Query 023184
Match_columns 286
No_of_seqs 197 out of 1632
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 17:45:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023184.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023184hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 1.5E-53 5.1E-58 389.5 19.6 251 17-269 14-274 (340)
2 2w2e_A AQY1, aquaporin, aquapo 100.0 2E-52 6.8E-57 376.4 17.7 220 48-271 42-271 (279)
3 3cn5_A Aquaporin; membrane pro 100.0 5E-53 1.7E-57 383.7 12.9 259 4-266 9-289 (304)
4 3gd8_A Aquaporin-4; proton exc 100.0 2.6E-51 8.7E-56 358.8 16.3 215 49-265 2-222 (223)
5 3llq_A Aquaporin Z 2; aquapori 100.0 2.4E-51 8.3E-56 364.4 15.4 214 48-264 27-253 (256)
6 2zz9_A Aquaporin-4; water tran 100.0 1.3E-50 4.4E-55 367.1 19.8 223 44-268 6-234 (301)
7 1j4n_A Aquaporin 1; membrane p 100.0 9.9E-51 3.4E-55 364.6 17.5 222 46-269 6-238 (271)
8 2b6o_A Aquaporin-0, lens fiber 100.0 3.4E-50 1.2E-54 359.6 20.5 220 45-268 4-227 (263)
9 1ldf_A Glycerol uptake facilit 100.0 2.9E-50 9.8E-55 363.7 16.4 220 48-269 5-260 (281)
10 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3.7E-50 1.3E-54 359.6 17.0 220 45-268 6-230 (266)
11 2o9g_A Aquaporin Z; integral m 100.0 3E-50 1E-54 354.6 16.0 215 49-266 3-232 (234)
12 3c02_A Aquaglyceroporin; membr 100.0 5.2E-50 1.8E-54 357.9 10.1 226 48-275 7-253 (258)
13 2f2b_A Aquaporin AQPM; protein 100.0 3.2E-48 1.1E-52 344.3 17.9 215 49-265 3-245 (246)
14 2f2b_A Aquaporin AQPM; protein 99.6 3E-15 1E-19 132.3 9.3 99 49-152 142-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.5 8.3E-14 2.8E-18 124.1 7.6 100 166-267 8-111 (263)
16 2o9g_A Aquaporin Z; integral m 99.3 1.3E-12 4.5E-17 114.5 7.7 100 48-153 132-232 (234)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.3 3.4E-12 1.2E-16 113.7 9.7 100 49-153 128-228 (266)
18 3iyz_A Aquaporin-4; water tran 99.3 4.7E-12 1.6E-16 115.7 10.5 100 48-152 171-270 (340)
19 3llq_A Aquaporin Z 2; aquapori 99.3 2E-12 6.9E-17 114.4 7.3 98 48-151 155-253 (256)
20 2w2e_A AQY1, aquaporin, aquapo 99.3 5.4E-12 1.8E-16 113.2 9.9 100 48-152 166-265 (279)
21 3cn5_A Aquaporin; membrane pro 99.3 1.1E-12 3.7E-17 118.9 5.0 106 48-153 182-289 (304)
22 2zz9_A Aquaporin-4; water tran 99.3 4.5E-12 1.5E-16 114.6 8.8 100 48-152 132-231 (301)
23 3gd8_A Aquaporin-4; proton exc 99.3 7.7E-12 2.6E-16 108.8 9.7 98 49-151 124-221 (223)
24 3c02_A Aquaglyceroporin; membr 99.3 2.4E-12 8.2E-17 114.4 4.4 100 166-267 8-113 (258)
25 1j4n_A Aquaporin 1; membrane p 99.2 1.3E-11 4.5E-16 110.4 8.3 99 50-153 137-235 (271)
26 1ldf_A Glycerol uptake facilit 99.2 2.4E-11 8.2E-16 109.2 8.5 103 48-153 143-257 (281)
27 3kcu_A Probable formate transp 93.7 2.7 9.1E-05 37.2 15.4 98 87-188 71-182 (285)
28 4fc4_A Nitrite transporter NIR 81.1 6 0.0002 34.4 8.3 98 87-188 61-171 (261)
29 3tds_E Formate/nitrite transpo 52.8 23 0.00078 30.8 5.8 100 86-188 66-177 (268)
30 3s2u_A UDP-N-acetylglucosamine 41.5 2.4 8.1E-05 38.3 -2.5 22 102-123 8-29 (365)
31 3kly_A Putative formate transp 39.5 1.9E+02 0.0064 25.1 14.9 99 86-188 69-181 (280)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-53 Score=389.53 Aligned_cols=251 Identities=30% Similarity=0.431 Sum_probs=208.5
Q ss_pred eccccccc-cCCCCCCCCCCCCCCCC---CCccccHHHHHHHHHHHHHHHHHHHHhhhhhhccc--CCCCccCchhHHHH
Q 023184 17 KDCEDAIQ-NCPSSAAPPPPPSCGTK---DSVYFSVPFMQKLMAEILGTYFMIFAGCASVVVNL--NNEKIVSLPGISIV 90 (286)
Q Consensus 17 ~~~~~~~~-~~~~~~~~~~~p~~~~~---~~~~~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~--~~~~~~~~~~~al~ 90 (286)
.+++..+| .++++.++++.|+.... ..+.++.+++|++++||+|||+|++++|++++... .+....+++.++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala 93 (340)
T 3iyz_A 14 ASMTGGQQMGRDLYDDDDKDPSSRSIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLC 93 (340)
T ss_pred hhcChhhhcCCCCCCCCCCCCcchhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHH
Confidence 34555555 56778888888866432 23445678999999999999999999999877432 12223567789999
Q ss_pred HHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhccccccccc---cCCCCCc
Q 023184 91 WGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG---TLPAGSN 167 (286)
Q Consensus 91 ~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~---~~p~~~~ 167 (286)
||+++++.+++++++||||+|||||+++++.|+++|.+++.||++|++||++|+++++.++++......+ +.+..+.
