BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023183
(286 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359493332|ref|XP_002264725.2| PREDICTED: uncharacterized protein LOC100244294 [Vitis vinifera]
Length = 299
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/273 (64%), Positives = 223/273 (81%), Gaps = 5/273 (1%)
Query: 15 HHQPYPFAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLAL 74
Q Y F + T R +A +A S +PLLPF+IN+VL+PSESK LH YEARYLAL
Sbjct: 31 QFQQYSFRNR-QTKRCGFIAA---HADSSGLPLLPFDINQVLIPSESKTLHFYEARYLAL 86
Query: 75 LEEALVRKK-LFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGR 133
LEE+L RKK LFV+FVLDP+ + + + +SFAAR GCLV+IENVERLD+GALVSIRG+GR
Sbjct: 87 LEESLFRKKKLFVHFVLDPVIVGDSSAGSSFAARYGCLVIIENVERLDVGALVSIRGIGR 146
Query: 134 VKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVM 193
VKI++F QADP+LKG VIPMQD S++SSKV +KEA+YSLNSLEIKLKAPKE ++
Sbjct: 147 VKIMEFVQADPYLKGIVIPMQDNIFECESEISSKVSELKEALYSLNSLEIKLKAPKEELL 206
Query: 194 QTYVLNSLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDL 253
QT + SL WAEK+PS+DCDEAF+PSLAER+SFAA QPV+GSTQSEL++LQ+EKL+AMD+
Sbjct: 207 QTCIAKSLMWAEKEPSVDCDEAFVPSLAERISFAALQPVTGSTQSELLELQREKLRAMDV 266
Query: 254 RDTKQRLNNSLEFVEGSISMLAAKLAIQALEMQ 286
R+T +R+++SL+ V SISM+ AKLAIQ+LE+Q
Sbjct: 267 RETLERIDDSLQLVRKSISMVVAKLAIQSLEVQ 299
>gi|12322943|gb|AAG51459.1|AC069160_5 unknown protein [Arabidopsis thaliana]
Length = 293
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/287 (59%), Positives = 226/287 (78%), Gaps = 6/287 (2%)
Query: 5 SCVSCPFFVT---HHQPYPFAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSES 61
S +S FF T H P + R R + K+ A SL +PLLPF+++EVLVP+ES
Sbjct: 8 SNLSSSFFPTQNIHRIRIPTTSIPGSFNIRARRS-KIVAKSLDLPLLPFSMSEVLVPTES 66
Query: 62 KILHLYEARYLALLEEALVRKK-LFVYFVLDPISISEYATEASFAARCGCLVLIENVERL 120
K LHLYEARYLALLEE++ RKK +FV+F+LDPISISE ATEASFAAR GCLVLIENVERL
Sbjct: 67 KTLHLYEARYLALLEESMKRKKNMFVHFILDPISISETATEASFAARYGCLVLIENVERL 126
Query: 121 DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTS-ASPSDVSSKVLSVKEAVYSLN 179
D+GALVSIRG GRVKI +F ADP+L GEV P+QD + S ++++SK+ +KE++ +LN
Sbjct: 127 DVGALVSIRGAGRVKISRFLGADPYLSGEVRPIQDRMNYESSNELTSKISQLKESIKNLN 186
Query: 180 SLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQSE 239
SLEIKLKAP ++ +QT ++NSL WAE +P +D DE+F+PSL ER+SF+AFQP+SGST+SE
Sbjct: 187 SLEIKLKAPADSPLQTRLINSLNWAEDEPPVDFDESFVPSLQERLSFSAFQPISGSTKSE 246
Query: 240 LVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQALEMQ 286
L +LQQEK+KAMD++DT +RL S+ ++ +IS +AAKLAIQ+L+++
Sbjct: 247 LSRLQQEKIKAMDMKDTIERLELSMGLIKENISSIAAKLAIQSLDIR 293
>gi|145336413|ref|NP_174767.2| ATP-dependent protease La (LON) domain-containing protein
[Arabidopsis thaliana]
gi|51968886|dbj|BAD43135.1| unknown protein [Arabidopsis thaliana]
gi|332193662|gb|AEE31783.1| ATP-dependent protease La (LON) domain-containing protein
[Arabidopsis thaliana]
Length = 316
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 171/287 (59%), Positives = 226/287 (78%), Gaps = 6/287 (2%)
Query: 5 SCVSCPFFVT---HHQPYPFAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSES 61
S +S FF T H P + R R + K+ A SL +PLLPF+++EVLVP+ES
Sbjct: 31 SNLSSSFFPTQNIHRIRIPTTSIPGSFNIRARRS-KIVAKSLDLPLLPFSMSEVLVPTES 89
Query: 62 KILHLYEARYLALLEEALVRKK-LFVYFVLDPISISEYATEASFAARCGCLVLIENVERL 120
K LHLYEARYLALLEE++ RKK +FV+F+LDPISISE ATEASFAAR GCLVLIENVERL
Sbjct: 90 KTLHLYEARYLALLEESMKRKKNMFVHFILDPISISETATEASFAARYGCLVLIENVERL 149
Query: 121 DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTS-ASPSDVSSKVLSVKEAVYSLN 179
D+GALVSIRG GRVKI +F ADP+L GEV P+QD + S ++++SK+ +KE++ +LN
Sbjct: 150 DVGALVSIRGAGRVKISRFLGADPYLSGEVRPIQDRMNYESSNELTSKISQLKESIKNLN 209
Query: 180 SLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQSE 239
SLEIKLKAP ++ +QT ++NSL WAE +P +D DE+F+PSL ER+SF+AFQP+SGST+SE
Sbjct: 210 SLEIKLKAPADSPLQTRLINSLNWAEDEPPVDFDESFVPSLQERLSFSAFQPISGSTKSE 269
Query: 240 LVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQALEMQ 286
L +LQQEK+KAMD++DT +RL S+ ++ +IS +AAKLAIQ+L+++
Sbjct: 270 LSRLQQEKIKAMDMKDTIERLELSMGLIKENISSIAAKLAIQSLDIR 316
>gi|297846584|ref|XP_002891173.1| hypothetical protein ARALYDRAFT_891170 [Arabidopsis lyrata subsp.
lyrata]
gi|297337015|gb|EFH67432.1| hypothetical protein ARALYDRAFT_891170 [Arabidopsis lyrata subsp.
lyrata]
Length = 293
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/287 (58%), Positives = 224/287 (78%), Gaps = 6/287 (2%)
Query: 5 SCVSCPFFVT---HHQPYPFAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSES 61
S +S FF T H P R R + K+ A SL +PLLPF+++EVLVP+ES
Sbjct: 8 SNLSSTFFPTKNLHRIRIPATSIPGGFNIRARRS-KIVAKSLNLPLLPFSMSEVLVPTES 66
Query: 62 KILHLYEARYLALLEEALVRKK-LFVYFVLDPISISEYATEASFAARCGCLVLIENVERL 120
K LHLYEARYLALLEE++ RKK +FV+F+LDPISISE ATEASFAAR GCLV IENVERL
Sbjct: 67 KTLHLYEARYLALLEESMKRKKNMFVHFILDPISISETATEASFAARYGCLVFIENVERL 126
Query: 121 DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTS-ASPSDVSSKVLSVKEAVYSLN 179
D+GALVSIRG GRVKI +F ADP+L GEV P+QD + S ++++SK+ +KE++ +LN
Sbjct: 127 DVGALVSIRGAGRVKISRFLGADPYLSGEVRPIQDRVNYESSNELTSKISQLKESIKNLN 186
Query: 180 SLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQSE 239
SLEIKLKAP ++ +QT ++NSL WAE +P+++ DE+F+PSL ER+SF+A QP+SGST+SE
Sbjct: 187 SLEIKLKAPADSPLQTRLINSLNWAEDEPAVEFDESFLPSLQERLSFSALQPISGSTKSE 246
Query: 240 LVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQALEMQ 286
L +LQQEKLKAMD++DT +RL S+ ++ +IS +AAKLAIQ+L+++
Sbjct: 247 LSRLQQEKLKAMDMKDTIERLELSMGLIKENISSIAAKLAIQSLDIR 293
>gi|334183038|ref|NP_001185139.1| ATP-dependent protease La (LON) domain-containing protein
[Arabidopsis thaliana]
gi|332193663|gb|AEE31784.1| ATP-dependent protease La (LON) domain-containing protein
[Arabidopsis thaliana]
Length = 311
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/287 (57%), Positives = 221/287 (77%), Gaps = 11/287 (3%)
Query: 5 SCVSCPFFVT---HHQPYPFAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSES 61
S +S FF T H P + R R + K+ A SL +PLLPF+++EVLVP+ES
Sbjct: 31 SNLSSSFFPTQNIHRIRIPTTSIPGSFNIRARRS-KIVAKSLDLPLLPFSMSEVLVPTES 89
Query: 62 KILHLYEARYLALLEEALVRKK-LFVYFVLDPISISEYATEASFAARCGCLVLIENVERL 120
K LHLYEARYLALLEE++ RKK +FV+F+LDPISISE ATEASFAAR GCLV ERL
Sbjct: 90 KTLHLYEARYLALLEESMKRKKNMFVHFILDPISISETATEASFAARYGCLV-----ERL 144
Query: 121 DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTS-ASPSDVSSKVLSVKEAVYSLN 179
D+GALVSIRG GRVKI +F ADP+L GEV P+QD + S ++++SK+ +KE++ +LN
Sbjct: 145 DVGALVSIRGAGRVKISRFLGADPYLSGEVRPIQDRMNYESSNELTSKISQLKESIKNLN 204
Query: 180 SLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQSE 239
SLEIKLKAP ++ +QT ++NSL WAE +P +D DE+F+PSL ER+SF+AFQP+SGST+SE
Sbjct: 205 SLEIKLKAPADSPLQTRLINSLNWAEDEPPVDFDESFVPSLQERLSFSAFQPISGSTKSE 264
Query: 240 LVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQALEMQ 286
L +LQQEK+KAMD++DT +RL S+ ++ +IS +AAKLAIQ+L+++
Sbjct: 265 LSRLQQEKIKAMDMKDTIERLELSMGLIKENISSIAAKLAIQSLDIR 311
>gi|449447625|ref|XP_004141568.1| PREDICTED: uncharacterized protein LOC101210271 [Cucumis sativus]
gi|449526802|ref|XP_004170402.1| PREDICTED: uncharacterized LOC101210271 [Cucumis sativus]
Length = 332
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/258 (61%), Positives = 207/258 (80%), Gaps = 2/258 (0%)
Query: 30 ARLRSALKVNAT-SLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRK-KLFVY 87
A R L V AT SL +PLLPF +N+VLVPSESK LHLYEARYLALL+E+L RK K+FV+
Sbjct: 75 AERRWNLSVYATTSLDLPLLPFGVNDVLVPSESKTLHLYEARYLALLDESLFRKNKVFVH 134
Query: 88 FVLDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLK 147
FVLDP+++S+ + E SFAAR CLV IENVERL +GALV+IRG+GRVKI++ Q DP+L+
Sbjct: 135 FVLDPVAVSDSSREISFAARHACLVFIENVERLQVGALVTIRGIGRVKIIELLQVDPYLR 194
Query: 148 GEVIPMQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQ 207
G ++ ++D +SSKV+ VK +++LNSLEIKLKAPK+ ++QT +LNSL WAEK
Sbjct: 195 GTILSVRDNIVQDECLLSSKVMDVKNVLHNLNSLEIKLKAPKDELLQTQILNSLNWAEKG 254
Query: 208 PSLDCDEAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFV 267
+D D+ F+PSLAERVSFAAFQPVSGST+SEL LQ +KLKAMD+++T +RLN SL+
Sbjct: 255 IYVDIDQNFVPSLAERVSFAAFQPVSGSTKSELQSLQLKKLKAMDMKNTHERLNKSLKLT 314
Query: 268 EGSISMLAAKLAIQALEM 285
+ +IS++AAKLAIQ++E+
Sbjct: 315 KENISIVAAKLAIQSIEI 332
>gi|255561548|ref|XP_002521784.1| ATP-dependent peptidase, putative [Ricinus communis]
gi|223538997|gb|EEF40594.1| ATP-dependent peptidase, putative [Ricinus communis]
Length = 313
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 152/211 (72%), Positives = 175/211 (82%), Gaps = 3/211 (1%)
Query: 25 LSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRK-K 83
LS + R RS NA L PLLPFN +EVLVPSESK LHLYEARYLALLEE+L+RK K
Sbjct: 87 LSWSTIRRRSCFSPNALEL--PLLPFNTSEVLVPSESKTLHLYEARYLALLEESLLRKQK 144
Query: 84 LFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQAD 143
LFV+FVLDPI IS TEASFAAR GCLV+IENVERLD+GALVSIRG+GRVKI KF Q+D
Sbjct: 145 LFVHFVLDPILISSSGTEASFAARYGCLVIIENVERLDVGALVSIRGIGRVKIAKFLQSD 204
Query: 144 PFLKGEVIPMQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW 203
P+L GEVIP+QD S S ++SKV +VKEA+ +LNSLEIKLKAPKEA++QT + NSL W
Sbjct: 205 PYLIGEVIPVQDWVLESASKLTSKVAAVKEALCNLNSLEIKLKAPKEALLQTRIANSLSW 264
Query: 204 AEKQPSLDCDEAFIPSLAERVSFAAFQPVSG 234
AEK+PSL+CD+AFIPSLAERVSF A QP+SG
Sbjct: 265 AEKEPSLECDKAFIPSLAERVSFTALQPISG 295
>gi|296089527|emb|CBI39346.3| unnamed protein product [Vitis vinifera]
Length = 321
Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 176/207 (85%), Gaps = 1/207 (0%)
Query: 36 LKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKK-LFVYFVLDPIS 94
+ +A S +PLLPF+IN+VL+PSESK LH YEARYLALLEE+L RKK LFV+FVLDP+
Sbjct: 48 IAAHADSSGLPLLPFDINQVLIPSESKTLHFYEARYLALLEESLFRKKKLFVHFVLDPVI 107
Query: 95 ISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQ 154
+ + + +SFAAR GCLV+IENVERLD+GALVSIRG+GRVKI++F QADP+LKG VIPMQ
Sbjct: 108 VGDSSAGSSFAARYGCLVIIENVERLDVGALVSIRGIGRVKIMEFVQADPYLKGIVIPMQ 167
Query: 155 DTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDE 214
D S++SSKV +KEA+YSLNSLEIKLKAPKE ++QT + SL WAEK+PS+DCDE
Sbjct: 168 DNIFECESEISSKVSELKEALYSLNSLEIKLKAPKEELLQTCIAKSLMWAEKEPSVDCDE 227
Query: 215 AFIPSLAERVSFAAFQPVSGSTQSELV 241
AF+PSLAER+SFAA QPV+GSTQSEL+
Sbjct: 228 AFVPSLAERISFAALQPVTGSTQSELL 254
>gi|30693180|ref|NP_849748.1| ATP-dependent protease La (LON) domain-containing protein
[Arabidopsis thaliana]
gi|42571743|ref|NP_973962.1| ATP-dependent protease La (LON) domain-containing protein
[Arabidopsis thaliana]
gi|45752750|gb|AAS76273.1| At1g35340 [Arabidopsis thaliana]
gi|332193660|gb|AEE31781.1| ATP-dependent protease La (LON) domain-containing protein
[Arabidopsis thaliana]
gi|332193661|gb|AEE31782.1| ATP-dependent protease La (LON) domain-containing protein
[Arabidopsis thaliana]
Length = 210
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/207 (62%), Positives = 174/207 (84%), Gaps = 1/207 (0%)
Query: 81 RKKLFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFF 140
+K +FV+F+LDPISISE ATEASFAAR GCLVLIENVERLD+GALVSIRG GRVKI +F
Sbjct: 4 KKNMFVHFILDPISISETATEASFAARYGCLVLIENVERLDVGALVSIRGAGRVKISRFL 63
Query: 141 QADPFLKGEVIPMQDTTS-ASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLN 199
ADP+L GEV P+QD + S ++++SK+ +KE++ +LNSLEIKLKAP ++ +QT ++N
Sbjct: 64 GADPYLSGEVRPIQDRMNYESSNELTSKISQLKESIKNLNSLEIKLKAPADSPLQTRLIN 123
Query: 200 SLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQR 259
SL WAE +P +D DE+F+PSL ER+SF+AFQP+SGST+SEL +LQQEK+KAMD++DT +R
Sbjct: 124 SLNWAEDEPPVDFDESFVPSLQERLSFSAFQPISGSTKSELSRLQQEKIKAMDMKDTIER 183
Query: 260 LNNSLEFVEGSISMLAAKLAIQALEMQ 286
L S+ ++ +IS +AAKLAIQ+L+++
Sbjct: 184 LELSMGLIKENISSIAAKLAIQSLDIR 210
>gi|357152561|ref|XP_003576160.1| PREDICTED: uncharacterized protein LOC100824626 [Brachypodium
distachyon]
Length = 438
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 178/242 (73%), Gaps = 4/242 (1%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKK-LFVYFVLDPISISEYATE 101
L PLLPF EVL+PSE K LHLYEARYLALLEEAL R+K V+FVLDP+ S +++
Sbjct: 200 LDFPLLPFPPAEVLIPSECKTLHLYEARYLALLEEALYRRKNSLVHFVLDPVLSS--SSK 257
Query: 102 ASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASP 161
SFA R GCLV IE+V++LD+GALVSIRG+ RV I Q +P+L+G++ PM D S
Sbjct: 258 DSFAVRYGCLVQIESVQKLDLGALVSIRGLCRVNIKNLLQMEPYLRGDISPMMDKFSGG- 316
Query: 162 SDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLA 221
+++ ++ ++E + +L+SL++KLK P++ +QT + +SL W+EK+ D D FIP L
Sbjct: 317 TELGMRISKLREGMCNLHSLQMKLKVPEDEPLQTNIKSSLLWSEKEIFEDYDNEFIPGLP 376
Query: 222 ERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
ER+SFAA+Q VSG + +EL+ LQ+ K+KAMDL DT +R+N+ +E+VE +I M+AA+LAIQ
Sbjct: 377 ERLSFAAYQSVSGMSDAELLTLQKYKIKAMDLTDTLERINSGIEYVEHNIGMIAARLAIQ 436
Query: 282 AL 283
+
Sbjct: 437 NI 438
>gi|242068171|ref|XP_002449362.1| hypothetical protein SORBIDRAFT_05g008630 [Sorghum bicolor]
gi|241935205|gb|EES08350.1| hypothetical protein SORBIDRAFT_05g008630 [Sorghum bicolor]
Length = 292
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 169/235 (71%), Gaps = 4/235 (1%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALV-RKKLFVYFVLDPISISEYATEASFAARC 108
F EVL+PSESK LHLYEARY+ALLEEAL RK FV+FVLDP+ S T+ASFA R
Sbjct: 61 FQPAEVLIPSESKTLHLYEARYIALLEEALYKRKNTFVHFVLDPVVDS--TTKASFAVRY 118
Query: 109 GCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKV 168
GCLV IE++++L+IGAL+SIRGV RV I +P+ +G V PM D + ++ +++
Sbjct: 119 GCLVHIESIQKLEIGALISIRGVCRVNISNLLDMEPYFRGTVSPMMDEPYEA-IELGTRI 177
Query: 169 LSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERVSFAA 228
+KE++ +L+SL++KLK P++ +QT + SL W+EK+ + +E+FIP ER+SFAA
Sbjct: 178 SKLKESMCNLHSLQMKLKVPEDEPLQTNIRASLLWSEKEIFEEYNESFIPGHPERLSFAA 237
Query: 229 FQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQAL 283
+Q VSG + EL+ LQ K++AMD DT +RLNN ++FVE +I M+AA+LAIQ +
Sbjct: 238 YQTVSGMSDEELLTLQNYKIQAMDSIDTLERLNNGIKFVEHNIGMIAARLAIQNI 292
>gi|218194352|gb|EEC76779.1| hypothetical protein OsI_14874 [Oryza sativa Indica Group]
Length = 269
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/260 (48%), Positives = 182/260 (70%), Gaps = 18/260 (6%)
Query: 26 STTRARLRSALKVNA---TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRK 82
+T R R+ ++ ++ SL +PLLPF EVL+PSE K LHLYEARYLALLEEAL RK
Sbjct: 22 ATRRRHPRAVVRCSSPSPASLDLPLLPFQPAEVLIPSECKTLHLYEARYLALLEEALYRK 81
Query: 83 K-LFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQ 141
FV+FVLDP+ + +ASFA VERLDIGALVSIRGV RV I+ Q
Sbjct: 82 NNSFVHFVLDPVVSG--SPKASFA-----------VERLDIGALVSIRGVCRVNIINLLQ 128
Query: 142 ADPFLKGEVIPMQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSL 201
+P+L+G+V P+ D +S S ++ ++ ++E++ +L+SL++KLK P + +QT + SL
Sbjct: 129 MEPYLRGDVSPIMDISSES-IELGLRISKLRESMCNLHSLQMKLKVPDDEPLQTNIKASL 187
Query: 202 QWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLN 261
W+EK+ + +E FIP+L ER+SFAA+Q VSG +++EL+ LQ+ K++AMD +T +RLN
Sbjct: 188 LWSEKEIFEEYNEGFIPALPERLSFAAYQTVSGMSEAELLSLQKYKIQAMDSTNTLERLN 247
Query: 262 NSLEFVEGSISMLAAKLAIQ 281
+ +E+VE +I M+AA+LAIQ
Sbjct: 248 SGIEYVEHNIGMIAARLAIQ 267
>gi|222636057|gb|EEE66189.1| hypothetical protein OsJ_22305 [Oryza sativa Japonica Group]
Length = 282
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/230 (49%), Positives = 164/230 (71%), Gaps = 15/230 (6%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVR-KKLFVYFVLDPISISEYATEASFAARCGCLVL 113
VL+PSE K LHLYEARYLALLEEAL R FV+ VLDP+ + +ASFA
Sbjct: 67 VLIPSECKTLHLYEARYLALLEEALYRTNNSFVHLVLDPVVSG--SPKASFA-------- 116
Query: 114 IENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKVLSVKE 173
VERLDIGALVSIRGV RV I+ Q +P+L+G+V P+ D +S S ++ ++ ++E
Sbjct: 117 ---VERLDIGALVSIRGVCRVNIINLLQMEPYLRGDVSPIMDISSES-IELGLRISKLRE 172
Query: 174 AVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVS 233
++ +L+SL++KLK P++ +QT + SL W+EK+ + +E FIP+L ER+SFAA+Q VS
Sbjct: 173 SMCNLHSLQMKLKVPEDEPLQTNIKASLLWSEKEIFEEYNEGFIPALPERLSFAAYQTVS 232
Query: 234 GSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQAL 283
G +++EL+ LQ+ K++AMD +T +RLN+ +E+VE +I M+AA+LAIQ +
Sbjct: 233 GMSEAELLSLQKYKIQAMDSTNTLERLNSGIEYVEHNIGMIAARLAIQNI 282
>gi|77549287|gb|ABA92084.1| ATP-dependent protease La, putative [Oryza sativa Japonica Group]
Length = 284
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/251 (46%), Positives = 172/251 (68%), Gaps = 18/251 (7%)
Query: 26 STTRARLRSALKVNA---TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVR- 81
+T R R+ ++ ++ SL +PLLPF EVL+PSE K LHLYEARYLALLEEAL R
Sbjct: 22 ATRRRHPRAVVRCSSPSPASLDLPLLPFQPAEVLIPSECKTLHLYEARYLALLEEALYRT 81
Query: 82 KKLFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQ 141
FV+ VLDP+ + +ASFA VERLDIGALVSIRGV RV I+ Q
Sbjct: 82 NNSFVHLVLDPVVSG--SPKASFA-----------VERLDIGALVSIRGVCRVNIINLLQ 128
Query: 142 ADPFLKGEVIPMQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSL 201
+P+L+G+V P+ D +S S ++ ++ ++E++ +L+SL++KLK P++ +QT + SL
Sbjct: 129 MEPYLRGDVSPIMDISSES-IELGLRISKLRESMCNLHSLQMKLKVPEDEPLQTNIKASL 187
Query: 202 QWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLN 261
W+EK+ + +E FIP+L ER+SFAA+Q VSG +++EL+ LQ+ K++AMD +T +RLN
Sbjct: 188 LWSEKEIFEEYNEGFIPALPERLSFAAYQTVSGMSEAELLSLQKYKIQAMDSTNTLERLN 247
Query: 262 NSLEFVEGSIS 272
+ +E+VE +I
Sbjct: 248 SGIEYVEHNIG 258
>gi|116793893|gb|ABK26920.1| unknown [Picea sitchensis]
Length = 347
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 146/219 (66%), Gaps = 1/219 (0%)
Query: 20 PFAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEAL 79
P + +L+ T LK + ++ +P LPF EV VPS + LHLYEAR+LALLEEA+
Sbjct: 69 PTSWKLNVTSNSGGGLLKDESCAIELPCLPFTSTEVFVPSATTTLHLYEARFLALLEEAM 128
Query: 80 VR-KKLFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVK 138
+ FV+FVLDP+S + ASFAA GCL LIENV+R++IGALV+IRG+GRV IV
Sbjct: 129 EKHNNFFVHFVLDPVSDFGSSAMASFAASYGCLTLIENVKRIEIGALVTIRGIGRVNIVT 188
Query: 139 FFQADPFLKGEVIPMQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVL 198
Q +P+L+G V P QD S V++ V +K AV L+ L++KLKA K+ +QT +
Sbjct: 189 LTQTEPYLRGIVEPKQDERPKDSSSVNAAVEELKLAVADLHRLQLKLKASKDEQLQTPLW 248
Query: 199 NSLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQ 237
NSL+WAEK LDC++ F+P L ER+SFAA QP++ S
Sbjct: 249 NSLRWAEKDGFLDCNKVFLPRLEERISFAALQPLTASNN 287
>gi|413920768|gb|AFW60700.1| hypothetical protein ZEAMMB73_634914, partial [Zea mays]
Length = 230
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 133/191 (69%), Gaps = 10/191 (5%)
Query: 33 RSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALV-RKKLFVYFVLD 91
R AL SL +PLLPF EVL+PSESK LHLYEARY+ALLEEAL R+K FV+FVLD
Sbjct: 45 RCALSPPTPSLDLPLLPFQPAEVLIPSESKTLHLYEARYIALLEEALYKREKSFVHFVLD 104
Query: 92 PISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVI 151
P+ S +T+ASFA R GCLV IE+V++L+IGAL+SIRGV RV I +P+ +G V
Sbjct: 105 PVVDS--STKASFAVRYGCLVHIESVQKLEIGALLSIRGVCRVNISNLLDMEPYFRGTVS 162
Query: 152 PMQDTTSASPSD---VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQP 208
PM D P D + +++ +KE++ +L+SL++KLK P++ +QT + SL W+EK+
Sbjct: 163 PMMD----GPYDAIELETRISKLKESMCNLHSLQMKLKVPEDEPLQTNIRASLLWSEKES 218
Query: 209 SLDCDEAFIPS 219
+ +E+FIP
Sbjct: 219 FEEYNESFIPG 229
>gi|168006199|ref|XP_001755797.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693116|gb|EDQ79470.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
Query: 84 LFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQAD 143
L + V++P+ E A ASF A GCL IE+V+RLDIGALVSIRG+GR+K+V Q +
Sbjct: 7 LLAHIVIEPVKGDE-AGVASFVATYGCLARIESVKRLDIGALVSIRGIGRIKMVSLTQME 65
Query: 144 PFLKGEVIPMQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW 203
PF+K V+P++D + K+ S+K+ + + L+IK+K KE + T + +LQW
Sbjct: 66 PFIKSTVMPVRDAYPEDRQPLLKKIESLKKTLAEVQQLQIKIKTAKEVPLLTPLEKALQW 125
Query: 204 AEKQPSLDCDEAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNS 263
AEK E+F+PS ER+SFAA QP++G++ EL KL QE+LK+M DT RLNN
Sbjct: 126 AEKGEPDSIVESFVPSREERLSFAALQPIAGASPGELHKLLQERLKSMTTVDTDVRLNNV 185
Query: 264 LEFVEGSISMLAAKLAIQALEM 285
+E+ E S + +AAK+A+Q+L++
Sbjct: 186 IEYAEQSRASVAAKVALQSLQL 207
>gi|147781955|emb|CAN72166.1| hypothetical protein VITISV_004168 [Vitis vinifera]
Length = 383
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 92/113 (81%)
Query: 75 LEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRV 134
LE +KKLFV+FVLDP+ + + + +SFAAR GCLV+IENVERLD+GALVSIRG+GRV
Sbjct: 196 LESLFRKKKLFVHFVLDPVIVGDSSAGSSFAARYGCLVIIENVERLDVGALVSIRGIGRV 255
Query: 135 KIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKA 187
KI++F QADP+LKG VIPMQD S++SSKV +KEA+YSLNSLEIKLK
Sbjct: 256 KIMEFVQADPYLKGIVIPMQDNIFECESEISSKVSELKEALYSLNSLEIKLKT 308
>gi|224145122|ref|XP_002325534.1| predicted protein [Populus trichocarpa]
gi|222862409|gb|EEE99915.1| predicted protein [Populus trichocarpa]
Length = 162
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 98/156 (62%), Gaps = 39/156 (25%)
Query: 162 SDVSSKVLSVKEAVYSLNSLEIKL-----------------------KAPKEAVMQTYVL 198
+++SS+V+ VKEA++SLNSLEI+L KA + +QT
Sbjct: 7 NEISSEVIPVKEALHSLNSLEIRLCSGWLHWKFVSRRARHLSTNIGKKASNDEFLQTCFA 66
Query: 199 NSLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVSGST---------------QSELVKL 243
NSL WAEK+PSL+CD+AFIP AER+SFAAFQP + + QSE +KL
Sbjct: 67 NSLTWAEKEPSLECDQAFIPYPAERISFAAFQPFTSNNQIDLHVAVFPTGSPAQSEKLKL 126
Query: 244 QQEKLKAMD-LRDTKQRLNNSLEFVEGSISMLAAKL 278
QQ+KL+AMD L+DT QRL+NSLE V +ISM+AAKL
Sbjct: 127 QQQKLRAMDHLKDTLQRLDNSLELVNENISMVAAKL 162
>gi|297728135|ref|NP_001176431.1| Os11g0219000 [Oryza sativa Japonica Group]
gi|255679912|dbj|BAH95159.1| Os11g0219000 [Oryza sativa Japonica Group]
Length = 124
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 6/95 (6%)
Query: 26 STTRARLRSALKVNA---TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVR- 81
+T R R+ ++ ++ SL +PLLPF EVL+PSE K LHLYEARYLALLEEAL R
Sbjct: 22 ATRRRHPRAVVRCSSPSPASLDLPLLPFQPAEVLIPSECKTLHLYEARYLALLEEALYRT 81
Query: 82 KKLFVYFVLDPISISEYATEASFAARCGCLVLIEN 116
FV+ VLDP+ + +ASFA R GCLV IE+
Sbjct: 82 NNSFVHLVLDPVVSG--SPKASFAVRHGCLVQIES 114
>gi|302841047|ref|XP_002952069.1| hypothetical protein VOLCADRAFT_105320 [Volvox carteri f.
