Query 023174
Match_columns 286
No_of_seqs 158 out of 1985
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 08:59:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023174.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023174hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 7.3E-48 1.6E-52 335.5 21.4 224 46-283 4-228 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 5.8E-46 1.3E-50 334.8 25.2 225 48-283 49-275 (296)
3 PTZ00016 aquaglyceroporin; Pro 100.0 1.5E-44 3.3E-49 326.4 25.5 225 50-282 47-291 (294)
4 PF00230 MIP: Major intrinsic 100.0 5.2E-45 1.1E-49 320.0 20.1 224 46-276 1-227 (227)
5 COG0580 GlpF Glycerol uptake f 100.0 2.8E-44 6.1E-49 312.1 21.4 225 51-281 3-240 (241)
6 PLN00166 aquaporin TIP2; Provi 100.0 7.1E-44 1.5E-48 315.4 23.7 222 48-280 13-236 (250)
7 PRK05420 aquaporin Z; Provisio 100.0 1E-43 2.2E-48 311.5 24.4 221 53-282 2-229 (231)
8 KOG0224 Aquaporin (major intri 100.0 3.2E-45 6.9E-50 321.2 12.7 230 49-285 28-279 (316)
9 PLN00167 aquaporin TIP5; Provi 100.0 2.6E-43 5.6E-48 312.6 24.8 224 48-283 17-242 (256)
10 PLN00026 aquaporin NIP; Provi 100.0 1.9E-43 4.2E-48 317.8 23.4 215 49-280 67-281 (298)
11 PLN00027 aquaporin TIP; Provis 100.0 3.4E-43 7.3E-48 312.0 23.2 222 49-281 16-239 (252)
12 PLN00182 putative aquaporin NI 100.0 7E-43 1.5E-47 313.0 25.1 217 49-281 38-254 (283)
13 PLN00183 putative aquaporin NI 100.0 1.3E-41 2.9E-46 303.7 23.1 218 49-283 41-258 (274)
14 cd00333 MIP Major intrinsic pr 100.0 2.1E-41 4.6E-46 297.3 21.2 220 54-279 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 9.4E-40 2E-44 284.6 19.9 214 58-276 1-216 (216)
16 KOG0223 Aquaporin (major intri 99.8 2E-21 4.4E-26 169.7 5.6 140 10-159 87-228 (238)
17 PLN00182 putative aquaporin NI 99.8 3.6E-20 7.8E-25 166.4 10.8 134 13-157 121-254 (283)
18 PLN00026 aquaporin NIP; Provi 99.8 6.6E-20 1.4E-24 165.4 9.4 131 14-156 151-281 (298)
19 cd00333 MIP Major intrinsic pr 99.8 2.6E-19 5.7E-24 157.2 8.1 137 12-154 79-227 (228)
20 PLN00183 putative aquaporin NI 99.8 5.5E-19 1.2E-23 158.2 10.1 135 13-159 124-258 (274)
21 PLN00184 aquaporin NIP1; Provi 99.8 1.3E-18 2.7E-23 157.4 10.4 136 14-158 134-274 (296)
22 TIGR00861 MIP MIP family chann 99.8 2.1E-18 4.6E-23 150.3 9.2 134 12-151 79-215 (216)
23 PLN00166 aquaporin TIP2; Provi 99.7 2.4E-17 5.1E-22 146.2 12.1 135 13-156 102-236 (250)
24 PRK05420 aquaporin Z; Provisio 99.7 1.1E-17 2.4E-22 146.9 9.8 136 13-157 82-228 (231)
25 PLN00027 aquaporin TIP; Provis 99.7 2.5E-17 5.3E-22 146.5 11.1 136 13-157 104-239 (252)
26 PLN00167 aquaporin TIP5; Provi 99.7 5.3E-17 1.1E-21 144.4 9.2 141 12-162 105-245 (256)
27 PTZ00016 aquaglyceroporin; Pro 99.7 6.3E-17 1.4E-21 146.6 9.1 139 14-159 130-292 (294)
28 PF00230 MIP: Major intrinsic 99.7 1.9E-16 4E-21 139.0 9.1 133 13-152 93-227 (227)
29 COG0580 GlpF Glycerol uptake f 99.6 1.2E-15 2.7E-20 133.1 9.4 136 13-156 87-239 (241)
30 KOG0224 Aquaporin (major intri 99.2 5E-11 1.1E-15 105.8 7.0 96 177-274 31-127 (316)
31 COG2116 FocA Formate/nitrite f 54.0 1.7E+02 0.0036 26.4 15.6 178 93-283 68-260 (265)
32 KOG3415 Putative Rab5-interact 35.4 11 0.00023 29.3 -0.3 24 5-28 36-59 (129)
33 PF04632 FUSC: Fusaric acid re 31.6 5.4E+02 0.012 25.7 15.9 30 127-156 382-411 (650)
34 PF08370 PDR_assoc: Plant PDR 28.5 1E+02 0.0023 21.4 3.7 30 241-273 10-39 (65)
35 PRK11562 nitrite transporter N 28.1 4.5E+02 0.0097 23.7 15.6 104 93-199 62-172 (268)
36 PF03033 Glyco_transf_28: Glyc 27.8 19 0.00042 27.9 -0.1 20 109-128 6-25 (139)
37 PF14034 Spore_YtrH: Sporulati 24.3 1.9E+02 0.0042 22.0 4.7 45 112-156 53-99 (102)
38 COG0730 Predicted permeases [G 24.1 4.8E+02 0.01 22.7 9.1 28 127-154 69-96 (258)
39 PRK09979 putative rho operon l 21.6 38 0.00082 19.5 0.4 16 108-123 4-19 (33)
40 PRK12446 undecaprenyldiphospho 20.1 30 0.00064 32.2 -0.5 22 106-127 6-27 (352)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.3e-48 Score=335.54 Aligned_cols=224 Identities=54% Similarity=0.805 Sum_probs=197.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHH
Q 023174 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (286)
Q Consensus 46 ~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~ 125 (286)
+....+.+|++++||++|++++|.+|+....... .....+.+.+++++|+.++..+++++++||||+|||+|++.++
T Consensus 4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~---~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~ 80 (238)
T KOG0223|consen 4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK---YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAV 80 (238)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHH
Confidence 3456788999999999999999999987765443 2233456788999999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHH-hcccccc
Q 023174 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRS 204 (286)
Q Consensus 126 ~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~-~~~~~~~ 204 (286)
.+++++.+...||++|++|+++|+.+.+.+.+. .....+...+...++.+.+++++.|++.||.|+++++. .+|++++
T Consensus 81 ~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~ 159 (238)
T KOG0223|consen 81 GGKISLFRAVAYIVAQLLGAIAGAALLKVVTPG-QYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS 159 (238)
T ss_pred hCCCcHHHhHHHHHHHHHHHHHHHHHHheecCc-ccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc
Confidence 999999999999999999999999999999944 33333334556778889999999999999999999999 7666654
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhccc
Q 023174 205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAI 283 (286)
Q Consensus 205 ~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~~~ 283 (286)
.+.|+.||+++.+.+++.++.||++|||||+|||+++++ .|+++|+||++|++|+++++++||+++...
