Query 023180
Match_columns 286
No_of_seqs 204 out of 1295
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 17:41:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023180.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023180hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 1.3E-50 4.6E-55 359.1 20.4 203 75-283 13-220 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 3.7E-51 1.3E-55 361.3 11.7 200 58-282 15-214 (216)
3 3dkq_A PKHD-type hydroxylase S 100.0 1.8E-33 6.1E-38 252.1 9.4 176 77-285 14-200 (243)
4 2hbt_A EGL nine homolog 1; pro 99.9 1.5E-23 5.2E-28 188.3 16.3 172 81-281 25-214 (247)
5 3kt7_A PKHD-type hydroxylase T 99.0 1.2E-09 4E-14 107.8 12.5 116 147-283 106-231 (633)
6 2rg4_A Uncharacterized protein 98.6 4.2E-07 1.4E-11 79.5 13.0 96 164-279 104-206 (216)
7 2fct_A Syringomycin biosynthes 97.7 0.00043 1.5E-08 62.8 12.8 181 81-276 20-256 (313)
8 2rdq_A 1-deoxypentalenic acid 97.6 9.9E-05 3.4E-09 66.0 7.4 95 173-281 134-253 (288)
9 2a1x_A Phytanoyl-COA dioxygena 97.6 0.00088 3E-08 60.6 12.7 184 82-280 34-254 (308)
10 3gja_A CYTC3; halogenase, beta 96.8 0.0034 1.2E-07 57.5 8.7 176 83-276 24-258 (319)
11 2iuw_A Alkylated repair protei 96.7 0.041 1.4E-06 48.3 14.1 168 83-276 41-226 (238)
12 3emr_A ECTD; double stranded b 96.6 0.0017 5.9E-08 59.3 4.8 174 81-277 45-265 (310)
13 3nnf_A CURA; non-HAEM Fe(II)/a 96.5 0.0032 1.1E-07 57.3 5.8 183 83-283 41-278 (344)
14 3s57_A Alpha-ketoglutarate-dep 96.4 0.11 3.8E-06 44.5 14.7 180 74-276 2-199 (204)
15 2opw_A Phyhd1 protein; double- 96.0 0.016 5.5E-07 51.6 7.5 93 173-277 150-263 (291)
16 3tht_A Alkylated DNA repair pr 95.8 0.055 1.9E-06 50.2 10.4 142 78-247 107-259 (345)
17 3i3q_A Alpha-ketoglutarate-dep 95.6 0.34 1.2E-05 41.7 14.3 108 143-276 85-199 (211)
18 1w9y_A 1-aminocyclopropane-1-c 82.0 7.3 0.00025 35.2 9.6 87 164-279 156-252 (319)
19 3pl0_A Uncharacterized protein 75.8 2.9 0.0001 36.9 4.7 55 194-268 171-226 (254)
20 1gp6_A Leucoanthocyanidin diox 71.8 25 0.00084 32.1 10.2 87 164-280 211-307 (356)
21 1dcs_A Deacetoxycephalosporin 64.7 40 0.0014 30.0 9.9 90 162-279 156-266 (311)
22 3oox_A Putative 2OG-Fe(II) oxy 60.2 32 0.0011 30.6 8.4 104 147-279 145-270 (312)
23 1nx8_A CARC, carbapenem syntha 55.4 11 0.00036 32.7 4.1 41 232-280 230-272 (273)
24 2wbq_A L-arginine beta-hydroxy 50.6 12 0.00041 33.9 3.9 41 232-280 295-339 (358)
25 2og5_A Putative oxygenase; non 49.3 12 0.00042 34.0 3.7 40 233-280 291-334 (357)
26 1odm_A Isopenicillin N synthas 49.1 38 0.0013 30.4 7.0 103 146-279 155-287 (331)
27 3dqy_A Toluene 1,2-dioxygenase 48.0 27 0.00091 25.6 4.8 48 200-269 5-52 (106)
28 1otj_A Alpha-ketoglutarate-dep 45.3 22 0.00076 30.8 4.6 41 233-281 235-276 (283)
29 1ds1_A Clavaminate synthase 1; 40.9 19 0.00064 32.1 3.5 41 232-280 258-302 (324)
30 3o2g_A Gamma-butyrobetaine dio 36.0 24 0.00082 32.6 3.4 40 233-280 328-370 (388)
31 3on7_A Oxidoreductase, iron/as 34.7 93 0.0032 27.1 7.0 88 163-279 150-253 (280)
32 3gce_A Ferredoxin component of 34.7 45 0.0015 25.2 4.3 51 197-269 11-61 (121)
33 2dbn_A Hypothetical protein YB 34.1 12 0.00042 35.7 1.1 78 192-279 295-403 (461)
34 2pp6_A Gifsy-2 prophage ATP-bi 34.0 31 0.0011 26.0 3.1 25 236-281 62-86 (102)
35 2i7f_A Ferredoxin component of 33.3 74 0.0025 23.2 5.3 50 197-269 4-55 (108)
36 4aiv_A Probable nitrite reduct 32.5 1.1E+02 0.0039 23.0 6.3 55 194-269 7-62 (119)
37 1vm9_A Toluene-4-monooxygenase 30.9 76 0.0026 23.2 5.0 50 200-270 5-55 (111)
38 2qpz_A Naphthalene 1,2-dioxyge 29.9 94 0.0032 22.3 5.3 50 199-270 6-55 (103)
39 2q4a_A Clavaminate synthase-li 29.9 30 0.001 30.8 2.9 34 232-274 292-325 (330)
40 3eat_X Pyoverdine biosynthesis 29.2 38 0.0013 29.8 3.4 42 232-281 240-282 (293)
41 1otj_A Alpha-ketoglutarate-dep 28.9 46 0.0016 28.8 3.9 35 176-216 96-130 (283)
42 3pvj_A Alpha-ketoglutarate-dep 28.5 40 0.0014 29.4 3.4 36 174-215 92-127 (277)
43 1rie_A Rieske iron-sulfur prot 28.3 58 0.002 25.0 4.0 21 240-269 62-82 (129)
44 1oih_A Putative alkylsulfatase 27.1 45 0.0015 29.2 3.5 41 232-280 243-284 (301)
45 1fqt_A Rieske-type ferredoxin 26.3 78 0.0027 23.3 4.3 49 198-269 7-56 (112)
46 3a4c_A DNA replication factor 25.8 1.6E+02 0.0056 22.2 5.9 57 87-153 47-103 (106)
47 2rdd_B UPF0092 membrane protei 25.7 39 0.0013 20.4 2.0 15 13-27 6-20 (37)
48 1oih_A Putative alkylsulfatase 25.2 52 0.0018 28.8 3.6 38 173-216 102-139 (301)
49 2opw_A Phyhd1 protein; double- 25.0 44 0.0015 28.8 3.0 23 83-105 16-38 (291)
50 2de6_D Ferredoxin component of 24.0 87 0.003 23.2 4.2 49 199-269 7-56 (115)
51 3r1j_A Alpha-ketoglutarate-dep 23.5 52 0.0018 29.2 3.3 36 174-215 98-133 (301)
52 1rfs_A Rieske protein; iron-su 21.2 42 0.0014 26.3 1.9 12 258-269 66-77 (139)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=1.3e-50 Score=359.06 Aligned_cols=203 Identities=42% Similarity=0.784 Sum_probs=177.1
Q ss_pred cEEeecCCCEEEecCCCCHHHHHHHHHHHhcCCCcceeeecC-CceeeeecceeeccceeecCCCChHHHHHHHHHHHHH
Q 023180 75 FQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQ-GETVESTKGTRTSSGTFISASEDKTGILELIEHKIAR 153 (286)
Q Consensus 75 ~~~ls~~P~I~~~~nfLs~eEC~~li~~a~~~l~~s~v~~~~-G~~~~~~~~~RtS~~~~l~~~ed~~~v~~~I~~Ri~~ 153 (286)
+++||++|+|++|+||||++||++||+++++++++|++.... |. ...+.+|+|+++|+...++ +++++|++||.+
T Consensus 13 ~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~--~~~~~~R~s~~~~l~~~~~--~~~~~i~~ri~~ 88 (224)
T 2jig_A 13 VVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGK--SVDSEIRTSTGTWFAKGED--SVISKIEKRVAQ 88 (224)
T ss_dssp EEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTE--EEECSSBCSEEEECCTTCS--HHHHHHHHHHHH
T ss_pred eEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCc--ccccCCEEEeeeEecCCCC--HHHHHHHHHHHH
Confidence 589999999999999999999999999999999999987643 33 2457899999999987554 589999999999
Q ss_pred hhCCCCCCCCcceEEecCCCCccccCccCCCCCCCC--CCCCceEEEEEEeccCCCCCcceecccCCCcccCCCCCcccc
Q 023180 154 ATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYG--PQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKC 231 (286)
Q Consensus 154 ~~glp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~--~~~~~R~~T~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~ 231 (286)
++++|...+|.+||+||++||+|++|+|++...... ..+++|++|+++||||+++||||+||..... ..++.+.+|
T Consensus 89 ~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~--~~~~~~~~c 166 (224)
T 2jig_A 89 VTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQK--VTGDGWSEC 166 (224)
T ss_dssp HHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSC--CCSTTSCTT
T ss_pred HhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccc--ccccccccc
Confidence 999999999999999999999999999998653211 2457999999999999999999999976422 234455666
Q ss_pred --ccEEEecCcccEEEeeecCCCCCCCCCCcccccccccceEEEEEeccccccc
Q 023180 232 --IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 283 (286)
Q Consensus 232 --~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~q 283 (286)
.+++|+|++|+||+|+|+++||++|++++|+||||++|+||++++||+.++.
T Consensus 167 ~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~ 220 (224)
T 2jig_A 167 AKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPI 220 (224)
T ss_dssp GGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCC
T ss_pred ccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCc
Confidence 4799999999999999999999999999999999999999999999998753
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=3.7e-51 Score=361.32 Aligned_cols=200 Identities=33% Similarity=0.630 Sum_probs=168.9
Q ss_pred CCCCCCCCCCCcccccccEEeecCCCEEEecCCCCHHHHHHHHHHHhcCCCcceeeecCCceeeeecceeeccceeecCC
Q 023180 58 SGLPHGETGDASIQSIPFQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISAS 137 (286)
Q Consensus 58 ~~~~~~~~~~~~~~~~p~~~ls~~P~I~~~~nfLs~eEC~~li~~a~~~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~~ 137 (286)
+-.+.|..-...-..++++++|++|+|++++||||++||++||+++++.+++|++.. + ...+++|+|+++|+..
T Consensus 15 ~~~~~~~~~~~~~r~v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~--~---~~~~~~RtS~~~wl~~- 88 (216)
T 3itq_A 15 IFDHKGNVIKTEDREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGS--S---RDVNDIRTSSGAFLDD- 88 (216)
T ss_dssp SCCCCSSEEECSSCEEEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC-------------CCCCGGGTTCEECCC-
T ss_pred cccCCCCEEecCCceEEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceecc--C---CccCCcEeeeeEEeCC-
Confidence 333444333333345567899999999999999999999999999999999998732 1 2357899999999986
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCcceEEecCCCCccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecccC
Q 023180 138 EDKTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFE 217 (286)
Q Consensus 138 ed~~~v~~~I~~Ri~~~~glp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~~ 217 (286)
+ +++++|++||++++|+|...+|.+||+||++||+|++|+|++..... ...++|++|+++||||+++||||+||.
T Consensus 89 -~--~~v~~i~~Ri~~~~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~-~~~~~R~~T~l~YLnd~~~GGeT~Fp~- 163 (216)
T 3itq_A 89 -N--ELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSR-SAANNRISTLVMYLNDVEEGGETFFPK- 163 (216)
T ss_dssp -C--HHHHHHHHHHHHHHTSCGGGBCCCEEEEECBTCCEEEECSSCCTTSG-GGGGCEEEEEEEECSCCSEECCEEETT-
T ss_pred -c--HHHHHHHHHHHHhcCceeccccceeEEEeCCCCccccccCCCcCCCc-ccCCceEEEEEEecccCCcCceeEecC-
Confidence 3 58999999999999999999999999999999999999999865321 124799999999999999999999997
Q ss_pred CCcccCCCCCccccccEEEecCcccEEEeeecCCCCCCCCCCcccccccccceEEEEEecccccc
Q 023180 218 NGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQE 282 (286)
Q Consensus 218 ~~~~~~~~~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~ 282 (286)
.+++|+|++|+||+|+|+++||++|++++|+||||++|+||++|+|+|.+.