T Consensus 94 ~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~ 173 (340)
T 3iyz_A 94 FGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTA 173 (340)
T ss_pred HHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCH
Confidence 9999999999999999999999999999999999999999999999999999999999988654322111 2344578
Q ss_pred hhhHHHHHHHHHHHHHHHHhhccCCCC-cCchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeee
Q 023184 168 IQAFVMEFIITFYLMFVISGVATDNRA-IGELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYI 246 (286)
Q Consensus 168 ~~~~~~E~~~Tf~l~~~v~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~ 246 (286)
.++|+.|+++||+|+++++.+.++++. .....|+.||+++.++.+.++ ++||++|||||+|||+++.++|.++||||
T Consensus 174 ~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v~i~~~~g~--~~TG~amNPARdlGPal~~~~w~~~WVyw 251 (340)
T 3iyz_A 174 GHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAI--NYTGASMNPARSFGPAVIMGNWENHWIYW 251 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHHHHHHHhcc--CCccccccHHHHHHHHHHccCCCcEeehh
Confidence 899999999999999999998654443 245789999999988888777 89999999999999999999999999999
Q ss_pred ecchHHHHHHHHHHHHHhcCCCc
Q 023184 247 VAPPLGATAGAWVYNMVRYTDKP 269 (286)
Q Consensus 247 v~p~~Ga~~a~~~~~~~~~~~~~ 269 (286)
+||++|+++|+++|++++.++.+
T Consensus 252 vgPiiGailaallY~~l~~p~~~ 274 (340)
T 3iyz_A 252 VGPIIGAVLAGALYEYVFCPDVE 274 (340)
T ss_pred HHHHHHHHHHHHHHHHHhCCChh
Confidence 99999999999999999866543
No 2
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=2e-52 Score=376.41 Aligned_cols=220 Identities=23% Similarity=0.344 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhc-cc------CCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHH
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVV-NL------NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHAT 120 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~-~~------~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l 120 (286)
++.+|++++||+|||+|+++++++... +. ..+...+++.++++||+++++.+++++++||||+|||||+++++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 568899999999999999999886421 11 11222356678999999999999999999999999999999999
Q ss_pred hcCCCCCcccchhhhhhhhHHHHHHHHHHHhccccccccccCC--CCCchhhHHHHHHHHHHHHHHHHhhccCCCCcCch
Q 023184 121 CKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLP--AGSNIQAFVMEFIITFYLMFVISGVATDNRAIGEL 198 (286)
Q Consensus 121 ~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p--~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~~~~ 198 (286)
.|+++|.+++.||++|++||++|+++++.++++.. ...+.| ..+..++|+.|+++||+|+++++.++.+++....+
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~--~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~~~~ 199 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEI--AFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWF 199 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSC--CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTTGGG
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccc--eeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCc
Confidence 99999999999999999999999999999997543 223444 34778999999999999999999987666555668
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCC-CceeeeeecchHHHHHHHHHHHHHhcCCCccc
Q 023184 199 AGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQY-KGLWIYIVAPPLGATAGAWVYNMVRYTDKPLR 271 (286)
Q Consensus 199 ~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~-~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~ 271 (286)
.|+.||+++.+..++.+ +.||++|||||+|||+++.+.| .++||||++|++|+++|+++|+++...+.++.
T Consensus 200 ~pl~IGl~v~~~~l~~g--~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~ 271 (279)
T 2w2e_A 200 APFVIGIALLIAHLICI--YYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTT 271 (279)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHHHHHHHhcc--cccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcC
Confidence 99999999999999999 9999999999999999999765 58999999999999999999999987766544
No 3
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=5e-53 Score=383.68 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=188.2
Q ss_pred CCCCCCCCcccce----eccccccc---cCCCCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 023184 4 NSGTGSNGVCVTF----KDCEDAIQ---NCPSSAAPPPPPSCGTKDSVYFSVPFMQKLMAEILGTYFMIFAGCASVVVNL 76 (286)
Q Consensus 4 ~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~ 76 (286)
||+..-++++-+| +|+|+..| +.+|.++||+.|..+.+ +..+.+++|++++||+|||+|+++++++++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~ 86 (304)
T 3cn5_A 9 SSGLVPRGSHMLEDLMSKEVSEEAQAHQHGKDYVDPPPAPFFDLG--ELKLWSFWRAAIAEFIATLLFLYITVATVIGHS 86 (304)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcCcCchhHHHHHHHHHhhccccccccCCCccCCCcccccCcc--ccccHHHHHHHHHHHHHHHHHHHHHhHHHeEec
Confidence 3445445554443 45544322 23677777777776644 445577999999999999999999999876432
Q ss_pred ---CCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhcc
Q 023184 77 ---NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQE 153 (286)
Q Consensus 77 ---~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~ 153 (286)
+.....+++.++++||+++++.+++++++||||+|||||+++++.|+++|.+++.||++|++||++|+++++.++++
T Consensus 87 ~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 166 (304)
T 3cn5_A 87 KETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKG 166 (304)
T ss_dssp TCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred cccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 12234567789999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cccccc-c---cCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCCc-Cc----hhHHHHHHHHHHHHHHHhcCCCCcccc
Q 023184 154 KQDQFA-G---TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI-GE----LAGLAVGSTVLLNVMFAGYMPITGASM 224 (286)
Q Consensus 154 ~~~~~~-~---~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~-~~----~~~~~ig~~v~~~~~~~g~~~~tG~~l 224 (286)
...... + ..+..+..++|+.|+++||+|+++++...++++.. +. +.|+.||++|++..++.+ ++||+++
T Consensus 167 ~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g--~~TG~am 244 (304)
T 3cn5_A 167 PYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATI--PITGTGI 244 (304)
T ss_dssp HHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHH--HHHSCCC
T ss_pred hhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhcc--CCCcccc
Confidence 422111 1 12345788999999999999999999764333322 22 789999999999999999 9999999
Q ss_pred chhhhHHHHHh---hcCCCceeeeeecchHHHHHHHHHHHHHhcC
Q 023184 225 NPARSLGPAIV---SSQYKGLWIYIVAPPLGATAGAWVYNMVRYT 266 (286)
Q Consensus 225 NPAr~lg~~i~---~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 266 (286)
||||+|||+++ .++|.++|+||++|++|+++|+++|++++.+
T Consensus 245 NPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 245 NPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp CHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred ChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 99999999999 6689999999999999999999999998754
No 4
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-51 Score=358.85 Aligned_cols=215 Identities=32% Similarity=0.480 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccc--CCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCC
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNL--NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPW 126 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~--~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 126 (286)
+++|++++||+|||+|+++++++++... .+....++..++++||+++++.+++++++||||+|||||+++++.|+++|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 5899999999999999999999876432 22234567789999999999999999999999999999999999999999
Q ss_pred CcccchhhhhhhhHHHHHHHHHHHhccccccc---cccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCC-cCchhHHH
Q 023184 127 KQVPPYILCQVLGSTLAAGTLRLLFQEKQDQF---AGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELAGLA 202 (286)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~---~~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~-~~~~~~~~ 202 (286)
++++.|+++|++||++|+.+++.+++++.... ..+.|..+..++++.|+++||+|+++++.+.++++. .....|+.