T Consensus 160 -------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 160 -------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred -------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 478999999999999999999999999999999999975 499999999999999999999999988765
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=5.8e-46 Score=334.82 Aligned_cols=225 Identities=28% Similarity=0.413 Sum_probs=185.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhc
Q 023174 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR 127 (286)
Q Consensus 48 ~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~ 127 (286)
.+.+++|++++||+|||+|+|++++++...... ....+.+.+++++|+++++.+++++++||+|+|||||+++++.+
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~---~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g 125 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQN---DNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCG 125 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccC---CCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhC
Confidence 355688999999999999999999876543221 11234566788999999999999999999999999999999999
Q ss_pred CCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCc--cceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccC
Q 023174 128 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG--ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (286)
Q Consensus 128 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~ 205 (286)
+++|.+.|+||++|++|+++|+++++.+++.+.....+.. .....+..+..++|+.|+++|++|+++++.+.++++..
T Consensus 126 ~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~ 205 (296)
T PLN00184 126 RFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAI 205 (296)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCC
Confidence 9999999999999999999999999998843221111110 11223345778999999999999999999886654321
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhccc
Q 023174 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAI 283 (286)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~~~ 283 (286)
..+.++.||+.+.+.+++.+++||++|||||||||+++.+ .|+++|+||++|++|+++++++|++++...
T Consensus 206 -----~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~WVy~vgPilGa~laal~y~~l~~~~ 275 (296)
T PLN00184 206 -----GELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIWIYIVAPTLGAIAGAWVYNTVRYTD 275 (296)
T ss_pred -----CcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccchHHhHHHHHHHHHHHHHHHHhcCC
Confidence 2367999999999999999999999999999999999864 689999999999999999999999987543
No 3
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=1.5e-44 Score=326.36 Aligned_cols=225 Identities=28% Similarity=0.384 Sum_probs=185.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCC
Q 023174 50 WSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL 129 (286)
Q Consensus 50 ~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~ 129 (286)
..++|++++||+||++++|+++++..+....+ ...+.+.+++++|+.+++.+++++++||+|+|||||+++++.+++
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~---~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i 123 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVG---NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKF 123 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccC
Confidence 56789999999999999999988765432221 123455678999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCC-------------ccceecCCCCCcchhHHHHHHHHHHHHHHH
Q 023174 130 SLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAG-------------GANVVAHGYTKGDGLGAEIIGTFVLVYTVF 196 (286)
Q Consensus 130 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il 196 (286)
+|.+.+.|+++|++|+++|+++.+.+++ +.+...+. +.....|+.+..++++.|+++|++|+++++
T Consensus 124 ~~~~~~~YiiaQ~lGa~~ga~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~il 202 (294)
T PTZ00016 124 PWKKLPGYFVAQLLGAFVGAACVYGLYY-GFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVIL 202 (294)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999883 32221110 112234566778999999999999999999
Q ss_pred HhccccccCCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhC---CCCCCC----cceecchhhHHHH
Q 023174 197 SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN---KDRGWD----DHWIFWVGPFVGA 269 (286)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~---~~~~w~----~~wvy~v~P~~Ga 269 (286)
.++|++++.. +...|+.||+.+.++.++.+++||++|||||||||+++.. ++..|+ ++|+||++|++|+
T Consensus 203 a~~d~~~~~~----~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa 278 (294)
T PTZ00016 203 AITDPNNCPA----FNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGA 278 (294)
T ss_pred HhccCccCCC----cCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHH
Confidence 9988766432 2357999999999999999999999999999999999852 222443 6899999999999
Q ss_pred HHHHHHHHHHhcc
Q 023174 270 GLAALYHQVVIRA 282 (286)
Q Consensus 270 ~~aa~~~~~~~~~ 282 (286)
++++++|++++.-
T Consensus 279 ~~aally~~ll~~ 291 (294)
T PTZ00016 279 VLGMFLYDKFIPP 291 (294)
T ss_pred HHHHHHHHHHhCC
Confidence 9999999999754
No 4
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=5.2e-45 Score=320.02 Aligned_cols=224 Identities=40% Similarity=0.597 Sum_probs=189.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCC---CCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHH
Q 023174 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK---CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLG 122 (286)
Q Consensus 46 ~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~ 122 (286)
|.++.+++|++++||+||+++++.++++..+......+ +...+...+++++|+.+++.+++++++||+|+|||+|++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 35678899999999999999999998865543332221 122356677889999999999999999999999999999
Q ss_pred HHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhcccc
Q 023174 123 LFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 202 (286)
Q Consensus 123 ~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~ 202 (286)
.++.|+++|++.+.|+++|++|+++|+.+.+.++++ .........+.+.++.+..++++.|+++|++|+++++...+++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~ 159 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPD-SNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDK 159 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTH-HHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccC-cccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccc
Confidence 999999999999999999999999999999999943 3222233345567778889999999999999999999999888
Q ss_pred ccCCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHH
Q 023174 203 RSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 276 (286)
Q Consensus 203 ~~~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~ 276 (286)
+..+. +.+.|+.||+.+....+..++.||++|||||+++|+++.+ .|+++|+||++|++|+++|+++|
T Consensus 160 ~~~~~---~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 160 RKFPL---GPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSSTS---SGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccc---ccccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEEEehHHHHHHHHHhhC
Confidence 76542 2478999999999999999999999999999999999974 49999999999999999999987
No 5
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.8e-44 Score=312.13 Aligned_cols=225 Identities=35% Similarity=0.529 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCc
Q 023174 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (286)
Q Consensus 51 ~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~ 130 (286)
+..|++++||+||++|++.++++.........+....++..+++++|+.+.+.+|+++++||+|+|||||++.++.++++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 34678899999999999999998887776655555667777899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHhccccccccC------CccceecCC-CCCcchhHHHHHHHHHHHHHHHHhccccc
Q 023174 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLA------GGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (286)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~E~~~T~~Lv~~il~~~~~~~ 203 (286)
|++...||++|++|+++|+.+.+.++.+ .+.... .+.....|. .+..++|+.|+++|++|+++++..+++++
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~-~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~ 161 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYG-KILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGN 161 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 9999999999999999999999999843 333222 122233343 46788999999999999999999887554
Q ss_pred cCCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHh---CC---CCCCCcceecchhhHHHHHHHHHHHH
Q 023174 204 SARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIY---NK---DRGWDDHWIFWVGPFVGAGLAALYHQ 277 (286)
Q Consensus 204 ~~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~---~~---~~~w~~~wvy~v~P~~Ga~~aa~~~~ 277 (286)
. + ..+.|+.||+.+..+.++.++.||.++|||||+||++.+ ++ +.+++|.|+||++|++|+++++++|+
T Consensus 162 ~-~----~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~ 236 (241)
T COG0580 162 A-N----AGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYK 236 (241)
T ss_pred c-c----ccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHH
Confidence 4 1 238899999999999999999999999999999999953 21 11226899999999999999999999
Q ss_pred HHhc
Q 023174 278 VVIR 281 (286)
Q Consensus 278 ~~~~ 281 (286)
.++.