nagariensis]
gi|300262655|gb|EFJ46860.1| hypothetical protein VOLCADRAFT_105320 [Volvox carteri f.
nagariensis]
Length = 385
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 19/158 (12%)
Query: 61 SKILHLYEARYLALLEEALVRK-KLFVYFVLDPI---SISE-------YATEASFAARCG 109
+K LHLYE +++L+EE + + KL VL+P ISE + +F+ CG
Sbjct: 2 TKTLHLYEPHFISLVEECMASEHKLMATAVLEPFLGDEISEADAGPGAFVGGYNFSLSCG 61
Query: 110 CLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD----VS 165
CLV + + + G LV IRG R+ I Q P+L+ +V P+ D + +D +
Sbjct: 62 CLVQVLSAKPYTGGYLVRIRGEARLGISGLPQTGPYLRAQVYPLPDQPTPLAADQQEELR 121
Query: 166 SKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW 203
SKV +++ + + +L K + + A +Q +++W
Sbjct: 122 SKVTQLQDILRDVQNLASKFRCDETAALQ----QAMRW 155
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 211 DCDEAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGS 270
D +E F P A R+S+A+ Q + ++ E + + + +L AMD RD +RL+ +LE + +
Sbjct: 312 DGEEDFDPEGAVRLSWASLQWLPHASTEERMYMVRTRLLAMDTRDVGRRLDLALEAMSRA 371
Query: 271 ISMLAAKLAIQA 282
+ LAAK AI+A
Sbjct: 372 RASLAAKCAIKA 383
>gi|145346037|ref|XP_001417503.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577730|gb|ABO95796.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 317
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 122/306 (39%), Gaps = 71/306 (23%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVR-KKLFVYFVLDPISISEYATEAS 103
VP L F E L+P LHLYEAR+LALLE+A+ R L P SE E
Sbjct: 10 VPALLFPRRETLLPGSRLTLHLYEARFLALLEDAMKRTGGLIAQLTFLPSESSEE--EGL 67
Query: 104 FAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKG---EVIPMQDTTSAS 160
L IE V R +GA V + G RVK+ +PF+ G V M D +
Sbjct: 68 TVNASATLARIETVTREAVGARVDVVGEARVKLEGIAGREPFITGVFTHVPQMGDAGTYV 127
Query: 161 PSDVSSKVLSVKE-------AVYSLNSLEIKL--KAPKEAVMQT----------YVLNSL 201
PSD +++ VKE AV + L +L AP + +++ N++
Sbjct: 128 PSD--AELAQVKEVTDYIEGAVRDVLLLSARLLGDAPSDTDVESAESDAKDEDADDENTV 185
Query: 202 Q----------WAEKQ-------------PSL------------DCDEAFIP-------- 218
W K+ PS+ D D +P
Sbjct: 186 NEFDDASFEGIWTHKEVGDLRSAMAWVDAPSVTVERIEAEVTMEDADWTTVPEGFAHSPL 245
Query: 219 SLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDL-RDTKQRLNNSLEFVEGSISMLAAK 277
+ AER+SFA Q ST ++L KL + AM RL + ++ + L AK
Sbjct: 246 TRAERLSFAVLQVAPASTPTDLQKLIACRAVAMSTDHGLMDRLRLGVSVLDDQLQTLRAK 305
Query: 278 LAIQAL 283
+A+++L
Sbjct: 306 VALKSL 311
>gi|255085582|ref|XP_002505222.1| predicted protein [Micromonas sp. RCC299]
gi|226520491|gb|ACO66480.1| predicted protein [Micromonas sp. RCC299]
Length = 386
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 45 VPLLP-------FNINEVLVPSESKILHLYEARYLALLEEALVR-KKLFVYFVLDPISIS 96
VPL+P F EVL+P +++LHLYEAR+LALL+E LF + P +
Sbjct: 78 VPLVPKKLPAMLFPAEEVLLPGSAQVLHLYEARFLALLDEVTNETGGLFAHVTFLPPAQG 137
Query: 97 EYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQAD--PFLKGEVIP-- 152
E + LV +E V+R ++GA V+I G R+ + + + +L G +P
Sbjct: 138 EADDGGLRVNQVATLVRVEEVQREEVGAKVTIIGESRMTLRELEEKSQRGYLVGTFVPIP 197
Query: 153 -MQDTTSAS 160
MQD SA+
Sbjct: 198 VMQDDGSAT 206
>gi|308802918|ref|XP_003078772.1| unnamed protein product [Ostreococcus tauri]
gi|116057225|emb|CAL51652.1| unnamed protein product, partial [Ostreococcus tauri]
Length = 340
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 120/300 (40%), Gaps = 58/300 (19%)
Query: 34 SALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFV----YFV 89
+AL TS+ +P L F E L+P + LHLYEAR+LALL+ A + YF
Sbjct: 44 AALSKEFTSVELPSLLFPRAETLLPGSAMTLHLYEARFLALLDAARANTGGLIAQLTYFE 103
Query: 90 LDPISISEYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKG- 148
+E E L IE V+R +GA V + G RVK+ +P++ G
Sbjct: 104 ------NESGEEGLRVNSSATLARIEWVKREAVGATVRVAGEARVKLEGVVSREPYITGV 157
Query: 149 --EVIPMQDTTSASPSD-----VSSKVLSVKEAVYSLNSLEIKLKAPKEA---------- 191
V M D + PSD V ++ AV + +L +L A
Sbjct: 158 YTHVPQMGDVGTYVPSDAELAQVREVTDYIENAVRDVMTLSDRLNGDASASAAEGEGEDE 217
Query: 192 ---VMQTY-----VLNSLQWAEKQPSLDCDEAFIP--------------------SLAER 223
M T+ + +++W + P++ + P + AER
Sbjct: 218 EIDGMWTHKEVGDLRTAMRWVDA-PAITIERIETPISMEDADWSRADGFTGHSELARAER 276
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDT-KQRLNNSLEFVEGSISMLAAKLAIQA 282
+SFA Q ST S L L + AM RL + +E ++ L AK+A+++
Sbjct: 277 LSFAVLQVAPASTPSALRTLISCRAVAMSAEHGLMDRLRLCVSVLEDQLNTLRAKVALKS 336
>gi|226503839|ref|NP_001145128.1| uncharacterized protein LOC100278355 [Zea mays]
gi|195651699|gb|ACG45317.1| hypothetical protein [Zea mays]
Length = 479
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
V L+P + +V++PS+ L+++E RY +VR+ + + ++I +
Sbjct: 273 VDLMPLFVMDVVLPSQKMALNIFEPRY-----RLMVRRIMEGNHRMGMVAID---SATGT 324
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A CGC V I E L G + + G R +IV+ + D + EV ++D S
Sbjct: 325 VADCGCEVEISECEPLPHGRFYLEVEGTRRFRIVRSWDQDGYRVAEVEWLKDIPLPEGSQ 384
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+++ + L I+ + ++++ A + LD + P E+
Sbjct: 385 GRRELMELANGASELARAYIR-----------HARDTVRTARRTRHLDLEGMPGPQDPEK 433
Query: 224 VSFAAFQPVSGSTQSELVKLQ-QEKLKAMDLRDTKQRLNNSLEFVEGS 270
SF + L+ L+ ++L + LRDT++R+++S+ + S
Sbjct: 434 FSFWL---------ANLISLRPSDRLDTLRLRDTRERISSSISLLRDS 472
>gi|194705368|gb|ACF86768.1| unknown [Zea mays]
gi|414867310|tpg|DAA45867.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 479
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
V L+P + +V++PS+ L+++E RY +VR+ + + ++I +
Sbjct: 273 VDLMPLFVMDVVLPSQKMALNIFEPRY-----RLMVRRIMEGNHRMGMVAID---SATGT 324
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A CGC V I E L G + + G R +IV+ + D + EV ++D S
Sbjct: 325 VADCGCEVEISECEPLPDGRFYLEVEGTRRFRIVRSWDQDGYRVAEVEWLKDIPLPEGSQ 384
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+++ + L I+ + ++++ A + LD + P E+
Sbjct: 385 GRRELMELANGASELARAYIR-----------HARDTVRTARRTRHLDLEGMPGPQDPEK 433
Query: 224 VSFAAFQPVSGSTQSELVKLQ-QEKLKAMDLRDTKQRLNNSLEFVEGS 270
SF + L+ L+ ++L + LRDT++R+++S+ + S
Sbjct: 434 FSFWL---------ANLISLRPSDRLDTLRLRDTRERISSSISLLRDS 472
>gi|293336194|ref|NP_001169658.1| uncharacterized LOC100383539 [Zea mays]
gi|224030665|gb|ACN34408.1| unknown [Zea mays]
gi|414867312|tpg|DAA45869.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 273
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
V L+P + +V++PS+ L+++E RY +VR+ + + ++I +
Sbjct: 67 VDLMPLFVMDVVLPSQKMALNIFEPRY-----RLMVRRIMEGNHRMGMVAID---SATGT 118
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A CGC V I E L G + + G R +IV+ + D + EV ++D S
Sbjct: 119 VADCGCEVEISECEPLPDGRFYLEVEGTRRFRIVRSWDQDGYRVAEVEWLKDIPLPEGSQ 178
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+++ + L I+ + ++++ A + LD + P E+
Sbjct: 179 GRRELMELANGASELARAYIR-----------HARDTVRTARRTRHLDLEGMPGPQDPEK 227
Query: 224 VSFAAFQPVSGSTQSELVKLQ-QEKLKAMDLRDTKQRLNNSLEFVEGS 270
SF + L+ L+ ++L + LRDT++R+++S+ + S
Sbjct: 228 FSFWL---------ANLISLRPSDRLDTLRLRDTRERISSSISLLRDS 266
>gi|414867311|tpg|DAA45868.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 458
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
V L+P + +V++PS+ L+++E RY +VR+ + + ++I +
Sbjct: 252 VDLMPLFVMDVVLPSQKMALNIFEPRY-----RLMVRRIMEGNHRMGMVAID---SATGT 303
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A CGC V I E L G + + G R +IV+ + D + EV ++D S
Sbjct: 304 VADCGCEVEISECEPLPDGRFYLEVEGTRRFRIVRSWDQDGYRVAEVEWLKDIPLPEGSQ 363
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+++ + L I+ + ++++ A + LD + P E+
Sbjct: 364 GRRELMELANGASELARAYIR-----------HARDTVRTARRTRHLDLEGMPGPQDPEK 412
Query: 224 VSFAAFQPVSGSTQSELVKLQ-QEKLKAMDLRDTKQRLNNSLEFVEGS 270
SF + L+ L+ ++L + LRDT++R+++S+ + S
Sbjct: 413 FSFWL---------ANLISLRPSDRLDTLRLRDTRERISSSISLLRDS 451
>gi|299115798|emb|CBN74361.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 189
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFV---YFVLDPISISEY 98
+ LLPF +++V+ P E+K LHLYEAR+L+L E A+ V FV D ++ Y
Sbjct: 62 IGLLPFPVDDVMCPGETKALHLYEARFLSLFENAIKNHGGCVGGAIFVDDVTNVDPY 118
>gi|170078663|ref|YP_001735301.1| putative ATP-dependent proteinase [Synechococcus sp. PCC 7002]
gi|169886332|gb|ACB00046.1| putative ATP-dependent proteinase [Synechococcus sp. PCC 7002]
Length = 212
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 41/238 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL PS LH++E RY ++ L + F +++P+ +
Sbjct: 11 LPLFPLP-ELVLFPSRPLPLHVFEFRYRIMMNTILEHDRRFGVLMVNPVDGT-------- 61
Query: 105 AARCGCLVLIENVERLDIGALVSIR-GVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC I + E+L G + + G R +++ + + P+ G V ++D + +
Sbjct: 62 IANVGCCAEIVHCEKLPDGRMKMLTIGQQRFRVLDYVREKPYRVGLVEWIEDDPTTG--N 119
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+SS + K+ + + L KL L+ E+ +P L
Sbjct: 120 LSSLAVDAKQVLMDVVGLSAKLAG-----------QDLELPEE----------LPDLPRE 158
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF ++GS L + +E+ ++L+DT++RL +E + + + LAA+ A++
Sbjct: 159 LSFW----IAGS----LYGVAEEQQALLELQDTQERLRREVEILTSTRNHLAARTALK 208
>gi|254431593|ref|ZP_05045296.1| ATP-dependent protease La [Cyanobium sp. PCC 7001]
gi|197626046|gb|EDY38605.1| ATP-dependent protease La [Cyanobium sp. PCC 7001]
Length = 215
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P E LH++E RY LL+ + + F DP + +
Sbjct: 9 LPLFPLP-DVVLFPQEVLPLHIFEPRYRMLLQTVMAEDRRFGVVRWDP-------KQKAM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
A+ C +I + D + + G R +++ + P+ G V ++D SP ++
Sbjct: 61 ASIGCCAEIIHCQTQDDDRSNIVTMGQQRFRVLDIVREAPYRVGLVSWIEDAVPDSPEEL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S SV +A+ + L KL K +L D +P L +
Sbjct: 121 QSLATSVNQALRDVVELTAKLVG------------------KPAALPSD---LPDLPREL 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF GS V Q+ L ++L DT +RL E ++ + LAA+ ++
Sbjct: 160 SFWI-----GSHLGGPVADHQQAL--LELTDTGERLRQEFELLDQTRRQLAARTVLK 209
>gi|298245103|ref|ZP_06968909.1| peptidase S16 lon domain protein [Ktedonobacter racemifer DSM
44963]
gi|297552584|gb|EFH86449.1| peptidase S16 lon domain protein [Ktedonobacter racemifer DSM
44963]
Length = 217
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 38 VNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISE 97
++ T++ +PL P ++ VL P LH++E RY ++++ +K F + P S+
Sbjct: 1 MSITAIELPLFPLDV--VLFPGTVMPLHIFEPRYRQMIQDCQRTQKPFGIVLTKPESV-- 56
Query: 98 YATEASFAARCGCLVLIENVERLDIG--ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQD 155
Y E ++ G +V + NVER + G L++I G R +IV + P+L V P D
Sbjct: 57 YLHEVPYS--VGTMVQMRNVERTEDGRFTLMAI-GTRRFRIVSQHRDRPYLSATVEPFMD 113
Query: 156 TTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKE 190
P+ + + ++ ++ N LE+ L+A E
Sbjct: 114 --DPEPAQILTLPMAQVCGLFR-NYLEMLLEAANE 145
>gi|219110219|ref|XP_002176861.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411396|gb|EEC51324.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 365
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
V +LPF EVL+ E+K L LYE R++ L ++A+ V L +++ +
Sbjct: 76 VCILPFPFVEVLLQGETKQLRLYEERFIKLFDDAMKNHSGVVAMGL----LADSGIIQTV 131
Query: 105 AARCGCLVLIENVERLD-IGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSAS--- 160
L IE RL+ G V+IR VGR ++V+ Q +P+LK + D +
Sbjct: 132 P-----LCEIEAYNRLEGFGIFVTIRAVGRAQLVEIVQQEPYLKAVCTELADKLPPNLEL 186
Query: 161 PSDVSSKVLSVKEAVYSLNSLEIKLKAPK 189
P+ V+S +++ + L+S+E +L+ K
Sbjct: 187 PNLVAS---NIENFMLLLSSMEHRLQQAK 212
>gi|393761769|ref|ZP_10350404.1| peptidase S16 lon domain-containing protein [Alishewanella agri
BL06]
gi|392607264|gb|EIW90140.1| peptidase S16 lon domain-containing protein [Alishewanella agri
BL06]
Length = 192
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F ++ L+P L ++E RY+ L++EA+ K+ F L+P +S+ + C
Sbjct: 8 FPLSSFLLPQGRMKLRVFEPRYVRLVKEAVSGKRAFAMASLNPF-VSQQHPDRILPLVCK 66
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLK-GEVIPMQDTTSASPSDVSSK 167
V +E+ E L G L ++I+GV R +IV+ +Q D L EV P D + S S S+
Sbjct: 67 --VEVEDFETLPDGLLGITIKGVARQRIVRRWQEDDKLHVAEVQPQSDWPTCSLSREQSQ 124
Query: 168 V 168
+
Sbjct: 125 L 125
>gi|427724271|ref|YP_007071548.1| peptidase S16 lon domain-containing protein [Leptolyngbya sp. PCC
7376]
gi|427355991|gb|AFY38714.1| peptidase S16 lon domain protein [Leptolyngbya sp. PCC 7376]
Length = 212
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL PS LH++E RY ++ L + F ++DP+ S
Sbjct: 11 LPLFPLP-EVVLFPSRPLPLHVFEFRYRIMMNTILENDRRFGVLMVDPVDGS-------- 61
Query: 105 AARCGCLVLIENVERLDIGALVSIR-GVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC + + E+L G + + G R +++ + + P+ G V ++D + +
Sbjct: 62 IANVGCCAEVVHCEKLPDGRMKMLTIGQQRFRVLDYVREKPYRVGLVEWIEDDPMS--GN 119
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+SS + K+ + + SL KL QP DE +P L
Sbjct: 120 LSSLAVDAKQILMDVVSLSAKLA-------------------DQPLELPDE--LPDLPRE 158
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ ++GS L + +E+ ++L++T++RL +E + + + LAA+ A++
Sbjct: 159 LSYW----IAGS----LYGVAEEQQALLELQNTQERLRREVEILTSTRNHLAARTALK 208
>gi|443321664|ref|ZP_21050709.1| peptidase S16, lon domain protein [Gloeocapsa sp. PCC 73106]
gi|442788643|gb|ELR98331.1| peptidase S16, lon domain protein [Gloeocapsa sp. PCC 73106]
Length = 213
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 41/238 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P LH++E RY ++ L F ++DP+ S
Sbjct: 12 LPLFPLP-KVVLFPGRPLPLHIFEFRYRIMMNTILETDSRFGVLMVDPVE--------SK 62
Query: 105 AARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A+ GC I + +RL D + G R +++++ + P+L G V +D ++ D
Sbjct: 63 VAQVGCCAEIVHFQRLPDDRMKILTMGQSRFRVLEYVREKPYLVGLVEWFEDQPTS--ED 120
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
++ K V E ++Q VL S + +++ L D +P L
Sbjct: 121 LTPKAQEV------------------ERLLQDVVLLSAKLTDQKIELPDD---LPKLPRD 159
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ S L + E+ +++RDT RL E ++ + + LAA+ A++
Sbjct: 160 LSYW--------IASNLYDVASEQQALLEMRDTGARLAREAEILKSTRNHLAARTALK 209
>gi|427703123|ref|YP_007046345.1| peptidase S16, lon domain-containing protein [Cyanobium gracile PCC
6307]
gi|427346291|gb|AFY29004.1| peptidase S16, lon domain protein [Cyanobium gracile PCC 6307]
Length = 222
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 40/239 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P E LH++E RY +L A+ + F DP ++
Sbjct: 9 LPLFPLP-DVVLFPQEVLPLHIFEPRYRMMLRTAMSEDRRFGVVRWDP--------QSKK 59
Query: 105 AARCGCL--VLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
A GC +L V+ D +V++ G R +++ + PF G V ++DT S S
Sbjct: 60 MAEVGCCAEILHCQVQDDDRSNIVTM-GQQRFRVLDIVRDTPFRVGMVSWIEDTVSESHE 118
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
++ + V A+ + L KL K SL D +P L
Sbjct: 119 ELETLTSDVTRALRDVVDLTGKLIG------------------KPSSLPAD---LPDLPR 157
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF + G V Q+ L +++ DT +RL E ++ + LAA+ ++
Sbjct: 158 ELSFWIGAHLGGP-----VADHQQAL--LEITDTGERLRQEFELLDQTRRQLAARTVLK 209
>gi|428777903|ref|YP_007169690.1| peptidase S16 lon domain-containing protein [Halothece sp. PCC
7418]
gi|428692182|gb|AFZ45476.1| peptidase S16 lon domain protein [Halothece sp. PCC 7418]
Length = 213
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 44/247 (17%)
Query: 39 NATSLVV---PLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISI 95
++TS+ V PL P + VL PS LH++E RY ++ L + F + DP+
Sbjct: 3 SSTSMAVRELPLFPLP-DVVLFPSRPLPLHIFEFRYRMMMNTILETDRRFGVLMFDPVK- 60
Query: 96 SEYATEASFAARCGCLVLIENVERLDIGALVSIR-GVGRVKIVKFFQADPFLKGEVIPMQ 154
+ AT GC I +RL G + + G R +++ + + P+ G V ++
Sbjct: 61 GDIAT-------VGCCAEISQFQRLPDGRMKMLTLGQQRFRVLNWVREKPYRVGLVEWIE 113
Query: 155 DTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDE 214
D + D+ + L+ + EA+++ V S + +++ L D
Sbjct: 114 DES----PDMDLRPLA----------------SDVEALLKDVVKLSAKLTDQKIELPDD- 152
Query: 215 AFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISML 274
IP L +SF S L + E+ ++++DTK RL+ E + + + L
Sbjct: 153 --IPDLPRELSFW--------VASNLYGVASEQQSLLEMQDTKARLDREAEILNSTRNHL 202
Query: 275 AAKLAIQ 281
AA+ A++
Sbjct: 203 AARTALK 209
>gi|303282211|ref|XP_003060397.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457868|gb|EEH55166.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 293
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVR-KKLFVYFVLDPISISEYATEAS 103
+P + F EVL+P ++ LHLYEAR+LALL+ A R F + P +
Sbjct: 84 LPAMLFPAAEVLLPGSAQTLHLYEARFLALLDHARNRTGGAFAHVTFAPDDEDDVDGGTR 143
Query: 104 FAARCGCLVLIENVERLD---IGALVSIRGVGRVKI--VKFFQAD--PFLKGEVIPM 153
L IE+VE+ + +GA+V++ G R+++ V+ AD P+L G P+
Sbjct: 144 LCT-IATLCRIEDVEKDETSGVGAVVTVIGESRLELRDVRNDPADSTPYLVGVFAPV 199
>gi|452820859|gb|EME27896.1| ATP-dependent Lon protease [Galdieria sulphuraria]
Length = 299
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V+PL P ++ V+ P + LH++E RY L KLF I Y
Sbjct: 83 VLPLFPLSL--VVQPDATIPLHIFEMRYRLLFNRIKEGDKLF--------GIVLYNKNND 132
Query: 104 FAARCGCLVLIENVERLDIGALVSIR-GVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
AR GCL+ + E L G ++++ G R ++ + PF+ V+ ++D
Sbjct: 133 SVARYGCLMELIRFEPLPDGRMLTVNVGKERFRVNHIIKDKPFITASVVTVEDI------ 186
Query: 163 DVSSKVLSVKEAVYS 177
D + S+ EAV++
Sbjct: 187 DCDDTIFSLGEAVWT 201
>gi|302851853|ref|XP_002957449.1| hypothetical protein VOLCADRAFT_119690 [Volvox carteri f.
nagariensis]
gi|300257253|gb|EFJ41504.1| hypothetical protein VOLCADRAFT_119690 [Volvox carteri f.