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~ 161 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALA 161 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccHH
Confidence 99999999999999999999999886543221 223455588899999999999999999997654443 24578999
Q ss_pred HHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhc
Q 023184 203 VGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRY 265 (286)
Q Consensus 203 ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 265 (286)
||+++.+.....+ +.||++|||||||||+++.++|+++|+||++|++|+++|+++|++++.
T Consensus 162 iGl~v~~~~~~g~--~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 162 IGFSVAIGHLFAI--NYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp HHHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcc--CCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 9999988887777 789999999999999999999999999999999999999999999874
No 5
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.4e-51 Score=364.36 Aligned_cols=214 Identities=33% Similarity=0.644 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccC-CCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLN-NEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPW 126 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~-~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 126 (286)
.+++|++++||+|||+|++++|+++..... ++...+++.++++||+++++.+++++++||||+|||||+++++.|+++|
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 106 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPA 106 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCH
Confidence 468999999999999999999998764332 3334567889999999999999999999999999999999999999999
Q ss_pred CcccchhhhhhhhHHHHHHHHHHHhccccc---------cccccCCC-CCchhhHHHHHHHHHHHHHHHHhhccCCCCcC
Q 023184 127 KQVPPYILCQVLGSTLAAGTLRLLFQEKQD---------QFAGTLPA-GSNIQAFVMEFIITFYLMFVISGVATDNRAIG 196 (286)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~---------~~~~~~p~-~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~~ 196 (286)
.+++.||++|++||++|+++++.++++... ....+.|. .+..++|+.|+++||+|+++++.+. |++...
T Consensus 107 ~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~-d~~~~~ 185 (256)
T 3llq_A 107 SSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGST-HGRVPA 185 (256)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHH-STTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhc-CCCCCc
Confidence 999999999999999999999998853210 12234553 3778899999999999999999874 555556
Q ss_pred chhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcC--CCceeeeeecchHHHHHHHHHHHHHh
Q 023184 197 ELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQ--YKGLWIYIVAPPLGATAGAWVYNMVR 264 (286)
Q Consensus 197 ~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~--~~~~wvy~v~p~~Ga~~a~~~~~~~~ 264 (286)
.+.|+.||+++.+..++.+ ++||++|||||+|||+++.++ |.++||||++|++|+++|+++|+++.
T Consensus 186 ~~~pl~IGl~v~~i~~~~g--~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 186 GFAPIAIGLALTLIHLISI--PVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp TCHHHHHHHHHHHHHHHHH--HHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHHHHhc--cccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 6899999999999999998 899999999999999999764 56899999999999999999999885
No 6
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=1.3e-50 Score=367.10 Aligned_cols=223 Identities=33% Similarity=0.497 Sum_probs=188.8
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHhhhhhhcccC--CCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHh
Q 023184 44 VYFSVPFMQKLMAEILGTYFMIFAGCASVVVNLN--NEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATC 121 (286)
Q Consensus 44 ~~~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~~--~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~ 121 (286)
+..+.+++|++++||+|||+|+++++++++.... ++...+++.++++||+++++.+++++++||||+|||||+++++.
T Consensus 6 ~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 85 (301)
T 2zz9_A 6 GVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCT 85 (301)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHh
Confidence 3455689999999999999999999998764332 22234567789999999999999999999999999999999999
Q ss_pred cCCCCCcccchhhhhhhhHHHHHHHHHHHhccccccccc-c--CCCCCchhhHHHHHHHHHHHHHHHHhhccCCCC-cCc
Q 023184 122 KRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG-T--LPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGE 197 (286)
Q Consensus 122 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~-~--~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~-~~~ 197 (286)
|+++|.+++.||++|++||++|+++++.++++......+ + .+..+..++|+.|+++||+|+++++.+.++++. ...
T Consensus 86 g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~ 165 (301)
T 2zz9_A 86 RKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTG 165 (301)
T ss_dssp SSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSS
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Confidence 999999999999999999999999999998754322111 2 234478899999999999999999997644443 245
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCCC
Q 023184 198 LAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 268 (286)
Q Consensus 198 ~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 268 (286)
+.|+.||+++.++.+..+ ++||++|||||+|||+++.++|.++|+||++|++|+++|+++|++++.++.
T Consensus 166 ~~pl~IGl~v~i~~~~g~--~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 166 SVALAIGFSVAIGHLFAI--NYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp CHHHHHHHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred hHhHHHHHHHHHHHHHhc--CCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 789999999988888887 889999999999999999999999999999999999999999999976543
No 7
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=9.9e-51 Score=364.57 Aligned_cols=222 Identities=27% Similarity=0.432 Sum_probs=189.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhhhhhccc-------CCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHH
Q 023184 46 FSVPFMQKLMAEILGTYFMIFAGCASVVVNL-------NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAH 118 (286)
Q Consensus 46 ~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~-------~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~ 118 (286)
.+.+++|++++||+||++|++++|++.+... ..+...+++.++++||+++++.+++++++||||+|||||+++
T Consensus 6 ~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~ 85 (271)
T 1j4n_A 6 KKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGL 85 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHH
Confidence 4467999999999999999999999875322 112223467889999999999999999999999999999999
Q ss_pred HHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhcccccccc---ccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCCC-
Q 023184 119 ATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFA---GTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRA- 194 (286)
Q Consensus 119 ~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~---~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~- 194 (286)
++.|+++|.+++.||++|++||++|+++++.++.+...... .+.|..+..++++.|+++||+|+++++.+.++++.
T Consensus 86 ~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~~ 165 (271)
T 1j4n_A 86 LLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRD 165 (271)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSCCC
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccccCCC
Confidence 99999999999999999999999999999999864332222 23455577889999999999999999987543332
Q ss_pred cCchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCCCc
Q 023184 195 IGELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 269 (286)
Q Consensus 195 ~~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~ 269 (286)
.....|+.||+++.++++..+ ++||+++||||||||+++.++|.++|+||++|++|+++|+++|++++.++.+
T Consensus 166 ~~~~~pl~IGl~v~~~~~~~~--~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~~ 238 (271)
T 1j4n_A 166 LGGSGPLAIGFSVALGHLLAI--DYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSS 238 (271)
T ss_dssp CCSCHHHHHHHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred ccccHHHHHHHHHHHHHHhcc--CCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 246889999999998888877 7899999999999999999999999999999999999999999999876543
No 8
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=3.4e-50 Score=359.62 Aligned_cols=220 Identities=29% Similarity=0.465 Sum_probs=190.6
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCC
Q 023184 45 YFSVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRF 124 (286)
Q Consensus 45 ~~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~ 124 (286)
..+.+++|++++||+|||+|+++++++.... ++...+++.++++||+++++.+++++++||||+|||||+++++.|++
T Consensus 4 ~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~--~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~ 81 (263)
T 2b6o_A 4 LRSASFWRAIFAEFFATLFYVFFGLGASLRW--APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQM 81 (263)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCS
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCC
Confidence 3456799999999999999999999987543 22234566789999999999999999999999999999999999999
Q ss_pred CCCcccchhhhhhhhHHHHHHHHHHHhccccccccc---cCCCCCchhhHHHHHHHHHHHHHHHHhhccCCC-CcCchhH
Q 023184 125 PWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG---TLPAGSNIQAFVMEFIITFYLMFVISGVATDNR-AIGELAG 200 (286)
Q Consensus 125 ~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~---~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~-~~~~~~~ 200 (286)
+|.+++.||++|++||++|+.+++.++++......+ +.|..+..++|+.|+++||+|+++++.+.++++ ......|
T Consensus 82 ~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~p 161 (263)
T 2b6o_A 82 SLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA 161 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHH
Confidence 999999999999999999999999999754322222 335567889999999999999999999854333 2356789
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHHhcCCC
Q 023184 201 LAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 268 (286)
Q Consensus 201 ~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 268 (286)
+.||+++.+++++.+ ++||++|||||||||+++.++|.++||||++|++|+++|+++|++++.++.