T Consensus 237 ~~~~ 240 (241)
T COG0580 237 LLLG 240 (241)
T ss_pred HHcc
Confidence 8764
No 6
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=7.1e-44 Score=315.36 Aligned_cols=222 Identities=36% Similarity=0.586 Sum_probs=184.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhHHhhhc-cccCC-CCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHH
Q 023174 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNT-KCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (286)
Q Consensus 48 ~~~~~~~~~~~E~igT~~lv~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~ 125 (286)
.+.+.+|++++|++||++++++++++.... ...+. .....+.+.+++++|+.+++.+++++++||+|+|||||+++++
T Consensus 13 ~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l 92 (250)
T PLN00166 13 FSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAI 92 (250)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 346678999999999999999999876542 11111 1112245567889999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccC
Q 023174 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (286)
Q Consensus 126 ~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~ 205 (286)
.++++|.+.|+||++|++|+++|+.+++.+++.+... .....++.+..++++.|+++|++|+++++...+++++.
T Consensus 93 ~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~ 167 (250)
T PLN00166 93 GGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVP-----THGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKG 167 (250)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc-----ccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 9999999999999999999999999999887432211 11234456778999999999999999999887655432
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHh
Q 023174 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 280 (286)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~ 280 (286)
. ...+.|+.||+.+..+++..+++||++|||||+|||+++.+ +|+++|+||++|++|+++++++|+.++
T Consensus 168 ~---~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywvgPi~Ga~~aa~~y~~l~ 236 (250)
T PLN00166 168 S---LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWVGPLVGGALAGLIYGDVF 236 (250)
T ss_pred c---cccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 1 12478999999999999999999999999999999999863 699999999999999999999998774
No 7
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=1e-43 Score=311.47 Aligned_cols=221 Identities=30% Similarity=0.549 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccc
Q 023174 53 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLT 132 (286)
Q Consensus 53 ~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~ 132 (286)
+|++++||+||++++|++++......... +...+.+.+++++|+.+.+.+++++++||+|+|||||+++++.++++|+
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~--~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP--ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC--CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHH
Confidence 68899999999999999988654322111 1123456678999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHhcccc-ccccCC-----ccceec-CCCCCcchhHHHHHHHHHHHHHHHHhccccccC
Q 023174 133 RALFYMVMQCLGAICGAGVVKGFMGAGQ-YGRLAG-----GANVVA-HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (286)
Q Consensus 133 ~~~~yi~aQ~lGa~~g~~~~~~~~~~~~-~~~~~~-----~~~~~~-~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~ 205 (286)
+.+.||++|++|+++|+.+.+.+++++. +...+. +..... ...+..++++.|+++|++|+++++...|+++.
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~- 158 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDKRAP- 158 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCC-
Confidence 9999999999999999999998874321 111110 001111 23466889999999999999999998876431
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhcc
Q 023174 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 282 (286)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~~ 282 (286)
+...|+.+|+.+....++.+++||++|||||+|||+++.+ +..|+++|+||++|++|+++++++|+++++.
T Consensus 159 -----~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g-~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 159 -----AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred -----CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhC-CCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 2368999999999999999999999999999999999973 2335689999999999999999999998753
No 8
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-45 Score=321.16 Aligned_cols=230 Identities=29% Similarity=0.425 Sum_probs=195.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcC
Q 023174 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (286)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~ 128 (286)
...+.|++++||+||++|++.+++++++...++.+.. .++.+.+++|+.+++.+++.+.+||||+|||||++.++.||
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g--~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGG--SFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCC--ceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 4568999999999999999999998888877754322 34556788999999999999999999999999999999999
Q ss_pred CccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCcc--------------ceecCCCCCcchhHHHHHHHHHHHHH
Q 023174 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--------------NVVAHGYTKGDGLGAEIIGTFVLVYT 194 (286)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~E~~~T~~Lv~~ 194 (286)
++|.|.++|+++|++||++|++.+|.++ .+.+....++. +.+.|..+.+++|+.|+++|.+|+.+
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y-~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~ 184 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLY-YDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLC 184 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999988 55544433321 22356788999999999999999999
Q ss_pred HHHhccccccCCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHh-----CCCCCC---CcceecchhhH
Q 023174 195 VFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIY-----NKDRGW---DDHWIFWVGPF 266 (286)
Q Consensus 195 il~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~-----~~~~~w---~~~wvy~v~P~ 266 (286)
++.++|++|... +.+.|+.+|+.+.++..+.+.++|..+||||||+||+++ +....+ .+.|+.|++|+
T Consensus 185 l~aI~D~rN~~p----~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl 260 (316)
T KOG0224|consen 185 LFAITDKRNPIP----TGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPL 260 (316)
T ss_pred eeEEecCCCCCC----cchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhh
Confidence 999999987332 368999999999999999999999999999999999983 222222 45689999999
Q ss_pred HHHHHHHHHHHHHhcccCC
Q 023174 267 VGAGLAALYHQVVIRAIPF 285 (286)
Q Consensus 267 ~Ga~~aa~~~~~~~~~~~~ 285 (286)
+|+++++++|.+++..+.+
T Consensus 261 ~Gai~G~~iY~~~Ig~h~~ 279 (316)
T KOG0224|consen 261 IGAILGGWIYDFFIGFHIP 279 (316)
T ss_pred hhhhhhhhhheeeeeccCC
Confidence 9999999999999988765
No 9
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=2.6e-43 Score=312.60 Aligned_cols=224 Identities=30% Similarity=0.467 Sum_probs=186.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhHHhhhccc--cCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHH
Q 023174 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (286)
Q Consensus 48 ~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~ 125 (286)
..++.+|++++||+||++++++++++..+... .+.+....+.+.+++++|+.+++.+++++++||+|+|||||+++++
T Consensus 17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV 96 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 35667899999999999999999987664321 1111122346678999999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccC
Q 023174 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (286)
Q Consensus 126 ~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~ 205 (286)
.++++|++.|+|+++|++|+++|+.+++.++...... .....++.+..++++.|+++|++|+++++...|+++..
T Consensus 97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~ 171 (256)
T PLN00167 97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVP-----TYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGL 171 (256)
T ss_pred hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcccccc-----ccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 9999999999999999999999999998887322111 11222345667899999999999999999988765532
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhccc
Q 023174 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAI 283 (286)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~~~ 283 (286)
.+...|+.+|+.+....++.+++||++|||||+|+|+++.+ .|+++|+||+||++|+++++++|++++...
T Consensus 172 ----~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~ 242 (256)
T PLN00167 172 ----LGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVGPLLGGAVAGLLYDNVVFPT 242 (256)
T ss_pred ----CCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHHHHHHHHHHHHHHHHHhCCC
Confidence 13467999999999999999999999999999999999863 589999999999999999999999988643
No 10
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.9e-43 Score=317.81 Aligned_cols=215 Identities=27% Similarity=0.415 Sum_probs=180.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcC
Q 023174 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (286)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~ 128 (286)
..+++|++++||+|||+|+|++++........ ....+.+.+++++|+++++.+++++++||+|+|||||+++++.++
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~---~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~ 143 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKY---DGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH 143 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence 45678999999999999999998654322111 111245567899999999999999999999999999999999999
Q ss_pred CccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccCCCC
Q 023174 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDS 208 (286)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~ 208 (286)
++|.+.|+||++|++|+++|+++++.++.+. . ..+. ..|+.+..++++.|+++|++|+++++.+.+++++.
