Query 023187
Match_columns 286
No_of_seqs 209 out of 1408
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 17:47:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023187.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023187hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n5f_A L-carbamoylase, N-carba 100.0 3E-44 1E-48 335.4 30.9 261 1-284 30-290 (408)
2 2v8h_A Beta-alanine synthase; 100.0 7.7E-41 2.6E-45 318.2 26.4 256 1-284 65-325 (474)
3 1z2l_A Allantoate amidohydrola 100.0 1.4E-40 4.9E-45 311.6 25.1 258 1-284 34-294 (423)
4 3ram_A HMRA protein; two-domai 100.0 2.1E-34 7.2E-39 267.8 16.4 210 1-284 31-247 (394)
5 3io1_A Aminobenzoyl-glutamate 100.0 3.3E-33 1.1E-37 263.6 22.7 211 1-284 29-306 (445)
6 3gb0_A Peptidase T; NP_980509. 100.0 5.6E-33 1.9E-37 255.9 18.8 208 1-284 21-255 (373)
7 1ysj_A Protein YXEP; M20 famil 100.0 1.8E-32 6.1E-37 255.5 21.9 217 1-284 47-282 (404)
8 1vgy_A Succinyl-diaminopimelat 100.0 4.6E-32 1.6E-36 251.6 24.5 221 1-285 21-266 (393)
9 3pfo_A Putative acetylornithin 100.0 2.4E-32 8.3E-37 256.4 22.2 221 1-285 41-305 (433)
10 2rb7_A Peptidase, M20/M25/M40 100.0 1.4E-32 4.9E-37 252.8 19.9 208 3-285 26-257 (364)
11 3ct9_A Acetylornithine deacety 100.0 4.4E-32 1.5E-36 248.8 21.5 210 1-285 26-255 (356)
12 3rza_A Tripeptidase; phosphory 100.0 1.8E-32 6.2E-37 254.7 18.1 207 1-284 39-275 (396)
13 1xmb_A IAA-amino acid hydrolas 100.0 5.6E-32 1.9E-36 253.2 20.3 217 1-283 43-275 (418)
14 1cg2_A Carboxypeptidase G2; me 100.0 2.4E-31 8.1E-36 246.8 22.9 206 5-284 41-270 (393)
15 3isz_A Succinyl-diaminopimelat 100.0 2.5E-31 8.6E-36 244.6 22.2 221 1-285 18-263 (377)
16 3tx8_A Succinyl-diaminopimelat 100.0 5.9E-32 2E-36 248.7 17.9 217 1-285 28-261 (369)
17 3ife_A Peptidase T; metallopep 100.0 5.5E-32 1.9E-36 254.4 15.6 205 2-284 53-311 (434)
18 2pok_A Peptidase, M20/M25/M40 100.0 8E-29 2.7E-33 235.7 21.0 232 5-285 66-363 (481)
19 2f7v_A Aectylcitrulline deacet 100.0 9.1E-29 3.1E-33 227.7 18.3 200 4-285 32-256 (369)
20 2zog_A Cytosolic non-specific 100.0 1.5E-28 5.3E-33 233.4 19.7 233 3-285 43-352 (479)
21 1fno_A Peptidase T; metallo pe 100.0 4.1E-28 1.4E-32 226.7 19.9 203 3-284 29-284 (417)
22 3dlj_A Beta-Ala-His dipeptidas 100.0 2.9E-27 1E-31 225.2 23.0 232 4-285 51-359 (485)
23 3mru_A Aminoacyl-histidine dip 100.0 7.5E-28 2.5E-32 229.6 18.4 205 1-283 29-276 (490)
24 2qyv_A XAA-His dipeptidase; YP 99.9 1.3E-26 4.5E-31 220.8 21.7 203 1-279 26-271 (487)
25 3pfe_A Succinyl-diaminopimelat 99.9 5.9E-27 2E-31 222.4 17.9 231 4-285 46-346 (472)
26 3khx_A Putative dipeptidase sa 99.9 7.6E-26 2.6E-30 215.8 19.5 244 3-285 63-378 (492)
27 1lfw_A PEPV; hydrolase, dipept 99.9 1.6E-24 5.4E-29 205.3 21.6 240 3-285 43-355 (470)
28 1q7l_A Aminoacylase-1; catalys 99.7 2.3E-17 7.9E-22 138.9 13.4 104 4-113 30-159 (198)
29 1tkj_A Aminopeptidase, SGAP; d 99.7 2.8E-17 9.5E-22 145.9 10.5 108 2-117 31-146 (284)
30 4h2k_A Succinyl-diaminopimelat 99.7 7.4E-17 2.5E-21 142.0 11.3 104 1-113 21-149 (269)
31 3t68_A Succinyl-diaminopimelat 99.7 8.3E-17 2.8E-21 141.6 9.2 104 1-113 21-149 (268)
32 3tc8_A Leucine aminopeptidase; 99.7 3.9E-16 1.3E-20 140.1 13.4 108 2-115 44-185 (309)
33 3gux_A Putative Zn-dependent e 99.7 4E-16 1.4E-20 140.2 12.4 108 2-115 46-188 (314)
34 1rtq_A Bacterial leucyl aminop 99.6 3.3E-16 1.1E-20 140.0 9.8 108 2-116 39-165 (299)
35 2afw_A Glutaminyl-peptide cycl 99.6 8.8E-16 3E-20 139.1 11.4 109 2-114 49-189 (329)
36 2fvg_A Endoglucanase; TM1049, 99.5 2.2E-15 7.4E-20 136.9 4.3 99 2-112 14-207 (340)
37 3pb6_X Glutaminyl-peptide cycl 99.5 2.7E-14 9.1E-19 129.0 10.8 107 2-114 57-193 (330)
38 2gre_A Deblocking aminopeptida 99.5 2.6E-14 8.7E-19 130.3 7.3 102 2-111 22-229 (349)
39 4fuu_A Leucine aminopeptidase; 99.5 2.8E-13 9.6E-18 121.5 13.3 93 2-100 44-162 (309)
40 4f9u_A CG32412; alpha/beta hyd 99.5 1.8E-13 6.1E-18 122.9 11.6 111 2-116 28-164 (312)
41 1vhe_A Aminopeptidase/glucanas 99.5 9.4E-14 3.2E-18 127.7 9.9 102 1-112 22-226 (373)
42 2wyr_A Cobalt-activated peptid 99.5 4.9E-14 1.7E-18 127.5 6.1 99 2-113 18-216 (332)
43 4fai_A CG5976, isoform B; alph 99.4 1.3E-12 4.4E-17 118.2 10.9 111 2-116 55-188 (330)
44 1y0y_A FRV operon protein FRVX 99.4 4.1E-13 1.4E-17 122.5 6.9 51 2-55 22-73 (353)
45 2ek8_A Aminopeptidase; metallo 99.3 2E-12 6.8E-17 120.8 9.1 101 8-117 173-287 (421)
46 2wzn_A TET3, 354AA long hypoth 99.3 1.8E-16 6.2E-21 141.2 -18.4 90 2-100 25-130 (354)
47 1vho_A Endoglucanase; structur 99.3 8E-12 2.7E-16 113.5 9.1 100 2-112 21-214 (346)
48 1ylo_A Hypothetical protein SF 99.3 9E-12 3.1E-16 113.1 9.0 100 2-112 19-211 (348)
49 3kl9_A PEPA, glutamyl aminopep 99.2 1.1E-11 3.8E-16 113.1 8.1 54 2-55 19-72 (355)
50 3iib_A Peptidase M28; YP_92679 99.2 1.7E-11 5.8E-16 115.2 7.3 83 28-117 235-318 (444)
51 3cpx_A Aminopeptidase, M42 fam 99.1 1.9E-11 6.4E-16 110.2 2.2 91 2-111 33-200 (321)
52 2vpu_A TET3, 354AA long hypoth 99.0 2.7E-10 9.2E-15 103.8 6.9 51 2-55 25-76 (354)
53 3fed_A Glutamate carboxypeptid 98.9 1.3E-09 4.3E-14 107.3 8.1 82 27-116 311-395 (707)
54 3isx_A Endoglucanase; TM1050, 98.9 3.1E-09 1.1E-13 96.2 7.8 51 2-55 27-77 (343)
55 3kas_A Transferrin receptor pr 98.8 4.5E-09 1.5E-13 102.4 7.9 81 28-116 266-350 (640)
56 3k9t_A Putative peptidase; str 97.1 0.001 3.5E-08 61.0 7.1 64 35-115 174-237 (435)
57 2ijz_A Probable M18-family ami 93.2 0.033 1.1E-06 51.5 2.2 53 2-54 15-85 (428)
58 1y7e_A Probable M18-family ami 92.3 0.083 2.8E-06 49.3 3.5 52 2-54 32-99 (458)
59 2glf_A Probable M18-family ami 89.7 0.41 1.4E-05 44.4 5.5 53 2-54 30-96 (450)
60 2glj_A Probable M18-family ami 80.0 0.29 1E-05 45.6 -0.6 52 3-54 35-105 (461)
61 3h8g_F Cytosol aminopeptidase; 65.7 49 0.0017 30.8 10.7 89 7-99 201-323 (497)
62 4efd_A Aminopeptidase; structu 62.6 43 0.0015 31.3 9.6 84 7-99 225-346 (522)
63 1gyt_A Cytosol aminopeptidase; 59.7 69 0.0024 29.9 10.6 89 7-99 202-326 (503)
64 3kzw_A Cytosol aminopeptidase; 57.7 30 0.001 32.4 7.7 88 7-99 218-339 (515)
65 3pei_A Cytosol aminopeptidase; 56.3 50 0.0017 30.7 8.9 88 7-99 185-307 (486)
66 1lam_A Leucine aminopeptidase; 55.3 94 0.0032 28.8 10.6 89 7-99 182-306 (484)
67 2hc9_A Leucine aminopeptidase 55.0 1.3E+02 0.0043 28.0 11.4 88 7-99 188-308 (491)
68 3jru_B Probable cytosol aminop 48.6 1.1E+02 0.0039 28.3 10.0 88 7-99 197-318 (490)
69 2glj_A Probable M18-family ami 47.5 9.2 0.00031 35.5 2.5 39 57-101 257-295 (461)
70 2zvy_A Chemotaxis protein MOTB 43.6 60 0.0021 25.7 6.6 52 44-98 92-148 (183)
71 2ek8_A Aminopeptidase; metallo 41.2 22 0.00074 32.2 4.0 26 2-27 34-59 (421)
72 2glf_A Probable M18-family ami 39.3 20 0.00069 33.0 3.4 38 57-101 245-282 (450)
73 3kr4_A M17 leucyl aminopeptida 38.4 2.5E+02 0.0086 26.2 10.7 89 8-99 227-350 (528)
74 3iib_A Peptidase M28; YP_92679 37.4 27 0.00091 31.9 4.0 26 2-27 41-67 (444)
75 3cyp_B Chemotaxis protein MOTB 34.7 94 0.0032 23.1 6.1 53 43-98 37-92 (138)
76 1y7e_A Probable M18-family ami 34.5 8 0.00027 35.8 -0.1 38 58-100 252-289 (458)
77 2zov_A Chemotaxis protein MOTB 33.2 84 0.0029 25.5 6.0 52 44-98 103-159 (210)
78 3khn_A MOTB protein, putative; 31.7 1.2E+02 0.0042 23.5 6.6 54 43-99 83-140 (174)
79 2ijz_A Probable M18-family ami 29.1 13 0.00046 34.0 0.4 48 57-116 231-278 (428)
80 3vat_A Dnpep, aspartyl aminope 27.9 30 0.001 32.3 2.6 43 57-100 281-325 (496)
81 2o8m_C Protease; NS3, NS4A, vi 27.6 55 0.0019 17.3 2.5 21 252-273 4-24 (26)
82 3s0y_A Motility protein B; pep 27.1 1.7E+02 0.0057 23.1 6.7 52 44-98 93-147 (193)
83 4eme_A M18 aspartyl aminopepti 25.9 1.4E+02 0.0048 28.3 6.7 52 2-53 20-90 (571)
84 3oon_A Outer membrane protein 25.1 1.1E+02 0.0036 22.1 4.8 53 43-98 49-101 (123)
85 3ij3_A Cytosol aminopeptidase; 22.7 3.9E+02 0.013 24.6 8.9 34 61-99 273-306 (482)
86 1x9z_A DNA mismatch repair pro 22.6 1.4E+02 0.0047 23.5 5.4 26 1-26 65-90 (188)
87 3lpe_A Putative transcription 22.6 67 0.0023 22.3 3.0 23 1-23 18-40 (92)
88 3vat_A Dnpep, aspartyl aminope 20.1 2.1E+02 0.007 26.6 6.6 52 2-53 49-118 (496)
No 1
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=3e-44 Score=335.37 Aligned_cols=261 Identities=39% Similarity=0.696 Sum_probs=228.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
+|++|.++++||+++|+++|++++.|..+|++++++|+.++.|+|+|.+|+|+||.+|.+|+|+|++++|++++.|++.+
T Consensus 30 ~s~~e~~~~~~l~~~l~~~g~~~~~d~~gnv~a~~~g~~~~~~~i~l~aH~D~v~~~g~~d~~~g~a~~l~~~~~l~~~~ 109 (408)
T 3n5f_A 30 FTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHG 109 (408)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCEEEECTTCCEEEEECCSSTTSCEEEEEEESCCCTTBCSSTTHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEcCCCCEEEEecCCCCCCCEEEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 48999999999999999999999999999999999886544699999999999999999999999999999999999988
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccce
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGY 160 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~ 160 (286)
. +++++|.|+|+++||+++|+.++.||+.+.+.++.+.++++|.+|+.+.+.|.+.|+.++. +.+...++..+.++
T Consensus 110 ~--~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~--~~~~~~~~~~~~~~ 185 (408)
T 3n5f_A 110 V--VTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDR--LPQAARKPGTVKAY 185 (408)
T ss_dssp C--CCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGG--GGGGCCCTTTEEEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhh--hhhcccCccCccEE
Confidence 6 7899999999999998878778999999998887776677888999999999999997652 11111223357789
Q ss_pred EEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCC
Q 023187 161 IEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRS 240 (286)
Q Consensus 161 ~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~ 240 (286)
+++|+++++++++.+.+.+++.+++|..+++|+++|+++|+|+.|++.|+|||.++++++.+|+++..+
T Consensus 186 ~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~~~----------- 254 (408)
T 3n5f_A 186 VELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----------- 254 (408)
T ss_dssp EEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHHHH-----------
T ss_pred EEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHHHh-----------
Confidence 999999998888777788999999999999999999999976899448999999999999999988632
Q ss_pred CccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 241 NCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
. ..+++++|.|++|+++.|+||++|++.+|+|+.+.
