BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023180
(286 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 32/212 (15%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVE-STKGTRTSSGTFISASED 139
+PR + F + S E+ +++ AK RL S+ + ET + +T R S ++S E
Sbjct: 316 KPRIVRFLDIISDEEIETVKELAKPRL--SRATVHDPETGKLTTAHYRVSKSAWLSGYE- 372
Query: 140 KTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQ 191
+ ++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 373 -SPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTG-- 429
Query: 192 MSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFP 251
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LFP
Sbjct: 430 --NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFP 472
Query: 252 NGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
+G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 473 SGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 504
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 32/212 (15%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVE-STKGTRTSSGTFISASED 139
+PR + F + S + + + AK RL S+ + ET + +T R S ++S ED
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRL--SRATVHDPETGKLTTAQYRVSKSAWLSGYED 391
Query: 140 KTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQ 191
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 392 P--VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTG-- 447
Query: 192 MSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFP 251
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF
Sbjct: 448 --NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFA 490
Query: 252 NGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
+G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 491 SGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 140
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S ED
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVH-YRISKSAWLSGYEDP 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTG--- 447
Query: 193 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 252
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF +
Sbjct: 448 -NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFAS 491
Query: 253 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 492 GEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 140
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S E+
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVH-YRISKSAWLSGYENP 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTG--- 447
Query: 193 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 252
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF +
Sbjct: 448 -NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFAS 491
Query: 253 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 492 GEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 140
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S E+
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVH-YRISKSAWLSGYENP 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTG--- 447
Query: 193 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 252
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF +
Sbjct: 448 -NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFAS 491
Query: 253 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 492 GEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 81 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 140
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S E+
Sbjct: 334 KPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVH-YRISKSAWLSGYENP 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTG--- 447
Query: 193 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 252
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF +
Sbjct: 448 -NRIATWLFYMSDVLAGGATVFP---------------EVGASVWPKKGTAVFWYNLFAS 491