T Consensus 144 ~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~-~---~~g~--t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~--- 214 (298)
T PLN00026 144 FPWKHVPAYIAAQVSASICASFALKGVFHPF-M---SGGV--TVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAV--- 214 (298)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c---cCce--eeecccHHHHHHHHHHHHHHHHHhheeeecCCCCc---
Confidence 9999999999999999999999999998431 1 1122 22466788999999999999999999765444321
Q ss_pred CCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHh
Q 023174 209 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 280 (286)
Q Consensus 209 ~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~ 280 (286)
....++.+|+.+.+.+++.+++||++|||||+|+|+++.+ +|+++|+||++|++|+++++++|+.+.
T Consensus 215 --~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~vaPilGAilga~ly~~~~ 281 (298)
T PLN00026 215 --GELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVAPTLGALAGAGTYTAVK 281 (298)
T ss_pred --CCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHHHHHHHHHHHHHHHHHh
Confidence 1256899999999999999999999999999999999853 799999999999999999999999873
No 11
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=3.4e-43 Score=311.98 Aligned_cols=222 Identities=33% Similarity=0.564 Sum_probs=183.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHhhhcc-cc-CCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHh
Q 023174 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVV-KS-NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLA 126 (286)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~ 126 (286)
....+|++++||+||++|+++++++.+... .. +.+....+.+.+++++|+.+++.+++.+++||+|+|||||+++++.
T Consensus 16 ~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~ 95 (252)
T PLN00027 16 HPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIG 95 (252)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHh
Confidence 356789999999999999999998754321 11 1111123455679999999999999999999999999999999999
Q ss_pred cCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccCC
Q 023174 127 RKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSAR 206 (286)
Q Consensus 127 ~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~ 206 (286)
++++|.+.|+|+++|++|+++|+.+++.+.+.... +.....++.+..++++.|+++|++|+++++....++++..
T Consensus 96 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~ 170 (252)
T PLN00027 96 GNITLLRGILYWIAQLLGSVVACLLLKFSTGGLET-----SAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGD 170 (252)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----ccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCC
Confidence 99999999999999999999999999877632111 2223345677899999999999999999998754333221
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhc
Q 023174 207 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 281 (286)
Q Consensus 207 ~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~ 281 (286)
.+...|+.+|+.+..+.++.+++||++|||||+|||+++.+ .|+++|+||++|++|+++++++|++++.
T Consensus 171 ---~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vgP~~Ga~laa~~y~~l~~ 239 (252)
T PLN00027 171 ---LGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAGPLIGGGIAGLVYELIFI 239 (252)
T ss_pred ---ccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 13478999999999999999999999999999999999863 6999999999999999999999999974
No 12
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=7e-43 Score=312.99 Aligned_cols=217 Identities=27% Similarity=0.459 Sum_probs=182.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcC
Q 023174 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (286)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~ 128 (286)
..+++|++++||+|||+|+|+++++.......+ ...+.+.+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~---~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~ 114 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR 114 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC
Confidence 456889999999999999999998765433211 12345667889999999999999999999999999999999999
Q ss_pred CccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccCCCC
Q 023174 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDS 208 (286)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~ 208 (286)
++|.+.+.||++|++|+++|+++++.+++... .+.....|+.+.+++++.|+++|++|+++++.+.++++..
T Consensus 115 ~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~-----~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~--- 186 (283)
T PLN00182 115 FPWYQVPLYIGAQLTGSLLASLTLRLMFNVTP-----EAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAV--- 186 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----cceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccC---
Confidence 99999999999999999999999999883211 1122233455778999999999999999999876544321
Q ss_pred CCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhc
Q 023174 209 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 281 (286)
Q Consensus 209 ~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~ 281 (286)
+...++.+|+.+.+..++.+++||+++||||+|+|+++.+ .|+++|+||++|++|+++++++|+++..
T Consensus 187 --~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 187 --GELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred --CcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 2357899999999999999999999999999999999853 6999999999999999999999998863
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=1.3e-41 Score=303.66 Aligned_cols=218 Identities=27% Similarity=0.406 Sum_probs=182.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcC
Q 023174 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (286)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~ 128 (286)
+.+.+|++++||++||+++|+++++........ ...+.+.+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~---~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~ 117 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSG---GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH 117 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcC
Confidence 456789999999999999999987655432211 12345667889999999999999999999999999999999999
Q ss_pred CccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccCCCC
Q 023174 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDS 208 (286)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~ 208 (286)
++|.+.|+||++|++|+++|+.+++.+++.+. ......|..+..++++.|+++|++|+++++...+++++.
T Consensus 118 i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~------~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~--- 188 (274)
T PLN00183 118 FPWSKVPLYITAQTVGSVLATYVGVSVYGVKA------DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSL--- 188 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCC---
Confidence 99999999999999999999999998884321 111223344567899999999999999999887765321
Q ss_pred CCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhccc
Q 023174 209 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAI 283 (286)
Q Consensus 209 ~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~~~ 283 (286)
....++.+|+.+.+.+++.+++||++|||||+|+|+++. ..|+++|+||++|++|+++++++||+++...
T Consensus 189 --~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~---~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 189 --GHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS---WDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred --CCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC---CChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 235689999999999999999999999999999999985 3799999999999999999999999987543
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=2.1e-41 Score=297.27 Aligned_cols=220 Identities=42% Similarity=0.695 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccch
Q 023174 54 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTR 133 (286)
Q Consensus 54 ~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~ 133 (286)
|++++||+||+++++.++++..+....++ ...+.+.+++++|+.+.+.+++++++||+|+|||+|+++++.++.+|++
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~--~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~ 78 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGG--ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIR 78 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCC--CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHH
Confidence 56899999999999999987665443221 1224556789999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHhccccccccCCc-c-------ceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccC
Q 023174 134 ALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG-A-------NVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (286)
Q Consensus 134 ~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~ 205 (286)
.++|+++|++|+++|+.+++.++++ .++..... . +.+.++.+..++++.|+++|++|+++++...++++..
