Query 023187
Match_columns 286
No_of_seqs 209 out of 1408
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 09:05:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023187.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023187hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03176 AllC allantoate amid 100.0 6.8E-51 1.5E-55 381.3 29.4 260 1-285 28-288 (406)
2 PRK13799 unknown domain/N-carb 100.0 8.3E-49 1.8E-53 381.7 28.5 264 1-285 209-473 (591)
3 PRK13590 putative bifunctional 100.0 2.7E-48 5.8E-53 378.4 29.6 262 1-285 209-471 (591)
4 PRK12891 allantoate amidohydro 100.0 1.6E-47 3.5E-52 359.7 28.4 258 1-284 35-293 (414)
5 TIGR01879 hydantase amidase, h 100.0 1.1E-45 2.5E-50 345.8 29.0 260 1-284 26-286 (401)
6 PRK12892 allantoate amidohydro 100.0 7.8E-43 1.7E-47 327.6 29.2 259 1-284 34-294 (412)
7 PRK12890 allantoate amidohydro 100.0 2.7E-42 5.9E-47 324.2 29.4 260 1-284 33-295 (414)
8 PRK12893 allantoate amidohydro 100.0 5.8E-41 1.3E-45 315.0 27.6 257 1-284 35-293 (412)
9 PRK09290 allantoate amidohydro 100.0 3.9E-40 8.4E-45 309.6 29.5 262 1-284 32-294 (413)
10 PLN02693 IAA-amino acid hydrol 100.0 5.9E-33 1.3E-37 262.1 25.3 218 1-284 62-295 (437)
11 PRK06915 acetylornithine deace 100.0 6E-32 1.3E-36 254.7 23.9 220 1-285 32-294 (422)
12 PLN02280 IAA-amino acid hydrol 100.0 6.2E-32 1.3E-36 257.1 24.1 216 1-284 112-345 (478)
13 PRK07473 carboxypeptidase; Pro 100.0 5E-32 1.1E-36 251.6 22.9 208 2-284 27-260 (376)
14 PRK08588 succinyl-diaminopimel 100.0 8.3E-32 1.8E-36 250.1 23.1 214 1-285 17-256 (377)
15 PRK13009 succinyl-diaminopimel 100.0 2.3E-31 5E-36 246.8 24.6 221 1-285 17-262 (375)
16 PRK07338 hypothetical protein; 100.0 1.7E-31 3.7E-36 250.0 22.9 206 5-285 39-280 (402)
17 PRK06133 glutamate carboxypept 100.0 3.1E-31 6.6E-36 249.0 23.4 206 5-285 59-287 (410)
18 COG1473 AbgB Metal-dependent a 100.0 4.2E-31 9.1E-36 243.7 23.2 219 1-285 27-264 (392)
19 TIGR01246 dapE_proteo succinyl 100.0 1.2E-30 2.6E-35 241.8 26.3 221 1-285 14-259 (370)
20 PRK06837 acetylornithine deace 100.0 4.1E-31 8.9E-36 249.4 23.4 221 1-284 35-298 (427)
21 TIGR01883 PepT-like peptidase 100.0 1.9E-31 4E-36 246.3 20.6 207 1-284 15-247 (361)
22 TIGR03320 ygeY M20/DapE family 100.0 7E-31 1.5E-35 245.4 23.3 214 1-285 28-264 (395)
23 PRK13004 peptidase; Reviewed 100.0 1.4E-30 3.1E-35 243.7 23.8 214 1-285 30-266 (399)
24 PRK07906 hypothetical protein; 100.0 8.9E-31 1.9E-35 247.0 22.2 235 3-284 22-308 (426)
25 PRK13013 succinyl-diaminopimel 100.0 3.6E-30 7.8E-35 242.9 25.2 224 4-285 35-301 (427)
26 TIGR01910 DapE-ArgE acetylorni 100.0 1.6E-30 3.5E-35 241.3 21.6 219 2-285 17-265 (375)
27 TIGR01900 dapE-gram_pos succin 100.0 3.5E-30 7.6E-35 239.0 23.9 218 1-285 11-264 (373)
28 PRK07522 acetylornithine deace 100.0 1.6E-30 3.4E-35 242.0 21.2 219 2-285 20-265 (385)
29 TIGR01891 amidohydrolases amid 100.0 5E-30 1.1E-34 237.2 23.9 219 1-284 14-249 (363)
30 TIGR03526 selenium_YgeY putati 100.0 5.1E-30 1.1E-34 239.6 23.6 214 1-285 28-264 (395)
31 PRK08652 acetylornithine deace 100.0 4.3E-30 9.3E-35 235.7 21.8 202 1-285 17-234 (347)
32 PRK00466 acetyl-lysine deacety 100.0 5.6E-30 1.2E-34 235.3 21.3 196 2-285 26-234 (346)
33 TIGR01892 AcOrn-deacetyl acety 100.0 1.6E-29 3.5E-34 233.3 23.2 211 5-285 17-255 (364)
34 PRK09133 hypothetical protein; 100.0 1.8E-29 3.8E-34 241.2 22.9 234 3-285 56-351 (472)
35 PRK05111 acetylornithine deace 100.0 1.8E-29 3.9E-34 234.8 21.8 211 5-285 31-268 (383)
36 PRK13007 succinyl-diaminopimel 100.0 7.6E-29 1.6E-33 228.1 24.7 213 1-285 22-250 (352)
37 PRK13381 peptidase T; Provisio 100.0 5.5E-29 1.2E-33 233.3 23.0 204 3-284 28-283 (404)
38 PRK08596 acetylornithine deace 100.0 1.1E-28 2.4E-33 232.5 25.0 216 3-285 33-285 (421)
39 PRK13983 diaminopimelate amino 100.0 7.2E-29 1.6E-33 231.8 22.9 222 4-285 28-283 (400)
40 TIGR01893 aa-his-dipept aminoa 100.0 4.2E-29 9.1E-34 238.8 19.6 213 2-284 20-267 (477)
41 PRK08737 acetylornithine deace 100.0 7.8E-29 1.7E-33 229.2 20.2 201 4-285 28-252 (364)
42 PRK04443 acetyl-lysine deacety 100.0 2.7E-28 5.9E-33 224.4 22.7 205 2-285 22-239 (348)
43 PRK06446 hypothetical protein; 100.0 3.9E-28 8.4E-33 229.8 22.3 228 6-285 25-315 (436)
44 TIGR01880 Ac-peptdase-euk N-ac 100.0 7.2E-28 1.6E-32 225.4 23.8 226 4-285 29-280 (400)
45 TIGR01902 dapE-lys-deAc N-acet 100.0 1.4E-27 3E-32 218.6 23.2 200 2-285 13-225 (336)
46 TIGR01882 peptidase-T peptidas 100.0 2.6E-28 5.6E-33 229.2 18.6 204 3-285 31-288 (410)
47 PRK05469 peptidase T; Provisio 100.0 1E-27 2.3E-32 225.0 22.2 205 3-285 29-286 (408)
48 COG0624 ArgE Acetylornithine d 100.0 1.3E-27 2.8E-32 224.4 21.7 218 3-285 31-289 (409)
49 PRK08201 hypothetical protein; 100.0 1.7E-27 3.7E-32 226.6 22.5 234 3-285 37-334 (456)
50 PRK08262 hypothetical protein; 100.0 2.1E-27 4.6E-32 227.6 23.2 236 7-285 74-364 (486)
51 PRK08651 succinyl-diaminopimel 100.0 3.4E-27 7.4E-32 220.3 21.7 213 3-285 26-273 (394)
52 PRK07907 hypothetical protein; 100.0 3.8E-27 8.2E-32 223.8 22.3 230 4-285 42-326 (449)
53 PRK09104 hypothetical protein; 100.0 3.7E-27 8E-32 224.7 21.6 232 5-285 42-342 (464)
54 PRK15026 aminoacyl-histidine d 99.9 1.1E-26 2.4E-31 221.6 20.9 204 2-283 26-272 (485)
55 KOG2275 Aminoacylase ACY1 and 99.9 3.8E-26 8.2E-31 206.1 20.5 221 7-284 49-296 (420)
56 PRK07318 dipeptidase PepV; Rev 99.9 9.5E-26 2.1E-30 215.1 21.9 245 4-285 44-354 (466)
57 PRK07205 hypothetical protein; 99.9 2.8E-25 6E-30 210.8 22.6 239 6-285 41-331 (444)
58 TIGR01886 dipeptidase dipeptid 99.9 1.6E-24 3.5E-29 206.6 25.3 240 3-285 42-354 (466)
59 PRK07079 hypothetical protein; 99.9 4.5E-25 9.7E-30 210.7 21.2 231 4-285 38-337 (469)
60 TIGR01887 dipeptidaselike dipe 99.9 2.9E-24 6.3E-29 203.6 23.6 241 4-285 32-341 (447)
61 PRK06156 hypothetical protein; 99.9 8.5E-22 1.8E-26 190.2 22.4 98 6-114 75-200 (520)
62 PRK08554 peptidase; Reviewed 99.8 2.4E-19 5.3E-24 169.7 19.5 89 5-100 26-138 (438)
63 PRK10199 alkaline phosphatase 99.6 6.4E-15 1.4E-19 133.5 12.4 103 2-115 51-188 (346)
64 PF07687 M20_dimer: Peptidase 99.6 6.5E-15 1.4E-19 113.0 9.5 90 182-284 1-90 (111)
65 COG4187 RocB Arginine degradat 99.4 1.2E-11 2.6E-16 112.9 14.2 181 2-225 26-262 (553)
66 KOG2276 Metalloexopeptidases [ 99.3 3.6E-11 7.7E-16 108.8 15.9 175 4-225 40-252 (473)
67 COG2195 PepD Di- and tripeptid 99.3 1.3E-12 2.9E-17 121.3 5.2 205 2-284 21-292 (414)
68 TIGR03106 trio_M42_hydro hydro 99.3 3.4E-11 7.4E-16 110.4 11.7 97 1-100 18-220 (343)
69 TIGR03107 glu_aminopep glutamy 99.2 1.3E-10 2.9E-15 106.6 10.6 110 1-119 13-227 (350)
70 COG1363 FrvX Cellulase M and r 99.2 1.4E-10 3.1E-15 105.6 10.3 109 1-119 17-229 (355)
71 PRK09961 exoaminopeptidase; Pr 99.2 2E-10 4.2E-15 105.6 11.0 107 1-118 15-214 (344)
72 PRK09864 putative peptidase; P 99.0 2.2E-09 4.8E-14 98.5 10.5 105 1-119 15-222 (356)
73 PF01546 Peptidase_M20: Peptid 98.9 2.6E-09 5.6E-14 89.2 7.2 62 46-113 1-82 (189)
74 PF04389 Peptidase_M28: Peptid 98.7 2E-08 4.3E-13 83.6 5.6 64 44-114 2-72 (179)
75 KOG2194 Aminopeptidases of the 98.5 5E-07 1.1E-11 89.5 9.6 107 4-117 79-212 (834)
76 PF05343 Peptidase_M42: M42 gl 98.1 9.8E-06 2.1E-10 72.9 6.8 48 60-116 133-180 (292)
77 COG2234 Iap Predicted aminopep 97.9 4.5E-05 9.7E-10 72.3 8.1 67 42-117 208-275 (435)
78 KOG2195 Transferrin receptor a 97.7 0.00012 2.7E-09 72.6 8.3 82 25-114 335-419 (702)
79 KOG3946 Glutaminyl cyclase [Po 97.4 0.00076 1.6E-08 59.1 8.5 112 2-115 68-200 (338)
80 PF05450 Nicastrin: Nicastrin; 96.1 0.021 4.5E-07 49.7 7.3 67 43-114 1-73 (234)
81 COG4882 Predicted aminopeptida 94.5 0.13 2.8E-06 47.1 6.8 79 29-117 179-261 (486)
82 KOG2526 Predicted aminopeptida 91.6 0.74 1.6E-05 43.2 7.4 81 29-114 194-287 (555)
83 PF09940 DUF2172: Domain of un 81.5 3.6 7.9E-05 38.1 5.8 77 21-114 104-186 (386)
84 PF00883 Peptidase_M17: Cytoso 81.4 21 0.00045 32.5 10.5 90 6-99 18-141 (311)
85 cd00433 Peptidase_M17 Cytosol 80.8 20 0.00044 34.6 10.8 87 7-99 175-296 (468)
86 PF04114 Gaa1: Gaa1-like, GPI 80.5 5.3 0.00011 38.9 6.9 74 29-116 4-78 (504)
87 PRK00913 multifunctional amino 80.1 17 0.00036 35.2 10.0 87 7-99 192-310 (483)
88 KOG3566 Glycosylphosphatidylin 79.5 9.4 0.0002 37.3 8.0 91 10-115 92-193 (617)
89 PTZ00412 leucyl aminopeptidase 68.7 66 0.0014 31.7 10.8 86 8-99 234-355 (569)
90 PRK02256 putative aminopeptida 54.9 21 0.00045 34.4 4.8 39 56-100 255-293 (462)
91 KOG2597 Predicted aminopeptida 45.6 1.5E+02 0.0032 29.0 8.8 88 7-100 210-332 (513)
92 PRK05015 aminopeptidase B; Pro 42.9 3.1E+02 0.0066 26.2 10.7 35 61-100 214-248 (424)
93 COG1362 LAP4 Aspartyl aminopep 36.6 97 0.0021 29.4 6.0 52 2-53 20-89 (437)
94 COG0260 PepB Leucyl aminopepti 34.8 3E+02 0.0064 26.8 9.1 34 61-99 276-309 (485)
95 KOG2657 Transmembrane glycopro 33.9 1.2E+02 0.0027 29.5 6.3 80 29-113 158-248 (596)
96 COG1360 MotB Flagellar motor p 33.0 1.7E+02 0.0036 25.5 6.7 53 44-98 165-219 (244)
97 COG4310 Uncharacterized protei 32.5 1.4E+02 0.0029 27.4 6.0 72 16-95 148-225 (435)
98 PF03738 GSP_synth: Glutathion 31.3 1E+02 0.0022 22.6 4.3 30 2-31 10-39 (97)
99 PTZ00371 aspartyl aminopeptida 31.2 74 0.0016 30.7 4.5 42 57-100 247-289 (465)
100 PRK02813 putative aminopeptida 29.2 56 0.0012 31.1 3.3 36 59-101 232-267 (428)
101 PRK09038 flagellar motor prote 28.9 4.2E+02 0.0091 23.6 10.1 54 43-99 164-220 (281)
102 PRK06778 hypothetical protein; 28.6 1.2E+02 0.0026 27.2 5.2 51 43-96 183-236 (289)
103 PTZ00371 aspartyl aminopeptida 27.8 1.9E+02 0.0042 27.8 6.7 52 2-53 19-89 (465)
104 PRK08944 motB flagellar motor 27.4 4.7E+02 0.01 23.6 10.1 54 43-99 210-267 (302)
105 PRK07033 hypothetical protein; 27.0 5.6E+02 0.012 24.4 10.3 54 43-99 345-401 (427)
106 COG4635 HemG Flavodoxin [Energ 27.0 65 0.0014 26.4 2.8 25 3-27 12-36 (175)
107 PRK02813 putative aminopeptida 26.3 2.1E+02 0.0046 27.2 6.6 53 2-54 18-88 (428)
108 PRK06667 motB flagellar motor 26.3 2.4E+02 0.0052 24.6 6.6 54 43-98 160-217 (252)
109 PRK08126 hypothetical protein; 26.0 5.8E+02 0.012 24.4 9.5 53 43-98 354-409 (432)
110 TIGR03350 type_VI_ompA type VI 25.7 2.2E+02 0.0047 22.1 5.7 53 43-98 61-116 (137)
111 PF01726 LexA_DNA_bind: LexA D 24.1 86 0.0019 21.3 2.6 25 1-25 4-28 (65)
112 smart00853 MutL_C MutL C termi 23.8 1.7E+02 0.0037 22.3 4.8 26 1-26 61-86 (136)
113 cd02412 30S_S3_KH K homology R 23.7 1.9E+02 0.0041 21.7 4.8 42 4-48 34-77 (109)
114 PRK09039 hypothetical protein; 23.3 1.9E+02 0.0041 26.6 5.6 52 44-98 264-319 (343)
115 PRK02256 putative aminopeptida 22.1 2.7E+02 0.0058 26.9 6.4 52 2-53 38-104 (462)
116 PF08676 MutL_C: MutL C termin 21.9 2.1E+02 0.0045 22.2 4.9 25 1-25 60-84 (144)
117 PRK09040 hypothetical protein; 20.6 2.8E+02 0.006 23.7 5.7 52 44-98 124-180 (214)
118 PRK09041 motB flagellar motor 20.6 2.5E+02 0.0053 25.7 5.6 54 43-98 192-249 (317)
119 PRK12799 motB flagellar motor 20.3 2.9E+02 0.0062 26.4 6.1 54 43-98 187-244 (421)
No 1
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=6.8e-51 Score=381.30 Aligned_cols=260 Identities=34% Similarity=0.521 Sum_probs=233.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
||.++.++++||++||+++|+++++|..||++++++|.+++.|+|+++||+||||.||.+|++.||+++|++++.|++.+
T Consensus 28 ~s~~~~~a~~~~~~~~~~~Gl~v~~D~~gN~~~~~~g~~~~~~~i~~gsHlDtv~~gG~~dg~~Gv~~~le~~~~l~~~~ 107 (406)
T TIGR03176 28 YSPEWLAAQQQFKKRMAESGLETRFDDVGNLYGRLVGTEFPEETILTGSHIDTVVNGGNLDGQFGALAAWLAVDYLKEKY 107 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEecCCCCCCCeEEEeccccCCCCCCccCchhhHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999999999999998777899999999999999999999999999999999999998
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhccccc-chhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccc
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV-SALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~-~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~ 159 (286)
. .++++|.++++++||+++|+++++||+.+.+.+.. +.++..|.+|+++.+.|.+.||+++. +. .....+.+
T Consensus 108 ~--~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~--~~---~~~~~~~~ 180 (406)
T TIGR03176 108 G--APLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRK--AP---TVRDDIKA 180 (406)
T ss_pred C--CCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCccc--cc---ccccccce
Confidence 7 89999999999999999999999999999997665 45788999999999999999997652 11 12246889
Q ss_pred eEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 023187 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (286)
Q Consensus 160 ~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (286)
|+|+|+|||++++..+.+++++++++|..|++|+++|+++|||..||..+.|||.++++++..++++..+.
T Consensus 181 ~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~~~~--------- 251 (406)
T TIGR03176 181 FVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIERAKEI--------- 251 (406)
T ss_pred EEEEEECCCcchHHCCCeEEEEeecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---------
Confidence 99999999999999999999999999999999999999999766674356999999999999998875431
Q ss_pred CCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
.+..++|+|.|+++|++.|+||++|++++|+|+.+.+
T Consensus 252 ---------~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~ 288 (406)
T TIGR03176 252 ---------GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAA 288 (406)
T ss_pred ---------CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHH
Confidence 1346899999997668999999999999999998653
No 2
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=8.3e-49 Score=381.70 Aligned_cols=264 Identities=41% Similarity=0.648 Sum_probs=235.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHc
Q 023187 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST 79 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~ 79 (286)
||.++.++++||.+||+++|++ +++|.+|||+++++|.+++.|+|+++||+||||.+|.+|+..||+++|++++.|++.
T Consensus 209 ~s~~~~~~~~~~~~~~~~~Gl~~v~~D~~gNv~~~~~g~~~~~p~v~~gSHlDTV~~gG~~DG~~Gv~a~l~~~~~l~~~ 288 (591)
T PRK13799 209 LSDAHRACANQISDWMRDAGFDEVEIDAVGNVVGRYKAADDDAKTLITGSHYDTVRNGGKYDGREGIFLAIACVKELHEQ 288 (591)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCeEeECCCCCEEEEcCCCCCCCCeEEEeccccccCCCCccccHHHHHHHHHHHHHHHHc
Confidence 6889999999999999999998 999999999999998766789999999999999999999999999999999999999
Q ss_pred CCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccc
Q 023187 80 GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (286)
Q Consensus 80 ~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~ 159 (286)
++ +++++|.|+++++||+.+|+++|+||+.+++.+..+.++.+|.+|+++.+.|.+.|+.++. +.+....+..+.+
T Consensus 289 ~~--~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~--~~~~~~~~~~~~a 364 (591)
T PRK13799 289 GE--RLPFHFEVIAFAEEEGQRFKATFLGSGALIGDFNMELLDIKDADGISLREAIQHAGHCIDA--IPKIARDPADVLG 364 (591)
T ss_pred CC--CCCCCeEEEEecCCCccCCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhh--ccccccCCCCccE
Confidence 98 8999999999999999999999999999999776677788899999999999999997642 1111122357889
Q ss_pred eEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 023187 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (286)
Q Consensus 160 ~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (286)
|||+|||||++|+..+.++|++++++|..|++|+|+|+++|||..||+.|.|||.++++++..++++..+.
T Consensus 365 ~~ElHIEQgp~Le~~~~~igvV~g~~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--------- 435 (591)
T PRK13799 365 FIEVHIEQGPVLLELDIPLGIVTSIAGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--------- 435 (591)
T ss_pred EEEEEeCCCHHHHHCCCcEEEEeeeccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc---------
Confidence 99999999999999999999999999999999999999999877787679999999999999999876531
Q ss_pred CCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+. +..++++|.|++++++.|+||++|++++|+|+.+.+
T Consensus 436 -------~~-~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e 473 (591)
T PRK13799 436 -------QH-ASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDE 473 (591)
T ss_pred -------CC-CCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHH
Confidence 11 335789999998767999999999999999998753
No 3
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=2.7e-48 Score=378.38 Aligned_cols=262 Identities=37% Similarity=0.620 Sum_probs=233.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCC-EEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHc
Q 023187 1 MSPASVRAGNLIRQWMEDAGL-RTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST 79 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~-~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~ 79 (286)
||.++.++++||++||+++|+ ++++|..||++++++|.+++.|+|+++||+||||.+|.+||++||+++|++++.|++.
T Consensus 209 ~s~~~~~~~~~l~~~~~~~Gl~~v~~D~~GNl~~~~~g~~~~~~~v~~gsHlDTV~~gG~~DG~~Gv~a~lea~~~l~~~ 288 (591)
T PRK13590 209 LTDAHRACAQQISHWMRDCGFDEVHIDAVGNVVGRYKGSTPQAKRLLTGSHYDTVRNGGKYDGRLGIFVPMACVRELHRQ 288 (591)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCeeeECCCCCEEEEecCCCCCCCeEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHc
Confidence 588999999999999999999 9999999999999998766679999999999999999999999999999999999999
Q ss_pred CCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccc
Q 023187 80 GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (286)
Q Consensus 80 ~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~ 159 (286)
++ .++++|.|+++++||+++|+++++||+.+.+.++.+.++.+|.+|+++.+.|.+.||.++. +.+....++.+.+
T Consensus 289 ~~--~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~--~~~~~~~~~~~~a 364 (591)
T PRK13590 289 GR--RLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFDPAWLDQKDADGITMREAMQHAGLCIDD--IPKLRRDPARYLG 364 (591)
T ss_pred CC--CCCCCeEEEEecCCccccCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhh--ccccccCCCCccE
Confidence 98 7889999999999999999999999999999766677788899999999999999997642 2222334567889
Q ss_pred eEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 023187 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (286)
Q Consensus 160 ~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (286)
|||+|+|||++++..+.+++++++++|..+++|+|+|+++|||+.||..+.|||.++++++..++++...
T Consensus 365 ~~ElHiEqg~~Le~~~~~~gvV~~~~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~---------- 434 (591)
T PRK13590 365 FVEVHIEQGPVLNELDLPLGIVTSINGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ---------- 434 (591)
T ss_pred EEEEEeCCCHHHHHCCCceEEEeeeeccEEEEEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----------
Confidence 9999999999999999999999999999999999999999987778656899999999999999986432
Q ss_pred CCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
.+..++|+|.|+.+|++.||||++|++++|+|+.+.+
T Consensus 435 ---------~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e 471 (591)
T PRK13590 435 ---------DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDA 471 (591)
T ss_pred ---------CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHH
Confidence 1234789999987447999999999999999998753
No 4
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.6e-47 Score=359.68 Aligned_cols=258 Identities=33% Similarity=0.542 Sum_probs=228.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
+|++|.++++||+++|+++|++++++..+|++++++|..++.|+|+|+||+||||.+|.+|||+|++++|++++.|++.+
T Consensus 35 ~~~~e~~~~~~l~~~l~~~G~~v~~~~~gNl~a~~~g~~~~~~~l~~~~H~DtVp~gg~~D~k~Gv~a~l~a~~~l~~~~ 114 (414)
T PRK12891 35 LTDGDREARDLFVAWARDAGCTVRVDAMGNLFARRAGRDPDAAPVMTGSHADSQPTGGRYDGIYGVLGGLEVVRALNDAG 114 (414)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEecCCCCCCCeEEEEecccCCCCCccccchhhHHHHHHHHHHHHHcC
Confidence 58899999999999999999999999999999999886444689999999999999999999999999999999999999
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccc-hhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccc
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVS-ALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~-~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~ 159 (286)
. .++++|.|++++|||+++|+.+++||+.+.+.+..+ .++.+|.+++.+.+.|.+.|+.+|...+. ..+.+
T Consensus 115 ~--~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~ 186 (414)
T PRK12891 115 I--ETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAEPVGG------YPVHA 186 (414)
T ss_pred C--CCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCccccccc------CCCCE
Confidence 8 889999999999999999999999999998876654 45778899999999999999876543322 35668
Q ss_pred eEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 023187 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (286)
Q Consensus 160 ~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (286)
|+|+|+||+++++..+...+++++++|..|++|+++|+++||++.|++.|.|||.+++++|.+|+++....
T Consensus 187 ~~e~h~e~g~vle~~~~~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~~--------- 257 (414)
T PRK12891 187 AYELHIEQGAILERAGKTIGVVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGRRD--------- 257 (414)
T ss_pred EEEEEeCCCHHHHHCCCcEEEEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---------
Confidence 99999999999999888889999999999999999999999766883368999999999999999876531
Q ss_pred CCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
.++.++|+|.|++|+.+.|+||++|++++|+|+++.
T Consensus 258 ---------~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~ 293 (414)
T PRK12891 258 ---------APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDD 293 (414)
T ss_pred ---------CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCH
Confidence 135689999999975689999999999999999865
No 5
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=1.1e-45 Score=345.85 Aligned_cols=260 Identities=38% Similarity=0.628 Sum_probs=223.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
+|++|.++++||+++|+++|++++++..+||+++++|+.++.|+|+++||+||||.+|.+|++.|++++|++++.|++.+
T Consensus 26 ~~~~e~~~~~~l~~~~~~~G~~~~~~~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~gg~~dg~~gvaa~l~a~~~l~~~g 105 (401)
T TIGR01879 26 LSPEDREAQDLFKKRMRAAGLEVRFDEVGNLIGRKEGTEPPLEVVLSGSHIDTVVNGGNFDGQLGVLAGIEVVDALKEAY 105 (401)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEecCCcEEEEecCCCCCCCEEEEecccccCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 58899999999999999999999999999999999886544689999999999999999999999999999999999999
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchh-cccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccc
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~-~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~ 159 (286)
+ .++++|.|++++|||+++|+.+++||+.+++....+.+ ...|.+|+.+.+.|.+.|+.. ..+.++ .+..+.+
T Consensus 106 ~--~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~--~~~~~~--~~~~~~~ 179 (401)
T TIGR01879 106 V--VPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDL--PNQPLR--PRGDIKA 179 (401)
T ss_pred C--CCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCc--cccccc--ccccccE
Confidence 8 89999999999999998999999999999876544333 345667888888888888532 222221 1235678
Q ss_pred eEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 023187 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (286)
Q Consensus 160 ~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (286)
|+|+|+|||++++..+...+++++++|..|++|+++|+++|+++.||..|.|||.++++++.+|+++..+.
T Consensus 180 ~~e~Hieqg~~l~~~g~~~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~~~~--------- 250 (401)
T TIGR01879 180 YVELHIEQGPVLESNGQPIGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKAKRM--------- 250 (401)
T ss_pred EEEEEEcCCcChhhCCCeEEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---------
Confidence 99999999999999999999999999999999999999999766774468999999999999999876542
Q ss_pred CCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
..+.+.++|.|++|+.+.|+||++|++.+|+|+.+.
T Consensus 251 ---------~~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~ 286 (401)
T TIGR01879 251 ---------GDPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDA 286 (401)
T ss_pred ---------CCCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCH
Confidence 134578999999976789999999999999999864
No 6
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=7.8e-43 Score=327.65 Aligned_cols=259 Identities=39% Similarity=0.620 Sum_probs=220.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
+|++|.++++||+++|+++|++++++..+|++++++|..+ .|+|+|+||+||||.+|..|+++|++++|++++.|++.+
T Consensus 34 ~~~~e~~~~~~l~~~l~~~G~~~~~~~~~nl~a~~~g~~~-~~~l~l~gH~DtVp~~g~~dg~~Gvaa~l~a~~~l~~~~ 112 (412)
T PRK12892 34 YSDAHVAARRRLAAWCEAAGLAVRIDGIGNVFGRLPGPGP-GPALLVGSHLDSQNLGGRYDGALGVVAGLEAARALNEHG 112 (412)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEecCCCC-CCeEEEEccccCCCCCCcccchHHHHHHHHHHHHHHHcC
Confidence 3678999999999999999999999888999999987544 489999999999999999999999999999999999998
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccch-hcccC-CCCCcHHHHHHhCCCChhhHHhhhccCCCcccc
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSA-LRVSD-KSGVTVLDALRENSIDIAEESLLQLKYDPASVW 158 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~-~~~~~-~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~ 158 (286)
. .++++|.|++++|||+++|+.++.|++.+.+.+..+. +...+ .++..+.+.+.+.|+.+|...+.| |....
T Consensus 113 ~--~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~e----p~~~~ 186 (412)
T PRK12892 113 I--ATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALAARCRSDGVPLRDALAAAGLAGRPRPAAD----RARPK 186 (412)
T ss_pred C--CCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHhCccCCCCcCHHHHHHHcCCChhhccccc----ccCcc
Confidence 7 7899999999999999888888889999987554321 22222 345677788888999888766554 34567
Q ss_pred ceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 023187 159 GYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDG 238 (286)
Q Consensus 159 ~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~ 238 (286)
+++|+|+++++.+++.+...+++++++|..|++|+++|+++|+++.|++.|.|||.++++++.+|+++....
T Consensus 187 ~~~e~~~~~g~~~e~~~~~~~i~~~~kG~~~~~i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~l~~~~~~~-------- 258 (412)
T PRK12892 187 GYLEAHIEQGPVLEQAGLPVGVVTGIVGIWQYRITVTGEAGHAGTTPMALRRDAGLAAAEMIAAIDEHFPRV-------- 258 (412)
T ss_pred EEEEEEeccCHhHhhCCCcEEEEEEeccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc--------
Confidence 899999999999988877778899999999999999999999766783368999999999999999875431
Q ss_pred CCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 239 RSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
..+.++++|.|++|+++.|+||++|++++|+|+.+.
T Consensus 259 ----------~~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~ 294 (412)
T PRK12892 259 ----------CGPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSP 294 (412)
T ss_pred ----------CCCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCH
Confidence 134789999999875799999999999999999864
No 7
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.7e-42 Score=324.25 Aligned_cols=260 Identities=42% Similarity=0.667 Sum_probs=220.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
+|++|.++++||.++|+++|++++++..+|++++++|..++.|.|+|+||+||||.+|..|||+|++++|++++.|++.+
T Consensus 33 ~~~~e~~~~~~l~~~l~~~G~~~~~~~~~nlia~~~g~~~~~~~l~~~~H~DtVp~~g~~D~~~g~aa~l~a~~~l~~~~ 112 (414)
T PRK12890 33 LSDEERAARALLAAWMRAAGLEVRRDAAGNLFGRLPGRDPDLPPLMTGSHLDTVPNGGRYDGILGVLAGLEVVAALREAG 112 (414)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEcCCCcEEEEeCCCCCCCCEEEEeCcccCCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999988889999999875445689999999999999999999999999999999999988
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhccccc-chhcccCCCCCcHHHHHHhCCCChhhHHh--hhccCCCccc
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV-SALRVSDKSGVTVLDALRENSIDIAEESL--LQLKYDPASV 157 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~-~~~~~~~~~g~~~~~~l~~~g~~~d~~~~--~~~~~~~~~i 157 (286)
. .++++|.|++++|||+++|+.++.|++.+.+.+.. +.++..+.++..+.+++.+.|+.+|...+ .+ |..+
T Consensus 113 ~--~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e----p~~~ 186 (414)
T PRK12890 113 I--RPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGGDPDALPGALRP----PGAV 186 (414)
T ss_pred C--CCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCCChhhccccccC----CCCc
Confidence 6 78999999999999998888889999998876653 33455566778888888889987764322 22 3456
Q ss_pred cceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccC
Q 023187 158 WGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYD 237 (286)
Q Consensus 158 ~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~ 237 (286)
.+|+++|+++|+.++..+...+++.+++|..|++|+++|+++|+++.|.+.|.|||.++++++.+|+++..+.
T Consensus 187 ~~~~~~h~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~~l~~~~~~~------- 259 (414)
T PRK12890 187 AAFLELHIEQGPVLEAEGLPIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELVTAMERRARAL------- 259 (414)
T ss_pred cEEEEEeeCcCHHHHhCCCceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHHHHHHHHHHhc-------
Confidence 7889999999998887776777889999999999999999999655683345899999999999999976542
Q ss_pred CCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 238 GRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
.+..++++|.|++|+.+.|+||++|++++|+|+.+.
T Consensus 260 -----------~~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~ 295 (414)
T PRK12890 260 -----------LHDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDD 295 (414)
T ss_pred -----------CCCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCH
Confidence 135688999999865899999999999999999864
No 8
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=5.8e-41 Score=315.00 Aligned_cols=257 Identities=41% Similarity=0.683 Sum_probs=213.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
.|++|.++++||+++|+++|++++++..+|++++++|..+..|.|+|+||+||||.+|..|+|+|++++|++++.|++.+
T Consensus 35 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~~a~~~g~~~~~~~l~l~~H~DtVp~~g~~dgk~gvaa~l~a~~~l~~~~ 114 (412)
T PRK12893 35 LTDEDREARDLLAQWMEEAGLTVSVDAIGNLFGRRAGTDPDAPPVLIGSHLDTQPTGGRFDGALGVLAALEVVRTLNDAG 114 (412)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEeCCCCCCCCEEEEEecccCCCCCCcccchhhHHHHHHHHHHHHHcC
Confidence 37889999999999999999999988788999999875433589999999999999999999999999999999999988
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchh-cccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccc
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~-~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~ 159 (286)
. .++++|.|+|++|||+++++.++.|++.+.+.+..+.+ ...+.++..+.+.+.+.++.|+...+ ++.+.+
T Consensus 115 ~--~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 186 (412)
T PRK12893 115 I--RTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDALARRDADGITLGEALARIGYRGTARVG------RRAVDA 186 (412)
T ss_pred C--CCCCCeEEEEEccccccccccccccHHHHhCcCChHHHHhccCCCCCCHHHHHHHcCCCcccccc------cCCccE
Confidence 6 78999999999999998777788999988765544332 22334556667777777776542111 234668
Q ss_pred eEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 023187 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAELIVLLERLCKHPKDFLSYDG 238 (286)
Q Consensus 160 ~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~-~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~ 238 (286)
++++|+++|+.++.......+++++||..|++|+++|+++|+++.| + .|+|||.++++++.+|+++..+.
T Consensus 187 ~~~~~~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~G~~aHas~~p-~~~G~NAI~~a~~~i~~l~~~~~~~-------- 257 (412)
T PRK12893 187 YLELHIEQGPVLEAEGLPIGVVTGIQGIRWLEVTVEGQAAHAGTTP-MAMRRDALVAAARIILAVERIAAAL-------- 257 (412)
T ss_pred EEEEEeccCHHHHHCCCcEEEEeeecccEEEEEEEEEECCCcCCCc-chhccCHHHHHHHHHHHHHHHHHhc--------
Confidence 9999999998887776667788999999999999999999965568 6 79999999999999999876532
Q ss_pred CCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 239 RSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
.+..++++|.|++|+++.|+||++|++++|+|+.+.