Query: 253 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 492 GEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 70 IQSIPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTS 129
+Q + +V+ P + + +F S + Q+I A+ L+ S +A GE + R S
Sbjct: 334 LQPVRKEVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVA--SGEKQLPVE-YRIS 390
Query: 130 SGTFISASEDKTGILELIEHKIARATMLPQT--HGEAFNVLRYEIGQKYDSHYD-AFNPA 186
++ + D +L ++H+IA T L + E V+ Y IG Y+ H+D A +P+
Sbjct: 391 KSAWLKDTVDP--VLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSPS 448
Query: 187 E--YGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGL 244
Y R+A+F++YLS VE GG T F + N V + L
Sbjct: 449 SPLYRMNSGNRVATFMIYLSSVEAGGATAFIYGN---------------FSVPVVKNAAL 493
Query: 245 LFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
+++L +G D +LH +CPV+ G+KWVA KWI + Q
Sbjct: 494 FWWNLHRSGEGDGDTLHAACPVLVGDKWVANKWIHEYGQ 532
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 70 IQSIPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTS 129
+Q I +V+ P + +F S + Q I A+ L+ S +A GE + R S
Sbjct: 334 LQPIRKEVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVA--SGEKQLQVE-YRIS 390
Query: 130 SGTFISASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPA 186
++ + D L + H+IA T L + E V+ Y IG Y+ H+D A +P+
Sbjct: 391 KSAWLKDTVDPK--LVTLNHRIAALTGLDVRPPYAEYLQVVNYGIGGHYEPHFDHATSPS 448
Query: 187 E--YGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGL 244
Y + R+A+F++YLS VE GG T F + N L V R L
Sbjct: 449 SPLYRMKSGNRVATFMIYLSSVEAGGATAFIYAN---------------LSVPVVRNAAL 493
Query: 245 LFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
+++L +G D +LH CPV+ G+KWVA KWI + Q
Sbjct: 494 FWWNLHRSGEGDSDTLHAGCPVLVGDKWVANKWIHEYGQ 532
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 82 PRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGET-VESTKGTRTSSGTFISASEDK 140
P + + + S E+ + I AK +L ++ +R +T V + R S +++ ED
Sbjct: 337 PHIVRYYDVMSDEEIEKIKQLAKPKL--ARATVRDPKTGVLTVASYRVSKSSWLE--EDD 392
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMS---QRLA 197
++ + ++ + T L E V Y +G +Y+ H+D F+ + + RLA
Sbjct: 393 DPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFD-FSRRPFDSTLKSEGNRLA 451
Query: 198 SFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDR 257
+FL Y+SDVE GG T+FP D+ G + P++G + +Y+LF +G D
Sbjct: 452 TFLNYMSDVEAGGATVFP-----------DF----GAAIWPKKGTAVFWYNLFRSGEGDY 496
Query: 258 TSLHGSCPVIKGEKWVATKWIRDQ 281
+ H +CPV+ G KWV+ KW ++
Sbjct: 497 RTRHAACPVLVGCKWVSNKWFHER 520
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 76 QVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS 135
+V+ RP + +F S E+ Q I A+ L+ S +A GE + R S ++
Sbjct: 338 EVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVA--SGEKQLQVE-YRISKSAWLK 394
Query: 136 ASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPAE--YGP 190
+ D +L ++H+IA T L + E V+ Y IG Y+ H+D A +P+ Y
Sbjct: 395 DTVDP--MLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRM 452
Query: 191 QMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLF 250
+ R+A+F++YLS VE GG T F + N V + L +++L
Sbjct: 453 KSGNRVATFMIYLSSVEAGGATAFIYGN---------------FSVPVVKNAALFWWNLH 497
Query: 251 PNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
+G D +LH CPV+ G+KWVA KWI + Q
Sbjct: 498 RSGEGDGDTLHAGCPVLVGDKWVANKWIHEYGQ 530
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 32/220 (14%)
Query: 73 IPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGT 132
I ++L + P A+ F N + + I A +LK + TV+++K T
Sbjct: 316 IKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRA--------TVQNSKTGELEHAT 367
Query: 133 F-ISASE----DKTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAE 187
+ IS S D +++ + +I T L Q E V Y +G YD H+D E
Sbjct: 368 YRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEE 427
Query: 188 YGP----QMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDG 243
R+A+ L Y+S E GG T+F +G V P + D
