Query 023184
Match_columns 286
No_of_seqs 197 out of 1632
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 09:04:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023184.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023184hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00184 aquaporin NIP1; Provi 100.0 4.1E-55 9E-60 396.7 23.2 239 46-286 49-294 (296)
2 KOG0223 Aquaporin (major intri 100.0 1.4E-51 3.1E-56 361.3 19.6 221 44-267 4-228 (238)
3 PLN00182 putative aquaporin NI 100.0 2.4E-50 5.1E-55 363.5 23.4 225 48-274 39-263 (283)
4 PLN00026 aquaporin NIP; Provi 100.0 1.1E-48 2.3E-53 354.1 20.9 230 47-279 67-296 (298)
5 PTZ00016 aquaglyceroporin; Pro 100.0 1.1E-46 2.4E-51 342.4 23.0 219 48-268 47-293 (294)
6 COG0580 GlpF Glycerol uptake f 100.0 8.6E-47 1.9E-51 330.2 18.9 215 49-265 3-240 (241)
7 KOG0224 Aquaporin (major intri 100.0 3.1E-47 6.6E-52 336.4 12.8 222 46-270 27-280 (316)
8 PRK05420 aquaporin Z; Provisio 100.0 1.4E-45 3E-50 325.2 22.3 213 51-266 2-229 (231)
9 PLN00027 aquaporin TIP; Provis 100.0 9.3E-46 2E-50 330.3 20.2 219 48-268 17-242 (252)
10 PLN00166 aquaporin TIP2; Provi 100.0 1.4E-45 3.1E-50 328.2 20.9 217 47-265 14-237 (250)
11 PLN00183 putative aquaporin NI 100.0 1.5E-45 3.3E-50 331.1 20.1 221 46-269 40-260 (274)
12 PLN00167 aquaporin TIP5; Provi 100.0 5.9E-45 1.3E-49 325.1 23.3 220 46-267 17-242 (256)
13 PF00230 MIP: Major intrinsic 100.0 1.1E-45 2.5E-50 325.7 14.8 213 46-260 3-227 (227)
14 cd00333 MIP Major intrinsic pr 100.0 5.8E-42 1.3E-46 302.4 18.0 210 52-263 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 1.5E-39 3.3E-44 284.8 16.0 203 56-260 1-216 (216)
16 PLN00182 putative aquaporin NI 99.6 2.4E-15 5.3E-20 136.1 9.8 98 49-152 157-254 (283)
17 PLN00183 putative aquaporin NI 99.6 2.9E-15 6.3E-20 135.1 9.8 111 50-166 160-270 (274)
18 cd00333 MIP Major intrinsic pr 99.6 7.1E-15 1.5E-19 129.8 9.8 99 48-149 127-227 (228)
19 PLN00026 aquaporin NIP; Provi 99.6 6.8E-15 1.5E-19 133.8 9.6 98 49-152 185-282 (298)
20 PLN00184 aquaporin NIP1; Provi 99.6 5.7E-15 1.2E-19 134.5 7.4 99 166-266 52-156 (296)
21 TIGR00861 MIP MIP family chann 99.5 5.6E-14 1.2E-18 123.1 8.5 96 48-146 119-215 (216)
22 KOG0223 Aquaporin (major intri 99.5 5.5E-14 1.2E-18 123.9 7.5 100 48-154 129-228 (238)
23 PLN00166 aquaporin TIP2; Provi 99.5 8.1E-14 1.8E-18 124.4 6.2 98 166-265 16-124 (250)
24 PLN00167 aquaporin TIP5; Provi 99.4 1.9E-13 4.2E-18 122.3 7.3 99 166-266 20-129 (256)
25 PLN00027 aquaporin TIP; Provis 99.4 4.6E-13 1E-17 119.9 7.2 98 166-265 18-126 (252)
26 PTZ00016 aquaglyceroporin; Pro 99.4 3.5E-13 7.6E-18 123.0 6.0 99 166-266 48-152 (294)
27 PRK05420 aquaporin Z; Provisio 99.3 8.4E-12 1.8E-16 110.4 10.7 99 49-153 130-229 (231)
28 KOG0224 Aquaporin (major intri 99.3 3.2E-12 6.9E-17 114.2 5.0 99 166-266 30-135 (316)
29 COG0580 GlpF Glycerol uptake f 99.3 6.9E-12 1.5E-16 110.4 5.6 104 167-272 4-116 (241)
30 PF00230 MIP: Major intrinsic 99.2 1.1E-10 2.4E-15 102.8 8.3 96 48-147 132-227 (227)
31 COG2116 FocA Formate/nitrite f 93.2 0.94 2E-05 40.9 9.9 179 83-269 63-262 (265)
32 PRK10805 formate transporter; 93.1 2.1 4.6E-05 39.1 12.3 97 87-187 71-181 (285)
33 PRK11562 nitrite transporter N 89.5 3.4 7.4E-05 37.4 9.8 98 88-188 62-171 (268)
34 PRK09713 focB putative formate 80.0 26 0.00057 32.0 10.9 98 87-188 70-181 (282)
35 TIGR00790 fnt formate/nitrite 77.3 19 0.0004 32.0 8.9 98 88-187 47-157 (239)
36 PF04632 FUSC: Fusaric acid re 71.5 30 0.00065 34.9 9.9 139 96-268 353-494 (650)
37 PF01226 Form_Nir_trans: Forma 43.9 2.4E+02 0.0051 25.2 10.6 101 86-188 59-171 (250)
38 PRK10631 p-hydroxybenzoic acid 37.4 4.8E+02 0.01 26.9 12.3 45 108-152 381-425 (652)
39 PRK12446 undecaprenyldiphospho 35.4 8.4 0.00018 36.1 -1.1 22 101-122 6-27 (352)
40 PF03033 Glyco_transf_28: Glyc 32.4 12 0.00025 29.4 -0.7 21 103-123 5-25 (139)
41 PF01384 PHO4: Phosphate trans 31.0 4.4E+02 0.0094 24.5 10.0 22 245-266 126-147 (326)
42 COG1289 Predicted membrane pro 24.8 2.9E+02 0.0063 28.3 7.8 26 126-151 400-425 (674)
43 PF09512 ThiW: Thiamine-precur 24.6 1.8E+02 0.0038 24.0 5.0 25 126-150 123-147 (150)
44 PRK15071 lipopolysaccharide AB 23.0 2.2E+02 0.0048 26.3 6.1 60 56-115 276-336 (356)
45 KOG1330 Sugar transporter/spin 21.6 78 0.0017 31.2 2.7 28 241-268 187-214 (493)
46 PRK15120 lipopolysaccharide AB 21.4 4.1E+02 0.0088 24.7 7.6 23 50-73 266-288 (366)
47 PF03739 YjgP_YjgQ: Predicted 21.0 3E+02 0.0064 25.2 6.5 23 239-261 331-353 (354)
48 KOG3030 Lipid phosphate phosph 20.7 2.6E+02 0.0057 26.0 5.9 47 221-267 210-265 (317)
49 PF13940 Ldr_toxin: Toxin Ldr, 20.5 1.2E+02 0.0026 18.4 2.3 22 243-264 11-32 (35)
No 1
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=4.1e-55 Score=396.66 Aligned_cols=239 Identities=73% Similarity=1.220 Sum_probs=211.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCC
Q 023184 46 FSVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFP 125 (286)
Q Consensus 46 ~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 125 (286)
.+.+++|++++||+|||+|+|++|+++..+...+....++.++++||+++++.+++++++||||+|||||+++++.|+++
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~ 128 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFP 128 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCC
Confidence 56789999999999999999999998765443332345677899999999999999999999999999999999999999
Q ss_pred CCcccchhhhhhhhHHHHHHHHHHHhccccc-------cccccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCCcCch
Q 023184 126 WKQVPPYILCQVLGSTLAAGTLRLLFQEKQD-------QFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGEL 198 (286)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~-------~~~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~~~~ 198 (286)
|.++++||++|++||++|+++++.+++.... ...++.|..+..++|+.|+++||+|+++++++..+++..+..