T Consensus 258 ----------~~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~ 293 (412)
T PRK12893 258 ----------APDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDD 293 (412)
T ss_pred ----------CCCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCH
Confidence 134688999999865799999999999999999864
No 9
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.9e-40 Score=309.58 Aligned_cols=262 Identities=43% Similarity=0.712 Sum_probs=213.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
.|++|.++++||+++|+++|++++++..+|++++++|..+..|.|+|+||+||||.+|..|||+|+++++++++.|++.+
T Consensus 32 ~s~~e~~~a~~l~~~l~~~g~~~~~~~~~nl~a~~~g~~~~~~~l~l~gH~DtVp~~g~~d~k~g~aa~l~a~~~l~~~~ 111 (413)
T PRK09290 32 LSPEDLQARDLFAEWMEAAGLTVRVDAVGNLFGRLEGRDPDAPAVLTGSHLDTVPNGGRFDGPLGVLAGLEAVRTLNERG 111 (413)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEecCCCCCCCEEEEecCccCCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 37899999999999999999999988888999999764323589999999999999999999999999999999999988
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchh-cccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccc
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~-~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~ 159 (286)
. +++++|.|+|++|||.++|+.++.|++.+.+.+..+.+ ...+.++..+.+.|.+.|+.+|..++.+ ..|..+.+
T Consensus 112 ~--~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~--~ept~~~~ 187 (413)
T PRK09290 112 I--RPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDALALRDADGVSFAEALAAIGYDGDEAVGAA--RARRDIKA 187 (413)
T ss_pred C--CCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHHHhccCCCCCCHHHHHHHcCCChhhccccc--cCCCCccE
Confidence 7 78899999999999987677678899988765443322 1234455667777778888776533220 01345567
Q ss_pred eEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 023187 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (286)
Q Consensus 160 ~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (286)
++++|++++.++++++....++.++||..|++|+++|+++|+++.|.+.|.|||.++++++.+|+++..+.
T Consensus 188 ~~~~~~~~~~~~e~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~--------- 258 (413)
T PRK09290 188 FVELHIEQGPVLEAEGLPIGVVTGIVGQRRYRVTFTGEANHAGTTPMALRRDALLAAAEIILAVERIAAAH--------- 258 (413)
T ss_pred EEEEEeccCHHHHHCCCcEEEEeeeeccEEEEEEEEEECCCCCCCCchhccCHHHHHHHHHHHHHHHHHhc---------
Confidence 78899988888887776667889999999999999999999644783378999999999999999876431
Q ss_pred CCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
.++.+++++.|++++.+.|+||++|++.+|+|+.+.
T Consensus 259 ---------~~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~ 294 (413)
T PRK09290 259 ---------GPDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDD 294 (413)
T ss_pred ---------CCCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCH
Confidence 134688999999765789999999999999999864
No 10
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=5.9e-33 Score=262.08 Aligned_cols=218 Identities=21% Similarity=0.318 Sum_probs=166.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE-cccccEEEEEcCCCCCCCEEEeeccCCCCCCC------------C---CCccHH
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWV-DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------G---IFDGSL 64 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~-~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------g---~~D~k~ 64 (286)
+|++|.++++||+++|+++|++++. +...|++|++.+ . ..|.|+|.||+|+||.. | ++|+|+
T Consensus 62 ~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~-~-~g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg 139 (437)
T PLN02693 62 LGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGT-G-EPPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDG 139 (437)
T ss_pred CCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECC-C-CCCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchH
Confidence 5899999999999999999999764 345789999842 2 35899999999999853 1 456788
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhh
Q 023187 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (286)
Q Consensus 65 gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~ 144 (286)
++++++++++.|++.+. .++++|.|+|++|||+.+ |++.+. +.|+..
T Consensus 140 ~~A~~l~Aa~~L~~~~~--~~~g~V~~if~pdEE~~~------Ga~~~i-----------------------~~g~~~-- 186 (437)
T PLN02693 140 HVAMLLGAAKILQEHRH--HLQGTVVLIFQPAEEGLS------GAKKMR-----------------------EEGALK-- 186 (437)
T ss_pred HHHHHHHHHHHHHhCcc--cCCceEEEEEEEcccchh------hHHHHH-----------------------HCCCCC--
Confidence 88899999999998765 578899999999999632 777542 233321
Q ss_pred HHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 023187 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (286)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~ 224 (286)
..++.+-.|.++....+......|.. ++|..+++|+++|+++| ++.| +.|+|||.+++++|.+|+
T Consensus 187 -----------~~~~iig~h~~p~~~~g~~~~~~g~~--~~G~~~~~i~v~Gk~aH-aa~P-~~G~nAI~~aa~~i~~l~ 251 (437)
T PLN02693 187 -----------NVEAIFGIHLSPRTPFGKAASRAGSF--MAGAGVFEAVITGKGGH-AAIP-QHTIDPVVAASSIVLSLQ 251 (437)
T ss_pred -----------CCCEEEEEecCCCCCCeeEEeccCcc--cccceEEEEEEEccccc-CCCC-CCCcCHHHHHHHHHHHHH
Confidence 11233446777653222111112222 68999999999999999 5789 999999999999999999
Q ss_pred HHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
++..+.. ++. .+.++++|.|+|| .+.|+||++|++++|+|+.+.
T Consensus 252 ~~~~~~~--------------~~~-~~~ti~vg~i~GG-~~~NvVPd~a~~~~diR~~~~ 295 (437)
T PLN02693 252 QLVSRET--------------DPL-DSKVVTVSKVNGG-NAFNVIPDSITIGGTLRAFTG 295 (437)
T ss_pred HHhcccC--------------CCC-CCcEEEEEEEEcC-CCCceECCeEEEEEEEecCCH
Confidence 9854321 122 4579999999999 999999999999999999863
No 11
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=6e-32 Score=254.68 Aligned_cols=220 Identities=18% Similarity=0.246 Sum_probs=166.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---------------------ccccEEEEEcCCCCCCCEEEeeccCCCCCCC--
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVD---------------------HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~---------------------~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-- 57 (286)
.|++|.++++||+++|+++|+++++. ..+||+++++|.. ..|.|+|.+|+||||.+
T Consensus 32 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~-~~~~l~l~~H~Dtvp~~~~ 110 (422)
T PRK06915 32 VSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPNIVATLKGSG-GGKSMILNGHIDVVPEGDV 110 (422)
T ss_pred CCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCceEEEEEcCCC-CCCeEEEEeeccccCCCCc
Confidence 37889999999999999999997532 2478999997753 35899999999999963
Q ss_pred --------------------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccc
Q 023187 58 --------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (286)
Q Consensus 58 --------------------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (286)
|..|||+|++++|.+++.|++.+. +++++|.|+|++|||.++ .|+..+.
T Consensus 111 ~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~G~~~~~---- 179 (422)
T PRK06915 111 NQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGI--ELKGDVIFQSVIEEESGG-----AGTLAAI---- 179 (422)
T ss_pred ccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCC--CCCCcEEEEEecccccCC-----cchHHHH----
Confidence 455999999999999999999876 678999999999999732 2655331
Q ss_pred cchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEec
Q 023187 118 VSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS 197 (286)
Q Consensus 118 ~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~ 197 (286)
..++.+| . + +..||. + ..++.+++|..+++|+++|+
T Consensus 180 -------------------~~~~~~d------------~--~---i~~ep~------~--~~i~~~~~G~~~~~i~v~G~ 215 (422)
T PRK06915 180 -------------------LRGYKAD------------G--A---IIPEPT------N--MKFFPKQQGSMWFRLHVKGK 215 (422)
T ss_pred -------------------hcCcCCC------------E--E---EECCCC------C--ccceeecccEEEEEEEEEee
Confidence 1233221 1 1 222332 2 23557899999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEE
Q 023187 198 QGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTG 277 (286)
Q Consensus 198 ~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~ 277 (286)
++| ++.| +.|.|||.++++++.+|+++...... +...........+.+++++.|++| .+.|+||++|++.+
T Consensus 216 ~~H-~s~p-~~g~nAi~~~~~~~~~l~~l~~~~~~------~~~~~~~~~~~~~~t~~v~~i~gG-~~~nvvP~~a~~~~ 286 (422)
T PRK06915 216 AAH-GGTR-YEGVSAIEKSMFVIDHLRKLEEKRND------RITDPLYKGIPIPIPINIGKIEGG-SWPSSVPDSVILEG 286 (422)
T ss_pred ccc-cCCC-CcCcCHHHHHHHHHHHHHHHHHHhcc------ccCCCcccCCCCCceEeEEEeeCC-CCCCccCcEEEEEE
Confidence 999 6899 99999999999999999987642110 000000000112468999999999 89999999999999
Q ss_pred EEecCCCC
Q 023187 278 YIHCGFTS 285 (286)
Q Consensus 278 diR~~~~~ 285 (286)
|+|+.+..
T Consensus 287 d~R~~p~~ 294 (422)
T PRK06915 287 RCGIAPNE 294 (422)
T ss_pred EEEECCCC
Confidence 99998654
No 12
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=6.2e-32 Score=257.11 Aligned_cols=216 Identities=18% Similarity=0.244 Sum_probs=162.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc-ccccEEEEEcCCCCCCCEEEeeccCCCCCCC-----------------CCCcc
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVD-HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-----------------GIFDG 62 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~-~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-----------------g~~D~ 62 (286)
+|++|.++++||+++|+++|+++++. ...|+++++ |+.. .|.|+|.||+|+||.+ |++|+
T Consensus 112 ls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~-g~~~-~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~ 189 (478)
T PLN02280 112 LAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWI-GTGG-PPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDA 189 (478)
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEE-CCCC-CCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcH
Confidence 47899999999999999999998763 345799998 5322 3899999999999952 45555
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCCh
Q 023187 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDI 142 (286)
Q Consensus 63 k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~ 142 (286)
+++++|++++.|++.+. +++++|.|+|++|||++. |++.+. +.|...
T Consensus 190 --~~A~~l~a~~~L~~~~~--~~~g~V~~if~pdEE~g~------Ga~~li-----------------------~~g~~~ 236 (478)
T PLN02280 190 --HVAMLLGAAKILKSREH--LLKGTVVLLFQPAEEAGN------GAKRMI-----------------------GDGALD 236 (478)
T ss_pred --HHHHHHHHHHHHHhccc--cCCceEEEEecccccccc------hHHHHH-----------------------HCCCCc
Confidence 66777999999988776 688999999999999842 887653 233321
Q ss_pred hhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHH
Q 023187 143 AEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVL 222 (286)
Q Consensus 143 d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~ 222 (286)
.+.+.+.+|+.+..+....+...+. ..+|..+++|+++|+++| ++.| +.|+|||.++++++..
T Consensus 237 -------------~~d~~~~~h~~~~~p~g~ig~~~~~--~~~G~~~~~I~v~Gk~aH-as~P-~~G~NAI~~aa~li~~ 299 (478)
T PLN02280 237 -------------DVEAIFAVHVSHEHPTAVIGSRPGP--LLAGCGFFRAVISGKKGR-AGSP-HHSVDLILAASAAVIS 299 (478)
T ss_pred -------------CCCEEEEEecCCCCCCceeEecccc--cccceeEEEEEEECcchh-cCCc-ccCcCHHHHHHHHHHH
Confidence 1123334776332111111122222 257999999999999999 6899 9999999999999999
Q ss_pred HHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 223 LERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
|+++..+.. .+. ...+++++.|+|| .+.|+||++|++++|+|+.+.
T Consensus 300 l~~l~~r~~--------------~~~-~~~tvnvg~I~GG-~~~NvIPd~~~l~~diR~~~~ 345 (478)
T PLN02280 300 LQGIVSREA--------------NPL-DSQVVSVTTMDGG-NNLDMIPDTVVLGGTFRAFSN 345 (478)
T ss_pred HHHHHhccc--------------CCC-CCcEEEEEEEEcc-CCCCEeCCEEEEEEEEecCCH
Confidence 998864321 122 4568999999999 999999999999999999764
No 13
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=5e-32 Score=251.62 Aligned_cols=208 Identities=21% Similarity=0.201 Sum_probs=162.7
Q ss_pred CHHHH---HHHHHHHHHHHHcCCEEEEcc----c-ccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------
Q 023187 2 SPASV---RAGNLIRQWMEDAGLRTWVDH----L-GNVHGRVEGLNASAQALLIGSHLDTVVDA---------------- 57 (286)
Q Consensus 2 s~~E~---~~~~~l~~~l~~~G~~v~~~~----~-~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------- 57 (286)
|++|. ++++||.++|+++|++++... . .|+++++++.....|+|+|+||+||||+.
T Consensus 27 s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~ly 106 (376)
T PRK07473 27 TWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPVGTLEKLPWRREGNKCY 106 (376)
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCCCCccCCCeEEECCEEE
Confidence 44454 777899999999999987632 2 36889986533346899999999999642
Q ss_pred --CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHH
Q 023187 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (286)
Q Consensus 58 --g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l 135 (286)
|+.|||+|++++|+|++.|++.+. .++.+|.|+|++|||.+ ..|++.+..
T Consensus 107 GrG~~D~Kgglaa~l~A~~~l~~~~~--~~~~~v~~~~~~dEE~g-----~~g~~~~~~--------------------- 158 (376)
T PRK07473 107 GPGILDMKGGNYLALEAIRQLARAGI--TTPLPITVLFTPDEEVG-----TPSTRDLIE--------------------- 158 (376)
T ss_pred cCchhhchHHHHHHHHHHHHHHHcCC--CCCCCEEEEEeCCcccC-----CccHHHHHH---------------------
Confidence 667999999999999999998876 56789999999999983 247765421
Q ss_pred HhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 023187 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (286)
Q Consensus 136 ~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~ 215 (286)
+....+ + ++ +..||+ ....+++.+++|..|++|+++|+++|||+.| +.|.|||.+
T Consensus 159 -~~~~~~------------d--~~---iv~ep~------~~~~~v~~~~~G~~~~~v~~~G~~aHag~~p-~~g~nAi~~ 213 (376)
T PRK07473 159 -AEAARN------------K--YV---LVPEPG------RPDNGVVTGRYAIARFNLEATGRPSHAGATL-SEGRSAIRE 213 (376)
T ss_pred -HhhccC------------C--EE---EEeCCC------CCCCCEEEECeeeEEEEEEEEeEcCCCCCCc-ccCcCHHHH
Confidence 111111 1 12 444553 2223578899999999999999999987899 899999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 216 ~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
+++++.+|+++.. ...++++|.|++| .+.|+||++|++++|+|..+.
T Consensus 214 ~~~~i~~l~~~~~---------------------~~~~~~vg~i~gg-~~~n~VP~~~~~~~d~r~~~~ 260 (376)
T PRK07473 214 MARQILAIDAMTT---------------------EDCTFSVGIVHGG-QWVNCVATTCTGEALSMAKRQ 260 (376)
T ss_pred HHHHHHHHHHhcC---------------------CCceEeEeeEEcC-CCCcCCCCceEEEEEEEeCCH
Confidence 9999999988642 2357899999999 889999999999999997653
No 14
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=8.3e-32 Score=250.10 Aligned_cols=214 Identities=19% Similarity=0.245 Sum_probs=167.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcc----cccEEEEEcCCCCCCCEEEeeccCCCCCCC-------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~----~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------- 57 (286)
.|++|.++++||+++|+++|++++.+. ..|+++++ |.. .|+|+|.+|+||||.+
T Consensus 17 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~-g~~--~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l 93 (377)
T PRK08588 17 VNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEI-GSG--SPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKL 93 (377)
T ss_pred CCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEe-CCC--CceEEEEeeecccCCCCcccCcCCCCCeEEECCEE
Confidence 378899999999999999999987543 35899998 432 3899999999999973
Q ss_pred ---CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHH
Q 023187 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (286)
Q Consensus 58 ---g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~ 134 (286)
|..|||+|++++|.+++.|++.+. .++++|.|+|++|||.+ ..|++.+..
T Consensus 94 ~GrG~~D~Kgg~aa~l~a~~~l~~~~~--~~~~~i~l~~~~dEE~g-----~~G~~~~~~-------------------- 146 (377)
T PRK08588 94 YGRGATDMKSGLAALVIAMIELKEQGQ--LLNGTIRLLATAGEEVG-----ELGAKQLTE-------------------- 146 (377)
T ss_pred EecCcccccchHHHHHHHHHHHHHcCC--CCCCcEEEEEEcccccC-----chhHHHHHh--------------------
Confidence 456999999999999999999887 78899999999999973 247776531
Q ss_pred HHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHH
Q 023187 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (286)
Q Consensus 135 l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~ 214 (286)
.|+.. .+.++ +..+|+ ...++.+++|..+++|+++|+++| ++.| +.|.|||.
T Consensus 147 ---~~~~~-------------~~d~~--i~~ep~--------~~~i~~~~~G~~~~~i~~~G~~~H-ss~p-~~g~nAi~ 198 (377)
T PRK08588 147 ---KGYAD-------------DLDAL--IIGEPS--------GHGIVYAHKGSMDYKVTSTGKAAH-SSMP-ELGVNAID 198 (377)
T ss_pred ---cCccC-------------CCCEE--EEecCC--------CceeEEEEEEEEEEEEEEEeechh-ccCC-ccccCHHH
Confidence 23211 01111 222332 134667899999999999999999 5799 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 215 ~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
++++++.+|+++..+... .++..+.++++++.|++| .+.|+||++|++++|+|+.+.+
T Consensus 199 ~~~~~l~~l~~~~~~~~~------------~~~~~~~~t~~v~~i~gG-~~~nvip~~~~~~~d~R~~p~~ 256 (377)
T PRK08588 199 PLLEFYNEQKEYFDSIKK------------HNPYLGGLTHVVTIINGG-EQVNSVPDEAELEFNIRTIPEY 256 (377)
T ss_pred HHHHHHHHHHHHhhhhcc------------cCccCCCCceeeeEEeCC-CcCCcCCCeEEEEEEeccCCCC
Confidence 999999999987543210 001124678999999999 8999999999999999998653
No 15
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.3e-31 Score=246.77 Aligned_cols=221 Identities=21% Similarity=0.251 Sum_probs=167.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE---cccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~---~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------------- 57 (286)
+|++|.++++||.++|+++|++++. +..+|+++++ |. ..|.|+|.+|+||||.+
T Consensus 17 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~-g~--~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iy 93 (375)
T PRK13009 17 VTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARR-GT--EGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLY 93 (375)
T ss_pred CCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEe-cC--CCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEE
Confidence 3678999999999999999999874 3457899988 54 35899999999999964
Q ss_pred --CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHH
Q 023187 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (286)
Q Consensus 58 --g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l 135 (286)
|..|||++++++|.+++.|++.+. .++++|.|+|++|||.++ ..|++.+. +.+
T Consensus 94 GrG~~D~Kgg~aa~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~~~----~~G~~~~~-------------------~~~ 148 (375)
T PRK13009 94 GRGAADMKGSLAAFVVAAERFVAAHP--DHKGSIAFLITSDEEGPA----INGTVKVL-------------------EWL 148 (375)
T ss_pred ecCCccChHHHHHHHHHHHHHHHhcC--CCCceEEEEEEeeccccc----ccCHHHHH-------------------HHH
Confidence 455999999999999999998876 788999999999999742 34887653 222
Q ss_pred HhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 023187 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (286)
Q Consensus 136 ~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~ 215 (286)
.+.+..+|. + +..||.... .....++.+++|..+++|+++|+++|| +.| +.|.|||..
T Consensus 149 ~~~~~~~d~--------------~---i~~ep~~~~---~~~~~i~~g~~g~~~~~i~v~G~~~Ha-~~p-~~g~nAi~~ 206 (375)
T PRK13009 149 KARGEKIDY--------------C---IVGEPTSTE---RLGDVIKNGRRGSLTGKLTVKGVQGHV-AYP-HLADNPIHL 206 (375)
T ss_pred HHcCcCCCE--------------E---EEcCCCccc---CCCCeEEEecceEEEEEEEEEecCccc-CCC-CcccCHHHH
Confidence 233332221 1 222332110 011135678999999999999999995 689 999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 216 ~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
++++|.+|+.+..... .+..++.+++++.|++|..+.|+||++|++.+|+|+++..
T Consensus 207 ~~~~l~~l~~~~~~~~--------------~~~~~~~~~~i~~i~~G~~~~nvip~~~~~~~diR~~~~~ 262 (375)
T PRK13009 207 AAPALAELAATEWDEG--------------NEFFPPTSLQITNIDAGTGATNVIPGELEAQFNFRFSTEH 262 (375)
T ss_pred HHHHHHHHHhhhccCC--------------CccCCCceEEEEEEecCCCCCcccCCcEEEEEEEecCCCC
Confidence 9999999987643210 0122456889999998844789999999999999997653
No 16
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-31 Score=250.02 Aligned_cols=206 Identities=22% Similarity=0.216 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHHcCCEEEEccc------------------ccEEEEEcCCCCCCCEEEeeccCCCCCCC---------
Q 023187 5 SVRAGNLIRQWMEDAGLRTWVDHL------------------GNVHGRVEGLNASAQALLIGSHLDTVVDA--------- 57 (286)
Q Consensus 5 E~~~~~~l~~~l~~~G~~v~~~~~------------------~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------- 57 (286)
+.++++||+++|+++|++++..+. +||++++++. ..++|+|+||+||||++
T Consensus 39 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~~~--~~~~lll~gH~DvVp~~~~Pf~~~~~ 116 (402)
T PRK07338 39 LARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPALHVSVRPE--APRQVLLTGHMDTVFPADHPFQTLSW 116 (402)
T ss_pred HHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeEEEEECCC--CCccEEEEeecCccCCCCCcccCCeE
Confidence 468999999999999998875321 4899998653 23579999999999863
Q ss_pred ---------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCC
Q 023187 58 ---------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSG 128 (286)
Q Consensus 58 ---------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g 128 (286)
|+.|||+|++++|+|++.|++.+. .++++|.|+|++|||.++ .|++.+..
T Consensus 117 ~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~~~-------------- 175 (402)
T PRK07338 117 LDDGTLNGPGVADMKGGIVVMLAALLAFERSPL--ADKLGYDVLINPDEEIGS-----PASAPLLA-------------- 175 (402)
T ss_pred eeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCC--CCCCCEEEEEECCcccCC-----hhhHHHHH--------------
Confidence 567999999999999999998876 677899999999999842 36664421
Q ss_pred CcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCC
Q 023187 129 VTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSM 208 (286)
Q Consensus 129 ~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~ 208 (286)
+.... ..++ ++.||+.. ...++.+++|..+++|+++|+++||+..| +.
T Consensus 176 --------~~~~~--------------~~~~---i~~ep~~~------~~~v~~~~kG~~~~~v~v~G~~aHs~~~p-~~ 223 (402)
T PRK07338 176 --------ELARG--------------KHAA---LTYEPALP------DGTLAGARKGSGNFTIVVTGRAAHAGRAF-DE 223 (402)
T ss_pred --------HHhcc--------------CcEE---EEecCCCC------CCcEEeecceeEEEEEEEEeEcccCCCCc-cc
Confidence 11000 0112 56666421 12355679999999999999999965568 89
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 209 RQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 209 g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
|.|||.++++++.+|+++.... +..+++++.|++| .+.|+||++|++++|+|+.+.+
T Consensus 224 g~nAi~~~~~~i~~l~~l~~~~-------------------~~~t~~vg~i~gG-~~~nvVP~~a~~~~d~R~~~~~ 280 (402)
T PRK07338 224 GRNAIVAAAELALALHALNGQR-------------------DGVTVNVAKIDGG-GPLNVVPDNAVLRFNIRPPTPE 280 (402)
T ss_pred CccHHHHHHHHHHHHHhhhccC-------------------CCcEEEEEEEecC-CCCceeccccEEEEEeccCCHH
Confidence 9999999999999998865431 3468999999998 9999999999999999998653
No 17
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=3.1e-31 Score=249.04 Aligned_cols=206 Identities=20% Similarity=0.221 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcc-----cccEEEEEcCCCCCCCEEEeeccCCCCCCC------------------CCCc
Q 023187 5 SVRAGNLIRQWMEDAGLRTWVDH-----LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIFD 61 (286)
Q Consensus 5 E~~~~~~l~~~l~~~G~~v~~~~-----~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------g~~D 61 (286)
+.++++||+++|+++|++++.+. ..|++++++|+ +.|.|+|.||+||||.+ |..|
T Consensus 59 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~--~~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D 136 (410)
T PRK06133 59 LKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGT--GKRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIAD 136 (410)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCC--CCceEEEEeecCccCCCCccCCCCEEEECCEEECCcccc
Confidence 45899999999999999987643 25799999764 35899999999999863 4579
Q ss_pred cHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCC
Q 023187 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSID 141 (286)
Q Consensus 62 ~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~ 141 (286)
||++++++|++++.|++.+. +++++|.|+|++|||.+ +.|++.+.. +....
T Consensus 137 ~kgg~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g-----~~G~~~~~~----------------------~~~~~ 187 (410)
T PRK06133 137 DKGGVAVILHALKILQQLGF--KDYGTLTVLFNPDEETG-----SPGSRELIA----------------------ELAAQ 187 (410)
T ss_pred chHHHHHHHHHHHHHHHcCC--CCCCCEEEEEECCcccC-----CccHHHHHH----------------------HHhcc
Confidence 99999999999999998876 67899999999999973 347776531 10101
Q ss_pred hhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHH
Q 023187 142 IAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (286)
Q Consensus 142 ~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~ 221 (286)
++ .. +..+|+. ....++++++|..+++|+++|+++|||+.| +.|.|||..+++++.
T Consensus 188 ------------~d---~~--i~~ep~~------~~~~v~~~~~G~~~~~v~v~G~~~Hsg~~p-~~g~nAi~~~~~~i~ 243 (410)
T PRK06133 188 ------------HD---VV--FSCEPGR------AKDALTLATSGIATALLEVKGKASHAGAAP-ELGRNALYELAHQLL 243 (410)
T ss_pred ------------CC---EE--EEeCCCC------CCCCEEEeccceEEEEEEEEeeccccCCCc-ccCcCHHHHHHHHHH
Confidence 11 11 2234431 112356779999999999999999987899 999999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
.|+++... . ...+++++.|++| ++.|+||++|++.+|+|+.+.+
T Consensus 244 ~l~~~~~~------------------~-~~~t~~~~~i~gG-~~~nvIP~~~~~~~diR~~~~~ 287 (410)
T PRK06133 244 QLRDLGDP------------------A-KGTTLNWTVAKAG-TNRNVIPASASAQADVRYLDPA 287 (410)
T ss_pred HHHhccCC------------------C-CCeEEEeeEEECC-CCCceeCCccEEEEEEEECCHH
Confidence 98876432 1 3467899999999 9999999999999999998754
No 18
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=4.2e-31 Score=243.68 Aligned_cols=219 Identities=25% Similarity=0.336 Sum_probs=175.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEccc-cc-EEEEEcCCCCCCCEEEeeccCCCCC-----------------CCCCCc
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHL-GN-VHGRVEGLNASAQALLIGSHLDTVV-----------------DAGIFD 61 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~-~n-v~a~~~g~~~~~~~l~~~~H~DtV~-----------------~~g~~D 61 (286)
||.+|+++++||+++|+++|+++..... ++ ++++++|+. ..|+|.|.+-||..| |+|+||
T Consensus 27 L~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~-~g~tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD 105 (392)
T COG1473 27 LGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGK-PGPTIALRADMDALPIQEETGLPFASKNPGVMHACGHD 105 (392)
T ss_pred cchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCC-CCCEEEEEeecccCccccccCCCcccCCCCCcccCCch
Confidence 6889999999999999999999443322 34 999998653 346999999999988 679999
Q ss_pred cHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCC
Q 023187 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSID 141 (286)
Q Consensus 62 ~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~ 141 (286)
+|++++ |.+++.|++... +++++|+|+|+|+||+++ |++.+. +.|..
T Consensus 106 ~Hta~l--LgaA~~L~~~~~--~~~Gtv~~ifQPAEE~~~------Ga~~mi-----------------------~~G~~ 152 (392)
T COG1473 106 GHTAIL--LGAALALAEHKD--NLPGTVRLIFQPAEEGGG------GAKAMI-----------------------EDGVF 152 (392)
T ss_pred HHHHHH--HHHHHHHHhhhh--hCCcEEEEEecccccccc------cHHHHH-----------------------hcCCc
Confidence 999988 999999998743 689999999999999854 776542 34532
Q ss_pred hhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHH
Q 023187 142 IAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (286)
Q Consensus 142 ~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~ 221 (286)
- + .+++.+-+|+.|+.+.+......|.. ..+...++|+|+|+++| ++.| |.++||+.+++.++.
T Consensus 153 ~----------~--~vD~v~g~H~~p~~~~g~v~~~~G~~--~aa~d~~~i~~~GkggH-~a~P-h~~~d~i~aa~~~v~ 216 (392)
T COG1473 153 D----------D--FVDAVFGLHPGPGLPVGTVALRPGAL--MAAADEFEITFKGKGGH-AAAP-HLGIDALVAAAQLVT 216 (392)
T ss_pred c----------c--cccEEEEecCCCCCCCceEEeecccc--eeecceEEEEEEeCCcc-cCCc-ccccCHHHHHHHHHH
Confidence 1 1 04455559998773223333334433 67889999999999999 6999 999999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
.|+.+..+..+ |. ...+++++.+++| ++.||||+++++++++|+++.+
T Consensus 217 ~lq~ivsr~~~--------------p~-~~~vv~vg~~~aG-~a~NVIpd~A~l~gtvR~~~~~ 264 (392)
T COG1473 217 ALQTIVSRNVD--------------PL-DSAVVTVGKIEAG-TAANVIPDSAELEGTIRTFSDE 264 (392)
T ss_pred HHHHHHhcccC--------------Cc-cCeEEEEEEecCC-CcCCcCCCeeEEEEEeecCCHH
Confidence 99999877432 33 3579999999999 9999999999999999998753
No 19
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=1.2e-30 Score=241.77 Aligned_cols=221 Identities=21% Similarity=0.263 Sum_probs=166.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---ccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~---~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------------- 57 (286)
.|++|.++++||+++|+++|++++.. ..+|+++++ |. ..|.|+|.||+||||.+
T Consensus 14 ~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~-g~--~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~y 90 (370)
T TIGR01246 14 VTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATR-GT--GEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLY 90 (370)
T ss_pred CCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEe-cC--CCcEEEEEccccccCCCCccccccCCCCcEEECCEEE
Confidence 37789999999999999999998753 457899986 43 35899999999999863
Q ss_pred --CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHH
Q 023187 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (286)
Q Consensus 58 --g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l 135 (286)
|..|||+++++++.+++.|.+.+. +++++|.|+|++|||.++ ..|++.+.. .+
T Consensus 91 GrG~~D~Kgg~a~~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~~~----~~G~~~~~~-------------------~~ 145 (370)
T TIGR01246 91 GRGAADMKGSLAAFIVAAERFVKKNP--DHKGSISLLITSDEEGTA----IDGTKKVVE-------------------TL 145 (370)
T ss_pred ecccccchHHHHHHHHHHHHHHHhcC--CCCCcEEEEEEeccccCC----CcCHHHHHH-------------------HH
Confidence 345999999999999999988876 688999999999999742 248876531 12
Q ss_pred HhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 023187 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (286)
Q Consensus 136 ~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~ 215 (286)
...+..+| . + +..||+.... .+ ..++.+++|..+++|+++|+++| ++.| +.|.|||..
T Consensus 146 ~~~~~~~d------------~--~---i~~ep~~~~~-~~--~~i~~~~~G~~~~~v~v~G~~~H-~~~p-~~g~nAi~~ 203 (370)
T TIGR01246 146 MARDELID------------Y--C---IVGEPSSVKK-LG--DVIKNGRRGSITGNLTIKGIQGH-VAYP-HLANNPIHK 203 (370)
T ss_pred HhcCCCCC------------E--E---EEcCCCCccc-CC--ceEEEeeeEEEEEEEEEEccCcc-cCCc-ccCCCHHHH
Confidence 22222221 1 1 2234432111 11 12567899999999999999999 5689 999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 216 ~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++++..|++...... .+...+.+++++.|++|..+.|+||++|++.+|+|+.+.+
T Consensus 204 ~~~~i~~l~~~~~~~~--------------~~~~~~~t~~i~~i~~g~~~~nvvP~~~~~~~diR~~~~~ 259 (370)
T TIGR01246 204 AAPALAELTAIKWDEG--------------NEFFPPTSLQITNIHAGTGANNVIPGELYVQFNLRFSTEV 259 (370)
T ss_pred HHHHHHHHhhhhhccC--------------CccCCCCceEeeeeecCCCCCcccCCceEEEEEEecCCCC
Confidence 9999999987533210 0112456899999999844789999999999999997654
No 20
>PRK06837 acetylornithine deacetylase; Provisional
Probab=99.98 E-value=4.1e-31 Score=249.43 Aligned_cols=221 Identities=18% Similarity=0.204 Sum_probs=166.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE---------------------cccccEEEEEcCCCCCCCEEEeeccCCCCCCC--
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWV---------------------DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~---------------------~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-- 57 (286)
.|++|.++++||+++|+++|+++++ +..+||+++++|..+..|.|+|.||+||||.+
T Consensus 35 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~g~~~~~~~il~~gH~DvVp~~~~ 114 (427)
T PRK06837 35 TRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAPNVVGTYRPAGKTGRSLILQGHIDVVPEGPL 114 (427)
T ss_pred CCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCceEEEEecCCCCCCCeEEEEeecccCCCCCc
Confidence 4778999999999999999998754 23578999998754446899999999999974
Q ss_pred --------------------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccc
Q 023187 58 --------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (286)
Q Consensus 58 --------------------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (286)
|+.|||+|++++|.+++.|++.+. .++++|.|+|+++||.++ .|+....
T Consensus 115 ~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~~g-----~g~~~~~---- 183 (427)
T PRK06837 115 DLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGL--APAARVHFQSVIEEESTG-----NGALSTL---- 183 (427)
T ss_pred cccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCC--CCCCcEEEEEEeccccCC-----HhHHHHH----
Confidence 677999999999999999999886 788999999999999742 2544321
Q ss_pred cchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEec
Q 023187 118 VSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS 197 (286)
Q Consensus 118 ~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~ 197 (286)
..|+.+| . + +..||. + ..++.+++|..+++|+++|+
T Consensus 184 -------------------~~~~~~d------------~--~---iv~ep~------~--~~i~~~~~G~~~~~i~v~G~ 219 (427)
T PRK06837 184 -------------------QRGYRAD------------A--C---LIPEPT------G--EKLVRAQVGVIWFRLRVRGA 219 (427)
T ss_pred -------------------hcCcCCC------------E--E---EEcCCC------C--CccccccceeEEEEEEEEee
Confidence 1233221 1 1 222332 1 23567899999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEE
Q 023187 198 QGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTG 277 (286)
Q Consensus 198 ~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~ 277 (286)
++| ++.| +.|.|||..++++|..|+++...... .......+.....+.+++++.|++| ...|+||++|++.+
T Consensus 220 ~~H-s~~p-~~g~nAi~~~~~~i~~l~~~~~~~~~-----~~~~~~~~~~~~~~~t~ni~~i~gG-~~~nvVP~~~~~~~ 291 (427)
T PRK06837 220 PVH-VREA-GTGANAIDAAYHLIQALRELEAEWNA-----RKASDPHFEDVPHPINFNVGIIKGG-DWASSVPAWCDLDC 291 (427)
T ss_pred ccc-cCCc-ccCcCHHHHHHHHHHHHHHHHHHHhh-----cccCCCcccCCCCceeEeeeeEeCC-CCCCccCCEEEEEE
Confidence 999 4689 99999999999999999987542110 0000000000113568899999988 88999999999999
Q ss_pred EEecCCC
Q 023187 278 YIHCGFT 284 (286)
Q Consensus 278 diR~~~~ 284 (286)
++|+.+.