nagariensis]
Length = 388
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 30/191 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYE-ARYLALLEEALVR-KKLFVYFVLDPISISEY---- 98
+PLLPF EVL P K+L LY+ + Y+ LLEE L ++ V+ ++P + +
Sbjct: 52 LPLLPFTAKEVLPPGSCKVLRLYDNSGYMLLLEELLSSPHQMLVHSSVEPTNSTSSGASA 111
Query: 99 -----ATEASFAARC-GCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIP 152
A EA C +V + +V++ + G L+ ++ GRV + Q P+ + V+P
Sbjct: 112 TSRLGAYEAGGFVFCLSTIVKVIDVKQTESGVLLRVQAEGRVAVKSLAQTQPYFRAVVVP 171
Query: 153 MQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEA----VMQTYVLNSLQWAEKQP 208
+ D + + + +L K KAP+ A M P
Sbjct: 172 VTDAVDL-------------DRLQDVQNLAAKFKAPETANLQRAMHCRTAEGRDTTTAGP 218
Query: 209 SLDCDEAFIPS 219
CD+ F PS
Sbjct: 219 LGSCDD-FQPS 228
>gi|420865664|ref|ZP_15329053.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0303]
gi|420870457|ref|ZP_15333839.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0726-RA]
gi|420987463|ref|ZP_15450619.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0206]
gi|421042004|ref|ZP_15505012.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0116-R]
gi|392064380|gb|EIT90229.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0303]
gi|392069927|gb|EIT95774.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0726-RA]
gi|392181742|gb|EIV07393.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0206]
gi|392222932|gb|EIV48455.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0116-R]
Length = 211
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V P+ P + VL+P E L ++E RY+A++ + L F + I+
Sbjct: 4 VTPMFP--LQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGD 58
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
G + + E L VS G GR++I ++ + DP+ + EV P P
Sbjct: 59 VRHDVGTAARVLDCESLGADRFAVSCEGAGRIRITRWLEDDPYPRAEVEPW-------PD 111
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLK 186
+ +VL + +LN ++++++
Sbjct: 112 EPDERVLPLS----ALNEVQVRIE 131
>gi|428161509|gb|EKX30877.1| hypothetical protein GUITHDRAFT_50701, partial [Guillardia theta
CCMP2712]
Length = 112
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 48 LPFNINEVLVPSESKILHLYEARYLALLEEAL 79
+PF I ++++P E+K LHLYEAR+LAL EEAL
Sbjct: 20 MPFPIEDMILPGETKKLHLYEARFLALFEEAL 51
>gi|419712502|ref|ZP_14239962.1| hypothetical protein OUW_23271 [Mycobacterium abscessus M93]
gi|382937757|gb|EIC62102.1| hypothetical protein OUW_23271 [Mycobacterium abscessus M93]
Length = 211
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V P+ P + VL+P E L ++E RY+A++ + L F + I+
Sbjct: 4 VTPMFP--LQSVLLPGEPVPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGD 58
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
G + + E L VS G GR++I ++ + DP+ + EV P P
Sbjct: 59 VRHDVGTAARVLDCESLGADRFAVSCEGAGRIRITRWLEDDPYPRAEVEPW-------PD 111
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLK 186
+ +VL + +LN ++++++
Sbjct: 112 EPDERVLPLS----ALNEVQVRIE 131
>gi|419713012|ref|ZP_14240441.1| hypothetical protein S7W_00975 [Mycobacterium abscessus M94]
gi|382947065|gb|EIC71346.1| hypothetical protein S7W_00975 [Mycobacterium abscessus M94]
Length = 205
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + VL+P E L ++E RY+A++ + L + F + I+ G
Sbjct: 2 FPLQSVLLPGEPLPLRIFEPRYVAMIRDVLAADRAFGVVL---IARGREVGGGDVRHDVG 58
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKV 168
+ + E L VS G GR++I ++ + DP+ + EV P P + +V
Sbjct: 59 TAARVLDCESLGADRFAVSCEGAGRIRITRWLEDDPYPRAEVEPW-------PDEPDERV 111
Query: 169 LSVKEAVYSLNSLEIKLK 186
L + +LN ++++++
Sbjct: 112 LPLS----ALNEVQVRIE 125
>gi|420874901|ref|ZP_15338277.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0726-RB]
gi|421045255|ref|ZP_15508255.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0116-S]
gi|392066376|gb|EIT92224.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0726-RB]
gi|392234708|gb|EIV60206.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
4S-0116-S]
Length = 208
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + VL+P E L ++E RY+A++ + L F + I+ G
Sbjct: 5 FPLQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGDVRHDVG 61
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKV 168
+ + E L VS G GR++I ++ + DP+ + EV P P + +V
Sbjct: 62 TAARVLDCESLGADRFAVSCEGAGRIRITRWLEDDPYPRAEVEPW-------PDEPDERV 114
Query: 169 LSVKEAVYSLNSLEIKLK 186
L + +LN ++++++
Sbjct: 115 LPLS----ALNEVQVRIE 128
>gi|352096466|ref|ZP_08957293.1| peptidase S16 lon domain protein [Synechococcus sp. WH 8016]
gi|351676116|gb|EHA59270.1| peptidase S16 lon domain protein [Synechococcus sp. WH 8016]
Length = 220
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL PS+ LH++E+RY +L+ L + F DP + +
Sbjct: 9 LPLFPLP-DVVLFPSDVLPLHIFESRYRMMLQSVLETDRRFGVVRWDP-------NQQTM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
AA C +I++ D + + G R +++ + PF V ++D + S++
Sbjct: 61 AAVGCCAEVIQHQTGDDGRSNIVTLGQQRFRVLNVTRETPFRSAMVSWIEDEPVDNTSEL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S +V +A+ + L KL K ++ +P L +
Sbjct: 121 ESLAATVTQALKDVVELTGKLTDSKSSLPDD---------------------LPDLPREL 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G V QQ+ L ++L +T+ RL E ++ + LAA+ ++
Sbjct: 160 SFWIGAHLGGP-----VADQQQDL--LELTNTRTRLEQEFEMLDETRRQLAARTVLR 209
>gi|397172177|ref|ZP_10495571.1| peptidase S16 lon domain-containing protein [Alishewanella
aestuarii B11]
gi|396086189|gb|EJI83805.1| peptidase S16 lon domain-containing protein [Alishewanella
aestuarii B11]
Length = 192
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + L+P L ++E RY+ L++EA+ K+ F L+P+ +S+ + C
Sbjct: 8 FPLGSFLLPRGKMKLRVFEPRYVRLVKEAVSGKRPFAMATLNPL-VSQQHPDRILPLVCK 66
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLK-GEVIPMQDTTS 158
V +++ E L G L ++I G+ R +I++ +Q D L EV P D S
Sbjct: 67 --VSVDDFETLPDGLLGITISGISRQRIIRRWQEDDKLHVAEVAPETDWHS 115
>gi|158334955|ref|YP_001516127.1| ATP-dependent protease La [Acaryochloris marina MBIC11017]
gi|158305196|gb|ABW26813.1| ATP-dependent protease La (LON) domain protein [Acaryochloris
marina MBIC11017]
Length = 216
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 39/238 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P LH++E RY ++ L + F + DP
Sbjct: 12 LPLFPLP-DVVLFPGRPLPLHIFEYRYRIMMNTILEEDRQFGVLMWDP--------NKGE 62
Query: 105 AARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
AA GC I ERL D ++ G R K++ + + P+ G V ++D D
Sbjct: 63 AAVVGCCAEITKHERLPDDRIMILTLGRQRFKVLHYVREKPYRVGLVEWIEDQPLPVDHD 122
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+ + V + + + L KL E+ +L D IPSL
Sbjct: 123 LQALTTDVTQLLQDVVRLSAKL------------------TEQDINLPDD---IPSLPVD 161
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ G+ L+Q+ L ++++DT+ RL E + + + LAA+ ++
Sbjct: 162 LSYWVASNFYGAA------LEQQSL--LEMQDTQARLEREAEILTSTRNHLAARTVLK 211
>gi|397633702|gb|EJK71097.1| hypothetical protein THAOC_07496 [Thalassiosira oceanica]
Length = 399
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYF-------VLDPISIS 96
+P+LPF ++L+ +S L+L+E R+ L +++++ V ++ + +
Sbjct: 59 TIPILPFPFTDILLQGQSTQLNLFEERFHDLFDDSMMNHHGMVAMGLLAGNGMITTMPLC 118
Query: 97 EYATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIV--KFFQADPFLKGEVIPMQ 154
E ++ A + + + + I LVSIR VGR KI K Q +P++ V+
Sbjct: 119 EVSSFTRVGADANFVPMGDGMGNGSI--LVSIRCVGRCKINEPKLMQEEPYMVARVVETV 176
Query: 155 DTTSASPSDVSSKVL 169
D A S V L
Sbjct: 177 DDDIAVASGVGGTGL 191
>gi|418422329|ref|ZP_12995502.1| hypothetical protein MBOL_40480 [Mycobacterium abscessus subsp.
bolletii BD]
gi|420918267|ref|ZP_15381570.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0125-S]
gi|420923434|ref|ZP_15386730.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0728-S]
gi|421010137|ref|ZP_15473246.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0119-R]
gi|421020087|ref|ZP_15483143.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0122-S]
gi|421025888|ref|ZP_15488931.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0731]
gi|421036967|ref|ZP_15499984.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0930-S]
gi|363996245|gb|EHM17462.1| hypothetical protein MBOL_40480 [Mycobacterium abscessus subsp.
bolletii BD]
gi|392111158|gb|EIU36928.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0125-S]
gi|392128087|gb|EIU53837.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0728-S]
gi|392195743|gb|EIV21362.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0119-R]
gi|392205810|gb|EIV31393.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0122-S]
gi|392209411|gb|EIV34983.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0731]
gi|392220819|gb|EIV46343.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0930-S]
Length = 211
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V P+ P + VL+P E L ++E RY+A++ + L F + I+
Sbjct: 4 VTPMFP--LQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGD 58
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
G + + E L V G GR++I ++ + DP+ + EV P P
Sbjct: 59 VRHDVGTAARVLDCESLGADRFAVRCEGAGRIRITRWLEDDPYPRAEVEPW-------PD 111
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLK 186
+ +VL + +LN ++++++
Sbjct: 112 EPDERVLPLS----ALNEVQVRIE 131
>gi|33866672|ref|NP_898231.1| ATP-dependent protease La [Synechococcus sp. WH 8102]
gi|33633450|emb|CAE08655.1| ATP-dependent protease La (LON) domain [Synechococcus sp. WH 8102]
Length = 216
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 38/243 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P + LH++E+RY LL+ L K F ++P E
Sbjct: 9 LPLFPLP-DVVLFPQQLLPLHIFESRYRMLLQTVLETDKRFGIVRINP--------ENGE 59
Query: 105 AARCGCLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC + + D G + + G R +++ + PF V M+D ++
Sbjct: 60 MAEIGCCAEVLQHQTTDDGRSYIVTLGQQRFRVLNVIRETPFRSAMVSWMEDEPVEDHAE 119
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+++ V A+ + SL K++ +Q L D +P L
Sbjct: 120 LNALRDKVSSALNDVFSLTAKIQG------------------RQEELPDD---LPDLPRE 158
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQAL 283
+SF G+ +Q+ L ++L DT +RL E ++ + LAA+ + L
Sbjct: 159 LSFWI-----GAHLDNRAAPEQQTL--LELSDTNERLERQFEMLDHTRRQLAARTVLMDL 211
Query: 284 EMQ 286
+ Q
Sbjct: 212 KEQ 214
>gi|116619903|ref|YP_822059.1| peptidase S16, lon domain-containing protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116223065|gb|ABJ81774.1| peptidase S16, lon domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 209
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 28/193 (14%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
++PL P + V+ P LH++E RY ++ A + D +
Sbjct: 5 LIPLFPLQL--VVFPRTQLPLHIFEERYKEMVGNA----------IRDSTEFGVVLAKDE 52
Query: 104 FAARCGCLVLIENV------ERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTT 157
GC VL++ V R+DI RG R +IV+ + +L+ EV D
Sbjct: 53 GIVNAGCTVLVDKVLEMYPDGRMDI----MTRGQQRFEIVRLIEEKDYLQAEVNYFDDDD 108
Query: 158 -SASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAF 216
+ P D+ S+ L+ +A+ LN+ + E ++ L S Q A+ P LD
Sbjct: 109 LTPVPEDLRSQALTNYQALSGLNA----ARGHGEPNLEDLQL-SFQLAQAIPDLDFLNLL 163
Query: 217 IPSLAERVSFAAF 229
+ +E V F
Sbjct: 164 LRQRSEAVRLQHF 176
>gi|359457385|ref|ZP_09245948.1| ATP-dependent protease La [Acaryochloris sp. CCMEE 5410]
Length = 216
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 39/238 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P LH++E RY ++ L + F + DP
Sbjct: 12 LPLFPLP-DVVLFPGRPLPLHIFEYRYRIMMNTILEEDRQFGVLMWDP--------NKGE 62
Query: 105 AARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
AA GC I ERL D ++ G R K++ + + P+ G V ++D D
Sbjct: 63 AAVVGCCAEITKHERLPDDRIMILTLGRQRFKVLHYVREKPYRVGLVEWIEDQPLPVDQD 122
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+ + V + + + L KL E+ +L D IPSL
Sbjct: 123 LQALTTDVTQLLQDVVRLSAKL------------------TEQDINLPDD---IPSLPVD 161
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ G+ L+Q+ L ++++DT+ RL E + + + LAA+ ++
Sbjct: 162 LSYWVASNFYGAA------LEQQSL--LEMQDTQARLEREAEILMSTRNHLAARTVLK 211
>gi|357121347|ref|XP_003562382.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Brachypodium distachyon]
Length = 480
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 36/240 (15%)
Query: 33 RSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDP 92
R + T V L+P + +V++P + L+++E RY ++ + +D
Sbjct: 262 RKSEHETTTYAGVDLMPLFVMDVVLPCQKMALNIFEPRYRLMVRRIMEGNHRMGMVAIDS 321
Query: 93 ISISEYATEASFAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVI 151
++ + A CGC V I E L G + + G R +I++ + D + E+
Sbjct: 322 VTGT--------VADCGCEVEILECEPLPDGRFYLEVEGSRRFRILRSWDEDGYRVAEIE 373
Query: 152 PMQDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLN---SLQWAEKQP 208
QD +S+ E L + E + +TY+ +++ A +
Sbjct: 374 WFQD-------------VSLPEGSQERKDLIERANGASE-LARTYIRRARETIRPARRTR 419
Query: 209 SLDCDEAFIPSLAERVSFAAFQPVSGSTQSELVKLQ-QEKLKAMDLRDTKQRLNNSLEFV 267
LD + P E+ SF L+ L+ +KL + LRDT+ R++ SL +
Sbjct: 420 HLDLESMPGPQDPEKFSFWLVN---------LINLRPSDKLDLLRLRDTRDRISRSLRLL 470
>gi|169631243|ref|YP_001704892.1| hypothetical protein MAB_4165 [Mycobacterium abscessus ATCC 19977]
gi|420911813|ref|ZP_15375125.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0125-R]
gi|420984817|ref|ZP_15447984.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0728-R]
gi|421014990|ref|ZP_15478065.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0122-R]
gi|421031473|ref|ZP_15494503.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0930-R]
gi|169243210|emb|CAM64238.1| Conserved hypothetical protein (peptidase?) [Mycobacterium
abscessus]
gi|392113807|gb|EIU39576.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0125-R]
gi|392169813|gb|EIU95491.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0728-R]
gi|392198062|gb|EIV23676.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0122-R]
gi|392219355|gb|EIV44880.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0930-R]
Length = 208
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + VL+P E L ++E RY+A++ + L F + I+ G
Sbjct: 5 FPLQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGDVRHDVG 61
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKV 168
+ + E L V G GR++I ++ + DP+ + EV P P + +V
Sbjct: 62 TAARVLDCESLGADRFAVRCEGAGRIRITRWLEDDPYPRAEVEPW-------PDEPDERV 114
Query: 169 LSVKEAVYSLNSLEIKLK 186
L + +LN ++++++
Sbjct: 115 LPLS----ALNEVQVRIE 128
>gi|318042655|ref|ZP_07974611.1| Lon protease domain-containing protein [Synechococcus sp. CB0101]
Length = 224
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P E LH++E RY +L L + F DP E
Sbjct: 9 LPLFPLP-DVVLFPQEVLPLHIFEPRYRMMLRTVLDTDRRFGVVRWDP-------QEGRM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
A C +++ + D + + G R ++++ + PF G V ++D + +
Sbjct: 61 ADVGCCAEILQCQTQSDDRSNIVTLGQQRFRVLEVVREAPFKVGLVSWIEDDHPENHDRL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S +V++A+ + L KL K SL D +P L +
Sbjct: 121 SDLSSNVEQALKDVVELTGKLMG------------------KPTSLPTD---LPDLPREL 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G V QQ+ L +++ DT++RL E ++ + LAA+ +Q
Sbjct: 160 SFWIGSHLGGP-----VADQQQTL--LEITDTEERLRQEFELLDETRRQLAARTVLQ 209
>gi|420929095|ref|ZP_15392374.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-1108]
gi|420968784|ref|ZP_15431987.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0810-R]
gi|420979433|ref|ZP_15442610.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0212]
gi|392126083|gb|EIU51834.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-1108]
gi|392163711|gb|EIU89400.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
6G-0212]
gi|392244440|gb|EIV69918.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
3A-0810-R]
Length = 205
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + VL+P E L ++E RY+A++ + L F + I+ G
Sbjct: 2 FPLQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGDVRHDVG 58
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKV 168
+ + E L V G GR++I ++ + DP+ + EV P P + +V
Sbjct: 59 TAARVLDCESLGADRFAVRCEGAGRIRITRWLEDDPYPRAEVEPW-------PDEPDERV 111
Query: 169 LSVKEAVYSLNSLEIKLK 186
L + +LN ++++++
Sbjct: 112 LPLS----ALNEVQVRIE 125
>gi|108805739|ref|YP_645676.1| peptidase S16, lon-like protein [Rubrobacter xylanophilus DSM 9941]
gi|108766982|gb|ABG05864.1| peptidase S16, lon-like protein [Rubrobacter xylanophilus DSM 9941]
Length = 217
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P NI VL+P + LH++E RY ++ E L R F + D E
Sbjct: 6 IPLFPLNI--VLMPGAPQALHIFEERYKQMVNECLERGSEFGMVLSDESGTRE------- 56
Query: 105 AARCGCLV-LIENVERLDIGA-LVSIRGVGRVKIVKFFQADPFLKGEV 150
GC ++E V R + G L+ + G R ++ P+ GEV
Sbjct: 57 ---VGCTARIVELVRRFEDGRMLILVEGSRRFRLRSILAGRPYYVGEV 101
>gi|113952798|ref|YP_729611.1| ATP-dependent protease La [Synechococcus sp. CC9311]
gi|113880149|gb|ABI45107.1| ATP-dependent protease La [Synechococcus sp. CC9311]
Length = 220
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL PS+ LH++E+RY +L+ L + F DP + +
Sbjct: 9 LPLFPLP-DVVLFPSDVLPLHIFESRYRMMLQSVLETDRRFGVVRWDP-------NQQTM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
AA C +I++ D + + G R +++ + PF V ++D + S++
Sbjct: 61 AAVGCCAEVIQHQTGDDGRSNIVTLGQQRFRVLNVTREMPFRSAMVSWIEDEPVDNTSEL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S +V +A+ + L KL K SL D +P L +
Sbjct: 121 ESLAATVTQALKDVVELTGKLTDSKS------------------SLPDD---LPDLPREL 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G V QQ+ L ++L T+ RL E ++ + LAA+ ++
Sbjct: 160 SFWIGAHLGGP-----VADQQQDL--LELTSTRTRLEQEFEMLDETRRQLAARTVLR 209
>gi|87125024|ref|ZP_01080871.1| ATP-dependent protease, La (LON) domain [Synechococcus sp. RS9917]
gi|86167344|gb|EAQ68604.1| ATP-dependent protease, La (LON) domain [Synechococcus sp. RS9917]
Length = 218
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P E LH++E+RY +L+ L + F DP +A
Sbjct: 9 LPLFPLP-DVVLFPREVLPLHIFESRYRMMLKSVLEDDRRFGVVRWDP------QNQAMA 61
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
A C C ++++ D + + G R +++ + PF V ++D + SD+
Sbjct: 62 AVGC-CAEVLQHQTAEDGRSNIVTLGQQRFRVLDVVRETPFRTAMVSWIEDEPVTAESDL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S SV A+ + L KL SL D +P L +
Sbjct: 121 ESLTRSVDHALRDVVELTGKLTG------------------SPASLPDD---LPDLPREL 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G V QQ++L ++L +T++RL ++ + LAA+ ++
Sbjct: 160 SFWIGAHLGGP-----VADQQQEL--LELTNTRERLEQEFAMLDETRRQLAARTVLR 209
>gi|123969241|ref|YP_001010099.1| ATP-dependent protease La [Prochlorococcus marinus str. AS9601]
gi|123199351|gb|ABM70992.1| ATP-dependent protease La (LON) domain-containing protein
[Prochlorococcus marinus str. AS9601]
Length = 218
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 38/238 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P E LH++E+RY +L+ L +F DP S S
Sbjct: 9 LPLFPLP-EVVLFPQEVLPLHIFESRYRIMLQTVLESDSMFGVIKWDPTSKS-------- 59
Query: 105 AARCGCLV-LIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC +I++ D + + G R +I++ ++ PF V + D
Sbjct: 60 MANVGCCAQIIKHQTAEDGRSNIITLGQQRFQILEITRSTPFCSAMVSWISDENIDDLQK 119
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+ S SVKEA+ + +L KL K+ + +K P+ D
Sbjct: 120 LDSLRDSVKEALGDVITLTSKLTNTKKNL-----------PDKLPNNPMD---------- 158
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF + G E +L +E R+T RL E ++ + LAA+ A++
Sbjct: 159 LSFWIGAHLGGPVAEEQQRLLEE-------RNTFTRLQREYEMLDHTRKQLAARTALK 209
>gi|365872165|ref|ZP_09411704.1| hypothetical protein MMAS_41060 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|420933404|ref|ZP_15396679.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
1S-151-0930]
gi|420957989|ref|ZP_15421223.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0107]
gi|420964037|ref|ZP_15427261.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-1231]
gi|420993933|ref|ZP_15457079.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0307]
gi|420999709|ref|ZP_15462844.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0912-R]
gi|421004231|ref|ZP_15467353.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0912-S]
gi|363994505|gb|EHM15726.1| hypothetical protein MMAS_41060 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392138163|gb|EIU63900.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
1S-151-0930]
gi|392178491|gb|EIV04144.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0912-R]
gi|392180035|gb|EIV05687.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0307]
gi|392192934|gb|EIV18558.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0912-S]
gi|392246950|gb|EIV72427.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-1231]
gi|392247715|gb|EIV73191.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0107]
Length = 211
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V P+ P + VL+P E L ++E RY+A++ + L F + I+
Sbjct: 4 VTPMFP--LQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGD 58
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
G + + E L VS G R++I ++ + DP+ + EV P P
Sbjct: 59 VRHDVGTAARVLDCESLGADRFAVSCEGAHRIRITRWLEDDPYPRAEVQPW-------PD 111
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLK 186
+ +VL + +LN ++++++
Sbjct: 112 EPDERVLPLS----ALNEVQVRIE 131
>gi|375111805|ref|ZP_09758000.1| peptidase S16 lon domain-containing protein [Alishewanella jeotgali
KCTC 22429]
gi|374568119|gb|EHR39307.1| peptidase S16 lon domain-containing protein [Alishewanella jeotgali
KCTC 22429]
Length = 192
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + L+P L ++E RY+ L++EA+ K+ F L+P+ +S+ + C
Sbjct: 8 FPLGSFLLPRGKMKLRVFEPRYVRLVKEAVSGKRPFAMATLNPL-VSQQHPDRILPLVCK 66
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLK-GEVIPMQDTTS 158
V +++ E L G L ++I G+ R +I++ +Q + L EV P D S
Sbjct: 67 --VSVDDFETLPDGLLGITISGISRQRIIRRWQEEDKLHVAEVAPETDWHS 115
>gi|157414107|ref|YP_001484973.1| ATP-dependent protease La [Prochlorococcus marinus str. MIT 9215]
gi|157388682|gb|ABV51387.1| ATP-dependent protease La (LON) domain [Prochlorococcus marinus
str. MIT 9215]
Length = 218
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P E LH++E+RY +L+ L +F DP T S
Sbjct: 9 LPLFPLP-EVVLFPQEVLPLHIFESRYRIMLQSVLESDSMFGVIKWDP-------TTKSM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
A C +I++ D + + G R ++++ ++ PF V + D +
Sbjct: 61 ANVGCCAQIIKHQTAEDGRSNIITLGQQRFQVLEIMRSTPFCSAMVSWINDDNIDDFQKL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S SVKEA+ + +L KL ++ + +K P+ D +
Sbjct: 121 DSLKDSVKEALSDVINLTSKLTNTRKNL-----------PDKLPNNPID----------L 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G E +L +EK +T RL E ++ + LAA+ A++
Sbjct: 160 SFWIGAHLGGPVAEEQQRLLEEK-------NTFNRLQREYEMLDHTRKQLAARTALK 209
>gi|33241111|ref|NP_876053.1| ATP-dependent protease La (LON) domain [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33238641|gb|AAQ00706.1| Uncharacterized protein [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 220
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P E LH++E+RY +L+ L F L+P AT+
Sbjct: 9 LPLFPLP-DVVLFPQEVLPLHIFESRYRIMLQTVLEADSRFGVIRLNP------ATKKIA 61
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
C C +I++ D + + G R ++++ + PF V + D + ++
Sbjct: 62 DVGC-CAQIIKHQTSEDGRSNLVTLGQQRFRVLEILREAPFYTAMVSWVDDGIDSDQDEL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S SV A+ + SL KL + + + +P++ +
Sbjct: 121 SDLSNSVLIALKDVVSLTGKLTDSERNLPEG---------------------LPTIPREL 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G E Q+KL +++ DTK RL+ + ++ + LAA+ A++
Sbjct: 160 SFWVASHLGGPVADE-----QQKL--LEMLDTKHRLSREYQMLDHTRKQLAARTALK 209
>gi|420939354|ref|ZP_15402623.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
1S-152-0914]
gi|420946787|ref|ZP_15410037.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
1S-154-0310]
gi|420953816|ref|ZP_15417058.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0626]
gi|392144869|gb|EIU70594.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
1S-152-0914]
gi|392152729|gb|EIU78436.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
2B-0626]
gi|392153817|gb|EIU79523.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
1S-154-0310]
Length = 208
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + VL+P E L ++E RY+A++ + L F + I+ G
Sbjct: 5 FPLQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGDVRHDVG 61
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKV 168
+ + E L VS G R++I ++ + DP+ + EV P P + +V
