~~l~~~l~~~~~~~~~~L~v~-~pfHsp~m 249 (343)
T PLN02752 192 EEVGEDDVVQIANYLCPGNYAVSGGKKGIDAVEAKAKSFKARMTVRLAVA-GAFHTSFM 249 (343)
T ss_pred hccCCCCeEEEEEEcCCCCEEEECcHHHHHHHHHHHHhcCCceEEECCCC-CCcchHHH
Confidence 54333457999999999999999999999999999998776688999999 99999965
No 2
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=100.00 E-value=5.1e-43 Score=318.35 Aligned_cols=191 Identities=37% Similarity=0.534 Sum_probs=166.9
Q ss_pred EEEecCCCCcccccchh-hhccHHHHHHHHHHHHHc----CCChHHHhhCCCC-CCCCCcccHhHHHHHHHHHHHHHHHH
Q 023172 73 AFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPK-EKLDSTIISQPAIYVTSLAAVELLRA 146 (286)
Q Consensus 73 ~fvF~Gqg~~~~~m~~~-~~~~p~~~~~~~~~~~~l----g~~~~~~~~~~~~-~~~~~~~~~q~~i~a~~~al~~~l~~ 146 (286)
+|+|||||+||+|||++ |..+|.|++.+++|++++ |+++.+.+.+++. ..+.++.+.||+||++|++++++|++
T Consensus 1 vFlFpGQGsq~~gMg~~L~~~~p~f~~~~~~~~~~l~~~~g~~l~~~l~~~~~~~~l~~~~~~qpai~~~~~al~~~l~~ 80 (318)
T PF00698_consen 1 VFLFPGQGSQYPGMGRDLYENNPVFRETIDRCDEILKELLGFSLLELLFEGPESEDLNDTEYAQPAIFAIQVALARLLRS 80 (318)
T ss_dssp EEEE--TTS--TTTTHHHHHH-HHHHHHHHHHHHHHTSHHTS-HHHHHHHTTHCHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEECCcchhhHhHHHHHHHcChhhHHHHHhhhhhhhcccccchhhhhhcccccccccchheecchhhhhhhhhhhhhcc
Confidence 69999999999999999 788899999999999875 8999999886653 56888999999999999999999999
Q ss_pred ccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhcccC
Q 023172 147 RDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEV 226 (286)
Q Consensus 147 ~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~~~~ 226 (286)
+| | +|++++|||+|||+|++++|+|+++|+++++..|+++|++.. ..|.|++|. . +..+..+..
T Consensus 81 ~G-----i-~P~~v~GhSlGE~aA~~aaG~ls~e~a~~lv~~R~~~m~~~~--~~g~m~av~-~--~~~~~~~~~----- 144 (318)
T PF00698_consen 81 WG-----I-KPDAVIGHSLGEYAALVAAGALSLEDALRLVYERARLMDEAA--PPGAMLAVR-G--EEEEEKLAL----- 144 (318)
T ss_dssp TT-----H-CESEEEESTTHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHS--TSEEEEEEE-S--HHHHHHHHT-----
T ss_pred cc-----c-ccceeeccchhhHHHHHHCCccchhhhhhhHHHHHHHHHHhh--hcccccchh-h--hHHhhhccc-----
Confidence 99 8 999999999999999999999999999999999999999874 788999994 4 333333331
Q ss_pred CCCCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCCC
Q 023172 227 DEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCT 283 (286)
Q Consensus 227 ~~~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~~ 283 (286)
.++++|+++|+|+++||||+.++|+++.+.|++.++ ++++|+++ +|||||++.
T Consensus 145 --~~~v~ia~~Ns~~q~visG~~~~l~~~~~~l~~~~~-~~~~l~v~-~afHs~~m~ 197 (318)
T PF00698_consen 145 --PPDVEIANINSPRQVVISGEREALEALVERLKAEGI-KAKRLPVS-YAFHSPLME 197 (318)
T ss_dssp --TTTEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTS-EEEEESSS-SETTSGGGH
T ss_pred --cccceeeeeccccccccCCCHHHHHHHHHHhhccce-eEEEeeee-ccccCchhh
Confidence 568999999999999999999999999999999997 89999999 999999764
No 3
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=100.00 E-value=5.8e-43 Score=313.04 Aligned_cols=205 Identities=40% Similarity=0.662 Sum_probs=191.4
Q ss_pred CcEEEEecCCCCcccccchh-hhccHHHHHHHHHHHHHcCCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHHHHHHcc
Q 023172 70 PTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARD 148 (286)
Q Consensus 70 ~~~~fvF~Gqg~~~~~m~~~-~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~~l~~~g 148 (286)
.+++|+|||||+||.|||++ |..++.+++.+++.++.+++++.+.++.++++.+..+.++||++++++++.++.|++.|
T Consensus 2 ~~~A~~FpGQGsQ~~gMg~~l~~~~~~a~~~~~~a~~~l~~~l~~i~~~~p~~~L~~T~~tQPal~~~s~a~~~~l~~~~ 81 (310)
T COG0331 2 SKTAFVFPGQGSQSLGMGKDLYENSPEAKETFDEADEALGFDLWALVFEGPEEELNLTQNTQPALLLVSLAAYRVLAEQG 81 (310)
T ss_pred CcceEEeCCchHHHHHhHHHHHhccHHHHHHHHHHHHHhcccHHHHhcCCCHHHhcccchhhHHHHHHHHHHHHHHHHhc
Confidence 47899999999999999999 78899999999999999999999999988888899999999999999999999999866
Q ss_pred CCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhcccCCC
Q 023172 149 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDE 228 (286)
Q Consensus 149 ~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~~~~~~ 228 (286)
.+ + +|+.+.|||+|||+|++++|+++++|+++++..||.+|++.++.+.++|.+|.|++.++++++|++.+..
T Consensus 82 ~~---~-~p~~~aGHSlGEysAl~~ag~~~~ed~~~Lv~~RG~~M~~a~p~~~g~Maav~gl~~e~v~~~~~~~~~~--- 154 (310)
T COG0331 82 LG---V-KPDFVAGHSLGEYSALAAAGVLSFEDALKLVRKRGKLMQEAVPRGEGGMAAVLGLDDEQVEKACEEAAQG--- 154 (310)
T ss_pred CC---C-CCceeecccHhHHHHHHHcccccHHHHHHHHHHHHHHHHHHccCCCccHHHHcCCCHHHHHHHHHHhccC---
Confidence 32 4 8999999999999999999999999999999999999999988888999999999999999999987542
Q ss_pred CCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCCC
Q 023172 229 DNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCT 283 (286)
Q Consensus 229 ~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~~ 283 (286)
..|+|+++|+|.|+||||.+++++++.+.+++.+.++..+|+++ .|||||++.
T Consensus 155 -~~v~iaN~N~~~QiVIsG~~~ale~a~~~~~~~g~kr~i~l~vs-~pfHs~lm~ 207 (310)
T COG0331 155 -TVVEIANYNSPGQIVISGTKEALEKAAEILKEAGAKRAIPLPVS-GPFHSPLMK 207 (310)
T ss_pred -CeEEEeeeCCCCcEEEECCHHHHHHHHHHHHHhhhhhhcccCCC-chhhhhhhH
Confidence 26999999999999999999999999999999998778899999 999999764
No 4
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=100.00 E-value=1.6e-41 Score=304.28 Aligned_cols=201 Identities=42% Similarity=0.696 Sum_probs=182.8
Q ss_pred cEEEEecCCCCcccccchh-hhccHHHHHHHHHHHHHcCCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHHHHHHccC
Q 023172 71 TNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDG 149 (286)
Q Consensus 71 ~~~fvF~Gqg~~~~~m~~~-~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~~l~~~g~ 149 (286)
+++|+|||||+||++|+++ |..+|.||+.+++|++++|+++.+.+.+.+.+.+.++.+.|+++|++|++++++|+++|
T Consensus 2 ~~~~~f~Gqg~~~~~m~~~l~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~~~~~al~~~l~~~g- 80 (290)
T TIGR00128 2 KIAYVFPGQGSQTVGMGKDLYEQYPIAKELFDQASEALGYDLKKLCQEGPAEELNKTQYTQPALYVVSAILYLKLKEQG- 80 (290)
T ss_pred CEEEEECCCCcchhhhHHHHHHcCHHHHHHHHHHHHHhCcCHHHHHhCCCHHHhccccchhHHHHHHHHHHHHHHHHcC-
Confidence 6899999999999999999 67899999999999999999999998865555677889999999999999999999997
Q ss_pred CCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhcccCCCC
Q 023172 150 GQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDED 229 (286)
Q Consensus 150 ~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~~~~~~~ 229 (286)
+ | +|++++|||+|||+|++++|+++++|+++++..|+++|++......|.|++|.+.+.+++++.++..+ .
T Consensus 81 ~---i-~p~~v~GhS~GE~aAa~~aG~ls~eda~~lv~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~-----~ 151 (290)
T TIGR00128 81 G---L-KPDFAAGHSLGEYSALVAAGALDFETALKLVKKRGELMQEAVPEGGGAMAAVIGLDEEQLAQACEEAT-----E 151 (290)
T ss_pred C---C-CCCEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEeCCCHHHHHHHHHhcC-----C
Confidence 3 5 89999999999999999999999999999999999999987555678999988899999999998742 1
Q ss_pred CceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCC
Q 023172 230 NKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPC 282 (286)
Q Consensus 230 ~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~ 282 (286)
..+.|+++|+|+++||||+++.++++.+.+++.+..+.++|+++ .|||||++
T Consensus 152 ~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~-~~fHs~~l 203 (290)
T TIGR00128 152 NDVDLANFNSPGQVVISGTKDGVEAAAALFKEMGAKRAVPLEVS-GAFHSRFM 203 (290)
T ss_pred CcEEEEEECCCCCEEEECCHHHHHHHHHHHHHcCCCeEEEcCCC-CCcccHHH
Confidence 36999999999999999999999999999998887568899998 99999954
No 5
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=100.00 E-value=1.9e-40 Score=298.46 Aligned_cols=192 Identities=33% Similarity=0.428 Sum_probs=175.4
Q ss_pred EEEEecCCCCcccccchhhhccHHHHHHHHHHHHHcCCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHHHHHHccCCC
Q 023172 72 NAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQ 151 (286)
Q Consensus 72 ~~fvF~Gqg~~~~~m~~~~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~~l~~~g~~~ 151 (286)
++|+|||||+||++|++++..+|.|++.+++|++++++++.+. . +.+.+.++.++||++|++|++++++|+++|
T Consensus 1 ~~~~F~GqG~q~~~m~~~l~~~p~~~~~~~~~~~~l~~~~~~~-~--~~~~l~~~~~~qp~i~~~q~al~~~l~~~g--- 74 (295)
T TIGR03131 1 IALLFPGQGSQRAGMLAELPDHPAVAAVLAEASDVLGIDPREL-D--DAEALASTRSAQLCILAAGVAAWRALLALL--- 74 (295)
T ss_pred CEEEECCcchhhhhHHHHHHhCHHHHHHHHHHHHHhCcCHHHc-C--CHhhhccchhhhHHHHHHHHHHHHHHHhcC---
Confidence 5899999999999999998788999999999999999999873 2 234567889999999999999999999999
Q ss_pred CccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhcccCCCCCc
Q 023172 152 QIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNK 231 (286)
Q Consensus 152 ~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~~~~~~~~~ 231 (286)
+ +|+.++|||+||++|++++|+++++|+++++..|+++|+..+ ...++|++|.+++.+++++++.+. .
T Consensus 75 --~-~P~~v~GhS~GE~aAa~~aG~~s~e~a~~lv~~r~~~~~~~~-~~~~~m~av~~~~~~~~~~~l~~~--------~ 142 (295)
T TIGR03131 75 --P-RPSAVAGYSVGEYAAAVVAGVLTFDDALRLVALRAALMDQAV-PGGYGMLAVLGLDLAAVEALIAKH--------G 142 (295)
T ss_pred --C-CCcEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhc-CCCCCEEEEeCCCHHHHHHHHHHc--------C
Confidence 8 899999999999999999999999999999999999998764 345679888899999999999863 4
Q ss_pred eEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCC
Q 023172 232 VQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPC 282 (286)
Q Consensus 232 v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~ 282 (286)
++|+++|+|+++||||++++++++.+.+++.|+.++++|+++ .|||||++
T Consensus 143 v~ia~~Nsp~~~visG~~~~l~~l~~~l~~~g~~~~~~l~v~-~afHs~~~ 192 (295)
T TIGR03131 143 VYLAIINAPDQVVIAGSRAALRAVAELARAAGASRAKRLAVR-VPSHTPLL 192 (295)
T ss_pred EEEEEEcCCCCEEEECCHHHHHHHHHHHHhcCCceEEECCCC-CCcccHHH
Confidence 999999999999999999999999999999987689999999 99999865
No 6
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=100.00 E-value=2.9e-39 Score=290.85 Aligned_cols=190 Identities=28% Similarity=0.424 Sum_probs=175.0
Q ss_pred ecCCCCcccccchh-hhccHHHHHHHHHHHHHc----CCChHHHhhCCCC--CCCCCcccHhHHHHHHHHHHHHHHHHcc
Q 023172 76 FPGQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPK--EKLDSTIISQPAIYVTSLAAVELLRARD 148 (286)
Q Consensus 76 F~Gqg~~~~~m~~~-~~~~p~~~~~~~~~~~~l----g~~~~~~~~~~~~--~~~~~~~~~q~~i~a~~~al~~~l~~~g 148 (286)
|||||+||++|+++ |..+|.|++.+++|++++ |+++.+++.+.+. ..+.++..+||++|++|++++++|+++|
T Consensus 1 F~GQG~q~~~m~~~l~~~~~~~~~~~~~~~~~l~~~~g~~~~~~l~~~~~~~~~l~~~~~~q~~i~~~~~a~~~~l~~~G 80 (298)
T smart00827 1 FTGQGSQWPGMGRELYETEPVFRAALDECDAALQPLLGWSLLDVLFGEDGAASLLRRTEVAQPALFAVQVALARLWRSWG 80 (298)
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHHHHHHHHHHhcCCCHHHHHcCCCCchhhhcccchhHHHHHHHHHHHHHHHHHcC
Confidence 89999999999999 578999999999999986 9999999876442 3467888999999999999999999999
Q ss_pred CCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhcccCCC
Q 023172 149 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDE 228 (286)
Q Consensus 149 ~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~~~~~~ 228 (286)
| +|+.++|||+|||+|++++|+++++|+++++..|+++|++.. ..|.|++| +++.+++++.+.++
T Consensus 81 -----i-~p~~~~GhSlGE~aA~~~ag~~~~~~~l~l~~~r~~~~~~~~--~~g~m~av-~~~~~~~~~~l~~~------ 145 (298)
T smart00827 81 -----V-RPDAVVGHSLGEIAAAYVAGVLSLEDAARLVAARGRLMQALP--GGGAMLAV-GLSEEEVEELLAGY------ 145 (298)
T ss_pred -----C-cccEEEecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcC--CCCeEEEE-eCCHHHHHHHHHhc------
Confidence 8 899999999999999999999999999999999999999874 56899999 99999999999875
Q ss_pred CCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCC
Q 023172 229 DNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPC 282 (286)
Q Consensus 229 ~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~ 282 (286)
...++|+++|+|+++||||+++.++++.+.++..++ ++++|++. .|||||++
T Consensus 146 ~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~-~~~~L~v~-~~fHs~~~ 197 (298)
T smart00827 146 GGRVSVAAVNGPSSVVLSGDEDAVDELAAALEARGI-RARRLKVD-HAFHSPHM 197 (298)
T ss_pred CCcEEEEEEcCCCCEEEECCHHHHHHHHHHHHHCCc-eEEECCCC-CCCchHHH
Confidence 346999999999999999999999999999999998 89999998 99999864
No 7
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=100.00 E-value=2.3e-38 Score=341.74 Aligned_cols=262 Identities=22% Similarity=0.217 Sum_probs=206.6
Q ss_pred hcccCHHHHHHHHHHHHhHhhcCcc----chhhh-----hhcccccCccEEEeeccccchhcc-------c---------
Q 023172 6 SLAFSSSSLHNRYHKRTTFFNGSAA----SFNRI-----GVRRSLARSGVFMSVSVGKHTAVT-------V--------- 60 (286)
Q Consensus 6 ~~a~s~~~l~~~~~~~~~~l~~~~~----~~~~~-----~~~r~~~~~r~~~~~~~~~~~~~~-------~--------- 60 (286)
=.|+|..+|+..++.+.+++....+ .+.++ ...+.+++||..+++.+.+..... .