T Consensus 292 ~ir~~p~ 298 (427)
T PRK06837 292 RIAIYPG 298 (427)
T ss_pred EEeECCC
Confidence 9997654
No 21
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=99.98 E-value=1.9e-31 Score=246.29 Aligned_cols=207 Identities=18% Similarity=0.234 Sum_probs=162.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcc-------cccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------C
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------G 58 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~-------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------g 58 (286)
.|++|.++++||+++|+++|++++.+. ..|++++++|+. +.|+|+|.||+||||.+ |
T Consensus 15 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G 93 (361)
T TIGR01883 15 ESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTV-KFDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLG 93 (361)
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCC-CCCcEEEEeeccccCCCCCCCceecCCeEecCC
Confidence 367899999999999999999987654 578999997753 35899999999999953 3
Q ss_pred C----CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHH
Q 023187 59 I----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (286)
Q Consensus 59 ~----~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~ 134 (286)
. .|||+|++++|.+++.|++.+ .++++|.|+|++|||.+ +.|++.+..
T Consensus 94 ~~~~g~D~k~g~a~~l~~~~~l~~~~---~~~~~v~~~~~~~EE~g-----~~G~~~~~~-------------------- 145 (361)
T TIGR01883 94 GTILGADDKAGVAAMLEAMDVLSTEE---TPHGTIEFIFTVKEELG-----LIGMRLFDE-------------------- 145 (361)
T ss_pred CeEeeccccHHHHHHHHHHHHHHhcC---CCCCCEEEEEEcccccC-----chhHhHhCh--------------------
Confidence 3 799999999999999998875 36789999999999973 357775421
Q ss_pred HHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHH
Q 023187 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (286)
Q Consensus 135 l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~ 214 (286)
.++. ...+ ++++++. ....++.+++|..+++|+++|+++|+|+.| +.|+|||.
T Consensus 146 ---~~~~--------------~~~~---~~~~~~~------~~~~i~~~~~g~~~~~i~~~G~~~Ha~~~p-~~g~nAi~ 198 (361)
T TIGR01883 146 ---SKIT--------------AAYG---YCLDAPG------EVGNIQLAAPTQVKVDATIAGKDAHAGLVP-EDGISAIS 198 (361)
T ss_pred ---hhcC--------------ccee---EEEeCCC------CcceEEecCCceEEEEEEEEeeecCCCCCc-ccCcCHHH
Confidence 0110 0112 4444421 111356678999999999999999976789 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 215 ~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
+++++|.+|+... ..+..+++++.+++| .+.|+||++|++.+|+|+.+.
T Consensus 199 ~~~~~i~~l~~~~--------------------~~~~~~~~i~~i~gG-~~~nvVP~~~~~~~diR~~~~ 247 (361)
T TIGR01883 199 VARMAIHAMRLGR--------------------IDEETTANIGSFSGG-VNTNIVQDEQLIVAEARSLSF 247 (361)
T ss_pred HHHHHHHhccccC--------------------CCCccccccceeecC-CccCccCCceEEEEEEecCCH
Confidence 9999998886421 112357899999999 899999999999999999764
No 22
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=99.98 E-value=7e-31 Score=245.43 Aligned_cols=214 Identities=22% Similarity=0.250 Sum_probs=164.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------------- 57 (286)
.|++|.++++||.++|+++|++ ++.+..+|+++++ |. ..|.|+|.+|+||||.+
T Consensus 28 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~-g~--~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGr 104 (395)
T TIGR03320 28 ESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYI-GH--GPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGR 104 (395)
T ss_pred CCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEe-CC--CCcEEEEEecccccCCCCccccccCCCceEEECCEEEec
Confidence 3678999999999999999997 4666678999988 43 24789999999999863
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHh
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 137 (286)
|..|||++++++|.|++.|++.+. .++.+|.|++++|||.++ ..+++.+ +.+
T Consensus 105 G~~D~Kg~~aa~l~A~~~l~~~g~--~~~~~i~~~~~~dEE~~~----g~~~~~~----------------------~~~ 156 (395)
T TIGR03320 105 GASDQEGGIASMVYAGKIIKDLGL--LDDYTLLVTGTVQEEDCD----GLCWQYI----------------------IEE 156 (395)
T ss_pred CccCccchHHHHHHHHHHHHHcCC--CCCceEEEEecccccccC----chHHHHH----------------------HHh
Confidence 678999999999999999999886 677899999999999732 0122222 112
Q ss_pred CCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 023187 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (286)
Q Consensus 138 ~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a 217 (286)
.++.+| . + +..||+ ...++.+++|..+++|+++|+++|+ +.| +.|.|||.+++
T Consensus 157 ~~~~~d------------~--~---iv~ep~--------~~~i~~g~~G~~~~~v~~~G~~~Hs-s~p-~~g~nAi~~~~ 209 (395)
T TIGR03320 157 DGIKPE------------F--V---VITEPT--------DMNIYRGQRGRMEIKVTVKGVSCHG-SAP-ERGDNAIYKMA 209 (395)
T ss_pred cCCCCC------------E--E---EEcCCC--------ccceEEecceEEEEEEEEeeecccc-CCC-CCCCCHHHHHH
Confidence 233221 1 1 333442 2346678999999999999999995 689 99999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++..|+++..... .++..+..+++++.|++|+.+.|+||++|++.+|+|+.+.+
T Consensus 210 ~~l~~l~~~~~~~~-------------~~~~~~~~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~ 264 (395)
T TIGR03320 210 PILKELSQLNANLV-------------EDPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGE 264 (395)
T ss_pred HHHHHHHHHHHhhc-------------CCcccCcCceeeeeeecCCCCcCccCCEEEEEEEEecCCCC
Confidence 99999998754311 01122346889999998855899999999999999998654
No 23
>PRK13004 peptidase; Reviewed
Probab=99.98 E-value=1.4e-30 Score=243.70 Aligned_cols=214 Identities=22% Similarity=0.249 Sum_probs=165.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEE-EEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRT-WVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v-~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------------- 57 (286)
.|++|.+++++|.++|+++|+++ +++..+|+++++++. .|+|+|.+|+||||.+
T Consensus 30 ~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~---~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGr 106 (399)
T PRK13004 30 ESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHG---KKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGR 106 (399)
T ss_pred CCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCC---CcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeC
Confidence 47889999999999999999974 556678999998653 2899999999999963
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHh
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 137 (286)
|..|||++++++|++++.|++.+. .++++|.|+|++|||.++ ..|++.+. .+
T Consensus 107 G~~D~Kg~~aa~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~~~----g~~~~~~~----------------------~~ 158 (399)
T PRK13004 107 GTSDQKGGMASMVYAAKIIKDLGL--DDEYTLYVTGTVQEEDCD----GLCWRYII----------------------EE 158 (399)
T ss_pred CccccchHHHHHHHHHHHHHhcCC--CCCCeEEEEEEcccccCc----chhHHHHH----------------------Hh
Confidence 456999999999999999999887 788999999999999632 12444331 11
Q ss_pred CCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 023187 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (286)
Q Consensus 138 ~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a 217 (286)
.++.+ +. + +..++. ...++.+++|..+++|+++|+++|+ +.| +.|.|||.+++
T Consensus 159 ~~~~~------------d~--~---i~~e~~--------~~~i~~~~~G~~~~~v~v~G~~~Ha-~~p-~~g~nAi~~~~ 211 (399)
T PRK13004 159 DKIKP------------DF--V---VITEPT--------DLNIYRGQRGRMEIRVETKGVSCHG-SAP-ERGDNAIYKMA 211 (399)
T ss_pred cCCCC------------CE--E---EEccCC--------CCceEEecceEEEEEEEEecccccc-CCC-CCCCCHHHHHH
Confidence 12221 11 1 222332 2346678999999999999999995 689 99999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++..|+++...... .+..+..+++++.|.+|..+.|+||++|++.+|+|+.+.+
T Consensus 212 ~~i~~l~~~~~~~~~-------------~~~~~~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~ 266 (399)
T PRK13004 212 PILNELEELNPNLKE-------------DPFLGKGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGE 266 (399)
T ss_pred HHHHHHHhhcccccc-------------CCcCCCceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCC
Confidence 999999987543100 0112346789999987745899999999999999998654
No 24
>PRK07906 hypothetical protein; Provisional
Probab=99.97 E-value=8.9e-31 Score=247.03 Aligned_cols=235 Identities=21% Similarity=0.175 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcc----cccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------------
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~~----~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------- 57 (286)
++|.++++||.++|+++|++++.++ .+|++++++|..+..++|+|++|+||||.+
T Consensus 22 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGr 101 (426)
T PRK07906 22 KGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGR 101 (426)
T ss_pred chHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEec
Confidence 6899999999999999999987653 479999998754445899999999999863
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHh
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 137 (286)
|+.|||++++++|++++.|++.+. .++++|.|+|++|||.++ ..|++.+.... ..
T Consensus 102 G~~D~Kg~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~----~~g~~~l~~~~-------------------~~ 156 (426)
T PRK07906 102 GAVDMKDMDAMMLAVVRHLARTGR--RPPRDLVFAFVADEEAGG----TYGAHWLVDNH-------------------PE 156 (426)
T ss_pred CccccchHHHHHHHHHHHHHHcCC--CCCccEEEEEecCcccch----hhhHHHHHHHH-------------------HH
Confidence 677999999999999999999887 788999999999999842 34777654210 00
Q ss_pred CCCChhhHHhhhccCCCccccceEEeeccCCcccc--cCC-cccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHH
Q 023187 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLE--WVG-FPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (286)
Q Consensus 138 ~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~--~~~-~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~ 214 (286)
. + +...+ +..|++.... ... ....++.++||..|++|+++|+++| ++.| + +.|||.
T Consensus 157 ~-~--------------~~~~~---ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~H-ss~p-~-~~nAi~ 215 (426)
T PRK07906 157 L-F--------------EGVTE---AISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGH-GSMV-N-DDNAVT 215 (426)
T ss_pred h-c--------------cchhe---EEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCC-CCCC-C-CCCHHH
Confidence 0 0 00000 1123322100 000 1123667899999999999999999 5788 6 499999
Q ss_pred HHHHHHHHHHHHhcCCC-------------CC--cccCCCCCc---cccc---c---CCCCeEEEEEEEeecCCccceec
Q 023187 215 AAAELIVLLERLCKHPK-------------DF--LSYDGRSNC---STLE---S---LSSSLVCTVGEISSWPSASNVIP 270 (286)
Q Consensus 215 ~~a~~i~~l~~~~~~~~-------------~~--~~~~~~~~~---~~~~---~---~~~~~~~~~g~i~~g~~~~NvIP 270 (286)
.++++|.+|+++..+.. .. ..++..... ..+. + ....++++++.|++| .+.|+||
T Consensus 216 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG-~~~NviP 294 (426)
T PRK07906 216 RLAEAVARIGRHRWPLVLTPTVRAFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAG-YKVNVIP 294 (426)
T ss_pred HHHHHHHHHHhCCCCcccCHHHHHHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEecc-CccccCC
Confidence 99999999986422100 00 000000000 0000 0 001358999999999 8899999
Q ss_pred CeEEEEEEEecCCC
Q 023187 271 GEIIVTGYIHCGFT 284 (286)
Q Consensus 271 ~~~~~~~diR~~~~ 284 (286)
++|++++|+|+.+.
T Consensus 295 ~~~~~~~d~R~~p~ 308 (426)
T PRK07906 295 GTAEAVVDGRFLPG 308 (426)
T ss_pred CceEEEEEEeECCC
Confidence 99999999999754
No 25
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.97 E-value=3.6e-30 Score=242.85 Aligned_cols=224 Identities=17% Similarity=0.135 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcc------------cccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------
Q 023187 4 ASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------- 57 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~v~~~~------------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------- 57 (286)
+|.++++||+++|+++|++++... ..|++++++|+. ..+.|+|.+|+||||.+
T Consensus 35 ~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~-~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~d 113 (427)
T PRK13013 35 AYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGAR-DGDCVHFNSHHDVVEVGHGWTRDPFGGEVKD 113 (427)
T ss_pred cHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCC-CCCEEEEEeccccCCCCCCCcCCCCCceEEC
Confidence 578999999999999999987542 248999997653 35889999999999963
Q ss_pred ------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcH
Q 023187 58 ------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTV 131 (286)
Q Consensus 58 ------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~ 131 (286)
|+.|||++++++|++++.|++.+. .++++|.|+|++|||.++ ..|.+.+
T Consensus 114 g~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~----~~g~~~l------------------- 168 (427)
T PRK13013 114 GRIYGRGACDMKGGLAASIIAAEAFLAVYP--DFAGSIEISGTADEESGG----FGGVAYL------------------- 168 (427)
T ss_pred CEEEeccccccchHHHHHHHHHHHHHHhCC--CCCccEEEEEEeccccCC----hhHHHHH-------------------
Confidence 678999999999999999999876 678999999999999742 1133332
Q ss_pred HHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCC
Q 023187 132 LDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 211 (286)
Q Consensus 132 ~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~n 211 (286)
.+.|... +...++. +..||+ +. ..+..+++|..+++|+++|+++| ++.| +.|.|
T Consensus 169 ----~~~~~~~-----------~~~~d~~--i~~ep~------~~-~~i~~~~~G~~~~~i~v~G~~~H-~~~p-~~g~n 222 (427)
T PRK13013 169 ----AEQGRFS-----------PDRVQHV--IIPEPL------NK-DRICLGHRGVWWAEVETRGRIAH-GSMP-FLGDS 222 (427)
T ss_pred ----HhcCCcc-----------ccCCCEE--EEecCC------CC-CceEEeeeeEEEEEEEEEccccc-cCCC-CcCcC
Confidence 2223210 0011121 223442 11 23567899999999999999999 5799 99999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccCCCCCcccccc-CCCCeEEEEEEEeecCCcc----------ceecCeEEEEEEEe
Q 023187 212 PMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLES-LSSSLVCTVGEISSWPSAS----------NVIPGEIIVTGYIH 280 (286)
Q Consensus 212 Ai~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~g~~~~----------NvIP~~~~~~~diR 280 (286)
||.+++++|.+|++...+... .........+ .....+++++.|++| ... |+||++|++++|+|
T Consensus 223 ai~~~~~~l~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~t~~v~~i~gG-~~~~~~~~~~~~~n~IPd~a~~~idiR 296 (427)
T PRK13013 223 AIRHMGAVLAEIEERLFPLLA-----TRRTAMPVVPEGARQSTLNINSIHGG-EPEQDPDYTGLPAPCVADRCRIVIDRR 296 (427)
T ss_pred HHHHHHHHHHHHHHHhhhhhh-----cccccCCCCCcccCCCceeeeEEeCC-CccccccccccccccCCceEEEEEEEE
Confidence 999999999999875422100 0000000000 013578999999998 655 99999999999999
Q ss_pred cCCCC
Q 023187 281 CGFTS 285 (286)
Q Consensus 281 ~~~~~ 285 (286)
+.+.+
T Consensus 297 ~~p~~ 301 (427)
T PRK13013 297 FLIEE 301 (427)
T ss_pred eCCCC
Confidence 98754
No 26
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=99.97 E-value=1.6e-30 Score=241.32 Aligned_cols=219 Identities=22% Similarity=0.231 Sum_probs=166.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc----cc----cEEEEEcCCCCCCCEEEeeccCCCCCCC----------------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH----LG----NVHGRVEGLNASAQALLIGSHLDTVVDA---------------- 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~----~~----nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------- 57 (286)
|++|.++++||+++|+++|+++++.. .+ |+++.+.|.. ..|+|+|.+||||||.+
T Consensus 17 ~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~ill~~H~DtVp~~~~~~w~~~Pf~~~~~~ 95 (375)
T TIGR01910 17 GGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNG-NEKSLIFNGHYDVVPAGDLELWKTDPFKPVEKD 95 (375)
T ss_pred CcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCC-CCCEEEEecccccccCCChhhCcCCCCCcEEEC
Confidence 57899999999999999999986532 23 4677776642 35899999999999975
Q ss_pred ------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcH
Q 023187 58 ------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTV 131 (286)
Q Consensus 58 ------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~ 131 (286)
|..|+|++++++|++++.|++.+. .++++|.|+|+++||.+ +.|++.+..
T Consensus 96 g~i~grG~~D~k~~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g-----~~G~~~~~~----------------- 151 (375)
T TIGR01910 96 GKLYGRGATDMKGGLVALLYALKAIREAGI--KPNGNIILQSVVDEESG-----EAGTLYLLQ----------------- 151 (375)
T ss_pred CEEEecCccccchHHHHHHHHHHHHHHcCC--CCCccEEEEEEcCcccC-----chhHHHHHH-----------------
Confidence 567999999999999999999876 68899999999999973 348876532
Q ss_pred HHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCC
Q 023187 132 LDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 211 (286)
Q Consensus 132 ~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~n 211 (286)
.+... +++ .+ +..+++ + ...++.+++|..+++|+++|+++|+ +.| +.|.|
T Consensus 152 ------~~~~~----------~~d--~~---i~~~~~------~-~~~v~~~~~G~~~~~i~~~G~~~Hs-~~p-~~g~n 201 (375)
T TIGR01910 152 ------RGYFK----------DAD--GV---LIPEPS------G-GDNIVIGHKGSIWFKLRVKGKQAHA-SFP-QFGVN 201 (375)
T ss_pred ------cCCCC----------CCC--EE---EECCCC------C-CCceEEEecceEEEEEEEeeeeccc-CCC-Ccchh
Confidence 12110 011 11 223332 1 2346678999999999999999995 689 99999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 212 PMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 212 Ai~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
||..++++|.+|+++...... ... . ......++++++.|++| +..|+||++|++.+|+|+.+.+
T Consensus 202 Ai~~~~~~l~~l~~~~~~~~~------~~~--~-~~~~~~~t~~i~~i~gG-~~~nviP~~~~~~~diR~~~~~ 265 (375)
T TIGR01910 202 AIMKLAKLITELNELEEHIYA------RNS--Y-GFIPGPITFNPGVIKGG-DWVNSVPDYCEFSIDVRIIPEE 265 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhhh------ccc--c-cccCCCccccceeEECC-CCcCcCCCEEEEEEEeeeCCCC
Confidence 999999999999987543210 000 0 00123578999999998 9999999999999999998764
No 27
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=99.97 E-value=3.5e-30 Score=239.05 Aligned_cols=218 Identities=21% Similarity=0.181 Sum_probs=159.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEccc-ccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHL-GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-v~~~~~-~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------- 57 (286)
.|++|.++++||.++|+++|++ ++++.. .||++++.+. ..++|+|+||+||||.+
T Consensus 11 ~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~--~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~~~~~~~~~ 88 (373)
T TIGR01900 11 PSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFG--KASRVILAGHIDTVPIADNFPPKWLEPGDSLIREEIAH 88 (373)
T ss_pred CCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCC--CCCeEEEeCccccccCCCCChhhhccCccccccccccc
Confidence 3688999999999999999653 322222 3899997542 25789999999999741
Q ss_pred -----------CCCccHHHHHHHHHHHHHHHH--cCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhccc
Q 023187 58 -----------GIFDGSLGIITAISALKVLKS--TGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVS 124 (286)
Q Consensus 58 -----------g~~D~k~gv~a~l~a~~~L~~--~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~ 124 (286)
|+.|||+|++++|+|++.|++ .+. .++++|.|+|++|||.++ +..|++.+...
T Consensus 89 ~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~--~~~~~i~~~~~~dEE~~~---~~~G~~~~~~~--------- 154 (373)
T TIGR01900 89 AHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPET--ELKHDLTLIAYDCEEVAA---EKNGLGHIRDA--------- 154 (373)
T ss_pred ccccCCEEEecCchhhhHHHHHHHHHHHHHhhhcccc--CCCCCEEEEEEecccccC---CCCCHHHHHHh---------
Confidence 456999999999999999954 343 578899999999999742 11366654311
Q ss_pred CCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCC
Q 023187 125 DKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTV 204 (286)
Q Consensus 125 ~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~ 204 (286)
...+ ..++ ++ +..||+ + ..++.+++|..|++|+++|+++| ++.
T Consensus 155 ------------~~~~-----------~~~d---~~--iv~Ept------~--~~i~~g~~G~~~~~i~v~G~~~H-~s~ 197 (373)
T TIGR01900 155 ------------HPDW-----------LAAD---FA--IIGEPT------G--GGIEAGCNGNIRFDVTAHGVAAH-SAR 197 (373)
T ss_pred ------------Cccc-----------ccCC---EE--EEECCC------C--CcccccceeeEEEEEEEEeeccc-cCC
Confidence 0000 0011 11 233442 1 23567899999999999999999 579
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 205 PMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 205 P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
| +.|.|||.++++++.+|+++...... .++.....+++++.|++| .+.|+||++|++++|+|+.+.
T Consensus 198 p-~~g~NAi~~~~~~i~~l~~l~~~~~~------------~~~~~~~~t~~v~~I~GG-~~~nvVP~~a~~~~diR~~p~ 263 (373)
T TIGR01900 198 A-WLGDNAIHKAADIINKLAAYEAAEVN------------IDGLDYREGLNATFCEGG-KANNVIPDEARMHLNFRFAPD 263 (373)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhhccccc------------ccCCcccceEEEEEEeCC-CCCcccCCeEEEEEEEecCCC
Confidence 9 99999999999999999987532110 001112368999999999 899999999999999999875
Q ss_pred C
Q 023187 285 S 285 (286)
Q Consensus 285 ~ 285 (286)
+
T Consensus 264 ~ 264 (373)
T TIGR01900 264 K 264 (373)
T ss_pred c
Confidence 4
No 28
>PRK07522 acetylornithine deacetylase; Provisional
Probab=99.97 E-value=1.6e-30 Score=242.00 Aligned_cols=219 Identities=21% Similarity=0.226 Sum_probs=162.6
Q ss_pred CHHH-HHHHHHHHHHHHHcCCEEEEc-----ccccEEEEEcCCCCCCCEEEeeccCCCCCCC------------------
Q 023187 2 SPAS-VRAGNLIRQWMEDAGLRTWVD-----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------ 57 (286)
Q Consensus 2 s~~E-~~~~~~l~~~l~~~G~~v~~~-----~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------ 57 (286)
|++| .++++||+++|+++|+++++. ..+|+++++++. ..|.|+|.||+||||.+
T Consensus 20 s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~--~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i 97 (385)
T PRK07522 20 SRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPA--DRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRL 97 (385)
T ss_pred CCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCC--CCCeEEEEeecccccCCCCCCCCCCCceEEECCEE
Confidence 4555 599999999999999998652 236899998653 35899999999999853
Q ss_pred ---CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHH
Q 023187 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (286)
Q Consensus 58 ---g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~ 134 (286)
|+.|||++++++|++++.|.+.+ ++++|.|+|++|||.+ ..|++.+...
T Consensus 98 ~GrG~~D~Kg~~a~~l~a~~~l~~~~----~~~~i~~~~~~dEE~g-----~~G~~~l~~~------------------- 149 (385)
T PRK07522 98 YGRGTCDMKGFIAAALAAVPELAAAP----LRRPLHLAFSYDEEVG-----CLGVPSMIAR------------------- 149 (385)
T ss_pred EeccccccchHHHHHHHHHHHHHhCC----CCCCEEEEEEeccccC-----CccHHHHHHH-------------------
Confidence 67899999999999999998763 5689999999999973 2488876421
Q ss_pred HHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHH
Q 023187 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (286)
Q Consensus 135 l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~ 214 (286)
+.+.++.+| .+ +..+|. + ..++.+++|..+++|+++|+++| ++.| +.|.|||.
T Consensus 150 ~~~~~~~~d--------------~~---i~~ep~------~--~~~~~~~~G~~~~~i~v~G~~~H-s~~p-~~g~nAi~ 202 (385)
T PRK07522 150 LPERGVKPA--------------GC---IVGEPT------S--MRPVVGHKGKAAYRCTVRGRAAH-SSLA-PQGVNAIE 202 (385)
T ss_pred hhhcCCCCC--------------EE---EEccCC------C--CeeeeeecceEEEEEEEEeeccc-cCCC-ccCcCHHH
Confidence 111222111 11 222332 1 24667899999999999999999 5688 89999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 215 ~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++++|..|+++..+... .......+. .+.++++++.|++| .+.|+||++|++.+|+|+.+.+
T Consensus 203 ~~~~~i~~l~~~~~~~~~-----~~~~~~~~~--~~~~t~~i~~i~gG-~~~nviP~~a~~~~diR~~~~~ 265 (385)
T PRK07522 203 YAARLIAHLRDLADRLAA-----PGPFDALFD--PPYSTLQTGTIQGG-TALNIVPAECEFDFEFRNLPGD 265 (385)
T ss_pred HHHHHHHHHHHHHHHHhh-----cCCCCcCCC--CCcceeEEeeeecC-ccccccCCceEEEEEEccCCCC
Confidence 999999999987532110 000000000 12368999999988 8999999999999999998754
No 29
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=99.97 E-value=5e-30 Score=237.16 Aligned_cols=219 Identities=22% Similarity=0.281 Sum_probs=158.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE--cccccEEEEEcCCCCCCCEEEeeccCCCCCCCC------------C---CccH
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWV--DHLGNVHGRVEGLNASAQALLIGSHLDTVVDAG------------I---FDGS 63 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~--~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g------------~---~D~k 63 (286)
.|++|.++++||+++|+++|++++. ....|+++++++.. +.|.|+|+||+||||.+. . .+.+
T Consensus 14 ~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~-~~~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~~ 92 (363)
T TIGR01891 14 LSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGK-PGPVVALRADMDALPIQEQTDLPYKSTNPGVMHACGHD 92 (363)
T ss_pred CCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCC-CCCEEEEEeccCCCCcccccCCCcccCCCCceecCcCH
Confidence 4789999999999999999999875 23567999987643 348999999999998531 0 1124
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChh
Q 023187 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (286)
Q Consensus 64 ~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d 143 (286)
+++++++++++.|++.+. .++++|.|+|++|||.+ .|++.+.. .++.
T Consensus 93 ~~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~~------~G~~~~~~-----------------------~~~~-- 139 (363)
T TIGR01891 93 LHTAILLGTAKLLKKLAD--LLEGTVRLIFQPAEEGG------GGATKMIE-----------------------DGVL-- 139 (363)
T ss_pred HHHHHHHHHHHHHHhchh--hCCceEEEEEeecCcCc------chHHHHHH-----------------------CCCC--
Confidence 667777888888887654 67889999999999973 28776531 1211
Q ss_pred hHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 023187 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (286)
Q Consensus 144 ~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l 223 (286)
+.+...+-++.+++...+. ........++|..+++|+++|+++|| +.| +.|.|||.+|++++.++
T Consensus 140 -----------~~~d~~i~~e~~~~~~~~~--~~~~~~~~~~g~~~~~i~~~G~~~Ha-s~p-~~g~nAi~~~~~~i~~l 204 (363)
T TIGR01891 140 -----------DDVDAILGLHPDPSIPAGT--VGLRPGTIMAAADKFEVTIHGKGAHA-ARP-HLGRDALDAAAQLVVAL 204 (363)
T ss_pred -----------CCcCEEEEECCCCCCCCeE--EEECCCcceeecceEEEEEEeecccc-cCc-ccccCHHHHHHHHHHHH
Confidence 0111112133222111100 01112235789999999999999995 899 99999999999999999
Q ss_pred HHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
+++..+.. . .....+++++.|++| .+.|+||++|++.+|+|+.+.
T Consensus 205 ~~~~~~~~--------------~-~~~~~~~~i~~i~gG-~~~nvvP~~~~~~~diR~~~~ 249 (363)
T TIGR01891 205 QQIVSRNV--------------D-PSRPAVVTVGIIEAG-GAPNVIPDKASMSGTVRSLDP 249 (363)
T ss_pred HHHhhccC--------------C-CCCCcEEEEEEEEcC-CCCcEECCeeEEEEEEEeCCH
Confidence 98753311 0 113468999999999 799999999999999999864
No 30
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=99.97 E-value=5.1e-30 Score=239.64 Aligned_cols=214 Identities=23% Similarity=0.237 Sum_probs=164.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------------- 57 (286)
.|++|.++++||.++|+++|++ ++.+..+|+++.+ |. +.+.|+|.+|+||||.+
T Consensus 28 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~-g~--~~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGr 104 (395)
T TIGR03526 28 ESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYI-GH--GPKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGR 104 (395)
T ss_pred CCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEe-CC--CCCEEEEEeeccccCCCCcccccCCCCceEEECCEEEec
Confidence 3678999999999999999997 4667778999988 43 24789999999999963
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHh
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 137 (286)
|..|||++++++|.|++.|.+.+. .++.++.|+++++||+.+ ..|++.+. .+
T Consensus 105 G~~D~Kg~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~~~----g~~~~~~~----------------------~~ 156 (395)
T TIGR03526 105 GASDQEGGIASMVYAGKIIKDLGL--LDDYTLLVTGTVQEEDCD----GLCWQYII----------------------EE 156 (395)
T ss_pred CccccchhHHHHHHHHHHHHHcCC--CCCceEEEEEecccccCC----cHhHHHHH----------------------hc
Confidence 667999999999999999999886 677899999999999522 12333321 12
Q ss_pred CCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 023187 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (286)
Q Consensus 138 ~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a 217 (286)
.++.+ +. + +..||+ ...++.+++|..+++|+++|+++|| +.| +.|.|||.+++
T Consensus 157 ~~~~~------------d~--~---i~~ep~--------~~~i~~g~~G~~~~~v~v~G~~~Hs-~~p-~~g~nAi~~~~ 209 (395)
T TIGR03526 157 DKIKP------------EF--V---VITEPT--------DMNIYRGQRGRMEIKVTVKGVSCHG-SAP-ERGDNAIYKMA 209 (395)
T ss_pred cCCCC------------CE--E---EecCCC--------CceEEEEcceEEEEEEEEecCCCcc-CCC-CCCCCHHHHHH
Confidence 22222 11 1 223442 1346678999999999999999995 689 99999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++.+|+++..... .++.....+++++.|++|..+.|+||++|++++|+|+.+.+
T Consensus 210 ~~i~~l~~~~~~~~-------------~~~~~~~~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~ 264 (395)
T TIGR03526 210 PILKELSQLNANLV-------------EDPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGE 264 (395)
T ss_pred HHHHHHHHhhhhhc-------------CCcccCccceeeeeeecCCCCCCccCCeEEEEEEEecCCCC
Confidence 99999998754311 01122346899999998845899999999999999988654
No 31
>PRK08652 acetylornithine deacetylase; Provisional
Probab=99.97 E-value=4.3e-30 Score=235.72 Aligned_cols=202 Identities=24% Similarity=0.222 Sum_probs=157.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccc---cEEEEEcCCCCCCCEEEeeccCCCCCCC-------------CCCccHH
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG---NVHGRVEGLNASAQALLIGSHLDTVVDA-------------GIFDGSL 64 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~---nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------g~~D~k~ 64 (286)
.|++|.++++||.++|+++|++++.+..+ |+++ + ..|+|+|.||+||||.. |..|||+
T Consensus 17 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~---~---~~~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg 90 (347)
T PRK08652 17 PSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV---N---SKAELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKG 90 (347)
T ss_pred CCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc---C---CCCEEEEEccccccCCCCCCEEECCEEEeccchhhhH
Confidence 37899999999999999999998875543 4554 2 24899999999999862 7889999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhh
Q 023187 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (286)
Q Consensus 65 gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~ 144 (286)
+++++|+|++.|.+.. ++++|.|+|++|||.++ .|++.+.. + +.
T Consensus 91 ~~a~~l~a~~~l~~~~----~~~~v~~~~~~dEE~g~-----~G~~~~~~----------------------~--~~--- 134 (347)
T PRK08652 91 GVAAILLALEELGKEF----EDLNVGIAFVSDEEEGG-----RGSALFAE----------------------R--YR--- 134 (347)
T ss_pred HHHHHHHHHHHHhhcc----cCCCEEEEEecCcccCC-----hhHHHHHH----------------------h--cC---
Confidence 9999999999998653 46799999999999742 37775421 1 11
Q ss_pred HHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 023187 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (286)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~ 224 (286)
++ ++ ++.+|+. ..++.+++|..+++|+++|+++| ++.| +.|.|||.++++++.+|+
T Consensus 135 ---------~d--~~---i~~ep~~--------~~i~~~~~g~~~~~i~~~G~~~H-~s~p-~~g~nAi~~~a~~i~~l~ 190 (347)
T PRK08652 135 ---------PK--MA---IVLEPTD--------LKVAIAHYGNLEAYVEVKGKPSH-GACP-ESGVNAIEKAFEMLEKLK 190 (347)
T ss_pred ---------CC--EE---EEecCCC--------CceeeecccEEEEEEEEEeeecc-cCCC-CcCcCHHHHHHHHHHHHH
Confidence 11 12 6666641 23567899999999999999999 6799 899999999999999999
Q ss_pred HHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
++...... .. ....+++.|++| .+.|+||++|++++|+|+.+.+
T Consensus 191 ~~~~~~~~--------------~~--~~~~~~~~i~gg-~~~nviP~~~~~~~diR~~~~~ 234 (347)
T PRK08652 191 ELLKALGK--------------YF--DPHIGIQEIIGG-SPEYSIPALCRLRLDARIPPEV 234 (347)
T ss_pred HHHHhhhc--------------cc--CCCCcceeeecC-CCCCccCCcEEEEEEEEcCCCC
Confidence 87543110 01 124567779988 8899999999999999998754
No 32
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=99.97 E-value=5.6e-30 Score=235.34 Aligned_cols=196 Identities=18% Similarity=0.224 Sum_probs=155.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCC-------------CCCCccHHHHHH
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD-------------AGIFDGSLGIIT 68 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~-------------~g~~D~k~gv~a 68 (286)
|++|.++++||+++|+++|+++++++.+|++. .| .+.|+|+||+||||. -|+.|||+|+++
T Consensus 26 s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~--~g----~~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa 99 (346)
T PRK00466 26 SGNETNATKFFEKISNELNLKLEILPDSNSFI--LG----EGDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLIS 99 (346)
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEEecCCCcEe--cC----CCeEEEEeccccCCCCCCceeeCCEEEecCccccchHHHH
Confidence 67899999999999999999999888888764 34 267999999999997 388999999999
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhh
Q 023187 69 AISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLL 148 (286)
Q Consensus 69 ~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~ 148 (286)
+|++++.|++.+ .+|.|+|++|||.+ ..|++.+. +.++.+
T Consensus 100 ~l~a~~~l~~~~------~~i~~~~~~dEE~g-----~~G~~~l~-----------------------~~~~~~------ 139 (346)
T PRK00466 100 MIIAAWLLNEKG------IKVMVSGLADEEST-----SIGAKELV-----------------------SKGFNF------ 139 (346)
T ss_pred HHHHHHHHHHcC------CCEEEEEEcCcccC-----CccHHHHH-----------------------hcCCCC------
Confidence 999999998765 25899999999973 24777653 122221
Q ss_pred hccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc
Q 023187 149 QLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCK 228 (286)
Q Consensus 149 ~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~ 228 (286)
+. + +..||. + ...++.+++|..+++|+++|+++| ++.| + .|||.+|++++.+|++...
T Consensus 140 ------d~--~---i~~ep~------~-~~~i~~~~kG~~~~~i~v~G~~~H-as~p-~--~nAi~~~~~~l~~l~~~~~ 197 (346)
T PRK00466 140 ------KH--I---IVGEPS------N-GTDIVVEYRGSIQLDIMCEGTPEH-SSSA-K--SNLIVDISKKIIEVYKQPE 197 (346)
T ss_pred ------CE--E---EEcCCC------C-CCceEEEeeEEEEEEEEEEeeccc-cCCC-C--cCHHHHHHHHHHHHHhccc
Confidence 11 1 333442 1 124677899999999999999999 5678 5 5999999999998876422
Q ss_pred CCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 229 HPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
. . ...+++++.|++| ++.|+||++|++++|+|+.+.+
T Consensus 198 ~------------------~-~~~t~~~~~i~gG-~~~NvvP~~a~~~~diR~~p~~ 234 (346)
T PRK00466 198 N------------------Y-DKPSIVPTIIRAG-ESYNVTPAKLYLHFDVRYAINN 234 (346)
T ss_pred c------------------C-CCCcceeeEEecC-CcCcccCCceEEEEEEEeCCCC
Confidence 1 1 3468899999998 9999999999999999998754
No 33
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=99.97 E-value=1.6e-29 Score=233.32 Aligned_cols=211 Identities=21% Similarity=0.182 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcc------cccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------------
Q 023187 5 SVRAGNLIRQWMEDAGLRTWVDH------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (286)
Q Consensus 5 E~~~~~~l~~~l~~~G~~v~~~~------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------- 57 (286)
|.++++||+++|+++|++++++. .+|+++.++++ +.+.|+|.+|+||||.+
T Consensus 17 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~--~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~Gr 94 (364)
T TIGR01892 17 NVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPS--GAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGR 94 (364)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCC--CCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEec
Confidence 47999999999999999987643 46899998653 35789999999999863
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHh
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 137 (286)
|+.|||++++++|++++.|++. .++++|.|+|++|||.+ +.|++.+..
