Query 023174
Match_columns 286
No_of_seqs 158 out of 1985
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 17:35:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023174.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023174hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cn5_A Aquaporin; membrane pro 100.0 2.2E-53 7.4E-58 383.7 18.3 254 30-284 38-291 (304)
2 3iyz_A Aquaporin-4; water tran 100.0 8.5E-49 2.9E-53 355.8 23.5 224 48-281 47-270 (340)
3 3gd8_A Aquaporin-4; proton exc 100.0 5.5E-49 1.9E-53 342.0 21.3 221 51-281 2-222 (223)
4 3llq_A Aquaporin Z 2; aquapori 100.0 7.1E-49 2.4E-53 346.3 19.7 222 50-280 27-253 (256)
5 1j4n_A Aquaporin 1; membrane p 100.0 4.3E-48 1.5E-52 345.4 24.4 230 45-283 3-236 (271)
6 2b6o_A Aquaporin-0, lens fiber 100.0 1.7E-47 5.8E-52 340.2 25.1 222 46-281 3-224 (263)
7 2zz9_A Aquaporin-4; water tran 100.0 5.7E-48 1.9E-52 347.6 22.0 226 46-281 6-231 (301)
8 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 1.2E-47 4E-52 341.3 19.8 222 46-281 5-227 (266)
9 2f2b_A Aquaporin AQPM; protein 100.0 3.8E-47 1.3E-51 335.5 20.8 226 51-281 3-245 (246)
10 2o9g_A Aquaporin Z; integral m 100.0 3E-47 1E-51 333.6 19.7 222 52-282 4-232 (234)
11 2w2e_A AQY1, aquaporin, aquapo 100.0 1.4E-46 4.9E-51 336.2 22.8 221 50-282 42-266 (279)
12 1ldf_A Glycerol uptake facilit 100.0 3.7E-47 1.3E-51 341.3 18.8 226 51-283 6-258 (281)
13 3c02_A Aquaglyceroporin; membr 100.0 8.8E-47 3E-51 335.1 16.6 225 51-282 8-244 (258)
14 2f2b_A Aquaporin AQPM; protein 99.8 4.3E-21 1.5E-25 168.9 8.9 137 12-156 100-244 (246)
15 2o9g_A Aquaporin Z; integral m 99.8 1.8E-19 6.2E-24 157.3 9.6 138 12-158 84-232 (234)
16 2b6o_A Aquaporin-0, lens fiber 99.8 3.7E-19 1.3E-23 157.9 11.3 138 13-158 87-225 (263)
17 3llq_A Aquaporin Z 2; aquapori 99.8 3.3E-19 1.1E-23 157.0 8.5 135 13-156 110-253 (256)
18 3iyz_A Aquaporin-4; water tran 99.8 7E-19 2.4E-23 159.7 10.5 139 13-159 133-272 (340)
19 3d9s_A Aquaporin-5, AQP-5; aqu 99.8 4E-19 1.4E-23 157.7 8.6 138 13-158 89-228 (266)
20 2w2e_A AQY1, aquaporin, aquapo 99.8 7.9E-19 2.7E-23 156.7 10.2 134 13-157 131-265 (279)
21 2zz9_A Aquaporin-4; water tran 99.8 7E-19 2.4E-23 158.2 9.5 139 12-158 93-232 (301)
22 3gd8_A Aquaporin-4; proton exc 99.8 4.5E-19 1.5E-23 153.7 7.8 136 13-156 85-221 (223)
23 1j4n_A Aquaporin 1; membrane p 99.8 8.7E-19 3E-23 156.1 8.6 138 13-158 97-235 (271)
24 3cn5_A Aquaporin; membrane pro 99.7 6E-19 2.1E-23 159.0 5.3 144 13-159 143-290 (304)
25 1ldf_A Glycerol uptake facilit 99.7 1.2E-17 4.2E-22 149.5 6.3 141 12-158 86-257 (281)
26 3c02_A Aquaglyceroporin; membr 99.7 1.7E-17 5.8E-22 146.8 6.3 141 12-157 88-243 (258)
27 3kcu_A Probable formate transp 52.2 1.2E+02 0.004 26.3 12.9 104 93-200 72-184 (285)
28 3s2u_A UDP-N-acetylglucosamine 26.1 8.7 0.0003 34.3 -1.4 21 108-128 9-29 (365)
29 3tds_E Formate/nitrite transpo 23.9 3.4E+02 0.012 23.1 12.0 103 93-199 68-178 (268)
No 1
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=2.2e-53 Score=383.73 Aligned_cols=254 Identities=76% Similarity=1.325 Sum_probs=205.1
Q ss_pred cccccCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcC
Q 023174 30 GKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAG 109 (286)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~ 109 (286)
.|++.+|++.+..+.++..+++++|++++||+||++|+++++++.++.....++....+.+.+++++|+.+++.++++++
T Consensus 38 ~~~~~~~~~~~~~~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~ 117 (304)
T 3cn5_A 38 GKDYVDPPPAPFFDLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAG 117 (304)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCccCCCcccccCccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeec
Confidence 37777776666677788889999999999999999999999988776543333334556788899999999999999999
Q ss_pred ccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHH
Q 023174 110 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTF 189 (286)
Q Consensus 110 ~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ 189 (286)
+||+|+|||||++.++.++++|.+.+.|+++|++|+++|+.+++.++ ++.++..+.+.+.+.++++..++++.|+++||
T Consensus 118 iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~-~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf 196 (304)
T 3cn5_A 118 ISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFM-KGPYNQFGGGANSVALGYNKGTALGAEIIGTF 196 (304)
T ss_dssp TTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccCcccccCCCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 44454444444445667788999999999999
Q ss_pred HHHHHHHHhccccccCCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHH
Q 023174 190 VLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGA 269 (286)
Q Consensus 190 ~Lv~~il~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga 269 (286)
+|+++++.++|+++..+.++.+.+.|+.||+.+.++.++.+++||++|||||||||+++++++..|+++|+||++|++|+
T Consensus 197 iLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa 276 (304)
T 3cn5_A 197 VLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGA 276 (304)
T ss_dssp HHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHH
Confidence 99999998888765543322345889999999999999999999999999999999999654458999999999999999
Q ss_pred HHHHHHHHHHhcccC
Q 023174 270 GLAALYHQVVIRAIP 284 (286)
Q Consensus 270 ~~aa~~~~~~~~~~~ 284 (286)
++|+++|++++...+
T Consensus 277 ~laa~~y~~l~~~~~ 291 (304)
T 3cn5_A 277 AVAAAYHQYVLRAAA 291 (304)
T ss_dssp HHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHhCCCC
Confidence 999999999887554
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=8.5e-49 Score=355.79 Aligned_cols=224 Identities=40% Similarity=0.663 Sum_probs=191.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhc
Q 023174 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR 127 (286)
Q Consensus 48 ~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~ 127 (286)
...+++|++++||+|||+|++++++++++. ...++....+++.+++++|+++++.+++++++||||+|||||++.++.+
T Consensus 47 ~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~-~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G 125 (340)
T 3iyz_A 47 WTQAFWKAVTAEFLAMLIFVLLSVGSTINW-GGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR 125 (340)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcC
Confidence 345789999999999999999999887754 2222233456778899999999999999999999999999999999999
Q ss_pred CCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccCCC
Q 023174 128 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARD 207 (286)
Q Consensus 128 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~ 207 (286)
+++|.+.+.|+++|++|+++|+.+++.+++ +.... ..+.+.+.++.+..++|+.|+++||+|+++++.+.|+++...