T Consensus 164 --------------~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~ 214 (216)
T 3itq_A 164 --------------LNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGT 214 (216)
T ss_dssp --------------TTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSC
T ss_pred --------------CCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCC
Confidence 579999999999999999999999999999999999999999999999874
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=100.00 E-value=1.8e-33 Score=252.10 Aligned_cols=176 Identities=20% Similarity=0.236 Sum_probs=138.2
Q ss_pred EeecCCCEEEecCCCCHHHHHHHHHHHhc-CCCcceeeecCCceeeeecceeeccceeecCCCChHHHHHHHHHHHHHhh
Q 023180 77 VLSWRPRALYFPNFASAEQCQSIIATAKK-RLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTGILELIEHKIARAT 155 (286)
Q Consensus 77 ~ls~~P~I~~~~nfLs~eEC~~li~~a~~-~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~~ed~~~v~~~I~~Ri~~~~ 155 (286)
-+-..+.+++|+||||++||++||++++. .+.++.+.. |. ....+|.+ .++..+ + ++++.|.+||.+++
T Consensus 14 ~~~~~~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~t~--g~---~~~~vr~n--~~l~~d-~--~~~~~l~~~i~~~l 83 (243)
T 3dkq_A 14 NLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTS--GA---MATTRKRN--QQLDKD-D--PVAVALGQQIMDRL 83 (243)
T ss_dssp CCCCBTTBEEECCSSCHHHHHHHHHHHHTSCCEEECCCS--SB---SSCCCEEE--EECCTT-C--HHHHHHHHHHHHHH
T ss_pred ccccCCCEEEECCCCCHHHHHHHHHHHhhCCCccCcccC--CC---ccccceee--eEECCC-C--HHHHHHHHHHHHHH
Confidence 35568899999999999999999999975 555544321 21 22445665 455432 2 58999999999987
Q ss_pred CCC--------CCCCCcceEEecCCCCccccCccCCCCCCCCCCCCceEEEEEEeccC--CCCCcceecccCCCcccCCC
Q 023180 156 MLP--------QTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSD--VEEGGETMFPFENGIFLDSG 225 (286)
Q Consensus 156 glp--------~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd--v~eGGeT~Fp~~~~~~~~~~ 225 (286)
+.. ....|.+|++||++|++|++|+|.+.....+ ...+|.+|+++|||| +++||||+||...
T Consensus 84 ~~~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~-~~~~r~~T~~lYLndp~~~~GGetvf~~~~------- 155 (243)
T 3dkq_A 84 LAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPD-GMIRTDLSATLFLSEPENYQGGELVIQDTY------- 155 (243)
T ss_dssp HTCHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETT-EEEECCEEEEEECSCGGGEEECCEEEEETT-------
T ss_pred ccCcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCC-ccccceEEEEEEeCCCCCCCCceEEEeeCC-------
Confidence 654 1346779999999999999999998643211 023689999999999 6799999999742
Q ss_pred CCccccccEEEecCcccEEEeeecCCCCCCCCCCcccccccccceEEEEEeccccccccC
Q 023180 226 YDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQHE 285 (286)
Q Consensus 226 ~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~q~~ 285 (286)
....|+|++|++|+|++ .++|+||||++|+||++++||++..+++
T Consensus 156 ------~~~~V~P~~G~~v~F~s---------~~lH~v~pV~~G~R~~~~~Wi~s~vr~~ 200 (243)
T 3dkq_A 156 ------GQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGERTAAFMWLQSMVRDE 200 (243)
T ss_dssp ------EEEEECCCTTCEEEEET---------TSEEEECCEEEECEEEEEEEEEESCCCH
T ss_pred ------CcEEEecCCCEEEEECC---------CCeEcCccccccCEEEEEEehhhccCCh
Confidence 35889999999999986 6899999999999999999999887764
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.91 E-value=1.5e-23 Score=188.32 Aligned_cols=172 Identities=22% Similarity=0.251 Sum_probs=126.0
Q ss_pred CCCEEEecCCCCHHHHHHHHHHHhc-----CCCcceeeecCCceeeeecceeeccceeecCCCChHH----HHHHHHHHH
Q 023180 81 RPRALYFPNFASAEQCQSIIATAKK-----RLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTG----ILELIEHKI 151 (286)
Q Consensus 81 ~P~I~~~~nfLs~eEC~~li~~a~~-----~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~~ed~~~----v~~~I~~Ri 151 (286)
.+.+++++|||+++||+.|++.++. .++++.+.. ++ ....+.+|++..+|+...+...+ +.+.+++.+
T Consensus 25 ~~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~--~~-~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~ 101 (247)
T 2hbt_A 25 KHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVS--QK-SDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLI 101 (247)
T ss_dssp HTSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEE--CC-SSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCCCHHHHHHHHHHHHhhhhcCCcccccccc--cc-ccccccccccceeeecccccchhHHHHHHHHHHHHH
Confidence 3457899999999999999999874 467777653 11 12457899999999987643111 344444444
Q ss_pred HHhhCC-CCC---CCCcceEEecCC-CCccccCccCCCCCCCCCCCCceEEEEEEeccCC----CCCcceecccCCCccc
Q 023180 152 ARATML-PQT---HGEAFNVLRYEI-GQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDV----EEGGETMFPFENGIFL 222 (286)
Q Consensus 152 ~~~~gl-p~~---~~E~lqv~rY~~-G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv----~eGGeT~Fp~~~~~~~ 222 (286)
..+.+. ... ..+.+|+++|.+ |++|.+|.|... ..+|.+|+++|||+. +.||+|.|.....
T Consensus 102 ~~ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~-------~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~--- 171 (247)
T 2hbt_A 102 RHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPN-------GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK--- 171 (247)
T ss_dssp HHTTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCS-------CCSEEEEEEEECBTTCCHHHHBCCEEECCTTC---
T ss_pred HHHhhhcCcccccccceEEEEEecCCCCcccccccCCC-------CCCceEEEEEEeCCCCCCCCCceeEEEecCCC---
Confidence 333221 111 125689999996 999999999832 357999999999994 4699997653211
Q ss_pred CCCCCccccccEEEecCcccEEEeeecCCCCCCCCCCcccccccccceEEEEEeccccc
Q 023180 223 DSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQ 281 (286)
Q Consensus 223 ~~~~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 281 (286)
.....|.|+.|++|+|.+ +.+++|+++|+ .|.||+++.|++..
T Consensus 172 --------~~~~~v~P~~grlv~F~s-------~~~~~H~V~p~-~~~R~sit~W~~~~ 214 (247)
T 2hbt_A 172 --------AQFADIEPKFDRLLFFWS-------DRRNPHEVQPA-YATRYAITVWYFDA 214 (247)
T ss_dssp --------SSCEEECCBTTEEEEEEC-------STTCCEEECCB-SSCEEEEEEEEEEH
T ss_pred --------CceEEEEcCCCEEEEEec-------CCCceeeeccC-CCEEEEEEEEEcCC
Confidence 134799999999999987 34589999995 68999999999875
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=99.04 E-value=1.2e-09 Score=107.81 Aligned_cols=116 Identities=18% Similarity=0.152 Sum_probs=86.5
Q ss_pred HHHHHHHhhCC-CCC-CCCcceEEecCCCCccccCccCCCCCCCCCCCCceEEEEEEeccCC------CCCcceecccCC
Q 023180 147 IEHKIARATML-PQT-HGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDV------EEGGETMFPFEN 218 (286)
Q Consensus 147 I~~Ri~~~~gl-p~~-~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv------~eGGeT~Fp~~~ 218 (286)
+.+-++++||+ +.. ..-.+++.+|.+|.+|.+|.|.+ +.|.+|+++|||+. +.||++.+....
T Consensus 106 Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~---------~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d 176 (633)
T 3kt7_A 106 YRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI---------GSRRISFILYLPDPDRKWKSHYGGGLRLFPSI 176 (633)
T ss_dssp HHHHHHHHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC---------TTEEEEEEEECSCTTSCCCGGGBCCEEECCEE
T ss_pred HHHHHHHHhCCcccCCCceeEEEEEeCCCCeeeecCCCC---------CCeEEEEEEEcCCCCCCCCccCCceEEEecCC
Confidence 45566778898 443 23458999999999999999953 34999999999983 369999886532
Q ss_pred CcccCCCCCccccccEEEecCcccEEEeeecCCCCCCCC-CCcccccccc-cceEEEEEeccccccc
Q 023180 219 GIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDR-TSLHGSCPVI-KGEKWVATKWIRDQEQ 283 (286)
Q Consensus 219 ~~~~~~~~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~-~~lH~g~PV~-~G~K~i~~~Wi~~~~q 283 (286)
..... ......+|.|.-|++++|.+ .+ .++|++.||. ...++.++.|++...-
T Consensus 177 ~~~~P-----~~d~~~~I~P~fNrLV~F~v-------sp~~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 177 LPNVP-----HSDPSAKLVPQFNQIAFFKV-------LPGFSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp ETTEE-----CSSCSEEECCCTTEEEEEEC-------CTTTCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred CcCCC-----CCCceEEEecCCCeEEEEEc-------CCCCCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 10000 00135789999999999986 22 7999999998 5589999999987643
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.62 E-value=4.2e-07 Score=79.48 Aligned_cols=96 Identities=17% Similarity=0.034 Sum_probs=70.3
Q ss_pred cceEEecCCCCccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecccCCCccc---C---CCCCccccccEEEe
Q 023180 164 AFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFL---D---SGYDYKKCIGLKVK 237 (286)
Q Consensus 164 ~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~~~~~~~---~---~~~~~~~~~~l~V~ 237 (286)
...+..|.+|+++.+|.|. ++.+|.++|||..+.||++.|........ + .+.......-..|+
T Consensus 104 ~~W~~~~~~G~~~~~H~H~-----------~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~ 172 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHP-----------HSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVA 172 (216)
T ss_dssp EEEEEEECTTCCEEEECCT-----------TCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEEC
T ss_pred eEEEEEcCCCCcccCccCC-----------CCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEec
Confidence 4678899999999999872 46899999999988999999975422110 0 00001101124899
Q ss_pred cCcccEEEeeecCCCCCCCCCCccccccccc-ceEEEEEeccc
Q 023180 238 PRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK-GEKWVATKWIR 279 (286)
Q Consensus 238 P~~G~allF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~~Wi~ 279 (286)
|+.|++|+|++ ...|++.|... ++|+++..-+.
T Consensus 173 P~~G~lvlFpS---------~l~H~V~p~~~~~~RiSIsFN~~ 206 (216)
T 2rg4_A 173 PKVGDVLLWES---------WLRHEVPMNMAEEDRISVSFNYA 206 (216)
T ss_dssp CCTTEEEEEET---------TSCEEECCCCSSSCEEEEEEEEE
T ss_pred CCCCeEEEECC---------CCEEeccCCCCCCCEEEEEEEee
Confidence 99999999997 69999999875 58888765443
No 7
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.69 E-value=0.00043 Score=62.76 Aligned_cols=181 Identities=15% Similarity=0.140 Sum_probs=93.3
Q ss_pred CCCEEEecCCCCHHHHHHHHHHHhcCCCc--ceeeecCCceeeeecceeeccceeecCCCChHHHH-----HHHHHHHHH
Q 023180 81 RPRALYFPNFASAEQCQSIIATAKKRLKP--SQLALRQGETVESTKGTRTSSGTFISASEDKTGIL-----ELIEHKIAR 153 (286)
Q Consensus 81 ~P~I~~~~nfLs~eEC~~li~~a~~~l~~--s~v~~~~G~~~~~~~~~RtS~~~~l~~~ed~~~v~-----~~I~~Ri~~ 153 (286)
+...+++++||+++||+.+.+.+...+.. ..+... +... .....|.....+. .++ .+. ..|.+.+++
T Consensus 20 ~dGyvvl~~~l~~e~v~~l~~~~~~~l~~~~~~~~~~-~~~~-~~~~~~~~~~~~~---~~~-~~~~~~~~p~l~~~~~~ 93 (313)
T 2fct_A 20 KNGFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQD-LDAI-SGGTNIANYDRHL---DDD-FLASHICRPEICDRVES 93 (313)
T ss_dssp HHSEEEEEESSCHHHHHHHHHHHHHHHTCCTTCSCCC-CCC-----CGGGGBCGGG---TCH-HHHHHTTCHHHHHHHHH
T ss_pred hCCEEECCCCCCHHHHHHHHHHHHHHHhccccccccc-cccc-CCccchhcccccc---ccH-HHHHHHcChHHHHHHHH
Confidence 34568999999999999998776542211 111110 0000 0000121111111 011 111 234555666
Q ss_pred hhCCCCCCCCcceEEecCCCCccccCccCCCCCCCC------CCCCc--eEEEEEEeccCCC-CCcceec-ccCCCccc-
Q 023180 154 ATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYG------PQMSQ--RLASFLLYLSDVE-EGGETMF-PFENGIFL- 222 (286)
Q Consensus 154 ~~glp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~------~~~~~--R~~T~liYLndv~-eGGeT~F-p~~~~~~~- 222 (286)
++|-+.-.....-+.+...++...||.|...-...+ +.... +.+|+.|+|.|+. +.|.|.| |.......