T Consensus 255 -------~-~~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~ 290 (408)
T 3n5f_A 255 -------T-GTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKA 290 (408)
T ss_dssp -------H-SSCEEEEEEEEEESCCTTEECSEEEEEEEEEESSH
T ss_pred -------c-CCcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCH
Confidence 2 26789999999987899999999999999998764
No 2
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=7.7e-41 Score=318.17 Aligned_cols=256 Identities=28% Similarity=0.410 Sum_probs=216.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
+|++|.++++||.++|+++|++++++..+|++++++|..+ .++|+|.||+||||.+|.+|||++++++|++++.|++.+
T Consensus 65 ~s~~e~~~~~~l~~~l~~~G~~v~~d~~gnvia~~~g~~~-~~~i~l~~H~DtVp~~g~~D~k~gvaa~L~a~~~L~~~~ 143 (474)
T 2v8h_A 65 GTALDGAMRDWFTNECESLGCKVKVDKIGNMFAVYPGKNG-GKPTATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKDNN 143 (474)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCEEEEBTTCCEEEEECCSSC-CSCEEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEecCceEEEEECCCCC-CCeEEEEEecccCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999888999999987543 468999999999999999999999999999999999988
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccc-hhcccC---CCCCcHHHHHHhCCCChhhHHhhhccCCCcc
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVS-ALRVSD---KSGVTVLDALRENSIDIAEESLLQLKYDPAS 156 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~-~~~~~~---~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~ 156 (286)
. +++++|.|+|+++||+++|+.++.|++.+...+..+ .++..| .+|+.+.+.|.+.|+.++.+. .+....
T Consensus 144 ~--~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~----~~~~e~ 217 (474)
T 2v8h_A 144 Y--VPNYDVCVVVWFNAEGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPA----SYKENE 217 (474)
T ss_dssp C--CCSSCEEEEECTTCSCSSSSCTTHHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCS----CTTTSC
T ss_pred C--CCCCCEEEEEECCccCCCCCCCcccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccc----cccccc
Confidence 7 789999999999999988877889999987654432 223445 688888888888888642111 122345
Q ss_pred ccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCcc
Q 023187 157 VWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAELIVLLERLCKHPKDFLS 235 (286)
Q Consensus 157 i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~-~g~nAi~~~a~~i~~l~~~~~~~~~~~~ 235 (286)
+.+++++|++|++.++..+...+++.+++|..+++|+++|+++|||..| + .|.|||.++++++..|+.+..+
T Consensus 218 ~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P-~~~g~nAi~~~a~~i~~l~~~~~~------ 290 (474)
T 2v8h_A 218 IDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTP-WRLRKDALLMSSKMIVAASEIAQR------ 290 (474)
T ss_dssp CSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCC-GGGCCCHHHHHHHHHHHHHHHHHH------
T ss_pred hhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCC-cccCCCHHHHHHHHHHHHHHHHhh------
Confidence 7789999999998877666677888899999999999999999965579 7 8999999999999999886542
Q ss_pred cCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 236 YDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
. .+++++|.|++||++.|+||++|++++|+|+.+.
T Consensus 291 ------------~--~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~ 325 (474)
T 2v8h_A 291 ------------H--NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSD 325 (474)
T ss_dssp ------------T--TCEEECCCEEEESCCTTEECSEEEEEEEEEESCH
T ss_pred ------------c--CCEEEEEEEEecCCCCceeCCEEEEEEEecCCCh
Confidence 1 4689999999998899999999999999999864
No 3
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=1.4e-40 Score=311.64 Aligned_cols=258 Identities=33% Similarity=0.504 Sum_probs=216.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~ 80 (286)
+|++|.++++||+++|+++|++++++..+|++++++|+.++.|+|+|.+|+|+||.+|.+|||++++++|++++.|++.+
T Consensus 34 ~s~~e~~~~~~i~~~l~~~G~~v~~~~~gnv~a~~~g~~~~~~~i~l~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~~ 113 (423)
T 1z2l_A 34 YSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQY 113 (423)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCEEEECTTSCEEEEECCSSEEEEEEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEecCCcEEEEEcCCCCCCCEEEEEEecCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999998889999999875433489999999999999999999999999999999999887
Q ss_pred CCCCCCcCEEEEEecCCCCccCCCCCcchhHhhccccc-chhcccCCCCCcHHHHHHhCCCCh-hhHHhhhccCCCcccc
Q 023187 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV-SALRVSDKSGVTVLDALRENSIDI-AEESLLQLKYDPASVW 158 (286)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~-~~~~~~~~~g~~~~~~l~~~g~~~-d~~~~~~~~~~~~~i~ 158 (286)
. +++++|.|+|+++||+++|+.++.|++.+...+.. ..++..+.++..+.+.+.+.|+.+ |. . ++..+.+.
T Consensus 114 ~--~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~----~-p~~~~~~~ 186 (423)
T 1z2l_A 114 G--APLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNA----P-LTPRQDIK 186 (423)
T ss_dssp C--SCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSS----C-CCCCCCEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccc----c-ccCCCCce
Confidence 6 78999999999999987777678899999876653 334556788999988888898852 10 0 00012466
Q ss_pred ceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCcccC
Q 023187 159 GYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAELIVLLERLCKHPKDFLSYD 237 (286)
Q Consensus 159 ~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~-~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~ 237 (286)
+++++|++|++++++++...+++.+++|..+++|+++|+++||++.| + .|.|||.++++++..|+++..+.
T Consensus 187 ~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P-~~~g~nAi~~~a~~i~~l~~~~~~~------- 258 (423)
T 1z2l_A 187 AFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTP-MGYRRDTVYAFSRICHQSVEKAKRM------- 258 (423)
T ss_dssp EEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSC-GGGCCCHHHHHHHHHHHHHHHHHHH-------
T ss_pred EEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCc-cccCcCHHHHHHHHHHHHHHHHHhc-------
Confidence 88899999987777666667888899999999999999999975589 6 89999999999999999876431
Q ss_pred CCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 238 GRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
.+.+++++|.|++|+++.|+||++|++.+|+|+.+.
T Consensus 259 -----------~~~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~ 294 (423)
T 1z2l_A 259 -----------GDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDA 294 (423)
T ss_dssp -----------CTTCEEECCCEEEESCCTTEECCEEEEEEEEEESSH
T ss_pred -----------CCCceEEEEEEeecCCcceeECCEEEEEEEeeCCCH
Confidence 135689999999987899999999999999999864
No 4
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=2.1e-34 Score=267.80 Aligned_cols=210 Identities=12% Similarity=0.038 Sum_probs=167.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccc---cEEEEEcCCCCCCCEEEeeccCCCCC---CCCCCccHHHHHHHHHHHH
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG---NVHGRVEGLNASAQALLIGSHLDTVV---DAGIFDGSLGIITAISALK 74 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~---nv~a~~~g~~~~~~~l~~~~H~DtV~---~~g~~D~k~gv~a~l~a~~ 74 (286)
+|++|.++++||+++|+++|++++.+..+ |++++++|.. ..|+|+|.+|||+|| |+|++|++++++ |.+++
T Consensus 31 ~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~-~g~~i~l~ah~D~vpg~~ha~G~d~~~a~~--l~aa~ 107 (394)
T 3ram_A 31 LGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGL-DGPAIGFLAEYDALPGLGHACGHNIIGTAS--VLGAI 107 (394)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSS-SSCEEEEEECCCCCTTTSSTTCHHHHHHHH--HHHHH
T ss_pred CCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCC-CCCEEEEEEecccCCCcceECCccHHHHHH--HHHHH
Confidence 58899999999999999999999876554 8999998754 359999999999999 678999998755 88888
Q ss_pred HHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchh-HhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCC
Q 023187 75 VLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSA-ALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYD 153 (286)
Q Consensus 75 ~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~-~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~ 153 (286)
.|++.+. .++++|.|+|+++||++. +.|++ .+. +.|+.
T Consensus 108 ~L~~~~~--~~~g~v~~~f~~~EE~~~----~~Ga~~~~~-----------------------~~g~~------------ 146 (394)
T 3ram_A 108 GLKQVID--QIGGKVVVLGCPAEEGGE----NGSAKASYV-----------------------KAGVI------------ 146 (394)
T ss_dssp HHHTTHH--HHCSEEEEEECCCTTCCT----TCCHHHHHH-----------------------HHTGG------------
T ss_pred HHHHhHh--hCCceEEEEEECCccCCC----CCchHHHHH-----------------------HcCCc------------
Confidence 8987654 688999999999999741 24887 542 22321
Q ss_pred CccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCC
Q 023187 154 PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDF 233 (286)
Q Consensus 154 ~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~ 233 (286)
+.+++++.+|++++. ..+ .+++|..+++|+++|+++|++++| +.|+|||.++++++..|+.+....
T Consensus 147 -~~~d~~~~~h~~~~~-------~~~--~~~~g~~~~~i~v~Gk~~Ha~~~P-~~g~nAi~~a~~~i~~l~~l~~~~--- 212 (394)
T 3ram_A 147 -DQIDIALMIHPGNET-------YKT--IDTLAVDVLDVKFYGKSAHASENA-DEALNALDAMISYFNGVAQLRQHI--- 212 (394)
T ss_dssp -GGCSEEECCEEESSB-------BCC--CCBCEEEEEEEEEECBCCBHHHHG-GGCBCHHHHHHHHHHHHHHHGGGS---
T ss_pred -ccCCEEEEECCcccc-------CCC--ccccceeEEEEEEEccccccCCCC-cCCCCHHHHHHHHHHHHHHHHhhC---
Confidence 123455668876542 122 358999999999999999954399 899999999999999999885431
Q ss_pred cccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 234 LSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
...++++++.+++| ++.||||++|++++|+|+.+.
T Consensus 213 ---------------~~~~~~~~~~i~gG-~~~NvIP~~a~~~~~iR~~~~ 247 (394)
T 3ram_A 213 ---------------KKDQRVHGVILDGG-KAANIIPDYTHARFYTRAMTR 247 (394)
T ss_dssp ---------------CTTCEEEEEEEEBC-SCTTBCCSEEEEEEEEEESSH
T ss_pred ---------------CCCCeeEEEEEECC-CCCceeCCeEEEEEEEeeCCH
Confidence 12356778888888 999999999999999999864
No 5
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=3.3e-33 Score=263.62 Aligned_cols=211 Identities=21% Similarity=0.269 Sum_probs=164.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc----------------------------------------ccccEEEEEcCCCC
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVD----------------------------------------HLGNVHGRVEGLNA 40 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~----------------------------------------~~~nv~a~~~g~~~ 40 (286)
+|++|.++++||+++|+++|++++.. ...|++|+++|+.