T Consensus 126 ~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~-~~~~~-~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~- 202 (340)
T 3iyz_A 126 KISIAKSVFYITAQCLGAIIGAGILYLVTP-PSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDV- 202 (340)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhcC-ceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCc-
Confidence 999999999999999999999999999883 33211 123344556778899999999999999999999988765422
Q ss_pred CCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhc
Q 023174 208 SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 281 (286)
Q Consensus 208 ~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~ 281 (286)
....|+.||+++.+..+.+++.||++|||||+|||+++.+ .|+++|+||+||++|+++|+++|++++.
T Consensus 203 ---~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywvgPiiGailaallY~~l~~ 270 (340)
T 3iyz_A 203 ---TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFC 270 (340)
T ss_pred ---ccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhHHHHHHHHHHHHHHHHHhC
Confidence 2467999999998888888899999999999999999863 6999999999999999999999998875
No 3
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-49 Score=342.04 Aligned_cols=221 Identities=40% Similarity=0.678 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCc
Q 023174 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (286)
Q Consensus 51 ~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~ 130 (286)
+++|++++||+||++|++.+++++.+. ...++....+.+.+++++|+.+++.+++++++||+|+|||||++.++.++++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~-~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 80 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINW-GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 80 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCT-TTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCC
Confidence 468999999999999999999877654 2222333456788899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccCCCCCC
Q 023174 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 210 (286)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~~~ 210 (286)
|++.+.|+++|++|+++|+.+.+.+++ ++... ..+.+.+.++.+..++++.|+++||+|+++++...|++++..
T Consensus 81 ~~~~~~Yi~AQ~lGA~~ga~lv~~~~~-~~~~~-~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~---- 154 (223)
T 3gd8_A 81 IAKSVFYIAAQCLGAIIGAGILYLVTP-PSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDV---- 154 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSC-HHHHT-TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc-ccccc-ceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCc----
Confidence 999999999999999999999999883 33211 123344566778889999999999999999999988765432
Q ss_pred CchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhc
Q 023174 211 PILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 281 (286)
Q Consensus 211 ~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~ 281 (286)
....|+.||+.+.......++.||++|||||||||+++.+ +|+++|+||++|++|+++++++|++++.
T Consensus 155 ~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 155 TGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 2467999999998777777789999999999999999974 6999999999999999999999998763
No 4
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=7.1e-49 Score=346.34 Aligned_cols=222 Identities=30% Similarity=0.505 Sum_probs=184.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCC
Q 023174 50 WSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL 129 (286)
Q Consensus 50 ~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~ 129 (286)
.+++|++++||+||++|+++++++.......+ ....+++.+++++|+++++.+++++++||+|+|||||++.++.+++
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~--~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 104 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP--ELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRF 104 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT--TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCC
Confidence 34689999999999999999998765332221 2345678889999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHhHHHHHHHHHHHHHhcc-ccccccCC---ccceec-CCCCCcchhHHHHHHHHHHHHHHHHhcccccc
Q 023174 130 SLTRALFYMVMQCLGAICGAGVVKGFMGA-GQYGRLAG---GANVVA-HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 204 (286)
Q Consensus 130 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~-~~~~~~~~---~~~~~~-~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~ 204 (286)
+|.+.+.|+++|++|+++|+.+++.+++. ..++..+. +..... ...+..++++.|+++||+|+++++.++|+++.
T Consensus 105 ~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~~ 184 (256)
T 3llq_A 105 PASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVP 184 (256)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHSTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999998832 22322111 111112 24677889999999999999999998876532
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHh
Q 023174 205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 280 (286)
Q Consensus 205 ~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~ 280 (286)
+.+.|+.||+.+..+.+..++.||++|||||||||+++.+ +..|+++|+||++|++|+++|+++|+++.