T Consensus 94 llG~~~~~~~~~~~~k~Pg~~~~~wHqD~~~~~~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vPGSH~~~~~ 173 (313)
T 2fct_A 94 ILGPNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNY 173 (313)
T ss_dssp HHCSCEEEEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETTCTTSCCB
T ss_pred HcCCCeEeeeeeEEEeCCCCCCCCccccccccccCCCccccccccccccCeEEEEEEeccCCccCCCEEEEcCCCcCCcc
Confidence 677221111111122333234468999985421111 00111 6899999999984 5677766 53322110
Q ss_pred CC-----------------C-------CCc-----------cccccEEEecCcccEEEeeecCCCCCCCCCCcccccccc
Q 023180 223 DS-----------------G-------YDY-----------KKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVI 267 (286)
Q Consensus 223 ~~-----------------~-------~~~-----------~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~ 267 (286)
+. + +++ .....+.+.-++|++|||. ..++|++.|..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~---------~~l~H~s~~N~ 244 (313)
T 2fct_A 174 DETKRMTYEPDANNSVVKDGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFW---------STLMHASYPHS 244 (313)
T ss_dssp CTTSCCCCCTTTCSSCEETTEEEEBTTBCGGGGBSSTTCCCCGGGCEEECBCTTEEEEEE---------TTSEEEECCBC
T ss_pred ccccccccChhhhhhhhhccccccccccchhhhccccccCCccCceeEeeeCCceEEEEe---------CCceeeCCCCC
Confidence 00 0 000 1234578899999999995 58999999998
Q ss_pred --c-ceEEEEEe
Q 023180 268 --K-GEKWVATK 276 (286)
Q Consensus 268 --~-G~K~i~~~ 276 (286)
. ..++++..
T Consensus 245 ~ss~~~R~a~~~ 256 (313)
T 2fct_A 245 GESQEMRMGFAS 256 (313)
T ss_dssp SSSSSCEEEEEE
T ss_pred CCCCCceEEEEE
Confidence 4 36776653
No 8
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.63 E-value=9.9e-05 Score=66.05 Aligned_cols=95 Identities=18% Similarity=0.108 Sum_probs=62.3
Q ss_pred CCccccCccCCCCCCCCCCCCceEEEEEEeccCCC-CCcceec-ccCCCcccCCC---------------C---C-cccc
Q 023180 173 GQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVE-EGGETMF-PFENGIFLDSG---------------Y---D-YKKC 231 (286)
Q Consensus 173 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~-eGGeT~F-p~~~~~~~~~~---------------~---~-~~~~ 231 (286)
|....||.|..... ...+.+|+.|+|.|+. +.|.|.| |.......... . + ..+.
T Consensus 134 g~~~~wHqD~~~~~-----~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (288)
T 2rdq_A 134 HYLTPFHQDGFYIG-----PNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDE 208 (288)
T ss_dssp TTSCCSBCHHHHSC-----SCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTS
T ss_pred CCCcCccccccccC-----CCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccC
Confidence 45678999985421 2346899999999985 5677766 53322111000 0 0 0111
Q ss_pred ccEEEecCcccEEEeeecCCCCCCCCCCcccccccccc----eEEEEEeccccc
Q 023180 232 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG----EKWVATKWIRDQ 281 (286)
Q Consensus 232 ~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G----~K~i~~~Wi~~~ 281 (286)
..+.+.-++|++|||. ..++|++.|..+. .+|++..|+...
T Consensus 209 ~~v~~~~~aGdv~lf~---------~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 209 HLLHSPMEPGDILLFH---------AHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp CEECCCCCTTCEEEEE---------TTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred ceeecccCCCCEEEEe---------CCceecCCCCCCCCccceEEEEEEEEecC
Confidence 2356777999999995 4899999999875 378888887654
No 9
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.55 E-value=0.00088 Score=60.58 Aligned_cols=184 Identities=15% Similarity=0.084 Sum_probs=92.4
Q ss_pred CCEEEecCCCCHHHHHHHHHHHhcCCCc-----ceeeecC---CceeeeecceeeccceeecCCCChHHHH-----HHHH
Q 023180 82 PRALYFPNFASAEQCQSIIATAKKRLKP-----SQLALRQ---GETVESTKGTRTSSGTFISASEDKTGIL-----ELIE 148 (286)
Q Consensus 82 P~I~~~~nfLs~eEC~~li~~a~~~l~~-----s~v~~~~---G~~~~~~~~~RtS~~~~l~~~ed~~~v~-----~~I~ 148 (286)
-..+++++||+++||++|.+.++..+.. ......+ +++... ...+.-....- ...++ .+. ..|.
T Consensus 34 dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~-~~~~l~~~p~l~ 110 (308)
T 2a1x_A 34 NGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYA-PSEKMITKVQD-FQEDK-ELFRYCTLPEIL 110 (308)
T ss_dssp HSEEEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE------EECCEEEC-CTTSH-HHHHHHHCHHHH
T ss_pred CCEEEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccC-chHHHHhhhhh-hhhCH-HHHHHHhCHHHH
Confidence 3568999999999999999887652211 1000000 000000 00010001100 01122 121 2344
Q ss_pred HHHHHhhCCCCCCCCcceEEecC-CCCc---cccCccCCCCCCCCCCCCceEEEEEEeccCCC-CCcceec-ccCCCccc
Q 023180 149 HKIARATMLPQTHGEAFNVLRYE-IGQK---YDSHYDAFNPAEYGPQMSQRLASFLLYLSDVE-EGGETMF-PFENGIFL 222 (286)
Q Consensus 149 ~Ri~~~~glp~~~~E~lqv~rY~-~G~~---y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~-eGGeT~F-p~~~~~~~ 222 (286)
+.++++.|-+.-.....-+.+.. .|+. ..+|.|...-.. ....+.+|+.++|.|+. ++|.|.| |.......
T Consensus 111 ~~~~~llG~~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~~---~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~~~ 187 (308)
T 2a1x_A 111 KYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPF---RPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSL 187 (308)
T ss_dssp HHHHHHHCSSEEEEEEEEEEECCC--------CCBCGGGGCCE---ECGGGEEEEEEESSCBCTTBTCEEECTTGGGSCC
T ss_pred HHHHHhcCCCcceecceEEEcCCCCCCCccCCCCccCCccccC---CCCCCeEEEEEEeeccCCCCCcEEEEcCCCCCcc
Confidence 55556666321111111122322 2332 479999753210 11247899999999984 5677776 43221110
Q ss_pred -C----CC-----------CCcc-ccccEEEecCcccEEEeeecCCCCCCCCCCccccccccc-ceEEEEEecccc
Q 023180 223 -D----SG-----------YDYK-KCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK-GEKWVATKWIRD 280 (286)
Q Consensus 223 -~----~~-----------~~~~-~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~~Wi~~ 280 (286)
. .+ -++. +...+.+.-++|++|||. ..++|++.|... ..++++...+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~---------~~~~H~s~~N~s~~~R~~~~~~y~~ 254 (308)
T 2a1x_A 188 KPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFH---------PLLIHGSGQNKTQGFRKAISCHFAS 254 (308)
T ss_dssp CCCCC-----------CCCCC-CCCSCCEEECBCTTCEEEEC---------TTCCEEECCBCSSSCEEEEEEEEEE
T ss_pred ccccccccccCccccccCCccccccCCeEEccCCCccEEEEC---------CCccccCCCCCCCCceEEEEEEEEC
Confidence 0 00 0111 124578888999999994 589999999865 478877665443
No 10
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=96.84 E-value=0.0034 Score=57.50 Aligned_cols=176 Identities=13% Similarity=0.098 Sum_probs=88.3
Q ss_pred CEEEecCCCCHHHHHHHHHHHhcCCCc--ceeeecCCceeeeecceeeccceeecCCCChHHHH-----HHHHHHHHHhh
Q 023180 83 RALYFPNFASAEQCQSIIATAKKRLKP--SQLALRQGETVESTKGTRTSSGTFISASEDKTGIL-----ELIEHKIARAT 155 (286)
Q Consensus 83 ~I~~~~nfLs~eEC~~li~~a~~~l~~--s~v~~~~G~~~~~~~~~RtS~~~~l~~~ed~~~v~-----~~I~~Ri~~~~ 155 (286)
..++++++|+++||+.+.+..+..+.. ..+.. +.. ....|.....+. .++ .+. ..|...+++++
T Consensus 24 Gyv~i~~~l~~~~v~~l~~~i~~~l~~~~~~~~~--~~~---g~~~~~~~~~~~---~~~-~f~~l~~~p~l~~~~~~ll 94 (319)
T 3gja_A 24 GYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYP--DSN---GKANISNYDRHL---DID-LLAEHIMRPEIVDRVGSLI 94 (319)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHHHHHCCTTCSSC--SCS---SHHHHTTTTGGG---TCH-HHHHHHHCHHHHHHHHHHH
T ss_pred CEEECcCCCCHHHHHHHHHHHHHHhhcCcccccc--CCC---ccchhhhhhhcc---cCH-HHHHHHcChHHHHHHHHHc
Confidence 457889999999999998887653311 11110 100 011121111111 111 111 23445555666
Q ss_pred CCCCCCCCcceEEecCCCCccccCccCCCCCCCC------CCCC-----ceEEEEEEeccCCC-CCcceec-ccCCCccc
Q 023180 156 MLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYG------PQMS-----QRLASFLLYLSDVE-EGGETMF-PFENGIFL 222 (286)
Q Consensus 156 glp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~------~~~~-----~R~~T~liYLndv~-eGGeT~F-p~~~~~~~ 222 (286)
|-+.-..-..-+.++..++...||.|.......+ +... .+.+|+.++|.|+. +-|.|.| |.......
T Consensus 95 G~~~~~~~s~~~~k~Pg~~~~~wHqD~~y~~~~g~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vvPGSH~~~~ 174 (319)
T 3gja_A 95 GRNLLCWRSEFFPKYQGDEGTDWHQAATFAHATGKPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPGTHTSMN 174 (319)
T ss_dssp CSSEEEEEEEEEEECTTCCCEEEEEECCBCTTTCCBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEECSCC---CE
T ss_pred CCceEEeeeeEeecCCCCCCCCcccCCcccccCCCccccCccccccccccceEEEEEEeccCCCcCcCEEEEeCCccCcc
Confidence 6321111111123333223478999964322111 1111 13599999999984 5577766 43321110
Q ss_pred -CC-----------------C-------CC-----------ccccccEEEecCcccEEEeeecCCCCCCCCCCccccccc
Q 023180 223 -DS-----------------G-------YD-----------YKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPV 266 (286)
Q Consensus 223 -~~-----------------~-------~~-----------~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV 266 (286)
+. + .+ ..++..+.+.-++|++|||. ..++|++.|-
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~---------~~~~H~s~~N 245 (319)
T 3gja_A 175 YDESKGMDYDADAINQREKDGIKRGFFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFW---------SNTMHASLPH 245 (319)
T ss_dssp ECCC------------------------------------------CCBCCBCTTEEEEEE---------TTSCEEECCC
T ss_pred cCcccccccCchhhhhhccccccccccccchhhhccccccccccCceeEeeECCCeEEEEc---------CCccccCCCC
Confidence 00 0 00 01123456677899999996 4899999999
Q ss_pred c--cc-eEEEEEe
Q 023180 267 I--KG-EKWVATK 276 (286)
Q Consensus 267 ~--~G-~K~i~~~ 276 (286)
. +. .++++..
T Consensus 246 ~~ts~~~R~a~~~ 258 (319)
T 3gja_A 246 TGSKTDYRMGFAA 258 (319)
T ss_dssp CSCTTCCEEEEEE
T ss_pred CCCCCCcEEEEEE
Confidence 8 54 6766543
No 11
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=96.68 E-value=0.041 Score=48.32 Aligned_cols=168 Identities=15% Similarity=0.138 Sum_probs=95.9
Q ss_pred CEEEecCCCCHHHHHHHHHHHhc--CCCcceeeecCCceeeeecceeeccceeecC-----------C--CChHHHHHHH
Q 023180 83 RALYFPNFASAEQCQSIIATAKK--RLKPSQLALRQGETVESTKGTRTSSGTFISA-----------S--EDKTGILELI 147 (286)
Q Consensus 83 ~I~~~~nfLs~eEC~~li~~a~~--~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~-----------~--ed~~~v~~~I 147 (286)
.+.+++|||+++|.+.|++.... .+....... .|... ...|. .+|+.. . .. .+.+..|
T Consensus 41 gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~-~g~~~---~~~R~--~~~~g~~~Y~Ys~~~~~~~p~w-p~~l~~l 113 (238)
T 2iuw_A 41 RVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIR-EDITY---QQPRL--TAWYGELPYTYSRITMEPNPHW-HPVLRTL 113 (238)
T ss_dssp EEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEES-SSCEE---ECSSE--EEEEECCCTTSCHHHHCCBSSC-CHHHHHH
T ss_pred cEEEECCCCCHHHHHHHHHHHHHhCCCccCceec-CCccc---ccCCe--eEEcCCCccccCCcccCCCCCC-CHHHHHH
Confidence 48999999999999999988743 344332211 13221 11121 123331 0 12 2467778
Q ss_pred HHHHHHhhCCCCCCCCcceEEecCCCC-ccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecccCCCcccCCCC
Q 023180 148 EHKIARATMLPQTHGEAFNVLRYEIGQ-KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGY 226 (286)
Q Consensus 148 ~~Ri~~~~glp~~~~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~~~~~~~~~~~ 226 (286)
.++++++++.+ .+..-|..|..|+ .-.+|.|.... ++ ....++|+-+ |+...|-.......+..-
T Consensus 114 ~~~~~~~~g~~---~n~~LvN~Y~~G~d~i~~H~D~~~~--~~--~~~~IaslSL-------G~~~~f~f~~~~~~~~~~ 179 (238)
T 2iuw_A 114 KNRIEENTGHT---FNSLLCNLYRNEKDSVDWHSDDEPS--LG--RCPIIASLSF-------GATRTFEMRKKPPPEENG 179 (238)
T ss_dssp HHHHHHHHSCC---CCEEEEEEECSTTCCEEEECCCCGG--GC--SSCCEEEEEE-------ESCEEEEEEECCC-----
T ss_pred HHHHHHHhCCC---CCEEEEEEECCCCCceeCCcCChhh--cC--CCCcEEEEEC-------CCCEEEEEeccCCccccC
Confidence 88888877643 3456788999997 99999997432 11 1345666654 444555321100000000
Q ss_pred CccccccEEEecCcccEEEeeecCCCCCCCCCCcccccccc--cceEEEEEe
Q 023180 227 DYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVI--KGEKWVATK 276 (286)
Q Consensus 227 ~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~~ 276 (286)
+......++|.-..|++|++.- .......|+..+.. .+.++.+|.