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~ 157 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYYG-LYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGP 157 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH-HHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccC
Confidence 9999999999999999999998843 32221111 1 2334566788999999999999999999988765431
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHH
Q 023174 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 279 (286)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~ 279 (286)
. .....++.+|+.+....+.++++||+++||||+++++++.+....|+++|+||++|++|+++++++||++
T Consensus 158 ~---~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 158 P---PGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred C---CCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 1 1246799999999999999999999999999999999986422369999999999999999999999874
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=9.4e-40 Score=284.58 Aligned_cols=214 Identities=42% Similarity=0.740 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHhHHhhhccccCC-CCC-CCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhH
Q 023174 58 AEFIATFLFLYISVLTVMGVVKSNT-KCS-TVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAL 135 (286)
Q Consensus 58 ~E~igT~~lv~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~ 135 (286)
+||+||++++++++++.....+... +.. ..+...+++++|+.+...+++++++||+|+|||||+++++.++++|++.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 4999999999999987665332211 111 11456679999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccCCCCCCCchhh
Q 023174 136 FYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP 215 (286)
Q Consensus 136 ~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~~~~~~~~ 215 (286)
+|+++|++|+++|+.+++.++++ .+...........++.+..++++.|+++|++|+++++...+++++... ....+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~---~~~~~ 156 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSG-LFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPR---GGFAP 156 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccc-cccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCC---CccHH
Confidence 99999999999999999988843 321111111122345677899999999999999999988776443221 23689
Q ss_pred HHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHH
Q 023174 216 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 276 (286)
Q Consensus 216 ~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~ 276 (286)
+.+|+.+...++..+++||+++||||+++|+++.+ ...|+++|+||++|++|+++++++|
T Consensus 157 ~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~-~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 157 LAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAG-LAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhc-cccccceeHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999863 3579999999999999999999875
No 16
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.84 E-value=2e-21 Score=169.68 Aligned_cols=140 Identities=21% Similarity=0.163 Sum_probs=113.4
Q ss_pred ccccchhhhhhhhhhhcccccccccCCC--CCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCC
Q 023174 10 LGANKFAERQPIGTAAQTQDGKDYVEPP--PAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV 87 (286)
Q Consensus 10 ~~~~~y~~aq~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~ 87 (286)
.+.--|+.+|++|+++++..+|...+++ ...........+.+..|.++.|++.||.++++++++....+++
T Consensus 87 ~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~------- 159 (238)
T KOG0223|consen 87 FRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS------- 159 (238)
T ss_pred HHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc-------
Confidence 3455699999999999999998888874 1111222223455678999999999999999887643322221
Q ss_pred chhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccc
Q 023174 88 GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (286)
Q Consensus 88 ~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 159 (286)
...++++|+++.+.+++.+++||++||||||+++++..+ .|+++|+||++|++|+++++++++.++.++
T Consensus 160 --~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~-~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 160 --ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG-SWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred --ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc-CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 223899999999999999999999999999999999988 599999999999999999999999998554
No 17
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.82 E-value=3.6e-20 Score=166.42 Aligned_cols=134 Identities=22% Similarity=0.241 Sum_probs=103.1
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (286)
--|+++|++|+++++...+...........+ .....+.+++++.|+++|++|+++++++..... .. +.. .
T Consensus 121 ~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~--~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~---~~----~~~-~ 190 (283)
T PLN00182 121 PLYIGAQLTGSLLASLTLRLMFNVTPEAFFG--TTPTDSSGQALVAEIIISFLLMFVISGVATDSR---AV----GEL-A 190 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccceee--CCCCcchHHHHHHHHHHHHHHHHHHHhheeccc---cC----Ccc-h
Confidence 3699999999999998655444321111111 112235689999999999999998876433211 11 111 3
Q ss_pred HHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhc
Q 023174 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (286)
Q Consensus 93 ~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 157 (286)
++++|+.+++.+++.+++||+|+|||||+++++.++ .|.+.|+||++|++|+++|+++++.+..
T Consensus 191 ~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 191 GIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred hHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999999999865 6899999999999999999999998873
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.81 E-value=6.6e-20 Score=165.44 Aligned_cols=131 Identities=24% Similarity=0.299 Sum_probs=103.6
Q ss_pred chhhhhhhhhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHH
Q 023174 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (286)
Q Consensus 14 ~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (286)
-|+++|++|+++++..++....+.... +. .....+.++.++.||++|++|+++++.+.. +.+. . +.. .+
T Consensus 151 ~YiiaQilGAi~aa~~~~~~~~~~~~~--g~-t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~-~~~~--~----~~~-~~ 219 (298)
T PLN00026 151 AYIAAQVSASICASFALKGVFHPFMSG--GV-TVPSVSTGQAFALEFIITFNLLFVVTAVAT-DTRA--V----GEL-AG 219 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccC--ce-eeecccHHHHHHHHHHHHHHHHHhheeeec-CCCC--c----CCc-cc
Confidence 699999999999999776665442111 11 112346789999999999999998875321 1111 1 111 26
Q ss_pred HHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023174 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (286)
Q Consensus 94 ~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 156 (286)
+++|+.+++.++..+++||+|+|||||+++++..+ +|.+.|+||++|++|+++|+++++.+.
T Consensus 220 l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~~~~~wVy~vaPilGAilga~ly~~~~ 281 (298)
T PLN00026 220 IAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-NYRAIWIYLVAPTLGALAGAGTYTAVK 281 (298)
T ss_pred hHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-CchheeHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999987 899999999999999999999998875
No 19
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.78 E-value=2.6e-19 Score=157.21 Aligned_cols=137 Identities=22% Similarity=0.129 Sum_probs=103.2
Q ss_pred ccchhhhhhhhhhhcccccccccCCCCCCC----------CCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccC
Q 023174 12 ANKFAERQPIGTAAQTQDGKDYVEPPPAPL----------FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSN 81 (286)
Q Consensus 12 ~~~y~~aq~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~ 81 (286)
.--|+.+|++|+++++...+....++.... .......+.+.+|.++.|+++|+++++.++.........
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~- 157 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGP- 157 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccC-
Confidence 346999999999999886444333211100 001112345678999999999999999988754321110
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCC--ccchhHHHHHHHhHHHHHHHHHHHH
Q 023174 82 TKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL--SLTRALFYMVMQCLGAICGAGVVKG 154 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~--~~~~~~~yi~aQ~lGa~~g~~~~~~ 154 (286)
......++++|+.+....+..+++||+|+||||++++++.++. +|++.|+||++|++|+++|+++++.
T Consensus 158 -----~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 158 -----PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred -----CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 0111247899999999999999999999999999999999987 7999999999999999999998764
No 20
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.78 E-value=5.5e-19 Score=158.21 Aligned_cols=135 Identities=23% Similarity=0.272 Sum_probs=103.8
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (286)
--|+.+|++|+++++...+........ ... . ....+.+++++.|+++|+++++.++++..... + . +.. .
T Consensus 124 ~~Yi~aQ~lGa~~ga~l~~~~~~~~~~-~~~-~-~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~-~--~----~~~-~ 192 (274)
T PLN00183 124 PLYITAQTVGSVLATYVGVSVYGVKAD-LMT-T-KPAQGCSSAFWVEFIATFIVMFLAASLTSQPQ-S--L----GHL-S 192 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcc-ccc-C-CCcccHHHHHHHHHHHHHHHHHhhheeecccc-C--C----CCc-e
Confidence 369999999999998875554443221 111 1 11224578999999999999998876543221 1 1 111 2
Q ss_pred HHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccc
Q 023174 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (286)
Q Consensus 93 ~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 159 (286)
++.+|+.+.+.+++.+++||+|+|||||+++++.+. +|.+.|+||++|++|+++++.+++.++.++
T Consensus 193 ~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~-~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 193 GFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSW-DFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred ehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCC-ChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 678999999999999999999999999999999974 899999999999999999999999998544
No 21
>PLN00184 aquaporin NIP1; Provisional
Probab=99.77 E-value=1.3e-18 Score=157.39 Aligned_cols=136 Identities=23% Similarity=0.235 Sum_probs=102.4
Q ss_pred chhhhhhhhhhhcccccccccCCCCC---CCCC--CCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCc
Q 023174 14 KFAERQPIGTAAQTQDGKDYVEPPPA---PLFE--PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG 88 (286)
Q Consensus 14 ~y~~aq~~g~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~ 88 (286)
-|+++|++|+++++..++........ .... .......+.+++++.|+++|++|+++++++..... .. +
T Consensus 134 ~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~---~~----~ 206 (296)
T PLN00184 134 AYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNR---AI----G 206 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCc---CC----C
Confidence 69999999999998765443321110 0000 00111236789999999999999998876532211 10 1
Q ss_pred hhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcc
Q 023174 89 IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (286)
Q Consensus 89 ~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 158 (286)
. ..++++|+++....+..+++||+++||||++++++... .|+++|+||++|++|+++|+++++.+..+
T Consensus 207 ~-~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~-~~~~~WVy~vgPilGa~laal~y~~l~~~ 274 (296)
T PLN00184 207 E-LAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG-CYKGIWIYIVAPTLGAIAGAWVYNTVRYT 274 (296)
T ss_pred c-chHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh-cccccchHHhHHHHHHHHHHHHHHHHhcC
Confidence 1 12789999999999999999999999999999999865 68899999999999999999999988743
No 22
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.76 E-value=2.1e-18 Score=150.26 Aligned_cols=134 Identities=22% Similarity=0.164 Sum_probs=100.5
Q ss_pred ccchhhhhhhhhhhcccccccccCCCCC-C-CCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCch
Q 023174 12 ANKFAERQPIGTAAQTQDGKDYVEPPPA-P-LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGI 89 (286)
Q Consensus 12 ~~~y~~aq~~g~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~ 89 (286)
.--|+.+|++|+++++...+....+... + ........+.+.++.++.|+++|++++++++.+... ++.... +.