T Consensus 162 l~IGl~v~~~~~~~g--~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 162 LAVGFSLTLGHLFGM--YYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp HHHHHHHHHHHHHHT--TTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHHHHHhcc--CCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999 999999999999999999999999999999999999999999999976543
No 9
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=2.9e-50 Score=363.65 Aligned_cols=220 Identities=32% Similarity=0.449 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
++++|++++||+|||+|++++++++.....++...+...++++||+++++.+++++++||||+|||||+++++.|+++|.
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 84 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKR 84 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHH
Confidence 45899999999999999999998875433222223445689999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhccccc-------------------cccccCCC--CCchhhHHHHHHHHHHHHHHHH
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQEKQD-------------------QFAGTLPA--GSNIQAFVMEFIITFYLMFVIS 186 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~-------------------~~~~~~p~--~~~~~~~~~E~~~Tf~l~~~v~ 186 (286)
+++.||++|++||++|+++++.++++... ...++.|. .+..++|+.|+++||+|+++++
T Consensus 85 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il 164 (281)
T 1ldf_A 85 KVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLIL 164 (281)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999864311 12335554 4788999999999999999999
Q ss_pred hhccCCCCc--CchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc-------CC------CceeeeeecchH
Q 023184 187 GVATDNRAI--GELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS-------QY------KGLWIYIVAPPL 251 (286)
Q Consensus 187 ~~~~~~~~~--~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~-------~~------~~~wvy~v~p~~ 251 (286)
.+.++++.. ..+.|+.||+++.+..+..+ +.||++|||||||||+++.. .| .++||||++|++
T Consensus 165 ~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g--~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~ 242 (281)
T 1ldf_A 165 ALTDDGNGVPRGPLAPLLIGLLIAVIGASMG--PLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIV 242 (281)
T ss_dssp HHHCTTSSSCCGGGHHHHHHHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHH
T ss_pred HHhccCCCCcccchHHHHHHHHHHHHHHhcc--cccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHH
Confidence 986444332 46899999999999999999 99999999999999999861 12 279999999999
Q ss_pred HHHHHHHHHHHHhcCCCc
Q 023184 252 GATAGAWVYNMVRYTDKP 269 (286)
Q Consensus 252 Ga~~a~~~~~~~~~~~~~ 269 (286)
|+++|+++|++++.++.|
T Consensus 243 Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 243 GAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHTGGGC-
T ss_pred HHHHHHHHHHHHhCccCC
Confidence 999999999999876554
No 10
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-50 Score=359.56 Aligned_cols=220 Identities=29% Similarity=0.456 Sum_probs=189.6
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCC
Q 023184 45 YFSVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRF 124 (286)
Q Consensus 45 ~~~~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~ 124 (286)
..+.+++|++++||+|||+|+++++++..... +...+++.++++||+++++.+++++++||||+|||||+++++.|++
T Consensus 6 ~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~--~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 83 (266)
T 3d9s_A 6 VCSVAFLKAVFAEFLATLIFVFFGLGSALKWP--SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQI 83 (266)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCS--SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSS
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCC
Confidence 34567999999999999999999999875322 2234677899999999999999999999999999999999999999
Q ss_pred CCCcccchhhhhhhhHHHHHHHHHHHhccccccccc-cC--CCCCchhhHHHHHHHHHHHHHHHHhhccCCCC-cCchhH
Q 023184 125 PWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG-TL--PAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELAG 200 (286)
Q Consensus 125 ~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~-~~--p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~-~~~~~~ 200 (286)
+|.+++.||++|++||++|+++++.++++......+ +. +..+..++|+.|+++||+|+++++.+.++++. .....|
T Consensus 84 ~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~p 163 (266)
T 3d9s_A 84 SLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPA 163 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccchHH
Confidence 999999999999999999999999999653222222 22 34478899999999999999999998533332 246789
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcCCCc-eeeeeecchHHHHHHHHHHHHHhcCCC
Q 023184 201 LAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQYKG-LWIYIVAPPLGATAGAWVYNMVRYTDK 268 (286)
Q Consensus 201 ~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~~~~-~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 268 (286)
+.||+++.++.+..+ ++||+++||||||||+++.++|.+ +||||++|++|+++|+++|++++.++.
T Consensus 164 l~IGl~v~~~~~~~g--~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 230 (266)
T 3d9s_A 164 LSIGLSVTLGHLVGI--YFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 230 (266)
T ss_dssp HHHHHHHHHHHHHHH--HHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHHHhh--ccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCc
Confidence 999999999999888 899999999999999999999998 999999999999999999999976543
No 11
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=3e-50 Score=354.64 Aligned_cols=215 Identities=33% Similarity=0.598 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccC-CCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNLN-NEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~~-~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
+++|++++||+|||+|++++|+++..+.. ++...+++.++++||+++++.+++++++||||+|||||+++++.|+++|+
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAK 82 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHH
Confidence 37899999999999999999998765442 22334677899999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhcccc-----------ccccccCCC-CCchhhHHHHHHHHHHHHHHHHhhccCCCCc
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQEKQ-----------DQFAGTLPA-GSNIQAFVMEFIITFYLMFVISGVATDNRAI 195 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~~~~-----------~~~~~~~p~-~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~~~ 195 (286)
+++.||++|++||++|+.+++.++++.. .....+.|. .+..++|+.|+++||+|+++++.+. |++..