T Consensus 483 lSA~~~~aL~~~l~~~~~~l~~~~~~~~~~~~~la~~~t~~~~~~~~~R~a~va~~~~el~~~L~~a~~~l~~~~~~~~~ 562 (2582)
T TIGR02813 483 FTAANEKALVSSLKDWKNKLSAKADDQPYAFNALAVENTLRTIAVALARLGFVAKNADELITMLEQAITQLEAKSCEEWQ 562 (2582)
T ss_pred ecCCCHHHHHHHHHHHHHHHhcccccccccHHHHHHHhhhcccccCCceEEEEECCHHHHHHHHHHHHHhhhcccccccc
Confidence 3578999999999999888865433 23331 123456778966666554321110 0
Q ss_pred --ccc-cc----cCCCCcEEEEecCCCCcccccchh-hhccHHHHHHHHHHHHHcC----CChHHHhhCC----------
Q 023172 61 --DDA-LF----ADYKPTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDILG----FDLLEICTNG---------- 118 (286)
Q Consensus 61 --~~~-~~----~~~~~~~~fvF~Gqg~~~~~m~~~-~~~~p~~~~~~~~~~~~lg----~~~~~~~~~~---------- 118 (286)
.+. .. ....+|++|+|||||+||+|||++ |..+|.|++.+++|+++++ .++.+.++..
T Consensus 563 ~~~g~~~~~~~~~~~~~kvaflFpGQGSQy~gMgreL~~~~P~fr~~ld~~d~~l~~~~~~~L~~~l~p~~~~~~~~~~~ 642 (2582)
T TIGR02813 563 LPSGISYRKSALVVESGKVAALFAGQGSQYLNMGRELACNFPEVRQAAADMDSVFTQAGKGALSPVLYPIPVFNDESRKA 642 (2582)
T ss_pred ccccccccccccccCCCceEEEeCCCCchhHHHHHHHHhcCHHHHHHHHHHHHHhhhhcCCcHHHHhccccccccccccc
Confidence 000 00 013578999999999999999999 6889999999999999874 4566665421
Q ss_pred CCCCCCCcccHhHHHHHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhc
Q 023172 119 PKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAAD 198 (286)
Q Consensus 119 ~~~~~~~~~~~q~~i~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~ 198 (286)
....+.++.++||+||++|++++++|++|| | +|++++|||+|||+|+|++|+|+++|++++++.|+++|++...
T Consensus 643 ~~~~L~~t~~aQPaI~a~q~Al~~lL~~~G-----i-~Pd~v~GHSlGE~aAa~aAGvls~edal~Lv~~Rg~lm~~~~~ 716 (2582)
T TIGR02813 643 QEEALTNTQHAQSAIGTLSMGQYKLFTQAG-----F-KADMTAGHSFGELSALCAAGVISDDDYMMLAFSRGQAMAAPTG 716 (2582)
T ss_pred hhhhhccchhHHHHHHHHHHHHHHHHHHcC-----C-ccceeecCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhccc
Confidence 123467889999999999999999999999 8 8999999999999999999999999999999999999998643
Q ss_pred c-CCCcEEEEeCCC----HHHHHHHHHHhcccCCCCCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccC
Q 023172 199 A-AKGAMVSIIGLD----SDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFI 273 (286)
Q Consensus 199 ~-~~g~mlaV~~~~----~~~~~~~l~~~~~~~~~~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~ 273 (286)
. ..|.|++|. ++ .+.+++.+.. .++|+|+|+|||+++||||+.++|+++.+.|++.|+ ++++|+++
T Consensus 717 ~~~~G~M~AV~-l~~~~~~~~v~~~l~~-------~~~V~IA~~NsP~qvVISG~~~ai~~l~~~L~~~Gi-~a~~L~Vs 787 (2582)
T TIGR02813 717 EADIGFMYAVI-LAVVGSPTVIANCIKD-------FEGVSIANYNSPTQLVIAGVSTQIQIAAKALKEKGF-KAIPLPVS 787 (2582)
T ss_pred CCCCceeEEEE-ccccccHHHHHHHhcc-------CCCEEEEEEecCCCEEEECCHHHHHHHHHHHHhCCC-eEEECCCC
Confidence 2 468999984 43 4556666543 357999999999999999999999999999999998 89999999
Q ss_pred CCCCCCCCCC
Q 023172 274 CIPIQCHPCT 283 (286)
Q Consensus 274 ~~afHsp~~~ 283 (286)
+|||||++.
T Consensus 788 -~AFHSplm~ 796 (2582)
T TIGR02813 788 -GAFHTPLVA 796 (2582)
T ss_pred -CCcCcHHHH
Confidence 999999653
No 8
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=100.00 E-value=2.8e-36 Score=286.97 Aligned_cols=192 Identities=17% Similarity=0.117 Sum_probs=158.6
Q ss_pred CCcEEEEecCCCCcccccchh-hhccHHHHHHHHHHHHHcCCChHHHhhCC-----CCCCCCCcccHhHHHHH--HHHHH
Q 023172 69 KPTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNG-----PKEKLDSTIISQPAIYV--TSLAA 140 (286)
Q Consensus 69 ~~~~~fvF~Gqg~~~~~m~~~-~~~~p~~~~~~~~~~~~lg~~~~~~~~~~-----~~~~~~~~~~~q~~i~a--~~~al 140 (286)
.++++|+|||||+||+|||++ |..+|+|++.++++. ++.+.+..+ +........+.|+++|+ +++++
T Consensus 180 ~~~vaFvFpGqGsqy~gMGr~L~~~~P~fr~~ld~~~-----~L~~~L~~~~~~~~~~~~~~~~~l~q~alfav~~~~aL 254 (538)
T TIGR02816 180 KAGLAFVYPGVGTVYADMFNDFHQYFPALFAKLEREG-----DLKAMLQAEDIYGEDPKHAAEMSLGDLAIAGVGSSYLL 254 (538)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhhCHHHHHHHHhcC-----CHHHHhccccccccchhhhhhhhhHhHHHHHHHHHHHH
Confidence 578999999999999999999 789999999999974 555554321 12223455678899995 59999
Q ss_pred HHHH-HHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh-----------hcc------CCC
Q 023172 141 VELL-RARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEA-----------ADA------AKG 202 (286)
Q Consensus 141 ~~~l-~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~-----------~~~------~~g 202 (286)
+++| ++|| | +|++++|||+|||+|+|++|+|+++|++.++..|+++++.. |.. ..+
T Consensus 255 a~ll~~~~G-----I-~Pdav~GHSlGE~aAa~aAGvls~~dal~~v~~rs~L~~~~~rG~mmavr~a~~~~~~~~~~~~ 328 (538)
T TIGR02816 255 TQLLCDEFA-----I-KPDFALGYSKGEASMWASLGVWKNPHALIEKTQTDPIFTSAISGKLTAVREAWQLDDTAAEIQW 328 (538)
T ss_pred HHHHHHhcC-----C-CCCEEeecCHHHHHHHHHhCCCCcHHHHHHHHHhhHHhccccChhhhhhhhhhccccccccccc
Confidence 9999 5899 8 99999999999999999999999999999999998888642 100 123
Q ss_pred cEEEEeCCCHHHHHHHHHHhcccCCCCCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCC-----C
Q 023172 203 AMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIP-----I 277 (286)
Q Consensus 203 ~mlaV~~~~~~~~~~~l~~~~~~~~~~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~a-----f 277 (286)
.|++| +++.++++++|.. .++|+||++|+ +++||||+.++|+++.+.|+++|+ ++++|++. ++ |
T Consensus 329 ~~avV-~a~~~~V~~~L~~-------~~~V~IAaiN~-~q~VISG~~~Ai~~l~~~L~~~Gi-~~r~L~a~-HA~pam~~ 397 (538)
T TIGR02816 329 NSFVV-RCEAAPIEALLKD-------FPHAYLAIIQG-DTCVIAGCEAQCKALLAALGKRGI-AANRVTAM-HTQPALQE 397 (538)
T ss_pred cceee-cCCHHHHHHHhcc-------CCCeEEEEeCC-CCeEeeCCHHHHHHHHHHHHhCCe-eeeecccc-ccCccccc
Confidence 34455 8999999999975 34699999998 799999999999999999999998 89999887 76 7
Q ss_pred CCCCC
Q 023172 278 QCHPC 282 (286)
Q Consensus 278 Hsp~~ 282 (286)
||+.+
T Consensus 398 HS~~m 402 (538)
T TIGR02816 398 HQNVM 402 (538)
T ss_pred ccHHH
Confidence 88743
No 9
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.5e-34 Score=291.56 Aligned_cols=263 Identities=24% Similarity=0.308 Sum_probs=220.4
Q ss_pred chhcccCHHHHHHHHHHHHhHhhcCcc--chhh----hhhcccccCccEEEeeccccchhcccc----c-----cc--cc
Q 023172 4 TTSLAFSSSSLHNRYHKRTTFFNGSAA--SFNR----IGVRRSLARSGVFMSVSVGKHTAVTVD----D-----AL--FA 66 (286)
Q Consensus 4 ~~~~a~s~~~l~~~~~~~~~~l~~~~~--~~~~----~~~~r~~~~~r~~~~~~~~~~~~~~~~----~-----~~--~~ 66 (286)
+.-.|+|..+|+..+..+.+|+..... .+.| +..+|.++++|..+++.+.+.....+. . .. ..
T Consensus 442 l~lSAk~~~~L~~~a~~l~~~l~~~~~~~~l~dia~Tl~~gR~~~~~R~~~va~~~eel~~~L~~~~~~~~~~~~~~~~~ 521 (1061)
T COG3321 442 LVLSAKTAERLAATAPRLADRLELQGGLLSLADVAYTLQAGRPHFEHRLAVVANDREELEAGLRAFAAGKAKALSGVGAD 521 (1061)
T ss_pred eeeecCCHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHhhhhhccceeEEEeCCHHHHHHHHHHHhcCCCCccceeccc
Confidence 456789999999999999999987665 4555 888899999998888887655433111 0 01 11
Q ss_pred CCCCcEEEEecCCCCcccccchh-hhccHHHHHHHHHHHHHc----CCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHH
Q 023172 67 DYKPTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAV 141 (286)
Q Consensus 67 ~~~~~~~fvF~Gqg~~~~~m~~~-~~~~p~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~ 141 (286)
...++++|+|+|||+||.+||++ |...|.|++.++.|+..+ ++++.+.+..+....+......|+.+|++|++++
T Consensus 522 ~~~~~~vfvf~gqgsq~~~mg~el~~~~p~f~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~~Qp~lfai~~ala 601 (1061)
T COG3321 522 DSGKKTVFVFPGQGSQWAGMGRELYALEPVFASAFDALEALLHRLLGFSLPEVIFAPDYPFLESIDFAQPALFAVSVALA 601 (1061)
T ss_pred CCCCceEEEeCchHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHcCCcccceecCCCCccccCcchhhhHHHHHHHHHH
Confidence 11226999999999999999999 889999999999998753 7888777765432226667789999999999999
Q ss_pred HHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCH-HHHHHHHH
Q 023172 142 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDS-DKVQQLCD 220 (286)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~-~~~~~~l~ 220 (286)
++|++|| + +|+.++|||+||++|++++|++|++|+++++..|+++|+..+ ..|+|++| .++. +.+.+++.
T Consensus 602 ~l~~s~g-----v-~p~~viGhS~gE~aaA~~aGv~s~~d~~~~v~~Rg~lm~~~~--~~G~m~~v-~~~~~~~~~~~~~ 672 (1061)
T COG3321 602 ALWRSWG-----V-IPGAVIGHSLGELAAAVAAGVLSLEDALRVVATRGRLMQQLA--GEGAMLAV-ELSLLAEVQELLA 672 (1061)
T ss_pred HHHHhcC-----C-cCccccCcCHHHHHHHHHhccCChhhhhHhhhhcchhhccCC--CCcchhhh-hcCccchhhHHhh
Confidence 9999999 8 899999999999999999999999999999999999999963 44999999 6766 77777776
Q ss_pred HhcccCCCCCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCCC
Q 023172 221 AANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCT 283 (286)
Q Consensus 221 ~~~~~~~~~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~~ 283 (286)
.. ..++.|+.+|+|+++||+|+++++.+++..+..++. .+++++++ ++||||.+.
T Consensus 673 ~~------~~~v~ia~~n~P~~~vi~g~~~~i~~l~~~~~~~~~-~~~~~~v~-~a~hs~~m~ 727 (1061)
T COG3321 673 LG------RPQVPLAAVNSPQQVVIAGDPEAIAALIARLQAQGV-RARRLAVS-HAFHSPLMD 727 (1061)
T ss_pred cc------ccceeEEEecCCceEEecCCHHHHHHHHHHHhccCc-ccceeeee-eccccHHHH
Confidence 42 247999999999999999999999999999999997 89999999 999999553
No 10
>KOG2926 consensus Malonyl-CoA:ACP transacylase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=247.62 Aligned_cols=214 Identities=50% Similarity=0.716 Sum_probs=192.6
Q ss_pred CCCcEEEEecCCCCcccccchhhhccHHHHHHHHHHHHHcCCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHHHHHHc
Q 023172 68 YKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRAR 147 (286)
Q Consensus 68 ~~~~~~fvF~Gqg~~~~~m~~~~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~~l~~~ 147 (286)
..+-.+++|||||.||.||++.+..+|..++.+++|.+++|+++++++.+++.+.+..+.+.||+|++.++|..+.++..
T Consensus 60 ~~e~s~iLFPGQG~q~vgm~q~~l~~p~a~~~~~~A~~vl~YdLlki~~~gP~e~ldrT~~~QpAI~~~SlAa~E~l~~~ 139 (386)
T KOG2926|consen 60 PKETSVILFPGQGAQSVGMGQYLLQNPAARRLFAEASNVLGYDLLKICVNGPKEKLDRTVIAQPAIDVSSLAALEQLRLL 139 (386)
T ss_pred cccceEEEeCCCChhhhhhhHHHHhCcchhHHHHHHHHHhhHHHHHHHhcCccchhhcccccccceecccHHHHHhcccc
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhcccCC
Q 023172 148 DGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD 227 (286)
Q Consensus 148 g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~~~~~ 227 (286)
+..+ +++-.+..|||+|||+|++++|+|+++++++++..|+..|+...+.-.++|..+.+.+.+.+...+...+....
T Consensus 140 ~p~~--ie~~~~~aGfSlGEy~alvfa~aLsFs~alKlVk~Ra~AMs~a~~~~~~~m~~~~~~p~sk~~~~~~~a~~~~~ 217 (386)
T KOG2926|consen 140 GPSI--IENLVVTAGFSLGEYAALVFAGALSFSSALKLVKARAEAMSEASELVASGMVMILGLPTSKVQKACASANQLSA 217 (386)
T ss_pred Ccch--hheeeeeccccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccceeecCcHhHHHHHHhhhHHHhh
Confidence 7544 53467789999999999999999999999999999999999987778899999988898888888776553322
Q ss_pred C--CCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCCCC
Q 023172 228 E--DNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 284 (286)
Q Consensus 228 ~--~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~~~ 284 (286)
. .+.++||+||+|+++||+|..++|+-+.+..++.++++.++|.|+ .||||++|.+
T Consensus 218 ~qe~~~~~VANyl~~~~~VvsG~~~~Le~lee~~~sf~~~r~~~LaVs-gAFHTr~Mep 275 (386)
T KOG2926|consen 218 SQEYPVCEVANYLSPGQRVVSGLVKALESLEENAKSFKIRRMKRLAVS-GAFHTRLMEP 275 (386)
T ss_pred hccCCeeeeeccCCCCcEEeeCcHHHHHHHHHHHHhhhhhhheeeeec-cccchhhhhh
Confidence 1 367899999999999999999999999998889999999999999 9999997764
No 11
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=100.00 E-value=2.3e-33 Score=273.90 Aligned_cols=253 Identities=17% Similarity=0.199 Sum_probs=213.6
Q ss_pred cccCHHHHHHHHHHHHhHhhcCccchhh-----hhhcccccCccEEEeeccccchhcccccccccCCCCcEEEEecCCCC
Q 023172 7 LAFSSSSLHNRYHKRTTFFNGSAASFNR-----IGVRRSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGA 81 (286)
Q Consensus 7 ~a~s~~~l~~~~~~~~~~l~~~~~~~~~-----~~~~r~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~fvF~Gqg~ 81 (286)
.++|+.+...+.+....-- ++.++.. ...--..+|+|.+.+.+......++.+ .+...+++.|+|+|.|+
T Consensus 436 sgRT~eAVeqll~~~~~n~--~D~~~l~llndi~s~p~~~~pFRGY~vl~~e~~~~ev~~---~~~~eRPiwfiysGMGs 510 (2376)
T KOG1202|consen 436 SGRTPEAVEQLLEQALRNS--DDLELLSLLNDIASVPAPLHPFRGYAVLGGERGGPEVQQ---VPAGERPIWFIYSGMGS 510 (2376)
T ss_pred CCCCHHHHHHHHHHHhccc--chHHHHHHHHHHhcCCccCCcccceEEeccccCCcceee---cCCCCcceEEEEeCCcc
Confidence 3477777776665543221 1112222 333456689999888877633332222 23345789999999999
Q ss_pred cccccchhhhccHHHHHHHHHHHHHc---CCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHHHHHHccCCCCccCCcc
Q 023172 82 QAVGMGKEAQSVPAAAELYKKANDIL---GFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVD 158 (286)
Q Consensus 82 ~~~~m~~~~~~~p~~~~~~~~~~~~l---g~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~~l~~~g~~~~~i~~p~ 158 (286)
||++|+.++...+.|++.+.+|++.+ |+++.+.+...++..+.+..++-..|.++|+||.++|..+| | +||
T Consensus 511 QW~~Ma~~LMkl~~F~dsi~~~ae~l~~~gldv~~vL~~s~~~tfdn~l~sfvsitAiQiaLtDlLs~lg-----i-~PD 584 (2376)
T KOG1202|consen 511 QWAGMAKDLMKLERFRDSIQRSAEVLKPFGLDVIDVLTRSDESTFDNILNSFVSITAIQIALTDLLSCLG-----I-RPD 584 (2376)
T ss_pred hhhHHHHHHhhhHHHHHHHHHHHhhhcccCcchhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C-CCC
Confidence 99999999988999999999999986 89999999988888888888999999999999999999999 8 999
Q ss_pred EEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhcccCCCCCceEEEeee
Q 023172 159 VTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYL 238 (286)
Q Consensus 159 ~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~~~~~~~~~v~ia~~N 238 (286)
.++|||+||+.+.|+.|++|.|+++..+++||+.+.+. ..++|+|.+| |++.|++...+ .++++-+|+|
T Consensus 585 GIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~-~l~kGaMAAV-GLsWEq~~~~~---------P~~~~paCHN 653 (2376)
T KOG1202|consen 585 GIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDT-HLPKGAMAAV-GLSWEQCKSRC---------PPDVVPACHN 653 (2376)
T ss_pred cccccccchhcccccccccCHHHHHHHHHHcCceeccc-cCCCcchhhh-cCCHHHHhccC---------CCcccccccC
Confidence 99999999999999999999999999999999988877 5689999999 99999988765 5689999999
Q ss_pred CCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCC
Q 023172 239 CPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPC 282 (286)
Q Consensus 239 sp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~ 282 (286)
|.++|+|||+++.+.+++++|+++|+ +++.++...+|||||.+
T Consensus 654 s~D~~TiSGp~a~v~~~v~qL~~~gv-Fak~V~t~G~aFHS~~m 696 (2376)
T KOG1202|consen 654 SKDNVTISGPQASVFAFVEQLRAEGV-FAKEVRTGGYAFHSPYM 696 (2376)
T ss_pred CCCceEecCChHHHHHHHHHhhhcCe-eeeEecCCCccccCHHH
Confidence 99999999999999999999999999 99999998899999844
No 12
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=92.36 E-value=0.92 Score=37.19 Aligned_cols=47 Identities=26% Similarity=0.359 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHH
Q 023172 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (286)
Q Consensus 134 ~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (286)
.+.++...+.|.+.| + +|+.+.|-|.|-+.|++.+...+.++...+.