T Consensus 185 ------~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 185 ------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 2478999999999999999999999999999999999873 33577999999999999999999999885
No 5
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=4.3e-48 Score=345.42 Aligned_cols=230 Identities=43% Similarity=0.720 Sum_probs=193.1
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhcccc----CCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHH
Q 023174 45 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS----NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVT 120 (286)
Q Consensus 45 ~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavt 120 (286)
+|.++.+++|++++||+||++|++.++++..+.... .......+.+.+++++|+++++.+++++++||+|+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 355677889999999999999999999877654321 1122223567889999999999999999999999999999
Q ss_pred HHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhcc
Q 023174 121 LGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 200 (286)
Q Consensus 121 l~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~ 200 (286)
++.++.++++|.+.+.|+++|++|+++|+.+++.++.+.. . ...+.+...++.+..++++.|+++|++|+++++.+.|
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d 160 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLP-D-NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD 160 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCT-T-CCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCc-c-cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999983221 1 1122334556778899999999999999999999887
Q ss_pred ccccCCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHh
Q 023174 201 AKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 280 (286)
Q Consensus 201 ~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~ 280 (286)
+++... +.+.|+.||+.+....+.+++.||++|||||||||+++.+ .|+++|+||++|++|+++|+++|++++
T Consensus 161 ~~~~~~----~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP~~Ga~la~~~y~~~~ 233 (271)
T 1j4n_A 161 RRRRDL----GGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGPFIGAALAVLIYDFIL 233 (271)
T ss_dssp SSCCCC----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCc----cccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHHHHHHHHHHHHHHHHh
Confidence 655321 3478999999999888887889999999999999999863 799999999999999999999999987
Q ss_pred ccc
Q 023174 281 RAI 283 (286)
Q Consensus 281 ~~~ 283 (286)
...
T Consensus 234 ~~~ 236 (271)
T 1j4n_A 234 APR 236 (271)
T ss_dssp SCC
T ss_pred CCC
Confidence 643
No 6
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.7e-47 Score=340.18 Aligned_cols=222 Identities=35% Similarity=0.593 Sum_probs=190.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHH
Q 023174 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (286)
Q Consensus 46 ~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~ 125 (286)
|.++.+++|++++||+||++|+++++++.... +....+.+.+++++|+++++.++.++++||+|+|||||+++++
T Consensus 3 e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~-----~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~ 77 (263)
T 2b6o_A 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLV 77 (263)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-----CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHH
Confidence 45667889999999999999999998876432 1123356778999999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccC
Q 023174 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (286)
Q Consensus 126 ~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~ 205 (286)
.++++|.+.+.|+++|++|+++|+.+++.++++ .... ..+.+.+.++.+..++++.|+++||+|+++++.+.|+++..
T Consensus 78 ~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~-~~~~-~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 155 (263)
T 2b6o_A 78 GSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPP-AVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNG 155 (263)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCT-TTCS-SCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc-cccc-ccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 999999999999999999999999999999943 3221 12334455677889999999999999999999998765532
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhc
Q 023174 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 281 (286)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~ 281 (286)
. ..+.|+.||+.+....+..+++||++|||||||||+++.+ +|+++|+||++|++|+++|+++|++++.
T Consensus 156 ~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~Ga~la~~~y~~l~~ 224 (263)
T 2b6o_A 156 R----LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAGLGSLLYDFLLF 224 (263)
T ss_dssp S----CCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred C----cccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 3478999999999999999999999999999999999864 7999999999999999999999998865
No 7
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=5.7e-48 Score=347.63 Aligned_cols=226 Identities=40% Similarity=0.653 Sum_probs=191.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHH
Q 023174 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (286)
Q Consensus 46 ~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~ 125 (286)
+..+.+++|++++||+||++|+++++++.++...+ .+....+.+.+++++|+++++.+++++++||||+|||||++.++
T Consensus 6 ~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~-~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 84 (301)
T 2zz9_A 6 GVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-ENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVC 84 (301)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC--CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-CCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHH
Confidence 34456789999999999999999999876654322 22334567788999999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccC
Q 023174 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (286)
Q Consensus 126 ~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~ 205 (286)
.++++|.+.+.|+++|++|+++|+.+++.+++++ .. .+.+.+.+.++.+..++++.|+++||+|+++++.+.|+++..
T Consensus 85 ~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~-~~-~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~ 162 (301)
T 2zz9_A 85 TRKISIAKSVFYITAQCLGAIIGAGILYLVTPPS-VV-GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 162 (301)
T ss_dssp TSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSC-GG-GTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSC
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cc-CceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999999999999999998432 21 122334455677888999999999999999999988776532
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhc
Q 023174 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 281 (286)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~ 281 (286)
. +.+.|+.||+.+.+..+.+++.||++|||||+|||+++.+ .|+++|+||++|++|+++|+++|++++.
T Consensus 163 ~----~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiGailaa~ly~~l~~ 231 (301)
T 2zz9_A 163 V----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFC 231 (301)
T ss_dssp C----SSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred c----cchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHHHHHHHHHHHHHhC
Confidence 1 3478999999998888888899999999999999999963 6999999999999999999999998865
No 8
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=341.32 Aligned_cols=222 Identities=39% Similarity=0.609 Sum_probs=190.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHH
Q 023174 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (286)
Q Consensus 46 ~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~ 125 (286)
|.++.+++|++++||+||++|++.++++..... ....+.+.+++++|+++++.+++++++||+|+|||||++.++
T Consensus 5 e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~-----~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 79 (266)
T 3d9s_A 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP-----SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLV 79 (266)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCS-----SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHH
Confidence 445677899999999999999999998765311 122467788999999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccC
Q 023174 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (286)
Q Consensus 126 ~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~ 205 (286)
.++++|.+.+.|+++|++|+++|+.+++.+++ +... ...+.+.+.++.+..++++.|+++||+|+++++.+.|+++..
T Consensus 80 ~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~-~~~~-~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 157 (266)
T 3d9s_A 80 GNQISLLRAFFYVAAQLVGAIAGAGILYGVAP-LNAR-GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 157 (266)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSC-HHHH-TTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcc-cccc-CceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 99999999999999999999999999999994 3221 122233444567788999999999999999999998766542
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCc-ceecchhhHHHHHHHHHHHHHHhc
Q 023174 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDD-HWIFWVGPFVGAGLAALYHQVVIR 281 (286)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~-~wvy~v~P~~Ga~~aa~~~~~~~~ 281 (286)
. +.+.|+.||+.+....+.++++||++|||||||||+++.+ .|++ +|+||++|++|+++|+++|++++.