T Consensus 29 ~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vva~~~~~~- 107 (445)
T 3io1_A 29 SGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGR- 107 (445)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTTGGGGTTTCCCEEEEEECSS-
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccccccccccccccCCCCEEEEEEeCCC-
Confidence 57899999999999999999998874 2368999998754
Q ss_pred CCCEEEeeccCCCCCC------------------------CCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecC
Q 023187 41 SAQALLIGSHLDTVVD------------------------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSD 96 (286)
Q Consensus 41 ~~~~l~~~~H~DtV~~------------------------~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~d 96 (286)
..|+|+|.+|||+||. +|++|++ ++++|++++.|++.+. +++++|.|+|++|
T Consensus 108 ~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~--~a~~l~aa~~L~~~~~--~~~g~v~l~f~p~ 183 (445)
T 3io1_A 108 PGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGH--TAIGLGLAHVLKQYAA--QLNGVIKLIFQPA 183 (445)
T ss_dssp CCCEEEEEEECCCCCC-------------------------CTTCTH--HHHHHHHHHHHHHTGG--GCCSEEEEEEESC
T ss_pred CCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHH--HHHHHHHHHHHHhCcC--cCCceEEEEEecc
Confidence 3599999999999993 2566654 5556999999998775 7899999999999
Q ss_pred CCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCc
Q 023187 97 EEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGF 176 (286)
Q Consensus 97 EE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~ 176 (286)
||+++ |++.+. +.|+. +.+++++.+|+.++.. .+
T Consensus 184 EE~~~------Ga~~~i-----------------------~~g~~-------------~~~d~~~~~h~~~~~~---~g- 217 (445)
T 3io1_A 184 EEGTR------GARAMV-----------------------AAGVV-------------DDVDYFTAIHIGTGVP---AG- 217 (445)
T ss_dssp TTTTC------HHHHHH-----------------------HTTTT-------------TTCSEEEEEEEEEEEE---TT-
T ss_pred ccccc------hHHHHH-----------------------HcCCc-------------cccceeEEEeccCCCC---CC-
Confidence 99643 887653 23331 1233455577643221 11
Q ss_pred ccceEeceec---ceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeE
Q 023187 177 PLGVVQGIAG---QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLV 253 (286)
Q Consensus 177 ~~~vv~~~~G---~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (286)
.+..+++| ..+++|+++|+++|||++| +.|+|||.++++++..|+.+... ..+.++
T Consensus 218 --~i~~~~~g~~a~~~~~i~v~Gk~~HaGs~P-~~g~nAi~~aa~~i~~l~~l~~~------------------~~~~~~ 276 (445)
T 3io1_A 218 --TVVCGGDNFMATTKFDVQFSGVAAHAGGKP-EDGRNALLAAAQAALGLHAIPPH------------------SAGASR 276 (445)
T ss_dssp --BEESCCCCBCEEEEEEEEEECCCSSTTCCG-GGCCCHHHHHHHHHHHHHTCCCB------------------TTBCEE
T ss_pred --eEEEecCCeeEEEEEEEEEEeecCCCCCCC-cCCcCHHHHHHHHHHHHHHHHhh------------------cCCCeE
Confidence 12333444 4799999999999977999 99999999999999999986321 124578
Q ss_pred EEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 254 CTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 254 ~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
+++|.|++| ++.||||++|++++|+|+.+.
T Consensus 277 ~~vg~i~gG-~~~NvIP~~a~~~~~iR~~~~ 306 (445)
T 3io1_A 277 VNVGVMQAG-TGRNVVPSSALLKVETRGESE 306 (445)
T ss_dssp EEEEEEEEC-SCTTSCCCEEEEEEEEEESSH
T ss_pred EEEEEEecC-CCCceeCCeEEEEEEEecCCH
Confidence 999999999 999999999999999999864
No 6
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=5.6e-33 Score=255.93 Aligned_cols=208 Identities=20% Similarity=0.300 Sum_probs=166.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEccc--------ccEEEEEcCCCCCCCEEEeeccCCCCCCCC--------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHL--------GNVHGRVEGLNASAQALLIGSHLDTVVDAG-------------- 58 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~--------~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g-------------- 58 (286)
+|++|.++++||+++|+++|++++.+.. +|++++++|+.++.|+|+|.+|||+||.++
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~ 100 (373)
T 3gb0_A 21 ETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSD 100 (373)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSCSSCCCEEETTEEECC
T ss_pred CCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCCCCcCcEEECCEEECC
Confidence 4788999999999999999999998763 799999987533568999999999998542
Q ss_pred CC-----ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHH
Q 023187 59 IF-----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLD 133 (286)
Q Consensus 59 ~~-----D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~ 133 (286)
++ |||++++++|++++.|++.+. ++++|.|+|+++||.+ +.|++.+..
T Consensus 101 G~~~~g~D~k~g~a~~l~a~~~l~~~~~---~~~~v~~~~~~~EE~g-----~~Ga~~~~~------------------- 153 (373)
T 3gb0_A 101 GTTILGADDKAGLASMFEAIRVLKEKNI---PHGTIEFIITVGEESG-----LVGAKALDR------------------- 153 (373)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHTTC---CCCCEEEEEESCGGGT-----SHHHHHSCG-------------------
T ss_pred CccccCcccHHHHHHHHHHHHHHHhcCC---CCCCEEEEEEeccccC-----chhhhhhCH-------------------
Confidence 33 999999999999999998874 6799999999999973 347775421
Q ss_pred HHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHH
Q 023187 134 ALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPM 213 (286)
Q Consensus 134 ~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi 213 (286)
.++. ...+ +|.+++. ....++.+.+|..+++|+++|+++|++..| +.|+|||
T Consensus 154 ----~~~~--------------~~~~---~~~~~~~------~~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p-~~g~nai 205 (373)
T 3gb0_A 154 ----ERIT--------------AKYG---YALDSDG------KVGEIVVAAPTQAKVNAIIRGKTAHAGVAP-EKGVSAI 205 (373)
T ss_dssp ----GGCC--------------CSEE---EEEEECS------CTTEEEEEECEEEEEEEEEECBCCBTTTCG-GGSBCHH
T ss_pred ----HhcC--------------CCEE---EEEcCCC------CCCeEEEcCCCcEEEEEEEEeEecCCCCCh-hhCcCHH
Confidence 0111 1122 5655532 123466778999999999999999964489 9999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 214 TAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 214 ~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
.++++++..|+.. + ..+..++++|.|++| ++.|+||++|++.+|+|+.+.
T Consensus 206 ~~~~~~i~~l~~~--~------------------~~~~~~~~vg~i~gG-~~~Nvip~~~~~~~d~R~~~~ 255 (373)
T 3gb0_A 206 TIAAKAIAKMPLG--R------------------IDSETTANIGRFEGG-TQTNIVCDHVQIFAEARSLIN 255 (373)
T ss_dssp HHHHHHHTTSCCE--E------------------EETTEEEEEEEEEEC-SCTTBCCCEEEEEEEEEESSH
T ss_pred HHHHHHHHhcccc--c------------------CCCccccceeEEecC-cccccccceEEEEEEEecCCH
Confidence 9999999876531 1 124578899999999 999999999999999998764
No 7
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.8e-32 Score=255.47 Aligned_cols=217 Identities=21% Similarity=0.326 Sum_probs=158.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccc--cEEEEEcCCCCCCCEEEeeccCCCCCCC------------C---CCccH
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG--NVHGRVEGLNASAQALLIGSHLDTVVDA------------G---IFDGS 63 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~--nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------g---~~D~k 63 (286)
+|++|.++++||+++|+++|++++.+..+ |++++++|.. ..|+|+|.+|+||||.+ | +.++|
T Consensus 47 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~-~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~k 125 (404)
T 1ysj_A 47 LSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGRE-DGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHD 125 (404)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSS-CCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHH
T ss_pred CCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCC-CCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcCh
Confidence 47789999999999999999999776655 9999998753 35899999999999964 2 13467
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChh
Q 023187 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (286)
Q Consensus 64 ~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d 143 (286)
++++++|++++.|++.+. .++++|.|+|+++||+. .|++.+.. .|+.
T Consensus 126 g~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~------~G~~~~~~-----------------------~g~~-- 172 (404)
T 1ysj_A 126 FHTASIIGTAMLLNQRRA--ELKGTVRFIFQPAEEIA------AGARKVLE-----------------------AGVL-- 172 (404)
T ss_dssp HHHHHHHHHHHHHHTCGG--GCSSEEEEEEESCTTTT------CHHHHHHH-----------------------TTTT--
T ss_pred HHHHHHHHHHHHHHhccc--cCCceEEEEEecccccc------hhHHHHHh-----------------------cCCC--
Confidence 899999999999998765 68899999999999982 38886531 2221
Q ss_pred hHHhhhccCCCccccceEEeeccCCcccccCCcccceEec--eecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHH
Q 023187 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQG--IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (286)
Q Consensus 144 ~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~--~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~ 221 (286)
+.+++++.+|+||+...+ .+.+..+ ++|..+++|+++|+++|| +.| +.|.|||.++++++.
T Consensus 173 -----------~~~d~~i~~h~ep~~~~g----~v~~~~g~~~~g~~~~~i~v~G~~~Ha-s~P-~~g~nAi~~~~~~i~ 235 (404)
T 1ysj_A 173 -----------NGVSAIFGMHNKPDLPVG----TIGVKEGPLMASVDRFEIVIKGKGGHA-SIP-NNSIDPIAAAGQIIS 235 (404)
T ss_dssp -----------TTEEEEEEEEEETTSCTT----EEEECSEEEECCEEEEEEEEECC----------CCCCHHHHHHHHHH
T ss_pred -----------cCCCEEEEEecCCCCCCc----eEEeccChhhcccceEEEEEEccCccc-cCc-ccCCCHHHHHHHHHH
Confidence 113355668888753211 1111223 689999999999999995 799 999999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
+|+++..+.. ++. ..+++++|.|++| ++.|+||++|++++|+|+.+.
T Consensus 236 ~l~~~~~~~~--------------~~~-~~~~~~vg~i~gG-~~~NvIP~~a~~~~diR~~~~ 282 (404)
T 1ysj_A 236 GLQSVVSRNI--------------SSL-QNAVVSITRVQAG-TSWNVIPDQAEMEGTVRTFQK 282 (404)
T ss_dssp HHC--------------------------CCEEEEEEEEEC-SCSSSCCSEEEEEEEEECSSH
T ss_pred HHHHHHhhhc--------------CCC-CCcEEEEEEEEcC-CCCceecCceEEEEEEecCCH
Confidence 9987643311 122 3578999999998 999999999999999999864
No 8
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=4.6e-32 Score=251.61 Aligned_cols=221 Identities=21% Similarity=0.245 Sum_probs=168.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE---cccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~---~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------------- 57 (286)
+|++|.++++||+++|+++|++++. +..+|+++++ |. +.|+|+|.+|+||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~ 97 (393)
T 1vgy_A 21 VTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRR-GT--KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLY 97 (393)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEE-CC--CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEE
Confidence 3678889999999999999999887 4568999998 64 35899999999999864
Q ss_pred -CC-CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHH
Q 023187 58 -GI-FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (286)
Q Consensus 58 -g~-~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l 135 (286)
++ .|||++++++|++++.|++.+. +++++|.|+|+++||+++ +.|++.+.. .+
T Consensus 98 grG~~D~k~~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~~----~~Ga~~~~~-------------------~~ 152 (393)
T 1vgy_A 98 GRGAADMKTSIACFVTACERFVAKHP--NHQGSIALLITSDEEGDA----LDGTTKVVD-------------------VL 152 (393)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----TTSHHHHHH-------------------HH
T ss_pred ecCcccchHHHHHHHHHHHHHHHhcC--CCCCcEEEEEEeccccCC----cCCHHHHHH-------------------HH
Confidence 23 3999999999999999998776 789999999999999742 348886532 22
Q ss_pred HhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 023187 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (286)
Q Consensus 136 ~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~ 215 (286)
...+..+| +. +..+++.... .+. .+..+++|..+++|+++|+++|| +.| +.|.|||.+
T Consensus 153 ~~~~~~~d---------------~~--i~~e~~~~~~-~g~--~i~~g~~G~~~~~i~v~G~~~Ha-~~P-~~g~nAi~~ 210 (393)
T 1vgy_A 153 KARDELID---------------YC--IVGEPTAVDK-LGD--MIKNGRRGSLSGNLTVKGKQGHI-AYP-HLAINPVHT 210 (393)
T ss_dssp HHTTCCEE---------------EE--EECCCCBSSS-TTS--EEECEECEEEEEEEEEECBCEET-TCG-GGCBCHHHH
T ss_pred HhcCcCCC---------------EE--EEeCCCCccc-CCc--eeEEeeeeEEEEEEEEEccCccc-CCC-ccCCCHHHH
Confidence 22333221 11 2224432110 111 14467899999999999999995 689 999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 216 ~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++++.+|+.+..... .+...+++++++.|++|+.+.|+||++|++++|+|+++.+
T Consensus 211 ~a~~i~~l~~~~~~~~--------------~~~~~~~~~~v~~i~gG~~~~NviP~~a~~~~diR~~~~~ 266 (393)
T 1vgy_A 211 FAPALLELTQEVWDEG--------------NEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTES 266 (393)
T ss_dssp HHHHHHHHHHCCCCCC--------------CSSCCCCEEEEEEEEECCSCTTEECSEEEEEEEEEECTTS
T ss_pred HHHHHHHhhccccccc--------------ccccCCCeEEEeeEcCCCCCCcccCCeEEEEEEEecCCCC
Confidence 9999999987542210 0112457899999999944899999999999999998764
No 9
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.4e-32 Score=256.36 Aligned_cols=221 Identities=16% Similarity=0.174 Sum_probs=169.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE----------------------cccccEEEEEcCCCCCCCEEEeeccCCCCCCC-
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWV----------------------DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~----------------------~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~- 57 (286)
+|++|.++++||+++|+++|++++. +..+|++++++|. ...|+|+|.+|||+||.+
T Consensus 41 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~-~~~~~v~l~aH~D~vp~~~ 119 (433)
T 3pfo_A 41 VRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSD-GKGRSLILQGHIDVVPEGP 119 (433)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCC-CCSCCEEEEEECCBCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecC-CCCCEEEEEcccCCcCCCC
Confidence 4788999999999999999999865 2347899999874 346899999999999864
Q ss_pred ---------------------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhccc
Q 023187 58 ---------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (286)
Q Consensus 58 ---------------------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~ 116 (286)
|..|||++++++|++++.|++.+. +++++|.|+|+++||.++ .|++.+.