T Consensus 10 G~~~~Gvl~aL~e~g-----i-~~d~v~GtSaGAi~aa~~a~g~~~~~~~~~~ 56 (172)
T cd07198 10 GIYHVGVAKALRERG-----P-LIDIIAGTSAGAIVAALLASGRDLEEALLLL 56 (172)
T ss_pred HHHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 457888999999999 8 7999999999999999999888988877765
No 13
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=90.08 E-value=1.1 Score=36.78 Aligned_cols=95 Identities=20% Similarity=0.217 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhh--ccCCCcEEEEeCCCH
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAA--DAAKGAMVSIIGLDS 212 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~--~~~~g~mlaV~~~~~ 212 (286)
+.+....+.|.+.| + +||.++|-|.|.+.|+..+-..+.++..+.......-+.... ...... -.+.
T Consensus 13 ~~~~Gvl~~L~~~~-----~-~~d~i~GtSaGal~a~~~a~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 81 (175)
T cd07205 13 LAHIGVLKALEEAG-----I-PIDIVSGTSAGAIVGALYAAGYSPEEIEERAKLRSTDLKALSDLTIPTAG-----LLRG 81 (175)
T ss_pred HHHHHHHHHHHHcC-----C-CeeEEEEECHHHHHHHHHHcCCCHHHHHHHHHhhccchhhhhcccccccc-----ccCh
Confidence 45788888898888 7 899999999999999998877888887766542221111110 001111 1355
Q ss_pred HHHHHHHHHhcccC---CCCCceEEEeeeCC
Q 023172 213 DKVQQLCDAANQEV---DEDNKVQIANYLCP 240 (286)
Q Consensus 213 ~~~~~~l~~~~~~~---~~~~~v~ia~~Nsp 240 (286)
+.+++.+++..... +...++.|.+.|-.
T Consensus 82 ~~l~~~l~~~~~~~~~~~~~~~l~i~a~~l~ 112 (175)
T cd07205 82 DKFLELLDEYFGDRDIEDLWIPFFIVATDLT 112 (175)
T ss_pred HHHHHHHHHHcCCCcHHHCCCCEEEEEEECC
Confidence 66777766543211 11345777777644
No 14
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=89.92 E-value=1.1 Score=37.24 Aligned_cols=47 Identities=26% Similarity=0.278 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHH
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (286)
+.++...+.|++.| + +|+.+.|-|.|-+.|+..+-..+.++..++..
T Consensus 12 ~~~~Gvl~~L~e~~-----~-~~d~i~GtSaGai~aa~~a~g~~~~~~~~~~~ 58 (194)
T cd07207 12 IAYIGALKALEEAG-----I-LKKRVAGTSAGAITAALLALGYSAADIKDILK 58 (194)
T ss_pred HHHHHHHHHHHHcC-----C-CcceEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 45577888888888 7 89999999999998888887788877666544
No 15
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=88.86 E-value=1.2 Score=37.98 Aligned_cols=39 Identities=21% Similarity=0.253 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCC
Q 023172 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFS 178 (286)
Q Consensus 134 ~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls 178 (286)
.+.++...+.|.+.| + ++|.+.|-|.|-+.|+..+...+
T Consensus 10 G~~~~Gvl~aL~e~g-----~-~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 10 GAYQAGVLKALAEAG-----I-EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHcCCc
Confidence 467888999999999 7 89999999999999998887776
No 16
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=88.55 E-value=1.6 Score=37.55 Aligned_cols=114 Identities=14% Similarity=0.018 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhcc-CCCcEEEEeCCCH
Q 023172 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADA-AKGAMVSIIGLDS 212 (286)
Q Consensus 134 ~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~-~~g~mlaV~~~~~ 212 (286)
.+.++...+.|.+.| + +|+.+.|-|.|-+.|+..+-..+.++......... ....+.. ....-.. -.+.
T Consensus 12 G~~~~GvL~aL~e~g-----i-~~~~i~GtSaGAi~aa~~a~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g--~~~~ 81 (221)
T cd07210 12 FYAHLGFLAALLEMG-----L-EPSAISGTSAGALVGGLFASGISPDEMAELLLSLE--RKDFWMFWDPPLRGG--LLSG 81 (221)
T ss_pred HHHHHHHHHHHHHcC-----C-CceEEEEeCHHHHHHHHHHcCCCHHHHHHHHHhcC--HHHHhhhccccCCcc--ccCh
Confidence 467888889999998 7 89999999999999998887788888766543211 1111000 0000011 1356
Q ss_pred HHHHHHHHHhcccC---CCCCceEEEeeeCC-CCEEEEcCHHHHHHHHH
Q 023172 213 DKVQQLCDAANQEV---DEDNKVQIANYLCP-GNYAVSGGVKGIEAVEA 257 (286)
Q Consensus 213 ~~~~~~l~~~~~~~---~~~~~v~ia~~Nsp-~~~vvsG~~~~l~~l~~ 257 (286)
+.+++.+++..... +....+.|.+.|-. ...++-...+-.+.+.+
T Consensus 82 ~~l~~~l~~~l~~~~~~~~~~~l~i~atdl~tg~~~~f~~~~l~~av~A 130 (221)
T cd07210 82 DRFAALLREHLPPDRFEELRIPLAVSVVDLTSRETLLLSEGDLAEAVAA 130 (221)
T ss_pred HHHHHHHHHHcCCCCHHHCCCCeEEEEEECCCCCEEEECCCCHHHHHHH
Confidence 77777777653221 11335677776632 23334333333444433
No 17
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=88.54 E-value=1.4 Score=39.80 Aligned_cols=45 Identities=20% Similarity=0.290 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHH
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKL 185 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l 185 (286)
+.++...+.|.+.| | .|+.+.|-|+|.+.+++.|...+.++--..
T Consensus 24 ~~hiGVl~aL~e~g-----i-~~~~iaGtS~GAiva~l~A~g~~~~~~~~~ 68 (306)
T COG1752 24 AAHIGVLKALEEAG-----I-PIDVIAGTSAGAIVAALYAAGMDEDELELA 68 (306)
T ss_pred HHHHHHHHHHHHcC-----C-CccEEEecCHHHHHHHHHHcCCChhHHHHH
Confidence 55778889999999 8 899999999999999988877776654333
No 18
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=88.00 E-value=14 Score=34.55 Aligned_cols=55 Identities=16% Similarity=0.067 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHH
Q 023172 132 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 188 (286)
Q Consensus 132 ~i~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~ 188 (286)
.+....++.++.|.+.|..+ +..++.+.|-|.|.++|++.+...+.+++...+..
T Consensus 19 flG~yHvGV~~~L~e~~p~l--l~~~~~iaGaSAGAL~aa~~a~g~~~~~~~~~i~~ 73 (405)
T cd07223 19 YLGLYHVGVTECLRQRAPRL--LQGARRIYGSSSGALNAVSIVCGKSADFCCSNLLG 73 (405)
T ss_pred HHHHHHHHHHHHHHHhCchh--hccCCeeeeeCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 45677888899998887332 43577899999999999999999999976666554
No 19
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=87.49 E-value=1.9 Score=38.36 Aligned_cols=44 Identities=16% Similarity=0.308 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHH
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLK 184 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~ 184 (286)
+..+...+.|++.| | .+|.+.|-|+|.+.++..+-.++..+...
T Consensus 23 ~ahiGVL~aLeE~g-----i-~~d~v~GtSaGAiiga~ya~g~~~~~~~~ 66 (269)
T cd07227 23 ISHIGILQALEEAG-----I-PIDAIGGTSIGSFVGGLYAREADLVPIFG 66 (269)
T ss_pred HHHHHHHHHHHHcC-----C-CccEEEEECHHHHHHHHHHcCCchHHHHH
Confidence 45677889999999 8 79999999999988877766667666443
No 20
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=86.99 E-value=2.1 Score=38.78 Aligned_cols=46 Identities=17% Similarity=0.302 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHH
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (286)
+..+...+.|.+.| | .||.++|-|+|-+.++..+.-.+.++...+.
T Consensus 28 ~ahiGvL~aLee~g-----i-~~d~v~GtSaGAi~ga~ya~g~~~~~~~~~~ 73 (306)
T cd07225 28 CAHIGVIKALEEAG-----I-PVDMVGGTSIGAFIGALYAEERNISRMKQRA 73 (306)
T ss_pred HHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 45677788999999 8 8999999999988777766667766655443
No 21
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=86.17 E-value=2.4 Score=34.82 Aligned_cols=44 Identities=16% Similarity=0.206 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHH
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLK 184 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~ 184 (286)
+.++...+.|++.| + .||.+.|-|.|-+.|+..+...+.++...
T Consensus 13 ~~~~Gvl~~L~e~g-----~-~~d~i~GtSaGAi~aa~~a~g~~~~~~~~ 56 (175)
T cd07228 13 WAHIGVLRALEEEG-----I-EIDIIAGSSIGALVGALYAAGHLDALEEW 56 (175)
T ss_pred HHHHHHHHHHHHCC-----C-CeeEEEEeCHHHHHHHHHHcCCCHHHHHH
Confidence 45778888999998 7 79999999999998888776666655433
No 22
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=84.86 E-value=3 Score=39.16 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHH
Q 023172 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (286)
Q Consensus 133 i~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (286)
.-...++..+.|.+.| + .|+.+.|-|.|.+.|+.++. -+.+|..++..
T Consensus 94 ~G~~h~Gv~kaL~e~g-----l-~p~~i~GtS~Gaivaa~~a~-~~~~e~~~~l~ 141 (391)
T cd07229 94 FGLCHLGVVKALWLRG-----L-LPRIITGTATGALIAALVGV-HTDEELLRFLD 141 (391)
T ss_pred HHHHHHHHHHHHHHcC-----C-CCceEEEecHHHHHHHHHHc-CCHHHHHHHHh
Confidence 3456788899999999 8 89999999999999999888 57788777764
No 23
>PRK10279 hypothetical protein; Provisional
Probab=83.20 E-value=2 Score=38.85 Aligned_cols=36 Identities=19% Similarity=0.383 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHH-Hhcc
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALA-FAGA 176 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~-~aG~ 176 (286)
+.++...+.|.+.| | +|+.++|-|+|-+.++. ++|.
T Consensus 18 ~ahiGVL~aL~E~g-----i-~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 18 WSHIGVINALKKVG-----I-EIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHHHHcC-----C-CcCEEEEEcHHHHHHHHHHcCC
Confidence 45788889999999 8 89999999999877654 5564
No 24
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=82.51 E-value=7 Score=33.86 Aligned_cols=51 Identities=22% Similarity=0.255 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCC--ccEEEeccHHHHHHHHHhccCCHHHHHHHHHH
Q 023172 132 AIYVTSLAAVELLRARDGGQQIIDS--VDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 188 (286)
Q Consensus 132 ~i~a~~~al~~~l~~~g~~~~~i~~--p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~ 188 (286)
.++...+...+.|.+.| | . .+.+.|-|.|-++|+..+-..+.++..++...
T Consensus 9 ~lg~yh~GVl~~L~e~g-----i-~~~~~~i~G~SAGAl~aa~~asg~~~~~~~~~~~~ 61 (233)
T cd07224 9 LLFPYHLGVLSLLIEAG-----V-INETTPLAGASAGSLAAACSASGLSPEEALEATEE 61 (233)
T ss_pred HHHHHHHHHHHHHHHcC-----C-CCCCCEEEEEcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 35677888999999998 6 4 56899999999999988877888877776544
No 25
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=80.94 E-value=37 Score=29.63 Aligned_cols=50 Identities=10% Similarity=0.094 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHH
Q 023172 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (286)
Q Consensus 133 i~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (286)
.....+...+.|++.|.. + .++.+.|-|.|-++|++.+-.++.++..+..
T Consensus 11 rG~yh~GVl~aL~e~g~~---~-~~d~i~GtSAGAl~aa~~a~g~~~~~~~~~~ 60 (245)
T cd07218 11 LGIYHVGVAVCLKKYAPH---L-LLNKISGASAGALAACCLLCDLPLGEMTSDF 60 (245)
T ss_pred HHHHHHHHHHHHHHhCcc---c-CCCeEEEEcHHHHHHHHHHhCCcHHHHHHHH
Confidence 345678888999998821 1 4788999999999999988778877766443
No 26
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=80.42 E-value=38 Score=29.43 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHccCCCCccCC----ccEEEeccHHHHHHHHHhccCCHHHHHHHHH
Q 023172 134 YVTSLAAVELLRARDGGQQIIDS----VDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (286)
Q Consensus 134 ~a~~~al~~~l~~~g~~~~~i~~----p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (286)
....+...+.|.+.| + + ++.++|-|.|-+.|++.+-..+.++......
T Consensus 11 G~yh~GVl~~L~e~g-----~-~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~~~~~~~ 62 (243)
T cd07204 11 GIYHVGVASALREHA-----P-RLLQNARRIAGASAGAIVAAVVLCGVSMEEACSFIL 62 (243)
T ss_pred HHHHHHHHHHHHHcC-----c-ccccCCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 456788899999988 4 3 4699999999999998877788877655543
No 27
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=79.23 E-value=6.7 Score=35.40 Aligned_cols=35 Identities=26% Similarity=0.263 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 134 ~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
-+..++..+.|.+.| + .|+.+.|-|.|.+.|+..+
T Consensus 81 g~~h~Gvl~aL~e~~-----l-~~~~i~GtSaGAi~aa~~~ 115 (298)
T cd07206 81 GLFHLGVVKALWEQD-----L-LPRVISGSSAGAIVAALLG 115 (298)
T ss_pred HHHHHHHHHHHHHcC-----C-CCCEEEEEcHHHHHHHHHH
Confidence 456788889999988 7 8999999999998887765
No 28
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=79.15 E-value=7.4 Score=35.46 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHH
Q 023172 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (286)
Q Consensus 133 i~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (286)
.-+..++..+.|.+.| + .|+.+.|-|.|.+.|+..+. -+.+|..++.
T Consensus 79 ~g~~h~GVlkaL~e~g-----l-~p~~i~GsSaGAivaa~~~~-~t~~El~~~~ 125 (323)
T cd07231 79 LGTFHVGVVRTLVEHQ-----L-LPRVIAGSSVGSIVCAIIAT-RTDEELQSFF 125 (323)
T ss_pred HHHHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 3466788899999999 7 89999999999988888765 5777766665
No 29
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=77.08 E-value=10 Score=35.48 Aligned_cols=54 Identities=17% Similarity=0.230 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHH
Q 023172 132 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (286)
Q Consensus 132 ~i~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (286)
...+.+++.++.|++.+.++ |..++.++|-|.|-++|+..+-..+.++..++..