Sbjct: 62 TAARVLDCESLGADRFAVSCEGAHRIRITRWLEDDPYPRAEVQPW-------PDEPDERV 114
Query: 169 LSVKEAVYSLNSLEIKLK 186
L + +LN ++++++
Sbjct: 115 LPLS----ALNEVQVRIE 128
>gi|418250182|ref|ZP_12876468.1| hypothetical protein MAB47J26_15732 [Mycobacterium abscessus 47J26]
gi|420943667|ref|ZP_15406923.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
1S-153-0915]
gi|421051271|ref|ZP_15514265.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|353450262|gb|EHB98657.1| hypothetical protein MAB47J26_15732 [Mycobacterium abscessus 47J26]
gi|392148764|gb|EIU74482.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
1S-153-0915]
gi|392239874|gb|EIV65367.1| ATP-dependent protease La domain protein [Mycobacterium massiliense
CCUG 48898]
Length = 205
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + VL+P E L ++E RY+A++ + L F + I+ G
Sbjct: 2 FPLQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGDVRHDVG 58
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKV 168
+ + E L VS G R++I ++ + DP+ + EV P P + +V
Sbjct: 59 TAARVLDCESLGADRFAVSCEGAHRIRITRWLEDDPYPRAEVQPW-------PDEPDERV 111
Query: 169 LSVKEAVYSLNSLEIKLK 186
L + +LN ++++++
Sbjct: 112 LPLS----ALNEVQVRIE 125
>gi|237797551|ref|ZP_04586012.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|237805403|ref|ZP_04592107.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|237805959|ref|ZP_04592663.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331020401|gb|EGI00458.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331026510|gb|EGI06565.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331027069|gb|EGI07124.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 196
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
+ +PL P +N VL P L L+EARYL ++ + + + F + SE +
Sbjct: 1 MTLPLFP--LNAVLFPGCVLDLQLFEARYLDMIGRCMKQGQGFGVVCI--TEGSEAGSVP 56
Query: 103 SFAARCGCLVLIENVERLDIGALVSIRGVG--RVKIVKF-FQADPFLKGEV 150
+R GC L+E+ E+ D G L+ IR VG R ++V Q D L EV
Sbjct: 57 DGYSRIGCEALVEDFEQQDNG-LLGIRVVGGRRFRVVAAEVQRDQLLVAEV 106
>gi|126697035|ref|YP_001091921.1| ATP-dependent protease La [Prochlorococcus marinus str. MIT 9301]
gi|126544078|gb|ABO18320.1| ATP-dependent protease La (LON) domain-containing protein
[Prochlorococcus marinus str. MIT 9301]
Length = 218
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P E LH++E+RY +L+ L +F DP T S
Sbjct: 9 LPLFPLP-EVVLFPQEVLPLHIFESRYRMMLQSVLEGDSMFGVIKFDP-------TTKSM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
A C +I++ D + + G R ++++ ++ PF V + D +
Sbjct: 61 ANVGCCAQIIKHQTAEDGRSNIITLGQQRFQVLEIMRSTPFYSAMVSWISDDNIDDFQKL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S SVKEA+ + +L KL K+ + +K P D +
Sbjct: 121 DSLKDSVKEALSDVINLTSKLTNTKKNL-----------PDKLPDNPMD----------L 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G E KL +E R+T RL E ++ + LAA+ ++
Sbjct: 160 SFWIGAHLGGPVAEEQQKLLEE-------RNTFTRLQREYEMLDHTRKQLAARTVLK 209
>gi|41410021|ref|NP_962857.1| hypothetical protein MAP3923 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|417748108|ref|ZP_12396557.1| peptidase S16, lon domain protein [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440779388|ref|ZP_20958110.1| hypothetical protein D522_22393 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41398854|gb|AAS06473.1| hypothetical protein MAP_3923 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|336460335|gb|EGO39235.1| peptidase S16, lon domain protein [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436720181|gb|ELP44479.1| hypothetical protein D522_22393 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 213
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + L+P + L ++E RY AL+ L + F + I+ ARC
Sbjct: 10 FPLESALLPDQDLPLRIFEPRYGALVRHCLDTGEQFGVVL-----IARGREVGGGDARCD 64
Query: 110 CLVLIENVERLDIGA---LVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSAS 160
VL V+ +D GA L++ R R+++ ++ DP+ + V+P D A+
Sbjct: 65 VGVLSRIVDCVDQGAGRYLLNCRTGQRIRVSEWLPDDPYPRATVMPWPDEPGAA 118
>gi|420892207|ref|ZP_15355554.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0422]
gi|420896034|ref|ZP_15359373.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0708]
gi|420905541|ref|ZP_15368859.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-1212]
gi|392079467|gb|EIU05294.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0422]
gi|392095346|gb|EIU21141.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0708]
gi|392103445|gb|EIU29231.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-1212]
Length = 211
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 17/144 (11%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V P+ P + VL+P E L ++E RY+A++ + L F + I+
Sbjct: 4 VTPMFP--LQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGD 58
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
G + + E L VS G R++I + + DP+ + EV P P
Sbjct: 59 VRHDVGTAARVLDCESLGADRFAVSCEGAHRIRITSWLEDDPYPRAEVQPW-------PD 111
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLK 186
+ +VL + +LN ++++++
Sbjct: 112 EPDERVLPLS----ALNEVQVRIE 131
>gi|443318599|ref|ZP_21047847.1| peptidase S16, lon domain protein [Leptolyngbya sp. PCC 6406]
gi|442781786|gb|ELR91878.1| peptidase S16, lon domain protein [Leptolyngbya sp. PCC 6406]
Length = 213
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 44/247 (17%)
Query: 39 NATSLVVPLLP-FNINE-VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISIS 96
+++SL V LP F + E VL P LH++E RY ++ L + F + DP
Sbjct: 3 SSSSLAVRELPLFPLPELVLFPGAHLPLHIFEFRYRIMMNTVLQGDRRFGVLMTDP---- 58
Query: 97 EYATEASFAARCGCLVLIENVERL--DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQ 154
E AR GC I + +RL D ++++ G R +++ + + P+ G V ++
Sbjct: 59 ----ETGQPARIGCCAEILHCQRLPDDRMKMLTL-GQQRFRVLDYVREKPYRVGLVEWIE 113
Query: 155 DTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDE 214
D + D+ + V+ V + + + L KL + K + PS
Sbjct: 114 DQPTE--QDLENLVVEVDQLLRDVVRLSAKLTSRKVEL---------------PS----- 151
Query: 215 AFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISML 274
IP L +S+ S L E+ ++++DT RL E + + + L
Sbjct: 152 -NIPDLPLELSYW--------IASNLYDAADEQQALLEIQDTGSRLEREAEILTTTRNHL 202
Query: 275 AAKLAIQ 281
AA+ A++
Sbjct: 203 AARTALK 209
>gi|78211870|ref|YP_380649.1| peptidase S16, lon-like [Synechococcus sp. CC9605]
gi|78196329|gb|ABB34094.1| Peptidase S16, lon-like [Synechococcus sp. CC9605]
Length = 211
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 41/242 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P + LH++E+RY LL+ L K F ++P E
Sbjct: 9 LPLFPLP-DVVLFPQQLLPLHIFESRYRMLLQTVLETDKRFGIVRINP--------ENGE 59
Query: 105 AARCGCLVLIENVERLDIGA--LVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
A GC + + + G +VS+ G R +++ + P+ G V ++D A
Sbjct: 60 MAEIGCCAEVLQHQTTEDGRSYIVSL-GQQRFRLLNITRETPYRTGMVSWLEDEPVADTD 118
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
++S V EA+ + L KL+ ++ L D +P L
Sbjct: 119 QLNSLRDKVSEALNDVVQLTSKLQ------------------NREVELPED---LPDLPR 157
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQA 282
+SF + L + E+ ++L DT +RL+ E ++ + LAA+ +
Sbjct: 158 ELSFW--------ISAHLDQAASEQQSLLELTDTHERLSQQFEMLDHTRRQLAARTVLMD 209
Query: 283 LE 284
L+
Sbjct: 210 LK 211
>gi|428780441|ref|YP_007172227.1| peptidase S16, lon domain-containing protein [Dactylococcopsis
salina PCC 8305]
gi|428694720|gb|AFZ50870.1| peptidase S16, lon domain protein [Dactylococcopsis salina PCC
8305]
Length = 207
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 43/239 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P LH++E RY ++ L + F + DP+
Sbjct: 6 LPLFPLP-DVVLFPGRPLPLHIFEFRYRMMMNTILETDRRFGVLMFDPVK--------GE 56
Query: 105 AARCGCLVLIENVERL--DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
A GC I +RL D ++++ G R +++ + + P+ G V ++D T +
Sbjct: 57 IAPVGCCAEISQFQRLPDDRIKMLTL-GQQRFRVLNWVREKPYRVGLVEWIEDETPDT-- 113
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
D+ V EA++ V S + +++ L D +P L
Sbjct: 114 DLRPLAQDV------------------EALLNDVVKLSAKLTDQKIELPDD---VPDLPR 152
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF S L + E+ ++++DTK RL+ E + + + LAA+ A++
Sbjct: 153 ELSFW--------IASNLYGVASEQQSLLEMQDTKARLDREAEILGSTRNHLAARTALK 203
>gi|406959167|gb|EKD86587.1| hypothetical protein ACD_37C00226G0001, partial [uncultured
bacterium]
Length = 696
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
VVP++P + ++ P+ +L + LA LE + ++++ + + +++ +
Sbjct: 4 VVPIIPIR-DGIIFPNTDSVLTFGRPKSLAALEISFSQERIVCFVLQKSARVNDPSPSDI 62
Query: 104 FAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASP 161
+ R G L IE + + + +RG+ RVKI F + + FL G V + + T+ +P
Sbjct: 63 Y--RTGTLCRIERMIKAEGEINAQVRGISRVKINSFHENENFLIGHVEELPEDTTDTP 118
>gi|398830707|ref|ZP_10588888.1| peptidase S16, lon domain protein [Phyllobacterium sp. YR531]
gi|398213287|gb|EJM99880.1| peptidase S16, lon domain protein [Phyllobacterium sp. YR531]
Length = 220
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
VP+ P + +L+P L+++E RYLA++E AL K+ + ++ P + + E
Sbjct: 18 VPIFPLS-GALLLPGGQLPLNIFELRYLAMIEAALGSKR--IIGMIQP-RLDQEDEEGLE 73
Query: 105 AARCGCLVLIEN-VERLDIGALVSIRGVGRVKIVKFFQAD-PFLKGEVIPMQ-DTTSASP 161
+ GCL I + E D LV+++G+ R ++VK PF + ++ P++ D A
Sbjct: 74 LSEVGCLGRITSFAETGDGRILVTLQGICRFRVVKELATRAPFRQCKIAPLRADLDEADD 133
Query: 162 SDVS-SKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYV-----LNSLQWAEKQPSLD 211
S+V + +L V A NSLE + A +T V ++ AEKQ L+
Sbjct: 134 SEVDRAALLRVFRAYLDANSLEADWEGISRAGNETLVNALAMMSPFGAAEKQALLE 189
>gi|91070540|gb|ABE11446.1| ATP-dependent protease [uncultured Prochlorococcus marinus clone
HOT0M-5C8]
Length = 218
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 40/239 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P E LH++E+RY +L L +F DPI+ S
Sbjct: 9 LPLFPLP-EVVLFPQEVLPLHIFESRYRIMLRSVLQTDSMFGVIKWDPITKS-------- 59
Query: 105 AARCGCLVLIENVERLDIG--ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
A GC I + + G +V+I G R ++++ ++ P+ V + D S
Sbjct: 60 MANVGCCAQIIKHQTGEDGRSNIVTI-GQQRFQVLEIVRSTPYCSAMVSWITDENIESFQ 118
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
+ SV +A+Y + L KL ++ + N L+
Sbjct: 119 SLDLLKDSVTKALYDVVKLSSKLTNTQKVLPDKLPTNPLE-------------------- 158
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF + G E +L +E R+T RL E ++ + LAA+ A++
Sbjct: 159 -LSFWIGAHLGGPVSEEQQRLLEE-------RNTYTRLQREFEMLDHTRKQLAARTALK 209
>gi|428772541|ref|YP_007164329.1| peptidase S16 lon domain-containing protein [Cyanobacterium
stanieri PCC 7202]
gi|428686820|gb|AFZ46680.1| peptidase S16 lon domain protein [Cyanobacterium stanieri PCC 7202]
Length = 212
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 41/238 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P LH++E RY ++ L + F ++DP +
Sbjct: 11 LPLFPLP-EVVLFPGRPLPLHIFEFRYRMMMNTILEYDRRFGVLMIDPTN--------GE 61
Query: 105 AARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A+ GC I + ERL D + G R +++++ + P+ G V ++D +P +
Sbjct: 62 IAQIGCCAEIIHFERLPDDRMKILTLGQQRFRVLEYVREKPYRVGLVEWIED--EPTPDN 119
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+ K VK + + +L KL K + + +P+
Sbjct: 120 LQGKADEVKTLLTDVVNLSAKLTDQKIELPEN---------------------LPTTPTE 158
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ + G V ++Q+ L ++++DT +RL + + + LAA+ A++
Sbjct: 159 LSYWVASNLYG------VAVEQQAL--LEMQDTAERLQREADILTTTRGNLAARTALK 208
>gi|414583179|ref|ZP_11440319.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-1215]
gi|420878353|ref|ZP_15341720.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0304]
gi|420885432|ref|ZP_15348792.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0421]
gi|420901977|ref|ZP_15365308.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0817]
gi|420974126|ref|ZP_15437317.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0921]
gi|392081195|gb|EIU07021.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0421]
gi|392083262|gb|EIU09087.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0304]
gi|392099338|gb|EIU25132.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0817]
gi|392118331|gb|EIU44099.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-1215]
gi|392162009|gb|EIU87699.1| ATP-dependent protease La domain protein [Mycobacterium abscessus
5S-0921]
Length = 208
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + VL+P E L ++E RY+A++ + L F + I+ G
Sbjct: 5 FPLQSVLLPGEPLPLRIFEPRYVAMIRDVLAADHTFGVVL---IARGREVGGGDVRHDVG 61
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKV 168
+ + E L VS G R++I + + DP+ + EV P P + +V
Sbjct: 62 TAARVLDCESLGADRFAVSCEGAHRIRITSWLEDDPYPRAEVQPW-------PDEPDERV 114
Query: 169 LSVKEAVYSLNSLEIKLK 186
L + +LN ++++++
Sbjct: 115 LPLS----ALNEVQVRIE 128
>gi|118463030|ref|YP_883847.1| ATP-dependent protease La [Mycobacterium avium 104]
gi|118164317|gb|ABK65214.1| ATP-dependent protease La (LON) domain subfamily protein
[Mycobacterium avium 104]
Length = 213
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + L+P + L ++E RY AL+ L + F + I+ ARC
Sbjct: 10 FPLESALLPDQDLPLRIFEPRYGALVRHCLDTGEQFGVVL-----IARGREVGGGDARCD 64
Query: 110 CLVLIENVERLDIGA---LVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSA 159
VL V+ +D GA L++ R R+++ ++ DP+ + V+P D A
Sbjct: 65 VGVLSRIVDCVDQGAGRYLLNCRTGQRIRVSEWLPDDPYPRATVMPWPDEPGA 117
>gi|206601594|gb|EDZ38077.1| Putative Lon family ATP-dependent protease [Leptospirillum sp.
Group II '5-way CG']
Length = 218
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
L +PL P N VL P + LH++E RY AL+ EA +R V VL ++
Sbjct: 3 LTIPLFPLP-NVVLFPKTLRPLHIFEPRYRALVSEA-IRTDSLVGMVLLKEGWEAQYDQS 60
Query: 103 SFAARCGCLVLIENVERLDIGA-LVSIRGVGRVKIVKFFQADPFLKGEV 150
+ GCL I RL G +++ G+ + K + F +GEV
Sbjct: 61 PPIEKIGCLGRIIQSNRLSDGRYYITLLGLSTFSLEKELEHPVFRRGEV 109
>gi|410479413|ref|YP_006767050.1| Lon family ATP-dependent protease [Leptospirillum ferriphilum
ML-04]
gi|424867231|ref|ZP_18291039.1| Putative Lon family ATP-dependent protease [Leptospirillum sp.
Group II 'C75']
gi|124515291|gb|EAY56801.1| putative Lon family ATP-dependent protease [Leptospirillum rubarum]
gi|387222266|gb|EIJ76724.1| Putative Lon family ATP-dependent protease [Leptospirillum sp.
Group II 'C75']
gi|406774665|gb|AFS54090.1| putative Lon family ATP-dependent protease [Leptospirillum
ferriphilum ML-04]
Length = 218
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
L +PL P N VL P + LH++E RY AL+ EA +R V VL ++
Sbjct: 3 LTIPLFPLP-NVVLFPKTLRPLHIFEPRYRALVSEA-IRTDSLVGMVLLKEGWEAQYDQS 60
Query: 103 SFAARCGCLVLIENVERLDIGA-LVSIRGVGRVKIVKFFQADPFLKGEV 150
+ GCL I RL G +++ G+ + K + F +GEV
Sbjct: 61 PPIEKIGCLGRIIQSNRLSDGRYYITLLGLSTFSLEKELEHPVFRRGEV 109
>gi|254777159|ref|ZP_05218675.1| ATP-dependent protease La [Mycobacterium avium subsp. avium ATCC
25291]
Length = 213
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + L+P + L ++E RY AL+ L + F + I+ ARC
Sbjct: 10 FPLESALLPDQDLPLRIFEPRYGALVRHCLDTGEQFGVVL-----IARGREVGGGDARCD 64
Query: 110 CLVLIENVERLDIGA---LVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSA 159
VL V+ +D GA L++ R R+++ ++ DP+ + V+P D A
Sbjct: 65 VGVLSRIVDCVDQGAGRYLLNCRTGQRIRVSEWLPDDPYPRATVMPWPDEPGA 117
>gi|260435152|ref|ZP_05789122.1| ATP-dependent protease La [Synechococcus sp. WH 8109]
gi|260413026|gb|EEX06322.1| ATP-dependent protease La [Synechococcus sp. WH 8109]
Length = 211
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 41/242 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P + LH++E+RY LL+ L K F ++P E
Sbjct: 9 LPLFPLP-DVVLFPQQLLPLHIFESRYRMLLQTVLETDKRFGIVRINP--------ENGE 59
Query: 105 AARCGCLVLIENVERLDIGA--LVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
A GC + + + G +VS+ G R +++ + P+ G V ++D A
Sbjct: 60 MAEIGCCAEVLQHQTTEDGRSYIVSL-GQQRFRLLNITRETPYRTGMVSWLEDEPVADTD 118
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
++S V EA+ + L KL+ ++ L D +P L
Sbjct: 119 QLNSLRDKVSEALNDVVQLTSKLQ------------------NREVELPDD---LPDLPR 157
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQA 282
+SF + L + E+ ++L DT +RL+ E ++ + LAA+ +
Sbjct: 158 ELSFW--------ISAHLDQAASEQQCLLELTDTHERLSQQFEMLDHTRRQLAARTVLMD 209
Query: 283 LE 284
L+
Sbjct: 210 LK 211
>gi|213969327|ref|ZP_03397465.1| ATP-dependent protease La domain protein [Pseudomonas syringae pv.
tomato T1]
gi|301381922|ref|ZP_07230340.1| ATP-dependent protease La domain protein [Pseudomonas syringae pv.
tomato Max13]
gi|302061931|ref|ZP_07253472.1| ATP-dependent protease La domain protein [Pseudomonas syringae pv.
tomato K40]
gi|302130579|ref|ZP_07256569.1| ATP-dependent protease La domain protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|422660260|ref|ZP_16722675.1| ATP-dependent protease La domain protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|213926005|gb|EEB59562.1| ATP-dependent protease La domain protein [Pseudomonas syringae pv.
tomato T1]
gi|331018868|gb|EGH98924.1| ATP-dependent protease La domain protein [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 196
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
+ +PL P +N VL P L L+EARYL ++ + + + F + SE
Sbjct: 1 MTLPLFP--LNAVLFPGCVLDLQLFEARYLDMIGRCMKQGEGFGVVCI--TQGSEVGIVP 56
Query: 103 SFAARCGCLVLIENVERLDIGALVSIRGVG--RVKIVKF-FQADPFLKGEVIPMQDTTSA 159
+R GC L+E+ ++ D G L+ IR VG R +++ Q D L EV +Q+
Sbjct: 57 DGYSRIGCEALVEDFQQQDNG-LLGIRVVGGRRFRVIATEVQRDQLLVAEVEWLQEPEER 115
Query: 160 SPSDVSSKVLSVKEAV 175
+ + ++++ EA+
Sbjct: 116 PLQEEDADLVALLEAL 131
>gi|398837518|ref|ZP_10594811.1| peptidase S16, lon domain protein [Pseudomonas sp. GM102]
gi|398118810|gb|EJM08536.1| peptidase S16, lon domain protein [Pseudomonas sp. GM102]
Length = 196
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEAS 103
+PL P +N VL P L ++EARYL ++ + + F V +LD E
Sbjct: 3 LPLFP--LNTVLFPDCILDLQIFEARYLDMIGRCMKQGGGFGVVCILDG---EEVGIAPE 57
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKF-FQADPFLKGEVIPMQDTTSASP 161
AR GC LI + + D G L + ++G R +V+ Q D + +V ++D
Sbjct: 58 GYARVGCEALITDFHQQDNGLLGIRVKGGRRFHVVRTEVQRDQLIVADVEWLEDEPEQPL 117
Query: 162 SDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW 203
D + ++++ +A+ +E L EA Q + N L +
Sbjct: 118 QDEDADLVALLKALAEHPMVE-ALSMGTEATGQQSLANQLAY 158
>gi|28867965|ref|NP_790584.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. tomato str. DC3000]
gi|28851201|gb|AAO54279.1| ATP-dependent protease La domain protein [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 196
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
+ +PL P +N VL P L L+EARYL ++ + + + F + SE
Sbjct: 1 MTLPLFP--LNAVLFPGCVLDLQLFEARYLDMIGRCMKQGEGFGVVCI--TQGSEVGIVP 56
Query: 103 SFAARCGCLVLIENVERLDIGALVSIRGVG--RVKIVKF-FQADPFLKGEVIPMQDTTSA 159
+R GC L+E+ ++ D G L+ IR VG R +++ Q D L EV +Q+
Sbjct: 57 DGYSRIGCEALVEDFQQQDNG-LLGIRVVGGRRFRVIATEVQRDQLLVAEVEWLQEPEER 115
Query: 160 SPSDVSSKVLSVKEAV 175
+ + ++++ EA+
Sbjct: 116 PLQEEDADLVALLEAL 131
>gi|118374649|ref|XP_001020512.1| EF hand family protein [Tetrahymena thermophila]
gi|89302279|gb|EAS00267.1| EF hand family protein [Tetrahymena thermophila SB210]
Length = 946
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 39/58 (67%)
Query: 214 EAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSI 271
+ F+P + +++ +P+S S+QS+L +++ + M ++++K+R+ N+L F+E ++
Sbjct: 164 QTFVPGITQKIQSTQIKPLSVSSQSKLFSPVRDQTRPMSMQESKRRIINNLNFIENNL 221
>gi|354566516|ref|ZP_08985688.1| anti-sigma H sporulation factor, LonB [Fischerella sp. JSC-11]
gi|353545532|gb|EHC14983.1| anti-sigma H sporulation factor, LonB [Fischerella sp. JSC-11]
Length = 829
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
++P+LP IN V+VP + + + R + L++E + +L +++ EA
Sbjct: 25 ILPVLPL-INTVIVPMAVAPIVVGQERSVKLVDEVMRTNRLVAL-------VAQRHPEAR 76
Query: 104 FAA-----RCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTT 157
A R G +I + RL G L + ++G+ R++I+ F Q +PFL +
Sbjct: 77 PAGPDDIYRVGTAAIIHRLLRLPDGTLQLVVQGLKRIRILDFLQTEPFLVARI------- 129
Query: 158 SASPSDVSSKVLSVKEAVYSLNSLEIKL 185
SP V S V ++ +L L KL
Sbjct: 130 ETSPEQVISGVTELEALRRTLGELFSKL 157
>gi|408830021|ref|ZP_11214911.1| hypothetical protein SsomD4_22690 [Streptomyces somaliensis DSM
40738]
Length = 246
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 55/136 (40%), Gaps = 28/136 (20%)
Query: 41 TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEAL----VRKKLFVYFVL------ 90
T+ +PL P +N VL P L+++E RY A++ E L + + F +
Sbjct: 2 TTARLPLFP--LNSVLFPGLVLPLNVFEERYRAMMRELLKTDESQPRRFAVVAIRDGHEV 59
Query: 91 --------DPISISEYATEASFAA-------RCGCLVLIENV-ERLDIGALVSIRGVGRV 134
DP ++ E A F R GC+ + ER D G V G RV
Sbjct: 60 ARTAPGLPDPTALPERGPAAGFGPDPAAALYRVGCVADAATIRERPDGGFEVLATGTKRV 119
Query: 135 KIVKFFQADPFLKGEV 150
+I+ PFL EV
Sbjct: 120 RILSVDAGGPFLTAEV 135
>gi|398901815|ref|ZP_10650606.1| peptidase S16, lon domain protein [Pseudomonas sp. GM50]
gi|398179426|gb|EJM67038.1| peptidase S16, lon domain protein [Pseudomonas sp. GM50]
Length = 196
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEAS 103
+PL P +N VL P L ++EARYL ++ + + F V +LD E
Sbjct: 3 LPLFP--LNTVLFPDCILDLQIFEARYLDMIGRCMKQGGGFGVVCILDG---EEVGIAPE 57
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKF-FQADPFLKGEVIPMQDTTSASP 161
AR GC LI + + D G L + ++G R +V+ Q D + +V ++D
Sbjct: 58 GYARVGCEALITDFHQQDNGLLGIRVKGGRRFHVVRTEVQRDQLIVADVEWLEDEPEQPL 117
Query: 162 SDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW 203
D + ++++ A+ +E L EA Q + N L +
Sbjct: 118 QDEDADLVALLRALAEHPMVE-ALSMGTEATGQQSLANQLAY 158
>gi|427417866|ref|ZP_18908049.1| peptidase S16, lon domain protein [Leptolyngbya sp. PCC 7375]
gi|425760579|gb|EKV01432.1| peptidase S16, lon domain protein [Leptolyngbya sp. PCC 7375]
Length = 218
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 39 NATSLVVPLLP-FNINE-VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISIS 96
+A+S+ V LP F + E VL P LH++E RY ++ L + F ++DP
Sbjct: 3 SASSVAVRELPLFPLPELVLFPGRHLPLHIFEFRYRIMMNTILQSDRRFGVLMIDP---- 58
Query: 97 EYATEASFAARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQD 155
++ ++ GC + + +RL D + G R +++ + + P+ G V ++D
Sbjct: 59 ----DSGEISKIGCCAEVIHFQRLPDDRMKILTMGHQRFRVLDYVREKPYRVGLVEWVED 114
Query: 156 TTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEA 215
A+ D+S V + + + L KL + +++ E P L D
Sbjct: 115 --EAADKDLSPLASEVDQLLRDVVHLSSKLTS-----------QEIEFPESVPELPLD-- 159
Query: 216 FIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLA 275
+S S L + +E+ + +++++T QRL + + + + LA
Sbjct: 160 ----------------LSYWIASTLHGVAREQQQLLEMQNTAQRLEREADILTSTRNHLA 203
Query: 276 AKLAIQ 281
A+ A++
Sbjct: 204 ARTALK 209
>gi|298490078|ref|YP_003720255.1| peptidase S16 lon domain-containing protein ['Nostoc azollae' 0708]
gi|298231996|gb|ADI63132.1| peptidase S16 lon domain protein ['Nostoc azollae' 0708]
Length = 216
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 43/235 (18%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL PS LH++E RY ++ L + F ++DP+
Sbjct: 12 LPLFPL-AEVVLFPSRPLPLHIFEFRYRIMMNTILAADRRFGVLMIDPVK--------GT 62
Query: 105 AARCGCLVLIENVERL--DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
A+ GC I + +R+ D ++++ G R +++++ + P+ G V ++D +
Sbjct: 63 IAKVGCCAEIIHYQRMPDDRMEMLTL-GQQRFRVLEYVREKPYRVGLVQWIEDQPPS--K 119
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
D+ V++ + + L +KL EK L D +P L
Sbjct: 120 DLRPLATEVEQLLRDVIRLSVKL------------------TEKNVELPED---LPDLPT 158
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAK 277
+S+ S L + E+ ++L+DT RL E + + + LAA+
Sbjct: 159 ELSYWV--------ASNLYGVAPEQQALLELQDTYARLQREAEILTSTRNHLAAR 205
>gi|56750667|ref|YP_171368.1| ATP-dependent Lon protease [Synechococcus elongatus PCC 6301]
gi|81299691|ref|YP_399899.1| peptidase S16, lon-like protein [Synechococcus elongatus PCC 7942]
gi|56685626|dbj|BAD78848.1| ATP-dependent Lon protease [Synechococcus elongatus PCC 6301]
gi|81168572|gb|ABB56912.1| Peptidase S16, lon-like [Synechococcus elongatus PCC 7942]
Length = 218
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 43/239 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P LH++E RY L++ L + F + DP EA+
Sbjct: 11 LPLFPLP-EVVLFPGRLLPLHIFEYRYRILIQTILESDRRFGVLLWDPAK-----DEAAT 64
Query: 105 AARCGCLVLIENV--ERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
C L+ + + +R+++ L G R +++ + + PF G V ++D P+
Sbjct: 65 IGCCAELIRHQRLPDDRMNVWTL----GQQRFRVLDYVREKPFRVGLVEWIED----EPT 116