T Consensus 120 ~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~-----~G~~~~~--- 189 (433)
T 3pfo_A 120 VDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGY--APDARVHVQTVTEEESTG-----NGALSTL--- 189 (433)
T ss_dssp GGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTE--EESSCEEEEEESCTTTTC-----HHHHHHH---
T ss_pred cccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCC--CCCccEEEEEEecCccCC-----hhHHHHH---
Confidence 567999999999999999999876 688999999999999742 3666432
Q ss_pred ccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEe
Q 023187 117 PVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG 196 (286)
Q Consensus 117 ~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G 196 (286)
+.|+.+| . + +..+|+ . ..++.+++|..+++|+++|
T Consensus 190 --------------------~~~~~~d------------~--~---i~~ep~------~--~~i~~~~~G~~~~~i~v~G 224 (433)
T 3pfo_A 190 --------------------MRGYRAD------------A--C---LIPEPT------G--HTLTRAQVGAVWFRLRVRG 224 (433)
T ss_dssp --------------------HTTCCCS------------E--E---EECCCC------S--SCEEEEECEEEEEEEEEEC
T ss_pred --------------------hcCCCCC------------E--E---EEeCCC------C--CceEEecceEEEEEEEEEc
Confidence 2333221 1 1 333442 1 2567789999999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEE
Q 023187 197 SQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVT 276 (286)
Q Consensus 197 ~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~ 276 (286)
+++|| +.| +.|.|||.++++++..|+++..+.......+ ..+.....+.++++|.|++| ++.|+||++|++.
T Consensus 225 ~~~Ha-~~p-~~g~nAi~~~~~~i~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~vg~i~gG-~~~NvIP~~a~~~ 296 (433)
T 3pfo_A 225 TPVHV-AYS-ETGTSAILSAMHLIRAFEEYTKELNAQAVRD-----PWFGQVKNPIKFNVGIIKGG-DWASSTAAWCELD 296 (433)
T ss_dssp CCCBG-GGG-GGSCCHHHHHHHHHHHHHHHHHHHHHHGGGC-----TTTTTSSSCSCEEEEEEEEC-SCTTBCCCEEEEE
T ss_pred CCCcc-CCC-CcCcCHHHHHHHHHHHHHHHHHHhhhccccC-----ccccccCCCceEEeeeEECC-CCCcccCcEEEEE
Confidence 99995 699 9999999999999999998754210000000 00000123568999999999 9999999999999
Q ss_pred EEEecCCCC
Q 023187 277 GYIHCGFTS 285 (286)
Q Consensus 277 ~diR~~~~~ 285 (286)
+|+|+.+.+
T Consensus 297 ~~iR~~~~~ 305 (433)
T 3pfo_A 297 CRLGLLTGD 305 (433)
T ss_dssp EEEEECTTC
T ss_pred EEEecCCCC
Confidence 999998764
No 10
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=1.4e-32 Score=252.77 Aligned_cols=208 Identities=17% Similarity=0.160 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCC-CCCCCEEEeeccCCCCCC----------C-----CC-CccHHH
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGL-NASAQALLIGSHLDTVVD----------A-----GI-FDGSLG 65 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~-~~~~~~l~~~~H~DtV~~----------~-----g~-~D~k~g 65 (286)
++|.++++||+++|+++|++++.+. +|+++.++|. ....|+|+|.+|+|+||. + ++ .|||++
T Consensus 26 ~~e~~~~~~l~~~l~~~G~~~~~~~-~~~~~~~~~~~~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~ 104 (364)
T 2rb7_A 26 EQISRCAGFIMDWCAQNGIHAERMD-HDGIPSVMVLPEKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYA 104 (364)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEE-ETTEEEEEECSBTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHH
T ss_pred chHHHHHHHHHHHHHHcCCeEEEec-CCCceEEEEEcCCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHH
Confidence 7899999999999999999987764 7899988752 124589999999999985 2 34 499999
Q ss_pred HHHHHHHHHHHHHcCCCCCC---CcC--EEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCC
Q 023187 66 IITAISALKVLKSTGKLGKL---KRP--VEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (286)
Q Consensus 66 v~a~l~a~~~L~~~~~~~~~---~~~--i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~ 140 (286)
++++|++++.|++.+. ++ +++ |.|+|+++||.+ ++.|++.+... +
T Consensus 105 ~a~~l~a~~~l~~~~~--~~~~~~g~~~v~~~~~~~EE~~----g~~G~~~~~~~-----------------------~- 154 (364)
T 2rb7_A 105 VALGLVMFRDRLNALK--AAGRSQKDMALGLLITGDEEIG----GMNGAAKALPL-----------------------I- 154 (364)
T ss_dssp HHHHHHHHHHHHHHHH--HTTCCGGGCCEEEEEESCGGGT----STTTHHHHGGG-----------------------C-
T ss_pred HHHHHHHHHHHHHhCC--CCcccCCCccEEEEEEeccccC----chhhHHHHHhc-----------------------C-
Confidence 9999999999998765 55 568 999999999963 24588765421 1
Q ss_pred ChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 023187 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (286)
Q Consensus 141 ~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i 220 (286)
.+ + ++ +|++++.+ .+++++++|..+++|+++|+++|| +.| +.|.|||.++++++
T Consensus 155 ~~------------d--~~---i~~d~~~p-------~~i~~~~~G~~~~~i~v~G~~~Ha-~~P-~~g~nAi~~~~~~i 208 (364)
T 2rb7_A 155 RA------------D--YV---VALDGGNP-------QQVITKEKGIIDIKLTCTGKAAHG-ARP-WMGVNAVDLLMEDY 208 (364)
T ss_dssp EE------------E--EE---EECSSSBT-------TEEEEEECEEEEEEEEEECBCEET-TSG-GGSBCHHHHHHHHH
T ss_pred CC------------C--EE---EEccCCcc-------cceEEEeeeEEEEEEEEEeecccC-CCC-CCCcCHHHHHHHHH
Confidence 11 1 12 66554321 226778999999999999999995 679 89999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCccccccCC--CCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 221 VLLERLCKHPKDFLSYDGRSNCSTLESLS--SSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
..|+++... +.. +.++++++.|++| ++.|+||++|++++|+|+.+.+
T Consensus 209 ~~l~~~~~~-----------------~~~~~~~~~~~vg~i~gG-~~~NviP~~a~~~~~iR~~~~~ 257 (364)
T 2rb7_A 209 TRLKTLFAE-----------------ENEDHWHRTVNLGRIRAG-ESTNKVPDVAEGWFNIRVTEHD 257 (364)
T ss_dssp HHHHTTSCC-----------------CCTTCCSCEEEEEEEEEC-SCTTEECSEEEEEEEEEECTTS
T ss_pred HHHHhhccc-----------------hhhcCCCceEEEEEEecC-CcCcccCcceEEEEEEeeCCCC
Confidence 999876221 122 3579999999999 9999999999999999998764
No 11
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=4.4e-32 Score=248.84 Aligned_cols=210 Identities=18% Similarity=0.161 Sum_probs=167.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC-------------------CCC-
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------GIF- 60 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------------g~~- 60 (286)
+|++|.++++||+++|+++|++++.+ .+|++++++|+..+.|+|+|.+|+|+||.+ +++
T Consensus 26 ~s~~e~~~~~~l~~~l~~~g~~~~~~-~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~ 104 (356)
T 3ct9_A 26 ISREETQAADFLQNYIEAEGMQTGRK-GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSN 104 (356)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCCEEEE-TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTT
T ss_pred CCCChHHHHHHHHHHHHHCCCeEEEE-eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcc
Confidence 36789999999999999999999887 789999998733346899999999999863 233
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCC
Q 023187 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~ 140 (286)
|||++++++|++++.|++.+ ++++|.|+|+++||.+ ++.|++.+... +.
T Consensus 105 D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~~----g~~G~~~~~~~-----------------------~~ 153 (356)
T 3ct9_A 105 DAGASVVSLLQVFLQLCRTS----QNYNLIYLASCEEEVS----GKEGIESVLPG-----------------------LP 153 (356)
T ss_dssp TTHHHHHHHHHHHHHHTTSC----CSSEEEEEEECCGGGT----CTTTHHHHGGG-----------------------SC
T ss_pred cchHHHHHHHHHHHHHHhcC----CCCCEEEEEEeCcccC----CccCHHHHHhh-----------------------CC
Confidence 99999999999999998864 6789999999999972 23588876421 11
Q ss_pred ChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 023187 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (286)
Q Consensus 141 ~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i 220 (286)
. ++ ++ ++.+|+. ..++.+++|..+++|+++|+++|| +.| .|.|||.++++++
T Consensus 154 ~------------~d--~~---i~~ep~~--------~~i~~~~~G~~~~~i~~~G~~~Ha-~~p--~g~nAi~~~~~~i 205 (356)
T 3ct9_A 154 P------------VS--FA---IVGEPTE--------MQPAIAEKGLMVLDVTATGKAGHA-ARD--EGDNAIYKVLNDI 205 (356)
T ss_dssp C------------CS--EE---EECCSBT--------TCCEEEECCCEEEEEEEECBCCBT-TSS--CCBCTTGGGHHHH
T ss_pred C------------CC--EE---EEcCCCC--------ceEEEeeeEEEEEEEEEECCCccc-CCC--CCCCHHHHHHHHH
Confidence 1 11 12 6666541 235567999999999999999994 678 7999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
.+|+.+..+.. ++..+.+++++|.|++| ++.|+||++|++++|+|+.+.+
T Consensus 206 ~~l~~~~~~~~--------------~~~~~~~~~~vg~i~gG-~~~NviP~~a~~~~~iR~~~~~ 255 (356)
T 3ct9_A 206 AWFRDYRFEKE--------------SPLLGPVKMSVTVINAG-TQHNVVPDKCTFVVDIRSNELY 255 (356)
T ss_dssp HHHHHCCCSCC--------------BTTTBSCEEEEEEEEEC-SSTTBCCSEEEEEEEEECCTTC
T ss_pred HHHHhhhcccc--------------cccCCCCcEEeeEEecC-CcCCcCCCceEEEEEEeeCCCC
Confidence 99998654321 12224679999999999 9999999999999999998765
No 12
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-32 Score=254.69 Aligned_cols=207 Identities=19% Similarity=0.259 Sum_probs=165.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcc--------cccEEEEEcCC--CCCCCEEEeeccCCCCCCC-------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGL--NASAQALLIGSHLDTVVDA------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~--------~~nv~a~~~g~--~~~~~~l~~~~H~DtV~~~------------- 57 (286)
+|++|.++++||+++|+++|++++.+. .+|++++++|+ .++.|+|+|.+|||+||.+
T Consensus 39 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~ 118 (396)
T 3rza_A 39 ETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYI 118 (396)
T ss_dssp BTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEE
T ss_pred CCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEE
Confidence 478899999999999999999999875 47999999875 2346899999999999853
Q ss_pred --CCC-----ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCc
Q 023187 58 --GIF-----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (286)
Q Consensus 58 --g~~-----D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~ 130 (286)
+++ |||++++++|++++.|++.+. ++++|.|+|+++||.+ +.|++.+..
T Consensus 119 ~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~---~~~~v~~~~~~~EE~g-----~~Ga~~~~~---------------- 174 (396)
T 3rza_A 119 YSDGTTILGADDKAGLAAMLEVLQVIKEQQI---PHGQIQFVITVGEESG-----LIGAKELNS---------------- 174 (396)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC---CCCCEEEEEESCGGGT-----SHHHHHCCG----------------
T ss_pred ECCCccccCcccHHHHHHHHHHHHHHHhcCC---CCCCEEEEEEcccccc-----cHhHhhhch----------------
Confidence 333 999999999999999998874 6799999999999973 347775421
Q ss_pred HHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCC
Q 023187 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQ 210 (286)
Q Consensus 131 ~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~ 210 (286)
.++. ..++ +|++++.. ...++++.+|..+++|+++|+++|| +.| +.|+
T Consensus 175 -------~~~~--------------~~~~---~~~~~~~~------~g~i~~~~~g~~~~~i~v~G~~~Ha-~~p-~~g~ 222 (396)
T 3rza_A 175 -------ELLD--------------ADFG---YAIDASAD------VGTTVVGAPTQMLISAKIIGKTAHA-STP-KEGV 222 (396)
T ss_dssp -------GGCC--------------CSEE---EEEEESSC------TTCEEEEECEEEEEEEEEECBCCBT-TSG-GGSB
T ss_pred -------hhcc--------------cceE---EEEecCCC------cceEEEcCCceEEEEEEEEeEecCC-CCc-cccc
Confidence 1111 1122 56665421 2346678899999999999999995 599 8999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 211 DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 211 nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
|||.++++++..|+... ..+..++++|.|++| ++.|+||++|++.+|+|+.+.