T Consensus 22 frGiYHvGVl~aL~E~gp~l--l~~~d~IaGtSAGALvAAl~asG~s~de~~r~~~ 75 (382)
T cd07219 22 FLSFYQAGVVDALRDLAPRM--LETAHRVAGTSAGSVIAALVVCGISMDEYLRVLN 75 (382)
T ss_pred HHHHHHHHHHHHHHhcCCcc--cccCCeEEEEcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 44567889999999887332 3247899999999999988877788888877764
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=76.53 E-value=3.3 Score=35.14 Aligned_cols=32 Identities=25% Similarity=0.188 Sum_probs=25.1
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccC
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAF 177 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~l 177 (286)
+.++++..+ + ++-.++|||+|-..|..++...
T Consensus 56 l~~~l~~~~-----~-~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 56 LSQTLQSYN-----I-LPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred HHHHHHHcC-----C-CCeEEEEECHHHHHHHHHHHhC
Confidence 446677777 6 7889999999998888876554
No 31
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=76.12 E-value=16 Score=32.01 Aligned_cols=54 Identities=17% Similarity=0.067 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHH
Q 023172 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 188 (286)
Q Consensus 133 i~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~ 188 (286)
..+..+...+.|.+.|... ++.++.+.|-|.|.++|++.+-..+.++....+..
T Consensus 15 rG~yh~GVl~~L~e~g~~l--~~~~~~i~G~SAGAl~aa~~a~g~~~~~~~~~~~~ 68 (249)
T cd07220 15 LGVYHVGVASCLLEHAPFL--VANARKIYGASAGALTATALVTGVCLGECGASVIR 68 (249)
T ss_pred HHHHHHHHHHHHHhcCCcc--cccCCeEEEEcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4566788889999888111 21279999999999999987766677665554443
No 32
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=76.08 E-value=53 Score=28.63 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 134 ~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
....+...+.|++.|.. ++++++.+.|-|.|-+.|++.+.
T Consensus 11 G~yhiGVl~~L~e~g~~--l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 11 GIYHLGAAKALLRHGKK--LLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHHHHHHcCch--hhccCCEEEEECHHHHHHHHHhc
Confidence 45678888999998811 01137999999999999998874
No 33
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=75.76 E-value=12 Score=32.94 Aligned_cols=53 Identities=13% Similarity=0.196 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHH
Q 023172 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 188 (286)
Q Consensus 134 ~a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~ 188 (286)
....++..+.|++.+... +..++.++|-|.|.++|+..+-..+.++..++...
T Consensus 12 G~yh~GVl~aL~e~~~~l--~~~~~~i~GtSAGAl~aa~~asg~~~~~~~~~~~~ 64 (252)
T cd07221 12 GFYHVGVTRCLSERAPHL--LRDARMFFGASAGALHCVTFLSGLPLDQILQILMD 64 (252)
T ss_pred HHHHHHHHHHHHHhCcch--hccCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 346888889999887111 21389999999999999888777777777766543
No 34
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=75.06 E-value=8.4 Score=36.58 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHH
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (286)
+..++..+.|.+.| + .|+.+.|-|.|.+.|+..+. -+.++..++.
T Consensus 86 ~~hiGVLkaL~E~g-----l-~p~vIsGTSaGAivAal~as-~~~eel~~~l 130 (421)
T cd07230 86 MFHIGVLKALFEAN-----L-LPRIISGSSAGSIVAAILCT-HTDEEIPELL 130 (421)
T ss_pred HHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 45778889998988 7 89999999999988877665 5666654443
No 35
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=73.32 E-value=9.8 Score=35.96 Aligned_cols=46 Identities=22% Similarity=0.168 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHH
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (286)
...++..+.|.+.| + .|+.+.|-|.|.+.|+..+- -+.++..++..
T Consensus 80 ~~h~GVlkaL~e~g-----l-lp~iI~GtSAGAivaalla~-~t~~el~~~~~ 125 (407)
T cd07232 80 YYHFGVVKALLDAD-----L-LPNVISGTSGGSLVAALLCT-RTDEELKQLLV 125 (407)
T ss_pred HHHHHHHHHHHhCC-----C-CCCEEEEECHHHHHHHHHHc-CCHHHHHHHHh
Confidence 45678889999998 7 89999999999988888775 56666655543
No 36
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=73.08 E-value=6.1 Score=34.72 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHccCCCCccCC-ccEEEeccHHHHHHHH-HhccC
Q 023172 135 VTSLAAVELLRARDGGQQIIDS-VDVTCGLSLGEYTALA-FAGAF 177 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~-p~~v~GhS~GE~aAa~-~aG~l 177 (286)
+.+....+.|.+.| + . ++.++|-|.|-+.|+. ++|.-
T Consensus 11 ~~~~Gvl~al~e~~-----~-~~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 11 AYTAGVLDAFLEAG-----I-RPFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHHHHHcC-----C-CCCCEEEEECHHHHhHHHHHhCCc
Confidence 46778889999998 7 6 9999999999888776 45543
No 37
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=68.46 E-value=20 Score=32.52 Aligned_cols=75 Identities=16% Similarity=0.142 Sum_probs=46.3
Q ss_pred HHHHHHHHHH-ccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHH
Q 023172 137 SLAAVELLRA-RDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKV 215 (286)
Q Consensus 137 ~~al~~~l~~-~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~ 215 (286)
.+.+.+.+++ .|. .+.+.+|.+.|-|.|-+.|+..+-.++.+|...+....+ .+..... . ..+.+.+
T Consensus 14 ~i~vL~~le~~~g~--~i~~~fD~i~GTStGgiIA~~la~g~s~~e~~~~y~~~~---~~iF~~~------~-~y~~~~l 81 (312)
T cd07212 14 LIQMLIAIEKALGR--PIRELFDWIAGTSTGGILALALLHGKSLREARRLYLRMK---DRVFDGS------R-PYNSEPL 81 (312)
T ss_pred HHHHHHHHHHHhCC--CchhhccEEEeeChHHHHHHHHHcCCCHHHHHHHHHHhh---hhhCCCC------C-CCCChHH
Confidence 3444456665 361 111137999999999999988888899999888754332 2221111 1 2456667
Q ss_pred HHHHHHhc
Q 023172 216 QQLCDAAN 223 (286)
Q Consensus 216 ~~~l~~~~ 223 (286)
+++|++..
T Consensus 82 e~~L~~~~ 89 (312)
T cd07212 82 EEFLKREF 89 (312)
T ss_pred HHHHHHHH
Confidence 77777654
No 38
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=68.31 E-value=5.7 Score=34.15 Aligned_cols=30 Identities=33% Similarity=0.240 Sum_probs=22.5
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
+.++++..+ + +|..++|||+|-..++.++.
T Consensus 85 l~~~i~~~~-----~-~~~~lvG~S~Gg~~a~~~a~ 114 (278)
T TIGR03056 85 LSALCAAEG-----L-SPDGVIGHSAGAAIALRLAL 114 (278)
T ss_pred HHHHHHHcC-----C-CCceEEEECccHHHHHHHHH
Confidence 334566677 6 78899999999888777653
No 39
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=67.43 E-value=7.1 Score=34.41 Aligned_cols=30 Identities=13% Similarity=-0.051 Sum_probs=23.0
Q ss_pred HHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 139 AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 139 al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
.+..++.+++ + ++-.++|||+|-..|+..+
T Consensus 91 ~l~~~l~~l~-----~-~~~~lvGhS~Gg~va~~~a 120 (294)
T PLN02824 91 QLNDFCSDVV-----G-DPAFVICNSVGGVVGLQAA 120 (294)
T ss_pred HHHHHHHHhc-----C-CCeEEEEeCHHHHHHHHHH
Confidence 4556667777 6 7888999999988887654
No 40
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=66.94 E-value=7.4 Score=33.98 Aligned_cols=28 Identities=29% Similarity=0.247 Sum_probs=22.0
Q ss_pred HHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 142 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
+++..++ + ++-.++|||+|-+.|+.++.
T Consensus 83 ~~i~~l~-----~-~~~~LvG~S~GG~va~~~a~ 110 (276)
T TIGR02240 83 RMLDYLD-----Y-GQVNAIGVSWGGALAQQFAH 110 (276)
T ss_pred HHHHHhC-----c-CceEEEEECHHHHHHHHHHH
Confidence 4566666 6 68889999999988887763
No 41
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=65.04 E-value=8.4 Score=35.09 Aligned_cols=30 Identities=33% Similarity=0.414 Sum_probs=21.8
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
+..++..+| ++++-.++|||+|-+.|...+
T Consensus 127 l~~ll~~l~-----l~~~~~lvG~SmGG~vA~~~A 156 (343)
T PRK08775 127 IALLLDALG-----IARLHAFVGYSYGALVGLQFA 156 (343)
T ss_pred HHHHHHHcC-----CCcceEEEEECHHHHHHHHHH
Confidence 346777787 623347999999988887664
No 42
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=64.67 E-value=22 Score=29.91 Aligned_cols=90 Identities=18% Similarity=0.089 Sum_probs=48.5
Q ss_pred cEEEEecCCCCcccccchhhhccHHHHHHHHHH-HHHcCCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHHHHHHccC
Q 023172 71 TNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKA-NDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDG 149 (286)
Q Consensus 71 ~~~fvF~Gqg~~~~~m~~~~~~~p~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~~l~~~g~ 149 (286)
.++++|+|.|. |.++.+.+ .+.+... -.++|+|...++.... ++.. .---++-.+-...+.|+
T Consensus 3 t~~v~~SGDgG-w~~~d~~~------a~~l~~~G~~VvGvdsl~Yfw~~r-----tP~~---~a~Dl~~~i~~y~~~w~- 66 (192)
T PF06057_consen 3 TLAVFFSGDGG-WRDLDKQI------AEALAKQGVPVVGVDSLRYFWSER-----TPEQ---TAADLARIIRHYRARWG- 66 (192)
T ss_pred EEEEEEeCCCC-chhhhHHH------HHHHHHCCCeEEEechHHHHhhhC-----CHHH---HHHHHHHHHHHHHHHhC-
Confidence 47899999998 33443331 1222211 1235787777665321 1111 11112233445567888
Q ss_pred CCCccCCccEEEeccHHHHHHHHHhccCCHHH
Q 023172 150 GQQIIDSVDVTCGLSLGEYTALAFAGAFSFED 181 (286)
Q Consensus 150 ~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~d 181 (286)
. +--+++|||+|.=...++-..|+...
T Consensus 67 ----~-~~vvLiGYSFGADvlP~~~nrLp~~~ 93 (192)
T PF06057_consen 67 ----R-KRVVLIGYSFGADVLPFIYNRLPAAL 93 (192)
T ss_pred ----C-ceEEEEeecCCchhHHHHHhhCCHHH
Confidence 4 55678999999755555555555443
No 43
>PRK00870 haloalkane dehalogenase; Provisional
Probab=64.53 E-value=8.6 Score=34.10 Aligned_cols=29 Identities=14% Similarity=0.099 Sum_probs=21.8
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
+.+++.+++ + ++-.++|||+|-+.|...+
T Consensus 105 l~~~l~~l~-----~-~~v~lvGhS~Gg~ia~~~a 133 (302)
T PRK00870 105 MRSWFEQLD-----L-TDVTLVCQDWGGLIGLRLA 133 (302)
T ss_pred HHHHHHHcC-----C-CCEEEEEEChHHHHHHHHH
Confidence 445667777 6 6778999999987777654
No 44
>PF03958 Secretin_N: Bacterial type II/III secretion system short domain; InterPro: IPR005644 This is a group of NolW-like proteins, which are closely related to bacterial type II and III secretion system protein (IPR004846 from INTERPRO).; PDB: 3EZJ_C 2Y3M_A 3OSS_D.
Probab=64.43 E-value=28 Score=24.29 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=28.4
Q ss_pred CceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhc
Q 023172 230 NKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSF 262 (286)
Q Consensus 230 ~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~ 262 (286)
..+.|.....-+.++|.|+++.++.+.+.+++.
T Consensus 44 ~~~~i~~d~~tNsliv~g~~~~~~~i~~li~~L 76 (82)
T PF03958_consen 44 SSGRIVADERTNSLIVRGTPEDLEQIRELIKQL 76 (82)
T ss_dssp TTTEEEEECTTTEEEEEEEHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCEEEEEeCHHHHHHHHHHHHHH
Confidence 467899999999999999999999888877754
No 45
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=63.43 E-value=11 Score=30.58 Aligned_cols=30 Identities=37% Similarity=0.406 Sum_probs=22.8
Q ss_pred HHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 139 AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 139 al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
.+.++++..+ . ++-.++|||+|-..++.++
T Consensus 55 ~l~~~l~~~~-----~-~~~~lvG~S~Gg~~a~~~a 84 (228)
T PF12697_consen 55 DLAELLDALG-----I-KKVILVGHSMGGMIALRLA 84 (228)
T ss_dssp HHHHHHHHTT-----T-SSEEEEEETHHHHHHHHHH
T ss_pred hhhhcccccc-----c-ccccccccccccccccccc
Confidence 3445677777 5 6888999999988777664
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=62.98 E-value=10 Score=35.56 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=22.4
Q ss_pred HHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHH
Q 023172 138 LAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAF 173 (286)
Q Consensus 138 ~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~ 173 (286)
-.+.++++++| |++..+++|||+|-..|+..
T Consensus 148 ~~~~~ll~~lg-----i~~~~~vvG~SmGG~ial~~ 178 (389)
T PRK06765 148 RVQKELIKSLG-----IARLHAVMGPSMGGMQAQEW 178 (389)
T ss_pred HHHHHHHHHcC-----CCCceEEEEECHHHHHHHHH
Confidence 44556677888 74556799999997777654
No 47
>PRK11071 esterase YqiA; Provisional
Probab=62.41 E-value=11 Score=31.36 Aligned_cols=32 Identities=25% Similarity=0.172 Sum_probs=24.0
Q ss_pred HHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCC
Q 023172 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFS 178 (286)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls 178 (286)
.+++...+ + ++-.++|||+|-+.|+..+....
T Consensus 52 ~~l~~~~~-----~-~~~~lvG~S~Gg~~a~~~a~~~~ 83 (190)
T PRK11071 52 ESLVLEHG-----G-DPLGLVGSSLGGYYATWLSQCFM 83 (190)
T ss_pred HHHHHHcC-----C-CCeEEEEECHHHHHHHHHHHHcC
Confidence 34555666 5 67899999999999998875543
No 48
>PRK03592 haloalkane dehalogenase; Provisional
Probab=61.79 E-value=11 Score=33.32 Aligned_cols=29 Identities=17% Similarity=0.149 Sum_probs=23.0
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
+..+++.++ + ++-.++|||+|-+.|+..+
T Consensus 83 l~~ll~~l~-----~-~~~~lvGhS~Gg~ia~~~a 111 (295)
T PRK03592 83 LDAWFDALG-----L-DDVVLVGHDWGSALGFDWA 111 (295)
T ss_pred HHHHHHHhC-----C-CCeEEEEECHHHHHHHHHH
Confidence 445667777 6 7889999999988887664
No 49
>COG1054 Predicted sulfurtransferase [General function prediction only]
Probab=60.68 E-value=28 Score=31.33 Aligned_cols=50 Identities=20% Similarity=0.175 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHhcccCCCCCceEEEe--eeCCCCEEEEcCHHHHHHHHHHHHhcC
Q 023172 210 LDSDKVQQLCDAANQEVDEDNKVQIAN--YLCPGNYAVSGGVKGIEAVEAKAKSFK 263 (286)
Q Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~v~ia~--~Nsp~~~vvsG~~~~l~~l~~~l~~~~ 263 (286)
-+++.+++.+.++...++-.++|.||. +|+ +|||+.++++++.+.|....
T Consensus 17 ~dp~~~~~~l~~~~~~~~vkGrillA~EGINg----tvsG~~e~~~~~~~~l~a~~ 68 (308)
T COG1054 17 EDPEALRDPLLALCKALGVKGRILLAHEGING----TVSGSAEAIEAYMAWLRADP 68 (308)
T ss_pred CCHHHHHHHHHHHHHHcCceeEEEEccCCcce----eEecCHHHHHHHHHHHHhCc
Confidence 356666776666665555567888887 565 79999999999999999864
No 50
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=59.76 E-value=27 Score=31.13 Aligned_cols=53 Identities=26% Similarity=0.291 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHH
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLR 189 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R 189 (286)
+++..+.+.|++.+... .+.+|.++|-|.|-+.|+..+-..+.++.+++....
T Consensus 15 i~~~~vL~~Le~~~~~~--~~~fD~i~GTSaGaiia~~la~g~~~~e~~~~~~~~ 67 (288)
T cd07213 15 IVQLVLLKRLAEEFPSF--LDQIDLFAGTSAGSLIALGLALGYSPRQVLKLYEEV 67 (288)
T ss_pred HHHHHHHHHHHHhCccc--ccceeEEEEeCHHHHHHHHHHcCcCHHHHHHHHHHh
Confidence 34455556666665211 225899999999999999888778888887766543
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=58.90 E-value=13 Score=33.72 Aligned_cols=29 Identities=24% Similarity=0.160 Sum_probs=20.9
Q ss_pred HHHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
.+.+++.+ . .+-.++|||+|-.+|..++.