T Consensus 158 ~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~ 227 (266)
T 3d9s_A 158 P----VGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVGAVLAAILYFYLLF 227 (266)
T ss_dssp C----CCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred c----cchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHHHHHHHHHHHHHhC
Confidence 2 2478999999999999999999999999999999999874 7988 999999999999999999999875
No 9
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=3.8e-47 Score=335.49 Aligned_cols=226 Identities=31% Similarity=0.422 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhcc-ccCC--------CC-----CCCchhHHHHHHHHHHHHHHHhhcCccccccC
Q 023174 51 SFYRAGIAEFIATFLFLYISVLTVMGVV-KSNT--------KC-----STVGIQGIAWAFGGMIFVLVYCTAGISGGHIN 116 (286)
Q Consensus 51 ~~~~~~~~E~igT~~lv~~~~~~~~~~~-~~~~--------~~-----~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~N 116 (286)
+++|++++||+||++|++.++++..... .+++ .. ...+++.+++++|+.+++.+++++++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 3689999999999999999998766543 1111 01 11234558999999999999999999999999
Q ss_pred hHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHH
Q 023174 117 PAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF 196 (286)
Q Consensus 117 Pavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il 196 (286)
||||++.++.|+++|++.+.|+++|++|+++|+.+.+.+++++.....+-+.+.+.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999995532222222233344567888999999999999999999
Q ss_pred HhccccccCCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHH--Hh-CCCCCCCcceecchhhHHHHHHHH
Q 023174 197 SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI--IY-NKDRGWDDHWIFWVGPFVGAGLAA 273 (286)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~--~~-~~~~~w~~~wvy~v~P~~Ga~~aa 273 (286)
...++++.. +.+.|+.+|+.+...+++.++.||+++||||||||++ .. +++.+|++.|+||++|++|+++++
T Consensus 163 ~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa 237 (246)
T 2f2b_A 163 GIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAA 237 (246)
T ss_dssp HHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHH
T ss_pred EEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHH
Confidence 876654432 2478999999999999999999999999999999999 33 456789999999999999999999
Q ss_pred HHHHHHhc
Q 023174 274 LYHQVVIR 281 (286)
Q Consensus 274 ~~~~~~~~ 281 (286)
++|+++++
T Consensus 238 ~~y~~l~~ 245 (246)
T 2f2b_A 238 LTYQYLTS 245 (246)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHcC
Confidence 99998864
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=3e-47 Score=333.58 Aligned_cols=222 Identities=28% Similarity=0.491 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCcc
Q 023174 52 FYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSL 131 (286)
Q Consensus 52 ~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~ 131 (286)
++|++++||+||++|++.++++....... ++...+.+.+++++|+.+++.+++++++||+|+|||||++.++.++++|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~--~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGF--PELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTC--TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCC--CCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCH
Confidence 57899999999999999998865422211 1223467788999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHhccc-ccccc-----CCccceec-CCCCCcchhHHHHHHHHHHHHHHHHhcccccc
Q 023174 132 TRALFYMVMQCLGAICGAGVVKGFMGAG-QYGRL-----AGGANVVA-HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 204 (286)
Q Consensus 132 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-~~~~~-----~~~~~~~~-~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~ 204 (286)
++.+.|+++|++|+++|+.+.+.++++. +++.. ..+..... .+.+..++++.|+++|++|+++++.++|+++.
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~ 161 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAP 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHTSTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9999999999999999999999998432 22221 01111112 24677899999999999999999998875321
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhcc
Q 023174 205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 282 (286)
Q Consensus 205 ~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~~ 282 (286)
+.+.|+.||+.+..+.+..++.||++|||||||||+++++ +..|+++|+||++|++|+++++++|+++++.
T Consensus 162 ------~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g-~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 162 ------AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQG-GWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-SHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ------cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhC-CCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 2478999999999999999999999999999999999973 3457799999999999999999999998753
No 11
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1.4e-46 Score=336.23 Aligned_cols=221 Identities=33% Similarity=0.515 Sum_probs=185.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHhh--hccc--cCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHH
Q 023174 50 WSFYRAGIAEFIATFLFLYISVLTVM--GVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (286)
Q Consensus 50 ~~~~~~~~~E~igT~~lv~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~ 125 (286)
.+.+|++++||+||++|++.++++.. +... .+......+.+.+++++|+++++.+++++++||+|+|||||++.++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 35689999999999999999887532 1111 1112223356778999999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccC
Q 023174 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (286)
Q Consensus 126 ~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~ 205 (286)
.++++|.+.+.|+++|++|+++|+.+++.+++ +... ..+.+.++.+..++++.|+++||+|+++++...++++..
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~-~~~~----~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~ 196 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMTP-GEIA----FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRA 196 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSC-SSCC----CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcc-ccce----eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 99999999999999999999999999999983 3321 123344466778999999999999999999987655431
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhCCCCCCCcceecchhhHHHHHHHHHHHHHHhcc
Q 023174 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 282 (286)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~~~~~w~~~wvy~v~P~~Ga~~aa~~~~~~~~~ 282 (286)
+.+.|+.||+.+.++.++.++.||++|||||||||+++.+ ..|+++|+||++|++|+++|+++|++++..