T Consensus 95 G~~D~Kg~~a~~l~a~~~l~~~----~~~~~v~~~~~~~EE~g-----~~G~~~~~~----------------------- 142 (364)
T TIGR01892 95 GTCDMKGFLACALAAAPDLAAE----QLKKPLHLALTADEEVG-----CTGAPKMIE----------------------- 142 (364)
T ss_pred CccccchHHHHHHHHHHHHHhc----CcCCCEEEEEEeccccC-----CcCHHHHHH-----------------------
Confidence 5679999999999999999876 35789999999999973 248876532
Q ss_pred CC-CChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHH
Q 023187 138 NS-IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAA 216 (286)
Q Consensus 138 ~g-~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~ 216 (286)
.+ +.+ + .+ +..+|+ + ..++.+++|..+++|+++|+++|+ +.| +.|.|||.++
T Consensus 143 ~~~~~~------------d--~~---i~~ep~------~--~~~~~~~~G~~~~~v~v~G~~~Hs-~~p-~~g~nAi~~~ 195 (364)
T TIGR01892 143 AGAGRP------------R--HA---IIGEPT------R--LIPVRAHKGYASAEVTVRGRSGHS-SYP-DSGVNAIFRA 195 (364)
T ss_pred hcCCCC------------C--EE---EECCCC------C--ceeEEeeceEEEEEEEEEcccccc-cCC-ccCcCHHHHH
Confidence 11 111 1 11 223432 1 124457899999999999999995 689 9999999999
Q ss_pred HHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 217 AELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 217 a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
++++.+|+++...... ....... ..+.++++++.|++| .+.|+||++|++.+|+|+.+.+
T Consensus 196 ~~~i~~l~~~~~~~~~------~~~~~~~--~~~~~~~~i~~i~gg-~~~nviP~~~~~~~diR~~p~~ 255 (364)
T TIGR01892 196 GRFLQRLVHLADTLLR------EDLDEGF--TPPYTTLNIGVIQGG-KAVNIIPGACEFVFEWRPIPGM 255 (364)
T ss_pred HHHHHHHHHHHHHhcc------CCCCccC--CCCCceEEEeeeecC-CCCcccCCeEEEEEEeecCCCC
Confidence 9999999987532110 0000000 012468999999998 8999999999999999998654
No 34
>PRK09133 hypothetical protein; Provisional
Probab=99.97 E-value=1.8e-29 Score=241.16 Aligned_cols=234 Identities=21% Similarity=0.236 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHHHHHcCCEEE---Ec----ccccEEEEEcCCCCCCCEEEeeccCCCCCCC------------------
Q 023187 3 PASVRAGNLIRQWMEDAGLRTW---VD----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------ 57 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~---~~----~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------ 57 (286)
++|.++++||.++|+++|++++ .+ ..+|++++++|..+ .+.|+|++|+||||.+
T Consensus 56 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~-~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~i 134 (472)
T PRK09133 56 GSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDP-KKPILLLAHMDVVEAKREDWTRDPFKLVEENGYF 134 (472)
T ss_pred cchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCC-CCcEEEEeecccCCCChhcCCCCCCcceEeCCEE
Confidence 5789999999999999999753 22 34789999977543 4889999999999963
Q ss_pred ---CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHH
Q 023187 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (286)
Q Consensus 58 ---g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~ 134 (286)
|+.|||++++++|++++.|++.+. .++++|.|+|++|||.+ ++.|++.+....
T Consensus 135 yGRGa~D~Kg~~aa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~~----g~~G~~~l~~~~------------------ 190 (472)
T PRK09133 135 YGRGTSDDKADAAIWVATLIRLKREGF--KPKRDIILALTGDEEGT----PMNGVAWLAENH------------------ 190 (472)
T ss_pred EecCcccchHHHHHHHHHHHHHHhcCC--CCCCCEEEEEECccccC----ccchHHHHHHHH------------------
Confidence 667999999999999999999886 78899999999999942 235777653210
Q ss_pred HHhCCCChhhHHhhhccCCCccccceEEeeccCCccc-c--cCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCC
Q 023187 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVL-E--WVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 211 (286)
Q Consensus 135 l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~-~--~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~n 211 (286)
. ..+.+ + .+ +. |++... . .......++.++||..+++|+++|+++| +|.| + +.|
T Consensus 191 -~-~~~~~------------~--~~---i~-e~~~~~~~~~gept~~~i~~g~kG~~~~~i~v~G~~~H-ss~p-~-~~n 247 (472)
T PRK09133 191 -R-DLIDA------------E--FA---LN-EGGGGTLDEDGKPVLLTVQAGEKTYADFRLEVTNPGGH-SSRP-T-KDN 247 (472)
T ss_pred -h-hccCe------------E--EE---EE-CCCccccCCCCCceEEEeeeecceeEEEEEEEecCCCC-CCCC-C-CCC
Confidence 0 00111 1 11 33 443200 0 0011223557899999999999999999 5789 6 599
Q ss_pred HHHHHHHHHHHHHHHhcCCCC--Ccc-c-------CC------------CCCcc------ccccC---CCCeEEEEEEEe
Q 023187 212 PMTAAAELIVLLERLCKHPKD--FLS-Y-------DG------------RSNCS------TLESL---SSSLVCTVGEIS 260 (286)
Q Consensus 212 Ai~~~a~~i~~l~~~~~~~~~--~~~-~-------~~------------~~~~~------~~~~~---~~~~~~~~g~i~ 260 (286)
||..++++|.+|+++...... ... + .+ ..... ...+. ...++++++.|+
T Consensus 248 Ai~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~ 327 (472)
T PRK09133 248 AIYRLAAALSRLAAYRFPVMLNDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLE 327 (472)
T ss_pred hHHHHHHHHHHHhhCCCCCccCCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEe
Confidence 999999999999875221000 000 0 00 00000 00000 135689999999
Q ss_pred ecCCccceecCeEEEEEEEecCCCC
Q 023187 261 SWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 261 ~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+| .+.|+||++|++++|+|+.+..
T Consensus 328 gG-~~~NvVP~~a~~~lDiR~~p~~ 351 (472)
T PRK09133 328 GG-HAENALPQRATANVNCRIFPGD 351 (472)
T ss_pred cC-CcCccCCCceEEEEEEEeCCch
Confidence 99 9999999999999999998643
No 35
>PRK05111 acetylornithine deacetylase; Provisional
Probab=99.97 E-value=1.8e-29 Score=234.84 Aligned_cols=211 Identities=23% Similarity=0.255 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcc------cccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------------
Q 023187 5 SVRAGNLIRQWMEDAGLRTWVDH------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (286)
Q Consensus 5 E~~~~~~l~~~l~~~G~~v~~~~------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------- 57 (286)
|.++++||+++|+++|++++.+. ..|+++++ |.. .+.|+|.||+||||.+
T Consensus 31 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~-g~~--~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~Gr 107 (383)
T PRK05111 31 NRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASL-GSG--EGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGL 107 (383)
T ss_pred hHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEe-CCC--CCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEec
Confidence 57899999999999999987543 35899999 432 3679999999999853
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHh
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 137 (286)
|+.|||++++++|++++.|++.+ ++++|.|+|++|||.+ ..|++.+.. +
T Consensus 108 G~~D~Kg~~a~~l~a~~~l~~~~----~~~~i~~~~~~~EE~g-----~~G~~~~~~----------------------~ 156 (383)
T PRK05111 108 GTADMKGFFAFILEALRDIDLTK----LKKPLYILATADEETS-----MAGARAFAE----------------------A 156 (383)
T ss_pred ccccccHHHHHHHHHHHHHhhcC----CCCCeEEEEEeccccC-----cccHHHHHh----------------------c
Confidence 67899999999999999998753 5688999999999973 247776531 1
Q ss_pred CCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 023187 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (286)
Q Consensus 138 ~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a 217 (286)
..+.+ + ++ +..||+ . ..++.+++|..+++|+++|+++| ++.| +.|.|||..++
T Consensus 157 ~~~~~------------d--~~---i~~ep~------~--~~~~~~~~G~~~~~i~v~G~~~H-~~~p-~~g~nai~~~~ 209 (383)
T PRK05111 157 TAIRP------------D--CA---IIGEPT------S--LKPVRAHKGHMSEAIRITGQSGH-SSDP-ALGVNAIELMH 209 (383)
T ss_pred CCCCC------------C--EE---EEcCCC------C--CceeecccceEEEEEEEEeechh-ccCC-ccCcCHHHHHH
Confidence 11111 1 11 223432 1 12456799999999999999999 5899 99999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++..|+++...... ......+ . ...++++++.|++| ...|+||++|++.+|+|+.+.+
T Consensus 210 ~~i~~l~~~~~~~~~------~~~~~~~-~-~~~~t~~i~~i~gg-~~~NvVP~~~~~~~diR~~p~~ 268 (383)
T PRK05111 210 DVIGELLQLRDELQE------RYHNPAF-T-VPYPTLNLGHIHGG-DAPNRICGCCELHFDIRPLPGM 268 (383)
T ss_pred HHHHHHHHHHHHHhc------cCCCccC-C-CCCCceeEeeeecC-CcCcccCCceEEEEEEecCCCC
Confidence 999999886432100 0000000 0 13568999999999 8999999999999999998754
No 36
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.97 E-value=7.6e-29 Score=228.08 Aligned_cols=213 Identities=19% Similarity=0.171 Sum_probs=158.2
Q ss_pred CCHHHHHHHHHHHHHHHHc-CCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------CCCccHH
Q 023187 1 MSPASVRAGNLIRQWMEDA-GLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------GIFDGSL 64 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~-G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------g~~D~k~ 64 (286)
.|++|.++++||+++|+++ |+++... ..|+++++.+. ..+.|+|.+|+||||.+ |..|||+
T Consensus 22 ~s~~e~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~--~~~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg 98 (352)
T PRK13007 22 VSGDEKALADAVEAALRALPHLEVIRH-GNSVVARTDLG--RPSRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKS 98 (352)
T ss_pred CCchHHHHHHHHHHHHHhCcCceEEec-CCeEEEEccCC--CCCeEEEEccccccCCCCCCCcceeCCEEEccCcccccH
Confidence 4789999999999999996 8887654 35799998432 23679999999999963 5679999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhh
Q 023187 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (286)
Q Consensus 65 gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~ 144 (286)
+++++|++++.|. +++++|.|+|++|||.++. ..|++.+.... ...+.
T Consensus 99 ~~a~~l~a~~~l~------~~~~~i~~~~~~~EE~~~~---~~G~~~~~~~~--------------------~~~~~--- 146 (352)
T PRK13007 99 GLAVMLHLAATLA------EPAHDLTLVFYDCEEVEAE---ANGLGRLAREH--------------------PEWLA--- 146 (352)
T ss_pred HHHHHHHHHHHhh------ccCCCeEEEEEecccccCC---cccHHHHHHhc--------------------ccccC---
Confidence 9999999999983 4678999999999997431 12665442100 00011
Q ss_pred HHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 023187 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (286)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~ 224 (286)
++ .+ +..||. . ..++.+++|..+++|+++|+++|| +.| +.|.|||.+++++|.+|+
T Consensus 147 ---------~d--~~---i~~ep~------~--~~i~~~~~G~~~~~i~v~G~~~Hs-~~p-~~g~nAi~~~~~~i~~l~ 202 (352)
T PRK13007 147 ---------GD--FA---ILLEPT------D--GVIEAGCQGTLRVTVTFHGRRAHS-ARS-WLGENAIHKAAPVLARLA 202 (352)
T ss_pred ---------CC--EE---EEecCC------C--CceEeeccceEEEEEEEEeccccc-CCC-ccCcCHHHHHHHHHHHHH
Confidence 11 11 333442 1 235578999999999999999994 689 999999999999999999
Q ss_pred HHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
++..+... ........+++++.|++| .+.|+||++|++++|+|+.+.+
T Consensus 203 ~~~~~~~~------------~~~~~~~~~~~~~~i~gG-~~~nviP~~a~~~~diR~~p~~ 250 (352)
T PRK13007 203 AYEPREVV------------VDGLTYREGLNAVRISGG-VAGNVIPDECVVNVNYRFAPDR 250 (352)
T ss_pred Hhcccccc------------cCCCCccceeEeEeEecC-CcCccCCCeEEEEEEEeeCCCC
Confidence 86543210 000111347899999988 8999999999999999998754
No 37
>PRK13381 peptidase T; Provisional
Probab=99.97 E-value=5.5e-29 Score=233.33 Aligned_cols=204 Identities=18% Similarity=0.149 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC------------------------
Q 023187 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------------ 57 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------------ 57 (286)
..|.++++||+++|+++|++ ++.+..+||+++++|+.++.|+|+|+||+||||.+
T Consensus 28 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~ 107 (404)
T PRK13381 28 PGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDVGLSPDIHPQILRFDGGDLCLNAEQG 107 (404)
T ss_pred hhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCccCCCCcCcEEEecCCCceecCCccc
Confidence 46889999999999999994 66788889999998764445899999999999854
Q ss_pred -----------------------CC----CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchh
Q 023187 58 -----------------------GI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSA 110 (286)
Q Consensus 58 -----------------------g~----~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~ 110 (286)
|. .|||+|++++|.|++.|.+.+ .++++|.|+|++|||.+ +.|++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~---~~~g~i~~~~~~dEE~g-----~~G~~ 179 (404)
T PRK13381 108 IWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE---VEHGDIVVAFVPDEEIG-----LRGAK 179 (404)
T ss_pred eeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC---CCCCCEEEEEEcccccc-----cccHH
Confidence 23 899999999999999998875 46889999999999983 24777
Q ss_pred HhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEE
Q 023187 111 ALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRL 190 (286)
Q Consensus 111 ~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~ 190 (286)
.+. ..++.+ +.. ++++.+. +..++.+++|..|+
T Consensus 180 ~~~-----------------------~~~~~~------------d~~-----~~~~~~~-------~~~i~~~~~G~~~~ 212 (404)
T PRK13381 180 ALD-----------------------LARFPV------------DFA-----YTIDCCE-------LGEVVYENFNAASA 212 (404)
T ss_pred HHH-----------------------HhcCCC------------CEE-----EEecCCC-------cceEEEecCcceEE
Confidence 542 112211 111 2222221 12356679999999
Q ss_pred EEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceec
Q 023187 191 KVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIP 270 (286)
Q Consensus 191 ~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP 270 (286)
+|+++|+++|+++.| +.|.|||.++++++.+|+++..+... .....+++++.|.++ |
T Consensus 213 ~v~v~Gk~aHa~~~p-~~g~NAI~~a~~~i~~l~~~~~~~~~---------------~~~~~~i~v~~i~g~-------p 269 (404)
T PRK13381 213 EITITGVTAHPMSAK-GVLVNPILMANDFISHFPRQETPEHT---------------EGREGYIWVNDLQGN-------V 269 (404)
T ss_pred EEEEEeEecCCCCCc-ccCcCHHHHHHHHHHhCCccCCCCCC---------------CCcccEEEEEeEEeC-------c
Confidence 999999999965568 99999999999999998875332110 012235677766542 8
Q ss_pred CeEEEEEEEecCCC
Q 023187 271 GEIIVTGYIHCGFT 284 (286)
Q Consensus 271 ~~~~~~~diR~~~~ 284 (286)
++|++++|+|+.+.
T Consensus 270 ~~~~~~~diR~~~~ 283 (404)
T PRK13381 270 NKAKLKLIIRDFDL 283 (404)
T ss_pred ceEEEEEEEecCCH
Confidence 99999999998764
No 38
>PRK08596 acetylornithine deacetylase; Validated
Probab=99.97 E-value=1.1e-28 Score=232.48 Aligned_cols=216 Identities=19% Similarity=0.177 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEc----ccccEEEEEcCCCCC-CCEEEeeccCCCCCCC--------------------
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVD----HLGNVHGRVEGLNAS-AQALLIGSHLDTVVDA-------------------- 57 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~----~~~nv~a~~~g~~~~-~~~l~~~~H~DtV~~~-------------------- 57 (286)
++|.++++||+++|+++|++++++ ..+|++++++|..+. .|+|+|+||+||||.+
T Consensus 33 ~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~ly 112 (421)
T PRK08596 33 RNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLY 112 (421)
T ss_pred hhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEE
Confidence 478999999999999999998763 357899999775332 3679999999999863
Q ss_pred --CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHH
Q 023187 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (286)
Q Consensus 58 --g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l 135 (286)
|..|||++++++|+|++.|++.+. .++++|.|+|++|||.+ ..|++.+.
T Consensus 113 GrG~~D~Kgg~a~~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g-----~~G~~~~~---------------------- 163 (421)
T PRK08596 113 GRGAADMKGGLAGALFAIQLLHEAGI--ELPGDLIFQSVIGEEVG-----EAGTLQCC---------------------- 163 (421)
T ss_pred eccccccchHHHHHHHHHHHHHHcCC--CCCCcEEEEEEeccccC-----CcCHHHHH----------------------
Confidence 567999999999999999999887 78899999999999974 24777653
Q ss_pred HhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEec----------CCCCCCCC
Q 023187 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS----------QGHAGTVP 205 (286)
Q Consensus 136 ~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~----------~~Hags~P 205 (286)
+.++.+| ++ ++.||+. . .+.+++|...++++++|+ ++|+ +.|
T Consensus 164 -~~~~~~d--------------~~---i~~ep~~------~---~~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~-~~p 215 (421)
T PRK08596 164 -ERGYDAD--------------FA---VVVDTSD------L---HMQGQGGVITGWITVKSPQTFHDGTRRQMIHA-GGG 215 (421)
T ss_pred -hcCCCCC--------------EE---EECCCCC------C---ccccccceeeEEEEEEeecccccccccccccc-cCC
Confidence 1222211 12 5555532 1 125689988888888876 4795 589
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 206 MSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 206 ~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+.|.|||.+++++|.+|+++...+. +.... ... .....+++++.|++| ...|+||++|++.+|+|+.+..
T Consensus 216 -~~G~nai~~~~~~i~~l~~~~~~~~-~~~~~-----~~~--~~~~~t~~v~~i~gG-~~~nvvP~~~~~~~d~R~~p~~ 285 (421)
T PRK08596 216 -LFGASAIEKMMKIIQSLQELERHWA-VMKSY-----PGF--PPGTNTINPAVIEGG-RHAAFIADECRLWITVHFYPNE 285 (421)
T ss_pred -ccCcCHHHHHHHHHHHHHHHHHHHh-hcccC-----ccC--CCCCcceeeeeeeCC-CCCCccCceEEEEEEeeeCCCC
Confidence 9999999999999999998742210 00000 000 013468999999999 9999999999999999998754
No 39
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=99.97 E-value=7.2e-29 Score=231.78 Aligned_cols=222 Identities=20% Similarity=0.160 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHHHcCCE-EEEcc----------cccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------
Q 023187 4 ASVRAGNLIRQWMEDAGLR-TWVDH----------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------- 57 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~-v~~~~----------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------- 57 (286)
+|.++++||+++|+++|++ ++... .+|++++++|.. ..++|+|.||+||||.+
T Consensus 28 ~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~-~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~ 106 (400)
T PRK13983 28 GEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGD-GKRTLWIISHMDVVPPGDLSLWETDPFKPVVK 106 (400)
T ss_pred cHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCC-CCCeEEEEeeccccCCCCcccccCCCCcceee
Confidence 5899999999999999998 76421 478999997753 34799999999999964
Q ss_pred -------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCc
Q 023187 58 -------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (286)
Q Consensus 58 -------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~ 130 (286)
|..|||+|++++|.+++.|.+.+. .++++|.|+|++|||.++ ..|++.+....
T Consensus 107 ~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~----~~g~~~~~~~~-------------- 166 (400)
T PRK13983 107 DGKIYGRGSEDNGQGIVSSLLALKALMDLGI--RPKYNLGLAFVSDEETGS----KYGIQYLLKKH-------------- 166 (400)
T ss_pred CCEEEecCccCccchHHHHHHHHHHHHHhCC--CCCCcEEEEEEeccccCC----cccHHHHHhhc--------------
Confidence 468999999999999999999887 788999999999999742 12666553210
Q ss_pred HHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCC
Q 023187 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQ 210 (286)
Q Consensus 131 ~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~ 210 (286)
.+.. . ..+.. +..+.+. +++. .++.+++|..+++|+++|+++|+ +.| +.|+
T Consensus 167 -------~~~~-----------~--~~d~~--i~~~~~~---~~~~--~i~~~~~G~~~~~v~v~G~~~Hs-~~p-~~g~ 217 (400)
T PRK13983 167 -------PELF-----------K--KDDLI--LVPDAGN---PDGS--FIEIAEKSILWLKFTVKGKQCHA-STP-ENGI 217 (400)
T ss_pred -------cccc-----------C--CCCEE--EEecCCC---CCCc--eeEEeecceEEEEEEEEeEcccc-CCC-CCCC
Confidence 0110 0 00111 1122221 1222 24567999999999999999995 689 9999
Q ss_pred CHHHHHHHHHHHHHH-HhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 211 DPMTAAAELIVLLER-LCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 211 nAi~~~a~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
|||..+++++..+++ +...... . ...+. ....+++++.+.+|..+.|+||++|++++|+|+.+.+
T Consensus 218 nAi~~~~~~i~~l~~~~~~~~~~------~--~~~~~--~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~ 283 (400)
T PRK13983 218 NAHRAAADFALELDEALHEKFNA------K--DPLFD--PPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDY 283 (400)
T ss_pred CHHHHHHHHHHHHHHHHHhhhcc------c--ccccC--CCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCC
Confidence 999999999999987 4322100 0 00000 1224567788887756899999999999999998654
No 40
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.96 E-value=4.2e-29 Score=238.79 Aligned_cols=213 Identities=20% Similarity=0.222 Sum_probs=156.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCC--CCCCEEEeeccCCCCCCCCC--------------------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDAGI-------------------- 59 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~--~~~~~l~~~~H~DtV~~~g~-------------------- 59 (286)
|++|.++++||+++|+++|++++++..+|++++++|.. ++.|+|+|.||+||||+++.
T Consensus 20 s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i 99 (477)
T TIGR01893 20 SKNEKEVSNFIVNWAKKLGLEVKQDEVGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWL 99 (477)
T ss_pred CccHHHHHHHHHHHHHHcCCeEEEeCCCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEE
Confidence 67899999999999999999999999999999997642 24589999999999998642
Q ss_pred --------CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhccc-ccchhcccCCC--C
Q 023187 60 --------FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL-PVSALRVSDKS--G 128 (286)
Q Consensus 60 --------~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~-~~~~~~~~~~~--g 128 (286)
.|||+|++++|++++. .+ .++++|.|+|++|||+ ++.||+.+.... ..+++-..|.. +
T Consensus 100 ~GrG~~lg~D~k~gva~~l~~~~~---~~---~~~~~i~~~~~~dEE~-----g~~Gs~~l~~~~~~~~~~~~~d~~~~~ 168 (477)
T TIGR01893 100 KARGTTLGADNGIGVAMGLAILED---NN---LKHPPLELLFTVDEET-----GMDGALGLDENWLSGKILINIDSEEEG 168 (477)
T ss_pred EECCccccccccHHHHHHHHHHhc---CC---CCCCCEEEEEEecccc-----CchhhhhcChhhcCCcEEEEecCCCCC
Confidence 2999999988887753 33 3567999999999997 356898875421 11111111100 0
Q ss_pred CcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEe-cCCCCCCCCCC
Q 023187 129 VTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG-SQGHAGTVPMS 207 (286)
Q Consensus 129 ~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G-~~~Hags~P~~ 207 (286)
..+ .|..+ ...+.+++|+|+++ .++|..|++|+++| +++|||+.| +
T Consensus 169 ~~~------~g~~~-----------~~~~~~~~e~~~e~---------------~~kG~~~~~i~~~G~~~~Hsg~~p-~ 215 (477)
T TIGR01893 169 EFI------VGCAG-----------GRNVDITFPVKYEK---------------FTKNEEGYQISLKGLKGGHSGADI-H 215 (477)
T ss_pred eEE------EECCC-----------CeeEEEEEEEEEEe---------------cCCCceEEEEEEeCcCCCcCcccc-C
Confidence 000 00000 00123344455432 15899999999999 999988889 4
Q ss_pred CC-CCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 208 MR-QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 208 ~g-~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
.| .|||.+++++|.++++.. ..+++.+.+| ++.|+||++|++++|+|..+.
T Consensus 216 ~~r~nAi~~aa~~i~~l~~~~-------------------------~~~v~~~~gg-~~~N~ip~~~~~~~diR~~~~ 267 (477)
T TIGR01893 216 KGRANANKLMARVLNELKENL-------------------------NFRLSDIKGG-SKRNAIPREAKALIAIDENDV 267 (477)
T ss_pred CCCcCHHHHHHHHHHhhhhcC-------------------------CeEEEEEeCC-CcccccCCceEEEEEEChhHH
Confidence 66 699999999999887531 1467888888 999999999999999997653
No 41
>PRK08737 acetylornithine deacetylase; Provisional
Probab=99.96 E-value=7.8e-29 Score=229.23 Aligned_cols=201 Identities=16% Similarity=0.100 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcccc----cEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------CC
Q 023187 4 ASVRAGNLIRQWMEDAGLRTWVDHLG----NVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GI 59 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~v~~~~~~----nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------g~ 59 (286)
+|.++++||+++|+ |++++++..+ |+++.. | .|.|+|+||+||||.+ |+
T Consensus 28 ~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~-g----~~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa 100 (364)
T PRK08737 28 TTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVR-G----TPKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGV 100 (364)
T ss_pred CcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEc-C----CCeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECc
Confidence 57899999999997 9998876543 888863 4 2789999999999963 67
Q ss_pred CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCC
Q 023187 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (286)
Q Consensus 60 ~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g 139 (286)
.|||++++++|.+++. +.++|.|+|++|||.++ ..|++.+. +.+
T Consensus 101 ~DmKg~~aa~l~a~~~---------~~~~v~~~~~~dEE~g~----~~g~~~~~-----------------------~~~ 144 (364)
T PRK08737 101 CDIKGAAAALLAAANA---------GDGDAAFLFSSDEEAND----PRCVAAFL-----------------------ARG 144 (364)
T ss_pred ccchHHHHHHHHHHHc---------cCCCEEEEEEcccccCc----hhhHHHHH-----------------------HhC
Confidence 8999999999988752 24689999999999742 12555432 122
Q ss_pred CChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHH
Q 023187 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAEL 219 (286)
Q Consensus 140 ~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~ 219 (286)
..+ + ++ +..||+ . ..++.++||..|++|+++|+++| +|.|.+.|+|||.+++++
T Consensus 145 ~~~------------~---~~--iv~Ept------~--~~~~~~~kG~~~~~v~v~Gk~aH-as~p~~~G~NAI~~~~~~ 198 (364)
T PRK08737 145 IPY------------E---AV--LVAEPT------M--SEAVLAHRGISSVLMRFAGRAGH-ASGKQDPSASALHQAMRW 198 (364)
T ss_pred CCC------------C---EE--EEcCCC------C--ceeEEecceeEEEEEEEEeeccc-cCCCcccCCCHHHHHHHH
Confidence 221 1 11 333443 2 24567899999999999999999 577735899999999999
Q ss_pred HHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 220 IVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 220 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
|.++.+....... ....+ ....++++|.|++| .+.|+||++|++++|+|+.+.+
T Consensus 199 l~~~~~~~~~~~~----------~~~~~-~~~~t~~vg~i~GG-~~~NvVP~~a~~~~d~R~~p~~ 252 (364)
T PRK08737 199 GGQALDHVESLAH----------ARFGG-LTGLRFNIGRVEGG-IKANMIAPAAELRFGFRPLPSM 252 (364)
T ss_pred HHHHHHHHHhhhh----------hccCC-CCCCceEEeeEecC-CCCCcCCCceEEEEEeeeCCCC
Confidence 9887655322100 00011 13468999999999 9999999999999999998653
No 42
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=99.96 E-value=2.7e-28 Score=224.36 Aligned_cols=205 Identities=20% Similarity=0.232 Sum_probs=155.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC-------------CCCccHHHHHH
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------GIFDGSLGIIT 68 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------g~~D~k~gv~a 68 (286)
|++|.++++||.++|+++|++++.+..+|+++++++ ..|.|+|.||+||||.. |+.|||+++++
T Consensus 22 s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~i~~~~~---~~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~aa 98 (348)
T PRK04443 22 SGEEAAAAEFLVEFMESHGREAWVDEAGNARGPAGD---GPPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLAA 98 (348)
T ss_pred CCChHHHHHHHHHHHHHcCCEEEEcCCCcEEEEcCC---CCCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHHH
Confidence 678999999999999999999999888999999843 24899999999999852 67899999999
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhh
Q 023187 69 AISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLL 148 (286)
Q Consensus 69 ~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~ 148 (286)
+|+|++.| +. +++++|.|+|++|||.++ .|...+ +. .++.+|
T Consensus 99 ~l~A~~~l---~~--~~~~~i~~~~~~dEE~g~-----~~~~~~----------------------l~-~~~~~d----- 140 (348)
T PRK04443 99 FAAAAARL---EA--LVRARVSFVGAVEEEAPS-----SGGARL----------------------VA-DRERPD----- 140 (348)
T ss_pred HHHHHHHh---cc--cCCCCEEEEEEcccccCC-----hhHHHH----------------------HH-hccCCC-----
Confidence 99999998 33 578899999999999842 233322 11 112221
Q ss_pred hccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc
Q 023187 149 QLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCK 228 (286)
Q Consensus 149 ~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~ 228 (286)
++ +..||+ +. ..++.+++|..+++|+++|+++|| +.| |.|||..+++++..|+++..
T Consensus 141 ---------~~---iv~Ept------~~-~~i~~~~kG~~~~~l~~~G~~~Hs-s~~---g~NAi~~~~~~l~~l~~~~~ 197 (348)
T PRK04443 141 ---------AV---IIGEPS------GW-DGITLGYKGRLLVTYVATSESFHS-AGP---EPNAAEDAIEWWLAVEAWFE 197 (348)
T ss_pred ---------EE---EEeCCC------Cc-cceeeecccEEEEEEEEEeCCCcc-CCC---CCCHHHHHHHHHHHHHHHHh
Confidence 11 333543 11 135678999999999999999995 666 69999999999999988654
Q ss_pred CCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 229 HPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
... ..++.....+.+++.|+. ..|+||++|++.+|+|..+..
T Consensus 198 ~~~------------~~~~~~~~~~~~i~~i~~---~~n~iP~~~~~~~d~R~~p~~ 239 (348)
T PRK04443 198 AND------------GRERVFDQVTPKLVDFDS---SSDGLTVEAEMTVGLRLPPGL 239 (348)
T ss_pred cCc------------cccccccccceeeeEEec---CCCCCCceEEEEEEEccCCCC
Confidence 110 000122446778888873 469999999999999997653
No 43
>PRK06446 hypothetical protein; Provisional
Probab=99.96 E-value=3.9e-28 Score=229.76 Aligned_cols=228 Identities=18% Similarity=0.193 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEcc---cccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------------CCC
Q 023187 6 VRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GIF 60 (286)
Q Consensus 6 ~~~~~~l~~~l~~~G~~v~~~~---~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~----------------------g~~ 60 (286)
.++++||+++|+++|+++++.+ ..|+++++++. ..|+|+|+||+||||.+ |+.
T Consensus 25 ~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~--~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~ 102 (436)
T PRK06446 25 EETANYLKDTMEKLGIKANIERTKGHPVVYGEINVG--AKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGAS 102 (436)
T ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCC--CCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEecc
Confidence 7999999999999999987543 45699998542 35899999999999853 678
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCC
Q 023187 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~ 140 (286)
|||++++++|.|++.|++.+ .++.+|.|+|++|||.++ .|++.+... . ..++
T Consensus 103 DmKgglaa~l~A~~~l~~~~---~~~~~i~~~~~~dEE~g~-----~g~~~~l~~-------------------~-~~~~ 154 (436)
T PRK06446 103 DNKGTLMARLFAIKHLIDKH---KLNVNVKFLYEGEEEIGS-----PNLEDFIEK-------------------N-KNKL 154 (436)
T ss_pred CCcHHHHHHHHHHHHHHHcC---CCCCCEEEEEEcccccCC-----HhHHHHHHH-------------------H-HHHh
Confidence 99999999999999887665 467899999999999842 365544210 0 0011
Q ss_pred ChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEe--cCCCCCCCCCCCCCCHHHHHHH
Q 023187 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG--SQGHAGTVPMSMRQDPMTAAAE 218 (286)
Q Consensus 141 ~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G--~~~Hags~P~~~g~nAi~~~a~ 218 (286)
. ++ + +.+|++.... .+ ...++.++||..|++++++| +++| ++.| +.|.|||..+++
T Consensus 155 ~------------~d---~---vi~E~~~~~~-~~-~~~i~~~~kG~~~~~l~v~G~~~~~H-ss~p-~~g~NAi~~~~~ 212 (436)
T PRK06446 155 K------------AD---S---VIMEGAGLDP-KG-RPQIVLGVKGLLYVELVLRTGTKDLH-SSNA-PIVRNPAWDLVK 212 (436)
T ss_pred C------------CC---E---EEECCCCccC-CC-CeEEEEecCeEEEEEEEEEeCCCCCC-CCCC-ccCCCHHHHHHH
Confidence 1 11 1 1235543211 11 12467889999999999999 9999 5789 899999999999
Q ss_pred HHHHHHHHhcCC--CCC------cc-----------cC--------------CCCCccccccCCCCeEEEEEEEeecC--
Q 023187 219 LIVLLERLCKHP--KDF------LS-----------YD--------------GRSNCSTLESLSSSLVCTVGEISSWP-- 263 (286)
Q Consensus 219 ~i~~l~~~~~~~--~~~------~~-----------~~--------------~~~~~~~~~~~~~~~~~~~g~i~~g~-- 263 (286)
+|.+|++..... ..+ +. ++ ..............+++|++.|++|.
T Consensus 213 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~ 292 (436)
T PRK06446 213 LLSTLVDGEGRVLIPGFYDDVRELTEEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTG 292 (436)
T ss_pred HHHhhCCCCCCEEccchhcCCCCCCHHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccC
Confidence 999998642100 000 00 00 00000000011134788999998873
Q ss_pred -CccceecCeEEEEEEEecCCCC
Q 023187 264 -SASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 264 -~~~NvIP~~~~~~~diR~~~~~ 285 (286)
.+.|+||++|++++|+|+.+..
T Consensus 293 ~~~~nvvP~~a~~~~d~R~~p~~ 315 (436)
T PRK06446 293 KGSKTIVPSRAFAKLDFRLVPNQ 315 (436)
T ss_pred CCCCcEecCceEEEEEEEcCCCC
Confidence 3579999999999999998654
No 44
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=99.96 E-value=7.2e-28 Score=225.44 Aligned_cols=226 Identities=19% Similarity=0.133 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEc----ccccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------------
Q 023187 4 ASVRAGNLIRQWMEDAGLRTWVD----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~v~~~----~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------------- 57 (286)
+|.++++||+++|+++|++++.. ...|++++++|+.+..|+|+|.+|+||||.+
T Consensus 29 ~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGr 108 (400)
T TIGR01880 29 DYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYAR 108 (400)
T ss_pred cHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEc
Confidence 47899999999999999987532 2457999998754434899999999999852
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHh
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 137 (286)
|..|||++++++|++++.|++.+. +++++|.|+|++|||.++ ..|++.+...