T Consensus 83 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~-d~~~~ 161 (234)
T 2o9g_A 83 EVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT-DKFAP 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHT-STTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhc-CCCCc
Confidence 9999999999999999999999986432 012234554 3778999999999999999999975 45545
Q ss_pred CchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhcC--CCceeeeeecchHHHHHHHHHHHHHhcC
Q 023184 196 GELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSSQ--YKGLWIYIVAPPLGATAGAWVYNMVRYT 266 (286)
Q Consensus 196 ~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~~--~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 266 (286)
....|+.||+++.+..+..+ ++||+++||||||||+++.++ |+++|+||++|++|+++|+++|++++.+
T Consensus 162 ~~~~pl~IGl~v~~~~~~~g--~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 162 AGFAPIAIGLACTLIHLISI--PVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp TTCHHHHHHHHHHHHHHHHH--HHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred cchHHHHHHHHHHHHHHHcc--CCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 66899999999999999999 999999999999999999876 4599999999999999999999998743
No 12
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=5.2e-50 Score=357.89 Aligned_cols=226 Identities=27% Similarity=0.393 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
++++|++++||+|||+|++++++++......+...+++.++++||+++++.+++++++||||+|||||+++++.|+++|+
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 45899999999999999999999875432222234677899999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhcccccccc--------ccCCCCCchhhHHHHHHHHHHHHHHHHhhccCCC--CcCc
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQEKQDQFA--------GTLPAGSNIQAFVMEFIITFYLMFVISGVATDNR--AIGE 197 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~--------~~~p~~~~~~~~~~E~~~Tf~l~~~v~~~~~~~~--~~~~ 197 (286)
+++.||++|++||++|+++++.++++...... +.....+..++++.|+++||+|+++++.+.++++ ....
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~~ 166 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHI 166 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCcccc
Confidence 99999999999999999999999864322110 1111223456999999999999999999753332 2345
Q ss_pred hh-HHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc------CC----CceeeeeecchHHHHHHHHHHHHHhcC
Q 023184 198 LA-GLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS------QY----KGLWIYIVAPPLGATAGAWVYNMVRYT 266 (286)
Q Consensus 198 ~~-~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~------~~----~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 266 (286)
+. |+.||+++.+..+..+ +.||++|||||||||+++.. .| .++||||++|++|+++|+++|++++.+
T Consensus 167 ~~~pl~IGl~v~~~~~~~g--~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~ 244 (258)
T 3c02_A 167 LKLSSVVGLIILCIGITFG--GNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICP 244 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred cHHHHHHHHHHHHHHHhcc--CccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhcc
Confidence 77 9999999999999999 99999999999999999873 34 669999999999999999999999877
Q ss_pred CCccccccc
Q 023184 267 DKPLREITK 275 (286)
Q Consensus 267 ~~~~~~~~~ 275 (286)
+.|.+++++
T Consensus 245 ~~~~~~~~~ 253 (258)
T 3c02_A 245 LVDLANNEK 253 (258)
T ss_dssp HHHHC----
T ss_pred cCCCccccc
Confidence 665544333
No 13
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=3.2e-48 Score=344.27 Aligned_cols=215 Identities=33% Similarity=0.560 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccc--CC----------C-----CccCchhHHHHHHHHHHHHHHHhcCCCCCCCC
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNL--NN----------E-----KIVSLPGISIVWGLVVMVLVYSLGHISGAHFN 111 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~--~~----------~-----~~~~~~~~al~~g~~~~~~i~~~~~iSGah~N 111 (286)
+++|++++||+|||+|+++++++++... .+ + ...+++.++++||+++++.+++++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4789999999999999999998765432 11 1 11123448999999999999999999999999
Q ss_pred hHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhcccc---ccccccCC--CCCchhhHHHHHHHHHHHHHHHH
Q 023184 112 PSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQ---DQFAGTLP--AGSNIQAFVMEFIITFYLMFVIS 186 (286)
Q Consensus 112 PavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~---~~~~~~~p--~~~~~~~~~~E~~~Tf~l~~~v~ 186 (286)
||||+++++.|+++|++++.||++|++||++|+.+++.+++++. .....+.| ..+..++++.|+++||+|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999997632 23344555 44788999999999999999999
Q ss_pred hhccCCCCcCchhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHh--h----cCCCceeeeeecchHHHHHHHHHH
Q 023184 187 GVATDNRAIGELAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIV--S----SQYKGLWIYIVAPPLGATAGAWVY 260 (286)
Q Consensus 187 ~~~~~~~~~~~~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~--~----~~~~~~wvy~v~p~~Ga~~a~~~~ 260 (286)
.+..+++......|+.+|+++.+.+++.+ +.||+++||||||||+++ . ++|.+.|+||++|++|+++|+++|
T Consensus 163 ~~~~~~~~~~~~~pl~iGl~v~~~~~~~g--~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y 240 (246)
T 2f2b_A 163 GIAVDERAPKGFAGIIIGLTVAGIITTLG--NISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 (246)
T ss_dssp HHTTSTTSCTTCHHHHHHHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCceeeHHHHHHHHHHHhccc--ccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHH
Confidence 97666665566889999999999999999 999999999999999993 2 368888999999999999999999
Q ss_pred HHHhc
Q 023184 261 NMVRY 265 (286)
Q Consensus 261 ~~~~~ 265 (286)
++++.
T Consensus 241 ~~l~~ 245 (246)
T 2f2b_A 241 QYLTS 245 (246)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 98863
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.59 E-value=3e-15 Score=132.34 Aligned_cols=99 Identities=26% Similarity=0.417 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHH-----hcC
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHAT-----CKR 123 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l-----~g~ 123 (286)
+.++.++.|+++||+|++..++....++.. ....++.+|+.+...+++.+++||+|+|||+|+++.+ .++
T Consensus 142 ~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~ 216 (246)
T 2f2b_A 142 SYWQAMLAEVVGTFLLMITIMGIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGT 216 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_pred chHHHHHHHHHHHHHHHheeeEEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCC
Confidence 578999999999999999987754322211 1236889999999999999999999999999999998 335
Q ss_pred CCCCcccchhhhhhhhHHHHHHHHHHHhc
Q 023184 124 FPWKQVPPYILCQVLGSTLAAGTLRLLFQ 152 (286)
Q Consensus 124 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 152 (286)
..|.+.|+||++|++|+++|+++++.+++
T Consensus 217 ~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 217 DLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp CCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 67888899999999999999998887653
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.46 E-value=8.3e-14 Score=124.10 Aligned_cols=100 Identities=30% Similarity=0.302 Sum_probs=84.3
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhccCCC-CcCc--hhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc-CCCc
Q 023184 166 SNIQAFVMEFIITFYLMFVISGVATDNR-AIGE--LAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS-QYKG 241 (286)
Q Consensus 166 ~~~~~~~~E~~~Tf~l~~~v~~~~~~~~-~~~~--~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~-~~~~ 241 (286)
+..+.++.|+++||+|+++.+......+ .... ...+.+|+++++.+++.+ +.||+|+|||++++.++.+. .|..