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
D K L+ + +N+ V+Q V S + + ++ L D +P L
Sbjct: 117 DEDLKPLATE-----VNT-----------VLQDVVQLSGKLSGQEIELPDD---LPDLPR 157
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ V+G L + +E+ +++ +T+ RL+ LE + + S LAA+ ++
Sbjct: 158 ELSYW----VAG----HLYGVYEEQQSLLEMLNTRDRLDRELEILGSTRSHLAARTVLK 208
>gi|309792561|ref|ZP_07687023.1| peptidase S16 lon domain protein [Oscillochloris trichoides DG-6]
gi|308225375|gb|EFO79141.1| peptidase S16 lon domain protein [Oscillochloris trichoides DG6]
Length = 212
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P + LH++E RY ++ + +V F L S E + F
Sbjct: 5 LPLFP--LGTVLFPGSTINLHIFEERYRTMINQCIVEDVPFGVVYLR--SGDEVTEDRPF 60
Query: 105 A-----ARCGCLVLIENVERLDIGA-LVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTS 158
A A G + I RL+ G L++ G+ R I Q P++ G V+P+ + +
Sbjct: 61 ARPAETASIGTMTQINAHVRLEDGRFLINAIGMQRFHIQYIIQRSPYMVGMVMPLSEESG 120
Query: 159 ASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKE 190
+ + ++ +V + +++ + AP E
Sbjct: 121 SQVESAAKELRAVYRRYW--HAVSVASGAPVE 150
>gi|262200955|ref|YP_003272163.1| peptidase S16 lon domain-containing protein [Gordonia bronchialis
DSM 43247]
gi|262084302|gb|ACY20270.1| peptidase S16 lon domain protein [Gordonia bronchialis DSM 43247]
Length = 206
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + L+P E L ++E RY A+L + L F + I+ G
Sbjct: 2 FPLGTALLPGEPLPLRIFEPRYRAMLGDCLDGPDADARFGVVLIARGSEVGGGDVRHDVG 61
Query: 110 CLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDT--TSASPSDVSS 166
I+ V+RL G A V G R ++V++ DP+ + V + D T A+ + +
Sbjct: 62 TFAAIDAVDRLPDGRATVVCSGTARFRVVEWLPDDPYPRARVQTLADLEFTDAAHTRLRD 121
Query: 167 KVLSVKEAV 175
+ ++E V
Sbjct: 122 QGARIRELV 130
>gi|428770167|ref|YP_007161957.1| peptidase S16 lon domain-containing protein [Cyanobacterium
aponinum PCC 10605]
gi|428684446|gb|AFZ53913.1| peptidase S16 lon domain protein [Cyanobacterium aponinum PCC
10605]
Length = 212
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 20/180 (11%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P LH++E RY ++ L + F ++DPIS
Sbjct: 11 LPLFPLP-EVVLFPGRPLPLHIFEFRYRMMMNTILEYDRRFGVLMIDPIS--------GE 61
Query: 105 AARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKG-----EVIPMQDTTS 158
A+ GC I + ERL D V G R +++++ + P+ G E +P Q+
Sbjct: 62 IAKVGCCAEIIHFERLPDDRMKVLTLGQQRFRLLEYVRQKPYRVGLVEWFEDLPPQENLQ 121
Query: 159 ASPSDVSSKVLSVKEAVYSLNSLEIKL--KAPKEAVMQTYVLNSLQWA---EKQPSLDCD 213
+V++ + V + L +I+L P + + +Y + S + E+Q L+ D
Sbjct: 122 PKAEEVTTLLHDVVKLSAKLTDQKIELPENLPTQPIELSYWVASNLYGVASEQQALLEID 181
>gi|398858315|ref|ZP_10614007.1| peptidase S16, lon domain protein [Pseudomonas sp. GM79]
gi|398239627|gb|EJN25334.1| peptidase S16, lon domain protein [Pseudomonas sp. GM79]
Length = 196
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEAS 103
+PL P +N VL P L ++EARYL ++ + + F V +LD E
Sbjct: 3 LPLFP--LNTVLFPDCILDLQIFEARYLDMIGRCMKQGGGFGVVCILDG---EEVGIAPE 57
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKF-FQADPFLKGEVIPMQDTTSASP 161
AR GC LI + + D G L + ++G R +V+ Q D + EV ++D
Sbjct: 58 GYARVGCEALITDFHQQDNGLLGIRVKGGRRFHVVRTEVQRDQLIVAEVEWLKDEPEQPL 117
Query: 162 SDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW 203
+ + ++++ +A+ +E L EA Q + N L +
Sbjct: 118 QEEDADLVALLKALAEHPMVE-ALNMGTEATGQQSLANQLAY 158
>gi|407451613|ref|YP_006723337.1| ATP-dependent Lon protease [Riemerella anatipestifer RA-CH-1]
gi|403312597|gb|AFR35438.1| ATP-dependent Lon protease, bacterial type [Riemerella
anatipestifer RA-CH-1]
Length = 796
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 107 RCGCLVLIENVERLDIGALVSI-RGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVS 165
+ G I + +L G + +I RGVGR K+ K + +PFLK E+ + +T++ S +
Sbjct: 95 KVGTTAKILKIIKLPDGNITAIMRGVGRFKLNKLVEKEPFLKAEIEKLNETSTKSKEEYE 154
Query: 166 SKVLSVKE 173
+ + ++KE
Sbjct: 155 ALIENIKE 162
>gi|441507043|ref|ZP_20988970.1| hypothetical protein GOACH_02_00070 [Gordonia aichiensis NBRC
108223]
gi|441448803|dbj|GAC46931.1| hypothetical protein GOACH_02_00070 [Gordonia aichiensis NBRC
108223]
Length = 203
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 19/183 (10%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F + L+P E L ++E RY A+L++ L F + I+ G
Sbjct: 2 FPLGTALLPGEVLPLRIFEPRYRAMLDDCLATADGPPRFGVVLIARGSEVGGGDVRHDVG 61
Query: 110 CLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKV 168
IE V R +G + V G R ++ ++ DP+ + EV + + ++ S S
Sbjct: 62 TFAAIERVSRDPVGLSFVHCVGTRRFRVTEWLPDDPYPRAEVALLDEPKISTTSRADSLA 121
Query: 169 LSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDC---DEAFIPSLAERVS 225
L + +E V+ Y + PS D D+A + A R+
Sbjct: 122 LGARI---------------REIVVDAYARRGEHLPDDLPSFDAADLDDAGLFGWAARLP 166
Query: 226 FAA 228
A
Sbjct: 167 IGA 169
>gi|295696504|ref|YP_003589742.1| peptidase S16 lon domain-containing protein [Kyrpidia tusciae DSM
2912]
gi|295412106|gb|ADG06598.1| peptidase S16 lon domain protein [Kyrpidia tusciae DSM 2912]
Length = 208
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P ++ VL P ++ LH++E RY ++E L+++ V F + I + + +
Sbjct: 6 LPLFP--LHTVLFPRQTLALHVFERRYRTMIEWCLMQR---VPFGVTLIQSGDEVGDEAV 60
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQD 155
R G I+ V + G + V + G R +++ P L V P+ D
Sbjct: 61 PHRVGTTAWIQEVTQFADGRMSVKVTGRQRFRVLYSAYDGPCLTARVQPLYD 112
>gi|317968690|ref|ZP_07970080.1| Lon protease domain-containing protein [Synechococcus sp. CB0205]
Length = 223
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P E LH++E RY +L L + F DP E +
Sbjct: 9 LPLFPLP-DVVLFPQEVLPLHIFEPRYRMMLRTVLESDRRFGVVRWDP-------QEGTM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
A+ C +++ + D + + G R ++++ + PF G V ++D S +
Sbjct: 61 ASVGCCAEILQCQTQDDDRSYIVTMGQQRFRLLEVVREAPFKVGLVSWIEDEQPEDHSGL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
V A+ + L KL K SL D +P L +
Sbjct: 121 QELSGEVSSALKDVVELTGKLMG------------------KPTSLPSD---LPDLPREL 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQA 282
S+ + G V QQ+ L +++ +T++RL E ++ + LAA+ +++
Sbjct: 160 SYWIGSHLGGP-----VADQQQAL--LEITNTEERLRQEFELLDETRRQLAARTVLES 210
>gi|383643190|ref|ZP_09955596.1| hypothetical protein SchaN1_16400 [Streptomyces chartreusis NRRL
12338]
Length = 246
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 41 TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALV----RKKLFVYFVL------ 90
T++ +PL P +N VL P L+++E RY A++ E L + F +
Sbjct: 2 TTVRLPLFP--LNSVLFPGLVLPLNVFEERYRAMMRELLKTPEDEPRRFAVVAIRDGHEV 59
Query: 91 --------DPISISEYATEASFAA-------RCGCLVLIENV-ERLDIGALVSIRGVGRV 134
DP S+ E A F + GC+ + ER D V G RV
Sbjct: 60 APSAPGMPDPTSLPERGPAAGFGTDPAKAFHKVGCIADAATIRERTDGSFEVLATGTTRV 119
Query: 135 KIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKVL 169
+++ ++ PFL E+ P+ + + ++ VL
Sbjct: 120 RLLSVEESGPFLTAELEPLPEEPGDEAAPLAEGVL 154
>gi|282898984|ref|ZP_06306966.1| Peptidase S16, lon [Cylindrospermopsis raciborskii CS-505]
gi|281196124|gb|EFA71039.1| Peptidase S16, lon [Cylindrospermopsis raciborskii CS-505]
Length = 216
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 43/235 (18%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P+ LH++E RY ++ L + F +++PI+
Sbjct: 12 LPLFPLP-EVVLFPTRPLPLHVFEFRYRIMMNTILESDRRFGVLMVNPIN--------GA 62
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC I + +RL+ G + + G R +++++ + P+ G V M++ A
Sbjct: 63 IANVGCCAEIIHYQRLEDGRMEILTLGQQRFRVLEYVREKPYRVGLVEWMEENPPA---- 118
Query: 164 VSSKVLSVKEAVYSLNSLEIK-LKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
L+++ L E +++ V S + ++ L D +P L
Sbjct: 119 -----------------LDLRPLAREVEQLLRDVVRLSSKLTDRDIELPED---LPDLPR 158
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAK 277
+S+ S L + E+ ++L+DT+ RLN E + + + LAA+
Sbjct: 159 ELSYW--------IASNLYGVADEQQALLELQDTQARLNRESEILTSTRNHLAAR 205
>gi|222625211|gb|EEE59343.1| hypothetical protein OsJ_11426 [Oryza sativa Japonica Group]
Length = 640
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 91/229 (39%), Gaps = 38/229 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
V L+P + +V++P + L+++E RY +VR+ + + + I +
Sbjct: 434 VDLMPLFVMDVVLPCQKMALNIFEPRY-----RLMVRRIMEGNHRMGMVGID---SATGT 485
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A CGC V I E L G + + G R +I++ + D + E+ +QD + S
Sbjct: 486 VADCGCEVEILECEPLPDGRFYLEVEGSRRFRILRSWDQDGYRVAEIEWLQDISLPDGSQ 545
Query: 164 VSSKVLSVKEAVYSLNSLEIK----LKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPS 219
++ A L I+ + P QT + E P P
Sbjct: 546 ERKDLMERANAASELARTYIRRAREISRPARRARQTDL-------ESMPG--------PQ 590
Query: 220 LAERVSFAAFQPVSGSTQSELVKLQ-QEKLKAMDLRDTKQRLNNSLEFV 267
E+ SF L+ L+ ++L + L DT++R++ SL +
Sbjct: 591 DPEKFSFWLVN---------LINLRPSDRLDLLRLSDTRERISRSLRLL 630
>gi|72161553|ref|YP_289210.1| peptidase S16, lon N-terminal, partial [Thermobifida fusca YX]
gi|71915285|gb|AAZ55187.1| peptidase S16, lon N-terminal [Thermobifida fusca YX]
Length = 225
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 42 SLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALV-----RKKLFVYFVLDPISIS 96
S +PL P + VL P + LH++E RYL L+ + L ++ V + +
Sbjct: 2 STTLPLFP--LGSVLFPGMTMALHVFEDRYLTLVNDLLSLPADQPRRFGVVGITLGHEVG 59
Query: 97 EYATEASFAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQAD---PFLKGEVIP 152
E A A A GC I V+R ++ + + GV R + V++ D P+L+ + +P
Sbjct: 60 EKA--AHQWADVGCTAEISTVQRRPNSSVDLVVTGVERFRAVEWLAPDGTTPYLRAQTVP 117
Query: 153 MQDTTSASPSDVSSKVLSVKEAVY--SLNSLEI----KLKAPKEAVMQTYVLNS---LQW 203
+ + + + AVY L+ + I PK+ V +Y L L
Sbjct: 118 LAEEVGEEAEVWRERA-AHHFAVYLERLDRIGIIVADDTDLPKDPVAASYALADAIVLDM 176
Query: 204 AEKQPSLDCDEAFIPSLAERVSFA 227
+KQ L+ D A AER++ A
Sbjct: 177 PDKQALLEADSA-----AERLARA 195
>gi|148243271|ref|YP_001228428.1| Lon protease domain-containing protein [Synechococcus sp. RCC307]
gi|147851581|emb|CAK29075.1| Uncharacterized protein, similar to the N-terminal domain of Lon
protease [Synechococcus sp. RCC307]
Length = 215
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 40/238 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P E LH++E RY +L L + F DP E+
Sbjct: 9 LPLFPLP-DVVLFPQEVLPLHIFEHRYRMMLRTVLDSDRRFGVVRWDP--------ESKQ 59
Query: 105 AARCGCLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A+ GC + E D + + G R ++++ + PF+ G V M+D D
Sbjct: 60 MAQIGCCAEVLKCETGDDDRSNIVTMGQQRFRVLEIVREAPFMVGLVSWMEDEPPV--DD 117
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+ V+ A+ + L KL K T + + L P L
Sbjct: 118 IQPLASDVQVALKDVVDLSAKLLGHK-----TVLPDDL----------------PDLPRE 156
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF V G + QQ+ L+ L T +RL E ++ + LAA+ ++
Sbjct: 157 LSFW----VGGHLGGAVADHQQQLLE---LTSTGERLQLEFELLDHTRRQLAARTVLK 207
>gi|406928783|gb|EKD64512.1| hypothetical protein ACD_50C00361G0002 [uncultured bacterium]
Length = 792
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVL-------DPISISE 97
+PL+P + V+ P+ +L + LA LE + +++ V FVL DP
Sbjct: 5 IPLIPIR-DGVIFPNTDSVLTFGRPKSLAALESSFSSERV-VCFVLQKNPKLNDPSPADL 62
Query: 98 YATEASFAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTT 157
Y G L IE + + D +RG+ RVKI+ + D FL V+ M DT
Sbjct: 63 Y--------EVGTLSRIERMVKTDGEINAQVRGIERVKILSVEELDSFLLARVVEMPDTG 114
Query: 158 SAS 160
+S
Sbjct: 115 ESS 117
>gi|387813249|ref|YP_005428731.1| hypothetical protein MARHY0825 [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381338261|emb|CCG94308.1| conserved hypothetical protein, ATP-dependent protease La domain
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 193
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
VPL P +N +++P L L+E RY+ +L L + FV +L +E ASF
Sbjct: 3 VPLFP--LNSIILPGGRIPLQLFEPRYIDMLTRCLKEDRGFVVVLLR--EGAETEARASF 58
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLK-GEV 150
G V I + ++LD G L +++ G +V +V+ +Q + L G+V
Sbjct: 59 YD-MGTYVRIIDFQQLDNGLLGITVEGDCKVSVVRSWQQEDGLNVGDV 105
>gi|412985783|emb|CCO16983.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 41 TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFV 89
++ V+P L F + E L+P + K+LHLYE R+++LL +++ + FV
Sbjct: 94 STHVLPSLLFPVAEPLIPGQRKVLHLYEPRFVSLLNDSVETHGGLLAFV 142
>gi|347755907|ref|YP_004863471.1| hypothetical protein [Candidatus Chloracidobacterium thermophilum
B]
gi|347588425|gb|AEP12955.1| Uncharacterized protein, N-terminal domain of Lon protease like
protein [Candidatus Chloracidobacterium thermophilum B]
Length = 232
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEAS 103
+P+ P + L P LH++E RY A++ + L +K+F V FV
Sbjct: 14 IPIFPLPV--ALFPGMMLPLHIFEERYKAMVRDCLAGEKIFGVTFV---------RGREG 62
Query: 104 F---AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQD 155
F R GC I + L+ G + + G+ R +++FQ +P+L+G V D
Sbjct: 63 FPPPVGRVGCAAFILAMVPLEEGRMNILTTGLARYHALEYFQDEPYLEGLVTFFDD 118
>gi|406959747|gb|EKD87015.1| hypothetical protein ACD_37C00074G0001, partial [uncultured
bacterium]
Length = 678
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
+VP++P + ++ P+ +L + L LE++ ++++ + + +++ A
Sbjct: 4 IVPIIPIR-DGIIFPNTDSVLTFGRPKSLLALEQSFSKERIVCFVLQKNSKLNDPAPSDL 62
Query: 104 FAARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASP 161
+ G L IE + + D ++G+ RVKI F + FL G V +QD +P
Sbjct: 63 YT--VGTLCRIERMIKSDGEINAHVKGLARVKITSFENRNSFLLGSVKELQDEVVDTP 118
>gi|449018179|dbj|BAM81581.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 437
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 35 ALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVY---FVLD 91
A+ VN +PL F ++E + P + LH++E RY +L + + F + F
Sbjct: 143 AVTVNQRIRWLPL--FLLDEAVFPYQRIQLHIFEPRYRLMLRRVMASSRQFGFVAVFRQP 200
Query: 92 P--ISISEYATEASFAARCGCLVLIENVERLDIG-ALVSIRGVGRVKIV 137
P +++ A F A G ++ + + ERL G +L+ + G+ R +I+
Sbjct: 201 PAGLNVIRAAGGHPFMATVGTVLQVTDCERLGDGRSLIDVIGINRFRII 249
>gi|428298227|ref|YP_007136533.1| peptidase S16 lon domain-containing protein [Calothrix sp. PCC
6303]
gi|428234771|gb|AFZ00561.1| peptidase S16 lon domain protein [Calothrix sp. PCC 6303]
Length = 216
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P+ + LH++E RY ++ L + F ++DP
Sbjct: 12 LPLFPLP-DLVLFPTRPQALHVFEFRYRIMMNTILESDRRFGILMIDP--------NTGT 62
Query: 105 AARCGCLVLIENVERL--DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
A GC I + +RL D ++++ G R +++++ + P+ G V ++D T P+
Sbjct: 63 VANVGCCAEIIHYQRLPDDRMKMLTL-GQQRFRVLEYVREKPYRVGLVEWIEDET---PT 118
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
D L L ++ E +++ V S + E+ L D +P L
Sbjct: 119 D-------------DLRPLASEV----EQLLRDVVRLSGKLTEQNIELPED---LPDLPT 158
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ + G V +Q+ L ++L+DT RL E + + + LAA+ ++
Sbjct: 159 ELSYWVASNLHG------VAPEQQAL--LELQDTAARLEREAEILTSTRNHLAARTVLK 209
>gi|392412450|ref|YP_006449057.1| ATP-dependent protease La [Desulfomonile tiedjei DSM 6799]
gi|390625586|gb|AFM26793.1| ATP-dependent protease La [Desulfomonile tiedjei DSM 6799]
Length = 815
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 32 LRSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLD 91
+ SA V +VP+LP + V+ P+ L L +R + L E L F
Sbjct: 1 MNSAKLVGNFPSIVPILPLR-DMVVFPNVMVPLFLKGSRVVKLAESVAGVDNLVGLFYQK 59
Query: 92 PISISEYATEASFAARCGCLVLIENVERLDIGALVSI-RGVGRVKIVKFFQADPFLKGEV 150
S A+E + G L I+ V RLD G + +I GV R+++V+ Q++P+L GEV
Sbjct: 60 TRSRLGLASEE--ISLVGTLARIQQVVRLDNGGIKAIADGVCRIRLVRQTQSEPYLMGEV 117
Query: 151 IPMQDTT 157
+++ +
Sbjct: 118 TRLEEVS 124
>gi|33864051|ref|NP_895611.1| ATP-dependent protease La [Prochlorococcus marinus str. MIT 9313]
gi|124024058|ref|YP_001018365.1| ATP-dependent protease La [Prochlorococcus marinus str. MIT 9303]
gi|33635635|emb|CAE21959.1| ATP-dependent protease La (LON) domain [Prochlorococcus marinus
str. MIT 9313]
gi|123964344|gb|ABM79100.1| ATP-dependent protease La (LON) domain [Prochlorococcus marinus
str. MIT 9303]
Length = 220
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 38/238 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P E LH++E+RY +L+ L + F DP +
Sbjct: 9 LPLFPLP-DVVLFPQEVLPLHIFESRYRMMLQSVLESDRRFGVLRWDP--------QTKT 59
Query: 105 AARCGCLV-LIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC ++++ D + + G R +++ + PF V ++D + S
Sbjct: 60 MANVGCCAEILQHQTSKDGRSNIVTLGQQRFRVLDVIRDAPFRTAMVSWIEDDQMDNHSQ 119
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+ +SV +A++ + L KL + ++ D +P L
Sbjct: 120 LEELSISVAKALHDVVMLTGKL------------------TDSDITMPDD---LPDLPRE 158
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF + G + +E+ ++L T RL E ++ + LAA+ A++
Sbjct: 159 LSFWIGAHLGGP-------VAEEQQALLELTRTSHRLQREYEMLDHTRRQLAARTALK 209
>gi|296445769|ref|ZP_06887722.1| peptidase S16 lon domain protein [Methylosinus trichosporium OB3b]
gi|296256749|gb|EFH03823.1| peptidase S16 lon domain protein [Methylosinus trichosporium OB3b]
Length = 222
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 33 RSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDP 92
R N V+P+ P +L+P L+++E RYLA++++A+ ++ V ++ P
Sbjct: 5 RPYKDANGLPEVLPVFPLT-RALLLPRGELPLNIFEPRYLAMIDDAIASQR--VIGMIQP 61
Query: 93 ISISEYATEASFAARCGCLVLIEN-VERLDIGALVSIRGVGRVKIVK 138
+S + A R GC I +E D ++S+ G+ R I++
Sbjct: 62 LSGEDEREAAPALHRTGCAGRITRFLETGDGRYMISLTGIARFDIME 108
>gi|196233361|ref|ZP_03132205.1| peptidase S16 lon domain protein [Chthoniobacter flavus Ellin428]
gi|196222501|gb|EDY17027.1| peptidase S16 lon domain protein [Chthoniobacter flavus Ellin428]
Length = 189
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 56 LVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLIE 115
L P L+++E RY +L +L ++F + P ISE F G +
Sbjct: 8 LYPHVPLPLYIFEPRYRQMLAWSLEADRMFCIASMKP-GISEARATDDFYHVVGLGFVRA 66
Query: 116 NVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKVLSVK 172
V R D + + ++G+ R++IV F Q PF E +++ TS P+ + +L ++
Sbjct: 67 CVGRDDGTSHLILQGLARMRIVGFLQDKPFRIAE---LRELTSTPPAAEENDLLRIQ 120
>gi|344173554|emb|CCA88721.1| putative peptidase, S16 family [Ralstonia syzygii R24]
Length = 216
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 5/157 (3%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCG 109
F ++ VL P L ++EARY+ ++ L + F +++ + + G
Sbjct: 23 FPLHTVLFPGGLLPLRIFEARYIDMVRTCLRDQTPFGVCLIERGNEVATPDTPTVPVDIG 82
Query: 110 CLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPM-QDTTSASPSDVSSK 167
C+ I + +G L + +RG R K+ F A L+G V P+ D
Sbjct: 83 CIAHIVECDMEQLGLLMIKVRGTQRFKVRSFDTAGSLLRGTVEPIGTDVEDCKGELFDDC 142
Query: 168 VLSVKEAVYSLNSLE---IKLKAPKEAVMQTYVLNSL 201
V +++ V +L + E + L P + ++V N L
Sbjct: 143 VNALRRIVTTLGAREEGQVPLAEPYDWASPSWVGNRL 179
>gi|124004531|ref|ZP_01689376.1| ATP-dependent Lon protease, putative [Microscilla marina ATCC
23134]
gi|123990103|gb|EAY29617.1| ATP-dependent Lon protease, putative [Microscilla marina ATCC
23134]
Length = 212
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+P P N+ V+ P E+ LH++E RY L+ + + + F I + E
Sbjct: 6 LPFFPLNL--VVYPDENLNLHVFEPRYKQLIHDCIEQNTNF--------GIPSFINEE-- 53
Query: 105 AARCGCLVLIENVER-LDIGAL-VSIRGVGRVKIVKFFQA--DPFLKG---EVIPMQDTT 157
A G V I NVE+ D G + + +GV K++ F Q + G EVIP ++
Sbjct: 54 VAAYGTEVKIVNVEKTYDDGKMDIKTKGVQVFKVLSFDQKTQEKLYAGGTVEVIPHEE-- 111
Query: 158 SASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEK 206
+P +VS +++S + +Y + +K +Q++ + S Q A K
Sbjct: 112 -VAPEEVSRELISNLKKLYEI------IKVGAAINIQSFKVLSYQLAHK 153
>gi|424886814|ref|ZP_18310422.1| peptidase S16, lon domain protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393176165|gb|EJC76207.1| peptidase S16, lon domain protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 233
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
+L+P+ L+++E RYLA+L+ AL +L V V + E A GCL I
Sbjct: 37 LLLPAGQLPLNIFEPRYLAMLDAALTGNRL-VGMVQPALGEHEDKGGDPHLAAVGCLGRI 95
Query: 115 EN-VERLDIGALVSIRGVGRVKIV-KFFQADPFLKGEVIP-MQDTTSASPSDVSSK--VL 169
+ E D +VS+ GV R +++ + +DPF + P + D ++A+ + + +L
Sbjct: 96 TSFAETGDGRYIVSLTGVCRFRLLEEKATSDPFRTFRIAPFIADLSAANEEEAVDRAALL 155
Query: 170 SVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW------AEKQPSLDC 212
+ +A N LE ++ + A T V NSL AEKQ L+
Sbjct: 156 TAFKAYLDANKLEADWESVERASNLTLV-NSLAMMSPFGPAEKQALLEA 203
>gi|383784010|ref|YP_005468578.1| Lon family ATPdependent protease [Leptospirillum ferrooxidans C2-3]
gi|383082921|dbj|BAM06448.1| putative Lon family ATPdependent protease [Leptospirillum
ferrooxidans C2-3]
Length = 218
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 42 SLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATE 101
++ VPL P N VL P + LH++E RY A++ EA+ + L L ++Y
Sbjct: 2 NMTVPLFPLP-NVVLFPKTLRPLHIFEPRYRAMIAEAISGEGLIGMMFLKDGWENQYDQN 60
Query: 102 ASFAARCGCLV-LIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEV 150
+ GCL +I++ + D +++ G+ +++ ++PF G +
Sbjct: 61 PPMES-IGCLGRIIQHNQLPDGRYYITLLGISSFELISEIPSEPFRTGMI 109
>gi|218193137|gb|EEC75564.1| hypothetical protein OsI_12235 [Oryza sativa Indica Group]
Length = 640
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 91/229 (39%), Gaps = 38/229 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
V L+P + +V++P + L+++E RY +VR+ + + + I +
Sbjct: 434 VDLMPLFVMDVVLPCQKMALNIFEPRY-----RLMVRRIMEGNHRMGMVGID---SATGT 485
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A CGC V I E L G + + G R +I++ + D + E+ +QD + S
Sbjct: 486 VADCGCEVEILECEPLPDGRFYLEVEGSRRFRILRSWDQDGYRVAEIEWLQDISLPDGSQ 545
Query: 164 VSSKVLSVKEAVYSLNSLEIK----LKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPS 219
++ A L I+ + P QT + E P P
Sbjct: 546 ERKDLMERANAASELARTYIRRAREISRPVRRARQTDL-------ESMPG--------PQ 590
Query: 220 LAERVSFAAFQPVSGSTQSELVKLQ-QEKLKAMDLRDTKQRLNNSLEFV 267
E+ SF L+ L+ ++L + L DT++R++ SL +
Sbjct: 591 DPEKFSFWLVN---------LINLRPSDRLDLLRLSDTRERISRSLRLL 630
>gi|85711627|ref|ZP_01042684.1| hypothetical protein OS145_00460 [Idiomarina baltica OS145]
gi|85694487|gb|EAQ32428.1| hypothetical protein OS145_00460 [Idiomarina baltica OS145]
Length = 192
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + ++P+ L ++E RY L+++ + + FV + DP I +Y +A +
Sbjct: 7 LPLFPLTAH--VMPNGKLKLRIFEQRYTRLVKQCMANQSEFVVCMFDP-GIDKY--DADY 61
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKF-FQADPFLKGEV--IPMQDTTSAS 160
G V I + E L+ G L ++++G RV I F+ D G+V +P+
Sbjct: 62 ILPFGTAVTIVDFEMLNDGFLGITVQGERRVHIKHHEFEEDGLRIGDVEALPL-----WQ 116
Query: 161 PSDVSSKVLSVKE 173
P+ ++ +V +KE
Sbjct: 117 PTPITDEVAVLKE 129
>gi|386022443|ref|YP_005940468.1| ATP-dependent protease La [Pseudomonas stutzeri DSM 4166]
gi|327482416|gb|AEA85726.1| ATP-dependent protease La [Pseudomonas stutzeri DSM 4166]
Length = 194
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEAS 103
+PL P ++ VL P L ++EARYL ++ + L F V +LD + A AS
Sbjct: 3 LPLFP--LDTVLFPGCMLDLQIFEARYLDMVSQCLKAGHGFGVVHILDGSEVG--AAPAS 58
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKF 139
F AR GC LI + ++L G L + + G R + F
Sbjct: 59 F-ARVGCEALIRDWQQLPNGLLGIRVEGGRRFDVQTF 94
>gi|22300003|ref|NP_683250.1| ATP-dependent proteinase [Thermosynechococcus elongatus BP-1]
gi|22296188|dbj|BAC10012.1| tlr2461 [Thermosynechococcus elongatus BP-1]
Length = 212
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+P+ P + VL P LH++E RY ++ L + F + DP +
Sbjct: 11 LPIFPLP-DVVLFPGRPLPLHIFEFRYRIMMNTILESDRRFGIVMWDP--------QTGR 61
Query: 105 AARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQD-TTSASPS 162
A GC + ERL D L+ G R +I+ + + P+ G V ++D TS
Sbjct: 62 PATVGCCAEVRRYERLPDDRMLIDSLGQQRFRILDYVREKPYRVGLVEWIEDEPTSIDLR 121
Query: 163 DVSSKVLSVKEAVYSLNS------LEIKLKAPKEAVMQTYVLNS 200
++ +V + E V L++ +E+ P A+ +Y + S
Sbjct: 122 PLAQEVRQLLEDVVRLSAKLTEQPMELPPDVPTAALELSYWIAS 165
>gi|339495820|ref|YP_004716113.1| ATP-dependent protease La [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338803192|gb|AEJ07024.1| ATP-dependent protease La [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 194
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEAS 103
+PL P ++ VL P L ++EARYL ++ + L F V +LD + A AS
Sbjct: 3 LPLFP--LDTVLFPGCMLDLQIFEARYLDMVSQCLKAGHGFGVVHILDGSEVG--AAPAS 58
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKF 139
F AR GC LI + ++L G L + + G R + F
Sbjct: 59 F-ARVGCEALIRDWQQLPNGLLGIRVEGGRRFDVQTF 94
>gi|72382910|ref|YP_292265.1| ATP-dependent protease La (LON) domain [Prochlorococcus marinus
str. NATL2A]
gi|72002760|gb|AAZ58562.1| peptidase S16, lon N-terminal protein [Prochlorococcus marinus str.