T Consensus 109 G~~D~K~~~aa~l~a~~~l~~~~~--~~~~~v~l~~~~dEE~g~----~~G~~~~~~~---------------------- 160 (400)
T TIGR01880 109 GAQDMKCVGVQYLEAVRNLKASGF--KFKRTIHISFVPDEEIGG----HDGMEKFAKT---------------------- 160 (400)
T ss_pred ccccccHHHHHHHHHHHHHHHcCC--CCCceEEEEEeCCcccCc----HhHHHHHHHh----------------------
Confidence 456999999999999999999886 788999999999999742 2377655311
Q ss_pred CCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHH
Q 023187 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (286)
Q Consensus 138 ~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a 217 (286)
+... ..+. + +.++.+.. ++.+ ...++.+++|..+++|+++|+++|| +.| . +.|||..++
T Consensus 161 -~~~~----------~~~~--~---~~~d~g~~-~~~~-~~~i~~~~kG~~~~~l~v~G~~~Hs-~~~-~-~~nai~~l~ 219 (400)
T TIGR01880 161 -DEFK----------ALNL--G---FALDEGLA-SPDD-VYRVFYAERVPWWVVVTAPGNPGHG-SKL-M-ENTAMEKLE 219 (400)
T ss_pred -hhcc----------CCce--E---EEEcCCCc-cccc-ccceeEEeeEEEEEEEEEecCCCCC-CCC-C-CCCHHHHHH
Confidence 1000 0000 1 11122211 1111 1245678999999999999999995 666 4 479999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++..|+++...... ... .. ... .....++++++.|++| .+.|+||++|++.+|+|+.+.+
T Consensus 220 ~~i~~l~~~~~~~~~--~~~-~~--~~~-~~~~~~t~~v~~i~gG-~~~nvIP~~a~~~~diR~~p~~ 280 (400)
T TIGR01880 220 KSVESIRRFRESQFQ--LLQ-SN--PDL-AIGDVTSVNLTKLKGG-VQSNVIPSEAEAGFDIRLAPSV 280 (400)
T ss_pred HHHHHHHHhhHHHHH--HHh-cC--ccc-cccccceeecceeccC-CcCCcCCCccEEEEEEeeCCCC
Confidence 999988875311000 000 00 000 0112478999999999 8999999999999999988654
No 45
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=99.96 E-value=1.4e-27 Score=218.64 Aligned_cols=200 Identities=21% Similarity=0.247 Sum_probs=154.7
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC-------------CCCccHHHHHH
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------GIFDGSLGIIT 68 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------g~~D~k~gv~a 68 (286)
|++|.++++||+++|+++|++++.+..+|+++.. +. ..|+|+|.||+||||.. |+.|||+++++
T Consensus 13 s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~-~~--~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~aa 89 (336)
T TIGR01902 13 SGKEANAAKFLEEISKDLGLKLIIDDAGNFILGK-GD--GHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLIA 89 (336)
T ss_pred CcchHHHHHHHHHHHHHcCCEEEECCCCcEEEEe-CC--CCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHHH
Confidence 6789999999999999999999777778988876 32 35899999999999743 78899999999
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhh
Q 023187 69 AISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLL 148 (286)
Q Consensus 69 ~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~ 148 (286)
+|.+++.|++.+ .+|.|+|++|||.+ ..|++.+... ..
T Consensus 90 ~l~a~~~l~~~~------~~i~~~~~~dEE~g-----~~G~~~~~~~-----------------------~~-------- 127 (336)
T TIGR01902 90 MIFATWLLNEKG------IKVIVSGLVDEESS-----SKGAREVIDK-----------------------NY-------- 127 (336)
T ss_pred HHHHHHHHHhCC------CcEEEEEEeCcccC-----CccHHHHHhh-----------------------cC--------
Confidence 999999997643 57999999999983 3588765311 00
Q ss_pred hccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc
Q 023187 149 QLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCK 228 (286)
Q Consensus 149 ~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~ 228 (286)
++ ++ +..||+ +. ..+..+++|..+++++++|+++| ++.| + ||+.++..++..|.+...
T Consensus 128 -----~~--~~---ii~ept------~~-~~i~~~~kG~~~~~v~~~G~~~H-ss~~-~---~ai~~~~~~~~~l~~~~~ 185 (336)
T TIGR01902 128 -----PF--YV---IVGEPS------GA-EGITLGYKGSLQLKIMCEGTPFH-SSSA-G---NAAELLIDYSKKIIEVYK 185 (336)
T ss_pred -----CC--EE---EEecCC------CC-cceeeeeeeEEEEEEEEEecCcc-cCCC-h---hHHHHHHHHHHHHHHHhc
Confidence 11 12 334543 11 13567899999999999999999 5777 4 599999999999884322
Q ss_pred CCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 229 HPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
... .. +..+++++.+++| .+.|+||++|++++|+|+.+.+
T Consensus 186 ~~~---------------~~-~~~~~~~~~i~gg-~~~nvIP~~a~~~idiR~~p~~ 225 (336)
T TIGR01902 186 QPE---------------NY-DKPSIVPTIIRFG-ESYNDTPAKLELHFDLRYPPNN 225 (336)
T ss_pred ccc---------------CC-CCCcceeEEEEcc-CCCcCCCceEEEEEEEeeCCCC
Confidence 110 01 2346788999998 8999999999999999998654
No 46
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=99.96 E-value=2.6e-28 Score=229.20 Aligned_cols=204 Identities=18% Similarity=0.136 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcc-cccEEEEEcCCCC-CCCEEEeeccCCCCCC-------------CC--------
Q 023187 3 PASVRAGNLIRQWMEDAGLR-TWVDH-LGNVHGRVEGLNA-SAQALLIGSHLDTVVD-------------AG-------- 58 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-v~~~~-~~nv~a~~~g~~~-~~~~l~~~~H~DtV~~-------------~g-------- 58 (286)
++| +++++|+++|+++|++ +++|. .+||+|+++|+.. +.|+|+|.+|||||+. +|
T Consensus 31 ~~~-~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmDTv~~~~~~v~p~~~~~~~g~~~~~~~~ 109 (410)
T TIGR01882 31 GQL-TFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVDTADFNGENVNPQIIENYDGESIIQLGD 109 (410)
T ss_pred hHH-HHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecccCcCCCCCCCCEEEecCCCceeeecCC
Confidence 455 8999999999999996 99998 8999999987532 1499999999999984 11
Q ss_pred ------------------------------CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcc
Q 023187 59 ------------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLG 108 (286)
Q Consensus 59 ------------------------------~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~G 108 (286)
+.|||+|+|++|++++.|++.+. .++++|.|+|++|||.++ |
T Consensus 110 ~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~--~~~g~I~~~ft~dEE~g~------G 181 (410)
T TIGR01882 110 LEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE--IKHGTIRVAFTPDEEIGR------G 181 (410)
T ss_pred CCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC--CCCCCEEEEEECcccCCc------C
Confidence 25999999999999999988632 368899999999999743 7
Q ss_pred hhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecce
Q 023187 109 SAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQT 188 (286)
Q Consensus 109 s~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~ 188 (286)
++.+.. .++.. ..+ +|+.+. +++. +.....|..
T Consensus 182 a~~l~~-----------------------~~~~~--------------~~~---~~i~ge----p~g~---i~~~~~g~~ 214 (410)
T TIGR01882 182 AHKFDV-----------------------KDFNA--------------DFA---YTVDGG----PLGE---LEYETFSAA 214 (410)
T ss_pred cchhhh-----------------------hhcCc--------------cEE---EEeCCC----CCCe---EEEccccce
Confidence 765410 01100 011 333321 1121 333457899
Q ss_pred EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccce
Q 023187 189 RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNV 268 (286)
Q Consensus 189 ~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~Nv 268 (286)
+++|+++|+++|++..| +.+.|||..+++++..|...... ..++.+.+.+++| ..|.
T Consensus 215 ~~~I~v~Gk~aHa~~~~-~~g~nAi~~a~~~~~~l~~~~~~--------------------~~t~~~~g~i~~g--~i~g 271 (410)
T TIGR01882 215 AAKITIQGNNVHPGTAK-GKMINAAQIAIDLHNLLPEDDRP--------------------EYTEGREGFFHLL--SIDG 271 (410)
T ss_pred EEEEEEEEEecCcccCh-HHHHHHHHHHHHHHHhcCCcCCC--------------------ccccceeEEEEEE--eEEE
Confidence 99999999999965445 78999999999887655432110 1112234556665 4788
Q ss_pred ecCeEEEEEEEecCCCC
Q 023187 269 IPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 269 IP~~~~~~~diR~~~~~ 285 (286)
||++|++.+|+|+.+.+
T Consensus 272 iPd~a~l~~diR~~~~e 288 (410)
T TIGR01882 272 TVEEAKLHYIIRDFEKE 288 (410)
T ss_pred ecCEEEEEEEEecCCHH
Confidence 99999999999998753
No 47
>PRK05469 peptidase T; Provisional
Probab=99.96 E-value=1e-27 Score=224.97 Aligned_cols=205 Identities=18% Similarity=0.175 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcccccEEEEEcCCC-CCCCEEEeeccCCCCCCC-----------------------
Q 023187 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLN-ASAQALLIGSHLDTVVDA----------------------- 57 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-v~~~~~~nv~a~~~g~~-~~~~~l~~~~H~DtV~~~----------------------- 57 (286)
..|.++++||+++|+++|++ ++++..+||+++++|+. .+.|+|+|.|||||||..
T Consensus 29 ~~~~~~a~~l~~~l~~~G~~~~~~~~~~~v~~~~~g~~~~~~~~i~l~~H~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~ 108 (408)
T PRK05469 29 EGQWDLAKLLVEELKELGLQDVTLDENGYVMATLPANVDKDVPTIGFIAHMDTAPDFSGKNVKPQIIENYDGGDIALGDG 108 (408)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEECCCeEEEEEecCCCCCCCCeEEEEEeccCCCCCCCCCCCCEEeccCCCcceecCCC
Confidence 35899999999999999996 77888889999998752 245999999999999640
Q ss_pred ------------------------CC----CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcch
Q 023187 58 ------------------------GI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGS 109 (286)
Q Consensus 58 ------------------------g~----~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs 109 (286)
|. .|||+|++++|+|++.|++.+. .++++|.|+|++|||.+ .|+
T Consensus 109 ~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~--~~~g~v~~~f~~dEE~g------~Ga 180 (408)
T PRK05469 109 NEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE--IKHGDIRVAFTPDEEIG------RGA 180 (408)
T ss_pred ceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC--CCCCCEEEEEecccccC------CCH
Confidence 33 8999999999999999988765 57899999999999973 277
Q ss_pred hHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceE
Q 023187 110 AALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTR 189 (286)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~ 189 (286)
+.+.. . ++. .+ .+ +|+.+.+ .+ .+..+++|..+
T Consensus 181 ~~~~~---------------------~--~~~------------~~--~~---~~~~~~~----~g---~~~~~~~g~~~ 213 (408)
T PRK05469 181 DKFDV---------------------E--KFG------------AD--FA---YTVDGGP----LG---ELEYENFNAAS 213 (408)
T ss_pred HHhhh---------------------h--hcC------------Cc--EE---EEecCCC----cc---eEEeccCceeE
Confidence 75420 0 110 00 11 3443321 11 13445789999
Q ss_pred EEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCcccee
Q 023187 190 LKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVI 269 (286)
Q Consensus 190 ~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvI 269 (286)
++|+++|+++|+++.| +.|.|||.++++++..|+++..... +.....+++++.|++|
T Consensus 214 ~~i~v~Gk~~Ha~~~p-~~g~nAi~~~~~~i~~l~~~~~~~~---------------~~~~~~~i~~g~i~gg------- 270 (408)
T PRK05469 214 AKITIHGVNVHPGTAK-GKMVNALLLAADFHAMLPADETPET---------------TEGYEGFYHLTSIKGT------- 270 (408)
T ss_pred EEEEEeeecCCCCCCc-ccccCHHHHHHHHHHhCCCCCCCCC---------------CCCceEEEEEEEEEEc-------
Confidence 9999999999976679 9999999999999988776432210 0111234566666654
Q ss_pred cCeEEEEEEEecCCCC
Q 023187 270 PGEIIVTGYIHCGFTS 285 (286)
Q Consensus 270 P~~~~~~~diR~~~~~ 285 (286)
|++|++++|+|+.+.+
T Consensus 271 p~~~~i~~diR~~~~e 286 (408)
T PRK05469 271 VEEAELSYIIRDFDRE 286 (408)
T ss_pred cceEEEEEEEecCCHH
Confidence 7999999999998653
No 48
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=99.96 E-value=1.3e-27 Score=224.36 Aligned_cols=218 Identities=33% Similarity=0.401 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcccc------cEEEEEcCCCCCCCEEEeeccCCCCCCC-------------------
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVDHLG------NVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~~~~------nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------- 57 (286)
..|.++++|++++|+++|+.++.+..+ |+++++.+..+. |.|+|.||+||||++
T Consensus 31 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~-~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~l 109 (409)
T COG0624 31 GEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGG-PTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKL 109 (409)
T ss_pred ccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCC-CeEEEeccccccCCCCcccCccCCCccEEECCEE
Confidence 578999999999999999998766554 899999775432 899999999999986
Q ss_pred ---CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHH
Q 023187 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (286)
Q Consensus 58 ---g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~ 134 (286)
|..|||++++++++|++.|.+.+. .++++|.++|++|||+++ .|++.+....
T Consensus 110 yGRG~~D~KG~~~a~l~A~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~~~~~~~~~~------------------ 164 (409)
T COG0624 110 YGRGAADMKGGLAAALYALSALKAAGG--ELPGDVRLLFTADEESGG-----AGGKAYLEEG------------------ 164 (409)
T ss_pred EecCccccchHHHHHHHHHHHHHHhCC--CCCeEEEEEEEeccccCC-----cchHHHHHhc------------------
Confidence 567999999999999999999776 788999999999999843 3554432110
Q ss_pred HHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCC-CCCCCCCH-
Q 023187 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTV-PMSMRQDP- 212 (286)
Q Consensus 135 l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~-P~~~g~nA- 212 (286)
....++ .++.++++||. +...... .++.+++|..+++|+++|+++||+.. | +.|.|+
T Consensus 165 ~~~~~~-----------------~~d~~i~~E~~--~~~~~~~-~~~~~~kG~~~~~v~v~G~~~Has~~~p-~~~~n~i 223 (409)
T COG0624 165 EEALGI-----------------RPDYEIVGEPT--LESEGGD-IIVVGHKGSLWLEVTVKGKAGHASTTPP-DLGRNPI 223 (409)
T ss_pred chhhcc-----------------CCCEEEeCCCC--CcccCCC-eEEEcceeEEEEEEEEEeecccccccCC-cccccHH
Confidence 000111 22344888872 2112222 34458999999999999999996443 6 999994
Q ss_pred ---HHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCC-CeEEEEEEEeecCC-------ccceecCeEEEEEEEec
Q 023187 213 ---MTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSS-SLVCTVGEISSWPS-------ASNVIPGEIIVTGYIHC 281 (286)
Q Consensus 213 ---i~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~i~~g~~-------~~NvIP~~~~~~~diR~ 281 (286)
+..+++++..+.++.... .. +.+++++.+.+++. ..|+||++|++.+|+|+
T Consensus 224 ~~a~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~ 285 (409)
T COG0624 224 HAAIEALAELIEELGDLAGEG------------------FDGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRL 285 (409)
T ss_pred HHHHHHHHHHHHHhccccccc------------------ccCCccccccccccCCcccccCCccCceecceEEEEEEEec
Confidence 555555554444332221 12 45667776666633 36999999999999999
Q ss_pred CCCC
Q 023187 282 GFTS 285 (286)
Q Consensus 282 ~~~~ 285 (286)
.+..
T Consensus 286 ~p~~ 289 (409)
T COG0624 286 LPGE 289 (409)
T ss_pred CCcC
Confidence 8653
No 49
>PRK08201 hypothetical protein; Provisional
Probab=99.96 E-value=1.7e-27 Score=226.60 Aligned_cols=234 Identities=15% Similarity=0.107 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcc---cccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------------
Q 023187 3 PASVRAGNLIRQWMEDAGLR-TWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-v~~~~---~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------- 57 (286)
++|.++++||+++|+++|++ ++++. ..||++++.+. +..|+|+|+||+||||.+
T Consensus 37 ~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~-~~~~~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyG 115 (456)
T PRK08201 37 EDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHA-PGKPTVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYA 115 (456)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCC-CCCCEEEEEeccCCcCCCchhcccCCCCceEeECCEEEE
Confidence 36789999999999999996 55433 35799988653 346899999999999863
Q ss_pred -CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHH
Q 023187 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALR 136 (286)
Q Consensus 58 -g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~ 136 (286)
|+.|||++++++|++++.|.+.+. .++++|.|+|++|||.++ .|+..+... ..
T Consensus 116 RG~~DmKgglaa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~~-------------------~~ 169 (456)
T PRK08201 116 RGASDDKGQVFMHLKAVEALLKVEG--TLPVNVKFCIEGEEEIGS-----PNLDSFVEE-------------------EK 169 (456)
T ss_pred EecccCcHHHHHHHHHHHHHHHhcC--CCCCCEEEEEEcccccCC-----ccHHHHHHh-------------------hH
Confidence 678999999999999999987654 577899999999999842 355543210 00
Q ss_pred hCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCC--CCCCCCCCCCCCHHH
Q 023187 137 ENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQG--HAGTVPMSMRQDPMT 214 (286)
Q Consensus 137 ~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~--Hags~P~~~g~nAi~ 214 (286)
..+.+ + .+ +..|++.. .. ....++.++||..|++|+++|+++ || +.|...+.|||.
T Consensus 170 -~~~~~------------d--~~---ii~e~~~~-~~--~~~~i~~g~kG~~~~~l~v~G~~~~~Hs-~~~~~~~~nAi~ 227 (456)
T PRK08201 170 -DKLAA------------D--VV---LISDTTLL-GP--GKPAICYGLRGLAALEIDVRGAKGDLHS-GLYGGAVPNALH 227 (456)
T ss_pred -HhccC------------C--EE---EEeCCCcC-CC--CCEEEEEecCCeEEEEEEEEeCCCCCcc-ccccCcCCCHHH
Confidence 00111 1 11 33344321 10 112367889999999999999998 96 455145589999
Q ss_pred HHHHHHHHHHHHhcCCC--CCcc-----------------cCCC-CC-ccccccC------------CCCeEEEEEEEee
Q 023187 215 AAAELIVLLERLCKHPK--DFLS-----------------YDGR-SN-CSTLESL------------SSSLVCTVGEISS 261 (286)
Q Consensus 215 ~~a~~i~~l~~~~~~~~--~~~~-----------------~~~~-~~-~~~~~~~------------~~~~~~~~g~i~~ 261 (286)
.|+++|.+|+++..... .+.. ++.. .. ....+++ ...++++++.|+|
T Consensus 228 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~g 307 (456)
T PRK08201 228 ALVQLLASLHDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYG 307 (456)
T ss_pred HHHHHHHhcCCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeec
Confidence 99999999976321100 0000 0000 00 0000000 0135789999988
Q ss_pred cC---CccceecCeEEEEEEEecCCCC
Q 023187 262 WP---SASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 262 g~---~~~NvIP~~~~~~~diR~~~~~ 285 (286)
|. ++.|+||++|++.+|+|+.+..
T Consensus 308 g~~~~~~~NvVP~~a~~~~diR~~p~~ 334 (456)
T PRK08201 308 GFQGEGTKTVIPAEAHAKITCRLVPDQ 334 (456)
T ss_pred CCCCCCCceEECcceEEEEEEEeCCCC
Confidence 62 3479999999999999998654
No 50
>PRK08262 hypothetical protein; Provisional
Probab=99.96 E-value=2.1e-27 Score=227.65 Aligned_cols=236 Identities=19% Similarity=0.161 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHHcCCEEEEccc--ccEEEEEcCCCCCCCEEEeeccCCCCCCC------------------------CCC
Q 023187 7 RAGNLIRQWMEDAGLRTWVDHL--GNVHGRVEGLNASAQALLIGSHLDTVVDA------------------------GIF 60 (286)
Q Consensus 7 ~~~~~l~~~l~~~G~~v~~~~~--~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------------g~~ 60 (286)
++++||+++|+.+|++++.... .|+++.++|..++.++|+|.||+||||.+ |+.
T Consensus 74 ~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~ 153 (486)
T PRK08262 74 ALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGAL 153 (486)
T ss_pred HHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEecCcc
Confidence 5889999999999997664332 47888887754434899999999999863 567
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCC
Q 023187 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~ 140 (286)
|||++++++|.|++.|++.+. .++++|.|+|++|||.++ .|++.+.. .+...+.
T Consensus 154 D~Kg~~aa~L~A~~~l~~~~~--~l~~~I~llf~~dEE~g~-----~G~~~l~~-------------------~l~~~~~ 207 (486)
T PRK08262 154 DDKGSLVAILEAAEALLAQGF--QPRRTIYLAFGHDEEVGG-----LGARAIAE-------------------LLKERGV 207 (486)
T ss_pred ccchhHHHHHHHHHHHHHcCC--CCCCeEEEEEecccccCC-----cCHHHHHH-------------------HHHHhcC
Confidence 999999999999999999886 688999999999999743 38876542 2222233
Q ss_pred ChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 023187 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (286)
Q Consensus 141 ~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i 220 (286)
.++.. .+.+ .++..+..++. .++ ...+..+++|..+++|+++|+++| ++.| +. .|||..++++|
T Consensus 208 ~~~~~------~~~~---~~i~~~~~~~~-~~p---~~~i~~~~kG~~~~~i~v~G~~~H-ss~p-~~-~nai~~l~~~l 271 (486)
T PRK08262 208 RLAFV------LDEG---GAITEGVLPGV-KKP---VALIGVAEKGYATLELTARATGGH-SSMP-PR-QTAIGRLARAL 271 (486)
T ss_pred CEEEE------EeCC---ceecccccCCC-Cce---EEeeEEeeeeeEEEEEEEecCCCC-CCCC-CC-CCHHHHHHHHH
Confidence 22110 0000 00001100000 000 122446789999999999999999 5789 78 99999999999
Q ss_pred HHHHHHhcCCCC------C-------cccCCC---------CC-------ccccccCCCCeEEEEEEEeecCCccceecC
Q 023187 221 VLLERLCKHPKD------F-------LSYDGR---------SN-------CSTLESLSSSLVCTVGEISSWPSASNVIPG 271 (286)
Q Consensus 221 ~~l~~~~~~~~~------~-------~~~~~~---------~~-------~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~ 271 (286)
.+|++......- + ..++.. .. ..........++++++.|++| .+.|+||+
T Consensus 272 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG-~~~NvIP~ 350 (486)
T PRK08262 272 TRLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGS-PKDNVLPQ 350 (486)
T ss_pred HHHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecC-CccccCCC
Confidence 999874211000 0 000000 00 000000013578999999999 88999999
Q ss_pred eEEEEEEEecCCCC
Q 023187 272 EIIVTGYIHCGFTS 285 (286)
Q Consensus 272 ~~~~~~diR~~~~~ 285 (286)
+|++.+|+|+.+..
T Consensus 351 ~a~~~~diR~~p~~ 364 (486)
T PRK08262 351 RATATVNFRILPGD 364 (486)
T ss_pred ccEEEEEEEeCCCC
Confidence 99999999998654
No 51
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.96 E-value=3.4e-27 Score=220.33 Aligned_cols=213 Identities=21% Similarity=0.222 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcccc------------cEEEEEcCCCCCCCEEEeeccCCCCCCC-------------
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVDHLG------------NVHGRVEGLNASAQALLIGSHLDTVVDA------------- 57 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~~~~------------nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------- 57 (286)
++|.++++||+++|+++|++++++..+ |+++.. +. +.|+|+|.+|+||||.+
T Consensus 26 ~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~ill~~HlDtvp~~~~~~~~~Pf~~~~ 102 (394)
T PRK08651 26 ENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARR-GS--GNPHLHFNGHYDVVPPGEGWSVNVPFEPKV 102 (394)
T ss_pred cCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEe-CC--CCceEEEEeeeeeecCCCCccccCCCCcEE
Confidence 567899999999999999998765432 356654 32 23899999999999864
Q ss_pred --------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCC
Q 023187 58 --------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGV 129 (286)
Q Consensus 58 --------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~ 129 (286)
|..|||++++++|++++.|++. . +++|.|+|++|||+++ .|++.+...
T Consensus 103 ~~~~~~grG~~D~k~~~~~~l~a~~~l~~~----~-~~~v~~~~~~~EE~g~-----~G~~~~~~~-------------- 158 (394)
T PRK08651 103 KDGKVYGRGASDMKGGIAALLAAFERLDPA----G-DGNIELAIVPDEETGG-----TGTGYLVEE-------------- 158 (394)
T ss_pred ECCEEEecCccccchHHHHHHHHHHHHHhc----C-CCCEEEEEecCccccc-----hhHHHHHhc--------------
Confidence 4468999999999999999865 3 6899999999999742 488765321
Q ss_pred cHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCC
Q 023187 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMR 209 (286)
Q Consensus 130 ~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g 209 (286)
+.. +++ .+ +..++. +. ..++.+++|..+++|+++|+++| ++.| +.|
T Consensus 159 ---------~~~-----------~~d--~~---i~~~~~------~~-~~i~~~~~G~~~~~i~v~G~~~H-~~~p-~~g 204 (394)
T PRK08651 159 ---------GKV-----------TPD--YV---IVGEPS------GL-DNICIGHRGLVWGVVKVYGKQAH-ASTP-WLG 204 (394)
T ss_pred ---------cCC-----------CCC--EE---EEecCC------CC-CceEEecccEEEEEEEEEEeccc-cCCC-ccc
Confidence 110 011 11 222332 11 13567899999999999999999 5689 899
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEE--EeecCCccceecCeEEEEEEEecCCCC
Q 023187 210 QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE--ISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 210 ~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
.|||.++++++.+|++....... . .....+.....+.++|. |++| .+.|+||++|++.+|+|+.+.+
T Consensus 205 ~nAi~~~~~~i~~l~~~~~~~~~---~-----~~~~~~~~~~~~~~ig~~~i~gG-~~~nviP~~a~~~~diR~~~~~ 273 (394)
T PRK08651 205 INAFEAAAKIAERLKSSLSTIKS---K-----YEYDDERGAKPTVTLGGPTVEGG-TKTNIVPGYCAFSIDRRLIPEE 273 (394)
T ss_pred cCHHHHHHHHHHHHHHHHHhhhc---c-----ccccccccCCCceeecceeeeCC-CCCCccCCEEEEEEEeeeCCCC
Confidence 99999999999999876432110 0 00000112345788998 9988 9999999999999999998754
No 52
>PRK07907 hypothetical protein; Provisional
Probab=99.95 E-value=3.8e-27 Score=223.81 Aligned_cols=230 Identities=21% Similarity=0.171 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHHHHcCC-EEEE---cccccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------------
Q 023187 4 ASVRAGNLIRQWMEDAGL-RTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~-~v~~---~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------------- 57 (286)
+|.++++||.++|+++|+ ++++ +..+|++++++++ +..|+|+|+||+||||++
T Consensus 42 ~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~-~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGr 120 (449)
T PRK07907 42 EVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAP-PGAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGR 120 (449)
T ss_pred hHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCC-CCCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEEC
Confidence 478999999999999998 7775 3467899999764 236899999999999973
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHh
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 137 (286)
|+.|||++++++|+|++.| +. .++.+|.|++++|||.++ .|++.+...
T Consensus 121 G~~D~Kg~~aa~l~a~~~l---~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~~---------------------- 168 (449)
T PRK07907 121 GAADDKGGIAMHLAALRAL---GG--DLPVGVTVFVEGEEEMGS-----PSLERLLAE---------------------- 168 (449)
T ss_pred CccCCcHHHHHHHHHHHHh---cc--CCCCcEEEEEEcCcccCC-----ccHHHHHHh----------------------
Confidence 6789999999999999998 22 467899999999999842 376655321
Q ss_pred CCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEE--ecCCCCCCCCCCCCCCHHHH
Q 023187 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVR--GSQGHAGTVPMSMRQDPMTA 215 (286)
Q Consensus 138 ~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~--G~~~Hags~P~~~g~nAi~~ 215 (286)
.+- .++++ .+ +..|++... .+ ...++.++||..|++++++ |+++|| +.|...+.|||..
T Consensus 169 ~~~----------~~~~d--~~---iv~E~~~~~--~~-~p~i~~~~kG~~~~~l~v~~~G~~~Hs-s~~~~~~~nAi~~ 229 (449)
T PRK07907 169 HPD----------LLAAD--VI---VIADSGNWS--VG-VPALTTSLRGNADVVVTVRTLEHAVHS-GQFGGAAPDALTA 229 (449)
T ss_pred chH----------hhcCC--EE---EEecCCcCC--CC-CeEEEEecCCcEEEEEEEEECCCCCCC-ccccccCCCHHHH
Confidence 000 00111 11 333443210 01 1135678999999999999 899996 5532678999999
Q ss_pred HHHHHHHHHHHhcCCC--CCcccCCC-CCc----------------------cccccCCCCeEEEEEEEeec--CCccce
Q 023187 216 AAELIVLLERLCKHPK--DFLSYDGR-SNC----------------------STLESLSSSLVCTVGEISSW--PSASNV 268 (286)
Q Consensus 216 ~a~~i~~l~~~~~~~~--~~~~~~~~-~~~----------------------~~~~~~~~~~~~~~g~i~~g--~~~~Nv 268 (286)
++++|.+|++...... .+...... ... .........++++++.|+++ ..+.|+
T Consensus 230 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nv 309 (449)
T PRK07907 230 LVRLLATLHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNA 309 (449)
T ss_pred HHHHHHhhCCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCE
Confidence 9999999986422100 00000000 000 00000012467889989863 267899
Q ss_pred ecCeEEEEEEEecCCCC
Q 023187 269 IPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 269 IP~~~~~~~diR~~~~~ 285 (286)
||++|++++|+|+...+
T Consensus 310 IP~~a~~~~diR~~p~~ 326 (449)
T PRK07907 310 LPPSARARLSLRVAPGQ 326 (449)
T ss_pred ecCceEEEEEEEcCCCC
Confidence 99999999999998654
No 53
>PRK09104 hypothetical protein; Validated
Probab=99.95 E-value=3.7e-27 Score=224.73 Aligned_cols=232 Identities=15% Similarity=0.122 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcc---cccEEEEEcCCCCCCCEEEeeccCCCCCCC------------------------
Q 023187 5 SVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------------ 57 (286)
Q Consensus 5 E~~~~~~l~~~l~~~G~~v~~~~---~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------------ 57 (286)
+.++++||+++|+++|+++++.. ..||+++++|.++..|+|+|.||+||||.+
T Consensus 42 ~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~l 121 (464)
T PRK09104 42 CRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVI 121 (464)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceE
Confidence 57899999999999999987532 357999997654456999999999999852
Q ss_pred ---CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHH
Q 023187 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (286)
Q Consensus 58 ---g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~ 134 (286)
|+.|||++++++|+|++.|++.+. .++++|.|+|++|||.++ .|++.+.. +.
T Consensus 122 yGRG~~D~Kg~laa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~------------------~~ 176 (464)
T PRK09104 122 VARGASDDKGQLMTFVEACRAWKAVTG--SLPVRVTILFEGEEESGS-----PSLVPFLE------------------AN 176 (464)
T ss_pred EEecccCCcHHHHHHHHHHHHHHHhcC--CCCCcEEEEEECccccCC-----ccHHHHHH------------------hh
Confidence 336999999999999999998765 677899999999999842 35554321 00
Q ss_pred HHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEe--cCCCCCCCCCCCCCCH
Q 023187 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG--SQGHAGTVPMSMRQDP 212 (286)
Q Consensus 135 l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G--~~~Hags~P~~~g~nA 212 (286)
.. .+.+ +. + +..|++.. ......++.++||..|++|+++| +++||+..| +.|.||
T Consensus 177 ~~--~~~~------------d~--~---iv~E~~~~---~~~~~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~-~~g~na 233 (464)
T PRK09104 177 AE--ELKA------------DV--A---LVCDTGMW---DRETPAITTSLRGLVGEEVTITAADRDLHSGLFG-GAAANP 233 (464)
T ss_pred HH--hcCC------------CE--E---EEeCCCCC---CCCCeEEEeecCCeEEEEEEEEeCCCCccccccC-CccCCH
Confidence 00 0111 11 1 33344311 01122466789999999999999 789964457 899999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcccCC--------------C---CCcccc------ccC-----------CCCeEEEEEE
Q 023187 213 MTAAAELIVLLERLCKHPKDFLSYDG--------------R---SNCSTL------ESL-----------SSSLVCTVGE 258 (286)
Q Consensus 213 i~~~a~~i~~l~~~~~~~~~~~~~~~--------------~---~~~~~~------~~~-----------~~~~~~~~g~ 258 (286)
|..+++++.+|++...+. .+..++. . .....+ .+. ...++++++.
T Consensus 234 i~~~~~~l~~l~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~ 312 (464)
T PRK09104 234 IRVLTRILAGLHDETGRV-TLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEING 312 (464)
T ss_pred HHHHHHHHHhccCCCCCE-eCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEec
Confidence 999999999987632110 0000000 0 000000 000 0135789999
Q ss_pred EeecC---CccceecCeEEEEEEEecCCCC
Q 023187 259 ISSWP---SASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 259 i~~g~---~~~NvIP~~~~~~~diR~~~~~ 285 (286)
|++|. ++.|+||++|++++|+|++..+
T Consensus 313 i~gg~~~~~~~nvvP~~~~~~~diR~~p~~ 342 (464)
T PRK09104 313 IWGGYTGEGFKTVIPAEASAKVSFRLVGGQ 342 (464)
T ss_pred cccCCCCCCCccEecCceEEEEEEEeCCCC
Confidence 99882 2579999999999999998654
No 54
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.95 E-value=1.1e-26 Score=221.64 Aligned_cols=204 Identities=19% Similarity=0.265 Sum_probs=150.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCC--CCCCEEEeeccCCCCCCC----------------------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDA---------------------- 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~--~~~~~l~~~~H~DtV~~~---------------------- 57 (286)
|++|.++++||.++|+++|+++++|..+|++++++++. .+.|.|+|.||+||||++
T Consensus 26 S~~e~~~~~~l~~~~~~~G~~~~~d~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l 105 (485)
T PRK15026 26 SYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWV 105 (485)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEEecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEE
Confidence 67899999999999999999999999999999876431 235899999999999863
Q ss_pred ---CC---CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcH
Q 023187 58 ---GI---FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTV 131 (286)
Q Consensus 58 ---g~---~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~ 131 (286)
|. .|||+|++++|+++ ++.+. ++++|.++|++|||. |+.|++.+...