T Consensus 99 id~lk~~~-----~-~~I~LiG~SmGgava~~~A~ 127 (307)
T PRK13604 99 VDWLNTRG-----I-NNLGLIAASLSARIAYEVIN 127 (307)
T ss_pred HHHHHhcC-----C-CceEEEEECHHHHHHHHHhc
Confidence 34455555 4 56789999999988876654
No 52
>PLN02965 Probable pheophorbidase
Probab=57.02 E-value=12 Score=32.21 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=20.5
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
+..++..++ +.++-.++|||+|-..+..++
T Consensus 61 l~~~l~~l~-----~~~~~~lvGhSmGG~ia~~~a 90 (255)
T PLN02965 61 LFALLSDLP-----PDHKVILVGHSIGGGSVTEAL 90 (255)
T ss_pred HHHHHHhcC-----CCCCEEEEecCcchHHHHHHH
Confidence 445556665 314789999999987666553
No 53
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=56.54 E-value=46 Score=29.93 Aligned_cols=83 Identities=18% Similarity=0.304 Sum_probs=46.9
Q ss_pred HHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHhhccCC---C--cEEE-EeC
Q 023172 137 SLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA-GAFSFEDGLKLVKLRGAAMQEAADAAK---G--AMVS-IIG 209 (286)
Q Consensus 137 ~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a-G~ls~~dal~l~~~R~~l~~~~~~~~~---g--~mla-V~~ 209 (286)
++.+.+.|.+.. +..+.+..|.++|-|.|-+.|+..+ +.++.+|...+....+. +...... + .+.. -.-
T Consensus 23 ~~~vL~~Le~~~-~~~i~~~fDli~GTStGgiiA~~la~~~~~~~e~~~~y~~~~~---~iF~~~~~~~~~~~~~~~~~~ 98 (308)
T cd07211 23 ALEILRKIEKLT-GKPIHELFDYICGVSTGAILAFLLGLKKMSLDECEELYRKLGK---DVFSQNTYISGTSRLVLSHAY 98 (308)
T ss_pred HHHHHHHHHHHh-CCCchhhcCEEEecChhHHHHHHHhcccccHHHHHHHHHHHHH---HhcCCCccccchhhhhccCCc
Confidence 444445555543 1110112599999999999888876 46999998887654332 2111111 0 0110 002
Q ss_pred CCHHHHHHHHHHhc
Q 023172 210 LDSDKVQQLCDAAN 223 (286)
Q Consensus 210 ~~~~~~~~~l~~~~ 223 (286)
.+.+.+++++++..
T Consensus 99 y~~~~l~~~l~~~~ 112 (308)
T cd07211 99 YDTETWEKILKEMM 112 (308)
T ss_pred cChHHHHHHHHHHh
Confidence 46677888887764
No 54
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=56.09 E-value=17 Score=32.15 Aligned_cols=29 Identities=31% Similarity=0.246 Sum_probs=22.2
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
..+.+++.+ + +|-.++|||+|-..|+.++
T Consensus 89 ai~~L~~~~-----~-~~v~LvG~SmGG~vAl~~A 117 (266)
T TIGR03101 89 AYRWLIEQG-----H-PPVTLWGLRLGALLALDAA 117 (266)
T ss_pred HHHHHHhcC-----C-CCEEEEEECHHHHHHHHHH
Confidence 345666666 5 6889999999998888665
No 55
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=55.68 E-value=15 Score=31.29 Aligned_cols=28 Identities=21% Similarity=0.106 Sum_probs=21.2
Q ss_pred HHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 142 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
.++...+ + ++-.++|||+|-+.+..++.
T Consensus 88 ~~~~~~~-----~-~~~~liG~S~Gg~ia~~~a~ 115 (288)
T TIGR01250 88 EVREKLG-----L-DKFYLLGHSWGGMLAQEYAL 115 (288)
T ss_pred HHHHHcC-----C-CcEEEEEeehHHHHHHHHHH
Confidence 4456666 5 56789999999988887664
No 56
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=55.27 E-value=15 Score=33.77 Aligned_cols=27 Identities=19% Similarity=0.238 Sum_probs=20.0
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHH
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALA 172 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~ 172 (286)
+.+++..++ + ++-.++|||+|-+.|+.
T Consensus 145 l~~~l~~l~-----~-~~~~lvGhS~Gg~ia~~ 171 (360)
T PLN02679 145 ILDFLEEVV-----Q-KPTVLIGNSVGSLACVI 171 (360)
T ss_pred HHHHHHHhc-----C-CCeEEEEECHHHHHHHH
Confidence 445666777 6 68889999999876653
No 57
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=54.23 E-value=16 Score=33.27 Aligned_cols=30 Identities=33% Similarity=0.337 Sum_probs=22.0
Q ss_pred HHHHHHHHccCCCCccCCc-cEEEeccHHHHHHHHHh
Q 023172 139 AAVELLRARDGGQQIIDSV-DVTCGLSLGEYTALAFA 174 (286)
Q Consensus 139 al~~~l~~~g~~~~~i~~p-~~v~GhS~GE~aAa~~a 174 (286)
.+..++..+| + .+ -.++|||+|-+.|+..+
T Consensus 115 ~~~~~~~~l~-----~-~~~~~l~G~S~Gg~ia~~~a 145 (351)
T TIGR01392 115 AQKLLLDHLG-----I-EQIAAVVGGSMGGMQALEWA 145 (351)
T ss_pred HHHHHHHHcC-----C-CCceEEEEECHHHHHHHHHH
Confidence 3445667788 6 45 78999999987777654
No 58
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=53.86 E-value=15 Score=31.86 Aligned_cols=30 Identities=40% Similarity=0.376 Sum_probs=22.0
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
+.+++...+ + ++-.++|||+|-+.++..+.
T Consensus 91 l~~~l~~l~-----~-~~~~lvG~S~Gg~ia~~~a~ 120 (282)
T TIGR03343 91 VKGLMDALD-----I-EKAHLVGNSMGGATALNFAL 120 (282)
T ss_pred HHHHHHHcC-----C-CCeeEEEECchHHHHHHHHH
Confidence 345667777 6 67789999999877766543
No 59
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=53.64 E-value=20 Score=29.46 Aligned_cols=29 Identities=31% Similarity=0.259 Sum_probs=20.8
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
+..+++..| + +.-.++|||+|-..++..+
T Consensus 34 ~~~~~~~l~-----~-~~~~~vG~S~Gg~~~~~~a 62 (230)
T PF00561_consen 34 LEALREALG-----I-KKINLVGHSMGGMLALEYA 62 (230)
T ss_dssp HHHHHHHHT-----T-SSEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhC-----C-CCeEEEEECCChHHHHHHH
Confidence 344556777 6 5578999999987776654
No 60
>PRK10349 carboxylesterase BioH; Provisional
Probab=52.10 E-value=20 Score=30.71 Aligned_cols=20 Identities=30% Similarity=0.258 Sum_probs=16.1
Q ss_pred cCCccEEEeccHHHHHHHHHh
Q 023172 154 IDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 154 i~~p~~v~GhS~GE~aAa~~a 174 (286)
+ ++-.++|||+|-+.|...+
T Consensus 73 ~-~~~~lvGhS~Gg~ia~~~a 92 (256)
T PRK10349 73 P-DKAIWLGWSLGGLVASQIA 92 (256)
T ss_pred C-CCeEEEEECHHHHHHHHHH
Confidence 5 5668899999998888664
No 61
>PLN02578 hydrolase
Probab=51.69 E-value=19 Score=33.03 Aligned_cols=28 Identities=32% Similarity=0.399 Sum_probs=21.1
Q ss_pred HHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
.+.++..+ . +|-.++|||+|-+.|+.++
T Consensus 143 ~~~i~~~~-----~-~~~~lvG~S~Gg~ia~~~A 170 (354)
T PLN02578 143 ADFVKEVV-----K-EPAVLVGNSLGGFTALSTA 170 (354)
T ss_pred HHHHHHhc-----c-CCeEEEEECHHHHHHHHHH
Confidence 34556665 4 7889999999998877765
No 62
>PRK10673 acyl-CoA esterase; Provisional
Probab=51.23 E-value=21 Score=30.31 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=16.1
Q ss_pred CccEEEeccHHHHHHHHHhc
Q 023172 156 SVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (286)
++-.++|||+|-..|+.++.
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~ 100 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTA 100 (255)
T ss_pred CceEEEEECHHHHHHHHHHH
Confidence 56689999999988876653
No 63
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=51.07 E-value=55 Score=30.17 Aligned_cols=68 Identities=21% Similarity=0.125 Sum_probs=43.3
Q ss_pred CccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHH-HHHHhhccC--CCcEEEEeCCCHHHHHHHHHHhcc
Q 023172 156 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGA-AMQEAADAA--KGAMVSIIGLDSDKVQQLCDAANQ 224 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~-l~~~~~~~~--~g~mlaV~~~~~~~~~~~l~~~~~ 224 (286)
..|.+.|-|.|-+.|+..+-.++.+|.+.+....+. ++...+... ...-+.- ..+.+.++++|.++..
T Consensus 41 ~FDlIaGTStGgIIAa~la~g~s~~ei~~~y~~~~~~iF~~~~~~~~l~~~~~~~-~y~~~~L~~~L~~~fg 111 (344)
T cd07217 41 YFDFVGGTSTGSIIAACIALGMSVTDLLSFYTLNGVNMFDKAWLAQRLFLNKLYN-QYDPTNLGKKLNTVFP 111 (344)
T ss_pred cccEEEEecHHHHHHHHHHcCCCHHHHHHHHHhhhhhhcCchhhhhhcccccccc-ccCcHHHHHHHHHHcC
Confidence 369999999999999998888999999988765543 222210000 0000000 1566778888887643
No 64
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=50.87 E-value=54 Score=30.27 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=25.3
Q ss_pred HHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhccC
Q 023172 138 LAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAF 177 (286)
Q Consensus 138 ~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~l 177 (286)
-+|...+++.| - .|-.+.|.|||-.-|+.++..+
T Consensus 163 ~~Ll~Wl~~~G-----~-~~~g~~G~SmGG~~A~laa~~~ 196 (348)
T PF09752_consen 163 RALLHWLEREG-----Y-GPLGLTGISMGGHMAALAASNW 196 (348)
T ss_pred HHHHHHHHhcC-----C-CceEEEEechhHhhHHhhhhcC
Confidence 46667777777 4 6889999999987777665444
No 65
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=50.54 E-value=19 Score=29.76 Aligned_cols=30 Identities=40% Similarity=0.543 Sum_probs=20.9
Q ss_pred HHHHHHccCCCCccCCccEEEeccHHHHHHHHHhcc
Q 023172 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 176 (286)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ 176 (286)
.+.++..+ . ++-.++|||+|-+.+..++..
T Consensus 70 ~~~i~~~~-----~-~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 70 LALLDHLG-----I-ERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHhC-----C-CceEEEEeCchHHHHHHHHHH
Confidence 34555555 4 566899999998877766543
No 66
>PRK07581 hypothetical protein; Validated
Probab=49.81 E-value=21 Score=32.24 Aligned_cols=25 Identities=20% Similarity=0.280 Sum_probs=18.9
Q ss_pred HHHccCCCCccCCc-cEEEeccHHHHHHHHHh
Q 023172 144 LRARDGGQQIIDSV-DVTCGLSLGEYTALAFA 174 (286)
Q Consensus 144 l~~~g~~~~~i~~p-~~v~GhS~GE~aAa~~a 174 (286)
+..+| | ++ ..++|||+|-+.|+..+
T Consensus 117 ~~~lg-----i-~~~~~lvG~S~GG~va~~~a 142 (339)
T PRK07581 117 TEKFG-----I-ERLALVVGWSMGAQQTYHWA 142 (339)
T ss_pred HHHhC-----C-CceEEEEEeCHHHHHHHHHH
Confidence 34588 7 55 56899999988887654
No 67
>PF05798 Phage_FRD3: Bacteriophage FRD3 protein; InterPro: IPR008765 This is a group of proteins of unknown function from bacteriophage T2 and related phage.
Probab=49.47 E-value=46 Score=22.82 Aligned_cols=42 Identities=10% Similarity=0.134 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHHhcccCCCCCceEEEee-eCC---CCEEEEcCHHHHHHHHH
Q 023172 210 LDSDKVQQLCDAANQEVDEDNKVQIANY-LCP---GNYAVSGGVKGIEAVEA 257 (286)
Q Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~v~ia~~-Nsp---~~~vvsG~~~~l~~l~~ 257 (286)
++.|.++++++.. .+.+.|..+ |+| -+++|.|+.+++.++..
T Consensus 9 VDfEY~eEvIRNR------yPelsi~si~d~~f~~~~i~i~GPle~l~~FM~ 54 (75)
T PF05798_consen 9 VDFEYTEEVIRNR------YPELSITSIQDSKFCSIQIVIEGPLEDLTRFMA 54 (75)
T ss_pred eehHhHHHHHHcc------CCceEEEEeecCCcceEEEEEeccHHHHHHHHH
Confidence 4778888888863 456766554 554 45789999999998854
No 68
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=48.46 E-value=29 Score=28.43 Aligned_cols=20 Identities=30% Similarity=0.252 Sum_probs=15.9
Q ss_pred CccEEEeccHHHHHHHHHhc
Q 023172 156 SVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (286)
++-.++|||+|-..|+.++.
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~ 89 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYAL 89 (251)
T ss_pred CeEEEEEeccHHHHHHHHHH
Confidence 67789999999877776653
No 69
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=47.52 E-value=24 Score=32.69 Aligned_cols=31 Identities=35% Similarity=0.374 Sum_probs=22.3
Q ss_pred HHHHHHHHccCCCCccCCc-cEEEeccHHHHHHHHHhc
Q 023172 139 AAVELLRARDGGQQIIDSV-DVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 139 al~~~l~~~g~~~~~i~~p-~~v~GhS~GE~aAa~~aG 175 (286)
.+..++..+| + ++ ..++|||+|-..|...+.
T Consensus 135 ~~~~~l~~l~-----~-~~~~~lvG~S~Gg~ia~~~a~ 166 (379)
T PRK00175 135 AQARLLDALG-----I-TRLAAVVGGSMGGMQALEWAI 166 (379)
T ss_pred HHHHHHHHhC-----C-CCceEEEEECHHHHHHHHHHH
Confidence 3456667778 6 55 489999999877766543
No 70
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=46.47 E-value=1.3e+02 Score=24.83 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=21.9
Q ss_pred CCCcEEEEecCCCCcccccchh-hhccHHHHHHHHH
Q 023172 68 YKPTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKK 102 (286)
Q Consensus 68 ~~~~~~fvF~Gqg~~~~~m~~~-~~~~p~~~~~~~~ 102 (286)
...+++++.||-++...++... +.....+++.+.+
T Consensus 17 ~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~ 52 (177)
T PF06259_consen 17 TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAAR 52 (177)
T ss_pred CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHH
Confidence 3567899999999987766655 3333333443333
No 71
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=46.37 E-value=26 Score=29.22 Aligned_cols=29 Identities=31% Similarity=0.305 Sum_probs=20.5
Q ss_pred HHHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
.+.++..+ + ++-.++|||+|-..|..++.
T Consensus 71 ~~~i~~~~-----~-~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 71 LQLLDALN-----I-ERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred HHHHHHhC-----C-CcEEEEEechhHHHHHHHHH
Confidence 34445555 4 56789999999988876654
No 72
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=46.32 E-value=19 Score=29.52 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=15.2
Q ss_pred CccEEEeccHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (286)
+|..++|||+|-++++..+
T Consensus 55 ~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp TTEEEEEETHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHH
Confidence 6779999999987776543
No 73
>PRK06489 hypothetical protein; Provisional
Probab=46.07 E-value=34 Score=31.36 Aligned_cols=25 Identities=16% Similarity=0.323 Sum_probs=17.6
Q ss_pred HHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 145 RARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 145 ~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
..+| +++...++|||+|-+.|+..+
T Consensus 148 ~~lg-----i~~~~~lvG~SmGG~vAl~~A 172 (360)
T PRK06489 148 EGLG-----VKHLRLILGTSMGGMHAWMWG 172 (360)
T ss_pred HhcC-----CCceeEEEEECHHHHHHHHHH
Confidence 5567 633335899999988877654
No 74
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=45.85 E-value=27 Score=32.72 Aligned_cols=27 Identities=33% Similarity=0.496 Sum_probs=20.2
Q ss_pred HHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 142 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
+.+...+ + ++-.++|||+|-+.|+.++
T Consensus 168 ~~~~~l~-----~-~~~~lvGhS~GG~la~~~a 194 (402)
T PLN02894 168 EWRKAKN-----L-SNFILLGHSFGGYVAAKYA 194 (402)
T ss_pred HHHHHcC-----C-CCeEEEEECHHHHHHHHHH
Confidence 3444556 5 6788999999998888654
No 75
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=44.91 E-value=25 Score=28.63 Aligned_cols=29 Identities=38% Similarity=0.391 Sum_probs=20.1
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
+..++...| + .+-.++|||+|.+.+..++
T Consensus 78 ~~~~~~~~~-----~-~~~~l~G~S~Gg~~~~~~~ 106 (282)
T COG0596 78 LAALLDALG-----L-EKVVLVGHSMGGAVALALA 106 (282)
T ss_pred HHHHHHHhC-----C-CceEEEEecccHHHHHHHH
Confidence 344556666 5 4578999999977666554
No 76
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=44.21 E-value=20 Score=27.60 Aligned_cols=17 Identities=41% Similarity=0.216 Sum_probs=12.1
Q ss_pred cEEEeccHHHHHHHHHh
Q 023172 158 DVTCGLSLGEYTALAFA 174 (286)
Q Consensus 158 ~~v~GhS~GE~aAa~~a 174 (286)
-.+.|||+|--.|..++
T Consensus 66 i~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 66 IVITGHSLGGALASLAA 82 (140)
T ss_dssp EEEEEETHHHHHHHHHH
T ss_pred chhhccchHHHHHHHHH
Confidence 35799999966555544
No 77
>PF10369 ALS_ss_C: Small subunit of acetolactate synthase; InterPro: IPR019455 This entry represents the C-terminal domain of the small subunit of acetolactate synthase (the N-terminal domain being an ACT domain). Acetolactate synthase is a tetrameric enzyme, composed of two large and two small subunits, which catalyses the first step in branched-chain amino acid biosynthesis. This reaction is sensitive to certain herbicides []. ; PDB: 2F1F_B 2FGC_A 2PC6_A.