T Consensus 197 -----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~--~~~~~~WVy~vgPiiGa~la~~ly~~l~~~ 266 (279)
T 2w2e_A 197 -----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR--SFPNYHWIYWLGPILGAFLAYSIWQMWKWL 266 (279)
T ss_dssp -----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT--CCCTTTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc--cchhhhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3478999999999999999999999999999999999974 345789999999999999999999998754
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=3.7e-47 Score=341.35 Aligned_cols=226 Identities=27% Similarity=0.381 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCc
Q 023174 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (286)
Q Consensus 51 ~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~ 130 (286)
+++|++++||+||++|++.+++++.+...++. ..+.+.+++++|+++++.+++++++||+|+|||||++.++.++++
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~---~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 82 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGA---SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFD 82 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---CCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCC
Confidence 46899999999999999999987765544432 234455799999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHhcccccccc-----------------CCccceecCCCCCcchhHHHHHHHHHHHH
Q 023174 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRL-----------------AGGANVVAHGYTKGDGLGAEIIGTFVLVY 193 (286)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~ 193 (286)
|.+.+.|+++|++|+++|+.+.+.+++ +.++.. +-..+.+.++.+..++++.|+++||+|++
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~ 161 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYY-NLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMG 161 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999983 322110 00122234456788999999999999999
Q ss_pred HHHHhccccccCCCCCCCchhhHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhC----CCC------CCCcceecch
Q 023174 194 TVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN----KDR------GWDDHWIFWV 263 (286)
Q Consensus 194 ~il~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~----~~~------~w~~~wvy~v 263 (286)
+++.+.|+++... .+.+.|+.||+.+..+.++.++.||++|||||||||++++. ++. +|.++|+||+
T Consensus 162 ~il~~~d~~~~~~---~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~v 238 (281)
T 1ldf_A 162 LILALTDDGNGVP---RGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLF 238 (281)
T ss_dssp HHHHHHCTTSSSC---CGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHH
T ss_pred HHHHHhccCCCCc---ccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhH
Confidence 9999988765321 13589999999999999999999999999999999999851 112 2338999999
Q ss_pred hhHHHHHHHHHHHHHHhccc
Q 023174 264 GPFVGAGLAALYHQVVIRAI 283 (286)
Q Consensus 264 ~P~~Ga~~aa~~~~~~~~~~ 283 (286)
+|++|+++|+++|+++++.+
T Consensus 239 gPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 239 GPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp HHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHHHHhCcc
Confidence 99999999999999998654
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=8.8e-47 Score=335.06 Aligned_cols=225 Identities=23% Similarity=0.342 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCc
Q 023174 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (286)
Q Consensus 51 ~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~ 130 (286)
+++|++++||+||++|++.++++..+...++ ...+.+.+++++|+.+++.+++++++||+|+|||||++.++.++++
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~---~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 84 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTG---LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFD 84 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCC---CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCc
Confidence 4689999999999999999998766543221 1346778899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHhccccccccCC----ccceecCCCCCcchhHHHHHHHHHHHHHHHHhccccccCC
Q 023174 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAG----GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSAR 206 (286)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~ 206 (286)
|++.+.|+++|++|+++|+.+.+.++ +++++.... +......+.+..++++.|+++|++|+++++.++|+++...
T Consensus 85 ~~~~~~Yi~AQ~lGa~~ga~l~~~~~-~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~ 163 (258)
T 3c02_A 85 LKKIPVYFFAQLLGAFVGTSTVYGLY-HGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGK 163 (258)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHT-HHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-chhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCc
Confidence 99999999999999999999999998 433332211 1111222344456999999999999999999988765321
Q ss_pred CCCCCchh-hHHHHHHHHHHHHHhhCCCCCccchHhhHHHHHHhC---CCCCC----CcceecchhhHHHHHHHHHHHHH
Q 023174 207 DSHVPILA-PLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN---KDRGW----DDHWIFWVGPFVGAGLAALYHQV 278 (286)
Q Consensus 207 ~~~~~~~~-~~~igl~v~~~~~~~~~~sG~~lNPAr~~g~~~~~~---~~~~w----~~~wvy~v~P~~Ga~~aa~~~~~ 278 (286)
.+.+. |+.||+.+..+.++.++.||++|||||||||+++++ ++..| +++|+||++|++|+++++++|++
T Consensus 164 ---~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~ 240 (258)
T 3c02_A 164 ---FHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDK 240 (258)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHH
Confidence 13477 999999999999999999999999999999999862 22345 67999999999999999999998
Q ss_pred Hhcc
Q 023174 279 VIRA 282 (286)
Q Consensus 279 ~~~~ 282 (286)
++..
T Consensus 241 ~~~~ 244 (258)
T 3c02_A 241 VICP 244 (258)
T ss_dssp THHH
T ss_pred Hhcc
Confidence 8754
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.84 E-value=4.3e-21 Score=168.94 Aligned_cols=137 Identities=18% Similarity=0.141 Sum_probs=105.4
Q ss_pred ccchhhhhhhhhhhcccccccccCCCC--CCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCc
Q 023174 12 ANKFAERQPIGTAAQTQDGKDYVEPPP--APLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG 88 (286)
Q Consensus 12 ~~~y~~aq~~g~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~ 88 (286)
.-.|+++|++|+++++...+...+++. ....+...+ ...+..|.++.|+++|++|++++++.....+.. .
T Consensus 100 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~-------~ 172 (246)
T 2f2b_A 100 VVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAP-------K 172 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC-------T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheeeEEecCCCCC-------C
Confidence 346999999999999997766655411 111122222 234568999999999999999987653321111 1
Q ss_pred hhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHH-----hcCCccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023174 89 IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL-----ARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (286)
Q Consensus 89 ~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~-----~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 156 (286)
. ..++++|+.+...++..+++||+|+|||||+++++ .++..|.+.|+||++|++|+++|+++++.++
T Consensus 173 ~-~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~ 244 (246)
T 2f2b_A 173 G-FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLT 244 (246)
T ss_dssp T-CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred c-eeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHc
Confidence 1 23899999999999999999999999999999999 3456788999999999999999999998876
No 15
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.79 E-value=1.8e-19 Score=157.34 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=104.5
Q ss_pred ccchhhhhhhhhhhcccccccccCCCC----------CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccC
Q 023174 12 ANKFAERQPIGTAAQTQDGKDYVEPPP----------APLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSN 81 (286)
Q Consensus 12 ~~~y~~aq~~g~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~ 81 (286)
.-.|+++|++|+++++...+...++.. ....+...+...+..+.++.|+++|++|+++++... +++.