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g--~iSGahlNPAVTla~~~~g~~~~~~ 85 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG--HISGAHVNPAVTFAFLVGSQMSLLR 85 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGG--GTTCCCCSHHHHHHHHHTTCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhh--ccCcCeeChHHHHHHHHhcCCCHHH
Confidence 4567899999999999999888654322 2122 256888999999999999 99999999999999999875 6889
Q ss_pred eeeeeecchHHHHHHHHHHHHHhcCC
Q 023184 242 LWIYIVAPPLGATAGAWVYNMVRYTD 267 (286)
Q Consensus 242 ~wvy~v~p~~Ga~~a~~~~~~~~~~~ 267 (286)
.|+||++|++|+++|+.+++.+++++
T Consensus 86 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 86 AICYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 99999999999999999999998653
No 16
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.34 E-value=1.3e-12 Score=114.49 Aligned_cols=100 Identities=13% Similarity=0.179 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhc-CCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCK-RFPW 126 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g-~~~~ 126 (286)
.+..+.++.|+++||+|++..++... ++ .. . ...++.+|+.+....+..++.||+.+|||+++++.+.. ...|
T Consensus 132 ~~~~~~~~~E~i~T~~Lv~~i~~~~d-~~-~~--~--~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~ 205 (234)
T 2o9g_A 132 YSMLSALVVELVLSAGFLLVIHGATD-KF-AP--A--GFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWAL 205 (234)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTS-TT-SC--T--TCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcC-CC-Cc--c--chHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCC
Confidence 35788999999999999998776432 11 11 1 13678899999999999999999999999999999974 3456
Q ss_pred CcccchhhhhhhhHHHHHHHHHHHhcc
Q 023184 127 KQVPPYILCQVLGSTLAAGTLRLLFQE 153 (286)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~l~~~~~~~ 153 (286)
.++|+||++|++|+++|+++++.++.+
T Consensus 206 ~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 206 EQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 699999999999999999998887653
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.33 E-value=3.4e-12 Score=113.74 Aligned_cols=100 Identities=18% Similarity=0.148 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCc
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQ 128 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (286)
+..+.++.|+++||+|++..++... .++.. ... ..++.+|+.+.+.....++.||+.+|||+++++.+... .|.+
T Consensus 128 s~~~~~~~E~i~Tf~Lv~~il~~~d-~~~~~-~~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~ 202 (266)
T 3d9s_A 128 TQGQAMVVELILTFQLALCIFASTD-SRRTS-PVG--SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSP 202 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC-TTCCS-CCC--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc-ccCCC-ccc--hHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-Cccc
Confidence 5788999999999999998876532 11111 111 25778888888888889999999999999999999765 7888
Q ss_pred -ccchhhhhhhhHHHHHHHHHHHhcc
Q 023184 129 -VPPYILCQVLGSTLAAGTLRLLFQE 153 (286)
Q Consensus 129 -~~~yi~aQ~lGa~~g~~l~~~~~~~ 153 (286)
+|+||++|++|+++|+++++.++.+
T Consensus 203 ~~Wvy~vgP~~Ga~la~~~y~~l~~~ 228 (266)
T 3d9s_A 203 AHWVFWVGPIVGAVLAAILYFYLLFP 228 (266)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CEeeeehHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999998887754
No 18
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.33 E-value=4.7e-12 Score=115.68 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
.+..+.++.|+++||+|+++.++......... . ...++.+|+.+.+.....++.||+.+|||+++++.+... .|.
T Consensus 171 ~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~--~--~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~w~ 245 (340)
T 3iyz_A 171 LTAGHGLLVELIITFQLVFTIFASCDDKRTDV--T--GSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWE 245 (340)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhcCccCCc--c--cchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-CCC
Confidence 35778999999999999998776532211110 1 124677888887777777799999999999999999865 789
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhc
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQ 152 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~ 152 (286)
+.|+||+++++|+++|++++..++.
T Consensus 246 ~~WVywvgPiiGailaallY~~l~~ 270 (340)
T 3iyz_A 246 NHWIYWVGPIIGAVLAGALYEYVFC 270 (340)
T ss_pred cEeehhHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999988874
No 19
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.32 E-value=2e-12 Score=114.45 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHh-cCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATC-KRFPW 126 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~-g~~~~ 126 (286)
.+..+.++.|+++||+|+++.++....+ . . . ...++.+|+.+....+..++.||+.+|||+++++.+. |...|
T Consensus 155 ~s~~~~f~~E~i~Tf~Lv~~il~~~d~~-~-~--~--~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~ 228 (256)
T 3llq_A 155 YSLVSALLIEIILTAFFLIVILGSTHGR-V-P--A--GFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWAL 228 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHSTT-S-C--T--TCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcCCC-C-C--c--cchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcc
Confidence 3578899999999999999876543211 1 1 1 1257889999999999999999999999999999986 44456
Q ss_pred CcccchhhhhhhhHHHHHHHHHHHh
Q 023184 127 KQVPPYILCQVLGSTLAAGTLRLLF 151 (286)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~l~~~~~ 151 (286)
...|+||++|++|+++|+++++.+.
T Consensus 229 ~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 229 QQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cceeeeeeHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999888764
No 20
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.31 E-value=5.4e-12 Score=113.19 Aligned_cols=100 Identities=19% Similarity=0.121 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
.+..+.++.|+++||+|+++.++....+. .. ....++.+|+.+.+..+..++.||+.+|||+++++.+....-+.
T Consensus 166 ~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~-~~----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~ 240 (279)
T 2w2e_A 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKH-RA----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPN 240 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSCS-TT----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCC-CC----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchh
Confidence 35788999999999999998776532211 11 12357889999999999999999999999999999998764456
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhc
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQ 152 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~ 152 (286)
.+|+||++|++|+++|+++++.+..
T Consensus 241 ~~WVy~vgPiiGa~la~~ly~~l~~ 265 (279)
T 2w2e_A 241 YHWIYWLGPILGAFLAYSIWQMWKW 265 (279)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 7999999999999999999888764
No 21
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.31 E-value=1.1e-12 Score=118.92 Aligned_cols=106 Identities=16% Similarity=0.221 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHh--cCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATC--KRFP 125 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~--g~~~ 125 (286)
.+..+.++.|+++||+|+++.+.....+............++.+|+.+.+..++.++.||+.+|||+++++.+. +...