Probab=42.93 E-value=83 Score=21.96 Aligned_cols=44 Identities=20% Similarity=0.318 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhcccCCCCCceEEEeeeCCCCEEE--EcCHHHHHHHHHHHHhcCC
Q 023172 212 SDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAV--SGGVKGIEAVEAKAKSFKA 264 (286)
Q Consensus 212 ~~~~~~~l~~~~~~~~~~~~v~ia~~Nsp~~~vv--sG~~~~l~~l~~~l~~~~~ 264 (286)
..++.++++.++ ..|.-++ |+.++| +|+++.++.|.+.++..|+
T Consensus 16 r~ei~~l~~~f~--------a~ivd~~-~~~~iie~tG~~~kid~fi~~l~~~gi 61 (75)
T PF10369_consen 16 RSEILQLAEIFR--------ARIVDVS-PDSIIIELTGTPEKIDAFIKLLKPFGI 61 (75)
T ss_dssp HHHHHHHHHHTT---------EEEEEE-TTEEEEEEEE-HHHHHHHHHHSTGGGE
T ss_pred HHHHHHHHHHhC--------CEEEEEC-CCEEEEEEcCCHHHHHHHHHHhhhcCC
Confidence 355666666652 3444444 555554 7999999999999998876
No 78
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=41.24 E-value=35 Score=30.94 Aligned_cols=29 Identities=31% Similarity=0.351 Sum_probs=21.4
Q ss_pred HHHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
..++...+ + .+-.++|||+|-+.|..++.
T Consensus 188 ~~~~~~~~-----~-~~~~lvG~S~Gg~~a~~~a~ 216 (371)
T PRK14875 188 LAFLDALG-----I-ERAHLVGHSMGGAVALRLAA 216 (371)
T ss_pred HHHHHhcC-----C-ccEEEEeechHHHHHHHHHH
Confidence 34556666 5 57789999999988886553
No 79
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=40.79 E-value=38 Score=27.75 Aligned_cols=19 Identities=37% Similarity=0.412 Sum_probs=15.5
Q ss_pred CccEEEeccHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (286)
.+-.++|||+|-+.++.++
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a 83 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIA 83 (245)
T ss_pred CCeEEEEEcHHHHHHHHHH
Confidence 5778999999998877654
No 80
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=40.27 E-value=45 Score=28.65 Aligned_cols=19 Identities=21% Similarity=0.195 Sum_probs=15.5
Q ss_pred CccEEEeccHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (286)
++-.++|||||-+.|-.+.
T Consensus 85 ~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 85 RSVILVGHSMGGLVARSAL 103 (225)
T ss_pred CceEEEEEchhhHHHHHHH
Confidence 6778999999988877654
No 81
>PRK05855 short chain dehydrogenase; Validated
Probab=39.98 E-value=44 Score=32.32 Aligned_cols=32 Identities=9% Similarity=-0.041 Sum_probs=21.5
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhcc
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 176 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ 176 (286)
+..+++.++ +++|-.++|||+|-+.+..++..
T Consensus 83 l~~~i~~l~-----~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 83 FAAVIDAVS-----PDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHHHHHhC-----CCCcEEEEecChHHHHHHHHHhC
Confidence 444556666 43567899999998777655433
No 82
>PLN03090 auxin-responsive family protein; Provisional
Probab=38.87 E-value=65 Score=24.31 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=27.7
Q ss_pred CcEEEEecCCCCcccccchhhhccHHHHHHHHHHHHHcCCC
Q 023172 70 PTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFD 110 (286)
Q Consensus 70 ~~~~fvF~Gqg~~~~~m~~~~~~~p~~~~~~~~~~~~lg~~ 110 (286)
....-|+-|......-.--.|..+|.|++.++..++-+|++
T Consensus 42 kG~~aVyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeEfGf~ 82 (104)
T PLN03090 42 KGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFGFD 82 (104)
T ss_pred CCcEEEEECCCCEEEEEEHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34556667765322222223778999999999999888875
No 83
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=38.68 E-value=39 Score=28.50 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=18.1
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHH
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAF 173 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~ 173 (286)
+.+.+++.| .-|.|+|.|+|-..|+..
T Consensus 93 l~~~i~~~G-------PfdGvlGFSQGA~lAa~l 119 (212)
T PF03959_consen 93 LRDYIEENG-------PFDGVLGFSQGAALAALL 119 (212)
T ss_dssp HHHHHHHH----------SEEEEETHHHHHHHHH
T ss_pred HHHHHHhcC-------CeEEEEeecHHHHHHHHH
Confidence 446677777 459999999997666553
No 84
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=38.17 E-value=39 Score=32.29 Aligned_cols=30 Identities=13% Similarity=0.046 Sum_probs=21.5
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
+-++++..+ . +|-.++|||||-+.+.+...
T Consensus 152 Ie~~~~~~g-----~-~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 152 LETVYKASG-----G-KKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHcC-----C-CCEEEEEECHhHHHHHHHHH
Confidence 334445555 3 68899999999988887653
No 85
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=37.92 E-value=41 Score=29.56 Aligned_cols=30 Identities=13% Similarity=0.123 Sum_probs=20.4
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
+.+.+.+.+. . ++-.++|||+|-+.+..++
T Consensus 76 l~~~i~~l~~----~-~~v~lvGhS~GG~v~~~~a 105 (273)
T PLN02211 76 LIDFLSSLPE----N-EKVILVGHSAGGLSVTQAI 105 (273)
T ss_pred HHHHHHhcCC----C-CCEEEEEECchHHHHHHHH
Confidence 4455555530 2 5778999999988777665
No 86
>cd02407 PTH2_family Peptidyl-tRNA hydrolase, type 2 (PTH2)_like . Peptidyl-tRNA hydrolase activity releases tRNA from the premature translation termination product peptidyl-tRNA. Two structurally different enzymes have been reported to encode such activity, Pth present in bacteria and eukaryotes and Pth2 present in archaea and eukaryotes.
Probab=37.91 E-value=1.7e+02 Score=22.42 Aligned_cols=19 Identities=21% Similarity=0.170 Sum_probs=14.5
Q ss_pred CccEEEeccHHHHHHHHHhcc
Q 023172 156 SVDVTCGLSLGEYTALAFAGA 176 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (286)
++| ++.|.|.++|-|+=.+
T Consensus 8 r~d--l~m~~GKiaAQ~~HAa 26 (115)
T cd02407 8 RND--LKMGKGKIAAQCAHAA 26 (115)
T ss_pred ECC--CCCChhhHHHHHHHHH
Confidence 677 6999999998776443
No 87
>PRK05320 rhodanese superfamily protein; Provisional
Probab=37.65 E-value=1e+02 Score=27.16 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHhcccCCCCCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhc
Q 023172 211 DSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSF 262 (286)
Q Consensus 211 ~~~~~~~~l~~~~~~~~~~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~ 262 (286)
+.+.+++.+......++-.++|.||.- --+.+|||+.+.++.+...++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~G~i~ia~e--GiN~t~~g~~~~id~~~~~l~~~ 65 (257)
T PRK05320 16 DPETLRPLVLARCEALGLKGTILLAPE--GINLFLAGTREAIDAFYAWLRAD 65 (257)
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCC--CceEEEEeeHHHHHHHHHHHhhC
Confidence 456666666665555444678888873 11347999999999999999864
No 88
>PRK01415 hypothetical protein; Validated
Probab=37.53 E-value=1.2e+02 Score=26.59 Aligned_cols=50 Identities=12% Similarity=0.035 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHhcccCCCCCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhc
Q 023172 211 DSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSF 262 (286)
Q Consensus 211 ~~~~~~~~l~~~~~~~~~~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~ 262 (286)
+.+.+++.+......++-.++|.||-- --+.+|||+.++++++.+.|+..
T Consensus 18 ~~~~~~~~l~~~~~~~~~~G~i~la~E--GIN~tisg~~~~~~~~~~~l~~~ 67 (247)
T PRK01415 18 EPANLIPKLLLIGKRKYVRGTILLANE--GFNGSFSGSYENVNLVLEELIKL 67 (247)
T ss_pred CHHHHHHHHHHHHHHcCCeeEEEEccC--ccceEeeCCHHHHHHHHHHHHhC
Confidence 445555555555444444678888873 11347999999999999999873
No 89
>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []. Proteins from this ARG7 auxin responsive genes family have no identified functional role [].
Probab=37.33 E-value=67 Score=23.98 Aligned_cols=42 Identities=19% Similarity=0.282 Sum_probs=30.1
Q ss_pred CCcEEEEecCCCCcccccchhhhccHHHHHHHHHHHHHcCCC
Q 023172 69 KPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFD 110 (286)
Q Consensus 69 ~~~~~fvF~Gqg~~~~~m~~~~~~~p~~~~~~~~~~~~lg~~ 110 (286)
+...+.||-|......-.-..|..+|.|++.++...+.+|++
T Consensus 37 p~G~~~VyVG~~~~Rfvvp~~~L~hp~f~~LL~~aeeEfG~~ 78 (100)
T PF02519_consen 37 PKGHFAVYVGEERRRFVVPVSYLNHPLFQELLEQAEEEFGFD 78 (100)
T ss_pred CCCeEEEEeCccceEEEechHHcCchhHHHHHHHHhhhcCcC
Confidence 356778888884333223334788999999999999887766
No 90
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=37.18 E-value=1.4e+02 Score=25.83 Aligned_cols=35 Identities=31% Similarity=0.364 Sum_probs=28.7
Q ss_pred CccEEEeccHHHHHHHHHhcc-CCHHHHHHHHHHHH
Q 023172 156 SVDVTCGLSLGEYTALAFAGA-FSFEDGLKLVKLRG 190 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~-ls~~dal~l~~~R~ 190 (286)
..|.++|-|.|-+.|+..+-. ++.++..++....+
T Consensus 34 ~fd~i~GtS~G~iia~~l~~~~~~~~~~~~~~~~~~ 69 (258)
T cd07199 34 LFDLIAGTSTGGIIALGLALGRYSAEELVELYEELG 69 (258)
T ss_pred ccceeeeccHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence 379999999999888877666 99999998766544
No 91
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.71 E-value=1.2e+02 Score=27.34 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=28.7
Q ss_pred ccEEEeccHHHHHHHHHhc-cCCHHHHHHHHHHHHH
Q 023172 157 VDVTCGLSLGEYTALAFAG-AFSFEDGLKLVKLRGA 191 (286)
Q Consensus 157 p~~v~GhS~GE~aAa~~aG-~ls~~dal~l~~~R~~ 191 (286)
.|.++|-|.|-+.|+..+. .++.+|.+.+....+.
T Consensus 43 fDli~GTStGgiiA~~l~~~~~t~~e~~~~y~~~~~ 78 (309)
T cd07216 43 FDLIGGTSTGGLIAIMLGRLRMTVDECIDAYTRLAK 78 (309)
T ss_pred cCeeeeccHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 4899999999999998874 6899999887665553
No 92
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.63 E-value=26 Score=30.67 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=14.3
Q ss_pred CccEEEeccHHHHHHHHH
Q 023172 156 SVDVTCGLSLGEYTALAF 173 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~ 173 (286)
+|-+++|||||-+-|.=+
T Consensus 74 ~P~alfGHSmGa~lAfEv 91 (244)
T COG3208 74 APFALFGHSMGAMLAFEV 91 (244)
T ss_pred CCeeecccchhHHHHHHH
Confidence 799999999996665543
No 93
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=35.20 E-value=33 Score=27.04 Aligned_cols=17 Identities=29% Similarity=0.040 Sum_probs=12.5
Q ss_pred cEEEeccHHHHHHHHHh
Q 023172 158 DVTCGLSLGEYTALAFA 174 (286)
Q Consensus 158 ~~v~GhS~GE~aAa~~a 174 (286)
-.++|||+|--.|..++
T Consensus 30 i~v~GHSlGg~lA~l~a 46 (153)
T cd00741 30 IHVTGHSLGGALAGLAG 46 (153)
T ss_pred EEEEEcCHHHHHHHHHH
Confidence 36899999976665544
No 94
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=34.94 E-value=51 Score=29.26 Aligned_cols=27 Identities=33% Similarity=0.276 Sum_probs=19.4
Q ss_pred HHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 142 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
.++..++ + ++-.++|||+|-..++..+
T Consensus 87 ~l~~~l~-----~-~~~~lvG~S~GG~ia~~~a 113 (306)
T TIGR01249 87 KLREKLG-----I-KNWLVFGGSWGSTLALAYA 113 (306)
T ss_pred HHHHHcC-----C-CCEEEEEECHHHHHHHHHH
Confidence 3445566 5 5678999999987776654
No 95
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=34.76 E-value=53 Score=27.99 Aligned_cols=19 Identities=42% Similarity=0.601 Sum_probs=16.1
Q ss_pred Ccc--EEEeccHHHHHHHHHh
Q 023172 156 SVD--VTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~--~v~GhS~GE~aAa~~a 174 (286)
.|+ +++|+|+|-+.|+.++
T Consensus 113 ~~~~~~i~G~S~GG~~Al~~~ 133 (251)
T PF00756_consen 113 DPDRRAIAGHSMGGYGALYLA 133 (251)
T ss_dssp EECCEEEEEETHHHHHHHHHH
T ss_pred ccceeEEeccCCCcHHHHHHH
Confidence 566 9999999999998864
No 96
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=34.65 E-value=31 Score=29.32 Aligned_cols=18 Identities=33% Similarity=0.257 Sum_probs=13.2
Q ss_pred ccEEEeccHHHHHHHHHh
Q 023172 157 VDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 157 p~~v~GhS~GE~aAa~~a 174 (286)
+-.+.|||+|--.|..++
T Consensus 129 ~i~vtGHSLGGaiA~l~a 146 (229)
T cd00519 129 KIIVTGHSLGGALASLLA 146 (229)
T ss_pred eEEEEccCHHHHHHHHHH
Confidence 446899999976666544
No 97
>PRK03204 haloalkane dehalogenase; Provisional
Probab=33.68 E-value=49 Score=29.13 Aligned_cols=27 Identities=15% Similarity=0.188 Sum_probs=19.3
Q ss_pred HHHHHHccCCCCccCCccEEEeccHHHHHHHHH
Q 023172 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAF 173 (286)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~ 173 (286)
..++..++ + ++-.++|||+|-..|...
T Consensus 92 ~~~~~~~~-----~-~~~~lvG~S~Gg~va~~~ 118 (286)
T PRK03204 92 GEFVDHLG-----L-DRYLSMGQDWGGPISMAV 118 (286)
T ss_pred HHHHHHhC-----C-CCEEEEEECccHHHHHHH
Confidence 34556667 6 678899999997666543
No 98
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=33.63 E-value=51 Score=28.12 Aligned_cols=13 Identities=23% Similarity=0.199 Sum_probs=11.3
Q ss_pred CccEEEeccHHHH
Q 023172 156 SVDVTCGLSLGEY 168 (286)
Q Consensus 156 ~p~~v~GhS~GE~ 168 (286)
+|-+++|||+|-.
T Consensus 95 RPfILaGHSQGs~ 107 (207)
T PF11288_consen 95 RPFILAGHSQGSM 107 (207)
T ss_pred CCEEEEEeChHHH
Confidence 7999999999943
No 99
>cd02394 vigilin_like_KH K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has been shown to bind RNA and to associate with both soluble and membrane-bound polyribosomes as a mRNP component. Bicaudal-C is a RNA-binding molecule believed to function in embryonic development at the post-transcriptional level. In general, KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA.