T Consensus 180 ~~~~~~~~~i~L~~gsllvM~G-----~~r~~w~H~I~~~~~~~~~RIsLTf 226 (238)
T 2iuw_A 180 DYTYVERVKIPLDHGTLLIMEG-----ATQADWQHRVPKEYHSREPRVNLTF 226 (238)
T ss_dssp ---CCCEEEEEECTTCEEEEEE-----THHHHEEEEECCCSSCCCCEEEEEE
T ss_pred cccCCceEEEEcCCCCEEEECh-----hhhCccEecCCCcCCCCCCEEEEEe
Confidence 0000135789999999999963 22223469888763 567777763
No 12
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=96.60 E-value=0.0017 Score=59.29 Aligned_cols=174 Identities=17% Similarity=0.111 Sum_probs=90.8
Q ss_pred CCCEEEecCCCCHHHHHHHHHHHhcCCC-------cceeeecCCceeeeecceeeccceeecCCCChHHHH------HHH
Q 023180 81 RPRALYFPNFASAEQCQSIIATAKKRLK-------PSQLALRQGETVESTKGTRTSSGTFISASEDKTGIL------ELI 147 (286)
Q Consensus 81 ~P~I~~~~nfLs~eEC~~li~~a~~~l~-------~s~v~~~~G~~~~~~~~~RtS~~~~l~~~ed~~~v~------~~I 147 (286)
+-..++++|||+++||+.|.+.++..+. +..+....| ..+|.-...+.. + +++ ..|
T Consensus 45 ~dGyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~------~~~r~~~~~~~~---~--~~f~~l~~~p~l 113 (310)
T 3emr_A 45 KNGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPES------NDIRSIFHVHQD---D--NYFQDVANDKRI 113 (310)
T ss_dssp HHSEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTT------CCEEEEECHHHH---C--HHHHHHHTCHHH
T ss_pred hCCEEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCC------cceeEEeehhhc---c--HHHHHHHhChHH
Confidence 3456889999999999999988764221 111111111 112221111111 1 122 234
Q ss_pred HHHHHHhhCCCCCCCCcceEEecC---CCCccccCccCCCCC-CCCCCCCceEEEEEEeccCCC-CCcceec-ccCCCcc
Q 023180 148 EHKIARATMLPQTHGEAFNVLRYE---IGQKYDSHYDAFNPA-EYGPQMSQRLASFLLYLSDVE-EGGETMF-PFENGIF 221 (286)
Q Consensus 148 ~~Ri~~~~glp~~~~E~lqv~rY~---~G~~y~~H~D~~~~~-~~~~~~~~R~~T~liYLndv~-eGGeT~F-p~~~~~~ 221 (286)
...++++.|-+.-..- ..+.+. .|+...+|.|...-. ..+ ....+.+|+.|+|.|+. +.|.|.| |......
T Consensus 114 ~~i~~~llG~~~~l~~--s~~~~k~p~~g~~~~wHqD~~~~~~~~g-~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~ 190 (310)
T 3emr_A 114 LDIVRHLLGSDVYVHQ--SRINYKPGFKGKEFDWHSDFETWHVEDG-MPRMRAISVSIALSDNYSFNGPLMLIPGSHNYF 190 (310)
T ss_dssp HHHHHHHHTSCEEEEE--EEEECCCTTCCCCEEEECHHHHHHHHHC-CCSSCEEEEEEESSCBCSSSCCCEECTTGGGEE
T ss_pred HHHHHHHcCCceEEEe--eEEEEcCCCCCCCCCcCCCCccccccCC-CcccceEEEEEEecCCCCcCCCEEEEeCCCCCc
Confidence 4445556663211100 012233 256789999964210 000 01257899999999984 5676766 4322111
Q ss_pred c--------CC--------CCCcc----------ccc-cEEEecCcccEEEeeecCCCCCCCCCCcccccccccc-eEEE
Q 023180 222 L--------DS--------GYDYK----------KCI-GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG-EKWV 273 (286)
Q Consensus 222 ~--------~~--------~~~~~----------~~~-~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i 273 (286)
. +. .+... +.. -+.+.-++|++|||. ..++|++.|-.+. .+++
T Consensus 191 ~~~~g~~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~---------~~~~H~s~~N~S~~~R~~ 261 (310)
T 3emr_A 191 VSCVGETPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFE---------SNTMHGSTSNITPYPRNN 261 (310)
T ss_dssp EECCC-----------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEE---------TTCCEEECCCCSSCCCCE
T ss_pred ccccccccccccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEe---------CCceecCCCCCCCCCeEE
Confidence 0 00 00000 011 356677899999995 4899999998764 5665
Q ss_pred EEec
Q 023180 274 ATKW 277 (286)
Q Consensus 274 ~~~W 277 (286)
+..-
T Consensus 262 l~~~ 265 (310)
T 3emr_A 262 LFMV 265 (310)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5433
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=96.51 E-value=0.0032 Score=57.29 Aligned_cols=183 Identities=14% Similarity=0.095 Sum_probs=95.1
Q ss_pred CEEEecCCCCHHHHHHHHHHHhcCCCcceeee-----cCCceeeeecceeeccceeecCCCCh-HHHHHHHHHHHHHhhC
Q 023180 83 RALYFPNFASAEQCQSIIATAKKRLKPSQLAL-----RQGETVESTKGTRTSSGTFISASEDK-TGILELIEHKIARATM 156 (286)
Q Consensus 83 ~I~~~~nfLs~eEC~~li~~a~~~l~~s~v~~-----~~G~~~~~~~~~RtS~~~~l~~~ed~-~~v~~~I~~Ri~~~~g 156 (286)
.-++++|++|++|.+.|++..+.-...+.+.. ..+. ...+|+..-.+-.-..+. +.+..++-.-+..++|
T Consensus 41 GYLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~----s~~lrs~~H~~~~f~~h~~s~l~~rll~vl~~LlG 116 (344)
T 3nnf_A 41 GYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGG----IDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITG 116 (344)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTS----CCCCBCSEEEECSSCHHHHHHHHGGGHHHHHHHHT
T ss_pred ceEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCC----ccchhcccccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 34789999999999999998875322322211 1111 234553211110000000 1222333333334444
Q ss_pred CCCCCCCcceEEecCCCC-ccccCccC--CCCCCCCCCCCceEEEEEEeccCCC--CCcceec-ccCCCcc---------
Q 023180 157 LPQTHGEAFNVLRYEIGQ-KYDSHYDA--FNPAEYGPQMSQRLASFLLYLSDVE--EGGETMF-PFENGIF--------- 221 (286)
Q Consensus 157 lp~~~~E~lqv~rY~~G~-~y~~H~D~--~~~~~~~~~~~~R~~T~liYLndv~--eGGeT~F-p~~~~~~--------- 221 (286)
-..-. -.-+...+.+|+ -|.||.|. |... ....|-+|+-|=|.++. ++|...+ |...-..
T Consensus 117 ~el~i-~qs~~fe~kPG~KGFpWH~D~~~F~~~----~~eD~a~S~WIpLd~i~~e~nGGM~~VP~s~~Sgs~~y~~~d~ 191 (344)
T 3nnf_A 117 KNLMI-MHNALFSVEPNHKGLPWHVGVGSFSFT----KTEDFGASIWIPLDKITKEHRGGMQYVSTKIFPGQFYYSVFDL 191 (344)
T ss_dssp SCEEE-EEEEEEEECBTCCBSCSBCTTTTTTTB----CTTSCEEEEEEESSCBCTTTBCSEEEECTTTCCTHHHHHHHHH
T ss_pred Cceee-eecceEeeCCCCCCCCceecccccccc----cCCCCeEEEEEECCCCCccCCCceEEecCcccCcceeeecchH
Confidence 32211 112446677776 49999993 3221 22458889999998875 4666655 5221100
Q ss_pred -----c---CCCCCcc----ccccEEEec------------------CcccEEEeeecCCCCCCCCCCcccccccccc--
Q 023180 222 -----L---DSGYDYK----KCIGLKVKP------------------RRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG-- 269 (286)
Q Consensus 222 -----~---~~~~~~~----~~~~l~V~P------------------~~G~allF~n~~~~g~~D~~~lH~g~PV~~G-- 269 (286)
. .+.+... ...++--.| +.|+||+|. -.++|++.|+..+
T Consensus 192 ~~~~~Lk~qe~~~sLee~la~~~gi~~~~~~~~i~~~le~~~~ewd~epGDav~F~---------~~tlHga~plgn~~~ 262 (344)
T 3nnf_A 192 HLKNNIKWDESQGDLNEYVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFN---------KYVLHQSVPLKPGLH 262 (344)
T ss_dssp HHHHHTTCCGGGCCHHHHHHHCCCHHHHCCHHHHHHHHTTCEEECCBCTTCEEEEE---------TTCEEEECCBCTTSC
T ss_pred HHHHHhhccCCcccHHHHHHhhcCcccCccccccchhhhhhhccccCCCCcEEEEe---------cceeecCCCCCCCCc
Confidence 0 0111111 111222222 789999994 5899999988774
Q ss_pred -eE-EEEEeccccccc
Q 023180 270 -EK-WVATKWIRDQEQ 283 (286)
Q Consensus 270 -~K-~i~~~Wi~~~~q 283 (286)
.+ -....|+-+..-
T Consensus 263 ~rRRAfS~RfvGDDar 278 (344)
T 3nnf_A 263 KLRRAFVIRLVDYDTR 278 (344)
T ss_dssp SCEEEEEEEEEETTCB
T ss_pred cceeEEEEEEecCcce
Confidence 33 355777765543
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=96.39 E-value=0.11 Score=44.45 Aligned_cols=180 Identities=13% Similarity=0.065 Sum_probs=100.0
Q ss_pred ccEEeecCCCEEEecCCCCHHHHHHHHHHHhc--CC---CcceeeecCCceeeee----------cceeeccceeecCCC
Q 023180 74 PFQVLSWRPRALYFPNFASAEQCQSIIATAKK--RL---KPSQLALRQGETVEST----------KGTRTSSGTFISASE 138 (286)
Q Consensus 74 p~~~ls~~P~I~~~~nfLs~eEC~~li~~a~~--~l---~~s~v~~~~G~~~~~~----------~~~RtS~~~~l~~~e 138 (286)
|.+.+-.+-..+++++||+++|++.|.+.... .+ +...+.. .|+..... ..++-|..... ...
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~-~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~-~~p 79 (204)
T 3s57_A 2 SWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQV-FGKWHSVPRKQATYGDAGLTYTFSGLTLS-PKP 79 (204)
T ss_dssp CCEEEEETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEE-TTEEEECSSEEEEEECTTCCEEETTEEEC-CEE
T ss_pred CcceeeeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEE-CCeEeccCcEEEEECCCCCCcccCCCccc-CCC
Confidence 34555555667899999999999999887643 45 2223322 24321110 11222221111 111
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCCCCcceEEecCCCC-ccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecccC
Q 023180 139 DKTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQ-KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFE 217 (286)
Q Consensus 139 d~~~v~~~I~~Ri~~~~glp~~~~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~~ 217 (286)
. .+.+..|.++++++++.+. ...-|..|..|+ .-.+|.|....- ..+.-++|+-+ |+...|-..