T Consensus 106 ~g~Gt~lgaD~k~gva~~l~~l---~~~~~---~~~~i~~l~t~dEE~-----G~~ga~~l~~~---------------- 158 (485)
T PRK15026 106 KARGTTLGADNGIGMASALAVL---ADENV---VHGPLEVLLTMTEEA-----GMDGAFGLQSN---------------- 158 (485)
T ss_pred EeCCccccCccHHHHHHHHHHH---HhCCC---CCCCEEEEEEccccc-----CcHhHHHhhhc----------------
Confidence 33 49999999887765 45554 478999999999998 34588765211
Q ss_pred HHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCccc----cc---CCcccceEece----ecceEEEEEEEe-cCC
Q 023187 132 LDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVL----EW---VGFPLGVVQGI----AGQTRLKVTVRG-SQG 199 (286)
Q Consensus 132 ~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~----~~---~~~~~~vv~~~----~G~~~~~i~v~G-~~~ 199 (286)
...+++ + +.+|+.... .- ........... +|..+++|+++| +++
T Consensus 159 -------~~~~~~--------------~---i~~e~~~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~gg 214 (485)
T PRK15026 159 -------WLQADI--------------L---INTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGG 214 (485)
T ss_pred -------cCCcCE--------------E---EEeCCCCCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCc
Confidence 001110 0 222332100 00 00000011122 688899999999 999
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEE
Q 023187 200 HAGTVPMSMRQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGY 278 (286)
Q Consensus 200 Hags~P~~~g~-nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~d 278 (286)
|||..| +.|+ |||..++++|.++.+ ..+++++.|+|| ++.|+||++|++.+|
T Consensus 215 HsG~~i-~~g~~nAi~~la~~l~~~~~-------------------------~~~~~v~~i~GG-~~~NaIp~~a~a~i~ 267 (485)
T PRK15026 215 HSGGEI-HVGLGNANKLLVRFLAGHAE-------------------------ELDLRLIDFNGG-TLRNAIPREAFATIA 267 (485)
T ss_pred CChHHH-CCCCccHHHHHHHHHHHhHh-------------------------hCCeEEEEEeCC-CccCCCCCCcEEEEE
Confidence 999899 9999 999999999987431 246789999999 999999999999999
Q ss_pred EecCC
Q 023187 279 IHCGF 283 (286)
Q Consensus 279 iR~~~ 283 (286)
+|..+
T Consensus 268 ~~~~~ 272 (485)
T PRK15026 268 VAADK 272 (485)
T ss_pred EChhH
Confidence 99754
No 55
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.95 E-value=3.8e-26 Score=206.11 Aligned_cols=221 Identities=22% Similarity=0.233 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHcCCEEEEcc----cccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------------CCC
Q 023187 7 RAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GIF 60 (286)
Q Consensus 7 ~~~~~l~~~l~~~G~~v~~~~----~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~----------------------g~~ 60 (286)
.+++|+.++.+++|+.++... ..+++.+|.|++++.++|+|+||+||||+- |+.
T Consensus 49 a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~e~W~h~Pfsa~~~~~g~IyaRGaq 128 (420)
T KOG2275|consen 49 ACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFREKWTHPPFSAFKDEDGNIYARGAQ 128 (420)
T ss_pred HHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCcccCccCCccccccCCCcEEecccc
Confidence 689999999999999875322 345889999999999999999999999963 788
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCC
Q 023187 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~ 140 (286)
|||+-+++.|+|++.|+..|. +++++|.+.|.+|||.++ ..|++.++... +..+.+
T Consensus 129 D~K~~~va~leAir~L~~~g~--kp~Rti~lsfvpDEEi~G----~~Gm~~fa~~~-----------------~~~~l~- 184 (420)
T KOG2275|consen 129 DMKCVGVAYLEAIRNLKASGF--KPKRTIHLSFVPDEEIGG----HIGMKEFAKTE-----------------EFKKLN- 184 (420)
T ss_pred chHhHHHHHHHHHHHHHhcCC--CcCceEEEEecCchhccC----cchHHHHhhhh-----------------hhcccc-
Confidence 999999999999999999999 899999999999999964 45877665310 001111
Q ss_pred ChhhHHhhhccCCCccccceEEeec-cCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHH
Q 023187 141 DIAEESLLQLKYDPASVWGYIEVHI-EQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAEL 219 (286)
Q Consensus 141 ~~d~~~~~~~~~~~~~i~~~~~lh~-e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~ 219 (286)
+ + +.+ |++.... ...-+..++||.+|++|++.|+++| ||.|+ -..|+.++.++
T Consensus 185 ----------------~-~---filDEG~~se~---d~~~vfyaEkg~w~~~v~~~G~~GH-ss~~~--~nTa~~~l~kl 238 (420)
T KOG2275|consen 185 ----------------L-G---FILDEGGATEN---DFATVFYAEKGPWWLKVTANGTPGH-SSYPP--PNTAIEKLEKL 238 (420)
T ss_pred ----------------e-e---EEecCCCCCcc---cceeEEEEeeceeEEEEEecCCCCC-CCCCC--CccHHHHHHHH
Confidence 0 1 111 3322111 1123456799999999999999999 68863 37899999999
Q ss_pred HHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 220 IVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 220 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
+.++++......++++ ..+. ......++++++.|+|| .+.|++|...++.+|+|....
T Consensus 239 v~~~~~fr~~q~~~l~---~~p~---~~~~~vtT~Nv~~i~GG-v~~N~~P~~~ea~~dirv~~~ 296 (420)
T KOG2275|consen 239 VESLEEFREKQVDLLA---SGPK---LALGDVTTINVGIINGG-VQSNVLPETFEAAFDIRVRPH 296 (420)
T ss_pred HHHHHHhHHHHHHHhh---cCCc---eeccceeEEeeeeeecc-cccCcCchhheeeeeeEeccC
Confidence 9999887633222111 0111 11346789999999999 999999999999999998643
No 56
>PRK07318 dipeptidase PepV; Reviewed
Probab=99.94 E-value=9.5e-26 Score=215.15 Aligned_cols=245 Identities=20% Similarity=0.129 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------CCCccH
Q 023187 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIFDGS 63 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------g~~D~k 63 (286)
.|.++++||+++|+++|++++.. .|+++++.... ..++|+|+||+||||.+ |+.|||
T Consensus 44 ~~~~~~~~l~~~~~~~G~~~~~~--~n~~~~~~~~~-~~~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmK 120 (466)
T PRK07318 44 GPVKALEKFLEIAERDGFKTKNV--DNYAGHIEYGE-GEEVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDK 120 (466)
T ss_pred cHHHHHHHHHHHHHHCCCEEEEe--cCccceEEECC-CCCEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCc
Confidence 47799999999999999998753 47776654322 34789999999999864 667999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChh
Q 023187 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (286)
Q Consensus 64 ~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d 143 (286)
+|++++++|++.|++.+. +++++|.|+|++|||.+ +.|++++........ .++.+|
T Consensus 121 gg~aa~l~Al~~l~~~g~--~~~~~i~l~~~~DEE~g-----~~G~~~l~~~~~~~~-----------------~~~~~d 176 (466)
T PRK07318 121 GPTMAAYYALKIIKELGL--PLSKKVRFIVGTDEESG-----WKCMDYYFEHEEAPD-----------------FGFSPD 176 (466)
T ss_pred HHHHHHHHHHHHHHHcCC--CCCccEEEEEEcccccC-----chhHHHHHHhCCCCC-----------------EEEEeC
Confidence 999999999999999887 77889999999999984 358887754321000 011111
Q ss_pred hH---HhhhccC---------CCccccceEEeeccCCcccccCCcc-cc------------------eEeceecce----
Q 023187 144 EE---SLLQLKY---------DPASVWGYIEVHIEQGPVLEWVGFP-LG------------------VVQGIAGQT---- 188 (286)
Q Consensus 144 ~~---~~~~~~~---------~~~~i~~~~~lh~e~g~~~~~~~~~-~~------------------vv~~~~G~~---- 188 (286)
.+ .+.++.. ......+.+ ...+++...+..... .. +..++||..
T Consensus 177 ~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~kG~~~~~~ 255 (466)
T PRK07318 177 AEFPIINGEKGITTFDLVHFEGENEGDYVL-VSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLAENGLKGELEEEG 255 (466)
T ss_pred CCCcEEEEEeeeEEEEEEeccccCCCCcee-EEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHhhcCceEEEEecC
Confidence 00 0000000 000000000 011111110000000 00 112567754
Q ss_pred -EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHH------Hhc---CCCCCcccCCCCCcc-ccccCCCCeEEEEE
Q 023187 189 -RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLER------LCK---HPKDFLSYDGRSNCS-TLESLSSSLVCTVG 257 (286)
Q Consensus 189 -~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~------~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g 257 (286)
|++|+++|+++| +|.| +.|.|||..|+++|..|+. +.. .... ..+++..... ..+...+..++++|
T Consensus 256 ~~~~i~v~G~aaH-~s~p-~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~t~nvg 332 (466)
T PRK07318 256 GKLVLTVIGKSAH-GSTP-EKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLH-EDTRGEKLGIAYEDDVMGDLTMNVG 332 (466)
T ss_pred CEEEEEEEeeEcc-cCCC-ccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcC-CCCCcccCCCcccCCCccCeEEEee
Confidence 899999999999 6899 9999999999999999864 100 0000 0000000000 00112245689999
Q ss_pred EEeecCCccceecCeEEEEEEEecCCCC
Q 023187 258 EISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 258 ~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
.|++|+. . +|++++|+|+.+.+
T Consensus 333 ~i~gg~~-~-----~~~~~iDiR~~p~~ 354 (466)
T PRK07318 333 VFSFDEE-K-----GGTLGLNFRYPVGT 354 (466)
T ss_pred EEEEecC-c-----EEEEEEEEeCCCCC
Confidence 9999832 1 89999999998654
No 57
>PRK07205 hypothetical protein; Provisional
Probab=99.94 E-value=2.8e-25 Score=210.75 Aligned_cols=239 Identities=17% Similarity=0.126 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHcCCEEEEccccc-EEEEEcCCCCCCCEEEeeccCCCCCCC----------------------CCCcc
Q 023187 6 VRAGNLIRQWMEDAGLRTWVDHLGN-VHGRVEGLNASAQALLIGSHLDTVVDA----------------------GIFDG 62 (286)
Q Consensus 6 ~~~~~~l~~~l~~~G~~v~~~~~~n-v~a~~~g~~~~~~~l~~~~H~DtV~~~----------------------g~~D~ 62 (286)
.++++|+.++|+++|++++++..++ +++++ |. +.+.|+|+||+||||++ |+.||
T Consensus 41 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~-g~--~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~Dm 117 (444)
T PRK07205 41 QDVLEATLDLCQGLGFKTYLDPKGYYGYAEI-GQ--GEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDD 117 (444)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCeEEEEEe-cC--CCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccC
Confidence 5688899999999999988765443 56665 43 35899999999999973 67899
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCCh
Q 023187 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDI 142 (286)
Q Consensus 63 k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~ 142 (286)
|++++++|.|++.|++.+. +++++|.|+|++|||+++ .|++.+...... .+.++.+
T Consensus 118 Kgglaa~l~Al~~l~~~~~--~~~~~i~l~~~~dEE~g~-----~g~~~~~~~~~~-----------------~~~~~~~ 173 (444)
T PRK07205 118 KGPSMAALYAVKALLDAGV--QFNKRIRFIFGTDEETLW-----RCMNRYNEVEEQ-----------------ATMGFAP 173 (444)
T ss_pred cHHHHHHHHHHHHHHHcCC--CCCCcEEEEEECCcccCc-----ccHHHHHhCCCC-----------------CCeeECC
Confidence 9999999999999999887 788999999999999842 477665431100 0011111
Q ss_pred hhHHhhhccCCCccccceEEeeccCCccc--ccC---CcccceE-------------eceecc----eEEEEEEEecCCC
Q 023187 143 AEESLLQLKYDPASVWGYIEVHIEQGPVL--EWV---GFPLGVV-------------QGIAGQ----TRLKVTVRGSQGH 200 (286)
Q Consensus 143 d~~~~~~~~~~~~~i~~~~~lh~e~g~~~--~~~---~~~~~vv-------------~~~~G~----~~~~i~v~G~~~H 200 (286)
|.. ....+..... .++.+..++.... ... +...... .+++|. .+.+|+++|+++|
T Consensus 174 ~~~--~~v~~~ekG~-~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~~~H 250 (444)
T PRK07205 174 DSS--FPLTYAEKGL-LQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGKSVH 250 (444)
T ss_pred CCC--CceEEEEece-EEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeEEcc
Confidence 100 0000000000 0111222221000 000 0000000 012332 3449999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHh------cCCCCCcccCCCCCc-cccccCCCCeEEEEEEEeecCCccceecCeE
Q 023187 201 AGTVPMSMRQDPMTAAAELIVLLERLC------KHPKDFLSYDGRSNC-STLESLSSSLVCTVGEISSWPSASNVIPGEI 273 (286)
Q Consensus 201 ags~P~~~g~nAi~~~a~~i~~l~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~ 273 (286)
+|.| +.|.|||..+++++.++++.. ..... ...+.... ...+.....+++|+|. .|+||++|
T Consensus 251 -ss~p-~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~t~nvg~-------~nvvP~~a 319 (444)
T PRK07205 251 -AKDA-PQGINAVIRLAKALVVLEPHPALDFLANVIGE--DATGLNIFGDIEDEPSGKLSFNIAG-------LTITKEKS 319 (444)
T ss_pred -cCCC-ccCcCHHHHHHHHHHhccHHHHHHHHHHhcCC--CCccccCCccccCCCcCCceEEeEE-------EEEECCEE
Confidence 6899 899999999999998886531 10000 00000000 0000111235566653 58999999
Q ss_pred EEEEEEecCCCC
Q 023187 274 IVTGYIHCGFTS 285 (286)
Q Consensus 274 ~~~~diR~~~~~ 285 (286)
++++|+|+.+.+
T Consensus 320 ~~~ld~R~~p~~ 331 (444)
T PRK07205 320 EIRIDIRIPVLA 331 (444)
T ss_pred EEEEEEeCCCCC
Confidence 999999998654
No 58
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=99.94 E-value=1.6e-24 Score=206.56 Aligned_cols=240 Identities=18% Similarity=0.122 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------CCCcc
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIFDG 62 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------g~~D~ 62 (286)
.++.++++|+.++|+++||+++.. .|+++.+.+. ++.++|+|.+|+||||++ |+.||
T Consensus 42 ~~~~~~~~~~~~~~~~~G~~~~~~--~~~~~~~~~~-~~~~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~ 118 (466)
T TIGR01886 42 PGPVDALTKFLSFAERDGFTTKNF--DNYAGHVEYG-AGDERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDD 118 (466)
T ss_pred hhHHHHHHHHHHHHHHCCCeEEEe--cCCceeEEec-CCCCEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCcccc
Confidence 467889999999999999998752 3444444332 235899999999999974 67899
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccc-cchhcccCCCCCcHHHHHHhCCCC
Q 023187 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP-VSALRVSDKSGVTVLDALRENSID 141 (286)
Q Consensus 63 k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~-~~~~~~~~~~g~~~~~~l~~~g~~ 141 (286)
|++++++|.|++.|++.++ +++++|.|+|++|||++ +.|++.+..... .+. .+.
T Consensus 119 Kg~~~a~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g-----~~g~~~~~~~~~~~d~------------------~~~ 173 (466)
T TIGR01886 119 KGPSLAAYYAMKILKELGL--PPSKKIRFVVGTNEETG-----WVDMDYYFKHEETPDF------------------GFS 173 (466)
T ss_pred chHHHHHHHHHHHHHHhCC--CCCCCEEEEEECccccC-----cccHHHHHhcCcCCCE------------------EEE
Confidence 9999999999999999987 78999999999999983 357776643211 000 000
Q ss_pred hhh---HHhhhccCCCccccceEEeecc-------------CCcccccCCcc-cceE---------------eceecce-
Q 023187 142 IAE---ESLLQLKYDPASVWGYIEVHIE-------------QGPVLEWVGFP-LGVV---------------QGIAGQT- 188 (286)
Q Consensus 142 ~d~---~~~~~~~~~~~~i~~~~~lh~e-------------~g~~~~~~~~~-~~vv---------------~~~~G~~- 188 (286)
+|. .++++ +.. ..+++... .|......... ..++ .+++|..
T Consensus 174 ~d~~~~~~~ge----~g~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~kg~~~ 247 (466)
T TIGR01886 174 PDAEFPIINGE----KGN--FTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAYESFLADKASLD 247 (466)
T ss_pred CCCCceeEEEe----cce--EEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHHHHHHhhccCce
Confidence 000 00000 000 01111110 00000000000 0011 1355544
Q ss_pred --------EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHH----------HHHhcCCCCCcccCCCCC-ccccccCC
Q 023187 189 --------RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL----------ERLCKHPKDFLSYDGRSN-CSTLESLS 249 (286)
Q Consensus 189 --------~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~ 249 (286)
|++|+++|+++| +|.| +.|+|||..|++++..+ +.+..... ..++++.. ....++..
T Consensus 248 ~~~~~~~~~~~i~v~G~~aH-~s~P-~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~ 323 (466)
T TIGR01886 248 GSFEINDESATIVLIGKGAH-GAAP-QVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEH--EDFYGEKLGIAFHDELM 323 (466)
T ss_pred EEEEEeCCEEEEEEEeeEcc-cCCC-CCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcC--CCCCcccCCCcccccCc
Confidence 899999999999 6899 99999999999988772 22211000 00111000 00112223
Q ss_pred CCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 250 SSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 250 ~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+.+++|+|.|++| .. | ++|++.+|+|+++.+
T Consensus 324 g~~S~nvgvI~gG-~~-~---~~~~l~iD~R~~Pge 354 (466)
T TIGR01886 324 GDLAMNAGMFDFD-HA-N---KESKLLLNFRYPQGT 354 (466)
T ss_pred CceEEEeEEEEEe-cC-C---ceEEEEEEEecCCCC
Confidence 5689999999999 44 4 899999999998764
No 59
>PRK07079 hypothetical protein; Provisional
Probab=99.94 E-value=4.5e-25 Score=210.69 Aligned_cols=231 Identities=15% Similarity=0.067 Sum_probs=151.7
Q ss_pred HHHHHHHHHH----HHHHHcCCEEEEcc------cccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------
Q 023187 4 ASVRAGNLIR----QWMEDAGLRTWVDH------LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------- 57 (286)
Q Consensus 4 ~E~~~~~~l~----~~l~~~G~~v~~~~------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------- 57 (286)
.+.++++|++ ++|+++|+++++.. ..||++++.+. ++.|+|+|+||+||||.+
T Consensus 38 ~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~-~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~ 116 (469)
T PRK07079 38 RAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIED-DALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEE 116 (469)
T ss_pred cHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCC-CCCCEEEEEcccCCCCCChHHhcccCCCCccccc
Confidence 4567777775 48999999987522 35799998553 235899999999999842
Q ss_pred -------CCCccHHHHHHHHHHHHHHHHc-CCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCC
Q 023187 58 -------GIFDGSLGIITAISALKVLKST-GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGV 129 (286)
Q Consensus 58 -------g~~D~k~gv~a~l~a~~~L~~~-~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~ 129 (286)
|+.|||++++++|+|++.|.+. +. .+.++|.|+|++|||+++ .|++.+....
T Consensus 117 dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~--~~~~~i~~~~~~dEE~g~-----~G~~~l~~~~------------- 176 (469)
T PRK07079 117 GDRWYGRGTADNKGQHTINLAALEQVLAARGG--RLGFNVKLLIEMGEEIGS-----PGLAEVCRQH------------- 176 (469)
T ss_pred CCEEEEEeccCCcHHHHHHHHHHHHHHHhcCC--CCCCCEEEEEECccccCC-----ccHHHHHHHh-------------
Confidence 6779999999999999998653 34 678899999999999843 4877653210
Q ss_pred cHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEec--CCCCCCCCCC
Q 023187 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS--QGHAGTVPMS 207 (286)
Q Consensus 130 ~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~--~~Hags~P~~ 207 (286)
...+.+| .+ +..|++.. .. ....++.++||..|++|+++|+ +.|| .+ +
T Consensus 177 -------~~~~~~d--------------~~---iv~e~~~~-~~--~~~~i~~g~kG~~~~~v~v~G~~~~~hs--~~-~ 226 (469)
T PRK07079 177 -------REALAAD--------------VL---IASDGPRL-SA--ERPTLFLGSRGAVNFRLRVNLRDGAHHS--GN-W 226 (469)
T ss_pred -------HHhcCCC--------------EE---EEeCCCcc-CC--CCeEEEEecceEEEEEEEEeeCCCCCCC--Cc-c
Confidence 0011111 11 33344321 11 1123678899999999999998 4463 34 4
Q ss_pred CC--CCHHHHHHHHHHHHHHHhcCCC--CC------------c-c--cCCCCC---------cccc---ccCCCCeEEEE
Q 023187 208 MR--QDPMTAAAELIVLLERLCKHPK--DF------------L-S--YDGRSN---------CSTL---ESLSSSLVCTV 256 (286)
Q Consensus 208 ~g--~nAi~~~a~~i~~l~~~~~~~~--~~------------~-~--~~~~~~---------~~~~---~~~~~~~~~~~ 256 (286)
.| .||+..++.+|.++.+...... .| + . .+.... ...+ .+....+++|+
T Consensus 227 ~g~~~nai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv 306 (469)
T PRK07079 227 GGLLRNPGTVLAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEV 306 (469)
T ss_pred ccccCCHHHHHHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEE
Confidence 55 7999999999998854211100 00 0 0 000000 0000 00112357899
Q ss_pred EEEeecC--CccceecCeEEEEEEEecCCCC
Q 023187 257 GEISSWP--SASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 257 g~i~~g~--~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+.|++|. .+.|+||++|++++|+|+.+..
T Consensus 307 ~~i~gG~~~~~~NvVP~~a~~~vdiR~~P~~ 337 (469)
T PRK07079 307 LAFKTGNPDAPVNAIPGSARAVCQLRFVVGT 337 (469)
T ss_pred EeeecCCCCCcceEecCceEEEEEEEcCCCC
Confidence 9999983 2589999999999999998654
No 60
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=99.93 E-value=2.9e-24 Score=203.63 Aligned_cols=241 Identities=20% Similarity=0.137 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------CCCccH
Q 023187 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIFDGS 63 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------g~~D~k 63 (286)
++.++++||+++|+++|++++. .+|+.+..... +..|+|+|+||+||||.+ |+.|||
T Consensus 32 ~~~~~~~~l~~~~~~~g~~~~~--~~~~~~~~~~~-~~~~~l~l~gH~D~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~K 108 (447)
T TIGR01887 32 GPKKALDKFLELAKRDGFTTEN--VDNYAGYAEYG-QGEEYLGILGHLDVVPAGDGWTSPPFEAEIKDGRIYGRGTLDDK 108 (447)
T ss_pred hHHHHHHHHHHHHHHcCceEEE--ecCceEEEEeC-CCCCeEEEEeecCCCCCCCCCcCCCCceEEECCEEEECCcccCc
Confidence 4689999999999999999873 45655443221 134799999999999863 677999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChh
Q 023187 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (286)
Q Consensus 64 ~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d 143 (286)
+++++++.|++.|++.+. +++++|.|+|++|||.+ +.|++.+....... ..++.+|
T Consensus 109 G~laa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g-----~~g~~~~l~~~~~~-----------------~~~~~~d 164 (447)
T TIGR01887 109 GPTIAALYAMKILKELGL--KLKKKIRFIFGTDEETG-----WACIDYYFEHEEAP-----------------DIGFTPD 164 (447)
T ss_pred HHHHHHHHHHHHHHHcCC--CCCCcEEEEEECCcccC-----cHhHHHHHHhcCCC-----------------CEEEeCC
Confidence 999999999999999887 78899999999999983 35777654321000 0011111
Q ss_pred h---HHhhhccCCCccccceEEeeccCCcc----------cccCCccc---ceEecee-------------------cce
Q 023187 144 E---ESLLQLKYDPASVWGYIEVHIEQGPV----------LEWVGFPL---GVVQGIA-------------------GQT 188 (286)
Q Consensus 144 ~---~~~~~~~~~~~~i~~~~~lh~e~g~~----------~~~~~~~~---~vv~~~~-------------------G~~ 188 (286)
. ..+++ +. ..++++.+..+.. .++++... ..+.+++ |..
T Consensus 165 ~~~~~~~~e----~g--~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (447)
T TIGR01887 165 AEFPIIYGE----KG--IVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGSF 238 (447)
T ss_pred CCcceEEEe----cC--eEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceEE
Confidence 0 00000 00 0122222110000 01111111 0223344 666
Q ss_pred -----EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH--HHhcCCCC-----Cc-ccCCCCC-ccccccCCCCeEE
Q 023187 189 -----RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE--RLCKHPKD-----FL-SYDGRSN-CSTLESLSSSLVC 254 (286)
Q Consensus 189 -----~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~--~~~~~~~~-----~~-~~~~~~~-~~~~~~~~~~~~~ 254 (286)
|++|+++|+++| +|.| ++|.|||..+++++.+++ +....... +. ..++... ....++..+.+++
T Consensus 239 ~~~~~~~~i~v~G~~aH-ss~p-~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~ 316 (447)
T TIGR01887 239 EVNDGTATITLEGKSAH-GSAP-EKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTM 316 (447)
T ss_pred EecCCEEEEEEEeeecc-cCCC-ccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEE
Confidence 899999999999 6899 999999999999999986 22110000 00 0000000 0000111245789
Q ss_pred EEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 255 TVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 255 ~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
|+|.|++| +|++|++++|+|+...+
T Consensus 317 nvg~I~~g------~p~~~~~~~d~R~~p~~ 341 (447)
T TIGR01887 317 NVGVIDYE------NAEAGLIGLNVRYPVGN 341 (447)
T ss_pred EEEEEEEe------CCcEEEEEEEEecCCCC
Confidence 99999987 39999999999998654
No 61
>PRK06156 hypothetical protein; Provisional
Probab=99.89 E-value=8.5e-22 Score=190.22 Aligned_cols=98 Identities=24% Similarity=0.258 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccE-E-EEEcCCCCCCCEEEeeccCCCCCCC--------------------------
Q 023187 6 VRAGNLIRQWMEDAGLRTWVDHLGNV-H-GRVEGLNASAQALLIGSHLDTVVDA-------------------------- 57 (286)
Q Consensus 6 ~~~~~~l~~~l~~~G~~v~~~~~~nv-~-a~~~g~~~~~~~l~~~~H~DtV~~~-------------------------- 57 (286)
.++++||.++|+++|++++. .+|+ + ++++|. +.|.|+|+||+||||++
T Consensus 75 ~~~~~~l~~~l~~~G~~~~~--~~~~v~~~~~~g~--~~~~l~l~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGR 150 (520)
T PRK06156 75 IGFKKLLKSLARDFGLDYRN--VDNRVLEIGLGGS--GSDKVGILTHADVVPANPELWVLDGTRLDPFKVTLVGDRLYGR 150 (520)
T ss_pred HHHHHHHHHHHHHCCCeEEe--cCCeEEEEEecCC--CCCeEEEEEecCccCCCCccCccCCccCCCCceEEECCEEEEc
Confidence 35679999999999999864 4674 4 677653 34899999999999852
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhc
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (286)
|+.|||+++++++++++.|.+.+. +++++|.|+|++|||.+ +.|++.+..
T Consensus 151 G~~D~Kgg~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g-----~~G~~~~~~ 200 (520)
T PRK06156 151 GTEDDKGAIVTALYAMKAIKDSGL--PLARRIELLVYTTEETD-----GDPLKYYLE 200 (520)
T ss_pred CcccchHHHHHHHHHHHHHHHcCC--CCCceEEEEEecccccC-----chhHHHHHH
Confidence 557999999999999999999887 77899999999999984 348877653
No 62
>PRK08554 peptidase; Reviewed
Probab=99.83 E-value=2.4e-19 Score=169.68 Aligned_cols=89 Identities=26% Similarity=0.240 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHcCCEEEEc---ccccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------------CCC
Q 023187 5 SVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------GIF 60 (286)
Q Consensus 5 E~~~~~~l~~~l~~~G~~v~~~---~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------------g~~ 60 (286)
|.++++|++++|+++|++++.. ...|+++.+ +. ..+.|+|.||+||||.+ |+.
T Consensus 26 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~-~~--~~~~l~l~gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~~ 102 (438)
T PRK08554 26 SKECPKFIKDTLESWGIESELIEKDGYYAVYGEI-GE--GKPKLLFMAHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGSA 102 (438)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEe-CC--CCCEEEEEeccccCCCCccccccCCceeEEECCEEEECCcc
Confidence 6899999999999999998643 235788887 32 24789999999999974 567
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCc
Q 023187 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~ 100 (286)
|||++++++|+|++.|++. .++++|.|+|++|||.+
T Consensus 103 DmKgg~aa~l~A~~~l~~~----~~~~~i~l~~~~dEE~g 138 (438)
T PRK08554 103 DDKGNVASVMLALKELSKE----PLNGKVIFAFTGDEEIG 138 (438)
T ss_pred cchHHHHHHHHHHHHHHhc----CCCCCEEEEEEcccccC
Confidence 9999999999999999874 46789999999999984
No 63
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.61 E-value=6.4e-15 Score=133.53 Aligned_cols=103 Identities=26% Similarity=0.331 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc--------------------cccEEEEEcCCCCCCCEEEeeccCCCCCC-----
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH--------------------LGNVHGRVEGLNASAQALLIGSHLDTVVD----- 56 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~--------------------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~----- 56 (286)
|+.|.++++||+++|+++|++++... ..||++.++|.. .+.|++.+|+|||++
T Consensus 51 S~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~--~~~Ill~AH~DTV~p~~~~~ 128 (346)
T PRK10199 51 SPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKA--PQQIIIMAHLDTYAPQSDAD 128 (346)
T ss_pred CHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCC--CCeEEEEEEcCcCCCCCCCc
Confidence 67899999999999999999875311 136999998853 478999999999963
Q ss_pred ----------CCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcc
Q 023187 57 ----------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (286)
Q Consensus 57 ----------~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~ 115 (286)
-|+.||++|++++|++++.|++. +++.+|.|+++++||. |+.||++++..
T Consensus 129 ~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~----~~~~~I~fv~~~~EE~-----Gl~GS~~~~~~ 188 (346)
T PRK10199 129 VDANLGGLTLQGMDDNAAGLGVMLELAERLKNV----PTEYGIRFVATSGEEE-----GKLGAENLLKR 188 (346)
T ss_pred cccCCCCcccCCccccHHHHHHHHHHHHHHhhC----CCCCcEEEEEECCccc-----CcHHHHHHHHh
Confidence 17899999999999999999865 4677999999999998 46799988643
No 64
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.59 E-value=6.5e-15 Score=113.03 Aligned_cols=90 Identities=27% Similarity=0.296 Sum_probs=74.3
Q ss_pred eceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEee
Q 023187 182 QGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISS 261 (286)
Q Consensus 182 ~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~ 261 (286)
++++|..+++|+++|+++|+ +.| +.|+|||..+++++..|+++..+... . ......+..+++++.|++
T Consensus 1 ~g~~G~~~~~i~~~G~~~H~-s~~-~~g~nai~~~~~~l~~l~~~~~~~~~---------~-~~~~~~~~~~~~~~~i~g 68 (111)
T PF07687_consen 1 IGHRGVIWFRITITGKSGHS-SRP-EKGVNAIEAAARFLNALEELEFEWAF---------R-PEEFFPGPPTLNIGSIEG 68 (111)
T ss_dssp EEEEEEEEEEEEEESBSEET-TSG-GGSBCHHHHHHHHHHHHHHTTCHBTS---------T-HHHCTCTSEEEEEEEEEE
T ss_pred CcCCCEEEEEEEEEeeccCC-CCc-cCccCHHHHHHHHHHHHHHhhccccc---------c-cccccccccceeEeeccc
Confidence 36899999999999999995 699 99999999999999999987543110 0 000123678999999999
Q ss_pred cCCccceecCeEEEEEEEecCCC
Q 023187 262 WPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 262 g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
| .+.|+||++|++++|+|+++.
T Consensus 69 G-~~~n~ip~~a~~~~~~R~~p~ 90 (111)
T PF07687_consen 69 G-TAPNVIPDEATLTVDIRYPPG 90 (111)
T ss_dssp E-SSTTEESSEEEEEEEEEESTC
T ss_pred C-CcCCEECCEEEEEEEEECCCc
Confidence 9 899999999999999998764
No 65
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.37 E-value=1.2e-11 Score=112.89 Aligned_cols=181 Identities=18% Similarity=0.166 Sum_probs=125.1
Q ss_pred CHHHHHHHHHHHHHHHHcCC-E-----EE-----Ec--ccccEEEEEcCCCCCCCEEEeeccCCCCCCC-----------
Q 023187 2 SPASVRAGNLIRQWMEDAGL-R-----TW-----VD--HLGNVHGRVEGLNASAQALLIGSHLDTVVDA----------- 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~-~-----v~-----~~--~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~----------- 57 (286)
|..|...+++|...|+++-+ . +. -| ...||+|-++|+. ...+|++.||+|||...
T Consensus 26 T~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~-~k~tvvl~gH~DtV~iedYg~lKd~Afd 104 (553)
T COG4187 26 TPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGT-SKRTVVLHGHFDTVSIEDYGELKDLAFD 104 (553)
T ss_pred CcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCC-CCceEEEeeccceeecccccchhhhccC
Confidence 44688889999999887642 1 11 13 2468999998843 45899999999999653
Q ss_pred --------------------------------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCC
Q 023187 58 --------------------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQST 105 (286)
Q Consensus 58 --------------------------------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~ 105 (286)
|..|||+|+|+.|+.++.+.+.. ...|||.|+.+||||...
T Consensus 105 p~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~~---~~~GNlLf~a~pdEE~~s---- 177 (553)
T COG4187 105 PLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAART---DRQGNLLFMAVPDEEVES---- 177 (553)
T ss_pred HHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhCC---CCCCcEEEEeccchhhhc----
Confidence 67799999999999999998875 588999999999999843
Q ss_pred CcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEecee
Q 023187 106 FLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIA 185 (286)
Q Consensus 106 ~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~ 185 (286)
.|++.....+ ...-++.++. +.+. +..+......+....--+.+|..
T Consensus 178 -~G~r~a~~~L---------------~~L~kk~~l~---------------~~~~--IN~D~~~~~~dGd~~ryvYtGti 224 (553)
T COG4187 178 -RGMREARPAL---------------PGLKKKFDLE---------------YTAA--INLDVTSDQGDGDQGRYVYTGTI 224 (553)
T ss_pred -ccHHHHHHHH---------------HHHHHhhCce---------------EEEE--eccccccCCCCCccceEEEeccc
Confidence 3766443211 1111122221 1111 22221111111122234567888
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 023187 186 GQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLER 225 (286)
Q Consensus 186 G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~ 225 (286)
|-.---+-|.|+..|+ +.| ..|+||-..++.++.+|+.
T Consensus 225 GKLLp~f~vvG~etHv-G~~-f~Gvnan~maSei~~~le~ 262 (553)
T COG4187 225 GKLLPFFFVVGCETHV-GYP-FEGVNANFMASEITRRLEL 262 (553)
T ss_pred hhhcceeEEEeecccc-CCc-ccCCCHHHHHHHHHHHhhc
Confidence 8888888899999995 799 7999999999999998874
No 66
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.35 E-value=3.6e-11 Score=108.82 Aligned_cols=175 Identities=22% Similarity=0.252 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEccc------cc--------EEEEEcCCCCCCCEEEeeccCCCCCCC------------
Q 023187 4 ASVRAGNLIRQWMEDAGLRTWVDHL------GN--------VHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~v~~~~~------~n--------v~a~~~g~~~~~~~l~~~~H~DtV~~~------------ 57 (286)
+=+++++|++++|+++|-+++.-.. .+ +++++ |+++..+++++.||+|++|.+
T Consensus 40 ~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~~~-Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~L 118 (473)
T KOG2276|consen 40 EVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLGVL-GSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTL 118 (473)
T ss_pred HHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhhcc-cCCCCcceEEEEeeeeeeecCCCCCCcCCCeEE
Confidence 3468999999999999977664221 12 34444 777778999999999999975
Q ss_pred ----------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCC
Q 023187 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (286)
Q Consensus 58 ----------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~ 127 (286)
|+.|+|+-+++.+.+++++.+.+. .+.-||.|+|..-||. ||..+.+-
T Consensus 119 t~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~--~lpvnv~f~~EgmEEs--------gS~~L~~l------------ 176 (473)
T KOG2276|consen 119 TEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGI--DLPVNVVFVFEGMEES--------GSEGLDEL------------ 176 (473)
T ss_pred EEECCEEeccCcCCCCccchHHHHHHHHHHHhCc--cccceEEEEEEechhc--------cCccHHHH------------
Confidence 678999999999999999999998 8999999999999998 54433210
Q ss_pred CCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEe--cCCCCCCCC
Q 023187 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG--SQGHAGTVP 205 (286)
Q Consensus 128 g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G--~~~Hags~P 205 (286)
+. ..+..|. ..++. +.+.+.+-++. ....+-.|.+|...+.|+|+| +-.|||..-
T Consensus 177 ---~~--~~kD~~~-------------~~vD~---vciSdnyWlg~--kkPcltyGlRG~~yf~i~v~g~~~DlHSGvfG 233 (473)
T KOG2276|consen 177 ---IE--KEKDKFF-------------KDVDF---VCISDNYWLGT--KKPCLTYGLRGVIYFQIEVEGPSKDLHSGVFG 233 (473)
T ss_pred ---HH--HHhhhhh-------------ccCCE---EEeeCceeccC--CCcccccccccceeEEEEEeeccccccccccc
Confidence 00 0111111 01111 22233333332 223444688999999999999 888987432
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q 023187 206 MSMRQDPMTAAAELIVLLER 225 (286)
Q Consensus 206 ~~~g~nAi~~~a~~i~~l~~ 225 (286)
-.-.-|+..+..++..|.+
T Consensus 234 -G~~hE~m~dL~~~ms~Lv~ 252 (473)
T KOG2276|consen 234 -GVVHEAMNDLVLVMSSLVD 252 (473)
T ss_pred -chhHHHHHHHHHHHHHhcC
Confidence 2223566666666655554
No 67
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.32 E-value=1.3e-12 Score=121.33 Aligned_cols=205 Identities=20% Similarity=0.111 Sum_probs=148.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEccccc-------------EEEEEcCCCCCCCEEEeeccCCCCCC------------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGN-------------VHGRVEGLNASAQALLIGSHLDTVVD------------ 56 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~n-------------v~a~~~g~~~~~~~l~~~~H~DtV~~------------ 56 (286)
|++|.+++.++.+|++.+|+.++ |+.+| +.+++++....-|.+-+.+|+||+|.