T Consensus 79 ~~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~--~~~~~~---~~ 153 (216)
T TIGR00861 79 VPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDP--RNRVPR---GG 153 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecC--CCCCCC---Cc
Confidence 3469999999999998865554443211 1 111111223467899999999999999988764332 111010 11
Q ss_pred hHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhc-CCccchhHHHHHHHhHHHHHHHHH
Q 023174 90 QGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-KLSLTRALFYMVMQCLGAICGAGV 151 (286)
Q Consensus 90 ~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~-~~~~~~~~~yi~aQ~lGa~~g~~~ 151 (286)
..++.+|+.+....+..+++||+|+||||++++++.+ ..+|++.|+||++|++|+++++.+
T Consensus 154 -~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 154 -FAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred -cHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHh
Confidence 2489999999999999999999999999999999986 478999999999999999999875
No 23
>PLN00166 aquaporin TIP2; Provisional
Probab=99.73 E-value=2.4e-17 Score=146.24 Aligned_cols=135 Identities=16% Similarity=0.148 Sum_probs=103.7
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (286)
=-|+.+|++|+++++...+....++.....+. ..+.+..|.++.|+++|++|+++++......+ . ... .. ..
T Consensus 102 ~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~-~-~~~---~~-~~ 173 (250)
T PLN00166 102 FFYWIAQCLGSIVACLLLVFVTNGESVPTHGV--AAGLGAIEGVVMEIVVTFALVYTVYATAADPK-K-GSL---GT-IA 173 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCccccc--CCCCcHHHHHHHHHHHHHHHHHHHHHhccccc-c-ccc---cc-ch
Confidence 36999999999999987665544322111111 12345689999999999999998876432111 1 000 11 23
Q ss_pred HHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023174 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (286)
Q Consensus 93 ~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 156 (286)
++++|+.++..++..++.||+++||||++++++..+ .|.+.|+||++|++|+++++++++.++
T Consensus 174 p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~-~~~~~wvywvgPi~Ga~~aa~~y~~l~ 236 (250)
T PLN00166 174 PIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-DFSQIWIYWVGPLVGGALAGLIYGDVF 236 (250)
T ss_pred hHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC-CCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999976 699999999999999999999998876
No 24
>PRK05420 aquaporin Z; Provisional
Probab=99.73 E-value=1.1e-17 Score=146.85 Aligned_cols=136 Identities=17% Similarity=0.189 Sum_probs=101.9
Q ss_pred cchhhhhhhhhhhcccccccccCCCCC-C---------CCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCC
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPA-P---------LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNT 82 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~ 82 (286)
=.|+++|++|+++++..++....++.. + ..........+..+.++.|+++|++|+++++.+... +. .
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~--~~-~ 158 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDK--RA-P 158 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCC--CC-C
Confidence 369999999999999765544332110 0 001111223457899999999999999988765321 11 1
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcC-CccchhHHHHHHHhHHHHHHHHHHHHHhc
Q 023174 83 KCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK-LSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (286)
Q Consensus 83 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~-~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 157 (286)
. + ..++.+|+.+....+..++.||+.+||||++++++..+ ..+.++|+||++|++|+++++.+++.++.
T Consensus 159 ~----~--~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~ 228 (231)
T PRK05420 159 A----G--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLE 228 (231)
T ss_pred C----c--chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhc
Confidence 1 1 23789999999999999999999999999999999853 34568999999999999999999988873
No 25
>PLN00027 aquaporin TIP; Provisional
Probab=99.72 E-value=2.5e-17 Score=146.49 Aligned_cols=136 Identities=18% Similarity=0.138 Sum_probs=103.1
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (286)
--|+.+|++|+++++...+............. ....+.++.++.|+++|++|+++++......+ +.. .+. ..
T Consensus 104 ~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~-~~~----~~~-~~ 175 (252)
T PLN00027 104 ILYWIAQLLGSVVACLLLKFSTGGLETSAFSL--SSGVGVWNAFVFEIVMTFGLVYTVYATAVDPK-KGD----LGI-IA 175 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccC--CCCccHHHHHHHHHHHHHHHHHHHHHhccccc-cCC----ccc-hH
Confidence 36999999999999886543332211111111 12345789999999999999998865432211 111 111 23
Q ss_pred HHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhc
Q 023174 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (286)
Q Consensus 93 ~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 157 (286)
++.+|+.+....+..++.||+.+||||++++++... .|..+|+||++|++|+++++.+++.++.
T Consensus 176 p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~~ 239 (252)
T PLN00027 176 PIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTNHWVYWAGPLIGGGIAGLVYELIFI 239 (252)
T ss_pred HHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh-cchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999999999999999976 6899999999999999999999999874
No 26
>PLN00167 aquaporin TIP5; Provisional
Probab=99.70 E-value=5.3e-17 Score=144.39 Aligned_cols=141 Identities=18% Similarity=0.120 Sum_probs=105.4
Q ss_pred ccchhhhhhhhhhhcccccccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhH
Q 023174 12 ANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (286)
Q Consensus 12 ~~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (286)
.--|+.+|++|+++++...+....+...+.... ....+.++.++.|+++|+++++.++.... .+.. .. .. .
T Consensus 105 ~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~--~~~~s~~~~~~~E~i~T~~L~~~i~~~~~--~~~~-~~---~~-~ 175 (256)
T PLN00167 105 AMFYWISQMLASVMACLFLKVTTVGQHVPTYKI--AEEMTGFGASVLEGVLTFGLVYTVYAAGD--PRRG-LL---GA-I 175 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccccccccc--CcccchHHHHHHHHHHHHHHHHHHHHhcc--cccc-CC---CC-c
Confidence 347999999999999887655543321111111 11234578899999999999998765432 1111 11 11 1
Q ss_pred HHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcccccc
Q 023174 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYG 162 (286)
Q Consensus 92 ~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~ 162 (286)
.++.+|+.+....+..++.||+.+||||++++.+..+ +|++.|+||++|++|+++++.+++.++.++..+
T Consensus 176 ~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~-~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~~ 245 (256)
T PLN00167 176 GPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG-SFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDD 245 (256)
T ss_pred chHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc-CccCcEEEeHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 2788999999999999999999999999999999865 688999999999999999999999988655443
No 27
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.69 E-value=6.3e-17 Score=146.64 Aligned_cols=139 Identities=18% Similarity=0.121 Sum_probs=100.5
Q ss_pred chhhhhhhhhhhcccccccccCCC---C-----------CCCCCC-CCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhcc
Q 023174 14 KFAERQPIGTAAQTQDGKDYVEPP---P-----------APLFEP-GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVV 78 (286)
Q Consensus 14 ~y~~aq~~g~~~~~~~~~~~~~~~---~-----------~~~~~~-~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~ 78 (286)
-|+++|++|+++++...+....+. . ....+. ......+..+.++.|+++|++|+++++.+.. .