T Consensus 80 w-p~~L~~l~~~~~~~~g~~~---n~~LvN~Y~~G~d~i~~H~D~~~~~----~~~~~IasvSL-------G~~~~f~~~ 144 (204)
T 3s57_A 80 W-IPVLERIRDHVSGVTGQTF---NFVLINRYKDGSDHICEHRDDEREL----APGSPIASVSF-------GASRDFVFR 144 (204)
T ss_dssp C-CHHHHHHHHHHHHHHCCCC---SEEEEEEESSTTCCEEEECCCCTTB----CTTCCEEEEEE-------ESCEEEEEE
T ss_pred C-CHHHHHHHHHHHHHhCCCC---ceeEEEEECCCCCcccceecChhhc----cCCCcEEEEEC-------CCceEEEEE
Confidence 1 2578889999988877533 345788999999 899999974321 12344555543 444444321
Q ss_pred CCcccCCCCCccccccEEEecCcccEEEeeecCCCCCCCCCCcccccccc--cceEEEEEe
Q 023180 218 NGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVI--KGEKWVATK 276 (286)
Q Consensus 218 ~~~~~~~~~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~~ 276 (286)
.......+ .......+.+.-..|+++++.- ..-....|+.-+.. .|.++.+|-
T Consensus 145 ~~~~~~~~-~~~~~~~~~~~L~~GsllvM~g-----~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 145 HKDSRGKS-PSRRVAVVRLPLAHGSLLMMNH-----PTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp EGGGCSSS-CSCCCCCEEEEECTTEEEEEET-----THHHHEEEEECCCTTCCSCEEEEEE
T ss_pred EcCCCccc-cccCCceEEEECCCCCEEEECc-----hhhheeEeeccccCCCCCCEEEEEe
Confidence 10000000 0001135789999999999952 22223457776654 267777763
No 15
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=95.97 E-value=0.016 Score=51.59 Aligned_cols=93 Identities=17% Similarity=0.112 Sum_probs=59.4
Q ss_pred CCccccCccCCCCCCCCCCCCceEEEEEEeccCCC-CCcceec-ccCCCcccC------C----CC--------Cccccc
Q 023180 173 GQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVE-EGGETMF-PFENGIFLD------S----GY--------DYKKCI 232 (286)
Q Consensus 173 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~-eGGeT~F-p~~~~~~~~------~----~~--------~~~~~~ 232 (286)
|+...+|.|...... ....+.+|+.|+|.|+. ++|.|.| |........ . +. .+....
T Consensus 150 ~~~~~wHqD~~~~~~---~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T 2opw_A 150 GGEVSPHQDASFLYT---EPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSL 226 (291)
T ss_dssp BCCEEEECGGGTSCE---ESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGGG
T ss_pred CCCcCCeeCCccccc---CCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcCC
Confidence 455899999854211 11237899999999985 5677766 433211110 0 00 112234
Q ss_pred cEEEecCcccEEEeeecCCCCCCCCCCcccccccccc-eEEEEEec
Q 023180 233 GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG-EKWVATKW 277 (286)
Q Consensus 233 ~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~W 277 (286)
.+.+.-++|++|||. ..++|++.|..+. .+++++.-
T Consensus 227 ~v~~~~~aGd~~~f~---------~~~~H~s~~N~s~~~R~~~~~~ 263 (291)
T 2opw_A 227 FVPTPVQRGALVLIH---------GEVVHKSKQNLSDRSRQAYTFH 263 (291)
T ss_dssp CEEECBCTTCEEEEE---------TTCEEEECCBCSSSCCCEEEEE
T ss_pred eeecccCCCcEEEEc---------CCceecCCCCCCCCceEEEEEE
Confidence 678899999999995 4899999998764 56655443
No 16
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=95.77 E-value=0.055 Score=50.19 Aligned_cols=142 Identities=15% Similarity=0.162 Sum_probs=72.8
Q ss_pred eecCCCEEEecCCCCHHHHHHHHHHHhcCCCcceeeecCCceee-------eecceeeccceeec----CCCChHHHHHH
Q 023180 78 LSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVE-------STKGTRTSSGTFIS----ASEDKTGILEL 146 (286)
Q Consensus 78 ls~~P~I~~~~nfLs~eEC~~li~~a~~~l~~s~v~~~~G~~~~-------~~~~~RtS~~~~l~----~~ed~~~v~~~ 146 (286)
.+.-|.+.+++||||++|.+.|++... +.+..+.. .|.... --..+|-+...... ....+ +.+..
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~i~--w~~~~~~~-~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P-~~L~~ 182 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLESVD--WTEDTDNQ-NSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLP-DICES 182 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTTCC-------------------CEEECCC------------------CCC-HHHHH
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHhcc--cCCccccc-cCcccccCceEEEECCcccccccccccCCCCCcCcC-HHHHH
Confidence 456778999999999999998876554 21111100 011000 00111111111100 00112 34667
Q ss_pred HHHHHHHhhCCCCCCCCcceEEecCCCCccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecccCCCcccCCCC
Q 023180 147 IEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGY 226 (286)
Q Consensus 147 I~~Ri~~~~glp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~~~~~~~~~~~ 226 (286)
|.+|+... ++........-|..|.+|+.-.+|.|.... -+..++|+-+ |+..+|-.....
T Consensus 183 l~~r~~~~-~~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~------~~~~I~slSL-------G~~~~f~f~~~~------ 242 (345)
T 3tht_A 183 FLEKWLRK-GYIKHKPDQMTINQYEPGQGIPAHIDTHSA------FEDEIVSLSL-------GSEIVMDFKHPD------ 242 (345)
T ss_dssp HHHHHHHH-TSCSSCCSEEEEEEECTTCCEEEECCCTTT------BCSCEEEEEE-------SSCEEEEEECTT------
T ss_pred HHHHHHhc-ccCCCCCCEEEEEEecCCCCEeeccCCchh------cCCeEEEEEC-------CCceeEEEccCC------
Confidence 77777642 332223345678889999999999998532 1245555542 455555432110
Q ss_pred CccccccEEEecCcccEEEee
Q 023180 227 DYKKCIGLKVKPRRGDGLLFY 247 (286)
Q Consensus 227 ~~~~~~~l~V~P~~G~allF~ 247 (286)
...+.|.-..|+++++.
T Consensus 243 ----~~~~~l~L~~gsLlvM~ 259 (345)
T 3tht_A 243 ----GIAVPVMLPRRSLLVMT 259 (345)
T ss_dssp ----SCEEEEEECTTEEEEEC
T ss_pred ----CceEEEEcCCCcEEEEC
Confidence 02467777788888874
No 17
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=95.64 E-value=0.34 Score=41.70 Aligned_cols=108 Identities=21% Similarity=0.218 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcceEEecCCCCccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecccCCCccc
Q 023180 143 ILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFL 222 (286)
Q Consensus 143 v~~~I~~Ri~~~~glp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~~~~~~~ 222 (286)
.+..+.+++....|++...-+..-|..|.+|+.-.+|.|..... + +..++|+-+ |+...|-......
T Consensus 85 ~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~-~----~~pI~svSL-------G~~~~f~f~~~~~- 151 (211)
T 3i3q_A 85 SFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPD-L----RAPIVSVSL-------GLPAIFQFGGLKR- 151 (211)
T ss_dssp HHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSC-T----TSCEEEEEE-------ESCEEEEECCSST-
T ss_pred HHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccc-c----CCCEEEEEC-------CCCeEEEEecccC-
Confidence 56778888888777643333557788899999999999963221 1 234666654 5666665432110
Q ss_pred CCCCCccccccEEEecCcccEEEeeecCCCCCCCCCCccccccccc-------ceEEEEEe
Q 023180 223 DSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK-------GEKWVATK 276 (286)
Q Consensus 223 ~~~~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~-------G~K~i~~~ 276 (286)
.....+|.-..|+++++. |..- ...|+..++.. +.++.+|.
T Consensus 152 -------~~~~~~i~L~~GsllvM~-----G~~r-~~~H~I~~~~~~~~p~~~~~RIsLTF 199 (211)
T 3i3q_A 152 -------NDPLKRLLLEHGDVVVWG-----GESR-LFYHGIQPLKAGFHPLTIDCRYNLTF 199 (211)
T ss_dssp -------TSCCEEEEECTTCEEEEC-----GGGT-TCCEEECCCCCCCBTTTBTCEEEEEE
T ss_pred -------CCceEEEECCCCCEEEEC-----chHH-ceEeccCcccCCcCCCCCCCEEEEEe
Confidence 013578999999999994 2222 25799988876 34777764
No 18
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=81.96 E-value=7.3 Score=35.16 Aligned_cols=87 Identities=17% Similarity=0.170 Sum_probs=57.0
Q ss_pred cceEEecCCCC------ccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecccCCCcccCCCCCccccccEEEe
Q 023180 164 AFNVLRYEIGQ------KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVK 237 (286)
Q Consensus 164 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l~V~ 237 (286)
.+++.+|.+.. -..+|.|.. .+|+|+ .|...||=-+... ...+.|+
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~--qd~~v~GLQV~~~--------------g~Wi~V~ 207 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG------------GIILLF--QDDKVSGLQLLKD--------------GQWIDVP 207 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS------------SEEEEE--ESSSCCCEEEEET--------------TEEEECC
T ss_pred eeEEEecCCCcccccccccccccCCC------------ceEEEE--ecCCCCeeeEeeC--------------CeEEEcc
Confidence 47899998632 367787753 478885 4444567445432 1468999
Q ss_pred cCcccEEEeee----cCCCCCCCCCCcccccccccceEEEEEeccc
Q 023180 238 PRRGDGLLFYS----LFPNGTIDRTSLHGSCPVIKGEKWVATKWIR 279 (286)
Q Consensus 238 P~~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~ 279 (286)
|..|..||--- ...|| .-..+.|++.....+.++.+.-++.
T Consensus 208 p~pgalvVNiGD~l~~~SnG-~~kS~~HRVv~~~~~~R~Sia~F~~ 252 (319)
T 1w9y_A 208 PMRHSIVVNLGDQLEVITNG-KYKSVMHRVIAQKDGARMSLASFYN 252 (319)
T ss_dssp CCTTCEEEEECHHHHHHTTT-SSCCCCEEECCCSSSCCEEEEEEEE
T ss_pred cCCCcEEEEhHHHHHHHhCC-eeecccceecCCCCCCceEEEEEec
Confidence 99998887420 11233 3468899998766678898877664
No 19
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=75.80 E-value=2.9 Score=36.89 Aligned_cols=55 Identities=25% Similarity=0.321 Sum_probs=37.2
Q ss_pred ceEEEEEEeccCCCCCcceecccCCCcccCCCCCccccccEEEe-cCcccEEEeeecCCCCCCCCCCccccccccc
Q 023180 194 QRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVK-PRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK 268 (286)
Q Consensus 194 ~R~~T~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l~V~-P~~G~allF~n~~~~g~~D~~~lH~g~PV~~ 268 (286)
.-+++++|--+++ +||+|........ ....++ -..|+++++. |.+.+|.+.||..