T Consensus 182 ~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~ 261 (304)
T 3cn5_A 182 YNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKV 261 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCC
Confidence 35788999999999999998774322111111110011257889999999999999999999999999999997 2337
Q ss_pred CCcccchhhhhhhhHHHHHHHHHHHhcc
Q 023184 126 WKQVPPYILCQVLGSTLAAGTLRLLFQE 153 (286)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~ 153 (286)
|.+.|+||++|++|+++|+++++.++..
T Consensus 262 w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 262 WDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 8899999999999999999998877653
No 22
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.30 E-value=4.5e-12 Score=114.60 Aligned_cols=100 Identities=19% Similarity=0.305 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCC
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 127 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 127 (286)
.+..+.++.|+++||+|++..++....+ ... .. ...++.+|+.+.+.....++.||+.+|||+++++.+... .|.
T Consensus 132 ~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~-~~~-~~--~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~-~w~ 206 (301)
T 2zz9_A 132 LTAGHGLLVELIITFQLVFTIFASCDDK-RTD-VT--GSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWE 206 (301)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCSS-SSC-CS--SCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-CCT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCC-CCC-cc--chHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC-CCc
Confidence 3578899999999999999877643211 111 11 125778888887777777799999999999999999865 799
Q ss_pred cccchhhhhhhhHHHHHHHHHHHhc
Q 023184 128 QVPPYILCQVLGSTLAAGTLRLLFQ 152 (286)
Q Consensus 128 ~~~~yi~aQ~lGa~~g~~l~~~~~~ 152 (286)
++|+||++|++|+++|+++++.++.
T Consensus 207 ~~WVy~vgPiiGailaa~ly~~l~~ 231 (301)
T 2zz9_A 207 NHWIYWVGPIIGAVLAGALYEYVFC 231 (301)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceeeeeeHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999887764
No 23
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.30 E-value=7.7e-12 Score=108.81 Aligned_cols=98 Identities=21% Similarity=0.334 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCc
Q 023184 49 PFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQ 128 (286)
Q Consensus 49 ~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 128 (286)
+..+.++.|+++||+|++..+.....+ ++.. .. ..++.+|+.+.+.....++.||+.+|||+++++.+... .|.+
T Consensus 124 s~~~~~~~E~i~Tf~Lv~~i~~~~~~~-~~~~-~~--~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~-~w~~ 198 (223)
T 3gd8_A 124 TAGHGLLVELIITFQLVFTIFASCDSK-RTDV-TG--SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWEN 198 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCTT-CSCC-CS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT-CCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccc-cCCc-cC--CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc-CCCc
Confidence 477899999999999999876643211 1111 11 24677888877666667789999999999999999865 7999
Q ss_pred ccchhhhhhhhHHHHHHHHHHHh
Q 023184 129 VPPYILCQVLGSTLAAGTLRLLF 151 (286)
Q Consensus 129 ~~~yi~aQ~lGa~~g~~l~~~~~ 151 (286)
+|+||+++++|+++|+++++.++
T Consensus 199 ~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 199 HWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHc
Confidence 99999999999999999888765
No 24
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.26 E-value=2.4e-12 Score=114.39 Aligned_cols=100 Identities=27% Similarity=0.389 Sum_probs=81.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhcc---CCCCcCc--hhHHHHHHHHHHHHHHHhcCCCCccccchhhhHHHHHhhc-CC
Q 023184 166 SNIQAFVMEFIITFYLMFVISGVAT---DNRAIGE--LAGLAVGSTVLLNVMFAGYMPITGASMNPARSLGPAIVSS-QY 239 (286)
Q Consensus 166 ~~~~~~~~E~~~Tf~l~~~v~~~~~---~~~~~~~--~~~~~ig~~v~~~~~~~g~~~~tG~~lNPAr~lg~~i~~~-~~ 239 (286)
+..+.++.||++||+|++..+.... ..+.... ...+.+|+++++.+++.+ +.||+|+|||++++..+.+. .|
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g--~iSGaHlNPAVTla~~~~g~~~~ 85 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSA--KLSGAHLNLAVSIGLSSINKFDL 85 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHH--HHHCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheec--ccCcCeeChHHHHHHHHhCCCcH
Confidence 4578899999999999997655321 1111122 246788899999999999 99999999999999999876 79
Q ss_pred CceeeeeecchHHHHHHHHHHHHHhcCC
Q 023184 240 KGLWIYIVAPPLGATAGAWVYNMVRYTD 267 (286)
Q Consensus 240 ~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 267 (286)
.....|+++|++|+++|+.+.+.+++++
T Consensus 86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 86 KKIPVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcchh
Confidence 9999999999999999999998887653
No 25
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.24 E-value=1.3e-11 Score=110.35 Aligned_cols=99 Identities=15% Similarity=0.170 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcCCCCCcc
Q 023184 50 FMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQV 129 (286)
Q Consensus 50 l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 129 (286)
..+.++.|+++||+|+++.++... .++.. .. ...++.+|+.+.+.....++.||+.+|||+++++.+... .|.++
T Consensus 137 ~~~~~~~E~i~T~~Lv~~i~~~~d-~~~~~-~~--~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~-~~~~~ 211 (271)
T 1j4n_A 137 SGQGLGIEIIGTLQLVLCVLATTD-RRRRD-LG--GSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH-NFQDH 211 (271)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHHTC-SSCCC-CC--SCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT-CCTTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcc-ccCCC-cc--ccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC-CCcce
Confidence 356788999999999998765432 11111 11 125778888888777777789999999999999998765 78899
Q ss_pred cchhhhhhhhHHHHHHHHHHHhcc
Q 023184 130 PPYILCQVLGSTLAAGTLRLLFQE 153 (286)
Q Consensus 130 ~~yi~aQ~lGa~~g~~l~~~~~~~ 153 (286)
|+||++|++|+++|+++++.++..
T Consensus 212 wv~~vgP~~Ga~la~~~y~~~~~~ 235 (271)
T 1j4n_A 212 WIFWVGPFIGAALAVLIYDFILAP 235 (271)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTSC
T ss_pred eHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999998877653
No 26
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.21 E-value=2.4e-11 Score=109.23 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCccCchhHHHHHHHHHHHHHHHhcCCCCCCCChHhhHHHHHhcC----
Q 023184 48 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKR---- 123 (286)
Q Consensus 48 ~~l~~~~i~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~al~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~---- 123 (286)
.+..+.++.|+++||+|++..++... .++.. ......++.+|+.+....+..++.||+.+|||+++++.+...