T Consensus 130 ~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d--~ 207 (294)
T PTZ00016 130 GYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITD--P 207 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhcc--C
Confidence 699999999999988654432210 0 000000 0111345689999999999999998876532 2
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhc-----CCccc----hhHHHHHHHhHHHHHHH
Q 023174 79 KSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-----KLSLT----RALFYMVMQCLGAICGA 149 (286)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~-----~~~~~----~~~~yi~aQ~lGa~~g~ 149 (286)
++.... + ..++++|+.+.+..+..++.||+.+||||++++++.. +..|. +.|+||++|++|+++|+
T Consensus 208 ~~~~~~---~--~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aa 282 (294)
T PTZ00016 208 NNCPAF---N--YLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGM 282 (294)
T ss_pred ccCCCc---C--cccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHH
Confidence 211111 1 1278899999888999999999999999999999984 33454 58999999999999999
Q ss_pred HHHHHHhccc
Q 023174 150 GVVKGFMGAG 159 (286)
Q Consensus 150 ~~~~~~~~~~ 159 (286)
++++.+.+++
T Consensus 283 lly~~ll~~~ 292 (294)
T PTZ00016 283 FLYDKFIPPL 292 (294)
T ss_pred HHHHHHhCCC
Confidence 9999888543
No 28
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.67 E-value=1.9e-16 Score=138.97 Aligned_cols=133 Identities=23% Similarity=0.198 Sum_probs=100.1
Q ss_pred cchhhhhhhhhhhcccccccccCCC--CCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchh
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPP--PAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQ 90 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 90 (286)
-.|+++|++|+++++...+...++. .............+..+.+..|+++|+++++++.......+.. . .+.+
T Consensus 93 ~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~--~---~~~~ 167 (227)
T PF00230_consen 93 IVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKF--P---LGPL 167 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSS--T---SSGG
T ss_pred eeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccccc--c---cccc
Confidence 3599999999999998765555542 1112222223345678999999999999999877644322111 1 1112
Q ss_pred HHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHH
Q 023174 91 GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 152 (286)
Q Consensus 91 ~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~ 152 (286)
.++.+|+.+.+..+..++.||+.+||||++++.+.... |.+.|+||++|++|+++|++++
T Consensus 168 -~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 168 -APLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred -cceeEEEEEeecccccccccccccCchhhcCceeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 37889999999999899999999999999999999874 9999999999999999999875
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.63 E-value=1.2e-15 Score=133.12 Aligned_cols=136 Identities=21% Similarity=0.155 Sum_probs=99.7
Q ss_pred cchhhhhhhhhhhcccccccccCC-------CCCCCCCC--CCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCC
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEP-------PPAPLFEP--GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK 83 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~ 83 (286)
=.|+++|.+|+++++..+.....+ +....++. ..+...+..+.++.|+++||+|++.+.+... ..+ .
T Consensus 87 ~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~--~~~-~- 162 (241)
T COG0580 87 LPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTD--DGN-A- 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhc--cCc-c-
Confidence 469999999999998743222221 11112222 2233346789999999999999998876432 111 0
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHh----cCCc----cchhHHHHHHHhHHHHHHHHHHHHH
Q 023174 84 CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLA----RKLS----LTRALFYMVMQCLGAICGAGVVKGF 155 (286)
Q Consensus 84 ~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~----~~~~----~~~~~~yi~aQ~lGa~~g~~~~~~~ 155 (286)
+.+ ..++.+|+.++.+.+..++.||..+||||++++.+. +... .++.|+||++|++|+++|+.+++.+
T Consensus 163 --~~~--~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~ 238 (241)
T COG0580 163 --NAG--FAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLL 238 (241)
T ss_pred --ccc--chHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHH
Confidence 111 228999999999999999999999999999999994 2111 2579999999999999999999976
Q ss_pred h
Q 023174 156 M 156 (286)
Q Consensus 156 ~ 156 (286)
+
T Consensus 239 ~ 239 (241)
T COG0580 239 L 239 (241)
T ss_pred c
Confidence 6
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.17 E-value=5e-11 Score=105.81 Aligned_cols=96 Identities=29% Similarity=0.338 Sum_probs=79.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHhccccccCCCCC-CCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCC
Q 023174 177 KGDGLGAEIIGTFVLVYTVFSATDAKRSARDSH-VPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW 255 (286)
Q Consensus 177 ~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w 255 (286)
..|.++.||++|++|++.-+++..+..-.+... ...-..+.+|+++.+.+++.+.+||+++|||.+++..++ ++..|
T Consensus 31 l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~--g~~p~ 108 (316)
T KOG0224|consen 31 LLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCIL--GRLPW 108 (316)
T ss_pred HHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHh--cCCCh
Confidence 467899999999999998777655433221111 123456789999999999999999999999999999998 66899
Q ss_pred CcceecchhhHHHHHHHHH
Q 023174 256 DDHWIFWVGPFVGAGLAAL 274 (286)
Q Consensus 256 ~~~wvy~v~P~~Ga~~aa~ 274 (286)
.++.+|.++|++||++++.
T Consensus 109 ~k~p~Y~~aQ~iGAF~gaa 127 (316)
T KOG0224|consen 109 KKFPVYVLAQFIGAFLGAA 127 (316)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999974
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=53.99 E-value=1.7e+02 Score=26.39 Aligned_cols=178 Identities=20% Similarity=0.194 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHhhcCc-cccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccc--
Q 023174 93 AWAFGGMIFVLVYCTAGI-SGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAN-- 169 (286)
Q Consensus 93 ~~~~g~~v~~~~~~~~~~-sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~-- 169 (286)
++.+++.+.+.+++-+.. || |---.......++++|++.+--|+--.+|=++|+++...++.-........+..
T Consensus 68 ~~~F~~GLilVv~~g~ELfT~---n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~ 144 (265)
T COG2116 68 GLVFSLGLILVVIAGSELFTS---NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGL 144 (265)
T ss_pred HHHHHHHHHHhhhhCcccccc---chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHH
Confidence 455555555555544432 21 333344455568889999888888888888888877666551111111111111
Q ss_pred ---eec---CCCCCcchhHHHHHHHHHHHHHHHHhccccccCCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhH
Q 023174 170 ---VVA---HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 243 (286)
Q Consensus 170 ---~~~---~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~ 243 (286)
... -+.+..+.|.--.++.++..+.++..-..|... -..+.+-+.+++-+ .....=...|=. .+
T Consensus 145 ~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~~~-------~K~~~m~~pv~~Fv--~~GfeH~VANm~-~i 214 (265)
T COG2116 145 FVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKDGA-------AKIFAIILPVMLFV--ASGFEHSVANMF-MI 214 (265)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccchh-------hHHHHHHHHHHHHH--HcCCceeeehHH-HH
Confidence 001 123446777777888888888777654322211 12233333333332 333333455522 22
Q ss_pred HHHHHhCCCCCCCc-ceecc----hhhHHH-HHHHHHHHHHHhccc
Q 023174 244 GAAIIYNKDRGWDD-HWIFW----VGPFVG-AGLAALYHQVVIRAI 283 (286)
Q Consensus 244 g~~~~~~~~~~w~~-~wvy~----v~P~~G-a~~aa~~~~~~~~~~ 283 (286)
.+..+..+..+|.+ .|--+ +|-++| +++-++.|.++++..