T Consensus 223 nai~~~~~~i~~l~~~~--------------------~~~~~~~~vg~i~gG-~~~NvIP~~a~~~~diR~~~~ 275 (396)
T 3rza_A 223 SAINIAAKAISRMKLGQ--------------------VDEITTANIGKFHGG-SATNIVADEVILEAEARSHDP 275 (396)
T ss_dssp CHHHHHHHHHHHSCCEE--------------------EETTEEEEEEEEEEC-SCTTBCCCEEEEEEEEEESSH
T ss_pred cHHHHHHHHHHhcccCC--------------------CCCCceeeeeEEecC-CCCcccCceEEEEEEEEeCCH
Confidence 99999999998876411 124578999999999 999999999999999998764
No 13
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=5.6e-32 Score=253.20 Aligned_cols=217 Identities=21% Similarity=0.281 Sum_probs=153.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcc-cccEEEEEcCCCCCCCEEEeeccCCCCCCC------------CC---CccHH
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------GI---FDGSL 64 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~-~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------g~---~D~k~ 64 (286)
+|++|.++++||+++|+++|++++.+. .+|++++++|+. . |+|+|.+|+|+||.+ |. .++|+
T Consensus 43 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~-~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~ 120 (418)
T 1xmb_A 43 LGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGE-P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 120 (418)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSS-S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHH
T ss_pred CCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCC-C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchH
Confidence 478899999999999999999998764 688999998753 3 899999999999964 21 23468
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChhh
Q 023187 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (286)
Q Consensus 65 gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~ 144 (286)
+++++|++++.|++.+. +++++|.|+|+++||+ . .|++.+.. .|+.
T Consensus 121 ~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EEg-~-----~G~~~~~~-----------------------~g~~--- 166 (418)
T 1xmb_A 121 HVTMLLGAAKILHEHRH--HLQGTVVLIFQPAEEG-L-----SGAKKMRE-----------------------EGAL--- 166 (418)
T ss_dssp HHHHHHHHHHHHHHTGG--GCSSEEEEEEECCTTT-T-----CHHHHHHH-----------------------TTTT---
T ss_pred HHHHHHHHHHHHHhccc--cCCceEEEEEeccccc-c-----ccHHHHHH-----------------------cCCc---
Confidence 99999999999999876 6889999999999993 2 38876532 2211
Q ss_pred HHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 023187 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (286)
Q Consensus 145 ~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~ 224 (286)
+.+++++.+|++++...+. ....+..+++|..+++|+++|+++|| +.| +.|.|||.++++++..|+
T Consensus 167 ----------~~~d~~i~~~~~~~~~~g~--~~~~~~~~~~g~~~~~i~v~G~~~Ha-s~P-~~g~nAi~~~a~~i~~l~ 232 (418)
T 1xmb_A 167 ----------KNVEAIFGIHLSARIPFGK--AASRAGSFLAGAGVFEAVITGKGGHA-AIP-QHTIDPVVAASSIVLSLQ 232 (418)
T ss_dssp ----------TTEEEEEEEEEEEEEETTC--EEECSEEEECEEEEEEEEEEEC-----------CCHHHHHHHHHHHHHH
T ss_pred ----------CCCCEEEEEecCCCCCCce--eEeeeccccccceeEEEEEEecCccc-CCC-ccCCCHHHHHHHHHHHHH
Confidence 1123455678765432211 11234456899999999999999995 699 999999999999999998
Q ss_pred HHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCC
Q 023187 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGF 283 (286)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~ 283 (286)
.+..+.. ++. ..+++++|.|++| ++.|+||++|++++|+|+.+
T Consensus 233 ~~~~~~~--------------~~~-~~~t~~vg~i~gG-~~~NvIP~~a~~~~diR~~~ 275 (418)
T 1xmb_A 233 QLVSRET--------------DPL-DSKVVTVSKVNGG-NAFNVIPDSITIGGTLRAFT 275 (418)
T ss_dssp TTCBCCS--------------SGG-GCEEEEEEEEC---------CCEEEEEEEEEESS
T ss_pred HHHhccc--------------CCC-CCcEEEEEEEEec-CcCCcCCCeEEEEEEEccCc
Confidence 7653311 122 3568999999999 99999999999999999976
No 14
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.98 E-value=2.4e-31 Score=246.84 Aligned_cols=206 Identities=23% Similarity=0.317 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcc-----cc-cEEEEEcCCCCCCCEEEeeccCCCCCCC------------------CCC
Q 023187 5 SVRAGNLIRQWMEDAGLRTWVDH-----LG-NVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIF 60 (286)
Q Consensus 5 E~~~~~~l~~~l~~~G~~v~~~~-----~~-nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------g~~ 60 (286)
+.++++||+++|+++|++++.+. .+ |++++++|.. .|+|+|.+|+|+||.. |..
T Consensus 41 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~--~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~ 118 (393)
T 1cg2_A 41 IAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG--GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIA 118 (393)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS--CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTT
T ss_pred HHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC--CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcc
Confidence 47899999999999999988754 23 8999998642 4899999999999863 346
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCC
Q 023187 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~ 140 (286)
|||++++++|++++.|++.+. +++++|.|+|+++||.+ ..|++.+... ...+
T Consensus 119 D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~G~~~~~~~------------------~~~~--- 170 (393)
T 1cg2_A 119 DDKGGNAVILHTLKLLKEYGV--RDYGTITVLFNTDEEKG-----SFGSRDLIQE------------------EAKL--- 170 (393)
T ss_dssp TTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGT-----TTTTHHHHHH------------------HHHH---
T ss_pred cchHHHHHHHHHHHHHHhcCC--CCCCCEEEEEEcccccC-----CccHHHHHHH------------------Hhhc---
Confidence 999999999999999999886 67789999999999974 2488765321 0000
Q ss_pred ChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 023187 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (286)
Q Consensus 141 ~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i 220 (286)
++. + +..+++.. ....++.+++|..+++|+++|+++|||+.| +.|.|||.++++++
T Consensus 171 -------------~d~--~---i~~e~~~~-----~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p-~~g~nAi~~~~~~i 226 (393)
T 1cg2_A 171 -------------ADY--V---LSFEPTSA-----GDEKLSLGTSGIAYVQVNITGKASHAGAAP-ELGVNALVEASDLV 226 (393)
T ss_dssp -------------CSE--E---EECCCEET-----TSCEEESEECEEEEEEEEEECBCEETTSCG-GGSBCHHHHHHHHH
T ss_pred -------------CCE--E---EEeCCCCC-----CCCcEEEeeeeeEEEEEEEEeeecccCCCc-ccCcCHHHHHHHHH
Confidence 111 1 23344310 012456779999999999999999977789 89999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCC
Q 023187 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~ 284 (286)
..|+.+... . ...+++++.|++| .+.|+||++|++++|+|+++.
T Consensus 227 ~~l~~~~~~------------------~-~~~~~~v~~i~gG-~~~NvIP~~a~~~~~iR~~~~ 270 (393)
T 1cg2_A 227 LRTMNIDDK------------------A-KNLRFNWTIAKAG-NVSNIIPASATLNADVRYARN 270 (393)
T ss_dssp HHHGGGCBT------------------T-TTEEEEEEEEEEC-SSTTEECSEEEEEEEEEESSH
T ss_pred HHHHhhhCc------------------c-cCceEEEEEEeCC-CCCCEECcccEEEEEEeeCCh
Confidence 999876432 2 4578999999999 899999999999999999864
No 15
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.98 E-value=2.5e-31 Score=244.56 Aligned_cols=221 Identities=19% Similarity=0.211 Sum_probs=162.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE---cccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~---~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------------- 57 (286)
+|++|.++++||+++|+++|++++. +..+|+++++ |. +.|+|+|.+|||+||.+
T Consensus 18 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~ 94 (377)
T 3isz_A 18 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 94 (377)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEE-ES--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEe-CC--CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEE
Confidence 4778999999999999999999884 4568999988 53 36899999999999863
Q ss_pred -CCC-ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHH
Q 023187 58 -GIF-DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (286)
Q Consensus 58 -g~~-D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l 135 (286)
+++ |||++++++|.+++.|.+.+. +++++|.|+|+++||.++ ..|++.+.. .+
T Consensus 95 g~G~~D~k~g~~~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~~----~~G~~~~~~-------------------~~ 149 (377)
T 3isz_A 95 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEATA----KDGTIHVVE-------------------TL 149 (377)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----SSSHHHHHH-------------------HH
T ss_pred eCChhhhhHHHHHHHHHHHHHHHhCC--CCCceEEEEEEcccccCc----cccHHHHHH-------------------HH
Confidence 233 999999999999999988776 788999999999999853 238886532 12
Q ss_pred HhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 023187 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (286)
Q Consensus 136 ~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~ 215 (286)
...+..+ + .. +..++.... ..+ ..+..+++|..+++|+++|+++|+ +.| +.|.|||.+
T Consensus 150 ~~~~~~~------------d---~~--~~~e~~~~~-~~g--~~i~~g~~g~~~~~i~~~G~~~Ha-~~p-~~g~nai~~ 207 (377)
T 3isz_A 150 MARDEKI------------T---YC--MVGEPSSAK-NLG--DVVKNGRRGSITGNLYIQGIQGHV-AYP-HLAENPIHK 207 (377)
T ss_dssp HHTTCCC------------C---EE--EECCCCBSS-STT--SEEEEEECEEEEEEEEEECC---------CGGGCHHHH
T ss_pred HhcCCCC------------C---EE--EEcCCCCcc-cCC--ceEEEEcceEEEEEEEEEcccccc-CCC-ccCcCHHHH
Confidence 2222221 1 11 222332110 011 125578999999999999999995 689 999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 216 ~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++++.+|+++..... .+....++++++.|++|+.+.|+||++|++.+|+|+++.+
T Consensus 208 ~~~~i~~l~~~~~~~~--------------~~~~~~~~~~v~~i~gg~~~~nvip~~~~~~~diR~~~~~ 263 (377)
T 3isz_A 208 AALFLQELTTYQWDKG--------------NEFFPPTSLQIANIHAGTGSNNVIPAELYIQFNLRYCTEV 263 (377)
T ss_dssp HHHHHHHHHHCCCCCC--------------CSSSCCCEEEEEEEEECCSCSSCCCSEEEEEEEEEECTTS
T ss_pred HHHHHHHHHhcccccc--------------ccccCCceeEEEEEECCCCCCcccCCceEEEEEEecCCCC
Confidence 9999999987643210 0122567999999999944899999999999999998754
No 16
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.98 E-value=5.9e-32 Score=248.72 Aligned_cols=217 Identities=19% Similarity=0.156 Sum_probs=165.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEccc-ccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------CCC-ccH
Q 023187 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHL-GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------GIF-DGS 63 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-v~~~~~-~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------g~~-D~k 63 (286)
+|++|.++++||+++|+++|++ ++++.. .|++++++++ ..|+|+|.+|+|+||.+ +++ |||
T Consensus 28 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~--~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K 105 (369)
T 3tx8_A 28 PSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRG--LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMK 105 (369)
T ss_dssp BTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCC--CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTH
T ss_pred CCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCC--CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccch
Confidence 4788999999999999999873 444333 4699999765 36899999999999962 455 999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCChh
Q 023187 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (286)
Q Consensus 64 ~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d 143 (286)
++++++|++++.|++.+ .++++|.|+|+++||.+. ...|++.+... +. +
T Consensus 106 ~~~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g~---~~~G~~~~~~~-----------------------~~--~ 154 (369)
T 3tx8_A 106 SGLAVYLHTFATLATST---ELKHDLTLIAYECEEVAD---HLNGLGHIRDE-----------------------HP--E 154 (369)
T ss_dssp HHHHHHHHHHHHHTSCT---TCCSEEEEEEECCCSSCT---TSCHHHHHHHH-----------------------CG--G
T ss_pred HHHHHHHHHHHHHHhhc---CCCccEEEEEEeccccCc---ccccHHHHHHh-----------------------cc--c
Confidence 99999999999998753 578999999999999842 01366654321 10 0
Q ss_pred hHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 023187 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (286)
Q Consensus 144 ~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l 223 (286)
.++ ..++ ++.||+. ..++.+++|..+++|+++|+++|| +.| +.|.|||.++++++..|
T Consensus 155 -------~~~--~~~~---i~~ep~~--------~~i~~~~~G~~~~~i~v~G~~~Ha-~~p-~~g~nAi~~~a~~i~~l 212 (369)
T 3tx8_A 155 -------WLA--ADLA---LLGEPTG--------GWIEAGCQGNLRIKVTAHGVRAHS-ARS-WLGDNAMHKLSPIISKV 212 (369)
T ss_dssp -------GGC--CSEE---EECCCCT--------TCEEESBCEEEEEEEEEECBCCBT-TSG-GGSBCTGGGGHHHHHHH
T ss_pred -------ccC--CCEE---EEeCCCC--------CceeeecceEEEEEEEEeeecccc-CCC-CcCcCHHHHHHHHHHHH
Confidence 001 1122 6767642 246678999999999999999995 689 99999999999999999
Q ss_pred HHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+++..+.. ..++.....++++|.|++| ++.|+||++|++++|+|+.+.+
T Consensus 213 ~~~~~~~~------------~~~~~~~~~~~~vg~i~gG-~~~NvIP~~a~~~~diR~~~~~ 261 (369)
T 3tx8_A 213 AAYKAAEV------------NIDGLTYREGLNIVFCESG-VANNVIPDLAWMNLNFRFAPNR 261 (369)
T ss_dssp HHCCCCEE------------EETTEEEECEEEEEEEEEC-SBTTBCCSEEEEEEEEEECTTS
T ss_pred Hhhccccc------------ccCCcccCceEEEEEEECC-CCCccccCcEEEEEEEecCCCC
Confidence 98654310 0001112468999999998 9999999999999999998764
No 17
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.97 E-value=5.5e-32 Score=254.38 Aligned_cols=205 Identities=20% Similarity=0.164 Sum_probs=160.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCE-EEEcccccEEEEEcCCCC-CCCEEEeeccCCCCCCC--------------C-------
Q 023187 2 SPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------G------- 58 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~-v~~~~~~nv~a~~~g~~~-~~~~l~~~~H~DtV~~~--------------g------- 58 (286)
|..|.++++||+++|+++|++ ++++..+||+++++|+.+ +.|+|+|.||+||||.. |
T Consensus 53 ~~~e~~~~~~l~~~l~~~G~~~~~~d~~~nv~a~~~g~~~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~ 132 (434)
T 3ife_A 53 TPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNE 132 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEECTTSCEEEEECCBSSSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEET
T ss_pred CHHHHHHHHHHHHHHHHcCCceEEECCCcEEEEEeCCCCCCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceeccc
Confidence 458999999999999999997 999999999999988643 46899999999999851 1
Q ss_pred -------------------------------CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCc
Q 023187 59 -------------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107 (286)
Q Consensus 59 -------------------------------~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~ 107 (286)
+.|||++++++|++++.|++.+. .++++|.|+|++|||++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~--~~~~~i~~if~~~EE~g~------ 204 (434)
T 3ife_A 133 ELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQ--IKHGKIRVAFTPDEEIGR------ 204 (434)
T ss_dssp TTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTT--SCBCCEEEEEESCGGGTC------
T ss_pred ccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHhCCC--CCCCCEEEEEECCcccCh------
Confidence 37999999999999999999876 789999999999999843
Q ss_pred chhHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecc
Q 023187 108 GSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 187 (286)
Q Consensus 108 Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~ 187 (286)
|++.+. .+.+ +++. . +.+++++ ...++.+++|.