T Consensus 21 S~~e~~~~p~~~~~~k~~~~~v~-dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~ 99 (414)
T COG2195 21 SKHEKAVAPSTVGQAKLLGLLVE-DELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILK 99 (414)
T ss_pred CCCccccccccHHHHHHcCchhh-hhhccccccccccCCCCeeeEEeeccccccccccccccccccccccccccCCceee
Confidence 67899999999999999999985 44332 45556665334577888899999852
Q ss_pred ---C---------------------------------C----CCccHHHHHHHHHHHHHHHHc--CCCCCCCcCEEEEEe
Q 023187 57 ---A---------------------------------G----IFDGSLGIITAISALKVLKST--GKLGKLKRPVEVIAF 94 (286)
Q Consensus 57 ---~---------------------------------g----~~D~k~gv~a~l~a~~~L~~~--~~~~~~~~~i~li~~ 94 (286)
| | +.|.|+|++.++.++..+.+. .+ ++++|++.|+
T Consensus 100 ~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~~i---~h~~i~~g~s 176 (414)
T COG2195 100 ATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHPEI---PHGGIRGGFS 176 (414)
T ss_pred eccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCccc---cccCeEEEec
Confidence 1 1 247899999999999999966 43 7899999999
Q ss_pred cCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccC
Q 023187 95 SDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWV 174 (286)
Q Consensus 95 ~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~ 174 (286)
++||.+ +.|+..+. +...+.+..| .+..+
T Consensus 177 ~~Ee~g-----~rg~~~~~-----------------~a~f~a~~ay-----------------------~iDGg------ 205 (414)
T COG2195 177 PDEEIG-----GRGAANKD-----------------VARFLADFAY-----------------------TLDGG------ 205 (414)
T ss_pred chHHhh-----hhhhhhcc-----------------HHhhhcceeE-----------------------ecCCC------
Confidence 999984 34776541 1111111111 11111
Q ss_pred CcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEE
Q 023187 175 GFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVC 254 (286)
Q Consensus 175 ~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (286)
....+.....+...+++++.|+..|+++.+ ....||+..+.+++..+.... .+..++.
T Consensus 206 -~~g~i~~ea~~~~~~~~~~~g~~~h~~~a~-~~~i~a~~~a~e~~~~~~~~~--------------------~~e~t~~ 263 (414)
T COG2195 206 -PVGEIPREAFNAAAVRATIVGPNVHPGSAK-GKMINALLLAAEFILELPLEE--------------------VPELTEG 263 (414)
T ss_pred -ccCeeeeeccchheeeeeeeccCcCccchH-HHHhhHHHhhhhhhhcCCccc--------------------ccccccc
Confidence 112233445678889999999999998888 889999998888876554211 2235677
Q ss_pred EEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 255 TVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 255 ~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
+.|+.+.+ +..|.|.+++.+..++|..+.
T Consensus 264 ~~Gv~~~~-~~~~~V~~~s~~~~~iR~~d~ 292 (414)
T COG2195 264 PEGVYHLG-DSTNSVEETSLNLAIIRDFDN 292 (414)
T ss_pred cceEEecc-ccccchhhhhhhhhhhhhcch
Confidence 89999998 999999999999999998765
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.27 E-value=3.4e-11 Score=110.36 Aligned_cols=97 Identities=20% Similarity=0.216 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCC--------C---------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD--------A--------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~--------~--------------- 57 (286)
.|+.|.+++++|.++|+++|+++++|..+|++++++|.. +.|.|+|.+|||+|.- |
T Consensus 18 ~SG~E~~V~~~l~~~l~~~g~ev~~D~~Gnlia~~~g~~-~~~~v~l~aHmDevG~~V~~I~~~G~l~~~~iGG~~~~~l 96 (343)
T TIGR03106 18 PTGFTDAVVRYVAERLEDLGIEYELTRRGAIRATLPGRE-ATPARAVVTHLDTLGAMVRELKDNGRLELVPIGHWSARFA 96 (343)
T ss_pred CCCCHHHHHHHHHHHHHHcCCeEEECCCeEEEEEECCCC-CCCeEEEEEeeccccceeeEECCCCeEEEEecCCCcccce
Confidence 378999999999999999999999999999999987742 3479999999999752 1
Q ss_pred -------------------C------------------------------------------------------------
Q 023187 58 -------------------G------------------------------------------------------------ 58 (286)
Q Consensus 58 -------------------g------------------------------------------------------------ 58 (286)
|
T Consensus 97 ~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd~v~~~~~~~~~~~~~ 176 (343)
T TIGR03106 97 EGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGDFVAFDPQPEFLANGF 176 (343)
T ss_pred eCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCCEEEECCccEEecCCE
Confidence 0
Q ss_pred ----CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCc
Q 023187 59 ----IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (286)
Q Consensus 59 ----~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~ 100 (286)
+.|||+|+++++++++.|++.+. +++.+|.++|+++||.+
T Consensus 177 i~gr~~D~K~G~a~~l~~~~~l~~~~~--~~~~~v~~~~t~qEEvG 220 (343)
T TIGR03106 177 IVSRHLDDKAGVAALLAALKAIVEHKV--PLPVDVHPLFTITEEVG 220 (343)
T ss_pred EEEEecccHHhHHHHHHHHHHHHhcCC--CCCceEEEEEECCcccC
Confidence 14889999999999999998765 67899999999999985
No 69
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.18 E-value=1.3e-10 Score=106.55 Aligned_cols=110 Identities=21% Similarity=0.228 Sum_probs=89.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCC--------C---------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD--------A--------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~--------~--------------- 57 (286)
.|+.|.+++++++++|++++.++++|..||+++.++|.....|.|++.+|||+|+- |
T Consensus 13 pSG~E~~v~~~i~~~l~~~~~~v~~D~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~~~~vGG~~~~~l 92 (350)
T TIGR03107 13 TSGFEHPIRDYLRQDITPLVDQVETDGLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFRVVELGGWNPLVV 92 (350)
T ss_pred CCCCcHHHHHHHHHHHHhhCCEEEECCCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEEEEeCCCcccccc
Confidence 48899999999999999999999999999999998763123479999999999852 1
Q ss_pred -----------C--------------------------------------------------------------------
Q 023187 58 -----------G-------------------------------------------------------------------- 58 (286)
Q Consensus 58 -----------g-------------------------------------------------------------------- 58 (286)
|
T Consensus 93 ~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~~~~~~~~~~~~i 172 (350)
T TIGR03107 93 SSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQTETILTANGKNV 172 (350)
T ss_pred CCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEECCCeEEEcCCCEE
Confidence 0
Q ss_pred ---CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccc
Q 023187 59 ---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVS 119 (286)
Q Consensus 59 ---~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~ 119 (286)
+.|++.|+++++++++.|++. +++.+|+++|++.||. |+.||+..+..+++|
T Consensus 173 ~~kalDdR~g~a~l~e~l~~l~~~----~~~~~l~~~~tvqEEv-----G~rGA~~aa~~i~pD 227 (350)
T TIGR03107 173 ISKAWDNRYGVLMILELLESLKDQ----ELPNTLIAGANVQEEV-----GLRGAHVSTTKFNPD 227 (350)
T ss_pred EEeccccHHHHHHHHHHHHHhhhc----CCCceEEEEEEChhhc-----CchhhhhHHhhCCCC
Confidence 247899999999999999876 4678999999999998 456988765544443
No 70
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.17 E-value=1.4e-10 Score=105.62 Aligned_cols=109 Identities=25% Similarity=0.311 Sum_probs=91.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCC--------C---------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD--------A--------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~--------~--------------- 57 (286)
.|+.|.+++++++++|+.++.++++|+.||++++++|.+ +.+.+++.+|||.|-. |
T Consensus 17 psG~E~eVr~~~~~el~~~~~ev~~D~lGnlia~~~g~~-g~~~imi~AHmDEiG~mV~~I~~~G~Lr~~~IGG~~~~~~ 95 (355)
T COG1363 17 PSGYEEEVRDVLKEELEPLGDEVEVDRLGNLIAKKGGKN-GPPKVMIAAHMDEIGFMVKEIEDDGFLRFVPIGGWDPQVL 95 (355)
T ss_pred CCCcHHHHHHHHHHHHHHhCCceEEcCCCcEEEEecCCC-CCccEEEEeecceeeeeEEEECCCceEEEEEcCCcChhhc
Confidence 488999999999999999999999999999999998832 3356999999999732 1
Q ss_pred ---------------------------------------------------------C----------------------
Q 023187 58 ---------------------------------------------------------G---------------------- 58 (286)
Q Consensus 58 ---------------------------------------------------------g---------------------- 58 (286)
|
T Consensus 96 ~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v~~~~~~~~l~~~~i~ 175 (355)
T COG1363 96 EGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFVVFDPRFRELANGRVV 175 (355)
T ss_pred cCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEEEEcCceEEecCCcEE
Confidence 0
Q ss_pred --CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccc
Q 023187 59 --IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVS 119 (286)
Q Consensus 59 --~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~ 119 (286)
.+|++.|++++|++++.| + +. .+..+++|+|++.||. |+.||+..+..+++|
T Consensus 176 skalDdR~gva~lle~lk~l-~-~~--~~~~~vy~v~tvqEEV-----GlrGA~~~a~~i~pd 229 (355)
T COG1363 176 SKALDDRAGVAALLELLKEL-K-GI--ELPADVYFVASVQEEV-----GLRGAKTSAFRIKPD 229 (355)
T ss_pred eeeccchHhHHHHHHHHHHh-c-cC--CCCceEEEEEecchhh-----ccchhhccccccCCC
Confidence 258899999999999999 4 44 6889999999999998 467998887766665
No 71
>PRK09961 exoaminopeptidase; Provisional
Probab=99.17 E-value=2e-10 Score=105.55 Aligned_cols=107 Identities=21% Similarity=0.263 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCC--------C---------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD--------A--------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~--------~--------------- 57 (286)
.|+.|.+++++++++|+++|.++++|..||+++++.|. ..|.|+|.+|||+|+- |
T Consensus 15 ~sG~E~~v~~~i~~~l~~~~~~v~~D~~Gnvi~~~~g~--~~~~v~l~aHmDevg~~V~~I~~~G~l~~~~vGG~~~~~~ 92 (344)
T PRK09961 15 IASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAAR 92 (344)
T ss_pred CCCChHHHHHHHHHHHHhhCCEEEECCCCCEEEEEcCC--CCCEEEEEeccceeceEEEEECCCceEEEEeCCCcccccc
Confidence 47899999999999999999999999999999988663 3479999999999863 1
Q ss_pred -----------C-----------------------------------------------------------CCccHHHHH
Q 023187 58 -----------G-----------------------------------------------------------IFDGSLGII 67 (286)
Q Consensus 58 -----------g-----------------------------------------------------------~~D~k~gv~ 67 (286)
| +.|++.|++
T Consensus 93 ~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~gkalDnR~g~~ 172 (344)
T PRK09961 93 QLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCY 172 (344)
T ss_pred CCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEEeechhhHhHH
Confidence 1 136789999
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhccccc
Q 023187 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV 118 (286)
Q Consensus 68 a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~ 118 (286)
+++++++.|++. ++..+|+++|+..||. |..||+..+..+++
T Consensus 173 ~lle~l~~l~~~----~~~~~v~~~~tvqEEv-----G~rGa~~aa~~i~p 214 (344)
T PRK09961 173 LLVTLLRELHDA----ELPAEVWLVASSSEEV-----GLRGGQTATRAVSP 214 (344)
T ss_pred HHHHHHHHhhhc----CCCceEEEEEEccccc-----chHHHHHHHhccCC
Confidence 999999999765 3678999999999998 34688766544443
No 72
>PRK09864 putative peptidase; Provisional
Probab=99.00 E-value=2.2e-09 Score=98.51 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCC--------C---------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD--------A--------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~--------~--------------- 57 (286)
.|+.|.++++++.++|+.++.++++|..||+++.. |. ..+.|+|.+|+|.|.- |
T Consensus 15 ~SG~E~~v~~~l~~~l~~~~dev~~D~~GNli~~~-g~--~~~kvml~AHmDevG~mV~~I~~~G~l~~~~lGG~~~~~l 91 (356)
T PRK09864 15 VSGDEQEVRDILINTLEPCVNEITFDGLGSFVARK-GN--KGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSM 91 (356)
T ss_pred CCCchHHHHHHHHHHHHHhCCEEEECCCCCEEEEe-CC--CCcEEEEEecccccCEEEEEECCCCeEEEEeCCCcCcccc
Confidence 48999999999999999999999999999999986 52 2479999999999752 1
Q ss_pred -----------C--------------------------------------------------------------------
Q 023187 58 -----------G-------------------------------------------------------------------- 58 (286)
Q Consensus 58 -----------g-------------------------------------------------------------------- 58 (286)
|
T Consensus 92 ~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~~~~l~~~~i~~ 171 (356)
T PRK09864 92 LNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEANFACWGEDKVVG 171 (356)
T ss_pred CCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCCcEEEcCCEEEE
Confidence 0
Q ss_pred -CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccc
Q 023187 59 -IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVS 119 (286)
Q Consensus 59 -~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~ 119 (286)
+.|++.|+++++++++.|++ +..+|+++|++.||. |+.||+..+..+++|
T Consensus 172 kalDnR~g~~~lle~l~~l~~------~~~~vy~v~TvQEEv-----GlrGA~~aa~~i~PD 222 (356)
T PRK09864 172 KALDNRIGCAMMAELLQTVNN------PEITLYGVGSVEEEV-----GLRGAQTSAEHIKPD 222 (356)
T ss_pred EeCccHHHHHHHHHHHHHhhc------CCCeEEEEEEcchhc-----chHHHHHHHhcCCCC
Confidence 14789999999999998864 457899999999998 456998776655554
No 73
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=98.92 E-value=2.6e-09 Score=89.19 Aligned_cols=62 Identities=34% Similarity=0.375 Sum_probs=51.1
Q ss_pred EeeccCCCCCC--------------------CCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCC
Q 023187 46 LIGSHLDTVVD--------------------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQST 105 (286)
Q Consensus 46 ~~~~H~DtV~~--------------------~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~ 105 (286)
+|.+|+||||. -|..|+|+++++++.+++.|++.+. .++++|.|+|+++||.++
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~---- 74 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGD--DLPGNIIFLFTPDEEIGS---- 74 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTT--TCSSEEEEEEESTCCGTS----
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccc--cccccccccccccccCCC----
Confidence 58899999991 1667999999999999999998777 899999999999999853
Q ss_pred CcchhHhh
Q 023187 106 FLGSAALA 113 (286)
Q Consensus 106 ~~Gs~~~~ 113 (286)
..|++.+.
T Consensus 75 ~~g~~~l~ 82 (189)
T PF01546_consen 75 IGGAKHLL 82 (189)
T ss_dssp TTHHHHHH
T ss_pred cchhhhhh
Confidence 12777654
No 74
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.71 E-value=2e-08 Score=83.60 Aligned_cols=64 Identities=31% Similarity=0.499 Sum_probs=53.6
Q ss_pred EEEeeccCCCCC-------CCCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhc
Q 023187 44 ALLIGSHLDTVV-------DAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (286)
Q Consensus 44 ~l~~~~H~DtV~-------~~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (286)
.|++.+|+|+++ ..|+.|+.+|++++|++++.|++.+. +++++|+|+|+.+||. |+.||+.++.
T Consensus 2 ~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~--~~~~~i~fv~~~~EE~-----gl~GS~~~~~ 72 (179)
T PF04389_consen 2 YIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKP--QPKRTIRFVFFDGEEQ-----GLLGSRAFVE 72 (179)
T ss_dssp EEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTH--SSSEEEEEEEESSGGG-----TSHHHHHHHH
T ss_pred EEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhc--ccCccEEEEEeccccc-----CccchHHHHH
Confidence 589999999976 24899999999999999999999765 7789999999999997 5789998863
No 75
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.50 E-value=5e-07 Score=89.55 Aligned_cols=107 Identities=27% Similarity=0.384 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHcCCE-------EEEc------------------ccccEEEEEcCCCCCC-CEEEeeccCCCCCCC
Q 023187 4 ASVRAGNLIRQWMEDAGLR-------TWVD------------------HLGNVHGRVEGLNASA-QALLIGSHLDTVVDA 57 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~-------v~~~------------------~~~nv~a~~~g~~~~~-~~l~~~~H~DtV~~~ 57 (286)
+|..+.+|+.+++.++.-. .++| ..-||+.++.++.... -.|++++|.|+||.+
T Consensus 79 ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~~k~~~~~~~lLlnaHfDSvpt~ 158 (834)
T KOG2194|consen 79 NEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKISPKNGNDKNALLLNAHFDSVPTG 158 (834)
T ss_pred hHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecCCCCCCccceeeeeccccccCCC
Confidence 5668888888887664211 1111 1247888886654433 489999999999986
Q ss_pred -CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccc
Q 023187 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (286)
Q Consensus 58 -g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (286)
|+.|+-++++++|+++|.+.+... .+.++|+|+|..+||. ++.||..+..+.+
T Consensus 159 ~gAtDDg~~va~mLe~lRv~s~~~~--~l~~~vVFLfNgaEE~-----~L~gsH~FItQH~ 212 (834)
T KOG2194|consen 159 PGATDDGSGVASMLEALRVLSKSDK--LLTHSVVFLFNGAEES-----GLLGSHAFITQHP 212 (834)
T ss_pred CCCCcchhHHHHHHHHHHHhhcCCC--cccccEEEEecCcccc-----hhhhcccceecCh
Confidence 778888999999999999998765 6799999999999998 4679888876444
No 76
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.05 E-value=9.8e-06 Score=72.88 Aligned_cols=48 Identities=23% Similarity=0.212 Sum_probs=38.9
Q ss_pred CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhccc
Q 023187 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (286)
Q Consensus 60 ~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~ 116 (286)
.|++.|+++++++++.|++.+ ...+|+|+|++.||. |+.|++..+..+
T Consensus 133 lDdR~g~~~lle~l~~l~~~~----~~~~v~~v~tvqEEv-----G~rGA~~aa~~i 180 (292)
T PF05343_consen 133 LDDRAGCAVLLELLRELKEKE----LDVDVYFVFTVQEEV-----GLRGAKTAAFRI 180 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTSS-----SSEEEEEEESSCTT-----TSHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHhhcC----CCceEEEEEEeeeee-----cCcceeeccccc
Confidence 377899999999999999874 458999999999998 456888665433
No 77
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=97.87 E-value=4.5e-05 Score=72.33 Aligned_cols=67 Identities=34% Similarity=0.501 Sum_probs=59.1
Q ss_pred CCEEEeeccCCCCCC-CCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccc
Q 023187 42 AQALLIGSHLDTVVD-AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (286)
Q Consensus 42 ~~~l~~~~H~DtV~~-~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (286)
.+.+++.+|+|++|. -|+.|+.+|++++|+++|.|+.. +++.+|+|+++..||. |+.||.+++.++.
T Consensus 208 ~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~----~p~~~v~f~~~~aEE~-----Gl~GS~~~~~~~~ 275 (435)
T COG2234 208 DSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGN----PPKRTVRFVAFGAEES-----GLLGSEAYVKRLS 275 (435)
T ss_pred CceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcC----CCCceEEEEEecchhh-----cccccHHHHhcCC
Confidence 467888899999887 49999999999999999999987 5889999999999998 5689999988665
No 78
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=97.70 E-value=0.00012 Score=72.56 Aligned_cols=82 Identities=24% Similarity=0.384 Sum_probs=64.5
Q ss_pred EcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHH---HHcCCCCCCCcCEEEEEecCCCCcc
Q 023187 25 VDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVL---KSTGKLGKLKRPVEVIAFSDEEGVR 101 (286)
Q Consensus 25 ~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L---~~~~~~~~~~~~i~li~~~dEE~~~ 101 (286)
..+..||+++++|+......|++++|-|+.-.| +.|-..|.+.++...+.| .+.+. +|.++|+|+.|.+||.
T Consensus 335 ~~ki~NIig~I~Gs~epD~~ViigahrDSw~~G-a~dp~sGta~Ll~i~~~~~~~~k~gw--rP~RtI~F~sWdAeEf-- 409 (702)
T KOG2195|consen 335 ETKIQNIIGKIEGSEEPDRYVIIGAHRDSWTFG-AIDPNSGTALLLEIARALSKLKKRGW--RPRRTILFASWDAEEF-- 409 (702)
T ss_pred eeeeeeEEEEEecCcCCCeEEEEeccccccccC-CcCCCccHHHHHHHHHHHHHHHHcCC--CccceEEEEEccchhc--
Confidence 345679999999965456889999999998776 666666666566655544 56788 8999999999999998
Q ss_pred CCCCCcchhHhhc
Q 023187 102 FQSTFLGSAALAG 114 (286)
Q Consensus 102 ~~~~~~Gs~~~~~ 114 (286)
|+.||--+++
T Consensus 410 ---GliGStE~~E 419 (702)
T KOG2195|consen 410 ---GLLGSTEWAE 419 (702)
T ss_pred ---cccccHHHHH
Confidence 5689987765
No 79
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.43 E-value=0.00076 Score=59.14 Aligned_cols=112 Identities=20% Similarity=0.301 Sum_probs=80.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc-----------cccEEEEEcCCCCCCCEEEeeccCCCC-CCC----CCCccHHH
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH-----------LGNVHGRVEGLNASAQALLIGSHLDTV-VDA----GIFDGSLG 65 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~-----------~~nv~a~~~g~~~~~~~l~~~~H~DtV-~~~----g~~D~k~g 65 (286)
|..-+++.+||.+.|+++|..++.+. ..|+++++..+ ....+++.+|+|+- +++ |+.|-..-
T Consensus 68 s~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~--A~r~lVlachydsk~~p~~~~vgatdsAvp 145 (338)
T KOG3946|consen 68 SPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPN--ASRYLVLACHYDSKIFPGGMFVGATDSAVP 145 (338)
T ss_pred CCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCC--cchheeeecccccccCCCcceEeecccccc
Confidence 45678899999999999999887653 35799998643 34679999999995 333 56677777
Q ss_pred HHHHHHHHHHHHHcC--CCCCCCcCEEEEEecCCCCcc---CCCCCcchhHhhcc
Q 023187 66 IITAISALKVLKSTG--KLGKLKRPVEVIAFSDEEGVR---FQSTFLGSAALAGI 115 (286)
Q Consensus 66 v~a~l~a~~~L~~~~--~~~~~~~~i~li~~~dEE~~~---~~~~~~Gs~~~~~~ 115 (286)
+++++..++.|...- ....+.-.+.++|+-+||.-+ -+-+..||++++.+
T Consensus 146 camll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA~~ 200 (338)
T KOG3946|consen 146 CAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLAAK 200 (338)
T ss_pred HHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHHHH
Confidence 777788888775421 001345679999999999621 12356799988764
No 80
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=96.15 E-value=0.021 Score=49.74 Aligned_cols=67 Identities=18% Similarity=0.300 Sum_probs=52.5
Q ss_pred CEEEeeccCCCCC--CC---CCCccHHHHHHHHHHHHHHHHc-CCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhc
Q 023187 43 QALLIGSHLDTVV--DA---GIFDGSLGIITAISALKVLKST-GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (286)
Q Consensus 43 ~~l~~~~H~DtV~--~~---g~~D~k~gv~a~l~a~~~L~~~-~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (286)
|.|++.+.||+.. ++ |+...-.|+.+.|++++.|.+. .-...++++|.|+|+.+|-- ++.||..+..
T Consensus 1 ~iIlv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~-----dYiGS~R~vy 73 (234)
T PF05450_consen 1 PIILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESF-----DYIGSSRFVY 73 (234)
T ss_pred CEEEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccc-----cccchHHHHH
Confidence 5688999999863 32 6667779999999999999765 11125789999999999987 5789998764
No 81
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=94.47 E-value=0.13 Score=47.09 Aligned_cols=79 Identities=28% Similarity=0.299 Sum_probs=57.1
Q ss_pred ccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCC----
Q 023187 29 GNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQS---- 104 (286)
Q Consensus 29 ~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~---- 104 (286)
.|+++.-.+ ....+++.+|+|+-. .|..|+..|++++++++..|...+. .+.++.+++||.+.++.
T Consensus 179 y~~Ia~~~~---en~vv~i~AH~DHW~-~G~tDN~lg~~~AV~~~~~lr~~~~------~~~lv~FtAEE~g~p~~~sfy 248 (486)
T COG4882 179 YNVIAVDGG---ENGVVLIGAHLDHWY-TGFTDNILGVAQAVETAGRLRGRGL------AAGLVVFTAEEHGMPGMASFY 248 (486)
T ss_pred EEEEEecCC---CCCceEEeechhhhh-hcccchhhhHHHHHHHHHHHhhcCc------ceeEEEEeccccCCCCCccee
Confidence 356665432 346899999999965 4778999999999999999998764 36677788999865431
Q ss_pred CCcchhHhhcccc
Q 023187 105 TFLGSAALAGILP 117 (286)
Q Consensus 105 ~~~Gs~~~~~~~~ 117 (286)
...||+.+....+
T Consensus 249 Wa~GSr~~lk~~k 261 (486)
T COG4882 249 WAAGSRGLLKESK 261 (486)
T ss_pred ecccchHHHhhcC
Confidence 2357776665444
No 82
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=91.62 E-value=0.74 Score=43.19 Aligned_cols=81 Identities=19% Similarity=0.267 Sum_probs=55.9
Q ss_pred ccEEEEEc-CC-----CCCCCEEEeeccCCCCCCC-----CCCccHHHHHHHHHHHHHHHHcC-C-CCCCCcCEEEEEec
Q 023187 29 GNVHGRVE-GL-----NASAQALLIGSHLDTVVDA-----GIFDGSLGIITAISALKVLKSTG-K-LGKLKRPVEVIAFS 95 (286)
Q Consensus 29 ~nv~a~~~-g~-----~~~~~~l~~~~H~DtV~~~-----g~~D~k~gv~a~l~a~~~L~~~~-~-~~~~~~~i~li~~~ 95 (286)
.|+.+++. |- ....|+|++.+|+||-... |+.-+-+|+.+.|+.++.+.+.. . ....+.+|.|+.+.
T Consensus 194 ~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~ 273 (555)
T KOG2526|consen 194 LNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTA 273 (555)
T ss_pred ceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEcc
Confidence 57888886 32 2357999999999996432 44445678888899998887642 1 01346789998887
Q ss_pred CCCCccCCCCCcchhHhhc
Q 023187 96 DEEGVRFQSTFLGSAALAG 114 (286)
Q Consensus 96 dEE~~~~~~~~~Gs~~~~~ 114 (286)
+=- + .+.|++.|.+
T Consensus 274 aG~---l--NyqGTkkWLe 287 (555)
T KOG2526|consen 274 AGK---L--NYQGTKKWLE 287 (555)
T ss_pred Ccc---c--cccchhhhhh
Confidence 533 2 4579988765
No 83
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=81.53 E-value=3.6 Score=38.10 Aligned_cols=77 Identities=19% Similarity=0.206 Sum_probs=47.8
Q ss_pred CEEEEcc---ccc-EEEE--EcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEe
Q 023187 21 LRTWVDH---LGN-VHGR--VEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAF 94 (286)
Q Consensus 21 ~~v~~~~---~~n-v~a~--~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~ 94 (286)
++|.+|. .|+ -++. ++|. ..+.|+|.+|+.+ +.-+.|.-+|++.+++.++.|++.. .+.+.+|+|.
T Consensus 104 Y~V~IdS~l~~G~L~ygE~~ipG~--s~~EillsthiCH--PsmANdnLSG~~v~~~La~~L~~~~----~rytYRflf~ 175 (386)
T PF09940_consen 104 YEVVIDSTLEDGSLTYGEFVIPGE--SDEEILLSTHICH--PSMANDNLSGPAVLTFLAKWLKQLP----NRYTYRFLFV 175 (386)
T ss_dssp EEEEEEEEEES-EEEEEEEEE--S--SS-EEEEEEE------S-TTTTHHHHHHHHHHHHHHTTS------SSEEEEEEE
T ss_pred eEEEEeeeecCCceeEEEEEecCC--CCCeEEEEEeccC--cccccccccHHHHHHHHHHHHhcCC----cCceEEEEEc
Confidence 4555543 244 2333 4674 3589999999987 4568899999999999999999874 5589999999
Q ss_pred cCCCCccCCCCCcchhHhhc
Q 023187 95 SDEEGVRFQSTFLGSAALAG 114 (286)
Q Consensus 95 ~dEE~~~~~~~~~Gs~~~~~ 114 (286)
| |+ .||-.+..
T Consensus 176 P--eT-------IGsI~yLs 186 (386)
T PF09940_consen 176 P--ET-------IGSITYLS 186 (386)
T ss_dssp ---TT-------HHHHHHHH
T ss_pred c--cc-------HHHHHHHH
Confidence 9 55 37765543
No 84
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=81.35 E-value=21 Score=32.47 Aligned_cols=90 Identities=14% Similarity=0.121 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHcCCEEEEcc--------c-------------cc-EEEEEcCCC-CCCCEEEeecc---CCC-----C
Q 023187 6 VRAGNLIRQWMEDAGLRTWVDH--------L-------------GN-VHGRVEGLN-ASAQALLIGSH---LDT-----V 54 (286)
Q Consensus 6 ~~~~~~l~~~l~~~G~~v~~~~--------~-------------~n-v~a~~~g~~-~~~~~l~~~~H---~Dt-----V 54 (286)
...++++++.++++|+++++-. . +. ++.++.|.. ...++|.|.|- +|| -
T Consensus 18 ~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i~LVGKGiTFDtGG~~lK 97 (311)
T PF00883_consen 18 ETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPIALVGKGITFDTGGLSLK 97 (311)
T ss_dssp HHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEEEEEEEEEEEEE-TTSSS
T ss_pred HHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccEEEEcceEEEecCCccCC
Confidence 3567889999999999887521 0 12 455666654 34456666543 222 2
Q ss_pred CCCCCCcc---HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 55 VDAGIFDG---SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 55 ~~~g~~D~---k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
|.++-..| ++|-++.+.+++.+.+.+ ++-+|..+.-..|-.
T Consensus 98 p~~~M~~Mk~DM~GAAaV~ga~~aia~lk----~~vnV~~~l~~~EN~ 141 (311)
T PF00883_consen 98 PSGGMEGMKYDMGGAAAVLGAMRAIAKLK----LPVNVVAVLPLAENM 141 (311)
T ss_dssp CSTTGGGGGGGGHHHHHHHHHHHHHHHCT-----SSEEEEEEEEEEE-
T ss_pred CCcchhhcccCcchHHHHHHHHHHHHHcC----CCceEEEEEEccccc
Confidence 22232222 267778899999999885 558888888888764
No 85
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=80.79 E-value=20 Score=34.56 Aligned_cols=87 Identities=15% Similarity=0.108 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHcCCEEEEcc--------cccEEEEEcCCCCCCCEEEeeccCCCCC-------CC-------CCC----
Q 023187 7 RAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGLNASAQALLIGSHLDTVV-------DA-------GIF---- 60 (286)
Q Consensus 7 ~~~~~l~~~l~~~G~~v~~~~--------~~nv~a~~~g~~~~~~~l~~~~H~DtV~-------~~-------g~~---- 60 (286)
..++++++.+++.|+++++-. .+-+++.-.|+. ..|.++...+...-+ .| |++
T Consensus 175 ~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~-~~p~lv~l~Y~g~~~~~~~i~LVGKGiTFDsGG~slKp 253 (468)
T cd00433 175 YLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSE-EPPRLIVLEYKGKGASKKPIALVGKGITFDTGGLSLKP 253 (468)
T ss_pred HHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCC-CCCEEEEEEECCCCCCCCcEEEEcCceEecCCCccccC
Confidence 457788888888899987632 233666655553 235555555443211 01 332
Q ss_pred ---------ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 61 ---------DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 61 ---------D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
|| +|-|+.+.+++.+.+.+ ++.+|..+.-..|-.
T Consensus 254 ~~~M~~Mk~DM-~GAAaVlga~~aia~l~----~~vnV~~i~~~~EN~ 296 (468)
T cd00433 254 AAGMDGMKYDM-GGAAAVLGAMKAIAELK----LPVNVVGVLPLAENM 296 (468)
T ss_pred ccChhhccccc-hhHHHHHHHHHHHHHcC----CCceEEEEEEeeecC
Confidence 34 67788899999999885 678898888888765
No 86
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=80.53 E-value=5.3 Score=38.89 Aligned_cols=74 Identities=15% Similarity=0.171 Sum_probs=52.8
Q ss_pred ccEEEEEcCCCC-CCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCc
Q 023187 29 GNVHGRVEGLNA-SAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107 (286)
Q Consensus 29 ~nv~a~~~g~~~-~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~ 107 (286)
.|+++.++..|. +..++++..-++.. .+ .-+..|++.+++.++++++..+ ..++|+|+|+.+|..
T Consensus 4 ~nvy~i~rapR~d~tEaivl~~~~~~~--~~-~~n~~~v~l~lal~~~~~~~~~---wsKDii~l~~~~~~~-------- 69 (504)
T PF04114_consen 4 TNVYGILRAPRGDGTEAIVLVVPWRDS--DG-EYNAGGVALALALARYFRRQSY---WSKDIIFLFTDDELA-------- 69 (504)
T ss_pred eEEEEEEecCCCCCceeEEEEEecCCC--Cc-ccchhhHHHHHHHHHHhhhchh---hhccEEEEecCCcch--------
Confidence 478988865443 34778887665542 22 2237888888999999998875 789999999876544
Q ss_pred chhHhhccc
Q 023187 108 GSAALAGIL 116 (286)
Q Consensus 108 Gs~~~~~~~ 116 (286)
|.+.+.+.+
T Consensus 70 g~~awl~~Y 78 (504)
T PF04114_consen 70 GMQAWLEAY 78 (504)
T ss_pred HHHHHHHHH
Confidence 787776533
No 87
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=80.14 E-value=17 Score=35.20 Aligned_cols=87 Identities=15% Similarity=0.140 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHcCCEEEEcc--------cccEEEEEcCCCCCCCEEEeeccCCC----CCCC-------CC--------
Q 023187 7 RAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGLNASAQALLIGSHLDT----VVDA-------GI-------- 59 (286)
Q Consensus 7 ~~~~~l~~~l~~~G~~v~~~~--------~~nv~a~~~g~~~~~~~l~~~~H~Dt----V~~~-------g~-------- 59 (286)
..++++++.++++|+++++-. .+-+++.-+|+. ..|.++...+.-. +-.| |+
T Consensus 192 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~-~~prli~l~Y~g~~~~i~LVGKGITFDsGG~slKp~~~ 270 (483)
T PRK00913 192 YLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSA-NPPRLIVLEYKGGKKPIALVGKGLTFDSGGISLKPAAG 270 (483)
T ss_pred HHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCC-CCCeEEEEEECCCCCeEEEEcCceEecCCCccCCCCcC
Confidence 356677777788899987522 234777766653 3466666655421 1111 22
Q ss_pred -----CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 60 -----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 60 -----~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
.|| +|-|+.+.+++++.+.+ ++-+|..+.-..|-.