Probab=32.89 E-value=1e+02 Score=20.07 Aligned_cols=45 Identities=9% Similarity=0.288 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHHhcccCCCCCceEEEee-eCCCCEEEEcCHHHHHHHHHHH
Q 023172 209 GLDSDKVQQLCDAANQEVDEDNKVQIANY-LCPGNYAVSGGVKGIEAVEAKA 259 (286)
Q Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~v~ia~~-Nsp~~~vvsG~~~~l~~l~~~l 259 (286)
|-.-..++++.+..+. .+.+.-. +..+.++|+|+.+.+....+.+
T Consensus 16 G~~G~~i~~i~~~~g~------~I~i~~~~~~~~~v~I~G~~~~v~~A~~~i 61 (62)
T cd02394 16 GKKGSNIRKIMEETGV------KIRFPDPGSKSDTITITGPKENVEKAKEEI 61 (62)
T ss_pred CCCCCcHHHHHHHhCC------EEEcCCCCCCCCEEEEEcCHHHHHHHHHHh
Confidence 4444555666555422 2333322 2357789999999988776654
No 100
>PLN03219 uncharacterized protein; Provisional
Probab=32.57 E-value=94 Score=23.58 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=27.8
Q ss_pred CcEEEEecCCCCcccc-cchh-hhccHHHHHHHHHHHHHcCCC
Q 023172 70 PTNAFLFPGQGAQAVG-MGKE-AQSVPAAAELYKKANDILGFD 110 (286)
Q Consensus 70 ~~~~fvF~Gqg~~~~~-m~~~-~~~~p~~~~~~~~~~~~lg~~ 110 (286)
....-|+-|++..... .-.. |..+|.|++.++++++.+|++
T Consensus 41 kGh~aVYVG~~~E~kRFvVPi~yL~hP~F~~LL~~AeEEfGf~ 83 (108)
T PLN03219 41 KGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEECGFH 83 (108)
T ss_pred CCeEEEEECCCCCceEEEEEHHHcCChHHHHHHHHHHHHhCCC
Confidence 4456667777432111 1222 678999999999999988875
No 101
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=32.39 E-value=40 Score=27.82 Aligned_cols=17 Identities=29% Similarity=0.298 Sum_probs=13.5
Q ss_pred HHHHHccCCCCccCCccEEEecc
Q 023172 142 ELLRARDGGQQIIDSVDVTCGLS 164 (286)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS 164 (286)
..|++.| . .||.|+|||
T Consensus 58 ~~L~~~G-----f-~PDvI~~H~ 74 (171)
T PF12000_consen 58 RQLRAQG-----F-VPDVIIAHP 74 (171)
T ss_pred HHHHHcC-----C-CCCEEEEcC
Confidence 4556668 5 799999998
No 102
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=32.33 E-value=95 Score=24.77 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 135 a~~~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
+.++...+.|.+.+. .+.++.+.|.|.|-+.++..+
T Consensus 11 ~~~~gvl~~l~~~~~----~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 11 MYHAGVLSALAERGL----LDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHHHHhCC----ccCCCEEEEEcHHHHHHHHHh
Confidence 367777888888771 125899999999999999888
No 103
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=32.28 E-value=31 Score=30.40 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=16.5
Q ss_pred CccEEEeccHHHHHHHHHhccC
Q 023172 156 SVDVTCGLSLGEYTALAFAGAF 177 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~l 177 (286)
.+-.++|||+|-|-++-+.-.+
T Consensus 84 ~~liLiGHSIGayi~levl~r~ 105 (266)
T PF10230_consen 84 VKLILIGHSIGAYIALEVLKRL 105 (266)
T ss_pred CcEEEEeCcHHHHHHHHHHHhc
Confidence 3557899999999988664433
No 104
>PRK10749 lysophospholipase L2; Provisional
Probab=32.03 E-value=57 Score=29.40 Aligned_cols=18 Identities=17% Similarity=0.108 Sum_probs=14.7
Q ss_pred CccEEEeccHHHHHHHHH
Q 023172 156 SVDVTCGLSLGEYTALAF 173 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~ 173 (286)
.|-.++|||+|-..|+..
T Consensus 131 ~~~~l~GhSmGG~ia~~~ 148 (330)
T PRK10749 131 RKRYALAHSMGGAILTLF 148 (330)
T ss_pred CCeEEEEEcHHHHHHHHH
Confidence 678899999998877643
No 105
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=32.00 E-value=66 Score=26.83 Aligned_cols=18 Identities=33% Similarity=0.377 Sum_probs=15.1
Q ss_pred ccEEEeccHHHHHHHHHh
Q 023172 157 VDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 157 p~~v~GhS~GE~aAa~~a 174 (286)
|-.++|||+|-+.|.-+|
T Consensus 67 p~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp SEEEEEETHHHHHHHHHH
T ss_pred CeeehccCccHHHHHHHH
Confidence 889999999987777655
No 106
>cd02430 PTH2 Peptidyl-tRNA hydrolase, type 2 (PTH2). Peptidyl-tRNA hydrolase (PTH) activity releases tRNA from the premature translation termination product peptidyl-tRNA, therefore allowing the tRNA and peptide to be reused in protein synthesis. PTH2 is present in archaea and eukaryotes.
Probab=31.97 E-value=1.5e+02 Score=22.71 Aligned_cols=61 Identities=11% Similarity=0.059 Sum_probs=31.0
Q ss_pred CccEEEeccHHHHHHHHHhccCCHHHHHHHHHHH-HHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLR-GAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAA 222 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R-~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~ 222 (286)
++|. +.|.|.++|-|+=.++..-. ..... ...++ .|....-.-..+..-+.+++.++.+..
T Consensus 8 r~DL--~m~~GKiaAQ~~HAa~~~~~---~~~~~~~~~~~-~W~~~G~~KiVl~~~~~~el~~l~~~a 69 (115)
T cd02430 8 RNDL--KMGKGKIAAQCAHAALGAYK---KAMKSNPELLR-AWEREGQKKIVLKVNSEEELLELKKKA 69 (115)
T ss_pred eCCC--CCCcchHHHHHHHHHHHHHH---HHHhcCHHHHH-HHHhcCCcEEEEecCCHHHHHHHHHHH
Confidence 5664 89999999998755443211 11111 11222 232222233333234677788877664
No 107
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=31.32 E-value=41 Score=26.77 Aligned_cols=19 Identities=37% Similarity=0.445 Sum_probs=15.6
Q ss_pred CccEEEeccHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (286)
+++.+.|-|.|-+.|++.+
T Consensus 27 ~~d~i~GtS~Gal~a~~~~ 45 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLA 45 (204)
T ss_dssp T-SEEEEECCHHHHHHHHH
T ss_pred CccEEEEcChhhhhHHHHH
Confidence 8999999999999996644
No 108
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=31.01 E-value=54 Score=30.35 Aligned_cols=20 Identities=30% Similarity=0.494 Sum_probs=15.6
Q ss_pred cCCccEEEeccHHHHHHHHHh
Q 023172 154 IDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 154 i~~p~~v~GhS~GE~aAa~~a 174 (286)
| .--.++|||+|-|-|+..|
T Consensus 159 L-~KmilvGHSfGGYLaa~YA 178 (365)
T KOG4409|consen 159 L-EKMILVGHSFGGYLAAKYA 178 (365)
T ss_pred C-cceeEeeccchHHHHHHHH
Confidence 5 5567999999998777554
No 109
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=30.91 E-value=43 Score=30.14 Aligned_cols=21 Identities=24% Similarity=0.237 Sum_probs=15.7
Q ss_pred CccEEEeccHHHHHHHHHhcc
Q 023172 156 SVDVTCGLSLGEYTALAFAGA 176 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (286)
.|-.++|||||--.|++++-.
T Consensus 146 ~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 146 PQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred CceEEEeccccchhhhhhhhh
Confidence 577889999997666666533
No 110
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=30.28 E-value=63 Score=29.49 Aligned_cols=30 Identities=23% Similarity=0.170 Sum_probs=21.6
Q ss_pred HHHHHHccCCCCccCCccEEEeccHHHHHHHHHhcc
Q 023172 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 176 (286)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ 176 (286)
-+.+++.+ . +|-.++|||+|-+.|...|-.
T Consensus 119 ~~~~~~~~-----~-~~~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 119 RRFVKEVF-----V-EPVSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred HHHHHhhc-----C-cceEEEEeCcHHHHHHHHHHh
Confidence 34455555 3 688899999999888876543
No 111
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=30.24 E-value=58 Score=31.57 Aligned_cols=26 Identities=31% Similarity=0.245 Sum_probs=20.5
Q ss_pred HHHHccCCCCccCCccEEEeccHHHHHHHHHh
Q 023172 143 LLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 143 ~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (286)
++...| + .+-.++|||+|-+.|..++
T Consensus 267 ll~~lg-----~-~k~~LVGhSmGG~iAl~~A 292 (481)
T PLN03087 267 VLERYK-----V-KSFHIVAHSLGCILALALA 292 (481)
T ss_pred HHHHcC-----C-CCEEEEEECHHHHHHHHHH
Confidence 456677 6 6788999999998888765
No 112
>PHA02857 monoglyceride lipase; Provisional
Probab=30.20 E-value=41 Score=29.04 Aligned_cols=19 Identities=21% Similarity=0.146 Sum_probs=15.9
Q ss_pred CccEEEeccHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (286)
+|-.++|||+|-..|...+
T Consensus 97 ~~~~lvG~S~GG~ia~~~a 115 (276)
T PHA02857 97 VPVFLLGHSMGATISILAA 115 (276)
T ss_pred CCEEEEEcCchHHHHHHHH
Confidence 5778999999998887765
No 113
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=29.96 E-value=39 Score=29.93 Aligned_cols=22 Identities=23% Similarity=0.005 Sum_probs=17.2
Q ss_pred CccEEEeccHHHHHHHHHhccC
Q 023172 156 SVDVTCGLSLGEYTALAFAGAF 177 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~l 177 (286)
+.-.++|||+|-..|..++..+
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~~~ 133 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGKRL 133 (275)
T ss_pred HHEEEEEecHHHHHHHHHHHHh
Confidence 4567999999998888876443
No 114
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=28.96 E-value=52 Score=24.93 Aligned_cols=20 Identities=25% Similarity=0.234 Sum_probs=16.4
Q ss_pred CccEEEeccHHHHHHHHHhc
Q 023172 156 SVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (286)
++-.++|||+|-..++.++.
T Consensus 61 ~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 61 DRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp CEEEEEEETHHHHHHHHHHH
T ss_pred CcEEEEEEccCcHHHHHHhh
Confidence 67789999999887777664
No 115
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=28.87 E-value=1.1e+02 Score=31.40 Aligned_cols=21 Identities=33% Similarity=0.434 Sum_probs=18.8
Q ss_pred cCCccEEEeccHHHHHHHHHhc
Q 023172 154 IDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 154 i~~p~~v~GhS~GE~aAa~~aG 175 (286)
+ .++.+.|.|.|-+.++..|.
T Consensus 65 ~-~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 65 V-RVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred C-CCceEEeeCHHHHHHHHHHc
Confidence 6 79999999999998888875
No 116
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=28.83 E-value=78 Score=27.73 Aligned_cols=19 Identities=32% Similarity=0.275 Sum_probs=14.5
Q ss_pred CccEEEeccHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (286)
+.-.++|||+|-+.++..+
T Consensus 100 ~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 100 RRIVAWGLCDAASAALLYA 118 (274)
T ss_pred CcEEEEEECHHHHHHHHHh
Confidence 3457899999988877653
No 117
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=28.47 E-value=72 Score=28.56 Aligned_cols=19 Identities=21% Similarity=0.167 Sum_probs=15.0
Q ss_pred CccEEEeccHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (286)
.|-.++|||+|-..|+.++
T Consensus 134 ~~i~l~GhSmGG~ia~~~a 152 (330)
T PLN02298 134 LPRFLYGESMGGAICLLIH 152 (330)
T ss_pred CCEEEEEecchhHHHHHHH
Confidence 3678999999988776544
No 118
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=28.28 E-value=80 Score=29.19 Aligned_cols=35 Identities=17% Similarity=0.059 Sum_probs=24.8
Q ss_pred HHHHHHHHHHc--cCCCCccCCccEEEeccHHHHHHHHHhccC
Q 023172 137 SLAAVELLRAR--DGGQQIIDSVDVTCGLSLGEYTALAFAGAF 177 (286)
Q Consensus 137 ~~al~~~l~~~--g~~~~~i~~p~~v~GhS~GE~aAa~~aG~l 177 (286)
...|++.+.+. | - +|-.++|||+|-.....|--.|
T Consensus 205 G~~LA~~L~~~~~G-----~-RpVtLvG~SLGarvI~~cL~~L 241 (345)
T PF05277_consen 205 GKVLADALLSRNQG-----E-RPVTLVGHSLGARVIYYCLLEL 241 (345)
T ss_pred HHHHHHHHHHhcCC-----C-CceEEEeecccHHHHHHHHHHH
Confidence 35667777654 5 3 8999999999977766664333
No 119
>PRK10985 putative hydrolase; Provisional
Probab=27.31 E-value=89 Score=28.10 Aligned_cols=16 Identities=25% Similarity=0.254 Sum_probs=12.8
Q ss_pred CccEEEeccHHHHHHH
Q 023172 156 SVDVTCGLSLGEYTAL 171 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa 171 (286)
.|-.++|||+|-..++
T Consensus 131 ~~~~~vG~S~GG~i~~ 146 (324)
T PRK10985 131 VPTAAVGYSLGGNMLA 146 (324)
T ss_pred CCEEEEEecchHHHHH
Confidence 6789999999986433
No 120
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=27.02 E-value=2.4e+02 Score=26.01 Aligned_cols=83 Identities=17% Similarity=0.208 Sum_probs=45.3
Q ss_pred CccEEEeccHHHHHHHHHhc-------cCCHHHHHHHHHHHHHH-HHHhhccCC--CcEE-EE--eCCCHHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFAG-------AFSFEDGLKLVKLRGAA-MQEAADAAK--GAMV-SI--IGLDSDKVQQLCDAA 222 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG-------~ls~~dal~l~~~R~~l-~~~~~~~~~--g~ml-aV--~~~~~~~~~~~l~~~ 222 (286)
..|.++|-|.|-+.|+..+- .++.+|.+.+-..++.- +......-. ..++ .+ -..+.+.++++|.++
T Consensus 43 ~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y~~~~~~iF~~~~~~~~~~~~~~~~~~~~~y~~~~L~~~L~~~ 122 (349)
T cd07214 43 YFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFYLENGPKIFPQSTGQFEDDRKKLRSLLGPKYDGVYLHDLLNEL 122 (349)
T ss_pred hCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhHHhcCCCcccchhHHHHHHHhccCccCcHHHHHHHHHH
Confidence 47999999999877776654 27888988876655432 111000000 0000 00 024667777777766
Q ss_pred cccC---CCCCceEEEeee
Q 023172 223 NQEV---DEDNKVQIANYL 238 (286)
Q Consensus 223 ~~~~---~~~~~v~ia~~N 238 (286)
.... +....+.|.+++
T Consensus 123 ~gd~~l~d~~~~v~I~a~d 141 (349)
T cd07214 123 LGDTRLSDTLTNVVIPTFD 141 (349)
T ss_pred hccccHhhhCCceEEEeEE
Confidence 4321 112356777766
No 121
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=26.15 E-value=1.1e+02 Score=25.56 Aligned_cols=20 Identities=35% Similarity=0.414 Sum_probs=16.5
Q ss_pred cEEEeccHHHHHHHHHhccC
Q 023172 158 DVTCGLSLGEYTALAFAGAF 177 (286)
Q Consensus 158 ~~v~GhS~GE~aAa~~aG~l 177 (286)
..++|.|+|-+-|.+.+-..
T Consensus 61 ~~liGSSlGG~~A~~La~~~ 80 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERY 80 (187)
T ss_pred eEEEEEChHHHHHHHHHHHh
Confidence 58999999999999876444
No 122
>PLN03220 uncharacterized protein; Provisional
Probab=26.01 E-value=1.6e+02 Score=22.24 Aligned_cols=21 Identities=24% Similarity=0.485 Sum_probs=18.9
Q ss_pred hhccHHHHHHHHHHHHHcCCC
Q 023172 90 AQSVPAAAELYKKANDILGFD 110 (286)
Q Consensus 90 ~~~~p~~~~~~~~~~~~lg~~ 110 (286)
|..+|.|++.++.+++-+|++
T Consensus 61 yL~hP~F~~LL~~AeEEfGf~ 81 (105)
T PLN03220 61 FLNHPSFKEFLSRAEEEFGFN 81 (105)
T ss_pred HcCChHHHHHHHHHHHHhCCC
Confidence 678999999999999988876
No 123
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=25.84 E-value=1.6e+02 Score=27.97 Aligned_cols=77 Identities=23% Similarity=0.334 Sum_probs=38.7
Q ss_pred CCCcEEEEecCCCCcccccchhhhccHHHHHHHHHHH-HHcCCChHHHhhCCCCCCCCCcccHhHHHHHHHH-HHHHHH-
Q 023172 68 YKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKAN-DILGFDLLEICTNGPKEKLDSTIISQPAIYVTSL-AAVELL- 144 (286)
Q Consensus 68 ~~~~~~fvF~Gqg~~~~~m~~~~~~~p~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~-al~~~l- 144 (286)
..-.++++++|+|. |...-++ +.+.++... -+.|+|-..++...-. |--++-.+ .+.+.+
T Consensus 258 ~sd~~av~~SGDGG-Wr~lDk~------v~~~l~~~gvpVvGvdsLRYfW~~rt----------Pe~~a~Dl~r~i~~y~ 320 (456)
T COG3946 258 NSDTVAVFYSGDGG-WRDLDKE------VAEALQKQGVPVVGVDSLRYFWSERT----------PEQIAADLSRLIRFYA 320 (456)
T ss_pred CcceEEEEEecCCc-hhhhhHH------HHHHHHHCCCceeeeehhhhhhccCC----------HHHHHHHHHHHHHHHH
Confidence 35578899999987 3222211 222222111 1246766655543211 00111111 122333
Q ss_pred HHccCCCCccCCccEEEeccHHH
Q 023172 145 RARDGGQQIIDSVDVTCGLSLGE 167 (286)
Q Consensus 145 ~~~g~~~~~i~~p~~v~GhS~GE 167 (286)
+.|| . ++-.++|||+|.