T Consensus 171 d~v~v~lv~R~Ni-~GGet~I~~~~~~-----------~~~~~~l~~p~d~llv~--------D~~~~H~vTpI~~ 226 (254)
T 3pl0_A 171 DFVAVVFIGRQGV-RGGETRVFDAAGP-----------QGVRFTLEQPWTVLLLD--------DQQVIHESTPLLP 226 (254)
T ss_dssp SEEEEEEEEEESE-EECCEEEEETTSS-----------EEEEECCCSTTCEEEEE--------TTTEEEEECCEEE
T ss_pred CEEEEEEecCCcc-ccceEEEEcCCCC-----------ccceeEecCCCcEEEEe--------CCcccCCCCcccc
Confidence 4467777777666 5888877653221 233433 3678888884 6789999999974
No 20
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=71.81 E-value=25 Score=32.08 Aligned_cols=87 Identities=15% Similarity=0.147 Sum_probs=56.5
Q ss_pred cceEEecCCC------CccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecccCCCcccCCCCCccccccEEEe
Q 023180 164 AFNVLRYEIG------QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVK 237 (286)
Q Consensus 164 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l~V~ 237 (286)
.+++.+|.+. -...+|+|.. .+|+|+. |. .||=-+... + ..+.|+
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d~-v~GLQV~~~--g------------~Wi~V~ 261 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS------------ALTFILH--NM-VPGLQLFYE--G------------KWVTAK 261 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS------------SEEEEEE--CS-CCCEEEEET--T------------EEEECC
T ss_pred eeeeeecCCCCCcccccCcCCccCCC------------eEEEEEE--cC-CCCeEEecC--C------------cEEECc
Confidence 4788999753 2367788764 4788855 42 566445431 1 468999
Q ss_pred cCcccEEEeee----cCCCCCCCCCCcccccccccceEEEEEecccc
Q 023180 238 PRRGDGLLFYS----LFPNGTIDRTSLHGSCPVIKGEKWVATKWIRD 280 (286)
Q Consensus 238 P~~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~ 280 (286)
|..|..||--- ...|| .-..++|++.......++.+.-+++-
T Consensus 262 p~pgalvVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~R~Sia~F~~P 307 (356)
T 1gp6_A 262 CVPDSIVMHIGDTLEILSNG-KYKSILHRGLVNKEKVRISWAVFCEP 307 (356)
T ss_dssp CCTTCEEEEECHHHHHHTTT-SSCCCCEEECCCSSCCEEEEEEEEEC
T ss_pred CCCCeEEEEeccHHHHhcCC-EeeccCceecCCCCCCEEEEEEeecC
Confidence 99998887421 11233 34688999976555689988777653
No 21
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=64.68 E-value=40 Score=30.00 Aligned_cols=90 Identities=13% Similarity=0.156 Sum_probs=55.5
Q ss_pred CCcceEEecCCC---------C-ccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCc--ceecccCCCcccCCCCCcc
Q 023180 162 GEAFNVLRYEIG---------Q-KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGG--ETMFPFENGIFLDSGYDYK 229 (286)
Q Consensus 162 ~E~lqv~rY~~G---------~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGG--eT~Fp~~~~~~~~~~~~~~ 229 (286)
...+++.+|.+. + ...+|+|.. .+|+|+. |...|| .+..-. .+
T Consensus 156 ~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g------------~lTlL~q--d~~v~G~~~LqV~~-~g---------- 210 (311)
T 1dcs_A 156 EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLS------------MVTLIQQ--TPCANGFVSLQAEV-GG---------- 210 (311)
T ss_dssp CCEEEEEEECC-----------CCEEEEEECS------------SEEEEEE--ECCTTCCCCEEEEE-TT----------
T ss_pred chhhheecCCCCCcccccCccccccccccCCC------------eEEEEec--CCCCCCceeEEEEe-CC----------
Confidence 345889999752 1 267888864 4788865 423455 243322 11
Q ss_pred ccccEEEecCcccEEEeee----cCCCCCCCCCCcccccccc-----cceEEEEEeccc
Q 023180 230 KCIGLKVKPRRGDGLLFYS----LFPNGTIDRTSLHGSCPVI-----KGEKWVATKWIR 279 (286)
Q Consensus 230 ~~~~l~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~-----~G~K~i~~~Wi~ 279 (286)
..+.|+|.+|..||--- ...|| .-..+.|++.... ...++.+.-+++
T Consensus 211 --~W~~V~p~pg~lvVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~ 266 (311)
T 1dcs_A 211 --AFTDLPYRPDAVLVFCGAIATLVTGG-QVKAPRHHVAAPRRDQIAGSSRTSSVFFLR 266 (311)
T ss_dssp --EEEECCCCTTCEEEEECHHHHHHTTS-CSCCCCEEECCC----CTTCCEEEEEEEEC
T ss_pred --EEEeCcCCCCeEEEEHHHHHHHHhCC-cccCCCceEeCCCcccCCCCCeEEEEEEEc
Confidence 46899999998887420 11234 3458899997654 457898877765
No 22
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=60.21 E-value=32 Score=30.57 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=60.9
Q ss_pred HHHHHHHhhCCCCC--------CCCcceEEecCCC------CccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcce
Q 023180 147 IEHKIARATMLPQT--------HGEAFNVLRYEIG------QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGET 212 (286)
Q Consensus 147 I~~Ri~~~~glp~~--------~~E~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT 212 (286)
|.+-++...|++.. ....+++.+|.+. -...+|+|.. .+|+|+ .| ..||==
T Consensus 145 ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g------------~lTlL~--qd-~v~GLq 209 (312)
T 3oox_A 145 VLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDIN------------TITLLL--GA-EEGGLE 209 (312)
T ss_dssp HHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCS------------SEEEEE--CC-TTSCEE
T ss_pred HHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCc------------eEEEEe--Ec-CcCceE
Confidence 33444445677643 1235788899863 2356788764 478874 44 245643
Q ss_pred ecccCCCcccCCCCCccccccEEEecCcccEEEeee----cCCCCCCCCCCcccccccc----cceEEEEEeccc
Q 023180 213 MFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYS----LFPNGTIDRTSLHGSCPVI----KGEKWVATKWIR 279 (286)
Q Consensus 213 ~Fp~~~~~~~~~~~~~~~~~~l~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~----~G~K~i~~~Wi~ 279 (286)
+....+ ..+.|+|..|..||--- ...|| .-..+.|++.... ...+|.+.-+++
T Consensus 210 V~~~~g-------------~W~~V~p~pg~~vVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~~~~~R~Sia~F~~ 270 (312)
T 3oox_A 210 VLDRDG-------------QWLPINPPPGCLVINIGDMLERLTNN-VLPSTVHRVVNPPPERRGVPRYSTPFFLH 270 (312)
T ss_dssp EECTTS-------------CEEECCCCSSCEEEEECHHHHHHTTT-SSCCCCEEECCCCGGGTTSCEEECCEEEC
T ss_pred EECCCC-------------cEEECCCCCCeEEEEhHHHHHHHhCC-eecCCCceEeCCCccCCCCCEEEEEEEec
Confidence 433211 36899999998887420 11234 3458899986432 235888876654
No 23
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=55.40 E-value=11 Score=32.75 Aligned_cols=41 Identities=17% Similarity=0.011 Sum_probs=34.5
Q ss_pred ccEEEecCcccEEEeeecCCCCCCCCCCccccccccc--ceEEEEEecccc
Q 023180 232 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK--GEKWVATKWIRD 280 (286)
Q Consensus 232 ~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~--G~K~i~~~Wi~~ 280 (286)
..+.++=++|++|+|.| .+++|+..+-.. +.++..+.|+.+
T Consensus 230 ~~~~~~w~~GD~~i~DN--------~~vlH~R~~f~~~~~~R~l~R~~i~g 272 (273)
T 1nx8_A 230 YYYKHFWEDGDLLIMDN--------RRVIHEREEFNDDDIVRRLYRGQTAD 272 (273)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCCCCTTCEEEEEEEEEEC
T ss_pred eEEEeEecCCCEEEEEC--------CeeeeccccCCCCCCCeEEEEeeccc
Confidence 46788899999999998 699999999764 478999988753
No 24
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=50.60 E-value=12 Score=33.91 Aligned_cols=41 Identities=20% Similarity=0.357 Sum_probs=34.3
Q ss_pred ccEEEecCcccEEEeeecCCCCCCCCCCcccccccc---cc-eEEEEEecccc
Q 023180 232 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVI---KG-EKWVATKWIRD 280 (286)
Q Consensus 232 ~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~---~G-~K~i~~~Wi~~ 280 (286)
..+.++=++|++++|.| .+++|+..+-. .| .+|..+.|+..
T Consensus 295 ~~~~~~w~pGDv~i~DN--------r~vlH~R~~f~~~~~~~~R~L~R~~i~~ 339 (358)
T 2wbq_A 295 SLYELVLDQGDVAFIDN--------RRAVHGRRAFQPRYDGRDRWLKRINITR 339 (358)
T ss_dssp HCEEEECCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEES
T ss_pred hceEEeecCCCEEEEeC--------cccccCCCCCCCCCCCCCceEEEEEEec
Confidence 35788899999999998 69999988865 24 79999999864
No 25
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=49.26 E-value=12 Score=34.03 Aligned_cols=40 Identities=13% Similarity=0.378 Sum_probs=33.9
Q ss_pred cEEEecCcccEEEeeecCCCCCCCCCCccccccccc----ceEEEEEecccc
Q 023180 233 GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK----GEKWVATKWIRD 280 (286)
Q Consensus 233 ~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~----G~K~i~~~Wi~~ 280 (286)
.+.++=++|+++||.| .+++|+..+... +.+|..+.|+..
T Consensus 291 ~~~~~w~pGDivi~DN--------~~vlH~R~~f~d~~~~~~R~L~R~~i~~ 334 (357)
T 2og5_A 291 AVTHRLLPGELAIVDN--------RVTVHGRTEFTPRYDGTDRWLQRTFVLT 334 (357)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCSCEEEEEEEES
T ss_pred eEEEeeCCCCEEEEeC--------CccccCCCCCCCCCCCCCcEEEEEEEcc
Confidence 5788889999999998 699999988752 479999999864
No 26
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=49.11 E-value=38 Score=30.37 Aligned_cols=103 Identities=13% Similarity=0.061 Sum_probs=61.6
Q ss_pred HHHHHHHHhhCCCCC--------CCCcce--EEecC------C----------CCccccCccCCCCCCCCCCCCceEEEE
Q 023180 146 LIEHKIARATMLPQT--------HGEAFN--VLRYE------I----------GQKYDSHYDAFNPAEYGPQMSQRLASF 199 (286)
Q Consensus 146 ~I~~Ri~~~~glp~~--------~~E~lq--v~rY~------~----------G~~y~~H~D~~~~~~~~~~~~~R~~T~ 199 (286)
.|.+-|+...|++.. ....++ +.+|. + .-...+|.|.. .+|+
T Consensus 155 ~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g------------~lTl 222 (331)
T 1odm_A 155 ALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVS------------LITV 222 (331)
T ss_dssp HHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSS------------SEEE
T ss_pred HHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCC------------eEEE
Confidence 344444455677643 223478 99998 4 11366787764 4788
Q ss_pred EEeccCCCCCcceecccCCCcccCCCCCccccccEEEecCcccEEEeee----cCCCCCCCCCCcccccccccceEEEEE
Q 023180 200 LLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYS----LFPNGTIDRTSLHGSCPVIKGEKWVAT 275 (286)
Q Consensus 200 liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~ 275 (286)
|+. |. .||=-+... +. .+.|+|.+|..||--- ...|| .-..+.|++... ...++.+.
T Consensus 223 L~q--d~-v~GLQV~~~-------------~g-Wi~V~p~pgalvVNiGD~l~~~TnG-~~kS~~HRVv~~-~~~R~Sia 283 (331)
T 1odm_A 223 LYQ--SN-VQNLQVETA-------------AG-YQDIEADDTGYLINCGSYMAHLTNN-YYKAPIHRVKWV-NAERQSLP 283 (331)
T ss_dssp EEE--CS-SCCEEEEET-------------TE-EEECCCCTTSEEEEECHHHHHHTTT-SSCCCCEEEECC-CSCEEEEE
T ss_pred Eee--CC-CCCEEEEcC-------------CC-eEECCCCCCeEEEEccHHHHHHhCC-EeeCCCceeCCC-CCCEEEEE
Confidence 855 42 456444422 12 5889999998887420 11233 345889998532 45789887
Q ss_pred eccc
Q 023180 276 KWIR 279 (286)
Q Consensus 276 ~Wi~ 279 (286)
-+++
T Consensus 284 ~F~~ 287 (331)
T 1odm_A 284 FFVN 287 (331)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7765
No 27
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=47.96 E-value=27 Score=25.63 Aligned_cols=48 Identities=19% Similarity=0.191 Sum_probs=32.9
Q ss_pred EEeccCCCCCcceecccCCCcccCCCCCccccccEEEecCcccEEEeeecCCCCCCCCCCcccccccccc
Q 023180 200 LLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 269 (286)
Q Consensus 200 liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G 269 (286)
+.-++|..+|+...|.... ..+.|--..|....|.| ...|.|+|+..|
T Consensus 5 v~~~~~l~~g~~~~~~~~g-------------~~i~v~r~~g~~~A~~~---------~CpH~g~~L~~g 52 (106)
T 3dqy_A 5 ILRQGDLPPGEMQRYEGGP-------------EPVMVCNVDGEFFAVQD---------TCTHGDWALSDG 52 (106)
T ss_dssp EEEGGGSCTTCEEEECCSS-------------SCEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEHHHCCCCCEEEEEECC-------------EEEEEEEECCEEEEEeC---------cCCCCCCCCcCc
Confidence 4456777777766665321 23444447888888877 789999999876
No 28
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=45.29 E-value=22 Score=30.84 Aligned_cols=41 Identities=10% Similarity=0.042 Sum_probs=34.8
Q ss_pred cEEEecCcccEEEeeecCCCCCCCCCCcccccccc-cceEEEEEeccccc
Q 023180 233 GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVI-KGEKWVATKWIRDQ 281 (286)
Q Consensus 233 ~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~Wi~~~ 281 (286)
.+.++=++|++++|.| .+++|+..+-. .+.++..+.|+...
T Consensus 235 ~~~~~w~~GDv~i~DN--------~~~lH~r~~f~~~~~R~l~R~~i~~d 276 (283)
T 1otj_A 235 QVRWRWQPNDIAIWDN--------RVTQHYANADYLPQRRIMHRATILGD 276 (283)
T ss_dssp EEEECCCTTCEEEEET--------TSEEEEECCCCTTSCEEEEEEEEECC
T ss_pred EEEeeEcCCCEEEEEC--------cceeecccCCCCCCceEEEEEEEecC
Confidence 5788889999999998 69999999976 45899999998653
No 29
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=40.86 E-value=19 Score=32.10 Aligned_cols=41 Identities=24% Similarity=0.450 Sum_probs=34.2
Q ss_pred ccEEEecCcccEEEeeecCCCCCCCCCCccccccccc---c-eEEEEEecccc
Q 023180 232 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK---G-EKWVATKWIRD 280 (286)
Q Consensus 232 ~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~---G-~K~i~~~Wi~~ 280 (286)
..+.++=++|++|+|.| .+++|+-.+... | .+|..+.|+..