NATL2A]
Length = 220
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 40/239 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P E LH++E RY +L+ L F DPI A
Sbjct: 9 LPLFPLP-EVVLFPQEYLPLHIFETRYRVMLQSVLKSDSRFGVVRWDPI--------AKK 59
Query: 105 AARCGCLV-LIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC +I++ D + + G R +I++ PF+ V + D +
Sbjct: 60 MADVGCCAEIIKHQTSQDGRSNIVTIGQQRFRILEIISETPFINALVSWVDDEQISD--- 116
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQ-PSLDCDEAFIPSLAE 222
+K+L +K++V A K+ V T L +EK+ P +P +
Sbjct: 117 -QTKLLELKDSVSI---------ALKDVVSLTSKLTE---SEKELPD------SLPDIPR 157
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF + G +E Q+ L +++ +T QRL E ++ + LAA+ A++
Sbjct: 158 ELSFWIAAHLGGPVANE-----QQNL--LEITNTFQRLEREYELLDHTRKQLAARTALK 209
>gi|402489771|ref|ZP_10836564.1| peptidase S16 [Rhizobium sp. CCGE 510]
gi|401811110|gb|EJT03479.1| peptidase S16 [Rhizobium sp. CCGE 510]
Length = 223
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
+L+P+ L+++E RYLA+L+ AL +L + V E A GCL I
Sbjct: 27 LLLPAGQLPLNIFEPRYLAMLDAALTGNRL-IGMVQPAFGEHEDKGGDPNLAAVGCLGRI 85
Query: 115 EN-VERLDIGALVSIRGVGRVKIV-KFFQADPFLKGEVIP-MQDTTSASPSDVSSK--VL 169
+ E D +VS+ GV R +++ + +DPF ++P + D ++A+ + + +L
Sbjct: 86 TSFAETGDGRYIVSLTGVCRFRLLEEKATSDPFRTFRIVPFIADLSAANEEEAVDRAALL 145
Query: 170 SVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW------AEKQPSLDC 212
+ +A + N LE ++ + A T V NSL AEKQ L+
Sbjct: 146 TAFKAYLAANKLEADWESVERASNLTLV-NSLAMMSPFGPAEKQALLEA 193
>gi|146284099|ref|YP_001174252.1| ATP-dependent protease La [Pseudomonas stutzeri A1501]
gi|145572304|gb|ABP81410.1| ATP-dependent protease La domain protein [Pseudomonas stutzeri
A1501]
Length = 194
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEAS 103
+PL P ++ VL P L ++EARYL ++ + L F V +LD + A AS
Sbjct: 3 LPLFP--LDTVLFPGCMLDLQIFEARYLDMVSQCLKAGHGFGVVHILDGSEVG--AAPAS 58
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKF 139
F AR GC LI + ++L G L + + G R + F
Sbjct: 59 F-ARVGCEALIRDWQQLPNGLLGIRVEGGRRFDVQTF 94
>gi|78185591|ref|YP_378025.1| peptidase S16, lon-like [Synechococcus sp. CC9902]
gi|78169885|gb|ABB26982.1| Peptidase S16, lon-like [Synechococcus sp. CC9902]
Length = 217
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 38/241 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P + LH++E+RY LL+ L K F +DP E
Sbjct: 14 LPLFPLP-DVVLFPQQLLPLHIFESRYRMLLQSVLESDKRFGIVRIDP--------ETGE 64
Query: 105 AARCGCLV-LIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC ++++ D + V G R +++ + P+ V ++D A
Sbjct: 65 MADIGCCAEVLQHQTSEDGRSYVVTLGQQRFRLLNITRDTPYRTAMVSWIEDGPVADMES 124
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
++S V A+ + +L KL+ + L D +P L
Sbjct: 125 LTSLRDQVSGALNDVVTLTAKLQ------------------NRDVELPDD---LPDLPRE 163
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQAL 283
+SF G+ +Q+ L ++L DT RL+ E ++ + LAA+ + L
Sbjct: 164 LSFWI-----GAHLDNRAAAEQQTL--LELTDTHDRLHRQFEMLDHTRRQLAARTVLMDL 216
Query: 284 E 284
+
Sbjct: 217 K 217
>gi|87198292|ref|YP_495549.1| peptidase S16, lon-like [Novosphingobium aromaticivorans DSM 12444]
gi|87133973|gb|ABD24715.1| peptidase S16, lon-like protein [Novosphingobium aromaticivorans
DSM 12444]
Length = 209
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 36 LKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISI 95
+ NA + + + P VL P LH++E RY A++ ++L R + ++ P S
Sbjct: 1 MGANANATRLSIFPLT-GAVLYPGLQLPLHIFEPRYRAMVSDSLARDRRIA--MIQPQS- 56
Query: 96 SEYATEASFAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVK 138
E + R GC+ I +VE L+ G + + G+ R +IV+
Sbjct: 57 ---PVEGAPLFRVGCVGRIADVEALEDGRYNIVLEGLSRFRIVR 97
>gi|120555332|ref|YP_959683.1| peptidase S16, lon domain-containing protein [Marinobacter
aquaeolei VT8]
gi|120325181|gb|ABM19496.1| peptidase S16, lon domain protein [Marinobacter aquaeolei VT8]
Length = 193
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
VPL P +N +++P L L+E RY+ +L L + FV +L +E ASF
Sbjct: 3 VPLFP--LNSIILPGGRIPLQLFEPRYIDMLTRCLKEDRGFVVVLLR--EGAETEARASF 58
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLK-GEV 150
G V I + ++LD G L +++ G +V +++ +Q + L G+V
Sbjct: 59 YD-IGTYVRIIDFQQLDNGLLGITVEGDYKVSVIRSWQQEDGLNVGDV 105
>gi|213406537|ref|XP_002174040.1| ubiquitin-protein ligase E3 [Schizosaccharomyces japonicus yFS275]
gi|212002087|gb|EEB07747.1| ubiquitin-protein ligase E3 [Schizosaccharomyces japonicus yFS275]
Length = 484
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 48 LPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS---- 103
+P + V P S LH++E RY +LE + K F + P+ +S+ +
Sbjct: 249 MPLFVCMVAYPHMSTFLHIFEPRYKIMLERCMEGTKRFC--ITMPLQVSKRRAQNEQPRE 306
Query: 104 ---------FAARCGCLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQAD---PFLKGE 149
F A+ G ++ I E+L G +LV RG R KI+ FQ+D P +K E
Sbjct: 307 LRNARGQRLFCAQYGTVMEILTAEQLPDGRSLVEARGTCRFKILD-FQSDGLYPMVKVE 364
>gi|422651811|ref|ZP_16714602.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330964885|gb|EGH65145.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 196
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
+ +PL P +N VL P L L+EARYL ++ + + + F + SE
Sbjct: 1 MTLPLFP--LNAVLFPGCVLDLQLFEARYLDMIGRCMKQGEGFGVVCI--TQGSEVGIVP 56
Query: 103 SFAARCGCLVLIENVERLDIGALVSIRGVG--RVKIV 137
+R GC L+E+ ++ D G L+ IR VG R +++
Sbjct: 57 DGYSRIGCEALVEDFQQQDNG-LLGIRVVGGRRFRVI 92
>gi|254391622|ref|ZP_05006821.1| peptidase S16 [Streptomyces clavuligerus ATCC 27064]
gi|197705308|gb|EDY51120.1| peptidase S16 [Streptomyces clavuligerus ATCC 27064]
Length = 246
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 30/148 (20%)
Query: 41 TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRK----KLFVYFVL------ 90
T+ +PL P N VL P L+++E RY A++ E L + +LF +
Sbjct: 2 TTARLPLFPLNT--VLFPGLVLPLNVFEERYRAMMRELLKKDGSEPRLFAVVAIRDGHEV 59
Query: 91 --------DPISISEYATEASFAAR-------CGCLVLIENV-ERLDIGALVSIRGVGRV 134
DP ++ E A F GC+ + ER D G V G RV
Sbjct: 60 APTAPGLPDPTALPERGPAAGFGEDPIRVFHPVGCVADAATIREREDGGFEVIATGTTRV 119
Query: 135 KIVKFFQADPFLKGEV--IPMQDTTSAS 160
+++ + P+L EV IP Q A
Sbjct: 120 RLLSVDSSGPYLTAEVEEIPEQTGEGAG 147
>gi|359398741|ref|ZP_09191757.1| peptidase S16, lon-like protein [Novosphingobium pentaromativorans
US6-1]
gi|357599979|gb|EHJ61682.1| peptidase S16, lon-like protein [Novosphingobium pentaromativorans
US6-1]
Length = 203
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
VL P LH++E RY A++ +AL R +L ++ P E A S GCL I
Sbjct: 13 VLYPGLQLPLHIFEPRYRAMISDALARDRLIG--MIQPQRPEEGAPLFSI----GCLGRI 66
Query: 115 ENVERLDIGAL-VSIRGVGRVKIVKFFQ-ADPFLKGEVIPMQDTTSASPSDVSSKVLSVK 172
+VE L+ G + + G R +IVK PF + E ++D S
Sbjct: 67 GDVEALEDGRFNIILEGESRFRIVKELDVTTPFRQVEAELIED--------------SED 112
Query: 173 EAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWA 204
EA+ + + +A + A MQ Y ++ Q A
Sbjct: 113 EALAPVERASFEREARRFADMQGYAVDWDQVA 144
>gi|294812103|ref|ZP_06770746.1| Peptidase S16 [Streptomyces clavuligerus ATCC 27064]
gi|326440588|ref|ZP_08215322.1| hypothetical protein SclaA2_05958 [Streptomyces clavuligerus ATCC
27064]
gi|294324702|gb|EFG06345.1| Peptidase S16 [Streptomyces clavuligerus ATCC 27064]
Length = 249
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 30/148 (20%)
Query: 41 TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRK----KLFVYFVL------ 90
T+ +PL P N VL P L+++E RY A++ E L + +LF +
Sbjct: 5 TTARLPLFPLNT--VLFPGLVLPLNVFEERYRAMMRELLKKDGSEPRLFAVVAIRDGHEV 62
Query: 91 --------DPISISEYATEASFAAR-------CGCLVLIENV-ERLDIGALVSIRGVGRV 134
DP ++ E A F GC+ + ER D G V G RV
Sbjct: 63 APTAPGLPDPTALPERGPAAGFGEDPIRVFHPVGCVADAATIREREDGGFEVIATGTTRV 122
Query: 135 KIVKFFQADPFLKGEV--IPMQDTTSAS 160
+++ + P+L EV IP Q A
Sbjct: 123 RLLSVDSSGPYLTAEVEEIPEQTGEGAG 150
>gi|428209681|ref|YP_007094034.1| peptidase S16 lon domain-containing protein [Chroococcidiopsis
thermalis PCC 7203]
gi|428011602|gb|AFY90165.1| peptidase S16 lon domain protein [Chroococcidiopsis thermalis PCC
7203]
Length = 214
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 41/238 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P+ LH++E RY ++ L + F + DP+
Sbjct: 12 LPLFPLP-EVVLFPNRPLPLHIFEFRYRIMMNTILESDRRFGVLLWDPVQ--------GQ 62
Query: 105 AARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
AR GC I +RL D V+ G R +++++ + P+ G V ++D D
Sbjct: 63 PARVGCCAEIIQYQRLPDDRMRVATLGQQRFRVLEYVREKPYKVGLVEWIEDNPPQ--KD 120
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+ V++ + + L KL + +D E IP L
Sbjct: 121 LRPLAREVEQLLRDVVRLSAKL--------------------TEQEIDLPEN-IPDLPTE 159
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ S L + E+ ++++DT RL + ++ + + LAA+ ++
Sbjct: 160 LSYW--------VASNLYGVAAEQQTLLEMQDTAARLEREADILKSTRNHLAARTVLK 209
>gi|298156353|gb|EFH97452.1| peptidase S16 lon domain protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 196
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
+ +PL P +N VL P L L+EARYL ++ + + + F + SE T
Sbjct: 1 MTLPLFP--LNAVLFPGCVLDLQLFEARYLDMIGRCMKQGEGFGVVCI--TEGSEVGTVP 56
Query: 103 SFAARCGCLVLIENVERLDIGALVSIRGVG--RVKIVKF-FQADPFLKGEVIPMQDTTSA 159
+ GC L+ + ++ D G L+ IR VG R ++V Q D L EV +Q+
Sbjct: 57 GGYSPIGCEALVTDFQQQDNG-LLGIRVVGGRRFRVVAAEVQRDQLLMAEVEWLQEPVER 115
Query: 160 SPSDVSSKVLSVKEAV 175
+ + ++++ EA+
Sbjct: 116 PLQEEDADLVALLEAL 131
>gi|308050692|ref|YP_003914258.1| peptidase S16 lon domain-containing protein [Ferrimonas balearica
DSM 9799]
gi|307632882|gb|ADN77184.1| peptidase S16 lon domain protein [Ferrimonas balearica DSM 9799]
Length = 193
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + L P L ++E RY+ ++ E+ R+ F +LDP + T
Sbjct: 7 LPLFPLTSH--LFPGGRLPLRIFEPRYVRMVRESFDREHAFAMCMLDPKGNKDANTHIWP 64
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKF-FQADPFLKGEVIPMQDTTSASP 161
A LV + + + L+ G L +++ G+ +V+I+ + D G V PM D A+P
Sbjct: 65 LA---TLVKVVDFDALEDGMLGITVEGIQKVEIMTIRTEPDELRLGRVRPM-DNWQATP 119
>gi|340777277|ref|ZP_08697220.1| Lon-like ATP-dependent protease La [Acetobacter aceti NBRC 14818]
Length = 238
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAA-----RCG 109
+L+P L+++E RY+ L+E+AL ++L ++ P SE + FAA G
Sbjct: 42 LLLPRGKLPLNVFEPRYIGLIEDALADQRLIG--IIQP--FSEIDDDEDFAAEPHLFEVG 97
Query: 110 CLVLIEN-VERLDIGALVSIRGVGRVKIVK 138
C+ I + VERLD +++ G+ R + ++
Sbjct: 98 CIGRITSFVERLDNTYAITLTGISRFRYLR 127
>gi|405377367|ref|ZP_11031310.1| peptidase S16, lon domain protein [Rhizobium sp. CF142]
gi|397326180|gb|EJJ30502.1| peptidase S16, lon domain protein [Rhizobium sp. CF142]
Length = 223
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
+L+P+ L+++E RYLA+ + AL +L + V E T A A GCL I
Sbjct: 27 LLLPAGQLPLNIFEPRYLAMFDAALTGNRL-IGMVQPAHGEHEDKTHAPELAAVGCLGRI 85
Query: 115 EN-VERLDIGALVSIRGVGRVKIV-KFFQADPFLKGEVIP-MQDTTSASPSDV--SSKVL 169
+ E D +VS+ GV R +++ + PF + P + D ++ + D S +L
Sbjct: 86 TSYAETGDGRYIVSLTGVCRFRLLEERSHGQPFRSFRIAPFISDLSAENEEDAVDRSALL 145
Query: 170 SVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW------AEKQPSLDC 212
+ +A N LE ++ + A T V NSL AEKQ L+
Sbjct: 146 TAFKAYLDANKLEADWESVERASNLTLV-NSLAMMSPFGPAEKQALLEA 193
>gi|116072128|ref|ZP_01469396.1| Peptidase S16, lon-like protein [Synechococcus sp. BL107]
gi|116065751|gb|EAU71509.1| Peptidase S16, lon-like protein [Synechococcus sp. BL107]
Length = 212
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 38/241 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P + LH++E+RY LL+ L K F +DP E
Sbjct: 9 LPLFPLP-DVVLFPQQLLPLHIFESRYRMLLQSVLESDKRFGIVRIDP--------ETGE 59
Query: 105 AARCGCLV-LIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC ++++ D + V G R +++ + P+ V ++D A
Sbjct: 60 MADIGCCAEVLQHQTSEDGRSYVVTLGQQRFRLLNITRDTPYRTAMVSWIEDGPVADMES 119
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
++S V A+ + +L KL+ ++ E +P L
Sbjct: 120 LTSLRDQVSGALNDVVTLTAKLQN-----------RDVELPED----------LPDLPRE 158
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQAL 283
+SF G+ +Q+ L ++L DT RL+ E ++ + LAA+ + L
Sbjct: 159 LSFWI-----GAHLDNRAAAEQQTL--LELTDTHDRLHRQFEMLDHTRRQLAARTVLMDL 211
Query: 284 E 284
+
Sbjct: 212 K 212
>gi|424897455|ref|ZP_18321029.1| peptidase S16, lon domain protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393181682|gb|EJC81721.1| peptidase S16, lon domain protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 233
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
+L+P+ L+++E RYLA+L+ AL +L + V + E A GCL I
Sbjct: 37 LLLPAGQLPLNIFEPRYLAMLDAALTGNRL-IGMVQPALGEHEDKGGDPHLAAVGCLGRI 95
Query: 115 EN-VERLDIGALVSIRGVGRVKIV-KFFQADPFLKGEVIP-MQDTTSASPSDVSSK--VL 169
+ E D +VS+ GV R +++ + +DPF + P + D ++A+ + + +L
Sbjct: 96 TSFAETGDGRYIVSLTGVCRFRLLEEKATSDPFRTFRIAPFIADLSAANEEEAVDRAALL 155
Query: 170 SVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW------AEKQPSLDC 212
+ +A N LE ++ + A T V NSL AEKQ L+
Sbjct: 156 TAFKAYLDANKLEADWESVERASNLTLV-NSLAMMSPFGPAEKQALLEA 203
>gi|330813363|ref|YP_004357602.1| Lon protease [Candidatus Pelagibacter sp. IMCC9063]
gi|327486458|gb|AEA80863.1| uncharacterized protein containing N-terminal domain of Lon
protease [Candidatus Pelagibacter sp. IMCC9063]
Length = 222
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+P+ P + N + P+ L+++E RY ++E+AL + K + + ++ +E
Sbjct: 15 IPIFPLS-NAIFFPNTVMPLNIFEPRYKQMIEDALDKNK---FIGMAQPNLQNLQSEKPD 70
Query: 105 AARCGCLVLIENVERLDIGA-LVSIRGVGRVKIVK 138
GC+ +I + G LV++ GV R K++K
Sbjct: 71 LFNIGCVGMISKHNKTSQGTYLVNLEGVVRFKVIK 105
>gi|268317346|ref|YP_003291065.1| peptidase S16 lon domain-containing protein [Rhodothermus marinus
DSM 4252]
gi|262334880|gb|ACY48677.1| peptidase S16 lon domain protein [Rhodothermus marinus DSM 4252]
Length = 213
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P E LH++E RY L+ L + F + EAS
Sbjct: 6 LPLFPLEV--VLYPGEQLPLHIFEPRYRRLVTRCLEEDRPFGIVL----------AEASK 53
Query: 105 AARCGCLVLIENV-ERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEV 150
A+ G L I V R G + + + G R +IV+ + +P+L +V
Sbjct: 54 LAQVGSLARITRVLARYGDGRMDILVTGEDRFRIVQLYSDEPYLTADV 101
>gi|422646357|ref|ZP_16709490.1| ATP-dependent protease La [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959904|gb|EGH60164.1| ATP-dependent protease La [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 196
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
+ +PL P +N VL P L L+EARYL ++ + + + F + SE
Sbjct: 1 MTLPLFP--LNAVLFPGCILDLQLFEARYLDMMGRCMKQGEGFGVVCI--TEGSETGPVP 56
Query: 103 SFAARCGCLVLIENVERLDIGALVSIRGVG--RVKIV 137
+R GC L+++ ++ D G L+ IR VG R ++V
Sbjct: 57 GGYSRIGCEALVQDFQQQDNG-LLGIRVVGGRRFRVV 92
>gi|334139833|ref|YP_004533032.1| peptidase S16, lon-like [Novosphingobium sp. PP1Y]
gi|333937856|emb|CCA91214.1| peptidase S16, lon-like [Novosphingobium sp. PP1Y]
Length = 203
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
VL P LH++E RY A++ +AL R +L ++ P E A S GCL I
Sbjct: 13 VLYPGLQLPLHIFEPRYRAMISDALARDRLIG--MIQPQRPEEGAPLFSI----GCLGRI 66
Query: 115 ENVERLDIGAL-VSIRGVGRVKIVK 138
+VE L+ G + + G R +IVK
Sbjct: 67 GDVEALEDGRFNIILEGESRFRIVK 91
>gi|356508525|ref|XP_003523006.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Glycine max]
Length = 486
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 36/204 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPI-SISEYATEAS 103
V LLP + +V++P + L+++E RY ++ + +LD S++E+A
Sbjct: 278 VDLLPLFVMDVVIPCQRFPLNIFEPRYRLMVRRIMEGNHRMGMAILDSTGSLAEFA---- 333
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQD------- 155
C V I E L G + I R +I+ + D + EV +QD
Sbjct: 334 ------CEVEITECEPLPDGRFYIEIESRRRFRIIHSWDQDGYRVAEVEWIQDIMPPEGT 387
Query: 156 --------TTSASPSDVSSKVLSVKEAVYS-------LNSLEIKLKAPKEAVMQTYVLNS 200
T + D S + KEA L S+E+ + +PK+ ++ L +
Sbjct: 388 SERDTLQQQTYNAVEDARSWIARAKEAARHDQRKLERLASVEVMMPSPKDPERFSFWLAT 447
Query: 201 LQWAEKQPSLDCDEAFIPSLAERV 224
L + ++P+ D I AER+
Sbjct: 448 L--SNRRPAERLDLLRIRDTAERI 469
>gi|71736785|ref|YP_276762.1| ATP-dependent protease La [Pseudomonas syringae pv. phaseolicola
1448A]
gi|257482340|ref|ZP_05636381.1| ATP-dependent protease La [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|289625645|ref|ZP_06458599.1| ATP-dependent protease La [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289647300|ref|ZP_06478643.1| ATP-dependent protease La [Pseudomonas syringae pv. aesculi str.
2250]
gi|416018970|ref|ZP_11565883.1| ATP-dependent protease La [Pseudomonas syringae pv. glycinea str.
B076]
gi|416024178|ref|ZP_11568345.1| ATP-dependent protease La [Pseudomonas syringae pv. glycinea str.
race 4]
gi|422581110|ref|ZP_16656254.1| ATP-dependent protease La [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|422604008|ref|ZP_16676026.1| ATP-dependent protease La [Pseudomonas syringae pv. mori str.
301020]
gi|422680483|ref|ZP_16738755.1| ATP-dependent protease La [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|71557338|gb|AAZ36549.1| ATP-dependent protease La domain protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322377|gb|EFW78471.1| ATP-dependent protease La [Pseudomonas syringae pv. glycinea str.
B076]
gi|320330725|gb|EFW86700.1| ATP-dependent protease La [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330865961|gb|EGH00670.1| ATP-dependent protease La [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330887119|gb|EGH20329.1| ATP-dependent protease La [Pseudomonas syringae pv. mori str.