T Consensus 205 Ga~~~~------------------~~~~-----------------~~d~---~--~~~d~~~-------~g~i~~~~~G~ 237 (434)
T 3ife_A 205 GPAHFD------------------VEAF-----------------GASF---A--YMMDGGP-------LGGLEYESFNA 237 (434)
T ss_dssp TGGGCC------------------HHHH-----------------CCSE---E--EECCCCS-------TTEEECCBCEE
T ss_pred HHHHhh------------------hhhc-----------------CCCE---E--EEecCCC-------CCceeecCCCe
Confidence 776541 0101 1111 1 2223321 11356789999
Q ss_pred eEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccc
Q 023187 188 TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASN 267 (286)
Q Consensus 188 ~~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~N 267 (286)
.+++|+++|+++|||+.| +.|+|||.++++++..|+++.. +...+.++|.+++| ..|
T Consensus 238 ~~~~i~v~G~~~Hag~~P-~~g~nAi~~aa~~i~~l~~~~~--------------------~~~~~~~~g~i~~g--~~n 294 (434)
T 3ife_A 238 AGAKLTFNGTNTHPGTAK-NKMRNATKLAMEFNGHLPVEEA--------------------PEYTEGYEGFYHLL--SLN 294 (434)
T ss_dssp EEEEEEEECBCCCGGGCT-TTCBCHHHHHHHHHHTSCTTCS--------------------GGGCCTTCCEEEEE--EEE
T ss_pred EEEEEEEEEEecCCCCCc-ccchhHHHHHHHHHHhcccccC--------------------CCcceeeeEEEEee--eEe
Confidence 999999999999987789 8999999999999998876411 01223345667665 589
Q ss_pred eecCeEEEEEEEecCCC
Q 023187 268 VIPGEIIVTGYIHCGFT 284 (286)
Q Consensus 268 vIP~~~~~~~diR~~~~ 284 (286)
+||++|++++|+|+.+.
T Consensus 295 ~iP~~a~~~~diR~~~~ 311 (434)
T 3ife_A 295 GDVEQSKAYYIIRDFDR 311 (434)
T ss_dssp ECSSEEEEEEEEEESSH
T ss_pred EecCeEEEEEEEecCCH
Confidence 99999999999999864
No 18
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.96 E-value=8e-29 Score=235.69 Aligned_cols=232 Identities=14% Similarity=0.059 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcc---cccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------------CC
Q 023187 5 SVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GI 59 (286)
Q Consensus 5 E~~~~~~l~~~l~~~G~~v~~~~---~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~----------------------g~ 59 (286)
|.++++||+++|+++|++++++. .+||+++++|+.++.|+|+|.||+||||.+ |.
T Consensus 66 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~ 145 (481)
T 2pok_A 66 LKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGV 145 (481)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTT
T ss_pred HHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEcccc
Confidence 49999999999999999998754 578999998653346899999999999863 34
Q ss_pred CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCC
Q 023187 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (286)
Q Consensus 60 ~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g 139 (286)
.|||++++++|++++.|++.+. .++++|.|+|+++||++ +.|++.+... . .+ .
T Consensus 146 ~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~g~~~~~~~------------------~-~~-~ 198 (481)
T 2pok_A 146 DDDKGHITARLSALRKYMQHHD--DLPVNISFIMEGAEESA-----STDLDKYLEK------------------H-AD-K 198 (481)
T ss_dssp TTTHHHHHHHHHHHHHHHHTCS--SCSSEEEEEEESCGGGT-----TTTHHHHHHH------------------H-HH-H
T ss_pred ccCcHHHHHHHHHHHHHHHhcC--CCCCCEEEEEecccccC-----chhHHHHHHH------------------h-Hh-h
Confidence 7999999999999999998854 68899999999999973 2477654311 0 00 0
Q ss_pred CChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecC--CCCCCCCCCCCCCHHHHHH
Q 023187 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTVPMSMRQDPMTAAA 217 (286)
Q Consensus 140 ~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~--~Hags~P~~~g~nAi~~~a 217 (286)
+. +++. + +..+++... .....++.+++|..+++|+++|++ +|| +.| +.|.|||..++
T Consensus 199 ~~-----------~~d~--~---i~~~~~~~~---~~~~~i~~~~~G~~~~~i~v~G~~g~~Hs-s~p-~~g~nAi~~~a 257 (481)
T 2pok_A 199 LR-----------GADL--L---VWEQGTKNA---LEQLEISGGNKGIVTFDAKVKSADVDIHS-SYG-GVVESAPWYLL 257 (481)
T ss_dssp HT-----------TCSE--E---ECSCCBBCT---TSCEEEECCBCEEEEEEEEEECSSSCEEG-GGT-TTBCCHHHHHH
T ss_pred cc-----------CCCE--E---EECCCCccC---CCCeeEEEecceeEEEEEEEecCCCCccc-cCC-CCCCCHHHHHH
Confidence 00 0111 1 222332111 012356678999999999999999 896 899 89999999999
Q ss_pred HHHHHHHHHhcCCCCCccc---------------------CCCC----------C--ccccccC---CCCeEEEEEEEee
Q 023187 218 ELIVLLERLCKHPKDFLSY---------------------DGRS----------N--CSTLESL---SSSLVCTVGEISS 261 (286)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~---------------------~~~~----------~--~~~~~~~---~~~~~~~~g~i~~ 261 (286)
+++..|+++..+ ..+..+ +.+. . .....+. ...+++++|.|++
T Consensus 258 ~~i~~l~~~~~~-i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~g 336 (481)
T 2pok_A 258 QALQSLRAADGR-ILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQS 336 (481)
T ss_dssp HHHHHTBCTTSC-BCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEE
T ss_pred HHHHHhhCCCCc-eeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeec
Confidence 999988754200 000000 0000 0 0000000 0246899999999
Q ss_pred cC---CccceecCeEEEEEEEecCCCC
Q 023187 262 WP---SASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 262 g~---~~~NvIP~~~~~~~diR~~~~~ 285 (286)
|. ++.|+||++|++.+|+|+.+.+
T Consensus 337 G~~~~~~~NvIP~~a~~~~diR~~~~~ 363 (481)
T 2pok_A 337 GYQGQGVKTILPAEASAKLEVRLVPGL 363 (481)
T ss_dssp ECCSSSCCCEECSEEEEEEEEEECTTC
T ss_pred CCCCCCCCeeccCeeEEEEEEEeCCCC
Confidence 82 2789999999999999998764
No 19
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.96 E-value=9.1e-29 Score=227.69 Aligned_cols=200 Identities=18% Similarity=0.104 Sum_probs=149.5
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEccc----ccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------CC
Q 023187 4 ASVRAGNLIRQWMEDAGLRTWVDHL----GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GI 59 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~v~~~~~----~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------g~ 59 (286)
+|.++++||+++|+ |++++.+.. +|+++ ++|+ |+|+|.+|+|+||.+ |.
T Consensus 32 ~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~----~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~ 104 (369)
T 2f7v_A 32 AEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT----PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGV 104 (369)
T ss_dssp SSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC----CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTT
T ss_pred cHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC----CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEeccc
Confidence 89999999999999 999887654 68999 8763 789999999999864 34
Q ss_pred CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCC
Q 023187 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (286)
Q Consensus 60 ~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g 139 (286)
.|||+|++++|++++. ++++|.|+|+++||.+ ++.|++.+.. .+
T Consensus 105 ~D~k~g~a~~l~a~~~---------~~~~v~~~~~~~EE~~----g~~G~~~~~~-----------------------~~ 148 (369)
T 2f7v_A 105 CDIKGAAAALVAAANA---------GDGDAAFLFSSDEEAN----DPRCIAAFLA-----------------------RG 148 (369)
T ss_dssp TTTHHHHHHHHHHHTT---------CCCCEEEEEESCTTSS----SCCHHHHHHT-----------------------TC
T ss_pred ccccHHHHHHHHHHhc---------CCCCEEEEEEeCcccC----CCcCHHHHHh-----------------------cC
Confidence 6899999999998764 3578999999999972 2458886642 11
Q ss_pred CChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCCCCCCCCCC-CCCCHHHHHHH
Q 023187 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAE 218 (286)
Q Consensus 140 ~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~Hags~P~~-~g~nAi~~~a~ 218 (286)
..+ +. + +..+++ . ..++.+++|..+++|+++|+++|| +.| + .|.|||.++++
T Consensus 149 ~~~------------d~--~---i~~e~~------~--~~i~~~~~g~~~~~i~v~G~~~Ha-~~p-~~~g~nAi~~~~~ 201 (369)
T 2f7v_A 149 LPY------------DA--V---LVAEPT------M--SEAVLAHRGISSVLMRFAGRAGHA-SGK-QDPAASALHQAMR 201 (369)
T ss_dssp CCC------------SE--E---EECCCS------T--TCBBCCBCCEEEEEEEEECCCC--------CTTSCHHHHHHH
T ss_pred CCC------------CE--E---EECCCC------C--CcceeecCceEEEEEEEeeeCccc-CCC-CcCCCCHHHHHHH
Confidence 111 11 1 233443 1 235567999999999999999995 699 8 99999999999
Q ss_pred HHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 219 LIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 219 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
++.+|+++..+... ...++..+ +++++|.|++| .+.|+||++|++++|+|+.+.+
T Consensus 202 ~i~~l~~~~~~~~~----------~~~~~~~~-~~~~vg~i~gG-~~~NviP~~a~~~~diR~~~~~ 256 (369)
T 2f7v_A 202 WGGKALDHVESLAH----------ARFGGLTG-LRFNIGRVDGG-IKANMIAPAAELRFGFRPLPSM 256 (369)
T ss_dssp HHHHHHHHHHHTTT----------CEETTEES-CEEEEEEEEEC-SSTTSCCSEEEEEEEEECCTTC
T ss_pred HHHHHHhhhhhhcc----------cccCcccC-CceEEEEeecC-CCCCcCCCceEEEEEEeeCCCC
Confidence 99999987643210 00011112 68999999999 8999999999999999998764
No 20
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.96 E-value=1.5e-28 Score=233.39 Aligned_cols=233 Identities=16% Similarity=0.062 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEccc--------------ccEEEEEcCCCCCCCEEEeeccCCCCCCC-----------
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVDHL--------------GNVHGRVEGLNASAQALLIGSHLDTVVDA----------- 57 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~~~--------------~nv~a~~~g~~~~~~~l~~~~H~DtV~~~----------- 57 (286)
++|.++++||+++|+++|++++++.. +||++++++. +..|+|+|.+|+|+||.+
T Consensus 43 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~ 121 (479)
T 2zog_A 43 GEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSD-PQKKTVCIYGHLDVQPAALEDGWDSEPFT 121 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTS
T ss_pred hHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCC-CCCCeEEEEEecCCCCCCccccCcCCCCc
Confidence 35689999999999999999987653 7899999653 346899999999999863
Q ss_pred -----------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCC
Q 023187 58 -----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDK 126 (286)
Q Consensus 58 -----------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~ 126 (286)
|++|||++++++|++++.|++.+. +++++|.|+|+++||.+ +.|++.+.....