T Consensus 215 ~~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~ 260 (265)
T COG2116 215 PWAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQ 260 (265)
T ss_pred HHHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcccc
Confidence 23333334456665 32222 344443 444567777777654
No 32
>KOG3415 consensus Putative Rab5-interacting protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.43 E-value=11 Score=29.29 Aligned_cols=24 Identities=21% Similarity=0.058 Sum_probs=21.6
Q ss_pred cccccccccchhhhhhhhhhhccc
Q 023174 5 EEDVRLGANKFAERQPIGTAAQTQ 28 (286)
Q Consensus 5 ~~~~~~~~~~y~~aq~~g~~~~~~ 28 (286)
+|++++.|--||.+|++|-+++..
T Consensus 36 ~DKdellDViyW~rQVi~l~lGvi 59 (129)
T KOG3415|consen 36 PDKDELLDVIYWIRQVIGLILGVI 59 (129)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999988765
No 33
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=31.58 E-value=5.4e+02 Score=25.72 Aligned_cols=30 Identities=10% Similarity=0.023 Sum_probs=25.7
Q ss_pred cCCccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023174 127 RKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (286)
Q Consensus 127 ~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 156 (286)
...+......++.+.++|+++|.+..+.++
T Consensus 382 ~~~P~~~~~~~~~G~l~~~~~a~~~~~~vl 411 (650)
T PF04632_consen 382 LDNPAPALRLFLIGALLGAVLAFLYLFFVL 411 (650)
T ss_pred CcChHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344677888999999999999999999888
No 34
>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].
Probab=28.53 E-value=1e+02 Score=21.42 Aligned_cols=30 Identities=30% Similarity=0.619 Sum_probs=18.1
Q ss_pred hhHHHHHHhCCCCCCCcceecchhhHHHHHHHH
Q 023174 241 RSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAA 273 (286)
Q Consensus 241 r~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa 273 (286)
.++|-++....+..-+. +-||++ +|++++-
T Consensus 10 ~tlG~~vL~~rG~~~~~-~WyWIg--vgaL~G~ 39 (65)
T PF08370_consen 10 STLGVAVLKSRGLFTES-YWYWIG--VGALLGF 39 (65)
T ss_pred CcHHHHHHHHcCCCCCC-cEEeeh--HHHHHHH
Confidence 68888887532223333 448875 6777774
No 35
>PRK11562 nitrite transporter NirC; Provisional
Probab=28.09 E-value=4.5e+02 Score=23.66 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhhcC-ccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccc-c-ccccCCcc-
Q 023174 93 AWAFGGMIFVLVYCTAG-ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG-Q-YGRLAGGA- 168 (286)
Q Consensus 93 ~~~~g~~v~~~~~~~~~-~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-~-~~~~~~~~- 168 (286)
+..+++.+.+.++.-+. .|| |=....-..+.++.+|.+..--|.-=.+|=++|++++..++... . ........
T Consensus 62 g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~ 138 (268)
T PRK11562 62 GATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (268)
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 44444444444443333 222 43334456667888888887777777777777777665544111 0 11000000
Q ss_pred ceec---CCCCCcchhHHHHHHHHHHHHHHHHhc
Q 023174 169 NVVA---HGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (286)
Q Consensus 169 ~~~~---~~~~~~~~~~~E~~~T~~Lv~~il~~~ 199 (286)
.... .+.+..+.|+-=.++.++..+.++...
T Consensus 139 ~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~ 172 (268)
T PRK11562 139 HSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAI 172 (268)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 123456777777888888888777554
No 36
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=27.84 E-value=19 Score=27.94 Aligned_cols=20 Identities=35% Similarity=0.590 Sum_probs=17.3
Q ss_pred CccccccChHHHHHHHHhcC
Q 023174 109 GISGGHINPAVTLGLFLARK 128 (286)
Q Consensus 109 ~~sGah~NPavtl~~~~~~~ 128 (286)
.=|+||+||.+.++-.+.++
T Consensus 6 ~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHhcc
Confidence 34789999999999999965
No 37
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=24.29 E-value=1.9e+02 Score=22.04 Aligned_cols=45 Identities=18% Similarity=0.301 Sum_probs=37.6
Q ss_pred ccccChHHHHHHHHhcCC--ccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023174 112 GGHINPAVTLGLFLARKL--SLTRALFYMVMQCLGAICGAGVVKGFM 156 (286)
Q Consensus 112 Gah~NPavtl~~~~~~~~--~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 156 (286)
|+.++|-+.+-.-+.++. +..|..+|+++-++|+-.|..+++++.
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~ 99 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLT 99 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 578888888888665432 467899999999999999999999876
No 38
>COG0730 Predicted permeases [General function prediction only]
Probab=24.11 E-value=4.8e+02 Score=22.68 Aligned_cols=28 Identities=21% Similarity=0.209 Sum_probs=23.2
Q ss_pred cCCccchhHHHHHHHhHHHHHHHHHHHH
Q 023174 127 RKLSLTRALFYMVMQCLGAICGAGVVKG 154 (286)
Q Consensus 127 ~~~~~~~~~~yi~aQ~lGa~~g~~~~~~ 154 (286)
++.+|+.......+=++|+++|+.+...
T Consensus 69 ~~v~~~~~~~l~~~~~~G~~lG~~l~~~ 96 (258)
T COG0730 69 GNVDWKLALILLLGALIGAFLGALLALL 96 (258)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5668999999999999999999666554
No 39
>PRK09979 putative rho operon leader peptide; Provisional
Probab=21.60 E-value=38 Score=19.47 Aligned_cols=16 Identities=31% Similarity=0.571 Sum_probs=12.1
Q ss_pred cCccccccChHHHHHH
Q 023174 108 AGISGGHINPAVTLGL 123 (286)
Q Consensus 108 ~~~sGah~NPavtl~~ 123 (286)
-.+||.++||..-+..
T Consensus 4 eqisgsslnpscrfss 19 (33)
T PRK09979 4 EQISGSSLNPSCRFSS 19 (33)
T ss_pred ccccCCcCCccccccc
Confidence 3589999999876543
No 40
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=20.11 E-value=30 Score=32.24 Aligned_cols=22 Identities=32% Similarity=0.576 Sum_probs=18.3
Q ss_pred hhcCccccccChHHHHHHHHhc
Q 023174 106 CTAGISGGHINPAVTLGLFLAR 127 (286)
Q Consensus 106 ~~~~~sGah~NPavtl~~~~~~ 127 (286)
+.+.=||||+.||++++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 3456689999999999998874
Done!