301020]
gi|331009829|gb|EGH89885.1| ATP-dependent protease La [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
Length = 196
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
+ +PL P +N VL P L L+EARYL ++ + + + F + SE T
Sbjct: 1 MTLPLFP--LNAVLFPGCVLDLQLFEARYLDMIGRCMKQGEGFGVVCI--TEGSEVGTVP 56
Query: 103 SFAARCGCLVLIENVERLDIGALVSIRGVG--RVKIVKF-FQADPFLKGEVIPMQDTTSA 159
+ GC L+ + ++ D G L+ IR VG R ++V Q D L EV +Q+
Sbjct: 57 GGYSPIGCEALVTDFQQQDNG-LLGIRVVGGRRFRVVAAEVQRDQLLVAEVEWLQEPVER 115
Query: 160 SPSDVSSKVLSVKEAV 175
+ + ++++ EA+
Sbjct: 116 PLQEEDADLVALLEAL 131
>gi|256419554|ref|YP_003120207.1| peptidase S16 lon domain-containing protein [Chitinophaga pinensis
DSM 2588]
gi|256034462|gb|ACU58006.1| peptidase S16 lon domain protein [Chitinophaga pinensis DSM 2588]
Length = 211
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEAS 103
+P+ P I + P E LH++E RY L++E + K F + V+D ++EY
Sbjct: 5 IPIFPLGI--AVYPDEQLNLHIFEPRYKQLIKECIAENKPFGIPSVVDR-RVAEY----- 56
Query: 104 FAARCGCLVLIENVER-LDIGAL-VSIRGVGRVKIVKFFQA--DPFLKGEVIPMQDTTSA 159
G LV I +E+ D G L V RG+ +I++ ++ D G ++ D +
Sbjct: 57 -----GTLVEIIRIEKTYDNGELDVVTRGIKVFRILEVIKSIPDKMFAGAIVSYPDNQFS 111
Query: 160 SPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAV 192
S + + ++V+ ++S+ + + EA+
Sbjct: 112 SNARLHAQVVHAMRELHSILQINKNFQKEDEAL 144
>gi|455644141|gb|EMF23252.1| hypothetical protein H114_29580 [Streptomyces gancidicus BKS 13-15]
Length = 246
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 41 TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALV----RKKLFVYFVL------ 90
T++ +PL P N VL P L+++E RY A++ E L + F +
Sbjct: 2 TTVRLPLFPLNT--VLFPGLVLPLNVFEERYRAMMRELLKTPEDEPRQFAVVAIRDGHEV 59
Query: 91 --------DPISISEYATEASFAA-------RCGCLVLIENV-ERLDIGALVSIRGVGRV 134
DP ++ E A F A + GC+ + ER D V G R+
Sbjct: 60 APSAPGLPDPTAVPERGPAAGFGADPLRAFHKVGCVADAATIRERPDGTFEVLATGTTRM 119
Query: 135 KIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKVL 169
+++ + PFL E+ P+++ ++ VL
Sbjct: 120 RLLSVDASGPFLTAELEPLEEDPGEEAGPLAEGVL 154
>gi|359491313|ref|XP_002284678.2| PREDICTED: probable receptor-like protein kinase At5g61350 [Vitis
vinifera]
Length = 1383
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 29/228 (12%)
Query: 41 TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYAT 100
T+ LLP + +V++P + +L+++E RY ++ + ++D +
Sbjct: 273 TNFGFDLLPLFVMDVVLPCQKVLLNIFEPRYRLMVRRIMEGNHRMGMVIID--------S 324
Query: 101 EASFAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSA 159
A GC V I + L G + + G R +I+ + D + V +QD
Sbjct: 325 TTGVPAEFGCEVEITECDPLPDGRFYLEVEGRRRFRIINCWDQDGYRVAAVEWVQDIL-- 382
Query: 160 SPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPS 219
P + +S A Y+ + +K KEA Q + L EA +P+
Sbjct: 383 PPDRTKEQEMSSNAAKYA----RLWIKRAKEAAWQD--------RRRLAELCHAEAMMPT 430
Query: 220 LAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFV 267
+ F+ + ++G + + E+L + +RDTK+R+ L ++
Sbjct: 431 PQDPELFSFW--LAGLSN----RRPPERLDLLYIRDTKERIRRGLIYM 472
>gi|444910334|ref|ZP_21230519.1| hypothetical protein D187_08604 [Cystobacter fuscus DSM 2262]
gi|444719271|gb|ELW60068.1| hypothetical protein D187_08604 [Cystobacter fuscus DSM 2262]
Length = 219
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
VL+P LH++E RY AL+ +AL K+ L+P +YA ++I
Sbjct: 24 VLLPHAVLPLHIFEPRYRALVRDALAGDKVMALAQLEPGWEGQYAERPPLQPMMCAGLII 83
Query: 115 ENVERLDIGALVSIRGVGRVKIVKFFQADPFLKG-EVIPMQDTTSASPSD 163
+ E D + ++GV R +++ AD + V P+ D P +
Sbjct: 84 WHEELPDGRYNILLQGVCRARLLAELPADKLYREVRVHPLPDPVYQGPEE 133
>gi|124026652|ref|YP_001015767.1| ATP-dependent protease La [Prochlorococcus marinus str. NATL1A]
gi|123961720|gb|ABM76503.1| ATP-dependent protease La (LON) domain [Prochlorococcus marinus
str. NATL1A]
Length = 220
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 38/238 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P E LH++E RY +L+ L F DPI A
Sbjct: 9 LPLFPLP-EVVLFPQEYLPLHIFETRYRVMLQSVLKSDSRFGVVRWDPI--------AKK 59
Query: 105 AARCGCLV-LIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC +I++ D + + G R +I++ PF+ V + D + +
Sbjct: 60 MADVGCCAEIIKHQTSQDGRSNIVTIGQQRFRILEIISETPFINALVSWVDDEQISDQTQ 119
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+ SV A+ + SL KL ++ + + +P +
Sbjct: 120 LLELKDSVSIALKDVVSLTSKLTESEKELPDS---------------------LPDIPRE 158
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF + G SE Q+ L +++ +T RL E ++ + LAA+ A++
Sbjct: 159 LSFWIAAHLGGPVASE-----QQNL--LEITNTFHRLEREYELLDHTRKQLAARTALK 209
>gi|398954484|ref|ZP_10676020.1| peptidase S16, lon domain protein [Pseudomonas sp. GM33]
gi|398152503|gb|EJM41022.1| peptidase S16, lon domain protein [Pseudomonas sp. GM33]
Length = 196
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEAS 103
+PL P +N VL P L ++EARYL ++ + + F V +LD E +
Sbjct: 3 LPLFP--LNTVLFPGCILDLQIFEARYLDMIGRCMKQGGGFGVVCILDG---EEVGIAPA 57
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKF-FQADPFLKGEVIPMQDTTSASP 161
A GC LI + ++ D G L + ++G R ++++ Q D EV ++D
Sbjct: 58 GYALVGCEALITDFKQQDNGLLGIRVQGGRRFRVLRTEVQRDQLTVAEVEWLEDEPEQPL 117
Query: 162 SDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW 203
D + ++++ +A+ +E L EA Q + N L +
Sbjct: 118 QDEDADLVALLKALAEHPMVE-ALNMGTEATGQQSLANQLAY 158
>gi|332708663|ref|ZP_08428635.1| peptidase S16 lon domain protein [Moorea producens 3L]
gi|332352517|gb|EGJ32085.1| peptidase S16 lon domain protein [Moorea producens 3L]
Length = 213
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 44/248 (17%)
Query: 38 VNATSLVVPLLP-FNINEV-LVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISI 95
V+++S+ V LP F + EV L P LH++E RY ++ L + F + DP+
Sbjct: 2 VSSSSIAVRELPIFPLPEVVLFPGRPLPLHIFEFRYRIMMNTILDSDRRFGVLMWDPVK- 60
Query: 96 SEYATEASFAARCGCLVLIENVERL--DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPM 153
E AT GC + + +RL D +V++ G R +++++ + P+ G V +
Sbjct: 61 QEPAT-------VGCCAEVIHFQRLPDDRMKIVTL-GQQRFRLLEYVREKPYRVGLVEWI 112
Query: 154 QDTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCD 213
+D A D+ K V + + + L KL K + +
Sbjct: 113 EDQPPA--KDLKPKAKDVAQLLRDVVRLSAKLTNQKIELPED------------------ 152
Query: 214 EAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISM 273
+P L +S+ + G V L+Q+ L ++ DT++RL E + + +
Sbjct: 153 ---LPDLPIELSYWVASNLYG------VALEQQAL--LETLDTEKRLERETEILTSTRNH 201
Query: 274 LAAKLAIQ 281
LAA+ ++
Sbjct: 202 LAARTVLK 209
>gi|428169129|gb|EKX38066.1| hypothetical protein GUITHDRAFT_165315, partial [Guillardia theta
CCMP2712]
Length = 320
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 42 SLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEAL-VRKKLFVYFVLDPISISEYA- 99
S +P + + +++P + K +H+Y+ + +L A+ V+ + V+DP +++E
Sbjct: 77 SAAMPCISVLPDRLILPGQKKQIHVYDQNNIEVLNTAMRVKDGYLCHVVVDPAALAERRF 136
Query: 100 TEASFAARCGCLVLIENVERLDIGALV-SIR----GVGRVKIVKFFQADPFLKGEVIPMQ 154
F L ++ R G SIR G+ RV++ + FQ +PFL
Sbjct: 137 ALCEFGVLLKVLSTSPSIHRNKYGERSDSIRAEVAGLRRVRVHEVFQKEPFLAANTTDTV 196
Query: 155 DTTSASPSDVSSKVLSVKEAVYSLNSLEIKLKAPKEA 191
T S V +L L S E+ L + EA
Sbjct: 197 MITQGEDSQVDPSLLDALNNCKRLRS-ELSLDSRGEA 232
>gi|424916382|ref|ZP_18339746.1| peptidase S16, lon domain protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392852558|gb|EJB05079.1| peptidase S16, lon domain protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 233
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
+L+P+ L+++E RYLA+L+ AL +L + V + E A GCL I
Sbjct: 37 LLLPAGQLPLNIFEPRYLAMLDAALTGNRL-IGMVQPALGEHEDKGGDPNLAAVGCLGRI 95
Query: 115 EN-VERLDIGALVSIRGVGRVKIV-KFFQADPFLKGEVIP-MQDTTSASPSDVSSK--VL 169
+ E D +VS+ GV R +++ + +DPF + P + D ++A+ + + +L
Sbjct: 96 TSFAETGDGRYIVSLTGVCRFRLLEEKTTSDPFRTFRIAPFIADLSAANEEEAVDRAALL 155
Query: 170 SVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW------AEKQPSLDC 212
+ +A N LE ++ + A T V NSL AEKQ L+
Sbjct: 156 TAFKAYLDANKLEADWESVERASNLTLV-NSLAMMSPFGPAEKQALLEA 203
>gi|353236097|emb|CCA68098.1| hypothetical protein PIIN_01966 [Piriformospora indica DSM 11827]
Length = 523
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 49 PFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARC 108
P + ++ P +LH++EARY +L L RK ++ P S T S+
Sbjct: 180 PIFVCQLSFPGMPTVLHIFEARYRLMLRRVLQRKTPQFGMIMYP---SHEGTVVSY---- 232
Query: 109 GCLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSA 159
G ++ I + L G +++ G R +IV+ + D ++ G+V + D + A
Sbjct: 233 GTMLEIRSARILGDGRSIIETWGSYRFRIVRRGEQDGYMVGKVDRIDDLSEA 284
>gi|292491478|ref|YP_003526917.1| ATP-dependent protease La [Nitrosococcus halophilus Nc4]
gi|291580073|gb|ADE14530.1| ATP-dependent protease La [Nitrosococcus halophilus Nc4]
Length = 779
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 46 PLLPFNINEVLVPSESKILHLYEARYLALLEEALV-RKKLFVYFVLDPISISEYATEASF 104
P LP N VL P L + ++ +A +E AL KL F E + F
Sbjct: 7 PTLPLK-NTVLFPHLVLPLSVGRSKSIAAVETALASEDKLIAVFPQHNPRTEEPTADDLF 65
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
R G + +I+ + R + ++G+ RV+ ++ QA+P+L +V TT PSD
Sbjct: 66 --RFGTVGVIKKMARSGDTVQILVQGIERVEQLETVQAEPYLSLKV-----TTLPEPSDT 118
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQ 202
+++ ++ V L I+L P+ V ++++ ++
Sbjct: 119 GTEIEALHRTVIELAGRMIELVQPQVQVSIHHIISDVE 156
>gi|169610461|ref|XP_001798649.1| hypothetical protein SNOG_08329 [Phaeosphaeria nodorum SN15]
gi|160702072|gb|EAT84605.2| hypothetical protein SNOG_08329 [Phaeosphaeria nodorum SN15]
Length = 428
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 48 LPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAAR 107
+P I + +P+ LH++E RY ++ + K F + + S S+ +
Sbjct: 193 MPLFICTLSLPAMPTFLHVFEPRYRLMMRRVIEGNKQFGMVMYNRSSASQGNLGTAPFLE 252
Query: 108 CGCLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSA 159
G L+ I N E L G + + RG+GR K+ D + G V ++D + A
Sbjct: 253 YGTLLEIVNYELLRDGRSFIESRGIGRFKVRDHGMLDGYNVGRVERIEDVSLA 305
>gi|408479197|ref|ZP_11185416.1| putative protease [Pseudomonas sp. R81]
Length = 196
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEASFAARC 108
F +N VL P + L L+EARYL ++ + + + F V +LD E T A
Sbjct: 6 FPLNTVLFPGCTLDLQLFEARYLDMVARCMKKGESFGVVCILDG---QEVGTAPDGYALI 62
Query: 109 GCLVLIENVERLDIGAL-VSIRGVGRVKI 136
GC LI + ++ D G L + + G R ++
Sbjct: 63 GCEALIRDFKQQDNGLLGIRVEGGRRFRV 91
>gi|116075709|ref|ZP_01472968.1| ATP-dependent protease La (LON) domain [Synechococcus sp. RS9916]
gi|116067024|gb|EAU72779.1| ATP-dependent protease La (LON) domain [Synechococcus sp. RS9916]
Length = 219
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P + LH++E+RY +L+ L + F DP T+
Sbjct: 12 LPLFPLP-DVVLFPRDVLPLHIFESRYRMMLQSVLEDDRRFGVVRWDP------QTQTMA 64
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
C C ++++ D + + G R +++ + PF V ++D +
Sbjct: 65 TVGC-CAEVLQHQTAEDGRSNIVTLGQQRFRVLDVVRETPFRTAMVSWIEDEPVEDSEQL 123
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
+ SV +A+ + L KL SL D +P L +
Sbjct: 124 KTLSQSVDQALKDVVELTGKLTG------------------SAASLPDD---LPDLPREL 162
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G V QQ++L ++L DT++RL E ++ + LAA+ ++
Sbjct: 163 SFWIGAHLGGP-----VAEQQQEL--LELTDTRERLQLEFEMLDETRRQLAARTVLR 212
>gi|209551345|ref|YP_002283262.1| peptidase S16 [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209537101|gb|ACI57036.1| peptidase S16 lon domain protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 223
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
+L+P+ L+++E RYLA+L+ AL +L + V + E A GCL I
Sbjct: 27 LLLPAGQLPLNIFEPRYLAMLDAALTGNRL-IGMVQPALGEHEDKGGDPNLAAVGCLGRI 85
Query: 115 EN-VERLDIGALVSIRGVGRVKIV-KFFQADPFLKGEVIP-MQDTTSASPSDVSSK--VL 169
+ E D +VS+ GV R +++ + +DPF + P + D ++A+ + + +L
Sbjct: 86 TSFAETGDGRYIVSLTGVCRFRLLEEKTTSDPFRTFRIAPFIADLSAANEEEAVDRAALL 145
Query: 170 SVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW------AEKQPSLDC 212
+ +A N LE ++ + A T V NSL AEKQ L+
Sbjct: 146 TAFKAYLDANKLEADWESVERASNLTLV-NSLAMMSPFGPAEKQALLEA 193
>gi|316931751|ref|YP_004106733.1| peptidase S16 lon domain-containing protein [Rhodopseudomonas
palustris DX-1]
gi|315599465|gb|ADU42000.1| peptidase S16 lon domain protein [Rhodopseudomonas palustris DX-1]
Length = 225
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V+P+ P +L+P L+++E RYLA++++AL + + + S A E
Sbjct: 16 VIPVFPLP-GALLLPRGQMPLNIFEPRYLAMIDDALRDGHRLIGMIQPDTAHSSEAAEKP 74
Query: 104 FAARCGCLVLIENV-ERLDIGALVSIRGVGRVKIVKFFQ 141
GC+ I + E D ++ + GV R K+V+ Q
Sbjct: 75 ALFSVGCVGRITQLAESGDGRYILELTGVSRFKVVEELQ 113
>gi|365858302|ref|ZP_09398246.1| ATP-dependent protease La domain protein [Acetobacteraceae
bacterium AT-5844]
gi|363714386|gb|EHL97901.1| ATP-dependent protease La domain protein [Acetobacteraceae
bacterium AT-5844]
Length = 220
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 65 HLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIGA 124
+++E RYLA++E+AL ++L + DP +E A + R GCL I + + G
Sbjct: 34 NIFEPRYLAMVEDALGAQRLIGMVLPDPAYPAEGGRPAIY--RVGCLGRIASFAETEDGR 91
Query: 125 -LVSIRGVGRVKIVKFFQADPFLKGEV-------IPMQDTTSASPSDVSSKVLSVKEAVY 176
L+++ G R ++ + P V + +D P+D S +L+ +
Sbjct: 92 YLITLVGTLRYRVARELPDHPHGYRRVQTDFSSFLTDRDPLPPQPADRRSGLLAALRPYF 151
Query: 177 SLNSLEIKLKA 187
+ +++ A
Sbjct: 152 AARRVQVDWAA 162
>gi|197124823|ref|YP_002136774.1| peptidase S16 [Anaeromyxobacter sp. K]
gi|196174672|gb|ACG75645.1| peptidase S16 lon domain protein [Anaeromyxobacter sp. K]
Length = 231
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 33 RSALKVNATSLVVPLLPFNINEVLV-PSESKILHLYEARYLALLEEALVRKKLFVYFVLD 91
R+AL+ +L V F ++ V+V P H++E RY AL+ +AL ++ L
Sbjct: 12 RAALEKACAALKV----FPLHGVVVLPGTPTPFHIFEPRYRALVADALRGDRILAVPGLT 67
Query: 92 PISISEYATEASFAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVK 138
+ ++ F C +IE ER D G + +RGV RV++++
Sbjct: 68 TMEAAQQLHPPLFPVAGAC--VIEQEERYDDGRYDLVVRGVARVRLIQ 113
>gi|422594188|ref|ZP_16668479.1| ATP-dependent protease La [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330984496|gb|EGH82599.1| ATP-dependent protease La [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 196
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
+ +PL P +N VL P L L+EARYL ++ + + + F + SE T
Sbjct: 1 MTLPLFP--LNAVLFPGCVLDLQLFEARYLDMIGRCMKQGEGFGVVCI--TEGSEVGTVP 56
Query: 103 SFAARCGCLVLIENVERLDIGALVSIRGVG--RVKIVKF-FQADPFLKGEVIPMQDTTSA 159
+ GC L+ + ++ D G L+ IR VG R ++V Q D L EV +Q+
Sbjct: 57 GGYSPIGCEALVTDFQQQDNG-LLGIRVVGGRRFRVVAAEAQRDQLLVAEVEWLQEPVER 115
Query: 160 SPSDVSSKVLSVKEAV 175
+ + ++++ EA+
Sbjct: 116 PLQEEDADLVALLEAL 131
>gi|148238713|ref|YP_001224100.1| Lon protease domain-containing protein [Synechococcus sp. WH 7803]
gi|147847252|emb|CAK22803.1| Uncharacterized protein, similar to the N-terminal domain of Lon
protease [Synechococcus sp. WH 7803]
Length = 220
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL PS+ LH++E+RY +L+ L + F DP S S
Sbjct: 9 LPLFPLP-DVVLFPSDVLPLHIFESRYRMMLQSVLETDRRFGIVRWDPRS-------QSM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
A+ C +I++ D + + G R +++ + PF V ++D P +
Sbjct: 61 ASIGCCAEVIQHQTGDDGRSNIVTLGQQRFRVLNVTRDTPFRSAMVSWIED----DPVED 116
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
+ + ++KE+V S A K+ V T L + +L D +P L +
Sbjct: 117 MASLHTLKESVAS---------ALKDVVELTGKL-----TDSPTALPED---LPDLPREL 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G V QQ++L ++L T+ RL ++ + LAA+ ++
Sbjct: 160 SFWIGAHLGGP-----VADQQQEL--LELTSTRSRLEQEFSMLDETRRQLAARTVLR 209
>gi|221135517|ref|ZP_03561820.1| ATP-dependent protease La, partial [Glaciecola sp. HTCC2999]
Length = 305
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 36/178 (20%)
Query: 108 CGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDT-TSASPSDVS 165
G + I + +L G + V + G R I +++Q +PF KG ++PM D S +V
Sbjct: 70 TGTIATILQLLKLPDGTVKVLVEGSVRGDIQEYYQHEPFFKGRILPMPDEPVEESDQEVL 129
Query: 166 SK-VLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S+ +S E LN K P E VL SL E+ + LA+
Sbjct: 130 SRSAISQFEGYVKLNK-----KIPPE------VLTSLTGIEE----------VARLAD-- 166
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQA 282
+ AA P+ S EK K +++ ++RL + +EG I +L + I+
Sbjct: 167 TMAAHMPLKLS----------EKQKVLEMHKVEERLEYLMALMEGEIDLLQVEKKIRT 214
>gi|297733938|emb|CBI15185.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 27/232 (11%)
Query: 41 TSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYAT 100
T+ LLP + +V++P + +L+++E RY ++ + ++D S
Sbjct: 273 TNFGFDLLPLFVMDVVLPCQKVLLNIFEPRYRLMVRRIMEGNHRMGMVIID----STTGV 328
Query: 101 EASFAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSA 159
A F GC V I + L G + + G R +I+ + D + V +QD
Sbjct: 329 PAEF----GCEVEITECDPLPDGRFYLEVEGRRRFRIINCWDQDGYRVAAVEWVQDIL-- 382
Query: 160 SPSDVSSKVLSVKE-AVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIP 218
P D + + + ++E + + + +K KEA Q + L EA +P
Sbjct: 383 -PPDRTKEQVDLQEMSSNAAKYARLWIKRAKEAAWQD--------RRRLAELCHAEAMMP 433
Query: 219 SLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGS 270
+ + F+ + ++G + + E+L + +RDTK+R+ L ++ +
Sbjct: 434 TPQDPELFSFW--LAGLSN----RRPPERLDLLYIRDTKERIRRGLIYMRDA 479
>gi|90423468|ref|YP_531838.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB18]
gi|90105482|gb|ABD87519.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
Length = 232
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 213 DEAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSIS 272
D+ F P++AE V+F G ++ E+ + + L+ +DL+ + R+ + L E +
Sbjct: 91 DQLFCPTVAEDVAFGPLN--LGKSRQEVATIVNDTLERLDLKHLRDRVTHKLSGGEKRLV 148
Query: 273 MLAAKLAIQ 281
LAA LA+Q
Sbjct: 149 TLAAVLAMQ 157
>gi|86359558|ref|YP_471450.1| ATP-dependent protease LA 2 protein [Rhizobium etli CFN 42]
gi|86283660|gb|ABC92723.1| ATP-dependent protease LA 2 protein [Rhizobium etli CFN 42]
Length = 228
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
+L+P+ L+++E RYLA+L+ AL +L + V + E A GCL I
Sbjct: 32 LLLPAGQLPLNIFEPRYLAMLDAALAGNRL-IGMVQPALGEHEDKGGEHTLAAVGCLGRI 90
Query: 115 EN-VERLDIGALVSIRGVGRVKIV-KFFQADPFLKGEVIPMQDTTSASPSDVS---SKVL 169
+ E D +VS+ GV R +++ + +DPF + P SA + + + +L
Sbjct: 91 TSFAETGDGRYIVSLTGVCRFRLLEEKVTSDPFRTFRIAPFIADLSAENEEEAVDRTSLL 150
Query: 170 SVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW------AEKQPSLDC 212
+ +A N LE ++ + A T V NSL AEKQ L+
Sbjct: 151 TAFKAYLDANKLEADWESVERASNLTLV-NSLAMMSPFGPAEKQALLEA 198
>gi|192288700|ref|YP_001989305.1| peptidase S16 lon domain-containing protein [Rhodopseudomonas
palustris TIE-1]
gi|192282449|gb|ACE98829.1| peptidase S16 lon domain protein [Rhodopseudomonas palustris TIE-1]
Length = 225
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V+P+ P +L+P L+++E RYLA++++AL + + + S E
Sbjct: 16 VIPVFPL-AGALLLPRGQMPLNIFEPRYLAMIDDALRDGHRLIGMIQPDAAHSSETAEKP 74
Query: 104 FAARCGCLVLIENV-ERLDIGALVSIRGVGRVKIVKFFQA-DPF--LKGEVIPMQDTTSA 159
GC+ I + E D ++ + GV R K+V Q P+ K + P D +A
Sbjct: 75 SLFNVGCVGRITQLAESGDGRYILELTGVSRFKVVDELQVLTPYRQCKVDYFPFVDDFTA 134
Query: 160 SPSDVS---SKVLSVKEAVYSLNSLEIKLK----APKEAVMQTYVLNSLQWA-EKQ 207
+ +LSV N+L++ AP EA++ + S A EKQ
Sbjct: 135 RKGEDEVDRETLLSVLTDFLKANNLKVDWDGVESAPNEALVNALAMMSPYGAPEKQ 190
>gi|134056662|emb|CAK37655.1| unnamed protein product [Aspergillus niger]
Length = 618
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 21 FAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEAL- 79
F Q+++ R + V AT +P ++ + P+ LH++E RY ++ +
Sbjct: 364 FPEQVASRREGSSNEDGVAATGDGERTIPLFVSSLSFPTMPTFLHIFEPRYRTMIHRVMQ 423
Query: 80 VRKKLFVYFVLDPIS-ISEYATEASFAARCGCLVLIENVERLDIG-ALVSIRGVGRVKIV 137
R K F + + + E A F + G ++++E E L G +LV GV R K++
Sbjct: 424 TRDKKFGMVMYNRSGRLQEGLGRAQF-MQYGTVLVVERFELLPDGRSLVIASGVSRFKVI 482
Query: 138 KFFQADPFLKGEVIPMQD 155
F D + G + + D
Sbjct: 483 SFEMVDGYHVGRIQRVDD 500
>gi|404493622|ref|YP_006717728.1| ATP-dependent Lon protease (La) [Pelobacter carbinolicus DSM 2380]
gi|123573890|sp|Q3A334.1|LON2_PELCD RecName: Full=Lon protease 2; AltName: Full=ATP-dependent protease
La 2
gi|77545661|gb|ABA89223.1| ATP-dependent Lon protease (La) [Pelobacter carbinolicus DSM 2380]
Length = 796
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFV---LDPISISEYATE 101
+P+ P + ++V+ P S L + + ++ L+EEAL +L V +DPI+ E
Sbjct: 13 LPVYPLH-DQVIFPHMSFPLFIGK-EHMGLVEEALRNNRLLVVLTVLAIDPITGREQF-- 68
Query: 102 ASFAARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKGEV--IPMQDTTS 158
AR G + I V R + G + + GV RV+++ Q PF V IP ++ +
Sbjct: 69 ----ARVGTICRINQVLRFPEGGCKIILEGVNRVRLITTLQVTPFAMASVSLIPERENRN 124
Query: 159 ASPSDVSSKVLSVKEAVYSLNSL 181
+ + ++++ SL +
Sbjct: 125 SVAQALMQSIIALLRVAQSLGQM 147
>gi|33862062|ref|NP_893623.1| ATP-dependent protease La [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|33634280|emb|CAE19965.1| ATP-dependent protease La (LON) domain [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 218
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P E LH++E+RY +L+ L +F DP + S
Sbjct: 9 LPLFPLP-EVVLFPQEVLPLHIFESRYRIMLKSVLESDSMFGVIKWDP-------NKKSM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
A C +I++ D + + G R ++++ ++ P+ V + D S +
Sbjct: 61 ANVGCCAQIIKHQTAEDGRSNIITLGQQRFQVLEIVRSTPYCSAMVSWITDENIDSFQSL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
SV EA+ + L KL ++ + + N ++ +
Sbjct: 121 DLLRDSVTEALNDVVKLTGKLTNSQKVLPEKLPENPME---------------------L 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G E KL +E R+T RL E ++ + LAA+ A++
Sbjct: 160 SFWIGAHLGGPVAEEQQKLLEE-------RNTHTRLQREFEMLDHTRKQLAARTALK 209
>gi|421589642|ref|ZP_16034759.1| ATP-dependent protease LA 2 protein [Rhizobium sp. Pop5]
gi|403705371|gb|EJZ20975.1| ATP-dependent protease LA 2 protein [Rhizobium sp. Pop5]
Length = 223
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 19/172 (11%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEY---ATEASFAARCGCL 111
+L+P+ L+++E RYLA+L+ AL +L ++ P ++ E+ E S AA GCL
Sbjct: 27 LLLPAGQLPLNIFEPRYLAMLDAALAGNRLI--GMVQP-ALGEHEDKGGEHSLAA-VGCL 82
Query: 112 VLIEN-VERLDIGALVSIRGVGRVKIV-KFFQADPFLKGEVIPMQDTTSASPSDVS---S 166
I + E D +VS+ GV R +++ + DPF + P SA + + +
Sbjct: 83 GRITSFAETGDGRYIVSLTGVCRFRLLEEKATGDPFRTFRIAPFIADLSAENEEEAVDRA 142
Query: 167 KVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW------AEKQPSLDC 212
+L+ +A N LE ++ + A T V NSL AEKQ L+
Sbjct: 143 ALLTAFKAYLDANKLEADWESVERASNLTLV-NSLAMMSPFGPAEKQALLEA 193
>gi|422590430|ref|ZP_16665085.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330877526|gb|EGH11675.1| ATP-dependent protease La domain-containing protein [Pseudomonas
syringae pv. morsprunorum str. M302280]
Length = 196
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 43 LVVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEA 102
+ +PL P +N VL P L L+EARYL ++ + + + F + SE
Sbjct: 1 MTLPLFP--LNAVLFPGCVLDLQLFEARYLDMIGRCMKQGEGFGVVCI--TQGSEVGIVP 56
Query: 103 SFAARCGCLVLIENVERLDIGALVSIRGVGRVK---IVKFFQADPFLKGEVIPMQDTTSA 159
+ GC L+E+ ++ D G L+ IR VG + I Q D L EV +Q+
Sbjct: 57 DGYSLIGCEALVEDFQQQDNG-LLGIRVVGGRRFRVIASEVQRDQLLVAEVEWLQEPEER 115
Query: 160 SPSDVSSKVLSVKEAV 175
+ + ++++ EA+
Sbjct: 116 PIQEEDADLVALLEAL 131
>gi|121715472|ref|XP_001275345.1| ATP-dependent protease (CrgA), putative [Aspergillus clavatus NRRL
1]
gi|119403502|gb|EAW13919.1| ATP-dependent protease (CrgA), putative [Aspergillus clavatus NRRL
1]
Length = 546
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 47 LLPFNINEVLVPSESKILHLYEARYLALLEEALVR-KKLFVYFVLDPISISEYATEASFA 105
+LP +N + P+ LH++E RY ++ + + F + + + + + +
Sbjct: 307 VLPLFVNSLAFPTMPTFLHIFEPRYRLMMRRVMESPDRKFGMLMYNRSGVRQGSLGDAQF 366
Query: 106 ARCGCLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQD 155
+ G ++ IE E L G +LV GV R K+ KF D + G++ + D
Sbjct: 367 LQYGTVLRIERFELLPDGRSLVFANGVSRFKVAKFDIVDGYHVGQIQRVDD 417
>gi|88807946|ref|ZP_01123457.1| ATP-dependent protease La (LON) domain [Synechococcus sp. WH 7805]
gi|88787985|gb|EAR19141.1| ATP-dependent protease La (LON) domain [Synechococcus sp. WH 7805]
Length = 220
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 36/237 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL PS+ LH++E+RY +L+ L + F DP + S
Sbjct: 9 LPLFPLP-DIVLFPSDVLPLHIFESRYRMMLQSVLETDRRFGVVRWDPHT-------QSM 60
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDV 164
A+ C +I++ D + + G R +++ + PF V ++D + +
Sbjct: 61 ASIGCCAEVIQHQTGEDGRSNIVTLGQQRFRVLNVTRETPFRTAMVSWIEDDPVEDMNSL 120
Query: 165 SSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERV 224
S SV A+ + L KL A+ + +P L +
Sbjct: 121 HSLTESVASALKDVVELTGKLTDSPTALPED---------------------LPDLPREL 159
Query: 225 SFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
SF + G V QQ++L ++L T+ RL ++ + LAA+ ++
Sbjct: 160 SFWIGAHLGGP-----VADQQQEL--LELTSTRSRLEQEFSMLDETRRQLAARTVLR 209
>gi|163846826|ref|YP_001634870.1| peptidase S16 lon domain-containing protein [Chloroflexus
aurantiacus J-10-fl]
gi|222524648|ref|YP_002569119.1| peptidase S16 lon domain-containing protein [Chloroflexus sp.