T Consensus 122 ~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~~~--------- 185 (479)
T 2zog_A 122 LVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ--EIPVNLRFCLEGMEESG-----SEGLDELIFAQK--------- 185 (479)
T ss_dssp CEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGT-----CTTHHHHHHHTT---------
T ss_pred ceeECCEEEeeccccChHHHHHHHHHHHHHHHhCC--CCCCcEEEEEecccccC-----CccHHHHHHhhh---------
Confidence 348999999999999999999887 78899999999999973 358886643210
Q ss_pred CCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecC--CCCCCC
Q 023187 127 SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTV 204 (286)
Q Consensus 127 ~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~--~Hags~ 204 (286)
.++.. +++ +. +..+++.. +. ....++.+++|..+++|+++|++ +|| +.
T Consensus 186 -----------~~~~~----------~~d---~~--i~~e~~~~-~~--~~~~i~~~~~G~~~~~i~v~G~~~~~Hs-~~ 235 (479)
T 2zog_A 186 -----------DKFFK----------DVD---YV--CISDNYWL-GK--NKPCITYGLRGICYFFIEVECSDKDLHS-GV 235 (479)
T ss_dssp -----------TTTTT----------TCC---EE--EECCCBCS-SS--SSCEEEEEECEEEEEEEEEECCSSCEEH-HH
T ss_pred -----------hhhcc----------cCC---EE--EEeCCCcC-CC--CCeEEEEecceEEEEEEEEEeCCCCCcc-CC
Confidence 01100 011 11 23344321 11 13356678999999999999999 996 44
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCCC--cccCCCCC--------------cc------cccc---C-----------
Q 023187 205 PMSMRQDPMTAAAELIVLLERLCKHPKDF--LSYDGRSN--------------CS------TLES---L----------- 248 (286)
Q Consensus 205 P~~~g~nAi~~~a~~i~~l~~~~~~~~~~--~~~~~~~~--------------~~------~~~~---~----------- 248 (286)
| |.||+..+++++..|+++..+.... ..+..... .+ .+.. .
T Consensus 236 ~---g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 312 (479)
T 2zog_A 236 Y---GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHR 312 (479)
T ss_dssp H---TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHH
T ss_pred C---CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHh
Confidence 4 7999999999999988765431000 00000000 00 0000 0
Q ss_pred CCCeEEEEEEEeec---CCccceecCeEEEEEEEecCCCC
Q 023187 249 SSSLVCTVGEISSW---PSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 249 ~~~~~~~~g~i~~g---~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
...++++++.|++| +++.|+||++|++.+|+|+.+.+
T Consensus 313 ~~~~~~~v~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~ 352 (479)
T 2zog_A 313 WRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDM 352 (479)
T ss_dssp HTSCEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTC
T ss_pred hcCCCeEEeeeecCCcCCCCccccCCceEEEEEEEeCCCC
Confidence 01468999999987 46899999999999999998764
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.96 E-value=4.1e-28 Score=226.68 Aligned_cols=203 Identities=17% Similarity=0.166 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcccccEEEEEcCCCC-CCCEEEeeccCCCCCCC--------------C--------
Q 023187 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------G-------- 58 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-v~~~~~~nv~a~~~g~~~-~~~~l~~~~H~DtV~~~--------------g-------- 58 (286)
.+|.++++||+++|+++|++ ++++..+|++++++|+.+ ..|+|+|.+|||+||.+ |
T Consensus 29 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~g~~~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g 108 (417)
T 1fno_A 29 EGQWKLLRLLKQQLEEMGLVNITLSEKGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIG 108 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECTTCCEEEEECCSSCSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSS
T ss_pred ccHHHHHHHHHHHHHHcCCCeEEECCCceEEEEECCCCCCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeeccccc
Confidence 48999999999999999998 888888999999987532 35899999999999753 2
Q ss_pred -----------------------------CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcch
Q 023187 59 -----------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGS 109 (286)
Q Consensus 59 -----------------------------~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs 109 (286)
++|||++++++|++++.|++.+ .++++|+|+|+++||.+ .|+
T Consensus 109 ~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g------~Ga 179 (417)
T 1fno_A 109 DEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP---IPHGDIKVAFTPDEEVG------KGA 179 (417)
T ss_dssp SCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS---CCCCCEEEEEESCGGGT------CTT
T ss_pred ccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC---CCCCcEEEEEEeccccC------CCh
Confidence 1899999999999999999876 36799999999999974 277
Q ss_pred hHhhcccccchhcccCCCCCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceE
Q 023187 110 AALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTR 189 (286)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~ 189 (286)
+.+. .+ ++. ++ .+ +++++++. ..++.+++|..+
T Consensus 180 ~~~~------------------~~-----~~~------------~d--~~---i~~d~~~~-------g~i~~~~~g~~~ 212 (417)
T 1fno_A 180 KHFD------------------VE-----AFG------------AQ--WA---YTVDGGGV-------GELEFENFNAAS 212 (417)
T ss_dssp TTCC------------------HH-----HHC------------CS--EE---EECCCCST-------TBEECCBCEEEE
T ss_pred hhhc------------------hh-----hcC------------CC--EE---EEeCCCCc-------CeeEEecCCcee
Confidence 6432 00 011 11 12 44443321 124567999999
Q ss_pred EEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCcccee
Q 023187 190 LKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVI 269 (286)
Q Consensus 190 ~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvI 269 (286)
++|+++|+++||+..| +.|.|||.++++++..|+.+..+. .+.....+++++.|++|
T Consensus 213 ~~i~~~G~~~Hs~~~p-~~g~nAi~~~a~~i~~l~~~~~~~---------------~~~~~~~~~~v~~i~gG------- 269 (417)
T 1fno_A 213 VNIKIVGNNVHPGTAK-GVMVNALSLAARIHAEVPADEAPE---------------TTEGYEGFYHLASMKGT------- 269 (417)
T ss_dssp EEEEEECBCCCGGGCT-TTCBCHHHHHHHHHHTSCTTSSGG---------------GCCTTCCEEEEEEEEEC-------
T ss_pred EEEEEEeeccCCCCCc-cccCCHHHHHHHHHHhhhccCCcc---------------cccccccEEEEEEEeec-------
Confidence 9999999999965579 899999999999999887653211 01123457899999876
Q ss_pred cCeEEEEEEEecCCC
Q 023187 270 PGEIIVTGYIHCGFT 284 (286)
Q Consensus 270 P~~~~~~~diR~~~~ 284 (286)
|++|++++|+|+.+.
T Consensus 270 p~~a~~~~d~R~~~~ 284 (417)
T 1fno_A 270 VDRAEMHYIIRDFDR 284 (417)
T ss_dssp SSEEEEEEEEEESSH
T ss_pred cCeEEEEEEEeCCCH
Confidence 899999999999864
No 22
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.95 E-value=2.9e-27 Score=225.17 Aligned_cols=232 Identities=16% Similarity=0.115 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEccc--------------ccEEEEEcCCCCCCCEEEeeccCCCCCCC------------
Q 023187 4 ASVRAGNLIRQWMEDAGLRTWVDHL--------------GNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~v~~~~~--------------~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------ 57 (286)
+|.++++||+++|+++|++++.+.. .|+++++++. +..|+|+|.+||||||.+
T Consensus 51 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~ 129 (485)
T 3dlj_A 51 ELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSD-PTKGTVCFYGHLDVQPADRGDGWLTDPYVL 129 (485)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEEEECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEEEECCC-CCCCEEEEEeeecCCCCCCcccCCCCCCcc
Confidence 3789999999999999999876542 2699999653 346899999999999862
Q ss_pred ----------CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCC
Q 023187 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (286)
Q Consensus 58 ----------g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~ 127 (286)
|..|||++++++|++++.|++.+. +++++|.|+|+++||.+ ..|++.+....
T Consensus 130 ~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~g~~~~~~~~----------- 191 (485)
T 3dlj_A 130 TEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQ--DLPVNIKFIIEGMEEAG-----SVALEELVEKE----------- 191 (485)
T ss_dssp EEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGT-----TTTHHHHHHHH-----------
T ss_pred EEECCEEEecccccCcHHHHHHHHHHHHHHHhCC--CCCccEEEEEEcccccC-----CccHHHHHHhh-----------
Confidence 345999999999999999999887 78899999999999973 24777653210
Q ss_pred CCcHHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEEEEecCC--CCCCCC
Q 023187 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQG--HAGTVP 205 (286)
Q Consensus 128 g~~~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~v~G~~~--Hags~P 205 (286)
..++. +.+++.+-+| ++.. + .....++.+++|..+++|+|+|+++ ||| .
T Consensus 192 ---------~~~~~-------------~~~d~~~~~~--~~~~-~--~~~~~~~~g~~g~~~~~i~v~G~~~~~H~~-~- 242 (485)
T 3dlj_A 192 ---------KDRFF-------------SGVDYIVISD--NLWI-S--QRKPAITYGTRGNSYFMVEVKCRDQDFHSG-T- 242 (485)
T ss_dssp ---------TTTTS-------------TTCCEEEECC--CBCC-C----CCEEEEEECEEEEEEEEEESCSSCEETT-T-
T ss_pred ---------hhhcc-------------cCCCEEEEcC--CCcc-C--CCCeeEEEeccceEEEEEEEEECCCCCcCC-C-
Confidence 00110 0111222233 2211 0 0123456789999999999999999 964 3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCC--CcccCCCCCcc------ccc--cCC--------------------------
Q 023187 206 MSMRQDPMTAAAELIVLLERLCKHPKD--FLSYDGRSNCS------TLE--SLS-------------------------- 249 (286)
Q Consensus 206 ~~~g~nAi~~~a~~i~~l~~~~~~~~~--~~~~~~~~~~~------~~~--~~~-------------------------- 249 (286)
.|.||+.+++.++..|+.+..+... ...++...... .+. |..
T Consensus 243 --~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 320 (485)
T 3dlj_A 243 --FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLW 320 (485)
T ss_dssp --STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHH
T ss_pred --CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHh
Confidence 3677777777777777766443100 00000000000 000 000
Q ss_pred CCeEEEEEEEeec---CCccceecCeEEEEEEEecCCCC
Q 023187 250 SSLVCTVGEISSW---PSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 250 ~~~~~~~g~i~~g---~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
..++++++.|++| |++.||||++|++++|+|+.+.+
T Consensus 321 ~~~~~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~ 359 (485)
T 3dlj_A 321 RYPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHM 359 (485)
T ss_dssp TSCEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTC
T ss_pred cCCceEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCC
Confidence 1578999999987 37899999999999999998765
No 23
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.95 E-value=7.5e-28 Score=229.60 Aligned_cols=205 Identities=20% Similarity=0.198 Sum_probs=153.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCC--CCCCEEEeeccCCCCCCC---------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDA--------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~--~~~~~l~~~~H~DtV~~~--------------------- 57 (286)
.|++|.++++||+++|+++|++++.+..+|++++++|+. .+.|+|+|.+|+|+||..
T Consensus 29 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~ 108 (490)
T 3mru_A 29 PSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEW 108 (490)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTE
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEEcCCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCe
Confidence 377899999999999999999999998899999998642 246899999999999863
Q ss_pred ---CCC----ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCc
Q 023187 58 ---GIF----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (286)
Q Consensus 58 ---g~~----D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~ 130 (286)
+++ |||+|++++|+++ ++.. .++++|.|+|++|||.+ +.|++.+...