T Consensus 129 ~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~~~~ 208 (296)
T PLN00184 129 LKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIGEL 208 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCCCcc
Confidence 9999999999999999999999998853211 122345666888999999999999999999986666555567
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCCCcccccccccc
Q 023184 199 AGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSAS 278 (286)
Q Consensus 199 ~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~~~~~~~~ 278 (286)
.++.||+++.+.+++.+ ++||++|||||+|||+++.+.|+++||||++|++|+++|+++|+++..++.+.++++++.+
T Consensus 209 ~~l~IG~~v~~~~~~~g--~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~~~~~~~~~ 286 (296)
T PLN00184 209 AGLAIGSTVLLNVLIAA--PVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPLREITKSGS 286 (296)
T ss_pred hHHHHHHHHHHHHHHhc--ccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcchhhccchH
Confidence 89999999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCC
Q 023184 279 FLKGAGRS 286 (286)
Q Consensus 279 ~~~~~~~~ 286 (286)
|.|+.+++
T Consensus 287 ~~~~~~~~ 294 (296)
T PLN00184 287 FLKTVRIG 294 (296)
T ss_pred HHhhhccC
Confidence 99988763
No 2
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-51 Score=361.26 Aligned_cols=221 Identities=47% Similarity=0.736 Sum_probs=200.2
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcC
Q 023184 44 VYFSVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKR 123 (286)
Q Consensus 44 ~~~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~ 123 (286)
+..+.+.+|++++||++|++++|++|++...+...+...+.+.+++.+|+.+++.+++++++||||+|||||+++++.|+
T Consensus 4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~ 83 (238)
T KOG0223|consen 4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGK 83 (238)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCC
Confidence 34457899999999999999999999998766644445668889999999999999999999999999999999999999
Q ss_pred CCCCcccchhhhhhhhHHHHHHHHHHHhccc----cccccccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCCcCchh
Q 023184 124 FPWKQVPPYILCQVLGSTLAAGTLRLLFQEK----QDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELA 199 (286)
Q Consensus 124 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~----~~~~~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~~~~~ 199 (286)
+++.++..||++|++|++.|+++++.+.+.+ ........+..+..|+++.|++.||.|+++++.+..|+|+. .+.
T Consensus 84 isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~-~~a 162 (238)
T KOG0223|consen 84 ISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS-ELA 162 (238)
T ss_pred CcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc-ccH
Confidence 9999999999999999999999999998764 11222345566899999999999999999999977887765 889
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCC
Q 023184 200 GLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTD 267 (286)
Q Consensus 200 ~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 267 (286)
++.||+++.+.+++++ ++||++|||||+|||+++.+.|+++||||+||++|+++|+++|++++.++
T Consensus 163 ~l~IG~~v~~~~l~~g--~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 163 PLAIGFSVGLNILAAG--PFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHHHHHHHHHHHHeec--CcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999 99999999999999999999999999999999999999999999998776
No 3
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=2.4e-50 Score=363.48 Aligned_cols=225 Identities=62% Similarity=1.071 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
.+++|++++||+|||+|+|+++++.......+.......++++||+++++.+++++++||||+|||||+++++.|+++|.
T Consensus 39 ~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~ 118 (283)
T PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWY 118 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHH
Confidence 46889999999999999999999876433222223456678899999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhccccccccccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCCcCchhHHHHHHHH
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTV 207 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~~~~~~~~ig~~v 207 (286)
+++.||++|++|+++|+++++.+++.......++.|..+..++++.|+++|++|+++++....+++..+...++.+|+++
T Consensus 119 ~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~~~~~l~iGl~V 198 (283)
T PLN00182 119 QVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGELAGIAVGMTI 198 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccCCcchhHHHHHHH
Confidence 99999999999999999999998864444455677777888999999999999999999875555544456799999999
Q ss_pred HHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCCCcccccc
Q 023184 208 LLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREIT 274 (286)
Q Consensus 208 ~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~~~~ 274 (286)
.+.+++.+ ++||+++||||+|||+++.+.|.++|+||++|++|+++|+++|+++..++.+..+..
T Consensus 199 ~~~~~~~g--~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~~~~~~~~~~ 263 (283)
T PLN00182 199 ILNVFVAG--PISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRFTDKPLRELT 263 (283)
T ss_pred HHHHHHcc--ccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhccCCcccccc
Confidence 99999999 999999999999999999999999999999999999999999999985444433333
No 4
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.1e-48 Score=354.09 Aligned_cols=230 Identities=49% Similarity=0.778 Sum_probs=195.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCC
Q 023184 47 SVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPW 126 (286)
Q Consensus 47 ~~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 126 (286)
..+++|++++||+|||+|+|+++++...+...+....+..+++++|+++++.+++++++||||+|||||+++++.++++|
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~ 146 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPW 146 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcH
Confidence 45789999999999999999999765543322222346667899999999999999999999999999999999999999
Q ss_pred CcccchhhhhhhhHHHHHHHHHHHhccccccccccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCCcCchhHHHHHHH
Q 023184 127 KQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGST 206 (286)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~~~~~~~~ig~~ 206 (286)
.++++||++|++|+++|+++++.++++... ...+.|..+..++++.|+++||+|+++++++..+++..+...++.||++
T Consensus 147 ~~~~~YiiaQilGAi~aa~~~~~~~~~~~~-~g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~~~~~l~iGl~ 225 (298)
T PLN00026 147 KHVPAYIAAQVSASICASFALKGVFHPFMS-GGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGAT 225 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccc-CceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCCcCCccchHHHHH
Confidence 999999999999999999999998864221 1125667788899999999999999999987656554455678999999
Q ss_pred HHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCCCccccccccccc
Q 023184 207 VLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASF 279 (286)
Q Consensus 207 v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~~~~~~~~~ 279 (286)
+++.+++.+ ++||++|||||+|||+++.++|+++|+||++|++|+++|+++|+++..++++....++..+|
T Consensus 226 V~~~~l~~g--~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~~~~~~~~~~ 296 (298)
T PLN00026 226 VMLNILVAG--PSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPPRPVRSF 296 (298)
T ss_pred HHHHHHHhc--ccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccccccChhhhhhc
Confidence 999999999 99999999999999999999999999999999999999999999997666555444444444
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=1.1e-46 Score=342.41 Aligned_cols=219 Identities=32% Similarity=0.497 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
++++|++++||+|||+|+|+++++......++...+...++++||+++.+.+++++++||||+|||||+++++.|+++|.
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~ 126 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWK 126 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHH
Confidence 57889999999999999999998865433222223456789999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhccccc-----------------cccccCCCCCchhhHHHHHHHHHHHHHHHHhhcc
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQEKQD-----------------QFAGTLPAGSNIQAFVMEFIITFYLMFVISGVAT 190 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~-----------------~~~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~ 190 (286)
+++.||++|++||++|+++++.++++... ....+.|..+..++|+.|+++||+|+++++.+.+
T Consensus 127 ~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d 206 (294)
T PTZ00016 127 KLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITD 206 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998764211 1123455557789999999999999999999754
Q ss_pred CCCCc-CchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhh------cCCC----ceeeeeecchHHHHHHHHH
Q 023184 191 DNRAI-GELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVS------SQYK----GLWIYIVAPPLGATAGAWV 259 (286)
Q Consensus 191 ~~~~~-~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~------~~~~----~~wvy~v~p~~Ga~~a~~~ 259 (286)
+++.. ....|+.||+++.+..+..+ +.||++|||||+|||+++. ..|+ ++||||+||++|+++|+++
T Consensus 207 ~~~~~~~~~~pl~IGl~v~~i~~~~g--~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aall 284 (294)
T PTZ00016 207 PNNCPAFNYLPVAVGLLVFVIGISFG--GNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFL 284 (294)
T ss_pred CccCCCcCcccHHHHHHHHHHHHhcc--CCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHH
Confidence 43322 34679999999999888888 9999999999999999986 2454 6899999999999999999
Q ss_pred HHHHhcCCC
Q 023184 260 YNMVRYTDK 268 (286)
Q Consensus 260 ~~~~~~~~~ 268 (286)
|+++..++.
T Consensus 285 y~~ll~~~~ 293 (294)
T PTZ00016 285 YDKFIPPLI 293 (294)
T ss_pred HHHHhCCCC
Confidence 999986543
No 6
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.6e-47 Score=330.16 Aligned_cols=215 Identities=42% Similarity=0.663 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccc---CCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCC
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNL---NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFP 125 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~---~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 125 (286)
++.+++++||+||++|+++|+++..... .++....+..++++||+++.+.+|+++++||||+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 4678899999999999999999876543 2234567778999999999999999999999999999999999999999
Q ss_pred CCcccchhhhhhhhHHHHHHHHHHHhcccccc----------ccccCCCC-CchhhHHHHHHHHHHHHHHHHhhccCCCC
Q 023184 126 WKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQ----------FAGTLPAG-SNIQAFVMEFIITFYLMFVISGVATDNRA 194 (286)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~----------~~~~~p~~-~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~ 194 (286)
|++++.||++|++||++|+.+++.++...... ..++.|.. +..++|+.|+++||+|+++++++.++++.
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~ 162 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 99999999999999999999999988643222 22356653 67889999999999999999998766655
Q ss_pred cCchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc---------CCCceeeeeecchHHHHHHHHHHHHHhc
Q 023184 195 IGELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS---------QYKGLWIYIVAPPLGATAGAWVYNMVRY 265 (286)
Q Consensus 195 ~~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~---------~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 265 (286)
+....|+.||+.+++..++.+ +.||.++|||||+||++... ++.|.|+||++|++|+++|+++|+.++.