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~--d~~~- 160 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT--DKFA- 160 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHT--STTS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhc--CCCC-
Confidence 346999999999999987554443211 011111122244578999999999999999887643 2111
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcC-CccchhHHHHHHHhHHHHHHHHHHHHHhcc
Q 023174 82 TKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK-LSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (286)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~-~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 158 (286)
. . + ..++.+|+.+....+..++.||+.+||||++++.+..+ ..|.++|+||++|++|+++|+++++.++.+
T Consensus 161 ~--~--~--~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 161 P--A--G--FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp C--T--T--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred c--c--c--hHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 1 1 1 23889999999999999999999999999999999853 457799999999999999999999988743
No 16
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.79 E-value=3.7e-19 Score=157.85 Aligned_cols=138 Identities=20% Similarity=0.157 Sum_probs=107.0
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (286)
-.|+++|++|+++++...+...+++.....+.... ...+..+.++.|+++||+|+++++.+. +.++... . + +
T Consensus 87 ~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~--d~~~~~~-~--~-~- 159 (263)
T 2b6o_A 87 ICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATY--DERRNGR-L--G-S- 159 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS--CTTSCSS-C--C-C-
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHh--cccCCCC-c--c-c-
Confidence 36999999999999997766665432222232222 233568899999999999999987642 2111111 1 1 1
Q ss_pred HHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcc
Q 023174 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (286)
Q Consensus 92 ~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 158 (286)
.++.+|+.+.+..+..++.||+.+||||++++.+..+ .|.++|+||++|++|+++|+++++.++.+
T Consensus 160 ~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 225 (263)
T 2b6o_A 160 VALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR-NFTNHWVYWVGPVIGAGLGSLLYDFLLFP 225 (263)
T ss_dssp HHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT-CCTTCTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC-CccceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3788999999999999999999999999999999876 89999999999999999999999988743
No 17
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=3.3e-19 Score=157.02 Aligned_cols=135 Identities=16% Similarity=0.133 Sum_probs=101.8
Q ss_pred cchhhhhhhhhhhcccccccccCCCC--C------CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCC
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPP--A------PLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKC 84 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~ 84 (286)
-.|+++|++|+++++..++...++.. . ...+...+...+..+.++.|+++||+|+++++.+.. .+..
T Consensus 110 ~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d--~~~~--- 184 (256)
T 3llq_A 110 VPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTH--GRVP--- 184 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHS--TTSC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcC--CCCC---
Confidence 36999999999999987654432110 0 011111222346788999999999999998876432 1111
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhc-CCccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023174 85 STVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-KLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (286)
Q Consensus 85 ~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~-~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 156 (286)
. . ..++.+|+.+.+..+..++.||+.+||||++++.+.. +..|.+.|+||++|++|+++|+++++.+.
T Consensus 185 ~---~-~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 185 A---G-FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp T---T-CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred c---c-chhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 1 1 1388999999999999999999999999999999874 44577999999999999999999999876
No 18
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.77 E-value=7e-19 Score=159.72 Aligned_cols=139 Identities=14% Similarity=0.120 Sum_probs=104.6
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (286)
-.|+++|++|+++++..++...++.....++.... ...+..+.++.|+++||+|+++++.+... ++... ...
T Consensus 133 ~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~--~~~~~----~~~- 205 (340)
T 3iyz_A 133 VFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDD--KRTDV----TGS- 205 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcC--ccCCc----ccc-
Confidence 35999999999999997666554332111222111 23456889999999999999998764321 11110 111
Q ss_pred HHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccc
Q 023174 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (286)
Q Consensus 92 ~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 159 (286)
.++++|+++.+.....++.||+.+||||++++.+... .|.+.|+||++|++|+++|+++++.++.++
T Consensus 206 ~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~w~~~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 206 VALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred hhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-CCCcEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 2788888887777777799999999999999999876 799999999999999999999999888543
No 19
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.77 E-value=4e-19 Score=157.68 Aligned_cols=138 Identities=15% Similarity=0.096 Sum_probs=105.2
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (286)
-.|+++|++|+++++...+...+++.....+...+ ...+..+.++.|+++||+|+++++.+. +.++... . + .
T Consensus 89 ~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~--d~~~~~~-~--~-~- 161 (266)
T 3d9s_A 89 FFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAST--DSRRTSP-V--G-S- 161 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH--CTTCCSC-C--C-C-
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHh--cccCCCc-c--c-h-
Confidence 36999999999999997666554211111222222 233568899999999999999988753 2211111 1 1 1
Q ss_pred HHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccch-hHHHHHHHhHHHHHHHHHHHHHhcc
Q 023174 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTR-ALFYMVMQCLGAICGAGVVKGFMGA 158 (286)
Q Consensus 92 ~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~-~~~yi~aQ~lGa~~g~~~~~~~~~~ 158 (286)
.++.+|+.+.+..+..++.||+.+||||++++.+..+ .|.+ +|+||++|++|+++|+++++.++.+
T Consensus 162 ~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 228 (266)
T 3d9s_A 162 PALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSPAHWVFWVGPIVGAVLAAILYFYLLFP 228 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCCTTHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-CcccCEeeeehHHHHHHHHHHHHHHHHhCC
Confidence 3788999998888999999999999999999999876 8898 9999999999999999999998744
No 20
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.77 E-value=7.9e-19 Score=156.71 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=104.7
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (286)
-.|+++|++|+++++..++...+++.. . . ..+ ...+..+.++.|+++||+|+++++........ . ..+
T Consensus 131 ~~YiiAQ~lGA~~ga~lv~~~~~~~~~-~-~-t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~----~---~~~- 199 (279)
T 2w2e_A 131 ILMAFTQIVAGMAAAGAASAMTPGEIA-F-A-NALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR----A---TWF- 199 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSSCC-C-S-CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST----T---GGG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccce-e-e-ccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC----C---cCc-
Confidence 359999999999999987666654321 1 1 111 13456789999999999999998765322111 1 112
Q ss_pred HHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhc
Q 023174 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (286)
Q Consensus 92 ~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 157 (286)
.++.+|+.+++..+..++.||+.+||||++++++..+.-+..+|+||++|++|+++|+++++.+..