T Consensus 271 M~~MK~DM-~GAAaVlga~~aia~lk----l~vnV~~v~~l~ENm 310 (483)
T PRK00913 271 MDEMKYDM-GGAAAVLGTMRALAELK----LPVNVVGVVAACENM 310 (483)
T ss_pred hhhccccc-HhHHHHHHHHHHHHHcC----CCceEEEEEEeeccC
Confidence 244 67788899999999885 678899988888875
No 88
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=79.49 E-value=9.4 Score=37.32 Aligned_cols=91 Identities=14% Similarity=0.159 Sum_probs=59.6
Q ss_pred HHHHHHHHHcCCEEEEccc----------ccEEEEEcCCCCC-CCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHH
Q 023187 10 NLIRQWMEDAGLRTWVDHL----------GNVHGRVEGLNAS-AQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKS 78 (286)
Q Consensus 10 ~~l~~~l~~~G~~v~~~~~----------~nv~a~~~g~~~~-~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~ 78 (286)
.++...+++.|.++..... .|+++.+.+-|.+ ...+++.--++- +.|. | ..+++-+++.++.+++
T Consensus 92 ~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl~vP~~~--~~~~-~-~~~v~l~lsla~~f~r 167 (617)
T KOG3566|consen 92 AWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVLVVPYGR--SSGS-N-SASVALLLSLADYFSR 167 (617)
T ss_pred hHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEEEEeccc--CCCc-c-hhHHHHHHHHHHHhcC
Confidence 4567778888998765433 4899998765433 467877433322 1122 1 5566666888888887
Q ss_pred cCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcc
Q 023187 79 TGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (286)
Q Consensus 79 ~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~ 115 (286)
..+ ..++|+++|+-++= .|...+...
T Consensus 168 ~~y---WsKDII~v~~d~~~--------~g~~AwLea 193 (617)
T KOG3566|consen 168 WVY---WSKDIIFVFTDGPA--------LGLDAWLEA 193 (617)
T ss_pred Cee---ecccEEEEEeCCcc--------ccHHHHHHH
Confidence 764 78999999997633 276666543
No 89
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=68.67 E-value=66 Score=31.71 Aligned_cols=86 Identities=17% Similarity=0.150 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHcCCEEE-Ecc--------cccEEEEEcCCCCCCCEEEeeccCCC-------CCCC-------CC-----
Q 023187 8 AGNLIRQWMEDAGLRTW-VDH--------LGNVHGRVEGLNASAQALLIGSHLDT-------VVDA-------GI----- 59 (286)
Q Consensus 8 ~~~~l~~~l~~~G~~v~-~~~--------~~nv~a~~~g~~~~~~~l~~~~H~Dt-------V~~~-------g~----- 59 (286)
.++++.+.+.+.|++++ +-. .+-+++.-.|+. ..|.++...|.-. +-+| |+
T Consensus 234 ~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~-~pPrli~L~Y~g~~~~~~~iaLVGKGITFDSGGisLKP 312 (569)
T PTZ00412 234 YAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSR-HEPYLVVFEYIGNPRSSAATALVGKGVTFDCGGLNIKP 312 (569)
T ss_pred HHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCC-CCCEEEEEEeCCCCCCCCcEEEEcCceEEcCCCCCCCC
Confidence 45666666777899885 421 233677666653 2355555544311 0011 22
Q ss_pred --------CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 60 --------FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 60 --------~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
+|| +|-++.+.+++.+.+.+ ++.+|..+.-..|-.
T Consensus 313 ~~~M~~MK~DM-gGAAaVlga~~AiA~Lk----lpvnVv~iiplaENm 355 (569)
T PTZ00412 313 YGSMETMHSDM-MGAATVMCTLKAIAKLQ----LPVNVVAAVGLAENA 355 (569)
T ss_pred ccChhhhhccc-hhHHHHHHHHHHHHHcC----CCeEEEEEEEhhhcC
Confidence 244 56678889999998885 567888888888764
No 90
>PRK02256 putative aminopeptidase 1; Provisional
Probab=54.87 E-value=21 Score=34.37 Aligned_cols=39 Identities=23% Similarity=0.128 Sum_probs=31.1
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCc
Q 023187 56 DAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (286)
Q Consensus 56 ~~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~ 100 (286)
.+.+.|+..++.+++.+++.+. .+...+.++++..||.+
T Consensus 255 ~s~rLDNr~~~~~~leal~~~~------~~~~~~~~~~~dqEEVG 293 (462)
T PRK02256 255 GAYGQDDRVCAYTSLEALLELE------NPEKTAVVLLVDKEEIG 293 (462)
T ss_pred eccccccHHHHHHHHHHHHhcc------cCCCeEEEEEEcccccC
Confidence 3467899999999999886553 24568999999999985
No 91
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=45.58 E-value=1.5e+02 Score=28.99 Aligned_cols=88 Identities=15% Similarity=0.021 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHcCCEEEEcc--------cccEEEEEcCCCCCCCEEEeeccCCCCCC--------------CCCC----
Q 023187 7 RAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGLNASAQALLIGSHLDTVVD--------------AGIF---- 60 (286)
Q Consensus 7 ~~~~~l~~~l~~~G~~v~~~~--------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~--------------~g~~---- 60 (286)
..++++.+++...|+.+++.. .+-+++.-+++. .-|.++..+|.++=+. .|+.
T Consensus 210 ~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~-~pP~ll~lsY~g~~~~~~~i~lvGKGvtfDsGGl~iK~ 288 (513)
T KOG2597|consen 210 QFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASC-EPPRLLELSYKGTSGADKTILLVGKGVTFDSGGLSIKP 288 (513)
T ss_pred HHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccC-CCCEEEEEEEcCCCCCcceEEEEecceEEecCcccccc
Confidence 457888888999998766421 223555545542 3466777777666332 1333
Q ss_pred ---------ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCc
Q 023187 61 ---------DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (286)
Q Consensus 61 ---------D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~ 100 (286)
|| +|-|+.+.+++++.+.+ ++-++.+++---|-..
T Consensus 289 ~~~M~~mr~dm-~GAA~v~~~~~a~~~l~----~~in~~~v~plcENm~ 332 (513)
T KOG2597|consen 289 KTGMDGMRRDM-GGAAVVLGAFRAAAQLS----LPINVHAVLPLCENMP 332 (513)
T ss_pred CCChhhhhhhc-cccHHHHHHHHHHHhcC----CCCceEEEEeeeccCC
Confidence 33 56677788999888886 4488999888887754
No 92
>PRK05015 aminopeptidase B; Provisional
Probab=42.91 E-value=3.1e+02 Score=26.20 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=25.7
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCc
Q 023187 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~ 100 (286)
|| +|-|+.+.+++.+.+.+ ++.+|.++....|-..
T Consensus 214 DM-gGAAaV~ga~~~a~~~~----l~~nV~~il~~aENmi 248 (424)
T PRK05015 214 DM-GGAATVTGALALAITRG----LNKRVKLFLCCAENLI 248 (424)
T ss_pred ch-hHHHHHHHHHHHHHhcC----CCceEEEEEEecccCC
Confidence 44 45577788887777775 5678999998888753
No 93
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=36.55 E-value=97 Score=29.41 Aligned_cols=52 Identities=25% Similarity=0.325 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-E-Ec----cc---------c-cEEEEEcCCC--CCCCEEEeeccCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLRT-W-VD----HL---------G-NVHGRVEGLN--ASAQALLIGSHLDT 53 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v-~-~~----~~---------~-nv~a~~~g~~--~~~~~l~~~~H~Dt 53 (286)
|+.++.+..++++.|.+.||.- + .+ .. + +++|.+-|.+ ...+--++.+|+|+
T Consensus 20 spTpyh~v~~i~~~L~~~Gf~~l~e~~~w~~~~ggkyf~~r~gssliAf~ig~~~~~~~gf~IigaHtDS 89 (437)
T COG1362 20 SPTPYHVVANIAERLLKAGFRELEEKDAWKDKPGGKYFVTRNGSSLIAFIIGKKWKLESGFRIIGAHTDS 89 (437)
T ss_pred CCChHHHHHHHHHHHHHcCchhhhhhhcccccCCCeEEEEcCCceEEEEEecCCCCCCCCeEEEEeecCC
Confidence 5678999999999999999842 1 11 11 2 3555554443 34466778899998
No 94
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=34.77 E-value=3e+02 Score=26.82 Aligned_cols=34 Identities=21% Similarity=0.111 Sum_probs=26.4
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
|| +|-|+.+.++.++.+.+ ++-+|..+.-.-|--
T Consensus 276 DM-gGAAaV~g~~~a~a~l~----l~vnv~~vl~~~ENm 309 (485)
T COG0260 276 DM-GGAAAVLGAMRALAELK----LPVNVVGVLPAVENM 309 (485)
T ss_pred cc-chHHHHHHHHHHHHHcC----CCceEEEEEeeeccC
Confidence 44 56677889999999885 567888888888764
No 95
>KOG2657 consensus Transmembrane glycoprotein nicastrin [Signal transduction mechanisms; Posttranslational modification, protein turnover, chaperones]
Probab=33.88 E-value=1.2e+02 Score=29.52 Aligned_cols=80 Identities=20% Similarity=0.274 Sum_probs=55.8
Q ss_pred ccEEEEEcC-----C-CCCCCEEEeeccCCCCCC-----CCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCC
Q 023187 29 GNVHGRVEG-----L-NASAQALLIGSHLDTVVD-----AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDE 97 (286)
Q Consensus 29 ~nv~a~~~g-----~-~~~~~~l~~~~H~DtV~~-----~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dE 97 (286)
.|+|..++. + .+..+.++...-||+-.- .|+.--..++.+.|+|+++|++..-...++++|.|+|...|
T Consensus 158 ynvws~l~pi~ts~tnk~~~~vvv~tarmdsrsfF~n~s~Ga~S~~~slv~~laaa~al~r~pai~nl~rnV~f~~f~ge 237 (596)
T KOG2657|consen 158 YNVWSFLTPIPTSPTNKTISKVVVVTARMDSRSFFPNISVGAVSVLTSLVSVLAAARALKRQPAINNLNRNVFFAFFNGE 237 (596)
T ss_pred ccceeccCccccccccCcCcceeeeeeecccccccccccCCccccchhHHHHHHHHHHhccCcccccccceeEEEEeecc
Confidence 357766532 1 223577888888998531 24333667888889999999876544568899999999998
Q ss_pred CCccCCCCCcchhHhh
Q 023187 98 EGVRFQSTFLGSAALA 113 (286)
Q Consensus 98 E~~~~~~~~~Gs~~~~ 113 (286)
-. +++|+..++
T Consensus 238 t~-----~ylgS~r~~ 248 (596)
T KOG2657|consen 238 TL-----DYLGSGRAA 248 (596)
T ss_pred ee-----eeccchhhh
Confidence 76 357887554
No 96
>COG1360 MotB Flagellar motor protein [Cell motility and secretion]
Probab=32.96 E-value=1.7e+02 Score=25.49 Aligned_cols=53 Identities=26% Similarity=0.362 Sum_probs=38.3
Q ss_pred EEEeeccCCCCCCCCCCcc--HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 44 ALLIGSHLDTVVDAGIFDG--SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 44 ~l~~~~H~DtV~~~g~~D~--k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
.|.+.||+|.+|..+.+-. ..+.+=+..+++.|.+.|. .+...+.+....|-+
T Consensus 165 ~I~I~GHTDn~p~~~~~~sNWeLS~aRA~~v~~~L~~~g~--~~~~~~~~~G~gd~~ 219 (244)
T COG1360 165 NIRIEGHTDNVPIKGSFYSNWELSAARAQSVVRVLINGGL--VEAKRLSVVGYADTR 219 (244)
T ss_pred eEEEEeCCCCCCcCCCCCchHHHHHHHHHHHHHHHHHcCC--CCcceEEEEeccccc
Confidence 8999999999987654322 4566666888999998774 456667776666554
No 97
>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only]
Probab=32.50 E-value=1.4e+02 Score=27.43 Aligned_cols=72 Identities=22% Similarity=0.221 Sum_probs=48.2
Q ss_pred HHHcCCEEEEcc---ccc-EEEEE--cCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCE
Q 023187 16 MEDAGLRTWVDH---LGN-VHGRV--EGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPV 89 (286)
Q Consensus 16 l~~~G~~v~~~~---~~n-v~a~~--~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i 89 (286)
|++-.++|.+|. .|+ .++.+ +|+ ..+.|++..|+=+ +.=+.|..+|++.....++.|+.. +.+.+-
T Consensus 148 l~dgdyeVvIDae~~dG~L~ygefi~rg~--~~~eiLlst~lCH--PSmaNdn~SG~all~~lak~l~~~----ktrysY 219 (435)
T COG4310 148 LEDGDYEVVIDAEHEDGSLDYGEFIHRGT--SKDEILLSTYLCH--PSMANDNLSGLALLTFLAKALKSL----KTRYSY 219 (435)
T ss_pred hhcCCeEEEEecccccCceehhheeccCC--ccceeeeeecccC--hhhccCccchHHHHHHHHHHHHhc----cceeeE
Confidence 444456666653 355 44433 454 3578888888644 334568889998777788888876 467788
Q ss_pred EEEEec
Q 023187 90 EVIAFS 95 (286)
Q Consensus 90 ~li~~~ 95 (286)
+|+|.|
T Consensus 220 Rfvf~P 225 (435)
T COG4310 220 RFVFAP 225 (435)
T ss_pred EEEecc
Confidence 999987
No 98
>PF03738 GSP_synth: Glutathionylspermidine synthase preATP-grasp; InterPro: IPR005494 This region contains the Glutathionylspermidine synthase enzymatic activity 6.3.1.8 from EC. This is the C-terminal region in bienzymes such as P43675 from SWISSPROT. Glutathionylspermidine (GSP) synthetases of Trypanosomatidae and Escherichia coli couple hydrolysis of ATP (to ADP and Pi) with formation of an amide bond between spermidine and the glycine carboxylate of glutathione (gamma-Glu-Cys-Gly). In the pathogenic trypanosomatids, this reaction is the penultimate step in the biosynthesis of the antioxidant metabolite, trypanothione (N1,N8-bis-(glutathionyl)spermidine), and is a target for drug design [].; PDB: 2VPM_B 2VOB_B 2VPS_A 2IO9_A 2IO8_A 2IOB_A 2IOA_B 2IO7_B 3O98_B.
Probab=31.30 E-value=1e+02 Score=22.56 Aligned_cols=30 Identities=17% Similarity=0.170 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccE
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNV 31 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv 31 (286)
+.+|..++.||++.+++.|+++..-...++
T Consensus 10 ~~ED~~t~~yL~~~a~qaG~~~~~~~i~~l 39 (97)
T PF03738_consen 10 YPEDRGTVQYLMDTARQAGLDTRFIPIEDL 39 (97)
T ss_dssp -HHHHHHHHHHHHHHHHTT-EEEEETTTTE
T ss_pred ChHHHHHHHHHHHHHHHCCCCeEEechHhe
Confidence 468899999999999999999876555453
No 99
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=31.24 E-value=74 Score=30.71 Aligned_cols=42 Identities=17% Similarity=0.102 Sum_probs=27.9
Q ss_pred CCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEE-ecCCCCc
Q 023187 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIA-FSDEEGV 100 (286)
Q Consensus 57 ~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~-~~dEE~~ 100 (286)
+.+.|+..++.++|.+++.+..... +....+.+++ +..||++
T Consensus 247 s~rlDnr~~~~~~l~al~~~~~~~~--~~~~~~~v~~~~d~EEVG 289 (465)
T PTZ00371 247 SPRLDNLGSSFCAFKALTEAVESLG--ENSSNIRMVCLFDHEEVG 289 (465)
T ss_pred EecchhHHHHHHHHHHHHhcccccc--CCCCceEEEEEECCcCCC
Confidence 4678999999999999876543200 0123455555 8999984
No 100
>PRK02813 putative aminopeptidase 2; Provisional
Probab=29.17 E-value=56 Score=31.13 Aligned_cols=36 Identities=19% Similarity=0.115 Sum_probs=27.7
Q ss_pred CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCcc
Q 023187 59 IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (286)
Q Consensus 59 ~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~ 101 (286)
+.|+..++.+++.++..+. . ...+.++|+..||.+.
T Consensus 232 ~lDnr~~~~~~l~al~~~~------~-~~~~~~~~~d~EEVGs 267 (428)
T PRK02813 232 RLDNLSSCHAGLEALLAAA------S-DATNVLAAFDHEEVGS 267 (428)
T ss_pred cchhHHHHHHHHHHHHhcC------C-CCeEEEEEEecCccCC
Confidence 4688899888888875542 2 4679999999999853
No 101
>PRK09038 flagellar motor protein MotD; Reviewed
Probab=28.89 E-value=4.2e+02 Score=23.59 Aligned_cols=54 Identities=17% Similarity=0.257 Sum_probs=37.6
Q ss_pred CEEEeeccCCCCCCC-CCC--ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 43 QALLIGSHLDTVVDA-GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~-g~~--D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
..|.+.||.|.+|.. ..+ .-..+..=+..+.++|.+.|+ ....|.+....+...
T Consensus 164 ~~I~I~GHTD~~~~~~~~~~~Nw~LS~~RA~aV~~~L~~~Gi---~~~ri~~~G~G~~~P 220 (281)
T PRK09038 164 NPIHVEGFTDNVPIATAQFPSNWELSAARAASVVRLLADDGV---APSRLAAVGYGEFQP 220 (281)
T ss_pred CeEEEEEECCCCCCcCCCCccHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECCcCC
Confidence 479999999999753 223 234566666788889998887 445687776665553
No 102
>PRK06778 hypothetical protein; Validated
Probab=28.65 E-value=1.2e+02 Score=27.22 Aligned_cols=51 Identities=29% Similarity=0.444 Sum_probs=34.9
Q ss_pred CEEEeeccCCCCCCC-CCCcc-HHHHHHHHHHHHHHHHcCCCCCCCcCE-EEEEecC
Q 023187 43 QALLIGSHLDTVVDA-GIFDG-SLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSD 96 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~-g~~D~-k~gv~a~l~a~~~L~~~~~~~~~~~~i-~li~~~d 96 (286)
..|.+.||.|.+|.. +.+++ ..+.+=+..++++|.+.|+ + ...| ......+
T Consensus 183 ~~I~V~GHTD~~p~~~~~~sNweLS~~RA~~V~~~L~~~Gv--~-~~ri~~v~G~g~ 236 (289)
T PRK06778 183 NKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGM--P-EDKVMQVSAMAD 236 (289)
T ss_pred CcEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCC--C-HHHeeeeeeccC
Confidence 468899999999864 33443 5666666888999998887 4 4455 3444443
No 103
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=27.76 E-value=1.9e+02 Score=27.85 Aligned_cols=52 Identities=12% Similarity=0.262 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-EE-c----cc---------c-cEEEEEcCCC---CCCCEEEeeccCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLRT-WV-D----HL---------G-NVHGRVEGLN---ASAQALLIGSHLDT 53 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v-~~-~----~~---------~-nv~a~~~g~~---~~~~~l~~~~H~Dt 53 (286)
|+.++.+.+++++.|++.||.- .. + .. + .++|..-|.+ ....--++.+|.|.
T Consensus 19 s~t~~hav~~~~~~L~~~GF~~l~e~~~w~l~~g~kyyv~r~~ssl~Af~vg~~~~~~~~g~~ivgaHtDs 89 (465)
T PTZ00371 19 TGSPFHAVQELKERLKKSGFKQLNEGENWKLEKGGKYYLTRNNSTIVAFTVGKKFDAPNGGFKIVGAHTDS 89 (465)
T ss_pred CCCHHHHHHHHHHHHHHCcCEEccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCCeEEEEEeccC
Confidence 5668899999999999999952 21 1 11 1 2555443433 11235688899997
No 104
>PRK08944 motB flagellar motor protein MotB; Reviewed
Probab=27.42 E-value=4.7e+02 Score=23.65 Aligned_cols=54 Identities=17% Similarity=0.266 Sum_probs=37.1
Q ss_pred CEEEeeccCCCCCCC-CCC--ccHHHHHHHHHHHHHHHH-cCCCCCCCcCEEEEEecCCCC
Q 023187 43 QALLIGSHLDTVVDA-GIF--DGSLGIITAISALKVLKS-TGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~-g~~--D~k~gv~a~l~a~~~L~~-~~~~~~~~~~i~li~~~dEE~ 99 (286)
..|.+.||.|.+|.+ +.+ ....+.+=+..++++|.+ .|+ ....|.+....+...
T Consensus 210 ~~I~I~GHTD~~~~~~~~~~~N~~LS~~RA~aV~~~L~~~~Gi---~~~ri~~~G~Ge~~P 267 (302)
T PRK08944 210 GIITVSGHTDNVPISSELYRSNWDLSSARAVAVAHELLKVKGF---DPQRLKVVGMADTQP 267 (302)
T ss_pred CeEEEEEecCCCCCcccccchHHHHHHHHHHHHHHHHHHhcCC---ChhHEEEEEEcCCCc
Confidence 369999999999854 333 345566666788888886 565 455677776665553
No 105
>PRK07033 hypothetical protein; Provisional
Probab=26.99 E-value=5.6e+02 Score=24.43 Aligned_cols=54 Identities=15% Similarity=0.014 Sum_probs=38.1
Q ss_pred CEEEeeccCCCCCCC-CC--CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 43 QALLIGSHLDTVVDA-GI--FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~-g~--~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
..|.+.||.|.++.. +. +....+..=+..+.++|.+.++ ....|......+.+.
T Consensus 345 ~~I~V~GHTD~~~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi---~~~ri~~~G~G~~~P 401 (427)
T PRK07033 345 GNVLVTGYSDNVPIRTARFPSNWELSQARAQAVRALLAARLG---QPERVTAEGRGDSDP 401 (427)
T ss_pred CeEEEEEEeCCCCccccccchHHHHHHHHHHHHHHHHHHcCC---CcceEEEEEECCCCc
Confidence 579999999999854 22 3455666666778888988886 445677776665553
No 106
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=26.97 E-value=65 Score=26.43 Aligned_cols=25 Identities=8% Similarity=0.280 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcc
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVDH 27 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~~ 27 (286)
|+-++++++|+..|++.|++|.+.+
T Consensus 12 GqT~kIA~~iA~~L~e~g~qvdi~d 36 (175)
T COG4635 12 GQTRKIAEYIASHLRESGIQVDIQD 36 (175)
T ss_pred CcHHHHHHHHHHHhhhcCCeeeeee
Confidence 5678999999999999999998643
No 107
>PRK02813 putative aminopeptidase 2; Provisional
Probab=26.33 E-value=2.1e+02 Score=27.23 Aligned_cols=53 Identities=26% Similarity=0.315 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-E-Ecc----c---------c-cEEEEEcCCCCC--CCEEEeeccCCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLRT-W-VDH----L---------G-NVHGRVEGLNAS--AQALLIGSHLDTV 54 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v-~-~~~----~---------~-nv~a~~~g~~~~--~~~l~~~~H~DtV 54 (286)
|+.++.+.+++++.|++.||.- . .+. . + .++|..-|.... ..--++.+|+|.-
T Consensus 18 s~t~~hav~~~~~~L~~~Gf~~l~e~~~w~l~~g~kyy~~r~~~sliAf~vg~~~~~~~g~~iv~aH~DsP 88 (428)
T PRK02813 18 SPSPFHAVANVAQRLEAAGFTELDETDAWKLEPGGRYYVVRNGSSLIAFRVGEGAPAETGFRIVGAHTDSP 88 (428)
T ss_pred CCCHHHHHHHHHHHHHHcCCeeccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCeEEEEEeccCC
Confidence 5678899999999999999952 2 111 1 1 255555444321 2356889999984
No 108
>PRK06667 motB flagellar motor protein MotB; Validated
Probab=26.31 E-value=2.4e+02 Score=24.61 Aligned_cols=54 Identities=20% Similarity=0.257 Sum_probs=37.7
Q ss_pred CEEEeeccCCCCCCC--CCC--ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 43 QALLIGSHLDTVVDA--GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~--g~~--D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
..|.+.||.|.+|.. +.+ .-..+..=+..+.++|.+.+. .+...|.+....+..
T Consensus 160 ~~i~I~GhTD~~~~~~~~~~~~N~~LS~~RA~aV~~~L~~~g~--~~~~ri~~~G~G~~~ 217 (252)
T PRK06667 160 RNFRIEGHTDNVDVNPEGPWKSNWELSGARAVNMLEYILNYGD--QSESWFQVSGFAGSR 217 (252)
T ss_pred ceEEEEEeCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHcCC--CCcceEEEEEECCCC
Confidence 469999999998753 322 234555666788889998886 446678777766554
No 109
>PRK08126 hypothetical protein; Provisional
Probab=26.00 E-value=5.8e+02 Score=24.40 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=36.7
Q ss_pred CEEEeeccCCCCCCC-CCC--ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 43 QALLIGSHLDTVVDA-GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~-g~~--D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
..|.+.||.|.+|.. +.+ ....+..=+..+.++|.+.|+ +...|......+.+
T Consensus 354 ~~I~V~GHTD~~p~~s~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~G~G~~~ 409 (432)
T PRK08126 354 GKVTVTGHTDNQPIRSAQFASNLVLSEKRAAQVAQMLQSAGV---PASRLEAVGKGDAQ 409 (432)
T ss_pred CeEEEEEecCCCCccCCccchHHHHHHHHHHHHHHHHHHcCC---CHHHeEEEEecCcC
Confidence 469999999999853 332 345566666778888888886 45567776665554
No 110
>TIGR03350 type_VI_ompA type VI secretion system OmpA/MotB family protein. The flagellar motor protein MotB and the Gram-negative bacterial outer membrane protein OmpA share a region of sequence homology. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology.
Probab=25.71 E-value=2.2e+02 Score=22.07 Aligned_cols=53 Identities=23% Similarity=0.162 Sum_probs=36.2
Q ss_pred CEEEeeccCCCCCCC-CCC--ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 43 QALLIGSHLDTVVDA-GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~-g~~--D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
..|.+.||.|..+.. +.+ ....+..=+..+..+|.+.|+ +...|.+....+.+
T Consensus 61 ~~i~I~GhTD~~~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi---~~~ri~~~g~G~~~ 116 (137)
T TIGR03350 61 GRITVVGHTDNVPIRTSRFPSNWHLSEARAKAVADVLAQGGV---PAGRVRAEGRGDSE 116 (137)
T ss_pred CeEEEEEecCCCCCccCCcccHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECCCC
Confidence 579999999998753 222 345566666788889998886 44567666554443
No 111
>PF01726 LexA_DNA_bind: LexA DNA binding domain; InterPro: IPR006199 This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins in bacteria. The aligned region contains a variant form of the helix-turn-helix DNA binding motif []. This domain usually at the N terminus is found associated with IPR006198 from INTERPRO the auto-proteolytic domain of LexA 3.4.21.88 from EC.; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1LEA_A 1JHH_A 3JSP_A 1JHF_A 3JSO_B 1LEB_A 3K2Z_A.
Probab=24.09 E-value=86 Score=21.28 Aligned_cols=25 Identities=20% Similarity=0.393 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWV 25 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~ 25 (286)
||....++-+||.++.++.|+...+
T Consensus 4 LT~rQ~~vL~~I~~~~~~~G~~Pt~ 28 (65)
T PF01726_consen 4 LTERQKEVLEFIREYIEENGYPPTV 28 (65)
T ss_dssp --HHHHHHHHHHHHHHHHHSS---H
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCCH
Confidence 5788899999999999999987654
No 112
>smart00853 MutL_C MutL C terminal dimerisation domain. MutL and MutS are key components of the DNA repair machinery that corrects replication errors. MutS recognises mispaired or unpaired bases in a DNA duplex and in the presence of ATP, recruits MutL to form a DNA signaling complex for repair. The N terminal region of MutL contains the ATPase domain and the C terminal is involved in dimerisation.
Probab=23.83 E-value=1.7e+02 Score=22.33 Aligned_cols=26 Identities=12% Similarity=0.110 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVD 26 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~ 26 (286)
+|..|....+-..+.|+++||+++..
T Consensus 61 l~~~e~~~l~~~~~~l~~~Gf~~~~~ 86 (136)
T smart00853 61 LSPEEAALLEEHQELLARLGFELEIF 86 (136)
T ss_pred cCHHHHHHHHHHHHHHHHcCeEEEcc
Confidence 46788888888899999999998753
No 113
>cd02412 30S_S3_KH K homology RNA-binding (KH) domain of the prokaryotic 30S small ribosomal subunit protein S3. S3 is part of the head region of the 30S ribosomal subunit and is believed to interact with mRNA as it threads its way from the latch into the channel. The KH motif is a beta-alpha-alpha-beta-beta unit that folds into an alpha-beta structure with a three stranded beta-sheet interupted by two contiguous helices. In general, KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA.
Probab=23.75 E-value=1.9e+02 Score=21.69 Aligned_cols=42 Identities=14% Similarity=0.369 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHcCCE-EEEccccc-EEEEEcCCCCCCCEEEee
Q 023187 4 ASVRAGNLIRQWMEDAGLR-TWVDHLGN-VHGRVEGLNASAQALLIG 48 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~-v~~~~~~n-v~a~~~g~~~~~~~l~~~ 48 (286)
++..+.+||.+.+...|+. +++.+..| +...+... .|.++++
T Consensus 34 ed~~IR~yL~k~~~~agis~I~I~R~~~~i~I~I~t~---rPg~vIG 77 (109)
T cd02412 34 EDLKIRKFIKKKLKKAGISRIEIERKADRVEVTIHTA---RPGIIIG 77 (109)
T ss_pred hHHHHHHHHHHHHhhCCccEEEEEEcCCCEEEEEEeC---CCCcccC
Confidence 5678999999999999985 44444344 44444332 3566664
No 114
>PRK09039 hypothetical protein; Validated
Probab=23.27 E-value=1.9e+02 Score=26.63 Aligned_cols=52 Identities=27% Similarity=0.314 Sum_probs=35.6
Q ss_pred EEEeeccCCCCCCCC--CCc--cHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 44 ALLIGSHLDTVVDAG--IFD--GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 44 ~l~~~~H~DtV~~~g--~~D--~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
.|.+.||.|.+|..| .+. -..+-.=+..+.++|.+.|+ +...|......+.+
T Consensus 264 ~I~I~GHTD~~p~~~~g~~~~N~~LS~~RA~aV~~~Li~~Gi---~~~ri~~~G~G~~~ 319 (343)
T PRK09039 264 VLRVDGHTDNVPLSGTGRFRDNWELSSARAISVVKFLIALGV---PADRLAAAGFGEFQ 319 (343)
T ss_pred eEEEEEecCCCCccCCCCcccHHHHHHHHHHHHHHHHHHCCC---CHHHeEEEEeCCcC
Confidence 477999999998654 332 24555566788899998887 44567766555444
No 115
>PRK02256 putative aminopeptidase 1; Provisional
Probab=22.07 E-value=2.7e+02 Score=26.92 Aligned_cols=52 Identities=23% Similarity=0.243 Sum_probs=33.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-E-Ecc-----------cc-cEEEEEcCCCC-CCCEEEeeccCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLRT-W-VDH-----------LG-NVHGRVEGLNA-SAQALLIGSHLDT 53 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v-~-~~~-----------~~-nv~a~~~g~~~-~~~~l~~~~H~Dt 53 (286)
|+.++.+.+++++.|++.||.- . .+. .+ .++|..-|... ...--++.+|.|+
T Consensus 38 sptp~Hav~~~~~~L~~~GF~el~e~~~l~~g~kyy~~r~~ssliAf~ig~~~~~~g~~iv~aHtDs 104 (462)
T PRK02256 38 CKTEREAVKEIIELAEEKGFINLEEIIGLKPGDKVYAVNRGKSVALAVIGKEPLEEGLNIIGAHIDS 104 (462)
T ss_pred CCCHHHHHHHHHHHHHHcCCeecccccccCCCCEEEEEcCCCEEEEEEeCCCCCCCceEEEEEecCC
Confidence 4567889999999999999952 1 111 11 25565445432 1224588999998
No 116
>PF08676 MutL_C: MutL C terminal dimerisation domain; InterPro: IPR014790 MutL and MutS are key components of the DNA repair machinery that corrects replication errors []. MutS recognises mispaired or unpaired bases in a DNA duplex and in the presence of ATP, recruits MutL to form a DNA signalling complex for repair. The N-terminal region of MutL contains the ATPase domain and the C-terminal is involved in dimerisation []. ; GO: 0005524 ATP binding, 0006298 mismatch repair; PDB: 3NCV_B 1X9Z_B 3GAB_C 3KDK_A 3KDG_A.
Probab=21.89 E-value=2.1e+02 Score=22.22 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWV 25 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~ 25 (286)
+|..|....+-..+.|+++||+++.
T Consensus 60 ls~~e~~~l~~~~~~L~~~Gf~~~~ 84 (144)
T PF08676_consen 60 LSPQEAELLEENKEELEKLGFEIEE 84 (144)
T ss_dssp --HHHHHHHHHHHHHHHHTT-EEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCeEEEE
Confidence 5778999999999999999999875
No 117
>PRK09040 hypothetical protein; Provisional
Probab=20.63 E-value=2.8e+02 Score=23.65 Aligned_cols=52 Identities=21% Similarity=0.255 Sum_probs=35.8
Q ss_pred EEEeeccCCCCCCCC---CC--ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 44 ALLIGSHLDTVVDAG---IF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 44 ~l~~~~H~DtV~~~g---~~--D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
.|.+.||.|..|... .+ ....+..=+..+.++|.+.|+ +...|......++.
T Consensus 124 ~V~IeGHTD~~~~~~~~~~y~~N~~LS~~RA~aV~~~L~~~Gi---~~~ri~~~G~G~~~ 180 (214)
T PRK09040 124 ILMVSGFTDDQPVRAGNRRFADNWELSAQRALTVTRALIDAGV---PASSVFAAAFGSEQ 180 (214)
T ss_pred eEEEEEEcCCCCccccccccccHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEeCCCC
Confidence 488999999987642 22 345666667888899988886 45567765555433
No 118
>PRK09041 motB flagellar motor protein MotB; Validated
Probab=20.61 E-value=2.5e+02 Score=25.67 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=36.7
Q ss_pred CEEEeeccCCCCCCCC-C-C--ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 43 QALLIGSHLDTVVDAG-I-F--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~g-~-~--D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
..|.+.||.|.+|... . + .-..+.+=+..+.++|.+.|+ .+.+-+......+..
T Consensus 192 ~~I~I~GHTD~~p~~~g~~~~sNweLS~aRA~aV~~~L~~~Gi--~~~ri~~~~G~gd~~ 249 (317)
T PRK09041 192 NRISLSGHTDATPYANGEKGYSNWELSADRANASRRELVAGGM--DEGKVLRVVGLASTM 249 (317)
T ss_pred CeEEEEEecCCCcccCCCccccHHHHHHHHHHHHHHHHHHcCC--ChhHeEEEEEeCCCC
Confidence 4699999999998643 2 2 235666667888999999887 544423566655544
No 119
>PRK12799 motB flagellar motor protein MotB; Reviewed
Probab=20.33 E-value=2.9e+02 Score=26.38 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=37.0
Q ss_pred CEEEeeccCCCCCCC-CC--Ccc-HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 43 QALLIGSHLDTVVDA-GI--FDG-SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~-g~--~D~-k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
..|.+.||.|.+|.. |. +++ ..+.+=+..+.++|.+.|+ .+.+-+.+....+..
T Consensus 187 n~I~I~GHTD~~P~~~g~~~~SNWeLSaaRA~aV~r~Li~~Gv--~~~ril~v~G~Gd~~ 244 (421)
T PRK12799 187 NKLSLSGHTDDLPYARGERGYSNWELSADRANASRRELLAGGL--DEGKILRVVGMASTM 244 (421)
T ss_pred CcEEEEEEcCCCcccCCCCCCCHHHHHHHHHHHHHHHHHHcCC--CcccEEEEEEeCCCC
Confidence 359999999999863 32 222 3455555778899999887 554445777776655
Done!