T Consensus 163 ~~~~apl~iGllv~~i~~s~g--~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 163 NAGFAPLAIGLLVTAIGLSLG--PTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred cccchHHHHHHHHHHHHHHhc--CCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 335899999999999999999 99999999999999999652 2358999999999999999999998763
No 7
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-47 Score=336.39 Aligned_cols=222 Identities=34% Similarity=0.576 Sum_probs=192.2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhhhhhcccCC-CCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCC
Q 023184 46 FSVPFMQKLMAEILGTYFMIFAGCASVVVNLNN-EKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRF 124 (286)
Q Consensus 46 ~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~-~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~ 124 (286)
.++++.|++++||+||++|+++|++++.+...+ +...++..+.++||+++++.+++.+++||||+|||||+++++.|++
T Consensus 27 i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~ 106 (316)
T KOG0224|consen 27 IRNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRL 106 (316)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCC
Confidence 357899999999999999999999998765433 4456677889999999999999999999999999999999999999
Q ss_pred CCCcccchhhhhhhhHHHHHHHHHHHhcccccc----------------ccccCCCC--CchhhHHHHHHHHHHHHHHHH
Q 023184 125 PWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQ----------------FAGTLPAG--SNIQAFVMEFIITFYLMFVIS 186 (286)
Q Consensus 125 ~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~----------------~~~~~p~~--~~~~~~~~E~~~Tf~l~~~v~ 186 (286)
+|+++++|+++|++||++|++.+|.+|.+.... .++|.|.. +.+++|+.|+++|.+|+.+++
T Consensus 107 p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~ 186 (316)
T KOG0224|consen 107 PWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLF 186 (316)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhhee
Confidence 999999999999999999999999988643222 22245543 889999999999999999999
Q ss_pred hhccCCCC--cCchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc-----------CCCceeeeeecchHHH
Q 023184 187 GVATDNRA--IGELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS-----------QYKGLWIYIVAPPLGA 253 (286)
Q Consensus 187 ~~~~~~~~--~~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~-----------~~~~~wvy~v~p~~Ga 253 (286)
++. |+|+ ...+.|+.+|+.+.++.+..| ..+|..+|||||||||++.. +..++|+.|++|++|+
T Consensus 187 aI~-D~rN~~p~g~~p~~iG~lv~~Ig~s~G--~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Ga 263 (316)
T KOG0224|consen 187 AIT-DKRNPIPTGLHPLVIGILVVAIGMSLG--YNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGA 263 (316)
T ss_pred EEe-cCCCCCCcchhHHHHHHHHHHHHHHhh--cccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhh
Confidence 984 5554 245789999999999999999 89999999999999999952 1257899999999999
Q ss_pred HHHHHHHHHHhcCCCcc
Q 023184 254 TAGAWVYNMVRYTDKPL 270 (286)
Q Consensus 254 ~~a~~~~~~~~~~~~~~ 270 (286)
++++++|.+++..|.|+
T Consensus 264 i~G~~iY~~~Ig~h~~~ 280 (316)
T KOG0224|consen 264 ILGGWIYDFFIGFHIPR 280 (316)
T ss_pred hhhhhhheeeeeccCCC
Confidence 99999999998887763
No 8
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=1.4e-45 Score=325.24 Aligned_cols=213 Identities=37% Similarity=0.692 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhccc-CCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCcc
Q 023184 51 MQKLMAEILGTYFMIFAGCASVVVNL-NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQV 129 (286)
Q Consensus 51 ~~~~i~EfigTf~lv~~~~~~~~~~~-~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 129 (286)
+|++++||+||++|+++++++..... .++.......+++++|+++.+.+++++++||+|+|||||+++++.|+++|.++
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 68999999999999999999765422 12222345667999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhHHHHHHHHHHHhccccc-c-----c-----cccCCCC-CchhhHHHHHHHHHHHHHHHHhhccCCCCcCc
Q 023184 130 PPYILCQVLGSTLAAGTLRLLFQEKQD-Q-----F-----AGTLPAG-SNIQAFVMEFIITFYLMFVISGVATDNRAIGE 197 (286)
Q Consensus 130 ~~yi~aQ~lGa~~g~~l~~~~~~~~~~-~-----~-----~~~~p~~-~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~~~ 197 (286)
+.||++|++||++|+++++.+++.+.. . . ..+.|.. +..++++.|+++|++|+++++... |+++...
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~-~~~~~~~ 160 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGAT-DKRAPAG 160 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHh-CCCCCCc
Confidence 999999999999999999988754211 0 0 0113322 667899999999999999999875 4444455
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCC--CceeeeeecchHHHHHHHHHHHHHhcC
Q 023184 198 LAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQY--KGLWIYIVAPPLGATAGAWVYNMVRYT 266 (286)
Q Consensus 198 ~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~--~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 266 (286)
..|+.+|+.+.+..++.+ ++||++|||||+|||+++.++| +++|+||++|++|+++++++|++++..
T Consensus 161 ~~p~~iGl~v~~~~~~~~--~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 161 FAPIAIGLALTLIHLISI--PVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred chHHHHHHHHHHHHHHhh--ccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 789999999999999999 9999999999999999998766 589999999999999999999998743
No 9
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=9.3e-46 Score=330.31 Aligned_cols=219 Identities=28% Similarity=0.411 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcc---cCCC--CccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhc
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVN---LNNE--KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCK 122 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~---~~~~--~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g 122 (286)
...+|++++||+|||+|+++++++.+.. ...+ .....+..++++|+++.+.+++++++||+|+|||||+++++.|
T Consensus 17 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g 96 (252)
T PLN00027 17 PDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGG 96 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhC
Confidence 5688999999999999999999886421 1111 1234556899999999999999999999999999999999999
Q ss_pred CCCCCcccchhhhhhhhHHHHHHHHHHHhccccccccccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCCc--CchhH
Q 023184 123 RFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI--GELAG 200 (286)
Q Consensus 123 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~--~~~~~ 200 (286)
+++|.++++||++|++||++|+.+++.+.++......++.|..+..++++.|+++||+|+++++.+..|+++. ....+
T Consensus 97 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~~p 176 (252)
T PLN00027 97 NITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGIIAP 176 (252)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccchHH
Confidence 9999999999999999999999999887754333344456667888999999999999999999876554432 34789
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCCC
Q 023184 201 LAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 268 (286)
Q Consensus 201 ~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 268 (286)
+.+|+.+...++..+ ++||++|||||+|||+++.++|+++|+||+||++|+++++++|++++.+++
T Consensus 177 ~~iGl~v~~~~~~~g--~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~ 242 (252)
T PLN00027 177 IAIGFIVGANILAGG--AFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGST 242 (252)
T ss_pred HHHHHHHHHHHHhcc--cccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999888 999999999999999999999999999999999999999999999985433
No 10
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.4e-45 Score=328.16 Aligned_cols=217 Identities=31% Similarity=0.503 Sum_probs=185.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhhhcc-c-CCC---CccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHh
Q 023184 47 SVPFMQKLMAEILGTYFMIFAGCASVVVN-L-NNE---KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATC 121 (286)
Q Consensus 47 ~~~l~~~~i~EfigTf~lv~~~~~~~~~~-~-~~~---~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~ 121 (286)
+.+.+|++++||+|||+|+++++++.... . .++ .......+++++|+.+++.+++++++||+|+|||||+++++.
T Consensus 14 ~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~ 93 (250)
T PLN00166 14 SVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIG 93 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHh
Confidence 35678999999999999999999986541 1 111 122455688999999999999999999999999999999999
Q ss_pred cCCCCCcccchhhhhhhhHHHHHHHHHHHhccccccccccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCCc--Cchh
Q 023184 122 KRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI--GELA 199 (286)
Q Consensus 122 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~--~~~~ 199 (286)
|+++|.++++||++|++|+++|+.+++.+++++.....+..+..+..++++.|+++||+|+++++.+..++++. ....
T Consensus 94 g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~~~ 173 (250)
T PLN00166 94 GNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIA 173 (250)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccccch
Confidence 99999999999999999999999999988754322222334455778999999999999999999876555432 3478
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhc
Q 023184 200 GLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRY 265 (286)
Q Consensus 200 ~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 265 (286)
|+.||+++.+.++..+ ++||++|||||+|||+++.++|+++|+||++|++|+++|+++|+.++.