T Consensus 200 ~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~ 265 (279)
T 2w2e_A 200 APFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKW 265 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 388999999999999999999999999999999998644568999999999999999999998873
No 21
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.77 E-value=7e-19 Score=158.24 Aligned_cols=139 Identities=15% Similarity=0.149 Sum_probs=105.0
Q ss_pred ccchhhhhhhhhhhcccccccccCCCCCCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchh
Q 023174 12 ANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQ 90 (286)
Q Consensus 12 ~~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 90 (286)
.-.|+++|++|+++++..++...++......+.... ...+..+.++.|+++||+|+++++.+. +.++... . +
T Consensus 93 ~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~--d~~~~~~-~--~-- 165 (301)
T 2zz9_A 93 SVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASC--DDKRTDV-T--G-- 165 (301)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHS--CSSSSCC-S--S--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhc--CCCCCCc-c--c--
Confidence 346999999999999998766665432212222221 234568899999999999999987643 1111110 1 1
Q ss_pred HHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcc
Q 023174 91 GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (286)
Q Consensus 91 ~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 158 (286)
..++++|+.+.+.....++.||+.+||||++++++..+ .|.++|+||++|++|+++|+++++.++.+
T Consensus 166 ~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~-~w~~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 166 SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-CCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred hHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC-CCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 13788899888777777799999999999999999976 79999999999999999999999988743
No 22
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.77 E-value=4.5e-19 Score=153.71 Aligned_cols=136 Identities=17% Similarity=0.170 Sum_probs=100.8
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (286)
-.|+++|++|+++++...+...+++.....+.... ...+..+.++.|+++||+|+++++.... .++... . + .
T Consensus 85 ~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~--~~~~~~-~--~-~- 157 (223)
T 3gd8_A 85 VFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCD--SKRTDV-T--G-S- 157 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTC--TTCSCC-C--S-C-
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhc--cccCCc-c--C-C-
Confidence 35999999999999987655443211111111111 2335678999999999999998876432 111111 1 1 1
Q ss_pred HHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023174 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (286)
Q Consensus 92 ~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 156 (286)
.++.+|+.+.+.....++.||+.+||||++++.+..+ .|.++|+||++|++|+++|+++++.++
T Consensus 158 ~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~-~w~~~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 158 IALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT-CCTTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc-CCCcEEeehhHHHHHHHHHHHHHHHHc
Confidence 2788888887777777789999999999999999976 799999999999999999999998876
No 23
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.76 E-value=8.7e-19 Score=156.07 Aligned_cols=138 Identities=15% Similarity=0.089 Sum_probs=103.2
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchhH
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (286)
-.|+++|++|+++++..++...++......+.... ...+..+.++.|+++|++|+++++... +.++... ..+
T Consensus 97 ~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~--d~~~~~~----~~~- 169 (271)
T 1j4n_A 97 IMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATT--DRRRRDL----GGS- 169 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHT--CSSCCCC----CSC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhc--cccCCCc----ccc-
Confidence 36999999999999997766554322222222222 123346778999999999999887643 2211110 111
Q ss_pred HHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcc
Q 023174 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (286)
Q Consensus 92 ~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 158 (286)
.++.+|+.+.+.....++.||+.+||||++++.+..+ .|.++|+||++|++|+++|+++++.++.+
T Consensus 170 ~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~-~~~~~wv~~vgP~~Ga~la~~~y~~~~~~ 235 (271)
T 1j4n_A 170 GPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH-NFQDHWIFWVGPFIGAALAVLIYDFILAP 235 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT-CCTTTTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC-CCcceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3788999988777777789999999999999999876 79999999999999999999999988743
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.75 E-value=6e-19 Score=158.98 Aligned_cols=144 Identities=21% Similarity=0.206 Sum_probs=104.3
Q ss_pred cchhhhhhhhhhhcccccccccCCCCCC-CCCCCCC-cchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCCchh
Q 023174 13 NKFAERQPIGTAAQTQDGKDYVEPPPAP-LFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQ 90 (286)
Q Consensus 13 ~~y~~aq~~g~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 90 (286)
-.|+++|++|+++++..++...++.... ..+.... ...+..+.++.|+++||+|+++++... +.++.........+
T Consensus 143 ~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~--d~~~~~~~~~~~~l 220 (304)
T 3cn5_A 143 LVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSAT--DPKRSARDSHVPIL 220 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTE--EEEEESTTSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhhee--cCccCCCCcccccc
Confidence 3699999999999998765544321100 0011111 234568899999999999999987432 21111111100112
Q ss_pred HHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHh--cCCccchhHHHHHHHhHHHHHHHHHHHHHhccc
Q 023174 91 GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLA--RKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (286)
Q Consensus 91 ~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~--~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 159 (286)
. ++.+|+++++..+..++.||+.+||||++++++. +...|.+.|+||++|++|+++|+++++.++.++
T Consensus 221 a-pl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 221 A-PLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp C-HHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred h-HHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 2 7899999999999999999999999999999998 223799999999999999999999999887443
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.69 E-value=1.2e-17 Score=149.50 Aligned_cols=141 Identities=18% Similarity=0.139 Sum_probs=101.1
Q ss_pred ccchhhhhhhhhhhcccccccccCCC-------C--CC----------CCCCCCCcchHHHHHHHHHHHHHHHHHHHHhH
Q 023174 12 ANKFAERQPIGTAAQTQDGKDYVEPP-------P--AP----------LFEPGELKSWSFYRAGIAEFIATFLFLYISVL 72 (286)
Q Consensus 12 ~~~y~~aq~~g~~~~~~~~~~~~~~~-------~--~~----------~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~ 72 (286)
.-.|+++|++|+++++..++...++. . .. ...+......+..+.++.|+++||+|+++++.