T Consensus 143 ~s~~~~~~~E~i~Tf~Lv~~il~~~d-~~~~~--~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~ 219 (281)
T 1ldf_A 143 INFVQAFAVEMVITAILMGLILALTD-DGNGV--PRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGW 219 (281)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHC-TTSSS--CCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhc-cCCCC--cccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhccc
Confidence 35889999999999999998776532 11111 111236888999999999999999999999999999988641
Q ss_pred --CCC------CcccchhhhhhhhHHHHHHHHHHHhcc
Q 023184 124 --FPW------KQVPPYILCQVLGSTLAAGTLRLLFQE 153 (286)
Q Consensus 124 --~~~------~~~~~yi~aQ~lGa~~g~~l~~~~~~~ 153 (286)
..| ..+|+||++|++|+++|+++++.++..
T Consensus 220 g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~ 257 (281)
T 1ldf_A 220 GNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR 257 (281)
T ss_dssp TTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred ccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCc
Confidence 122 269999999999999999999888753
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=93.75 E-value=2.7 Score=37.20 Aligned_cols=98 Identities=13% Similarity=0.182 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCCCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhc--ccc---cc-cc
Q 023184 87 ISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQ--EKQ---DQ-FA 159 (286)
Q Consensus 87 ~al~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~--~~~---~~-~~ 159 (286)
.++.+.+++.+.++.-+.. +| |--.++ ..+.|+.+|.+.+--|.-=++|=++|++++-++.. ... .. ..
T Consensus 71 ~g~~F~vGL~lVvl~G~ELFTg---n~l~~~-a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~ 146 (285)
T 3kcu_A 71 GGICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWG 146 (285)
T ss_dssp HHHHHTHHHHHHHHHTCCCTTT---THHHHH-HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHH
T ss_pred HHHHHHHHHHHHHHhCcccccc---chHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHH
Confidence 4566677777766665554 43 322333 34578888877665555444444554444333311 100 00 00
Q ss_pred c-------cCCCCCchhhHHHHHHHHHHHHHHHHhh
Q 023184 160 G-------TLPAGSNIQAFVMEFIITFYLMFVISGV 188 (286)
Q Consensus 160 ~-------~~p~~~~~~~~~~E~~~Tf~l~~~v~~~ 188 (286)
. .--..+..+.|+-=.+|.++..+.++..
T Consensus 147 ~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 147 LNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0112366777888888999988887764
No 28
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=81.11 E-value=6 Score=34.45 Aligned_cols=98 Identities=8% Similarity=0.106 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCCCCChHhhHHHHHhcCCCCCcccchhh----hhhhhHHHHHHHHHHHhccccccccc-
Q 023184 87 ISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYIL----CQVLGSTLAAGTLRLLFQEKQDQFAG- 160 (286)
Q Consensus 87 ~al~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~l~~~~~~~~~~~~~~- 160 (286)
.++.+++++.+.++.-+.. +| |-.......+.|+.+|.+.+--|. +-++|+++-+.++... +........
T Consensus 61 ~g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~-g~~~~~~~~~ 136 (261)
T 4fc4_A 61 MGATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWG-GGSLLPVDTS 136 (261)
T ss_dssp HHHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCTTSSCTTS
T ss_pred HHHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccCchHHH
Confidence 4555555555555443333 22 433222345568888887766654 4555555444443321 100000000
Q ss_pred ---cC----CCCCchhhHHHHHHHHHHHHHHHHhh
Q 023184 161 ---TL----PAGSNIQAFVMEFIITFYLMFVISGV 188 (286)
Q Consensus 161 ---~~----p~~~~~~~~~~E~~~Tf~l~~~v~~~ 188 (286)
.. -..+..+.|+--.+|.++..+.++..
T Consensus 137 ~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 137 IVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01245566777778888888777664
No 29
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=52.81 E-value=23 Score=30.81 Aligned_cols=100 Identities=12% Similarity=0.146 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHHHHHhcCC-CCCCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhcccc----ccccc
Q 023184 86 GISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQ----DQFAG 160 (286)
Q Consensus 86 ~~al~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~----~~~~~ 160 (286)
..++.+.+++.+.++.-+.. +| |-.......+.|+.+|.+.+--|.-=++|=++|++++-.++.... .....
T Consensus 66 l~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~~ 142 (268)
T 3tds_E 66 VMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVAE 142 (268)
T ss_dssp HHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHHH
Confidence 34555666666665554443 22 333222345678888887765555444555555444333321110 00000
Q ss_pred -------cCCCCCchhhHHHHHHHHHHHHHHHHhh
Q 023184 161 -------TLPAGSNIQAFVMEFIITFYLMFVISGV 188 (286)
Q Consensus 161 -------~~p~~~~~~~~~~E~~~Tf~l~~~v~~~ 188 (286)
.--..+..+.|+--.+|.++..+.++..
T Consensus 143 ~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 177 (268)
T 3tds_E 143 FFANTAASKASMPFTALFFRGILCNILVCVSVLCS 177 (268)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012356677777888888888877754
No 30
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=41.46 E-value=2.4 Score=38.26 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=18.1
Q ss_pred hcCCCCCCCChHhhHHHHHhcC
Q 023184 102 LGHISGAHFNPSVTIAHATCKR 123 (286)
Q Consensus 102 ~~~iSGah~NPavTla~~l~g~ 123 (286)
.+.-||||++||++++-.+..+
T Consensus 8 ~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHT
T ss_pred EcCCCHHHHHHHHHHHHHHHhC
Confidence 4455889999999999988764
No 31
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=39.53 E-value=1.9e+02 Score=25.06 Aligned_cols=99 Identities=10% Similarity=0.195 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHHHHHhcCC-CCCCCChHhhHHHHHhcCCCCCcccchhhhhhhhHHHHHHHHHHHhc--ccc---cc-c
Q 023184 86 GISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQ--EKQ---DQ-F 158 (286)
Q Consensus 86 ~~al~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~--~~~---~~-~ 158 (286)
..++.+.+++.+.++.-+.. +|--+ .++ ..+.|+++|.+.+--|.-=++|=++|++++-+++. ... .. .
T Consensus 69 l~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~ 144 (280)
T 3kly_A 69 LGGLAFSLGLILVVITGGELFTSSVL---ILV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQL 144 (280)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHH
T ss_pred HHHHHHHHHHHHHHHccccccccchH---HHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHH
Confidence 34666777777776665554 44333 232 34578889888766655555555555444333321 000 00 0
Q ss_pred cc-------cCCCCCchhhHHHHHHHHHHHHHHHHhh
Q 023184 159 AG-------TLPAGSNIQAFVMEFIITFYLMFVISGV 188 (286)
Q Consensus 159 ~~-------~~p~~~~~~~~~~E~~~Tf~l~~~v~~~ 188 (286)
.. .--..+..+.|+-=.+|.++..+.++..
T Consensus 145 ~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 145 GLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp HHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 1112366777888888999988887764
Done!