T Consensus 174 p~~iGl~v~~~~~~~~--~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~ 237 (250)
T PLN00166 174 PIAIGFIVGANILAAG--PFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFI 237 (250)
T ss_pred hHHHHHHHHHHHHccc--CCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999 999999999999999999999999999999999999999999998854
No 11
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=1.5e-45 Score=331.13 Aligned_cols=221 Identities=41% Similarity=0.729 Sum_probs=190.6
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCC
Q 023184 46 FSVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFP 125 (286)
Q Consensus 46 ~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 125 (286)
++.+.+|++++||+|||+++|+++++.......+...++..+++++|+++.+.+++++++||||+|||||+++++.|+++
T Consensus 40 ~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~ 119 (274)
T PLN00183 40 MDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFP 119 (274)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCC
Confidence 34678899999999999999999987654333222234556789999999999999999999999999999999999999
Q ss_pred CCcccchhhhhhhhHHHHHHHHHHHhccccccccccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCCcCchhHHHHHH
Q 023184 126 WKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGS 205 (286)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~~~~~~~~ig~ 205 (286)
|.++++||++|++|+++|+++++.+++... ....+.|..+..++++.|+++|++|+++++.+..+++..+...++.+|+
T Consensus 120 ~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~~~~~l~iGl 198 (274)
T PLN00183 120 WSKVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGFVIGI 198 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCCCceehHHHH
Confidence 999999999999999999999988886432 2344556667788999999999999999998765544444567899999
Q ss_pred HHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCCCc
Q 023184 206 TVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 269 (286)
Q Consensus 206 ~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~ 269 (286)
++++.+++.+ ++||+++||||+|+|+++..+|+++|+||++|++|+++|+++|++++.+..+
T Consensus 199 ~v~~~v~~~g--~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~ 260 (274)
T PLN00183 199 AIGLAVLITG--PVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQP 260 (274)
T ss_pred HHHHHHHhcc--CCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999 9999999999999999999999999999999999999999999999866544
No 12
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=5.9e-45 Score=325.06 Aligned_cols=220 Identities=27% Similarity=0.421 Sum_probs=184.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhhhhhcccC--CC---CccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHH
Q 023184 46 FSVPFMQKLMAEILGTYFMIFAGCASVVVNLN--NE---KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHAT 120 (286)
Q Consensus 46 ~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~~--~~---~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l 120 (286)
...+++|++++||+|||+|+++++++...... ++ ...++..++++||+++.+.+++++++||+|+|||||+++++
T Consensus 17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV 96 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 34578999999999999999999998764321 11 12346678999999999999999999999999999999999
Q ss_pred hcCCCCCcccchhhhhhhhHHHHHHHHHHHhccccccccccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCC-cCchh
Q 023184 121 CKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELA 199 (286)
Q Consensus 121 ~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~-~~~~~ 199 (286)
.|+++|.+++.||++|++|+++|+++++.++++.........+..+..++++.|+++|++|+++++...++++. .+...
T Consensus 97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~~~ 176 (256)
T PLN00167 97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGAIG 176 (256)
T ss_pred hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCcc
Confidence 99999999999999999999999999988775422111111223366789999999999999999987543332 23467
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCC
Q 023184 200 GLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTD 267 (286)
Q Consensus 200 ~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 267 (286)
|+.+|+++.+..+..+ ++||+++||||+|||+++.+.|+++|+||+||++|+++++++|++++.+.
T Consensus 177 pl~iGl~v~~~~~~~g--~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~ 242 (256)
T PLN00167 177 PLAIGLVAGANVLAAG--PFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPT 242 (256)
T ss_pred hHHHHHHHHHHHHhcc--CCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999 99999999999999999999999999999999999999999999998543
No 13
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.1e-45 Score=325.74 Aligned_cols=213 Identities=42% Similarity=0.675 Sum_probs=181.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhhhhhc-ccCCCC-----ccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHH
Q 023184 46 FSVPFMQKLMAEILGTYFMIFAGCASVVV-NLNNEK-----IVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHA 119 (286)
Q Consensus 46 ~~~~l~~~~i~EfigTf~lv~~~~~~~~~-~~~~~~-----~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~ 119 (286)
.+.+++|++++||+||++++|+++++... .....+ ......+++++|+++++.+++++++||||+|||||++.+
T Consensus 3 ~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~ 82 (227)
T PF00230_consen 3 KSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFA 82 (227)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhhee
Confidence 35689999999999999999999886542 222111 124566889999999999999999999999999999999
Q ss_pred HhcCCCCCcccchhhhhhhhHHHHHHHHHHHhccc--cccccc--cCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCCc
Q 023184 120 TCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK--QDQFAG--TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI 195 (286)
Q Consensus 120 l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~--~~~~~~--~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~ 195 (286)
+.|+++|.+++.|+++|++|+++|+++++.++++. ...... +.|..+..++++.|+++|++|+++++...++++..
T Consensus 83 l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~ 162 (227)
T PF00230_consen 83 LTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKF 162 (227)
T ss_dssp HTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSS
T ss_pred eeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccccc
Confidence 99999999999999999999999999999999763 122222 34456889999999999999999999987666543
Q ss_pred C--chhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHH
Q 023184 196 G--ELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVY 260 (286)
Q Consensus 196 ~--~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~ 260 (286)
. ...|+.||+++.+..+..+ +.||+++||||+|||+++...|+++|+||++|++|+++|+++|
T Consensus 163 ~~~~~~p~~ig~~v~~~~~~~~--~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 163 PLGPLAPLAIGLTVGALVLAGG--PYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp TSSGGHHHHHHHHHHHHHHHHH--HHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccceeEEEEEeecccccc--cccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 3 4689999999999998888 8999999999999999999999999999999999999999987
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=5.8e-42 Score=302.43 Aligned_cols=210 Identities=47% Similarity=0.758 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCC-CccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCccc
Q 023184 52 QKLMAEILGTYFMIFAGCASVVVNLNNE-KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVP 130 (286)
Q Consensus 52 ~~~i~EfigTf~lv~~~~~~~~~~~~~~-~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 130 (286)
|++++||+|||++++.++++......++ ...++...+++||+.+.+.+++++++||+|+|||+|+++++.|+++|.+.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 5789999999999999999876544322 123455679999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhHHHHHHHHHHHhccccccc----------cccCC--CCCchhhHHHHHHHHHHHHHHHHhhccCCCC--cC
Q 023184 131 PYILCQVLGSTLAAGTLRLLFQEKQDQF----------AGTLP--AGSNIQAFVMEFIITFYLMFVISGVATDNRA--IG 196 (286)
Q Consensus 131 ~yi~aQ~lGa~~g~~l~~~~~~~~~~~~----------~~~~p--~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~--~~ 196 (286)
+||++|++|+++|+.+++.+++++.... .++.| ..+..++++.|+++|++|+++++....+++. ..
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~ 160 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPG 160 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCCC
Confidence 9999999999999999999886532211 11233 3377899999999999999999987654432 34
Q ss_pred chhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcC---CCceeeeeecchHHHHHHHHHHHHH
Q 023184 197 ELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQ---YKGLWIYIVAPPLGATAGAWVYNMV 263 (286)
Q Consensus 197 ~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~---~~~~wvy~v~p~~Ga~~a~~~~~~~ 263 (286)
...++.+|+.+.+.++..+ ++||+++||||+++++++.+. |+++|+||++|++|+++|+++|+++
T Consensus 161 ~~~~~~iGl~v~~~~~~~g--~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 161 GLAPLAIGLLVAAIGLAGG--PITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred CcHHHHHHHHHHHHHHHhh--cccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 4678999999999999998 999999999999999999975 9999999999999999999999864
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=1.5e-39 Score=284.80 Aligned_cols=203 Identities=41% Similarity=0.630 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHhhhhhhcccCC----CCc-cCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCccc
Q 023184 56 AEILGTYFMIFAGCASVVVNLNN----EKI-VSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVP 130 (286)
Q Consensus 56 ~EfigTf~lv~~~~~~~~~~~~~----~~~-~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 130 (286)
+||+||++|+++++++....... +.. .....++++||+.+.+.+++++++||+|+|||||+++++.++++|.+++
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999986642111 111 1455689999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhHHHHHHHHHHHhccccc---ccccc-CCCCCchhhHHHHHHHHHHHHHHHHhhccCCCC--cCchhHHHHH
Q 023184 131 PYILCQVLGSTLAAGTLRLLFQEKQD---QFAGT-LPAGSNIQAFVMEFIITFYLMFVISGVATDNRA--IGELAGLAVG 204 (286)
Q Consensus 131 ~yi~aQ~lGa~~g~~l~~~~~~~~~~---~~~~~-~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~--~~~~~~~~ig 204 (286)
.||++|++|+++|+.+++.++++... ..... .+..+..++++.|+++|++|+++++....++++ .....++.+|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG 160 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIG 160 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHH
Confidence 99999999999999999988865321 11111 223477899999999999999999987544322 2236899999
Q ss_pred HHHHHHHHHHhcCCCCccccchhhhHHHHHhhc--CCCceeeeeecchHHHHHHHHHH
Q 023184 205 STVLLNVMFAGYMPITGASMNPARSLGPAIVSS--QYKGLWIYIVAPPLGATAGAWVY 260 (286)
Q Consensus 205 ~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~--~~~~~wvy~v~p~~Ga~~a~~~~ 260 (286)
+.+.+.++..+ ++||+++||||+|+++++.+ +|+++|+||++|++|+++++++|
T Consensus 161 ~~v~~~~~~~g--~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 161 LLVFLIHLSMG--PYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHhCC--CCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 99999999999 99999999999999999987 89999999999999999999875
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.61 E-value=2.4e-15 Score=136.10 Aligned_cols=98 Identities=22% Similarity=0.297 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCc
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQ 128 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (286)
+.++.+++|+++|++|++++++....+...+ . ..++.+|+.+++.+++.+++||+|+|||+|+++++.++ .|.+
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~---~--~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~ 230 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSRAVG---E--LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKG 230 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccccCC---c--chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccc
Confidence 4678999999999999998887543322111 1 25788999999999999999999999999999999865 6889
Q ss_pred ccchhhhhhhhHHHHHHHHHHHhc
Q 023184 129 VPPYILCQVLGSTLAAGTLRLLFQ 152 (286)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~l~~~~~~ 152 (286)
+|+||++|++|+++|+++++.+..