Sbjct: 428 KNAFKTLNTGNRIATVLFYMSQPERGGATVF---------------NHLGTAVFPSKNDA 472
Query: 244 LLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
L +Y+L +G D + H +CPV+ G KWV+ KWI ++ Q
Sbjct: 473 LFWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIHEKGQ 512
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 82 PRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGET-VESTKGTRTSSGTFISASEDK 140
P + + + S E+ + I AK +L ++ +R +T V + R S +++ ED
Sbjct: 336 PHIVRYYDVMSDEEIERIKEIAKPKL--ARATVRDPKTGVLTVASYRVSKSSWLE--EDD 391
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGP----QMSQRL 196
++ + ++ T L E V Y +G +Y+ H+D E R+
Sbjct: 392 DPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRV 451
Query: 197 ASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTID 256
A+FL Y+SDVE GG T+FP +G + P++G + +Y+L +G D
Sbjct: 452 ATFLNYMSDVEAGGATVFP---------------DLGAAIWPKKGTAVFWYNLLRSGEGD 496
Query: 257 RTSLHGSCPVIKGEKWVATKWIRDQEQ 283
+ H +CPV+ G KWV+ KW ++ Q
Sbjct: 497 YRTRHAACPVLVGCKWVSNKWFHERGQ 523
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 82 PRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGET-VESTKGTRTSSGTFISASEDK 140
P + + + S E+ + I AK +L ++ +R +T V + R S +++ ED
Sbjct: 338 PHIVRYYDVMSDEEIERIKEIAKPKL--ARATVRDPKTGVLTVASYRVSKSSWLE--EDD 393
Query: 141 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 192
++ + ++ T L E V Y +G +Y+ H+D AF G
Sbjct: 394 DPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTG--- 450
Query: 193 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 252
R+A+FL Y+SDVE GG T+FP +G + P++G + +Y+L +
Sbjct: 451 -NRVATFLNYMSDVEAGGATVFP---------------DLGAAIWPKKGTAVFWYNLLRS 494
Query: 253 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
G D + H +CPV+ G KWV+ KW ++ Q
Sbjct: 495 GEGDYRTRHAACPVLVGCKWVSNKWFHERGQ 525
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 76 QVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS 135
+V+ RP + +F S E+ Q I A+ L+ S +A GE + R S ++
Sbjct: 340 EVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVA--SGEKQLQVE-YRISKSAWLK 396
Query: 136 ASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPAE--YGP 190
+ D +L ++ +IA T L + E V+ Y IG Y+ H+D A +P+ Y
Sbjct: 397 DTVDP--VLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKM 454
Query: 191 QMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLF 250
+ R A+ ++YLS VE GG T F + N V + L +++L
Sbjct: 455 KSGNRAATLMIYLSSVEAGGATAFIYGN---------------FSVPVVKNAALFWWNLH 499
Query: 251 PNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283
+G D +LH CPV+ G+KWVA KWI + Q
Sbjct: 500 RSGEGDDDTLHAGCPVLVGDKWVANKWIHEYGQ 532
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 30/200 (15%)
Query: 89 NFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTGILELIE 148
N + +CQ I+ A +L SQ+ + K R S +IS + +++ I
Sbjct: 65 NLINPTKCQEIMQFANGKLFDSQV------LSGTDKNIRNSQQMWISKN---NPMVKPIF 115
Query: 149 HKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAF-----NPAEYGPQMSQRLASFLLYL 203
I R +P + E V+RY Q Y+ H+D+ +E+ + QR+ + L+YL
Sbjct: 116 ENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIERGGQRILTVLIYL 175
Query: 204 SDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGT-IDRTSLHG 262
++ G T FP N K KP+ GD L+FY L N SLH
Sbjct: 176 NNEFSDGHTYFPNLNQ---------------KFKPKTGDALVFYPLANNSNKCHPYSLHA 220
Query: 263 SCPVIKGEKWVATKWIRDQE 282
PV GEKW+A W R+++
Sbjct: 221 GMPVTSGEKWIANLWFRERK 240
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 121 ESTKGTRTSSGTFISASEDKTGILELIEHKIARATML-PQT--HGEAFNVLRYEIGQKYD 177
ES + R S T++ E ++ I ++ R T L P+ E V+RY G Y
Sbjct: 268 ESNELVRNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEIVEFSEPLQVVRYGEGGHYH 327
Query: 178 SHYDA-------------FNPAEYGP-QMSQRLASFLLYLSDVEEGGETMFPFENGIFLD 223
+H D+ E P + S R + L YL++V GGET+FP + +
Sbjct: 328 AHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVAD----N 383
Query: 224 SGYDYKKCI----------------GLKVKPRRGDGLLFYSLFPNGT-----IDRTSLHG 262