Y-400-fl]
gi|163668115|gb|ABY34481.1| peptidase S16 lon domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222448527|gb|ACM52793.1| peptidase S16 lon domain protein [Chloroflexus sp. Y-400-fl]
Length = 222
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 47 LLP-FNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVL---DPISISEYATEA 102
LLP F + +L P + LH++E RY ++ L ++ F +L + A
Sbjct: 4 LLPLFPLGSLLFPGGTMSLHIFEQRYRLMIGHCLAGEQRFGIVLLRRGHEVIEGRVVDVA 63
Query: 103 SFAARCGCLVLIENVERLDIGA-LVSIRGVGRVKIVKFFQADPFL--KGEVIPMQ--DTT 157
G + +I+ +L+ G L+ + G R +I++ P+L K +++P Q + +
Sbjct: 64 PEPYDVGTVAIIQEYLKLEDGRYLLHVMGQQRFRILQIIDQSPYLVAKVQLLPEQTDNES 123
Query: 158 SASPSDVSSKVLSVKEAVYSLNSLEIKLKA-PKEAVMQTYVL-NSLQ--WAEKQPSLDCD 213
A+ +++ + E + ++ EI++++ P + + Y+L + LQ A+KQ L+ D
Sbjct: 124 IAAATELRNTYQRYWERIATITGTEIEVESLPLDPIKLGYILADRLQIDMAQKQRWLETD 183
>gi|354566122|ref|ZP_08985295.1| peptidase S16 lon domain protein [Fischerella sp. JSC-11]
gi|353546630|gb|EHC16078.1| peptidase S16 lon domain protein [Fischerella sp. JSC-11]
Length = 216
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P++ LH++E RY ++ L + F ++DP+
Sbjct: 12 LPLFPLS-EVVLFPTKQLPLHIFEFRYRIMMNTILESDRRFGVLMVDPVK--------GM 62
Query: 105 AARCGCLVLIENVERL--DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQD 155
A GC I + +RL D ++++ G R +++++ + P+ G V ++D
Sbjct: 63 IANVGCCAEIIHFQRLQDDRMKMITL-GQQRFRVLEYVREKPYPVGLVEWIED 114
>gi|350634602|gb|EHA22964.1| hypothetical protein ASPNIDRAFT_174930 [Aspergillus niger ATCC
1015]
Length = 641
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 21 FAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEAL- 79
F Q+++ R + V AT +P ++ + P+ LH++E RY ++ +
Sbjct: 303 FPEQVASRREGSSNEDGVAATGDGERTIPLFVSSLSFPTMPTFLHIFEPRYRTMIHRVMQ 362
Query: 80 VRKKLFVYFVLDPIS-ISEYATEASFAARCGCLVLIENVERLDIG-ALVSIRGVGRVKIV 137
R K F + + + E A F + G ++++E E L G +LV GV R K++
Sbjct: 363 TRDKKFGMVMYNRSGRLQEGLGRAQF-MQYGTVLVVERFELLPDGRSLVIASGVSRFKVI 421
Query: 138 KFFQADPFLKGEVIPMQD 155
F D + G + + D
Sbjct: 422 SFEMVDGYHVGRIQRVDD 439
>gi|119480997|ref|XP_001260527.1| ATP-dependent protease (CrgA), putative [Neosartorya fischeri NRRL
181]
gi|119408681|gb|EAW18630.1| ATP-dependent protease (CrgA), putative [Neosartorya fischeri NRRL
181]
Length = 543
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 21 FAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEAL- 79
F Q+++ R L + ++PL +N + P+ L ++E RY ++ +
Sbjct: 285 FPDQIASQRQSLAEEQSDSDAGTILPLF---VNSLSFPTMPTFLRIFEPRYCLMIRRVME 341
Query: 80 VRKKLFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIG-ALVSIRGVGRVKIVK 138
R++ F + + + + AS + G ++ +E E L G +L+ GV R K++K
Sbjct: 342 SRERKFGMVMYNRLGRPQGQLGASQFMQYGVVLRVERFEPLPGGRSLIFANGVSRFKVIK 401
Query: 139 FFQADPFLKGEVIPMQDTTSASPSDVSS 166
D + G++ + D A ++ S
Sbjct: 402 SHIVDGYHVGQIQRVDDIPIAEEENLES 429
>gi|317027643|ref|XP_001399743.2| ATP-dependent protease (CrgA) [Aspergillus niger CBS 513.88]
Length = 559
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 21 FAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEAL- 79
F Q+++ R + V AT +P ++ + P+ LH++E RY ++ +
Sbjct: 293 FPEQVASRREGSSNEDGVAATGDGERTIPLFVSSLSFPTMPTFLHIFEPRYRTMIHRVMQ 352
Query: 80 VRKKLFVYFVLDPIS-ISEYATEASFAARCGCLVLIENVERLDIG-ALVSIRGVGRVKIV 137
R K F + + + E A F G ++++E E L G +LV GV R K++
Sbjct: 353 TRDKKFGMVMYNRSGRLQEGLGRAQFMQY-GTVLVVERFELLPDGRSLVIASGVSRFKVI 411
Query: 138 KFFQADPFLKGEVIPMQD 155
F D + G + + D
Sbjct: 412 SFEMVDGYHVGRIQRVDD 429
>gi|428226262|ref|YP_007110359.1| peptidase S16 lon domain-containing protein [Geitlerinema sp. PCC
7407]
gi|427986163|gb|AFY67307.1| peptidase S16 lon domain protein [Geitlerinema sp. PCC 7407]
Length = 216
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 15/147 (10%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P LH++E RY ++ L + F + DP+
Sbjct: 12 LPLFPLP-EVVLFPGRPLPLHIFEFRYRIMMNTILESDRRFGVLMWDPVQ--------GQ 62
Query: 105 AARCGCLVLIENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKG-----EVIPMQDTTS 158
AA GC I +RL D + G R +++++ + P+ G E P D
Sbjct: 63 AAPIGCCAEIVQYQRLPDDRMKIRTLGQQRFRVIEYTREKPYRVGLVEWIEDAPTDDDLR 122
Query: 159 ASPSDVSSKVLSVKEAVYSLNSLEIKL 185
+V + V L S EI+L
Sbjct: 123 PLTHEVDQLLRDVVRLSGKLTSQEIEL 149
>gi|86160721|ref|YP_467506.1| peptidase S16, lon-like [Anaeromyxobacter dehalogenans 2CP-C]
gi|85777232|gb|ABC84069.1| peptidase S16, lon-like protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 231
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 33 RSALKVNATSLVVPLLPFNINEVLV-PSESKILHLYEARYLALLEEALVRKKLFVYFVLD 91
R+AL+ +L V F ++ V+V P H++E RY AL+ +AL ++ L
Sbjct: 12 RAALEKACAALKV----FPLHGVVVLPGTPTPFHIFEPRYRALVGDALRGDRILAVPGLT 67
Query: 92 PISISEYATEASFAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVK 138
+ ++ F C +IE +R D G + +RGV RV++++
Sbjct: 68 TMEAAQQLHPPLFPVAGAC--IIEQEDRYDDGRYDLVVRGVARVRLIQ 113
>gi|148655042|ref|YP_001275247.1| peptidase S16, lon domain-containing protein [Roseiflexus sp. RS-1]
gi|148567152|gb|ABQ89297.1| peptidase S16, lon domain protein [Roseiflexus sp. RS-1]
Length = 232
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 41/204 (20%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVL---------DP--- 92
+PL P ++ VL P LH++E RY ++ + L +++ F +L DP
Sbjct: 3 LPLFP--LHTVLFPGAPISLHIFEERYRLMIGQCLEQQQPFGIVLLRSGSEVNPDDPFIR 60
Query: 93 -----ISI-SEYATEASFAARCGCLVLIENVERLDIGALVSI-RGVGRVKIVKFFQADPF 145
I I + EA G + I +R D G + I +G R ++ Q +P+
Sbjct: 61 SLRRQIGIDDDILREAVVPFEVGTIARITESQRFDDGRYLLIAQGQRRFRVQYIMQHEPY 120
Query: 146 LKGEVIPM-QDTTSASPSDVS----------SKVLSVKEAVYSLNSLEIKLKAPKEAVMQ 194
+ V + +DTT+ SP+ +S + + V Y + L P +AV
Sbjct: 121 IVASVAQLSEDTTNLSPALLSELHRTYDQYWTTIERVTGRTYERDDL------PVDAVEL 174
Query: 195 TYVLN---SLQWAEKQPSLDCDEA 215
+Y L + KQ L+CD A
Sbjct: 175 SYWLAHRLHVDNQRKQRWLECDVA 198
>gi|39933345|ref|NP_945621.1| Lon family ATP-dependent protease [Rhodopseudomonas palustris
CGA009]
gi|39652970|emb|CAE25712.1| putative Lon family ATP-dependent protease [Rhodopseudomonas
palustris CGA009]
Length = 225
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V+P+ P +L+P L+++E RYLA++++AL + + + S E
Sbjct: 16 VIPVFPL-AGALLLPRGQMPLNIFEPRYLAMIDDALRDGHRLIGMIQPDAAHSSETAEKP 74
Query: 104 FAARCGCLVLIENV-ERLDIGALVSIRGVGRVKIVKFFQA-DPF--LKGEVIPMQDTTSA 159
GC+ I + E D ++ + GV R K+V Q P+ K + P D +A
Sbjct: 75 SLFNVGCVGRITQLAESGDGRYILELTGVSRFKVVDELQVLTPYRQCKVDYFPFVDDFTA 134
Query: 160 SPSDVS---SKVLSVKEAVYSLNSLEIKLK----APKEAVMQTYVLNS 200
+ +LSV N+L++ AP EA++ + S
Sbjct: 135 RKGEDEVDRETLLSVLTDFLKANNLKVDWDGVESAPNEALVNALAMMS 182
>gi|262197966|ref|YP_003269175.1| ATP-dependent protease La [Haliangium ochraceum DSM 14365]
gi|262081313|gb|ACY17282.1| ATP-dependent protease La [Haliangium ochraceum DSM 14365]
Length = 812
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
V+P+LP N VL P + + + + L+E+A+ +++ + + + +E E
Sbjct: 17 VIPILPLR-NSVLFPGSIIPIDVGRRKSVRLVEDAISKERPVIGILTQKDARTEDPEEED 75
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
+ GC I V +L V ++GV R +I +F A+PFL +V + D T+ S
Sbjct: 76 MY-KVGCAARILKVIKLAKDNFSVILQGVSRFEIHEFEGAEPFLAAKVEAVPDPTT-SDV 133
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEA 191
++ + V+++K+ + L +L PKEA
Sbjct: 134 ELDALVMNLKDIAKRVVKLMPEL--PKEA 160
>gi|307152011|ref|YP_003887395.1| peptidase S16 lon domain-containing protein [Cyanothece sp. PCC
7822]
gi|306982239|gb|ADN14120.1| peptidase S16 lon domain protein [Cyanothece sp. PCC 7822]
Length = 213
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 107/239 (44%), Gaps = 43/239 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P LH++E RY ++ L + F ++DP+
Sbjct: 12 LPLFPLP-EVVLFPGRPLPLHIFEFRYRIMMNTILDDDRRFGVLMVDPVR--------GE 62
Query: 105 AARCGCLVLIENVERL--DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
A GC I +RL D ++++ G R +++++ + P+ G V ++D SP+
Sbjct: 63 IANVGCCAEIIRFQRLPDDRMKILTV-GQQRFRVLEYVREKPYRVGLVEWIED---ESPT 118
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
+ L L ++ E +++ V S + +++ L D +PSL
Sbjct: 119 E-------------DLRPLAKEV----ENLLRDVVHLSAKLTDQKIELPDD---LPSLPR 158
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ ++G+ + V +Q+ L ++++DT RL E + + S LAA+ A++
Sbjct: 159 ELSYW----IAGNLYN--VAFEQQAL--LEMQDTLARLKREAEILTSTRSHLAARTALK 209
>gi|220919540|ref|YP_002494844.1| peptidase S16 lon domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219957394|gb|ACL67778.1| peptidase S16 lon domain protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 231
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 33 RSALKVNATSLVVPLLPFNINEVLV-PSESKILHLYEARYLALLEEALVRKKLFVYFVLD 91
R+AL+ +L V F ++ V+V P H++E RY AL+ +AL ++ L
Sbjct: 12 RAALEKACAALKV----FPLHGVVVLPGTPTPFHIFEPRYRALVADALRGDRILAVPGLT 67
Query: 92 PISISEYATEASFAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVK 138
+ ++ F C +IE +R D G + +RGV RV++++
Sbjct: 68 TMEAAQQLHPPLFPVAGAC--VIEQEDRYDDGRYDLVVRGVARVRLIQ 113
>gi|427734636|ref|YP_007054180.1| peptidase S16, lon domain-containing protein [Rivularia sp. PCC
7116]
gi|427369677|gb|AFY53633.1| peptidase S16, lon domain protein [Rivularia sp. PCC 7116]
Length = 216
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 100/239 (41%), Gaps = 43/239 (17%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P + VL P+ LH++E RY ++ L + F ++DP
Sbjct: 12 LPLFPLP-DVVLFPTRPLPLHIFEFRYRIMMNTILDSDRRFGVLMVDPAK--------GT 62
Query: 105 AARCGCLVLIENVERL--DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPS 162
A GC I + +RL D ++++ G R +++++ + P+ G V + D +
Sbjct: 63 VANVGCCAEIIHHQRLKDDRMKMLTL-GQQRFRVLEYVREKPYFVGLVEWIDDEEPS--K 119
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAE 222
D+ + V++ + + L KL E+ L D +P+L +
Sbjct: 120 DLRHEASEVEQLLRDVVRLSAKL------------------TEQNIELPQD---LPALPK 158
Query: 223 RVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+S+ S L ++ E+ ++++DT RL E + + + LAA+ ++
Sbjct: 159 ELSYWV--------ASNLYRVAPEQQSLLEMQDTALRLERESEILTSTRNHLAARTVLK 209
>gi|341613543|ref|ZP_08700412.1| ATP-dependent proteinase [Citromicrobium sp. JLT1363]
Length = 201
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
VL P LH++E RY AL+ +AL R + ++ P + A E S GC+ I
Sbjct: 12 VLFPGLQLPLHMFEPRYRALVGDALARDRRIA--MIQP----KQAREGSDLYEVGCVGKI 65
Query: 115 ENVERLDIGAL-VSIRGVGRVKIVKFFQ-ADPF--LKGEVI 151
VE LD G + + G R ++++ + PF ++GE+I
Sbjct: 66 AEVEALDDGRYNLVLDGESRFRMIRELDVSTPFRQVEGELI 106
>gi|374852091|dbj|BAL55032.1| ATP-dependent protease La [uncultured Acidobacteria bacterium]
Length = 231
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+P+ P + VL+P + LH++E RY +L + L +LF +S Y EA
Sbjct: 10 LPIFPLPV--VLIPEMTLPLHIFEPRYRLMLRQCLEGDRLF--------GLS-YHPEAEV 58
Query: 105 A-------ARCGCLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQADPFLKGEV 150
GC I +V L G A + G R +I ++ DP+L E+
Sbjct: 59 GRLAIPDLESVGCAARILHVRPLPDGRANILTIGTERYRITRYLSQDPYLLAEI 112
>gi|269925653|ref|YP_003322276.1| ATP-dependent protease La [Thermobaculum terrenum ATCC BAA-798]
gi|269789313|gb|ACZ41454.1| ATP-dependent protease La [Thermobaculum terrenum ATCC BAA-798]
Length = 808
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
++P+LP + V+ P + + + R + L+++++ ++L V ++ + +
Sbjct: 14 LLPVLPLR-DSVIYPFAVLPIVVGQERSIRLVDDSMRSRRLIVLVAQRSRNVEQAGPDDI 72
Query: 104 FAARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTT 157
+ R G + I ++ R G L + ++GV RV+I+ F P+L + P D T
Sbjct: 73 Y--RIGTVATIHHLVRAPDGTLRIVVQGVQRVRILDFISTQPYLVARIDPAPDQT 125
>gi|241206782|ref|YP_002977878.1| peptidase S16 lon domain-containing protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240860672|gb|ACS58339.1| peptidase S16 lon domain protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 223
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
+L+P+ L+++E RYLA+L+ AL +L + E + AA GCL I
Sbjct: 27 LLLPAGQLPLNIFEPRYLAMLDAALTGNRLIGMVQPAFGEHEDKGGEPNLAA-VGCLGRI 85
Query: 115 EN-VERLDIGALVSIRGVGRVKIV-KFFQADPFLKGEVIP-MQDTTSASPSDVSSK--VL 169
+ E D +VS+ GV R +++ + +DPF + P + D ++A+ + + +L
Sbjct: 86 TSFAETGDGRYIVSLTGVCRFRLLEEKATSDPFRIFRIAPFIADLSAANEEEAVDRAALL 145
Query: 170 SVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQW------AEKQPSLDC 212
+ +A N LE ++ + A T V NSL AEKQ L+
Sbjct: 146 TAFKAYLDANKLEADWESVERASNLTLV-NSLAMMSPFGPAEKQALLEA 193
>gi|408784853|ref|ZP_11196603.1| ATP-dependent protease LA 2 [Rhizobium lupini HPC(L)]
gi|408489192|gb|EKJ97496.1| ATP-dependent protease LA 2 [Rhizobium lupini HPC(L)]
Length = 223
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
VP+ P +L+P L+++E RYLA+++ AL +L + V + + E E
Sbjct: 17 TVPVFPLP-GALLLPEGHLPLNIFEPRYLAMIDTALAGHRL-IGMVQPALHVIESGLEGG 74
Query: 104 FAARCGCLVLIENV-ERLDIGALVSIRGVGRVKIVKFFQA 142
+ GCL I + E D ++S+ GV R ++++ +A
Sbjct: 75 PLSAVGCLGRITSFSETGDGRYIISLTGVCRFRLLEEVEA 114
>gi|71001398|ref|XP_755380.1| ATP-dependent protease (CrgA) [Aspergillus fumigatus Af293]
gi|66853018|gb|EAL93342.1| ATP-dependent protease (CrgA), putative [Aspergillus fumigatus
Af293]
gi|159129454|gb|EDP54568.1| ATP-dependent protease (CrgA), putative [Aspergillus fumigatus
A1163]
Length = 626
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 21 FAGQLSTTRARLRSALKVNATSLVVPLLPFNINEVLVPSESKILHLYEARYLALLEEAL- 79
F+ Q+++ R L V+PL +N + PS L ++E RY ++ +
Sbjct: 286 FSEQIASQRQSLAEEQSDPDAGTVLPLF---VNSLSFPSMPTFLRIFEPRYCLMIRRVME 342
Query: 80 VRKKLFVYFVLDPISISEYATEASFAARCGCLVLIENVERLDIG-ALVSIRGVGRVKIVK 138
R++ F + + + + A+ + G ++ +E E L G +L+ GV R K++K
Sbjct: 343 SRERKFGMVMYNRLGRPQGQLGATQFMQYGVVLRVERFEPLPGGRSLIFAMGVSRFKVIK 402
Query: 139 FFQADPFLKGEVIPMQDTTSASPSDVSS 166
D + G++ + D A ++ S
Sbjct: 403 SHIVDGYHVGQIQRVDDIPIAEEENLES 430
>gi|407786094|ref|ZP_11133240.1| ATP-dependent protease La [Celeribacter baekdonensis B30]
gi|407201826|gb|EKE71822.1| ATP-dependent protease La [Celeribacter baekdonensis B30]
Length = 801
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 46 PLLPFNINEVLVPSESKILHLYEARYLALLEEALVR-KKLFVYFVLDPISISEYATEASF 104
P+LP + V+ P L + + + LEE + + K++ + +DP S+ + + F
Sbjct: 9 PVLPLR-DIVVFPHMVVPLFVGREKSVKALEEVMNQDKQILLAAQMDP-SVDDPDIDGIF 66
Query: 105 AARCGCLVLIENVERLDIGAL-VSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
R G L + + +L G + V + G RV++ +F Q D + + +VIP+++ + P+
Sbjct: 67 --RVGVLANVLQLLKLPDGTVKVLVEGESRVRLTEFTQNDSYFEAQVIPLEE-SEGDPAA 123
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAV 192
+++ + SV+E + ++K P+EA+
Sbjct: 124 ITALLRSVREEFE--HYAKVKKNIPEEAL 150
>gi|229592810|ref|YP_002874929.1| putative protease [Pseudomonas fluorescens SBW25]
gi|229364676|emb|CAY52614.1| putative protease [Pseudomonas fluorescens SBW25]
Length = 196
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 50 FNINEVLVPSESKILHLYEARYLALLEEALVRKKLF-VYFVLDPISISEYATEASFAARC 108
F +N VL P + L L+EARYL ++ + + + F V +LD E A
Sbjct: 6 FPLNTVLFPGCTLDLQLFEARYLDMISRCMKKGESFGVVCILDG---KEVGMAPDGYALI 62
Query: 109 GCLVLIENVERLDIGAL-VSIRGVGRVKIVK-FFQADPFLKGEVIPMQD 155
GC LI + ++ D G L + + G R ++ Q D L +V ++D
Sbjct: 63 GCEALIRDFKQQDNGLLGIRVEGGRRFRVRDAGVQKDQLLVADVQWLED 111
>gi|123966919|ref|YP_001012000.1| ATP-dependent protease La [Prochlorococcus marinus str. MIT 9515]
gi|123201285|gb|ABM72893.1| ATP-dependent protease La (LON) domain [Prochlorococcus marinus
str. MIT 9515]
Length = 218
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 90/238 (37%), Gaps = 38/238 (15%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+PL P VL P E LH++E+RY +L+ L +F DP + S
Sbjct: 9 LPLFPLP-EVVLFPQEVLPLHIFESRYRIMLKSVLESDSMFGVIKWDPNTKS-------- 59
Query: 105 AARCGCLVLIENVERLDIG-ALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSD 163
A GC I + D G + + G R ++++ ++ P+ V + D S
Sbjct: 60 MANVGCCAQIIKHQTADDGRSNIVTLGQQRFQVLEVVRSTPYCSAIVSWITDENIESFQS 119
Query: 164 VSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAER 223
+ SV EA+ + L KL ++ + N ++
Sbjct: 120 LDLLRDSVTEALNDVVKLTSKLTNSQKVLPDKLPENPME--------------------- 158
Query: 224 VSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
+SF + G E KL +E R T RL E ++ + LAA+ A++
Sbjct: 159 LSFWIGAHLGGPVAEEQQKLLEE-------RSTYTRLQREFEMLDHTRKQLAARTALK 209
>gi|443325082|ref|ZP_21053794.1| peptidase S16, lon domain protein [Xenococcus sp. PCC 7305]
gi|442795297|gb|ELS04672.1| peptidase S16, lon domain protein [Xenococcus sp. PCC 7305]
Length = 212
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 47/241 (19%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPIS--ISEYATEA 102
+PL P VL P+ LH++E RY ++ L + F +DP + I+EY
Sbjct: 11 LPLFPLP-EVVLFPTRPLPLHIFEFRYRIMVNTILESDRRFGVLSIDPATGKIAEY---- 65
Query: 103 SFAARCGCLVLIENVERL--DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSAS 160
GC I + ERL D ++++ G R +++++ + P+ G V ++D ++
Sbjct: 66 ------GCCAEIVHFERLKDDRMKMLAL-GQQRFRLLEYVREKPYRVGLVEWIED--EST 116
Query: 161 PSDVSSKVLSVKEAVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSL 220
D+ V E +++ V S + ++ L D +PSL
Sbjct: 117 DEDLRPMAKEV------------------ETLLKDVVRLSAKLTNQKIELPDD---LPSL 155
Query: 221 AERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAI 280
+S+ + G V +Q++L +++++T +RL E + + + LAA+ A+
Sbjct: 156 PRELSYWVASNLYG------VAAEQQEL--LEMKNTLRRLTREQEILMSTRNHLAARTAL 207
Query: 281 Q 281
+
Sbjct: 208 K 208
>gi|159185864|ref|NP_356921.2| ATP-dependent protease LA 2 [Agrobacterium fabrum str. C58]
gi|159140998|gb|AAK89706.2| ATP-dependent protease LA 2 [Agrobacterium fabrum str. C58]
Length = 215
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 44 VVPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEAS 103
VP+ P +L+P L+++E RYLA+++ AL +L + V + + E E
Sbjct: 9 TVPVFPLP-GALLLPEGHLPLNIFEPRYLAMIDTALASHRL-IGMVQPALHVIEAGIEGG 66
Query: 104 FAARCGCLVLIENV-ERLDIGALVSIRGVGRVKIVK 138
+ GCL I + E D ++S+ GV R ++++
Sbjct: 67 PLSAVGCLGRITSFSETGDGRYVISLTGVCRFRLLE 102
>gi|386828703|ref|ZP_10115810.1| ABC-type cobalt transport system, ATPase component [Beggiatoa alba
B18LD]
gi|386429587|gb|EIJ43415.1| ABC-type cobalt transport system, ATPase component [Beggiatoa alba
B18LD]
Length = 230
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 213 DEAFIPSLAERVSFAAFQPVSGSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSIS 272
D+ F P++AE V+F F G T E+ ++ +E L + L D +R+ L E +
Sbjct: 92 DQLFCPTVAEDVAFGLFN--LGKTAREVTQITRETLALLGLSDYAERVTYHLSGGEKRLV 149
Query: 273 MLAAKLAIQ 281
LA LA+Q
Sbjct: 150 ALATVLAMQ 158
>gi|162457585|ref|YP_001619952.1| ATP-dependent protease [Sorangium cellulosum So ce56]
gi|161168167|emb|CAN99472.1| putative ATP-dependent protease [Sorangium cellulosum So ce56]
Length = 221
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 55 VLVPSESKILHLYEARYLALLEEAL-VRKKLFVYFVLDPISISEYATEASFAARCGCLVL 113
VL P LH++E RY AL+ +AL + L V + DP ++ + A A G +
Sbjct: 27 VLFPGALLPLHIFEPRYRALVRDALGTHRILSVVLITDPRALDAHGHPA-IAQVAGAGEI 85
Query: 114 IENVERLDIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKVLSVKE 173
I++ E + +RG RV++ + P+ ++D P+ + ++S
Sbjct: 86 IDHAELPGGRYNIMLRGRARVRLAERPFVPPYRTAAATLLEDEPGEVPAQDHAALISTAA 145
Query: 174 AVYSL-----NSLEIKLKAPKEA 191
+ +L ++ E +L P++A
Sbjct: 146 SFAALVRDRDSNFEFRL--PRDA 166
>gi|254414634|ref|ZP_05028399.1| ATP-dependent protease La (LON) domain subfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196178482|gb|EDX73481.1| ATP-dependent protease La (LON) domain subfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 200
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 55 VLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASFAARCGCLVLI 114
VL P LH++E RY L+ L + F + DP+ A GC I
Sbjct: 8 VLFPGRPLPLHIFEFRYRILMNTILESDRRFGVLMWDPVQ--------GQPAAVGCCAEI 59
Query: 115 ENVERL-DIGALVSIRGVGRVKIVKFFQADPFLKGEVIPMQDTTSASPSDVSSKVLSVKE 173
+ +RL D V G R +++++ + P+ G V ++D S D+ SV++
Sbjct: 60 IHFQRLPDDRMKVLTLGQQRFRVLEYVREKPYRVGLVEWIEDQPSQ--KDLKEISTSVEQ 117
Query: 174 AVYSLNSLEIKLKAPKEAVMQTYVLNSLQWAEKQPSLDCDEAFIPSLAERVSFAAFQPVS 233
+ + L KL K ++ E P L + ++ V+
Sbjct: 118 LLRDVVHLSAKLTDQK-----------IELPEDLPDLPLELSYW--------------VA 152
Query: 234 GSTQSELVKLQQEKLKAMDLRDTKQRLNNSLEFVEGSISMLAAKLAIQ 281
G+ L + E+ ++++DT RL E + + + LAA+ ++
Sbjct: 153 GN----LYGVASEQQALLEMQDTAARLEREAEILTSTRNHLAARTVLK 196
>gi|375149733|ref|YP_005012174.1| peptidase S16 lon domain-containing protein [Niastella koreensis
GR20-10]
gi|361063779|gb|AEW02771.1| peptidase S16 lon domain protein [Niastella koreensis GR20-10]
Length = 213
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 12/150 (8%)
Query: 45 VPLLPFNINEVLVPSESKILHLYEARYLALLEEALVRKKLFVYFVLDPISISEYATEASF 104
+P+ P NI V+ P E LH++E RY L+ E KK F P ++ E
Sbjct: 5 IPIFPLNI--VVFPGEKVHLHVFEPRYKQLINECFEAKKTFGI----PSVVNNRLQEMGT 58
Query: 105 AARCGCLVLIENVERLDIGALVSIRGVGRVKIVKFFQA--DPFLKGEVIPMQDTTSASPS 162
R +V +DI G+ ++++ + D G ++ + A
Sbjct: 59 LVRVNDIVQTYENGEMDI----KTEGLRIFRVLEVIKQVPDKLYSGAIVNYPENDDAGNR 114
Query: 163 DVSSKVLSVKEAVYSLNSLEIKLKAPKEAV 192
++ KV+ + ++ L ++ K P E +
Sbjct: 115 ELMQKVVKGVKEMHRLLNISKDFKKPDEEL 144
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,722,625,056
Number of Sequences: 23463169
Number of extensions: 135316238
Number of successful extensions: 373783
Number of sequences better than 100.0: 296
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 373615
Number of HSP's gapped (non-prelim): 317
length of query: 286
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 145
effective length of database: 9,050,888,538
effective search space: 1312378838010
effective search space used: 1312378838010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)