T Consensus 231 ~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 231 IWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999888763
No 17
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.60 E-value=2.9e-15 Score=135.09 Aligned_cols=111 Identities=20% Similarity=0.281 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCcc
Q 023184 50 FMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQV 129 (286)
Q Consensus 50 l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 129 (286)
.++.++.|+++|+++++.+++....+.... . ..++.+|+.+.+.+++.+++||+|+|||+|+++++.+ .+|.+.
T Consensus 160 ~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~----~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~ 233 (274)
T PLN00183 160 CSSAFWVEFIATFIVMFLAASLTSQPQSLG----H-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDI 233 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeccccCCC----C-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhhe
Confidence 578999999999999998877644321111 1 1367899999999999999999999999999999987 589999
Q ss_pred cchhhhhhhhHHHHHHHHHHHhccccccccccCCCCC
Q 023184 130 PPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGS 166 (286)
Q Consensus 130 ~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~~ 166 (286)
|+||++|++|+++|+++++.++.+.........|+.+
T Consensus 234 wvy~vapilGailaa~l~~~l~~~~~~~~~~~~~~~~ 270 (274)
T PLN00183 234 WIYITAPTIGAVAGALMFHLLRLRTQPCSPNSSPNTS 270 (274)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCchh
Confidence 9999999999999999999988655544444555554
No 18
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.58 E-value=7.1e-15 Score=129.82 Aligned_cols=99 Identities=19% Similarity=0.265 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCC--C
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRF--P 125 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~--~ 125 (286)
.+.++.++.|+++|++|++.+++....+... ......++.+|+.+.+.+++.+++||+|+|||+++++.+.++. +
T Consensus 127 ~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~---~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~ 203 (228)
T cd00333 127 VSNGNAFFVEFIGTFILVLVVFATTDDPNGP---PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARH 203 (228)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccccccC---CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccc
Confidence 4588999999999999999888764322110 1223468889999999999999999999999999999999988 7
Q ss_pred CCcccchhhhhhhhHHHHHHHHHH
Q 023184 126 WKQVPPYILCQVLGSTLAAGTLRL 149 (286)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~l~~~ 149 (286)
|.+.|+||++|++|+++|+++++.
T Consensus 204 ~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 204 WHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred cceeehhhhHHHHHHHHHHHHHHh
Confidence 999999999999999999987653
No 19
>PLN00026 aquaporin NIP; Provisional
Probab=99.58 E-value=6.8e-15 Score=133.83 Aligned_cols=98 Identities=21% Similarity=0.259 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCc
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQ 128 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (286)
+.++.++.||++||+|++++++....+...+ . ..++++|+.+++.+++.++.||+|+|||+|+++++.++ +|.+
T Consensus 185 s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~---~--~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~~~~ 258 (298)
T PLN00026 185 STGQAFALEFIITFNLLFVVTAVATDTRAVG---E--LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-NYRA 258 (298)
T ss_pred cHHHHHHHHHHHHHHHHHhheeeecCCCCcC---C--ccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-Cchh
Confidence 5788999999999999998875432221111 1 14688999999999999999999999999999999876 8999
Q ss_pred ccchhhhhhhhHHHHHHHHHHHhc
Q 023184 129 VPPYILCQVLGSTLAAGTLRLLFQ 152 (286)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~l~~~~~~ 152 (286)
+|+||++|++||++|+++++.+..
T Consensus 259 ~wVy~vaPilGAilga~ly~~~~~ 282 (298)
T PLN00026 259 IWIYLVAPTLGALAGAGTYTAVKL 282 (298)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998777643
No 20
>PLN00184 aquaporin NIP1; Provisional
Probab=99.56 E-value=5.7e-15 Score=134.52 Aligned_cols=99 Identities=22% Similarity=0.335 Sum_probs=82.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhccCC--C-CcCch--hHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc-CC
Q 023184 166 SNIQAFVMEFIITFYLMFVISGVATDN--R-AIGEL--AGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS-QY 239 (286)
Q Consensus 166 ~~~~~~~~E~~~Tf~l~~~v~~~~~~~--~-~~~~~--~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~-~~ 239 (286)
+..+.++.|+++||+|++++++....+ + ..... .++.+|+++++.+++.+ ++||+++|||++|++++.+. .|
T Consensus 52 ~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g--~iSGaH~NPAVTla~al~g~~~~ 129 (296)
T PLN00184 52 PFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLG--HISGAHINPAVTIAFASCGRFPL 129 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhc--CCCccccCHHHHHHHHHhCCCCH
Confidence 467899999999999999988754211 1 11123 35666999999999999 99999999999999999876 79
Q ss_pred CceeeeeecchHHHHHHHHHHHHHhcC
Q 023184 240 KGLWIYIVAPPLGATAGAWVYNMVRYT 266 (286)
Q Consensus 240 ~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 266 (286)
...|+||++|++|+++|+++++.++..
T Consensus 130 ~~~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 130 KQVPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999998854
No 21
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.50 E-value=5.6e-14 Score=123.13 Aligned_cols=96 Identities=21% Similarity=0.271 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhc-CCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCK-RFPW 126 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g-~~~~ 126 (286)
.+.++.++.|+++|+++++..+.....+.... .....++.+|+.+...++..+++||+|+|||+++++.+.+ ..+|
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~---~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~ 195 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPRNRVP---RGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGW 195 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCCCCCC---CCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhccccc
Confidence 36889999999999999998887644321111 1113688899999999999999999999999999999976 5789
Q ss_pred CcccchhhhhhhhHHHHHHH
Q 023184 127 KQVPPYILCQVLGSTLAAGT 146 (286)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~l 146 (286)
.+.|+||++|++|+++|+.+
T Consensus 196 ~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 196 GNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred cceeHHHHHHHHHHHHHHHh
Confidence 99999999999999999865
No 22
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.49 E-value=5.5e-14 Score=123.88 Aligned_cols=100 Identities=25% Similarity=0.353 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
.+.+|.++.|++.||+|++..++.....+.+ ...++.+|+.+.+.+++.+++||+++|||+|+++++..+ .|.
T Consensus 129 ~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~-~w~ 201 (238)
T KOG0223|consen 129 LSTGQGLVIEIILTFILVFTVFATATDPRRS------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG-SWD 201 (238)
T ss_pred CCcchhHHHHHHHHHHHhheeEEEeecCCCc------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc-CCC
Confidence 4578899999999999999877643322222 336889999999999999999999999999999999987 499
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhccc
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQEK 154 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~~~ 154 (286)
.+|+||++|++|+++++++++.++..+
T Consensus 202 ~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 202 DHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred cEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 999999999999999999999888644
No 23
>PLN00166 aquaporin TIP2; Provisional
Probab=99.46 E-value=8.1e-14 Score=124.42 Aligned_cols=98 Identities=27% Similarity=0.396 Sum_probs=81.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhccC--C--C-C---cCc--hhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHh
Q 023184 166 SNIQAFVMEFIITFYLMFVISGVATD--N--R-A---IGE--LAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIV 235 (286)
Q Consensus 166 ~~~~~~~~E~~~Tf~l~~~v~~~~~~--~--~-~---~~~--~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~ 235 (286)
+..++++.|+++||+|+++.+....+ + + + ... ..++.+|+.+++.+++.+ +.||+++||||++++++.
T Consensus 16 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g--~iSGah~NPAvt~~~~l~ 93 (250)
T PLN00166 16 ASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAA--NISGGHLNPAVTLGLAIG 93 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHh--cccccccCHHHHHHHHHh
Confidence 55688999999999999998886432 1 1 1 111 246779999999999999 999999999999999997
Q ss_pred hc-CCCceeeeeecchHHHHHHHHHHHHHhc
Q 023184 236 SS-QYKGLWIYIVAPPLGATAGAWVYNMVRY 265 (286)
Q Consensus 236 ~~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 265 (286)
++ .|...|+||++|++|+++|+.+++.++.
T Consensus 94 g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~ 124 (250)
T PLN00166 94 GNITIITGFFYWIAQCLGSIVACLLLVFVTN 124 (250)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 54 5888899999999999999999998864
No 24
>PLN00167 aquaporin TIP5; Provisional
Probab=99.44 E-value=1.9e-13 Score=122.34 Aligned_cols=99 Identities=21% Similarity=0.358 Sum_probs=83.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhccCCC----C------cCchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHh
Q 023184 166 SNIQAFVMEFIITFYLMFVISGVATDNR----A------IGELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIV 235 (286)
Q Consensus 166 ~~~~~~~~E~~~Tf~l~~~v~~~~~~~~----~------~~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~ 235 (286)
+..+.++.|+++||+|+++.+....+++ + .....++.+|+++++.+++.+ ++||+++|||+++++.+.
T Consensus 20 ~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g--~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 20 NALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAA--NISGGHVNPAVTFGMAVG 97 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhh--cccccccCHHHHHHHHHh
Confidence 4668899999999999999887643221 0 012468999999999999999 999999999999999998
Q ss_pred hc-CCCceeeeeecchHHHHHHHHHHHHHhcC
Q 023184 236 SS-QYKGLWIYIVAPPLGATAGAWVYNMVRYT 266 (286)
Q Consensus 236 ~~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 266 (286)
+. .|...|+||++|++|+++|+++++.++..