YD I L+VKP++G + +Y+ P+G +D SLHG
Sbjct: 384 RTYDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHG 443
Query: 263 SCPVIKGEKWVATKWI 278
C V +G KW+A WI
Sbjct: 444 GCLVTRGTKWIANNWI 459
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 73 IPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGT 132
I ++ + P A+ F + S ++ +I AK +L + + +S G ++
Sbjct: 319 IKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVH-------DSVTGKLVTATY 371
Query: 133 FISAS----EDKTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEY 188
IS S E + ++E + +I T L E + Y IG YD H+D E
Sbjct: 372 RISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEES 431
Query: 189 GPQMS----QRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGL 244
S R+A+ L Y+S GG T+F L P + D L
Sbjct: 432 KSFESLGTGNRIATVLFYMSQPSHGGGTVFTEAKSTIL---------------PTKNDAL 476
Query: 245 LFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQ 281
+Y+L+ G + + H +CPV+ G KWV+ KWI ++
Sbjct: 477 FWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIHEK 513
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 42/196 (21%)
Query: 121 ESTKGTRTSSGTFISASEDKTGILELIEHKIARATML-PQT--HGEAFNVLRYEIGQKYD 177
ES++ R S T++ E I+ I ++ R T L P+ E V+RY G Y
Sbjct: 267 ESSELVRNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYH 326
Query: 178 SHYDA-------------FNPAEYGP-QMSQRLASFLLYLSDVEEGGETMFPFENGIFLD 223
+H D+ E P + S R + L YL++V GGET+FP + +
Sbjct: 327 AHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVAD----N 382
Query: 224 SGYDYKKCI----------------GLKVKPRRGDGLLFYSLFPNGT-----IDRTSLHG 262
YD I L+VKP++G + +Y+ P+G +D SLHG
Sbjct: 383 RTYDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHG 442
Query: 263 SCPVIKGEKWVATKWI 278
C V +G KW+A WI
Sbjct: 443 GCLVTRGTKWIANNWI 458
>sp|B7KDQ8|Y1929_CYAP7 PKHD-type hydroxylase PCC7424_1929 OS=Cyanothece sp. (strain PCC
7424) GN=PCC7424_1929 PE=3 SV=1
Length = 220
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 169 RYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDY 228
RYE+G Y +H D G + SF L+L+ ++ +E G + G D
Sbjct: 85 RYEVGMSYGTHIDN---GLMGSNFWRSDVSFTLFLTAPKD-------YEGGELVIEGADD 134
Query: 229 KKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKW----IRDQEQH 284
+K L + + +L Y P+ T LH PV KG + VA W +RD +
Sbjct: 135 EKAYKLDL-----NSVLVY---PSST-----LHRVEPVTKGTRLVAVGWVQSLVRDASER 181
Query: 285 E 285
E
Sbjct: 182 E 182
>sp|B4RYP8|Y3560_ALTMD PKHD-type hydroxylase MADE_1017445/MADE_1018490 OS=Alteromonas
macleodii (strain DSM 17117 / Deep ecotype)
GN=MADE_1017445 PE=3 SV=1
Length = 226
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 29/124 (23%)
Query: 169 RYEIGQKYDSHYDA-FNPAEYGPQMSQRLASFLLYLSDVE--EGGETMFPFENGIFLDSG 225
RY Q Y H DA P + + S ++L+ E EGGE + + +G
Sbjct: 85 RYSESQTYGYHVDAAIMRIPNTPDVLRSDMSMTVFLTPKEDYEGGE--------LVIQTG 136
Query: 226 YDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIR----DQ 281
+ +K VK G +L+ S +SLH PV KGE+ A WI+ DQ
Sbjct: 137 FGEQK-----VKCDAGSAILYPS---------SSLHKVTPVTKGERIAAITWIQSMVSDQ 182
Query: 282 EQHE 285
+ E
Sbjct: 183 QMRE 186
>sp|Q13JL5|Y7756_BURXL PKHD-type hydroxylase Bxeno_B2756 OS=Burkholderia xenovorans
(strain LB400) GN=Bxeno_B2756 PE=3 SV=1
Length = 227
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 39/205 (19%)
Query: 85 LYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS-----ASED 139
L+ PN +AEQ + + ++RL + A G +G I+ A E
Sbjct: 3 LHIPNVLNAEQLRIV----RERLDTAGDAWVDGRATAGYQGAPVKRNQQIAEHTPIAREL 58
Query: 140 KTGILELIEHK-IARATMLP-QTHGEAFNVLRYEIGQKYDSHYD-AFNPAEYGPQMSQRL 196
IL IE + +++LP Q + FN RYE G ++ SH D A G ++ +
Sbjct: 59 GDVILASIERNPLFISSVLPNQVYPPLFN--RYEGGMQFGSHVDGAVRVLPNGVKLRTDV 116
Query: 197 ASFLLYLSDVEE--GGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGT 254
S L++SD + GGE + G+ +VK GD +++ +
Sbjct: 117 -SVTLFISDPADYDGGELVIEDTYGV-------------QQVKLPAGDMIVYPA------ 156
Query: 255 IDRTSLHGSCPVIKGEKWVATKWIR 279