T Consensus 258 ~~~~~~w~~GDv~i~DN--------~~~lH~R~~f~~~~~~~~R~L~R~~v~~ 302 (324)
T 1ds1_A 258 VTEAVYLEPGDLLIVDN--------FRTTHARTPFSPRWDGKDRWLHRVYIRT 302 (324)
T ss_dssp TCEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEEC
T ss_pred ccEEEeeCCCCEEEEeC--------CceeecCCccCCCCCCCCcEEEEEEEec
Confidence 46889999999999998 699999888753 3 79999999853
No 30
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=36.03 E-value=24 Score=32.55 Aligned_cols=40 Identities=18% Similarity=0.184 Sum_probs=34.0
Q ss_pred cEEEecCcccEEEeeecCCCCCCCCCCccccccccc--c-eEEEEEecccc
Q 023180 233 GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK--G-EKWVATKWIRD 280 (286)
Q Consensus 233 ~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~--G-~K~i~~~Wi~~ 280 (286)
.+.++=++|++++|.| .+++|+..+-.. | .++....|+..
T Consensus 328 ~~~~~~~pGd~vi~DN--------r~~lH~R~~f~~~~~~~R~L~r~yi~~ 370 (388)
T 3o2g_A 328 KFTFKMNPGDVITFDN--------WRLLHGRRSYEAGTEISRHLEGAYADW 370 (388)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCSSCSCEEEEEEECH
T ss_pred EEEEEcCCCcEEEEeC--------cEEeeCCCCcCCCCCCCEEEEEEEEcc
Confidence 4888999999999998 699999998763 4 79999999853
No 31
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=34.73 E-value=93 Score=27.10 Aligned_cols=88 Identities=15% Similarity=0.124 Sum_probs=54.1
Q ss_pred CcceEEecCCCC--------ccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecccCCCcccCCCCCccccccE
Q 023180 163 EAFNVLRYEIGQ--------KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGL 234 (286)
Q Consensus 163 E~lqv~rY~~G~--------~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l 234 (286)
..+++.+|.+.. ...+|+|.. .+|+|+ .| ..||==+....+ ..+
T Consensus 150 ~~lr~~~YP~~~~~~~~~~~g~~~HtD~g------------~lTlL~--qd-~~~GLqV~~~~g-------------~W~ 201 (280)
T 3on7_A 150 TLLRILHYPPMTGDEEMGAIRAAAHEDIN------------LITVLP--TA-NEPGLQVKAKDG-------------SWL 201 (280)
T ss_dssp CEEEEEEECCCCTTCCCCSEEEEEECCCS------------SEEEEE--CC-SCCCEEEECTTS-------------CEE
T ss_pred ceEEEEECCCCCCccccCcccccCCCCCC------------eEEEEE--ec-CCCCeEEEcCCC-------------CEE
Confidence 347899998531 256788864 478775 34 346644442211 468
Q ss_pred EEecCcccEEEeee----cCCCCCCCCCCcccccccc----cceEEEEEeccc
Q 023180 235 KVKPRRGDGLLFYS----LFPNGTIDRTSLHGSCPVI----KGEKWVATKWIR 279 (286)
Q Consensus 235 ~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~----~G~K~i~~~Wi~ 279 (286)
.|+|.+|..|+--- ...|| .-..+.|.+.... ...+|.+.-+++
T Consensus 202 ~V~p~pg~~vVNiGD~l~~~Tng-~~kS~~HRVv~~~~~~~~~~R~Si~~F~~ 253 (280)
T 3on7_A 202 DVPSDFGNIIINIGDMLQEASDG-YFPSTSHRVINPEGTDKTKSRISLPLFLH 253 (280)
T ss_dssp ECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEEECCTTCCTTSCEEECCEEEC
T ss_pred ECcCCCCEEEEEcChHHHHHhCC-cccCCCceEeCCCCCCCCCCeEEEEEEEc
Confidence 99999999888421 11234 3568899975542 347888876654
No 32
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=34.73 E-value=45 Score=25.19 Aligned_cols=51 Identities=14% Similarity=0.082 Sum_probs=35.0
Q ss_pred EEEEEeccCCCCCcceecccCCCcccCCCCCccccccEEEecCcccEEEeeecCCCCCCCCCCcccccccccc
Q 023180 197 ASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 269 (286)
Q Consensus 197 ~T~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G 269 (286)
+..+.-++|..+|+...|.... ..+.|--..|....|.| ...|.|+|+..|
T Consensus 11 w~~v~~~~el~~g~~~~~~~~g-------------~~v~v~r~~g~~~A~~n---------~CpH~g~~L~~G 61 (121)
T 3gce_A 11 PVRVATLDQLKPGVPTAFDVDG-------------DEVMVVRDGDSVYAISN---------LCSHAEAYLDMG 61 (121)
T ss_dssp CEEEEEGGGSCTTCCEEEEETT-------------EEEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHHHCCCCCEEEEEECC-------------EEEEEEEECCEEEEEeC---------cCCCCCCCCCCC
Confidence 4456678888888777775421 22333225788888876 789999999877
No 33
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=34.07 E-value=12 Score=35.69 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=48.2
Q ss_pred CCceEEEEEEeccCC--CCCcceecccCCC-------cc-----cCCC-------CC--ccc------cccEEEec--Cc
Q 023180 192 MSQRLASFLLYLSDV--EEGGETMFPFENG-------IF-----LDSG-------YD--YKK------CIGLKVKP--RR 240 (286)
Q Consensus 192 ~~~R~~T~liYLndv--~eGGeT~Fp~~~~-------~~-----~~~~-------~~--~~~------~~~l~V~P--~~ 240 (286)
+.-|.+==.+=|++. .+||=.+.| ... +. .+.+ .. ..+ ...+...| ++
T Consensus 295 s~FR~fQGwlaLS~~gP~eGtL~v~P-~~~atAY~LLRpFf~~~~d~~~~Ga~pg~~q~~~~~~HP~L~~~mv~iP~veP 373 (461)
T 2dbn_A 295 SVFRTFQGWTALSDMLPGQGLLHVVP-IPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEA 373 (461)
T ss_dssp CSCCSEEEEEESSCBCTTSSCEEECS-CTTHHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHHTTCEECCCBCT
T ss_pred cccceeeeehhccCCCCCCCcEEEee-chhhHHHHhhhhhhccCCcccccCCCCCcccCCCcccCCcccCceeeCCCCCC
Confidence 455666677778876 468877888 321 00 0111 00 011 02334555 68
Q ss_pred ccEEEeeecCCCCCCCCCCcccccccccceEEEEEeccc
Q 023180 241 GDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIR 279 (286)
Q Consensus 241 G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~ 279 (286)
|+.|+|.+ ++.|++.|+..|..+....+|-
T Consensus 374 GD~V~WH~---------D~iH~V~~~h~g~~~s~V~YIp 403 (461)
T 2dbn_A 374 GDSVWWHC---------DVIHSVAPVENQQGWGNVMYIP 403 (461)
T ss_dssp TCEEEEET---------TCCEEECCBSSCCSCCCEEECC
T ss_pred CCEEEEcC---------CCccccccCCCCCcceeEEEec
Confidence 99999965 8999999999998776665553
No 34
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=34.04 E-value=31 Score=25.98 Aligned_cols=25 Identities=36% Similarity=0.674 Sum_probs=20.9
Q ss_pred EecCcccEEEeeecCCCCCCCCCCcccccccccceEEEEEeccccc
Q 023180 236 VKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQ 281 (286)
Q Consensus 236 V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 281 (286)
.+|++|+.|+| .|..|+.+.|-+..
T Consensus 62 YrP~r~D~Vv~---------------------~Gk~y~Vtr~~~~n 86 (102)
T 2pp6_A 62 VIPRRGDRVVL---------------------RGSEFTVTRIRRFN 86 (102)
T ss_dssp CCCCTTCEEEE---------------------TTEEEEEEEEEEET
T ss_pred cccCCCCEEEE---------------------cCcEEEEEEEEEEC
Confidence 69999999999 48899999886543
No 35
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=33.28 E-value=74 Score=23.17 Aligned_cols=50 Identities=18% Similarity=0.222 Sum_probs=32.7
Q ss_pred EEEEEeccCCCCCcceecccCCCcccCCCCCcccccc-E-EEecCcccEEEeeecCCCCCCCCCCcccccccccc
Q 023180 197 ASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIG-L-KVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 269 (286)
Q Consensus 197 ~T~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~-l-~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G 269 (286)
+..+.-++|..+|+...|.... .. + .++- .|....|.| ...|.|+|+..|
T Consensus 4 w~~v~~~~~l~~g~~~~~~~~g-------------~~~v~v~r~-~g~~~A~~~---------~CpH~g~~L~~g 55 (108)
T 2i7f_A 4 KLRLCQVASVKDGEPVAVYQEK-------------MPALAVYNV-DGEVFVTDN---------LCTHGNAMLTDG 55 (108)
T ss_dssp EEEEEEGGGCBTTBCEEECCTT-------------SSCEEEEEE-TTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHhHcCCCCeEEEEECC-------------eeEEEEEEE-CCEEEEEeC---------cCCCCCCCCCCC
Confidence 3445567788777766665321 12 3 3333 788888876 799999999876
No 36
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=32.55 E-value=1.1e+02 Score=22.96 Aligned_cols=55 Identities=7% Similarity=0.024 Sum_probs=35.6
Q ss_pred ceEEEEEEeccCCCCCcceecccCCCcccCCCCCccccccE-EEecCcccEEEeeecCCCCCCCCCCcccccccccc
Q 023180 194 QRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGL-KVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 269 (286)
Q Consensus 194 ~R~~T~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l-~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G 269 (286)
-+.+.-+.-++|..+|+...+-...+ ..+ -++...|..-.+.| ...|.+.|+.+|
T Consensus 7 ~~~W~~Vc~~~dL~~g~~~~~~~~~G------------~~v~l~r~~dG~v~A~~n---------~CpH~ga~L~~~ 62 (119)
T 4aiv_A 7 IQVWTTACAYDHLIPGRGVGVLLDDG------------SQVALFRLDDGSVHAVGN---------VDPFSGAAVMSR 62 (119)
T ss_dssp EEEEEEEEEGGGSCTTCCEEEECTTS------------CEEEEEECTTSCEEEEES---------BCTTTCCBCGGG
T ss_pred ccceeEeeEHHHcCCCCceEEEEcCC------------cEEEEEEcCCCeEEEEEC---------CCCCCCCccccC
Confidence 35677788899988776555433211 123 34555677666665 899999998765
No 37
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=30.94 E-value=76 Score=23.23 Aligned_cols=50 Identities=16% Similarity=0.134 Sum_probs=32.0
Q ss_pred EEeccCCCCCcceeccc-CCCcccCCCCCccccccEEEecCcccEEEeeecCCCCCCCCCCcccccccccce
Q 023180 200 LLYLSDVEEGGETMFPF-ENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGE 270 (286)
Q Consensus 200 liYLndv~eGGeT~Fp~-~~~~~~~~~~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~ 270 (286)
+.-++|..+|+...|.. ... .-+.++-..|....|.| ...|.|+|+..|.
T Consensus 5 v~~~~~l~~g~~~~~~~~~g~------------~v~v~r~~~g~~~A~~~---------~CpH~g~~L~~g~ 55 (111)
T 1vm9_A 5 ICSLDDIWVGEMETFETSDGT------------EVLIVNSEEHGVKAYQA---------MCPHQEILLSEGS 55 (111)
T ss_dssp EEEGGGSCTTCEEEEECTTCC------------EEEEEEETTTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEHHHCCCCCeEEEEEcCCC------------EEEEEEeCCCeEEEEeC---------cCCCCCcCCCCce
Confidence 34466777776555543 210 12344556788888876 7999999988763
No 38
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=29.92 E-value=94 Score=22.32 Aligned_cols=50 Identities=22% Similarity=0.110 Sum_probs=32.3
Q ss_pred EEEeccCCCCCcceecccCCCcccCCCCCccccccEEEecCcccEEEeeecCCCCCCCCCCcccccccccce
Q 023180 199 FLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGE 270 (286)
Q Consensus 199 ~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~ 270 (286)
.+.-++|..+|+...|..... .-+.++ ..|....|.| ...|.|+|+..|.