T Consensus 321 ~~w~-----~-~~~~liGySfGA 337 (456)
T COG3946 321 RRWG-----A-KRVLLIGYSFGA 337 (456)
T ss_pred HhhC-----c-ceEEEEeecccc
Confidence 4588 5 788999999994
No 124
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=24.99 E-value=65 Score=29.96 Aligned_cols=33 Identities=30% Similarity=0.199 Sum_probs=26.5
Q ss_pred CccEEEeccHHHHHHHHHhccCCHHHHHHHHHH
Q 023172 156 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 188 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~ 188 (286)
.+-.++|||+|-++++..+|+=..-+.+...+.
T Consensus 159 ~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~ 191 (365)
T COG4188 159 QRVGVLGHSFGGYTAMELAGAELDAEALLQHCE 191 (365)
T ss_pred cceEEEecccccHHHHHhccccccHHHHHHHhh
Confidence 577899999999999999998776666555544
No 125
>PF13117 Cag12: Cag pathogenicity island protein Cag12
Probab=24.87 E-value=1.9e+02 Score=22.16 Aligned_cols=35 Identities=11% Similarity=-0.135 Sum_probs=31.7
Q ss_pred ceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCC
Q 023172 231 KVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKAR 265 (286)
Q Consensus 231 ~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~ 265 (286)
.++-+...+++-+|++|+.+.+...+..|+++|.+
T Consensus 72 ~~~yalAH~~~iIv~~~~~~~~~~~K~wL~~nGa~ 106 (113)
T PF13117_consen 72 VVFYALAHSAKIIVLTGDGNLFFQYKNWLRKNGAT 106 (113)
T ss_pred eEeeeeeccccEEEEcCCHHHHHHHHHHHHHcCCc
Confidence 46788888999999999999999999999999983
No 126
>PRK15339 type III secretion system outer membrane pore InvG; Provisional
Probab=23.64 E-value=1.7e+02 Score=28.95 Aligned_cols=85 Identities=15% Similarity=0.184 Sum_probs=57.2
Q ss_pred HhccCCHHHHHHHHHHHHHHHHHhhc------------cCCCcEEEEeCCCHHHHHHHHHHhcccCCCCCceEEEeeeCC
Q 023172 173 FAGAFSFEDGLKLVKLRGAAMQEAAD------------AAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCP 240 (286)
Q Consensus 173 ~aG~ls~~dal~l~~~R~~l~~~~~~------------~~~g~mlaV~~~~~~~~~~~l~~~~~~~~~~~~v~ia~~Nsp 240 (286)
++|.+..+..-++...-+..+.-.|= .-...++.+...+.++++.+|....-. ..+..+-.....
T Consensus 67 vsG~f~~~~P~~~L~~La~~~~l~WY~DG~~Lyvy~~~e~~s~~i~l~~~s~~~l~~~L~~~gl~---D~r~~~r~~~~~ 143 (559)
T PRK15339 67 ISGNFDLHDPNALLEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLNEFNNFLKRSGLY---NKRYPLRGDNRK 143 (559)
T ss_pred EEEEeCCCCHHHHHHHHHHHhCcEEEecCCEEEEEcchheEEEEEecCCCCHHHHHHHHHHcCCc---CCCCceeECCCC
Confidence 57888765555555554544443331 123345666578899999999986543 446677777778
Q ss_pred CCEEEEcCHHHHHHHHHHHH
Q 023172 241 GNYAVSGGVKGIEAVEAKAK 260 (286)
Q Consensus 241 ~~~vvsG~~~~l~~l~~~l~ 260 (286)
+.+.|||++.-++.+.+..+
T Consensus 144 ~~v~VsGPp~yvelV~~~a~ 163 (559)
T PRK15339 144 GTFYVSGPPVYVDLVVNAAT 163 (559)
T ss_pred CEEEEECCHHHHHHHHHHHH
Confidence 88999999988887766555
No 127
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=23.50 E-value=1e+02 Score=29.62 Aligned_cols=19 Identities=26% Similarity=0.058 Sum_probs=15.7
Q ss_pred CccEEEeccHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (286)
..-.++|||||--.|..++
T Consensus 119 ~~VhLIGHSLGAhIAg~ag 137 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAG 137 (442)
T ss_pred CcEEEEEECHHHHHHHHHH
Confidence 5667999999988888765
No 128
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=23.33 E-value=83 Score=27.22 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=23.0
Q ss_pred HHHHHHHccCCCCccCCccEEEeccHHHHHHHHHhc
Q 023172 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (286)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (286)
+.+.+++.| .=|.++|-|+|..-++.++|
T Consensus 95 l~~~i~enG-------PFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 95 LEDYIKENG-------PFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHhC-------CCccccccchhHHHHHHhhc
Confidence 456778888 57999999999876666665
No 129
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=23.31 E-value=60 Score=29.46 Aligned_cols=18 Identities=28% Similarity=0.290 Sum_probs=14.6
Q ss_pred ccEEEeccHHHHHHHHHh
Q 023172 157 VDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 157 p~~v~GhS~GE~aAa~~a 174 (286)
|-.++|||+|-..|+.++
T Consensus 163 ~~~LvGhSmGG~val~~a 180 (349)
T PLN02385 163 PSFLFGQSMGGAVALKVH 180 (349)
T ss_pred CEEEEEeccchHHHHHHH
Confidence 678999999987777654
No 130
>PRK14430 acylphosphatase; Provisional
Probab=23.14 E-value=1.8e+02 Score=21.20 Aligned_cols=26 Identities=23% Similarity=0.152 Sum_probs=20.6
Q ss_pred eeCCC---CEEEEcCHHHHHHHHHHHHhc
Q 023172 237 YLCPG---NYAVSGGVKGIEAVEAKAKSF 262 (286)
Q Consensus 237 ~Nsp~---~~vvsG~~~~l~~l~~~l~~~ 262 (286)
.|.++ .+++.|+.+.|+.|+..|+..
T Consensus 37 rN~~dGsVei~~qG~~~~i~~f~~~l~~g 65 (92)
T PRK14430 37 RNRADGTVEVMASGTVRQLEALRAWMEAG 65 (92)
T ss_pred EECCCCcEEEEEEcCHHHHHHHHHHHHhC
Confidence 45554 467889999999999999653
No 131
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.90 E-value=1.5e+02 Score=26.96 Aligned_cols=84 Identities=13% Similarity=0.128 Sum_probs=46.8
Q ss_pred CccEEEeccHHHHHHHHHhc-------cCCHHHHHHHHHHHHHH-HHHh-hccCCCcEEEEe--CCCHHHHHHHHHHhcc
Q 023172 156 SVDVTCGLSLGEYTALAFAG-------AFSFEDGLKLVKLRGAA-MQEA-ADAAKGAMVSII--GLDSDKVQQLCDAANQ 224 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG-------~ls~~dal~l~~~R~~l-~~~~-~~~~~g~mlaV~--~~~~~~~~~~l~~~~~ 224 (286)
..|.+.|-|.|-+.|+..+. .++.++++++-..++.- +... +. .-..+..+. ..+.+.++++++++..
T Consensus 40 ~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~~~~IF~~~~~~-~~~~~~~~~~~~y~~~~L~~~L~~~fg 118 (329)
T cd07215 40 YFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLERGNYIFKKKIWN-KIKSRGGFLNEKYSHKPLEEVLLEYFG 118 (329)
T ss_pred ccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHhhHhhcccchhh-hhhhhccccccccCcHHHHHHHHHHhC
Confidence 46899999999988876542 47889988876655442 2110 00 000011111 2466778888877653
Q ss_pred cCCC---CCceEEEeeeCC
Q 023172 225 EVDE---DNKVQIANYLCP 240 (286)
Q Consensus 225 ~~~~---~~~v~ia~~Nsp 240 (286)
...- ...+.|.++|-.
T Consensus 119 ~~~l~d~~~~~~i~a~d~~ 137 (329)
T cd07215 119 DTKLSELLKPCLITSYDIE 137 (329)
T ss_pred CCchhhhcCCceEEeeecC
Confidence 3111 124566666543
No 132
>PRK10566 esterase; Provisional
Probab=22.85 E-value=56 Score=27.68 Aligned_cols=18 Identities=33% Similarity=0.331 Sum_probs=14.7
Q ss_pred ccEEEeccHHHHHHHHHh
Q 023172 157 VDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 157 p~~v~GhS~GE~aAa~~a 174 (286)
.-.++|||+|-+.++.++
T Consensus 108 ~i~v~G~S~Gg~~al~~~ 125 (249)
T PRK10566 108 RLAVGGASMGGMTALGIM 125 (249)
T ss_pred ceeEEeecccHHHHHHHH
Confidence 457999999988888664
No 133
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=22.73 E-value=67 Score=28.82 Aligned_cols=18 Identities=28% Similarity=0.292 Sum_probs=14.6
Q ss_pred CccEEEeccHHHHHHHHH
Q 023172 156 SVDVTCGLSLGEYTALAF 173 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~ 173 (286)
.|-.++|||+|-..|+-.
T Consensus 107 ~p~~l~gHSmGg~Ia~~~ 124 (298)
T COG2267 107 LPVFLLGHSMGGLIALLY 124 (298)
T ss_pred CCeEEEEeCcHHHHHHHH
Confidence 688999999997666644
No 134
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=22.24 E-value=1.2e+02 Score=26.18 Aligned_cols=23 Identities=22% Similarity=-0.000 Sum_probs=17.7
Q ss_pred CccEEEeccHHHHHHHHHhccCC
Q 023172 156 SVDVTCGLSLGEYTALAFAGAFS 178 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls 178 (286)
.+-.+.|||+|-.-|.+++-.++
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~ 106 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCD 106 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHcc
Confidence 45678999999888888775544
No 135
>PLN02872 triacylglycerol lipase
Probab=22.21 E-value=1.7e+02 Score=27.45 Aligned_cols=19 Identities=32% Similarity=0.190 Sum_probs=15.5
Q ss_pred CccEEEeccHHHHHHHHHh
Q 023172 156 SVDVTCGLSLGEYTALAFA 174 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (286)
++-.++|||+|-+.++.+.
T Consensus 160 ~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 160 SKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred CceEEEEECHHHHHHHHHh
Confidence 5678999999998887554
No 136
>PF01981 PTH2: Peptidyl-tRNA hydrolase PTH2; InterPro: IPR002833 Peptidyl-tRNA hydrolases are enzymes that release tRNAs from peptidyl-tRNA during translation.; GO: 0004045 aminoacyl-tRNA hydrolase activity; PDB: 1RLK_A 1XTY_C 2ZV3_I 2D3K_A 1WN2_A 1Q7S_A 3ERJ_B 1RZW_A.
Probab=21.85 E-value=3.6e+02 Score=20.35 Aligned_cols=96 Identities=14% Similarity=0.126 Sum_probs=47.6
Q ss_pred CccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHH-HHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhcccCCCCCceEE
Q 023172 156 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRG-AAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQI 234 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~-~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~~~~~~~~~v~i 234 (286)
+.| ++-|.|.++|-|+=+++..-.-+ ..+. ..... |......-+.+..-+.+++.++....... +-...+
T Consensus 9 r~D--L~m~~GKiaAQ~~HAa~~~~~~~---~~~~~~~~~~-W~~~g~~Kivlkv~~e~~L~~l~~~a~~~---gl~~~~ 79 (116)
T PF01981_consen 9 RKD--LKMSKGKIAAQCAHAAVAAYAKL---HEDDPEWLRE-WENNGQKKIVLKVPSEEELLELAKKAKEA---GLPHYL 79 (116)
T ss_dssp ESS--SSS-HHHHHHHHHHHHHHHHHHH---HHHHHHHHHH-HHHTTTSEEEEEESSHHHHHHHHHHHHHT---T-SEEE
T ss_pred ECC--CCCCcchHHHHHHHHHHHHHHHh---hhcCHHHHHH-HhcCCCceEEEEeCCHHHHHHHHHHHHHC---CCCEEE
Confidence 445 37889999999876555433222 1111 22222 32233334455334577888877665321 112334
Q ss_pred EeeeC-----CCC-EEEE---cCHHHHHHHHHHHH
Q 023172 235 ANYLC-----PGN-YAVS---GGVKGIEAVEAKAK 260 (286)
Q Consensus 235 a~~Ns-----p~~-~vvs---G~~~~l~~l~~~l~ 260 (286)
...++ |++ +||+ ++.+.|+.+...|+
T Consensus 80 i~Dag~Tei~pgs~TvlaigP~~~~~i~~it~~Lk 114 (116)
T PF01981_consen 80 IRDAGRTEIPPGSVTVLAIGPAPKEEIDKITGHLK 114 (116)
T ss_dssp EEETSSSSSSTTCEEEEEEEEEEHHHHHHHHTTSE
T ss_pred EEECCCCcCCCCCeEEEEECcCCHHHHHHHhCcCc
Confidence 44433 333 3443 44778887765543
No 137
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=21.82 E-value=53 Score=29.81 Aligned_cols=17 Identities=35% Similarity=0.305 Sum_probs=13.2
Q ss_pred CccEEEeccHHHHHHHH
Q 023172 156 SVDVTCGLSLGEYTALA 172 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~ 172 (286)
.|-.++|||||-..++.
T Consensus 142 ~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 142 LPMYIIGLSMGGNIALR 158 (332)
T ss_pred CceeEeeccCccHHHHH
Confidence 47899999999755543
No 138
>PF09383 NIL: NIL domain; InterPro: IPR018449 This domain is found at the C terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a conserved sequence in some members of the family. ; PDB: 2QRR_A 3CED_A 2QSW_A 3TUZ_D 3TUJ_D 3DHX_B 3TUI_H 3DHW_D.
Probab=21.64 E-value=1.4e+02 Score=20.47 Aligned_cols=22 Identities=18% Similarity=0.145 Sum_probs=18.2
Q ss_pred EEEEcCHHHHHHHHHHHHhcCC
Q 023172 243 YAVSGGVKGIEAVEAKAKSFKA 264 (286)
Q Consensus 243 ~vvsG~~~~l~~l~~~l~~~~~ 264 (286)
+-+.|+.+.+++++++|+++++
T Consensus 50 l~l~g~~~~~~~a~~~L~~~~v 71 (76)
T PF09383_consen 50 LELPGDDEEIEKAIAYLREQGV 71 (76)
T ss_dssp EEEES-HHHHHHHHHHHHHTTE
T ss_pred EEEECCHHHHHHHHHHHHHCCC
Confidence 3467999999999999999886
No 139
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=21.18 E-value=1.2e+02 Score=27.57 Aligned_cols=18 Identities=17% Similarity=0.218 Sum_probs=14.5
Q ss_pred CccEEEeccHHHHHHHHH
Q 023172 156 SVDVTCGLSLGEYTALAF 173 (286)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~ 173 (286)
++-.++|||+|-..++..
T Consensus 136 ~~i~lvGhS~GG~i~~~~ 153 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCY 153 (350)
T ss_pred CcccEEEECHHHHHHHHH
Confidence 577899999998777654
No 140
>PF08026 Antimicrobial_5: Bee antimicrobial peptide; InterPro: IPR012524 This entry represents antimicrobial peptides produced by bees. These peptides have strong antimicrobial and some anti-fungal activity and has homology to abaecin which is the largest proline-rich antimicrobial peptide isolated from European bumblebee Bombus pascuorum [].; GO: 0042381 hemolymph coagulation, 0005576 extracellular region
Probab=20.31 E-value=53 Score=19.46 Aligned_cols=16 Identities=31% Similarity=0.403 Sum_probs=11.5
Q ss_pred cEEEEecCCCCccccc
Q 023172 71 TNAFLFPGQGAQAVGM 86 (286)
Q Consensus 71 ~~~fvF~Gqg~~~~~m 86 (286)
|-.=.|+|||...+..
T Consensus 13 kpFPTFPGqGP~NPKi 28 (39)
T PF08026_consen 13 KPFPTFPGQGPFNPKI 28 (39)
T ss_pred ccCCcCCCCCCCCccc
Confidence 4456799999876654
No 141
>PRK14433 acylphosphatase; Provisional
Probab=20.04 E-value=1.6e+02 Score=21.25 Aligned_cols=26 Identities=8% Similarity=-0.060 Sum_probs=20.4
Q ss_pred eeCCC---CEEEEcCHHHHHHHHHHHHhc
Q 023172 237 YLCPG---NYAVSGGVKGIEAVEAKAKSF 262 (286)
Q Consensus 237 ~Nsp~---~~vvsG~~~~l~~l~~~l~~~ 262 (286)
.|.++ .+++.|+.++|+.+++.|++.
T Consensus 34 ~N~~dG~Vei~~~G~~~~i~~f~~~l~~g 62 (87)
T PRK14433 34 ENLSDGRVEVVAEGPKEALERLLHWLRRG 62 (87)
T ss_pred EECCCCCEEEEEEECHHHHHHHHHHHhhC
Confidence 45453 367899999999999999843
Done!