T Consensus 98 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 98 GHISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 65 58899999999999999999999887643
No 25
>PLN00027 aquaporin TIP; Provisional
Probab=99.40 E-value=4.6e-13 Score=119.86 Aligned_cols=98 Identities=24% Similarity=0.346 Sum_probs=80.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhcc------CCCC--cCc--hhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHh
Q 023184 166 SNIQAFVMEFIITFYLMFVISGVAT------DNRA--IGE--LAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIV 235 (286)
Q Consensus 166 ~~~~~~~~E~~~Tf~l~~~v~~~~~------~~~~--~~~--~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~ 235 (286)
...+.++.|+++||+|+++.+.... +++. ... ..++.+|+++.+.+++.+ +.||+++|||+++++.+.
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~--~iSGah~NPAvtl~~~~~ 95 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGA--NISGGHVNPAVTFGAFIG 95 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHc--ccCccccChHHHHHHHHh
Confidence 3467899999999999998886521 1111 111 468999999999999999 999999999999999986
Q ss_pred hc-CCCceeeeeecchHHHHHHHHHHHHHhc
Q 023184 236 SS-QYKGLWIYIVAPPLGATAGAWVYNMVRY 265 (286)
Q Consensus 236 ~~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 265 (286)
++ .|...|+||++|++|+++|+++++++..
T Consensus 96 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 96 GNITLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 65 5788899999999999999999987753
No 26
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.39 E-value=3.5e-13 Score=122.98 Aligned_cols=99 Identities=32% Similarity=0.475 Sum_probs=82.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhccCCC--C-cC--chhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc-CC
Q 023184 166 SNIQAFVMEFIITFYLMFVISGVATDNR--A-IG--ELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS-QY 239 (286)
Q Consensus 166 ~~~~~~~~E~~~Tf~l~~~v~~~~~~~~--~-~~--~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~-~~ 239 (286)
...+.++.|+++||+|+++.+....+.. + .. ...++.+|+++.+.+++.+ +.||+++|||+++++++.+. .|
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g--~iSG~h~NPAVTla~~l~g~i~~ 125 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSA--GISGGHLNPAVTLGNAVFGKFPW 125 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhc--ccCcCccCHHHHHHHHHhccCCH
Confidence 3457899999999999998887543221 1 11 1356788999999999999 99999999999999999887 79
Q ss_pred CceeeeeecchHHHHHHHHHHHHHhcC
Q 023184 240 KGLWIYIVAPPLGATAGAWVYNMVRYT 266 (286)
Q Consensus 240 ~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 266 (286)
...|+||++|++|+++|+++.+.++++
T Consensus 126 ~~~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 126 KKLPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999998888755
No 27
>PRK05420 aquaporin Z; Provisional
Probab=99.33 E-value=8.4e-12 Score=110.37 Aligned_cols=99 Identities=15% Similarity=0.230 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcC-CCCC
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKR-FPWK 127 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~-~~~~ 127 (286)
+..+.++.|+++|++|++..+.....+ . . . ...++.+|+.+....+..++.||+.+|||+++++.+..+ ..+.
T Consensus 130 ~~~~~~~~E~v~T~iLv~~i~~~~~~~-~-~--~--~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~ 203 (231)
T PRK05420 130 SLLAALVCEVVLTAFFLLVILGATDKR-A-P--A--GFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALE 203 (231)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCC-C-C--C--cchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCcc
Confidence 578999999999999999877653211 1 1 1 125788899999999999999999999999999999753 3456
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhcc
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQE 153 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~~ 153 (286)
.+|+||++|++|+++++++++.++.+
T Consensus 204 ~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 204 QLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred ceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999998887654
No 28
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.28 E-value=3.2e-12 Score=114.19 Aligned_cols=99 Identities=30% Similarity=0.435 Sum_probs=81.3
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhcc----CCCCcCc--hhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc-C
Q 023184 166 SNIQAFVMEFIITFYLMFVISGVAT----DNRAIGE--LAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS-Q 238 (286)
Q Consensus 166 ~~~~~~~~E~~~Tf~l~~~v~~~~~----~~~~~~~--~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~-~ 238 (286)
...|.+++||++|++|++..++... .+...+. ...+.+|+++++.+++++ ..||+|+|||++|+..+++. .
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag--~iSGgHlNPAVS~a~~~~g~~p 107 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAG--RISGGHLNPAVSLAMCILGRLP 107 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhc--cccccccCHHHHHHHHHhcCCC
Confidence 4678899999999999987766432 1112222 235789999999999999 99999999999999999886 7
Q ss_pred CCceeeeeecchHHHHHHHHHHHHHhcC
Q 023184 239 YKGLWIYIVAPPLGATAGAWVYNMVRYT 266 (286)
Q Consensus 239 ~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 266 (286)
|..+.+|.++|++||++|+.....+|++
T Consensus 108 ~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d 135 (316)
T KOG0224|consen 108 WKKFPVYVLAQFIGAFLGAATVYGLYYD 135 (316)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998877666654
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.25 E-value=6.9e-12 Score=110.45 Aligned_cols=104 Identities=32% Similarity=0.407 Sum_probs=84.0
Q ss_pred chhhHHHHHHHHHHHHHHHHhhc----cCC---CCcC-chhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc-
Q 023184 167 NIQAFVMEFIITFYLMFVISGVA----TDN---RAIG-ELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS- 237 (286)
Q Consensus 167 ~~~~~~~E~~~Tf~l~~~v~~~~----~~~---~~~~-~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~- 237 (286)
..+.++.||++|++|++...+.. ..+ ...+ ....+.+|+.|.+.+++.+ +.||+|+|||.+++.++.+.
T Consensus 4 ~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g--~iSGaHlNPAVTi~la~~g~f 81 (241)
T COG0580 4 LTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFG--GISGAHLNPAVTIALAVRGRF 81 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhcc--CcCccccChHHHHHHHHhCCC
Confidence 34678999999999999755432 111 1112 2257899999999999999 99999999999999999886
Q ss_pred CCCceeeeeecchHHHHHHHHHHHHHhcCCCcccc
Q 023184 238 QYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLRE 272 (286)
Q Consensus 238 ~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~~ 272 (286)
+|+....||++|++|+++|+.+...+++.+..+.+
T Consensus 82 p~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 82 PWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 78999999999999999999888888877665544
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.15 E-value=1.1e-10 Score=102.83 Aligned_cols=96 Identities=23% Similarity=0.320 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
.+..+.++.|+++|++|++........++... .+. ..++.+|+.+.+..+..+..||+.+|||++++..+.... |.
T Consensus 132 ~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~--~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~ 207 (227)
T PF00230_consen 132 ISLGQAFFSEFIGTFILVLVILAVADDKRKFP--LGP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WD 207 (227)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTSTTSSST--SSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HT
T ss_pred chhhhhhhhhhhhhhHHHhhhhhhcccccccc--ccc-ccceeEEEEEeecccccccccccccCchhhcCceeeccc-CC
Confidence 35789999999999999997665543322221 111 257888999999999999999999999999999998765 89
Q ss_pred cccchhhhhhhhHHHHHHHH
Q 023184 128 QVPPYILCQVLGSTLAAGTL 147 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~ 147 (286)
..|+||++|++|+++|++++
T Consensus 208 ~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 208 YFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp TTTHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEehHHHHHHHHHhhC
Confidence 99999999999999999763
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=93.17 E-value=0.94 Score=40.87 Aligned_cols=179 Identities=16% Similarity=0.150 Sum_probs=89.6
Q ss_pred CchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhcccc-----cc
Q 023184 83 SLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQ-----DQ 157 (286)
Q Consensus 83 ~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~-----~~ 157 (286)
..+.-++.+++++.+.+++-+..=-+ |--........++++|.+.+--|+-=.+|=++|++++.+++.-.. +.