T Consensus 6 ~v~~~~~l~~g~~~~~~~~g~------------~i~v~r-~~g~~~A~~~---------~CpH~g~~L~~g~ 55 (103)
T 2qpz_A 6 EAVALSDILEGDVLGVTVEGK------------ELALYE-VEGEIYATDN---------LCTHGSARMSDGY 55 (103)
T ss_dssp EEEETTSCCTTCEEEEEETTE------------EEEEEE-ETTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEEHHHcCCCCEEEEEECCE------------EEEEEE-ECCEEEEECC---------cCCCCCCCCCCCe
Confidence 344577777776666543210 123445 7788888876 7899999987763
No 39
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=29.92 E-value=30 Score=30.80 Aligned_cols=34 Identities=29% Similarity=0.308 Sum_probs=26.8
Q ss_pred ccEEEecCcccEEEeeecCCCCCCCCCCcccccccccceEEEE
Q 023180 232 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVA 274 (286)
Q Consensus 232 ~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~ 274 (286)
..+.++=++|++|+|.| .+++|+..|- .|.+.++
T Consensus 292 ~~~~~~w~~GDv~i~DN--------~~~lH~R~~f-~g~rR~l 325 (330)
T 2q4a_A 292 ECVAVPWQRGDVLLIDN--------WAVLHSRRPF-DPPRRVL 325 (330)
T ss_dssp HCBCCCCCTTCEEEEET--------TTEEEEECCE-ESCCEEE
T ss_pred hEeecCCCCCCEEEEec--------ccccccCCCC-CCCceEE
Confidence 35677788999999998 5999999994 6754444
No 40
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=29.22 E-value=38 Score=29.81 Aligned_cols=42 Identities=17% Similarity=0.122 Sum_probs=33.4
Q ss_pred ccEEEecCcccEEEeeecCCCCCCCCCCcccccccccc-eEEEEEeccccc
Q 023180 232 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG-EKWVATKWIRDQ 281 (286)
Q Consensus 232 ~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~Wi~~~ 281 (286)
..++.+=++|++++|.| .+++|+..+-..+ .++.-+.|+.+.
T Consensus 240 ~~~~~~w~~GDlviwDN--------r~vlH~r~~~~~~~~R~l~R~~i~gd 282 (293)
T 3eat_X 240 AHYAHRWRSDDLVIADN--------LTLLHGREAFAHRAPRHLRRVHIHAE 282 (293)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCBSSCCCEEEEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEeC--------CceEEcccCCCCCCceEEEEEEEcCC
Confidence 35778889999999998 6999999886543 678888887643
No 41
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=28.89 E-value=46 Score=28.76 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=24.1
Q ss_pred cccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceeccc
Q 023180 176 YDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPF 216 (286)
Q Consensus 176 y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~ 216 (286)
-.+|.|..... ..-.+++|.=+.-...||+|.|-+
T Consensus 96 ~~wHtD~sy~~------~pp~~~~L~c~~~p~~GG~T~~~d 130 (283)
T 1otj_A 96 DNWHTDVTFIE------TPPAGAILAAKELPSTGGDTLWTS 130 (283)
T ss_dssp CSCBCTTTTSS------SCEEEEEEEEEECCSSCCCEEEEE
T ss_pred CCcEeeccCcc------CCCceEEEEEEecCCCCCcceeee
Confidence 35999987542 233556666666778899999964
No 42
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=28.51 E-value=40 Score=29.42 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=24.9
Q ss_pred CccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecc
Q 023180 174 QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFP 215 (286)
Q Consensus 174 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp 215 (286)
+...||.|...... .-.+++|.-+.-...||+|.|-
T Consensus 92 ~~~~wH~D~sy~~~------pp~~~~l~~~~~p~~GG~T~~~ 127 (277)
T 3pvj_A 92 DNAVWHTDVTFLPT------PALGAVLSAKQLPAYGGDTLWA 127 (277)
T ss_dssp GGSSCBCTTTTSSS------CCCEEEEEEEECCSSCCCEEEE
T ss_pred cCCCceeeCCCcCC------CCceEEEEeeccCCCCCCcEee
Confidence 45779999875421 2246666666667889999985
No 43
>1rie_A Rieske iron-sulfur protein; oxidoreductase, cytochrome BC1 complex, histidine ligands, rieske iron-sulfur cluster, electron transport; 1.50A {Bos taurus} SCOP: b.33.1.1
Probab=28.26 E-value=58 Score=24.98 Aligned_cols=21 Identities=14% Similarity=0.300 Sum_probs=17.4
Q ss_pred cccEEEeeecCCCCCCCCCCcccccccccc
Q 023180 240 RGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 269 (286)
Q Consensus 240 ~G~allF~n~~~~g~~D~~~lH~g~PV~~G 269 (286)
.|....|.| .+.|.|||+..|
T Consensus 62 ~g~~~a~~~---------~C~H~g~~l~~g 82 (129)
T 1rie_A 62 KPEWVILIG---------VCTHLGCVPIAN 82 (129)
T ss_dssp STTEEEEEC---------CCTTTSCCCEET
T ss_pred CCeEEEEEC---------ccCCCCeecccc
Confidence 678888876 799999998765
No 44
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=27.07 E-value=45 Score=29.18 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=33.7
Q ss_pred ccEEEecCcccEEEeeecCCCCCCCCCCccccccccc-ceEEEEEecccc
Q 023180 232 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK-GEKWVATKWIRD 280 (286)
Q Consensus 232 ~~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~~Wi~~ 280 (286)
.-+.++=++|++++|.| .+++|+..+-.. +.++.-+.|+..
T Consensus 243 ~~~~~~w~~GDvvi~DN--------r~~lH~r~~f~~~~~R~l~R~~i~g 284 (301)
T 1oih_A 243 NTVRWRWEAGDVAIWDN--------RATQHYAVDDYGTQPRIVRRVTLAG 284 (301)
T ss_dssp GEEEECCCTTCEEEEET--------TSEEEEECCCCTTSCCEEEEEEECC
T ss_pred ceEEEEEcCCCEEEEEc--------cceeecccCCCCCCceEEEEEEEeC
Confidence 35788889999999998 599999998764 378888888864
No 45
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=26.35 E-value=78 Score=23.25 Aligned_cols=49 Identities=16% Similarity=0.169 Sum_probs=31.6
Q ss_pred EEEEeccCCCCCcceecccCCCcccCCCCCccccccEE-EecCcccEEEeeecCCCCCCCCCCcccccccccc
Q 023180 198 SFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLK-VKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 269 (286)
Q Consensus 198 T~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~~l~-V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G 269 (286)
..+.-++|..+|+...|.... ..+. ++. .|....|.| ...|.|+|+..|
T Consensus 7 ~~v~~~~~l~~g~~~~~~~~g-------------~~i~v~r~-~g~~~A~~n---------~CpH~g~~L~~g 56 (112)
T 1fqt_A 7 TRVCDRRDVPEGEALKVESGG-------------TSVAIFNV-DGELFATQD---------RCTHGDWSLSDG 56 (112)
T ss_dssp EEEEEGGGSCTTCEEEEEETT-------------EEEEEEEE-TTEEEEEES---------BCTTSSCBSSTT
T ss_pred EEeEeHHHCCCCCeEEEEECC-------------EEEEEEEE-CCEEEEEEC---------CCCCCCcCCCCC
Confidence 344567777777666664321 1232 333 788888876 799999998776
No 46
>3a4c_A DNA replication factor CDT1; alpha-beta structure, cell cycle, DNA- binding, nucleus, phosphoprotein, proto-oncogene, UBL conjugation; HET: DNA; 1.89A {Mus musculus} PDB: 2rqq_A*
Probab=25.81 E-value=1.6e+02 Score=22.16 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=39.1
Q ss_pred ecCCCCHHHHHHHHHHHhcCCCcceeeecCCceeeeecceeeccceeecCCCChHHHHHHHHHHHHH
Q 023180 87 FPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTGILELIEHKIAR 153 (286)
Q Consensus 87 ~~nfLs~eEC~~li~~a~~~l~~s~v~~~~G~~~~~~~~~RtS~~~~l~~~ed~~~v~~~I~~Ri~~ 153 (286)
|...+|+.|.+..+++... +.|..+.. ..+|+..-.-++...|...++++++.....
T Consensus 47 yr~~ls~~EmE~hl~lL~e-llPdWls~---------~~vR~~~ylKl~k~~dl~~i~~rLe~~a~~ 103 (106)
T 3a4c_A 47 CQTALSPGEMEKHLVLLAE-LLPDWLSL---------HRIRTDTYVKLDKAVDLAGLTARLAHHVHA 103 (106)
T ss_dssp SCCSCCHHHHHHHHHHHHH-HCTTTEEE---------EEETTEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHH-hCcchhee---------eeeeccceeeeehhhhHHHHHHHHHHHHHh
Confidence 4788999999999888865 44555532 345655555666666766788887766544
No 47
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=25.75 E-value=39 Score=20.38 Aligned_cols=15 Identities=20% Similarity=0.292 Sum_probs=9.1
Q ss_pred chhHHHHHHHHHHHh
Q 023180 13 GLPTALLLCSFFFLA 27 (286)
Q Consensus 13 ~~~~~~~~~~~~~~~ 27 (286)
.+|.++++.+|||+.
T Consensus 6 ~l~~v~~~~ifYFl~ 20 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMI 20 (37)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 356666666666653
No 48
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=25.19 E-value=52 Score=28.77 Aligned_cols=38 Identities=21% Similarity=0.171 Sum_probs=25.5
Q ss_pred CCccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceeccc
Q 023180 173 GQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPF 216 (286)
Q Consensus 173 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp~ 216 (286)
+....+|.|..... ..-.+++|.=+.-...||+|.|-+
T Consensus 102 ~~~~~wHtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 102 QRANSWHTDVTFVE------AYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp -CCCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CcCcCCEecccCcC------CCCceEEEEEeecCCCCCcccccc
Confidence 34567999987543 122456666666678899999964
No 49
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=24.96 E-value=44 Score=28.84 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=20.3
Q ss_pred CEEEecCCCCHHHHHHHHHHHhc
Q 023180 83 RALYFPNFASAEQCQSIIATAKK 105 (286)
Q Consensus 83 ~I~~~~nfLs~eEC~~li~~a~~ 105 (286)
..+++++||+++||+.+.+.++.
T Consensus 16 Gyvvl~~~l~~e~v~~l~~~~~~ 38 (291)
T 2opw_A 16 GFLVLEGFLSAEECVAMQQRIGE 38 (291)
T ss_dssp SEEEETTSSCHHHHHHHHHHHHH
T ss_pred CEEEecCCCCHHHHHHHHHHHHH
Confidence 46899999999999999988865
No 50
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=24.02 E-value=87 Score=23.21 Aligned_cols=49 Identities=18% Similarity=0.059 Sum_probs=30.3
Q ss_pred EEEeccCCCCCcceecccCCCcccCCCCCccccc-cEEEecCcccEEEeeecCCCCCCCCCCcccccccccc
Q 023180 199 FLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCI-GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 269 (286)
Q Consensus 199 ~liYLndv~eGGeT~Fp~~~~~~~~~~~~~~~~~-~l~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G 269 (286)
.+.-++|..+|+...|.... . .+.|--..|....|.| ...|.|+|+..|
T Consensus 7 ~v~~~~el~~g~~~~~~~~g-------------~~~v~v~r~~g~~~A~~n---------~CpH~g~~L~~g 56 (115)
T 2de6_D 7 KVCAASDMQPGTIRRVNRVG-------------AAPLAVYRVGDQFYATED---------TCTHGIASLSEG 56 (115)
T ss_dssp EEEEGGGCCTTEEEEEEETT-------------EEEEEEEEETTEEEEEES---------BCTTSSCBGGGS
T ss_pred EeEEHHHCCCCCeEEEEECC-------------ccEEEEEEECCEEEEEeC---------CCCCCCCCCcCC
Confidence 34567777777666654321 1 2222222677777766 799999999876
No 51
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=23.53 E-value=52 Score=29.17 Aligned_cols=36 Identities=25% Similarity=0.204 Sum_probs=24.2
Q ss_pred CccccCccCCCCCCCCCCCCceEEEEEEeccCCCCCcceecc
Q 023180 174 QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFP 215 (286)
Q Consensus 174 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLndv~eGGeT~Fp 215 (286)
....||.|...... .-.+++|.-+.-...||+|.|-
T Consensus 98 ~~~~wH~D~s~~~~------pp~~~~l~~~~~p~~GG~T~fa 133 (301)
T 3r1j_A 98 KATRWHTDVTFAAN------YPAASILRAVTLPSYGGSTLWA 133 (301)
T ss_dssp -CCSCBCTTTTSSS------CCSEEEEEEEECCSSCCCEEEE
T ss_pred CCCCCccccCCccC------CCceeEEEEeecCCCCCCCeeE
Confidence 45679999876431 2235666666667789999985
No 52
>1rfs_A Rieske protein; iron-sulfur protein, electron transport; 1.83A {Spinacia oleracea} SCOP: b.33.1.1 PDB: 1q90_C*
Probab=21.20 E-value=42 Score=26.26 Aligned_cols=12 Identities=25% Similarity=0.235 Sum_probs=9.3
Q ss_pred CCcccccccccc
Q 023180 258 TSLHGSCPVIKG 269 (286)
Q Consensus 258 ~~lH~g~PV~~G 269 (286)
.+.|.+||+..|
T Consensus 66 ~CpH~g~~L~~g 77 (139)
T 1rfs_A 66 VCTHLGCVVPFN 77 (139)
T ss_dssp BCTTTCCBCCEE
T ss_pred cCCCCCCCCccC
Confidence 788888888654
Done!