TSLH PV +G + + W++
Sbjct: 157 ---TSLHQVTPVTRGVRVASFFWVQ 178
>sp|B2TA88|Y7102_BURPP PKHD-type hydroxylase Bphyt_7102 OS=Burkholderia phytofirmans
(strain DSM 17436 / PsJN) GN=Bphyt_7102 PE=3 SV=1
Length = 227
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 39/205 (19%)
Query: 85 LYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS-----ASED 139
L+ PN +AEQ + + ++RL + A G +G I+ A E
Sbjct: 3 LHIPNVLNAEQLRLV----RERLDQAGDAWVDGRATAGYQGAPVKRNQQIAEHTPVAREL 58
Query: 140 KTGILELIEHK-IARATMLP-QTHGEAFNVLRYEIGQKYDSHYD-AFNPAEYGPQMSQRL 196
IL IE + + +LP Q + FN RYE G ++ SH D A G ++ +
Sbjct: 59 GDVILASIERNPLFISAVLPNQVYPPLFN--RYEGGMQFGSHVDGAVRVLPNGVKLRTDV 116
Query: 197 ASFLLYLSDVEE--GGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGT 254
S L++SD + GGE + G+ +VK GD +++ +
Sbjct: 117 -SVTLFISDPADYDGGELVIEDTYGV-------------QQVKLPAGDMIVYPA------ 156
Query: 255 IDRTSLHGSCPVIKGEKWVATKWIR 279
TSLH PV +G + + W++
Sbjct: 157 ---TSLHQVTPVTRGARIASFFWVQ 178
>sp|B8IJ69|Y1077_METNO PKHD-type hydroxylase Mnod_1077 OS=Methylobacterium nodulans
(strain ORS2060 / LMG 21967) GN=Mnod_1077 PE=3 SV=1
Length = 227
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 76/203 (37%), Gaps = 40/203 (19%)
Query: 85 LYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTGIL 144
++ PN + + IA + RL+ + G + R I D L
Sbjct: 3 VHVPNVLTPAE----IALCRARLEAGEWI--DGRATAGQQAARAKHNLQIPEDSDTAREL 56
Query: 145 -ELIEHKIAR-----ATMLP-QTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRL- 196
ELI + R A LP + FN RY++G + +H D A G M R
Sbjct: 57 GELILRALGRSPLFNAAALPLRVLPPLFN--RYDVGMSFRNHVDGAVRAIPGAGMRLRAD 114
Query: 197 ASFLLYLSDVE--EGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGT 254
S L+L+D + EGGE + G VK GD +++ +
Sbjct: 115 VSTTLFLTDPDAYEGGELVIEDTFGSH-------------AVKLPAGDMIVYPA------ 155
Query: 255 IDRTSLHGSCPVIKGEKWVATKW 277
TSLH P+ +G +W A W
Sbjct: 156 ---TSLHRVEPITRGSRWSAFFW 175
>sp|Q0AP20|Y1675_MARMM PKHD-type hydroxylase Mmar10_1675 OS=Maricaulis maris (strain
MCS10) GN=Mmar10_1675 PE=3 SV=1
Length = 219
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 33/117 (28%)
Query: 167 VLRYEIGQKYDSHYDAFNPAEYGPQMSQRLA--SFLLYLSDVE--EGGETMFPFENGIFL 222
V RY G Y H D M R A SF L+LSD + +GGE + +G
Sbjct: 83 VSRYRDGMAYGPHID-------DALMGGRRADLSFTLFLSDPDSYDGGELVMDGPDG--- 132
Query: 223 DSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIR 279
++K GD +++ + +++H PV +GE+ W+R
Sbjct: 133 ----------ETEIKLAAGDAVVYAT---------SAIHQVAPVTRGERVAVVGWVR 170
>sp|B0KAA6|SYE2_THEP3 Glutamate--tRNA ligase 2 OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=gltX2 PE=3 SV=1
Length = 479
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 26/191 (13%)
Query: 52 VEKENESGLPHGETGDASIQSIPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQ 111
V + + G+ H + + + P Q+L + L P FA ++A + S+
Sbjct: 192 VVDDYQMGITHVIRAEEHLSNTPKQILIFEALGLEIPQFA---HVSMVLAPDR-----SK 243
Query: 112 LALRQGETVESTKGTRTSSGTFISASEDKTGILELIEHKIARATMLPQTHGEAFNVLRYE 171
L+ R G T + D+ + E I + I +P+ E F+V + +
Sbjct: 244 LSKRHG-------------ATSVQEFRDQGYLPEAIVNYITLLGWIPKDGEEIFDVSKSK 290
Query: 172 IGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPF---ENGIFLDSGYDY 228
+++ + NPA Y Q + + D+++ E + PF +N I D YDY
Sbjct: 291 --KEFTLERVSKNPAIYDVQKLTWINGHYIRNYDLDKLTEVVIPFLKAKNFIGEDFDYDY 348
Query: 229 KKCIGLKVKPR 239
K I V+ R
Sbjct: 349 IKKIVSVVRER 359
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,180,548
Number of Sequences: 539616
Number of extensions: 4632759
Number of successful extensions: 9810
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 9759
Number of HSP's gapped (non-prelim): 40
length of query: 286
length of database: 191,569,459
effective HSP length: 116
effective length of query: 170
effective length of database: 128,974,003
effective search space: 21925580510
effective search space used: 21925580510
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)