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~ 140 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANG 140 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 33445677777777776665544211 322233345568899988877666666666666665555442111 10
Q ss_pred ccc-----cC---CCCCchhhHHHHHHHHHHHHHHHHhhccCCCCcCchhHHHHHHHHHHHHHHHhcCCCCccccchhhh
Q 023184 158 FAG-----TL---PAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGYMPITGASMNPARS 229 (286)
Q Consensus 158 ~~~-----~~---p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~ 229 (286)
..+ .. -+.+..+.|.--.+|.++.++.++..-..+.. .-.-+.+-+.+++.+. . .+.=...|-..-
T Consensus 141 ~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~~--~~K~~~m~~pv~~Fv~--~--GfeH~VANm~~i 214 (265)
T COG2116 141 QWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKDG--AAKIFAIILPVMLFVA--S--GFEHSVANMFMI 214 (265)
T ss_pred hhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccch--hhHHHHHHHHHHHHHH--c--CCceeeehHHHH
Confidence 110 00 01245666777778888888877764222221 1223333344443332 2 233344553322
Q ss_pred HHHHHhhc--CCCc-e---ee-eeecchHH-HHHHHHHHHHHhcCCCc
Q 023184 230 LGPAIVSS--QYKG-L---WI-YIVAPPLG-ATAGAWVYNMVRYTDKP 269 (286)
Q Consensus 230 lg~~i~~~--~~~~-~---wv-y~v~p~~G-a~~a~~~~~~~~~~~~~ 269 (286)
.-.+...+ +|.+ . ++ -.+|.++| +++-++.|.+++.++.+
T Consensus 215 ~~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~~ 262 (265)
T COG2116 215 PWAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQNR 262 (265)
T ss_pred HHHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcccccc
Confidence 11222222 3433 1 22 23677766 55677888888755443
No 32
>PRK10805 formate transporter; Provisional
Probab=93.06 E-value=2.1 Score=39.10 Aligned_cols=97 Identities=13% Similarity=0.179 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCCCCChHhhHHHHHhcCCCCCccc----chhhhhhhhHHHHHHHHHHHhcc--cccccc
Q 023184 87 ISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVP----PYILCQVLGSTLAAGTLRLLFQE--KQDQFA 159 (286)
Q Consensus 87 ~al~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~----~yi~aQ~lGa~~g~~l~~~~~~~--~~~~~~ 159 (286)
.++.+.+++.+.++.-+.. +| |--.+++ .+.|+.++.+.+ +-+++-++|+++-+.+++..-.. ......
T Consensus 71 ~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~ 146 (285)
T PRK10805 71 GGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWG 146 (285)
T ss_pred HHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHH
Confidence 3555666666665554443 44 5555543 567888888776 34455666666655544321100 000000
Q ss_pred c-------cCCCCCchhhHHHHHHHHHHHHHHHHh
Q 023184 160 G-------TLPAGSNIQAFVMEFIITFYLMFVISG 187 (286)
Q Consensus 160 ~-------~~p~~~~~~~~~~E~~~Tf~l~~~v~~ 187 (286)
. .--+.+..+.|+--.+|.++..+.++.
T Consensus 147 ~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 147 LNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 001235667777778888888887774
No 33
>PRK11562 nitrite transporter NirC; Provisional
Probab=89.53 E-value=3.4 Score=37.43 Aligned_cols=98 Identities=9% Similarity=0.124 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHhcCC-CCCCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhccc---cc----ccc
Q 023184 88 SIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK---QD----QFA 159 (286)
Q Consensus 88 al~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~---~~----~~~ 159 (286)
++.+++++.+.++.-+.. +| |=.......+.|+.+|++.+-.|.-=++|=++|++++-.++... .. ...
T Consensus 62 g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~ 138 (268)
T PRK11562 62 GATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (268)
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 445666655555554433 22 33333345667888887766555544455555544433332110 00 000
Q ss_pred c----cCCCCCchhhHHHHHHHHHHHHHHHHhh
Q 023184 160 G----TLPAGSNIQAFVMEFIITFYLMFVISGV 188 (286)
Q Consensus 160 ~----~~p~~~~~~~~~~E~~~Tf~l~~~v~~~ 188 (286)
. .--..+..+.|+--.+|.++..+.++..
T Consensus 139 ~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~ 171 (268)
T PRK11562 139 HSVALAKTTAPAMVLFFKGALCNWLVCLAIWMA 171 (268)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0012356667777788888888877654
No 34
>PRK09713 focB putative formate transporter; Provisional
Probab=80.02 E-value=26 Score=31.96 Aligned_cols=98 Identities=6% Similarity=0.021 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCCCCChHhhHHHHHhcCCCCCcccc----hhhhhhhhHHHHHHHHHHHhccc-cccccc
Q 023184 87 ISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPP----YILCQVLGSTLAAGTLRLLFQEK-QDQFAG 160 (286)
Q Consensus 87 ~al~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~----yi~aQ~lGa~~g~~l~~~~~~~~-~~~~~~ 160 (286)
.++.+.+++.+.++.-+.. +| |=. ++.-...|+.+|++.+- -+++-++|+++-+.+++..-... +....+
T Consensus 70 ~g~~F~vGLilIv~~g~ELfTg---N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~~ 145 (282)
T PRK09713 70 GGLCFTLGFILLAVCGTSLFTS---SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWG 145 (282)
T ss_pred HHHHHHHHHHHHHHhCccccHH---HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhHH
Confidence 3555666666666554443 32 212 22234578888877773 45566666666665544311100 000000
Q ss_pred --------cCCCCCchhhHHHHHHHHHHHHHHHHhh
Q 023184 161 --------TLPAGSNIQAFVMEFIITFYLMFVISGV 188 (286)
Q Consensus 161 --------~~p~~~~~~~~~~E~~~Tf~l~~~v~~~ 188 (286)
.--+.+..+.|+--.+|.++..+.++..
T Consensus 146 ~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~ 181 (282)
T PRK09713 146 VAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMS 181 (282)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012366778888888999998888753
No 35
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=77.33 E-value=19 Score=31.98 Aligned_cols=98 Identities=10% Similarity=0.160 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhcc-----ccc-cccc-
Q 023184 88 SIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQE-----KQD-QFAG- 160 (286)
Q Consensus 88 al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~-----~~~-~~~~- 160 (286)
++.+.+++.+.++.-+.. --=|-......++.|+.+|.+.+-.|.-=++|=++|+++.-.+... .+. ....
T Consensus 47 ~~~F~~gl~~Iv~~g~eL--fTgn~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~ 124 (239)
T TIGR00790 47 GATFPIGLILVVIAGSDL--FTGNTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVG 124 (239)
T ss_pred HHHHHHHHheeeeeCccc--cccchHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHH
Confidence 444444444443332222 1124333334466788888777655554445555554443333211 011 0000
Q ss_pred ------cCCCCCchhhHHHHHHHHHHHHHHHHh
Q 023184 161 ------TLPAGSNIQAFVMEFIITFYLMFVISG 187 (286)
Q Consensus 161 ------~~p~~~~~~~~~~E~~~Tf~l~~~v~~ 187 (286)
.--+.+..+.|+--+++.+++.+.+..
T Consensus 125 ~~~~a~~K~~~~~~~~f~~gilcn~lV~lav~~ 157 (239)
T TIGR00790 125 SLAIAEHKAHHTFVEAFFLGILCNWLVCLAVWM 157 (239)
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 001235666777777888888777664
No 36
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=71.49 E-value=30 Score=34.92 Aligned_cols=139 Identities=17% Similarity=0.196 Sum_probs=71.4
Q ss_pred HHHHHHhcCCCCCCCC---hHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhccccccccccCCCCCchhhHH
Q 023184 96 MVLVYSLGHISGAHFN---PSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFV 172 (286)
Q Consensus 96 ~~~i~~~~~iSGah~N---PavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~~~~~~~~ 172 (286)
...+++.-.-++|+.- .+|+.+++-...-+......++.+.++|+.+|.++.+.+++.- +.+
T Consensus 353 ~~l~Wi~t~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~-----------~~f---- 417 (650)
T PF04632_consen 353 AGLFWIATGWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHL-----------DGF---- 417 (650)
T ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----------CcH----
Confidence 3333443344445443 3333333334445677788899999999999998888777521 111
Q ss_pred HHHHHHHHHHHHHHhhccCCCCcCchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHH
Q 023184 173 MEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLG 252 (286)
Q Consensus 173 ~E~~~Tf~l~~~v~~~~~~~~~~~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~G 252 (286)
.++...+...+++......++ .......++.+....+. + +......|++.-+-.. ++-++|
T Consensus 418 ~~L~l~l~~~l~~~~~~~~~p---~~~~~g~~~~v~f~~~~-~--~~n~~~~d~~~f~n~~-------------la~l~G 478 (650)
T PF04632_consen 418 PLLALVLAPFLFLGGLLMARP---RTAYIGLGFAVFFLLLL-G--PGNPYSYDFATFLNRA-------------LAILLG 478 (650)
T ss_pred HHHHHHHHHHHHHHHHHHcCc---hHHHHHHHHHHHHHHHh-c--CCCCCCCCHHHHHHHH-------------HHHHHH
Confidence 122222211111111111122 23334444444433322 2 2233456665544333 467889
Q ss_pred HHHHHHHHHHHhcCCC
Q 023184 253 ATAGAWVYNMVRYTDK 268 (286)
Q Consensus 253 a~~a~~~~~~~~~~~~ 268 (286)
.+++.+.++++.+...
T Consensus 479 ~~~a~l~~~li~p~~~ 494 (650)
T PF04632_consen 479 IVIAALVFRLIRPFSP 494 (650)
T ss_pred HHHHHHHHHHHCCCCh
Confidence 9999999998875543
No 37
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=43.86 E-value=2.4e+02 Score=25.16 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhc----cc-cccccc
Q 023184 86 GISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQ----EK-QDQFAG 160 (286)
Q Consensus 86 ~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~----~~-~~~~~~ 160 (286)
..++.+++++...++.-+..- -=|-......++.|+.+|.+.+--|.-=++|=++|++++-.+.. .. ......