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~ 165 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILA 165 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 34699999999999988654333210 0 00 00000011235789999999999999999887
Q ss_pred HhhhccccCCCCCCCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhc------CCccc------hhHHHHHH
Q 023174 73 TVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR------KLSLT------RALFYMVM 140 (286)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~------~~~~~------~~~~yi~a 140 (286)
... .++.. ..+.+ .++.+|+.+....+..++.||+.+||||++++.+.. +..|. ..|+||++
T Consensus 166 ~~d--~~~~~---~~~~~-~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vg 239 (281)
T 1ldf_A 166 LTD--DGNGV---PRGPL-APLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFG 239 (281)
T ss_dssp HHC--TTSSS---CCGGG-HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHH
T ss_pred Hhc--cCCCC---cccch-HHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHH
Confidence 532 11111 01112 389999999999999999999999999999999874 12333 69999999
Q ss_pred HhHHHHHHHHHHHHHhcc
Q 023174 141 QCLGAICGAGVVKGFMGA 158 (286)
Q Consensus 141 Q~lGa~~g~~~~~~~~~~ 158 (286)
|++|+++|+++++.++.+
T Consensus 240 Pi~Ga~la~~~y~~l~~~ 257 (281)
T 1ldf_A 240 PIVGAIVGAFAYRKLIGR 257 (281)
T ss_dssp HHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHHHhCc
Confidence 999999999999998843
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.69 E-value=1.7e-17 Score=146.85 Aligned_cols=141 Identities=18% Similarity=0.131 Sum_probs=100.6
Q ss_pred ccchhhhhhhhhhhcccccccccCCC----CCCCC-CC-CCCcchHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCC
Q 023174 12 ANKFAERQPIGTAAQTQDGKDYVEPP----PAPLF-EP-GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCS 85 (286)
Q Consensus 12 ~~~y~~aq~~g~~~~~~~~~~~~~~~----~~~~~-~~-~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~ 85 (286)
.-.|+++|++|+++++...+...++. ..+.. +. ....+....+.++.|+++|++|+++++.... .++..
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d--~~~~~--- 162 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVD--ENICG--- 162 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHC--HHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhC--cccCC---
Confidence 34699999999999998654433211 00000 00 0111222356899999999999999887542 21110
Q ss_pred CCchhHHHHHHHHHHHHHHHhhcCccccccChHHHHHHHHhcC-----Ccc----chhHHHHHHHhHHHHHHHHHHHHHh
Q 023174 86 TVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK-----LSL----TRALFYMVMQCLGAICGAGVVKGFM 156 (286)
Q Consensus 86 ~~~~~~~~~~~g~~v~~~~~~~~~~sGah~NPavtl~~~~~~~-----~~~----~~~~~yi~aQ~lGa~~g~~~~~~~~ 156 (286)
....+.+++.+|+.+....+..++.||+++||||++++++... ..| .+.|+||++|++|+++|+++++.++
T Consensus 163 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~ 242 (258)
T 3c02_A 163 KFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVI 242 (258)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTH
T ss_pred cccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHh
Confidence 0112333789999999999999999999999999999999852 245 4489999999999999999999887
Q ss_pred c
Q 023174 157 G 157 (286)
Q Consensus 157 ~ 157 (286)
.
T Consensus 243 ~ 243 (258)
T 3c02_A 243 C 243 (258)
T ss_dssp H
T ss_pred c
Confidence 3
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=52.18 E-value=1.2e+02 Score=26.32 Aligned_cols=104 Identities=14% Similarity=0.154 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhhcC-ccccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhc-cccccccCCc---
Q 023174 93 AWAFGGMIFVLVYCTAG-ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG-AGQYGRLAGG--- 167 (286)
Q Consensus 93 ~~~~g~~v~~~~~~~~~-~sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~-~~~~~~~~~~--- 167 (286)
++.+.+.+++.++.-+. .|| |--.+ -..+.+|.+|.+..--|.-=.+|=++|++++..+.. ........+.
T Consensus 72 g~~F~vGL~lVvl~G~ELFTg---n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T 3kcu_A 72 GICFSLGLILCVVCGADLFTS---TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_dssp HHHHTHHHHHHHHHTCCCTTT---THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHH
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHHH
Confidence 44555555555555444 344 32223 334567888877665555555555555555444421 1111110100
Q ss_pred -cceec---CCCCCcchhHHHHHHHHHHHHHHHHhcc
Q 023174 168 -ANVVA---HGYTKGDGLGAEIIGTFVLVYTVFSATD 200 (286)
Q Consensus 168 -~~~~~---~~~~~~~~~~~E~~~T~~Lv~~il~~~~ 200 (286)
..... .+.+..+.|+-=.++.++..+.++....
T Consensus 148 ~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~~ 184 (285)
T 3kcu_A 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYS 184 (285)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00011 1335577788888888888888876543
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=26.10 E-value=8.7 Score=34.28 Aligned_cols=21 Identities=33% Similarity=0.547 Sum_probs=17.4
Q ss_pred cCccccccChHHHHHHHHhcC
Q 023174 108 AGISGGHINPAVTLGLFLARK 128 (286)
Q Consensus 108 ~~~sGah~NPavtl~~~~~~~ 128 (286)
+.=||||++||.+++-.+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 334789999999999999754
No 29
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=23.87 E-value=3.4e+02 Score=23.12 Aligned_cols=103 Identities=14% Similarity=0.122 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHhhcCc-cccccChHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhccccccccCCcc---
Q 023174 93 AWAFGGMIFVLVYCTAGI-SGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--- 168 (286)
Q Consensus 93 ~~~~g~~v~~~~~~~~~~-sGah~NPavtl~~~~~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~--- 168 (286)
++.+...+++.++.-+.. || |-.......+.++.+|.+..--|.--.+|=++|++++..++....... .+..
T Consensus 68 g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~-~~~~~~~ 143 (268)
T 3tds_E 68 GLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVD-KGPVAEF 143 (268)
T ss_dssp HHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTS-SSHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCC-CcHHHHH
Confidence 444444444444433322 22 433233456778889988877777777777777776655441111100 0000
Q ss_pred -ceec---CCCCCcchhHHHHHHHHHHHHHHHHhc
Q 023174 169 -NVVA---HGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (286)
Q Consensus 169 -~~~~---~~~~~~~~~~~E~~~T~~Lv~~il~~~ 199 (286)
.... .+.+..+.|+-=.++.++..+.++...
T Consensus 144 ~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~ 178 (268)
T 3tds_E 144 FANTAASKASMPFTALFFRGILCNILVCVSVLCSF 178 (268)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 134556778888888888888877654
Done!