T Consensus 59 ~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~~ 136 (250)
T PF01226_consen 59 VGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMGE 136 (250)
T ss_dssp HHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHHH
T ss_pred HHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHH
Confidence 345666666666665544441 22555555567778888887665555444455555444333332 11 000000
Q ss_pred -------cCCCCCchhhHHHHHHHHHHHHHHHHhh
Q 023184 161 -------TLPAGSNIQAFVMEFIITFYLMFVISGV 188 (286)
Q Consensus 161 -------~~p~~~~~~~~~~E~~~Tf~l~~~v~~~ 188 (286)
.--+.+..+.|+--.+|.++..+.++..
T Consensus 137 ~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~ 171 (250)
T PF01226_consen 137 YLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLA 171 (250)
T ss_dssp HHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1113366777888888999998888765
No 38
>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional
Probab=37.37 E-value=4.8e+02 Score=26.88 Aligned_cols=45 Identities=13% Similarity=0.034 Sum_probs=34.5
Q ss_pred CCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhc
Q 023184 108 AHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQ 152 (286)
Q Consensus 108 ah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 152 (286)
+-+..+|..+++.....|.....-+..++++|..+|.++...+++
T Consensus 381 a~~~aAV~~~LfA~~~nP~~~~~~fl~Gtl~a~~~a~l~~f~vLP 425 (652)
T PRK10631 381 AMVMIAVVTSLAMRLPNPRMVAIDFLYGTLAALPLGALYFMVIIP 425 (652)
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467777777777777666666777888899999999888777775
No 39
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=35.43 E-value=8.4 Score=36.08 Aligned_cols=22 Identities=23% Similarity=0.218 Sum_probs=18.9
Q ss_pred HhcCCCCCCCChHhhHHHHHhc
Q 023184 101 SLGHISGAHFNPSVTIAHATCK 122 (286)
Q Consensus 101 ~~~~iSGah~NPavTla~~l~g 122 (286)
+.+.-+|||+.||++++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 4567799999999999988875
No 40
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=32.38 E-value=12 Score=29.39 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=17.8
Q ss_pred cCCCCCCCChHhhHHHHHhcC
Q 023184 103 GHISGAHFNPSVTIAHATCKR 123 (286)
Q Consensus 103 ~~iSGah~NPavTla~~l~g~ 123 (286)
..-|+||+||.+.++-.+.++
T Consensus 5 ~~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 5 TGGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp EESSHHHHHHHHHHHHHHHHT
T ss_pred EcCChhHHHHHHHHHHHHhcc
Confidence 445789999999999999865
No 41
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=31.00 E-value=4.4e+02 Score=24.46 Aligned_cols=22 Identities=14% Similarity=0.463 Sum_probs=18.3
Q ss_pred eeecchHHHHHHHHHHHHHhcC
Q 023184 245 YIVAPPLGATAGAWVYNMVRYT 266 (286)
Q Consensus 245 y~v~p~~Ga~~a~~~~~~~~~~ 266 (286)
.++.|++|.+++.++|+++...
T Consensus 126 wv~sPlia~~~a~~l~~~~~~~ 147 (326)
T PF01384_consen 126 WVISPLIAFILAYILYRLIRRI 147 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999999887543
No 42
>COG1289 Predicted membrane protein [Function unknown]
Probab=24.78 E-value=2.9e+02 Score=28.30 Aligned_cols=26 Identities=31% Similarity=0.313 Sum_probs=14.6
Q ss_pred CCcccchhhhhhhhHHHHHHHHHHHh
Q 023184 126 WKQVPPYILCQVLGSTLAAGTLRLLF 151 (286)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~l~~~~~ 151 (286)
..+..-++.+=++|.++|.++.+...
T Consensus 400 ~~r~~~ri~GTllg~~~g~~~l~~~~ 425 (674)
T COG1289 400 RQRARQRILGTLLGLLLGLLVLLLLL 425 (674)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33455555566666666666555443
No 43
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=24.59 E-value=1.8e+02 Score=24.04 Aligned_cols=25 Identities=24% Similarity=0.582 Sum_probs=16.2
Q ss_pred CCcccchhhhhhhhHHHHHHHHHHH
Q 023184 126 WKQVPPYILCQVLGSTLAAGTLRLL 150 (286)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~l~~~~ 150 (286)
+...+.|..+-+.|+++|..+++.+
T Consensus 123 ~~~v~~F~~St~~Ga~ig~~~l~~L 147 (150)
T PF09512_consen 123 FFFVPPFLISTLIGAIIGYILLKAL 147 (150)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445566677777777777766544
No 44
>PRK15071 lipopolysaccharide ABC transporter permease; Provisional
Probab=23.03 E-value=2.2e+02 Score=26.33 Aligned_cols=60 Identities=17% Similarity=0.148 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCC-CCCCChHhh
Q 023184 56 AEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHIS-GAHFNPSVT 115 (286)
Q Consensus 56 ~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iS-Gah~NPavT 115 (286)
+-=+.++++++++..........++.......++.+|+.+.+...++...+ .++++|.+.
T Consensus 276 a~Pl~~~~~~lla~~~~~~~~R~~~~~~~i~~~i~~~~~y~~~~~~~~~lg~~g~l~P~la 336 (356)
T PRK15071 276 FQPLSVAVMMLMALSFIFGPLRSVTMGARVVTGISFGFVFYVSNEIFGPLSLVYGIPPIIG 336 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH
Confidence 334555666666554433322222111122344555555555444444442 456666543
No 45
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=21.64 E-value=78 Score=31.18 Aligned_cols=28 Identities=25% Similarity=0.466 Sum_probs=24.2
Q ss_pred ceeeeeecchHHHHHHHHHHHHHhcCCC
Q 023184 241 GLWIYIVAPPLGATAGAWVYNMVRYTDK 268 (286)
Q Consensus 241 ~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 268 (286)
|.|-|++.+++|.+++.++..+...+++
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 7899999999999999998887775554
No 46
>PRK15120 lipopolysaccharide ABC transporter permease LptF; Provisional
Probab=21.41 E-value=4.1e+02 Score=24.73 Aligned_cols=23 Identities=9% Similarity=0.219 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhh
Q 023184 50 FMQKLMAEILGTYFMIFAGCASVV 73 (286)
Q Consensus 50 l~~~~i~EfigTf~lv~~~~~~~~ 73 (286)
+.++ ++.=+.++++++++.....
T Consensus 266 l~~R-la~Pl~~l~l~llavpl~~ 288 (366)
T PRK15120 266 LHWR-LTLVFSVFIMALMVVPLSV 288 (366)
T ss_pred HHHH-HHHHHHHHHHHHHHhhhcc
Confidence 3334 6777888888887665443
No 47
>PF03739 YjgP_YjgQ: Predicted permease YjgP/YjgQ family; InterPro: IPR005495 Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long, contain about 6 transmembrane regions and may be permeases, although there is no verification of this.; GO: 0016021 integral to membrane
Probab=20.99 E-value=3e+02 Score=25.19 Aligned_cols=23 Identities=4% Similarity=-0.026 Sum_probs=15.8
Q ss_pred CCceeeeeecchHHHHHHHHHHH
Q 023184 239 YKGLWIYIVAPPLGATAGAWVYN 261 (286)
Q Consensus 239 ~~~~wvy~v~p~~Ga~~a~~~~~ 261 (286)
..-.|..|+.+++-.+++..+++
T Consensus 331 l~p~~a~w~p~ii~~~~~~~l~~ 353 (354)
T PF03739_consen 331 LPPFIAAWLPNIIFLILGLYLLR 353 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh
Confidence 44456778888887777776653
No 48
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=20.72 E-value=2.6e+02 Score=25.98 Aligned_cols=47 Identities=23% Similarity=0.417 Sum_probs=35.1
Q ss_pred ccccchhhhHHHHHhh--------cCCCceee-eeecchHHHHHHHHHHHHHhcCC
Q 023184 221 GASMNPARSLGPAIVS--------SQYKGLWI-YIVAPPLGATAGAWVYNMVRYTD 267 (286)
Q Consensus 221 G~~lNPAr~lg~~i~~--------~~~~~~wv-y~v~p~~Ga~~a~~~~~~~~~~~ 267 (286)
+-.+.|-..|++.... .++++||. =+.|-++|+++|.+.|+.+....
T Consensus 210 ~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~~f 265 (317)
T KOG3030|consen 210 GRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFPNF 265 (317)
T ss_pred chhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 4457888887776654 36888887 45788999999999998886543
No 49
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=20.54 E-value=1.2e+02 Score=18.44 Aligned_cols=22 Identities=18% Similarity=0.466 Sum_probs=17.3
Q ss_pred eeeeecchHHHHHHHHHHHHHh
Q 023184 243 WIYIVAPPLGATAGAWVYNMVR 264 (286)
Q Consensus 243 wvy~v~p~~Ga~~a~~~~~~~~ 264 (286)
|==..+|++.+++++++...+.
T Consensus 11 WhDLAAP~iagIi~s~iv~w~~ 32 (35)
T PF13940_consen 11 WHDLAAPIIAGIIASLIVGWLR 32 (35)
T ss_pred HHHhHhHHHHHHHHHHHHHHHH
Confidence 3345789999999999887765
Done!