T Consensus 109 l~g~G~~lgaD~k~g~a~~l~~l---~~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~--------------- 162 (490)
T 3mru_A 109 VTAKGTTLGADNGIGMASCLAVL---ASKE---IKHGPIEVLLTIDEEAG-----MTGAFGLEAG--------------- 162 (490)
T ss_dssp EEETTBCCCHHHHTTHHHHHHHH---HCSS---CCCCSEEEEEESCSSST-----TGGGGTCCSS---------------
T ss_pred EecCCCccCCCCHHHHHHHHHHH---HhCC---CCCCCEEEEEEcccccc-----cHhHHHhhhc---------------
Confidence 234 9999999888765 3333 46899999999999983 4588765421
Q ss_pred HHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcc---------cccCC--cccceEeceecceEEEEEEEe-cC
Q 023187 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPV---------LEWVG--FPLGVVQGIAGQTRLKVTVRG-SQ 198 (286)
Q Consensus 131 ~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~---------~~~~~--~~~~vv~~~~G~~~~~i~v~G-~~ 198 (286)
.+.++ .+ +++++... ..+.. .+.....+++|..+++|+++| ++
T Consensus 163 --------~~~~~--------------~~---~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~ 217 (490)
T 3mru_A 163 --------WLKGD--------------IL---LNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKG 217 (490)
T ss_dssp --------SCCSS--------------EE---EECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCC
T ss_pred --------ccCCC--------------EE---EEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCC
Confidence 00000 00 11111100 00000 011113457899999999999 99
Q ss_pred CCCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEE
Q 023187 199 GHAGTVPMSMRQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTG 277 (286)
Q Consensus 199 ~Hags~P~~~g~-nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~ 277 (286)
+|||..| +.|+ |||..+++++..|++ . .+++++.|++| ++.|+||++|++.+
T Consensus 218 gHs~~~p-~~g~~nai~~~~~~l~~l~~---~----------------------~~~~v~~i~gG-~~~NvIP~~a~~~~ 270 (490)
T 3mru_A 218 GHSGCDI-HTGRGNANKLIGRFLAGHAQ---E----------------------LDLRLVEFRGG-SLRNAIPREAFVTV 270 (490)
T ss_dssp EETTTSS-SSCCCCHHHHHHHHHHHHTT---T----------------------TTCEEEEEEEC-SCTTEECCCEEEEE
T ss_pred ccccccc-ccCCcCHHHHHHHHHHHHHh---c----------------------CcEEEEEEECC-CCCcccCCccEEEE
Confidence 9975579 9999 999999999988764 1 13689999999 99999999999999
Q ss_pred EEecCC
Q 023187 278 YIHCGF 283 (286)
Q Consensus 278 diR~~~ 283 (286)
++|..+
T Consensus 271 ~iR~~~ 276 (490)
T 3mru_A 271 ALPAEN 276 (490)
T ss_dssp EEEGGG
T ss_pred EECccc
Confidence 999764
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.95 E-value=1.3e-26 Score=220.76 Aligned_cols=203 Identities=20% Similarity=0.233 Sum_probs=150.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCC--CCCCEEEeeccCCCCCCCC--------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDAG-------------------- 58 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~--~~~~~l~~~~H~DtV~~~g-------------------- 58 (286)
+|++|.++++||+++|+++|++++.+..+|++++++|+. ...|+|+|.+|+|+||.++
T Consensus 26 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~ 105 (487)
T 2qyv_A 26 PSYKEEQLAQFIINWAKTKGFFAERDEVGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDW 105 (487)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSE
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCE
Confidence 367899999999999999999999988899999998642 2468999999999998742
Q ss_pred ----CC----ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCc
Q 023187 59 ----IF----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (286)
Q Consensus 59 ----~~----D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~ 130 (286)
++ |||+|++++|++++ +.+ .++++|.|+|+++||++ +.|++.+...
T Consensus 106 l~g~G~~lgaD~k~g~a~~l~a~~---~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~--------------- 159 (487)
T 2qyv_A 106 VKAKGTTLGADNGIGMASALAVLE---SND---IAHPELEVLLTMTEERG-----MEGAIGLRPN--------------- 159 (487)
T ss_dssp EEETTBCCCHHHHHHHHHHHHHHH---CSS---SCCSSEEEEEESCTTTT-----CHHHHTCCSS---------------
T ss_pred EEeCCCCcCCcCHHHHHHHHHHHH---hCC---CCCCCEEEEEEeccccC-----CHHHHHHHHh---------------
Confidence 34 99999999999885 233 36789999999999973 3588765421
Q ss_pred HHHHHHhCCCChhhHHhhhccCCCccccceEEeeccCCcc--c--c-------cCCcccceEeceecceEEEEEEEe-cC
Q 023187 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPV--L--E-------WVGFPLGVVQGIAGQTRLKVTVRG-SQ 198 (286)
Q Consensus 131 ~~~~l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~--~--~-------~~~~~~~vv~~~~G~~~~~i~v~G-~~ 198 (286)
++.+|. + +++++... + . ....+.+++.+++| .+++|+++| ++
T Consensus 160 --------~~~~d~--------------~---~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~ 213 (487)
T 2qyv_A 160 --------WLRSEI--------------L---INTDTEENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRG 213 (487)
T ss_dssp --------CCCCSE--------------E---EECCCCCTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCC
T ss_pred --------ccCCCE--------------E---EEEccCCCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCC
Confidence 111110 1 22222210 0 0 00011223345677 899999999 89
Q ss_pred CCCCCCCCCCC-CCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCeEEEEEEEeecCCccceecCeEEEEE
Q 023187 199 GHAGTVPMSMR-QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIIVTG 277 (286)
Q Consensus 199 ~Hags~P~~~g-~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~g~~~~NvIP~~~~~~~ 277 (286)
+|||..| +.| .|||.++++++..|+.+. +..+++++.|++| ++.|+||++|++.+
T Consensus 214 ~Hsg~~~-~~g~~nAi~~~~~~i~~l~~~~----------------------~~~~~~v~~i~gG-~~~NvIP~~a~~~~ 269 (487)
T 2qyv_A 214 GHSGVDI-HTGRANAIKVLLRFLAELQQNQ----------------------PHFDFTLANIRGG-SIRNAIPRESVATL 269 (487)
T ss_dssp CBTTTTT-TSCCCCHHHHHHHHHHHHHHHC----------------------TTCCEEEEEEEEE-SCTTBCCCCEEEEE
T ss_pred ccCCccc-ccCCCCHHHHHHHHHHHHhhcc----------------------CCCcEEEEEEeCC-CcCcccCCceEEEE
Confidence 9965545 666 799999999999998752 1346899999999 99999999999999
Q ss_pred EE
Q 023187 278 YI 279 (286)
Q Consensus 278 di 279 (286)
|+
T Consensus 270 ~~ 271 (487)
T 2qyv_A 270 VF 271 (487)
T ss_dssp EE
T ss_pred Ee
Confidence 99
No 25
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.95 E-value=5.9e-27 Score=222.39 Aligned_cols=231 Identities=16% Similarity=0.116 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHHcCCE---EEEcc----cccEEEEEcCCCCCCCEEEeeccCCCCCCC-------------------
Q 023187 4 ASVRAGNLIRQWMEDAGLR---TWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~---v~~~~----~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------------- 57 (286)
+|.++++||+++|+++|++ +++.+ .+||+++++|. ..|+|+|.+||||||..
T Consensus 46 ~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~g~--~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~ 123 (472)
T 3pfe_A 46 YMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPGQ--IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLL 123 (472)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEECCS--EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEE
T ss_pred hHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEcCC--CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEE
Confidence 4899999999999999984 54322 35899999873 46899999999999851
Q ss_pred ---CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHH
Q 023187 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (286)
Q Consensus 58 ---g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~ 134 (286)
|..|||++++++|++++.|++.+. .+. +|.|+|+++||.+ ..|++.+.... .+.
T Consensus 124 ~grG~~D~K~~~a~~l~a~~~l~~~~~--~~~-~v~~~~~~~EE~g-----~~g~~~~~~~~---------------~~~ 180 (472)
T 3pfe_A 124 YGRGGADDGYSAYASLTAIRALEQQGL--PYP-RCILIIEACEESG-----SYDLPFYIELL---------------KER 180 (472)
T ss_dssp ESTTCCCCCHHHHHHHHHHHHHHHTTC--CCE-EEEEEEESCGGGT-----STTHHHHHHHH---------------HHH
T ss_pred EEeCcccCcHHHHHHHHHHHHHHHcCC--CCC-cEEEEEEeCCCCC-----ChhHHHHHHHh---------------Hhh
Confidence 334999999999999999999886 555 9999999999984 24887653210 000
Q ss_pred HHhCCCChhhHHhhhccCCCccccceEEeeccCCcccccCCcccceEeceecceEEEEE--EEecCCCCCCCCCCCC-CC
Q 023187 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVT--VRGSQGHAGTVPMSMR-QD 211 (286)
Q Consensus 135 l~~~g~~~d~~~~~~~~~~~~~i~~~~~lh~e~g~~~~~~~~~~~vv~~~~G~~~~~i~--v~G~~~Hags~P~~~g-~n 211 (286)
+. +++ +.+-+| ++.. + .....+..+++|..+++++ ++|+++| ++.| +.. .|
T Consensus 181 ~~----------------~~d---~~~~~~--~~~~-~--~~~~~i~~g~~G~~~~~~~v~~~G~~~H-~~~~-~~~~~n 234 (472)
T 3pfe_A 181 IG----------------KPS---LVICLD--SGAG-N--YEQLWMTTSLRGNLVGKLTVELINEGVH-SGSA-SGIVAD 234 (472)
T ss_dssp HC----------------CCS---EEEEEC--CBCS-C--SSSCEEEEEECEEEEEEEEEESCSSCBC-HHHH-TTTSCC
T ss_pred cc----------------CCC---EEEEeC--CCcC-C--CCCeeEEEeeeEEEEEEEEEEeCCCCcc-cCCC-CCCCCC
Confidence 00 112 222133 2211 1 1123567789999987755 4899999 5678 644 59
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccCCCCCc------------------------cccccCCC-----------CeEEEE
Q 023187 212 PMTAAAELIVLLERLCKHPKDFLSYDGRSNC------------------------STLESLSS-----------SLVCTV 256 (286)
Q Consensus 212 Ai~~~a~~i~~l~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~-----------~~~~~~ 256 (286)
||.+++++|.+|+++.........++.+... ...++... .+++++
T Consensus 235 ai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i 314 (472)
T 3pfe_A 235 SFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTV 314 (472)
T ss_dssp HHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEE
Confidence 9999999999998763110000000000000 00001100 478999
Q ss_pred EEEeecC---CccceecCeEEEEEEEecCCCC
Q 023187 257 GEISSWP---SASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 257 g~i~~g~---~~~NvIP~~~~~~~diR~~~~~ 285 (286)
+.|++|+ ++.||||++|++++|+|+.+.+
T Consensus 315 ~~i~gG~~~g~a~NvIP~~a~~~~diR~~~~~ 346 (472)
T 3pfe_A 315 TGADGFPAIADAGNVMRPVTSLKLSMRLPPLV 346 (472)
T ss_dssp EEEESCCCTTTCCSCBCSEEEEEEEEEECTTC
T ss_pred eeeecCcCCCCCCCEeCCccEEEEEeecCCCC
Confidence 9999873 6899999999999999998765
No 26
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.94 E-value=7.6e-26 Score=215.84 Aligned_cols=244 Identities=17% Similarity=0.157 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------CCCcc
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIFDG 62 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------------------g~~D~ 62 (286)
..+.++++||+++|+++|++++.. +|++++++... ..|.|+|.+|+||||.+ |..||
T Consensus 63 ~~~~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~g~-~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~ 139 (492)
T 3khx_A 63 PGPRKALDYMYEIAHRDGFTTHDV--DHIAGRIEAGK-GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDD 139 (492)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEE--TTTEEEEEEEC-SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTT
T ss_pred hHHHHHHHHHHHHHHHcCCcceEe--CCEEEEEEeCC-CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccC
Confidence 346799999999999999998753 57666654222 35899999999999974 45699
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCCh
Q 023187 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDI 142 (286)
Q Consensus 63 k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~~ 142 (286)
|++++++|++++.|++.+. +++++|.|+|++|||++ +.|++.+......-. .++.+
T Consensus 140 Kg~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g-----~~g~~~~~~~~~~~~-----------------~~~~~ 195 (492)
T 3khx_A 140 KGPTIAAYYAIKILEDMNV--DWKKRIHMIIGTDEESD-----WKCTDRYFKTEEMPT-----------------LGFAP 195 (492)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSSEEEEEEECCTTCC-----CCTTSHHHHHSCCCS-----------------EEECS
T ss_pred cHHHHHHHHHHHHHHHcCC--CCCCCEEEEEECCccCC-----CcCHHHHHHhCcCCC-----------------EEEec
Confidence 9999999999999999987 78999999999999984 358887765332100 01111
Q ss_pred hhHHhhhccCCCccccceEEeeccC-----------------C------------cccccCCc-c----cce---Eecee
Q 023187 143 AEESLLQLKYDPASVWGYIEVHIEQ-----------------G------------PVLEWVGF-P----LGV---VQGIA 185 (286)
Q Consensus 143 d~~~~~~~~~~~~~i~~~~~lh~e~-----------------g------------~~~~~~~~-~----~~v---v~~~~ 185 (286)
|.. ++..+....+ .++++.++. | .+.+++.. . .+. ..+++
T Consensus 196 d~~--~p~~~g~~G~-~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~ept~~~~~~~~~~~~~~~~g~k 272 (492)
T 3khx_A 196 DAE--FPCIHGEKGI-TTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQ 272 (492)
T ss_dssp SCS--SCSCCCBCEE-EEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEECSCHHHHHHHHHHHHHHTTCE
T ss_pred CCC--ccEEEecCcE-EEEEEEEeccccccccccceeEEecccccCCcCCchHheEeecccchHHHHHHHHHHHhhcCce
Confidence 100 0000000000 011111110 0 00000000 0 000 12468
Q ss_pred cce-----EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH------HHhc---CCCCCcccCCCCC-ccccccCCC
Q 023187 186 GQT-----RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE------RLCK---HPKDFLSYDGRSN-CSTLESLSS 250 (286)
Q Consensus 186 G~~-----~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~------~~~~---~~~~~~~~~~~~~-~~~~~~~~~ 250 (286)
|.. |++|+++|+++| +++| +.|+|||.+++++|.+|+ .+.. .... ..+++... ....++..+
T Consensus 273 G~~~~~~~~~~i~v~GkaaH-as~P-~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~d~~~G 349 (492)
T 3khx_A 273 GDSTVDSGILVLTVEGKAVH-GMDP-SIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLF-NSDFGEKMGMKFHTDVMG 349 (492)
T ss_dssp EEEEEETTEEEEEEECBCCC-C-------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTT-TCTTSGGGTCC-------
T ss_pred eEEEecCCeEEEEEEeEEcc-cCCC-ccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhC-CCCCccccCCccccCCcC
Confidence 888 999999999999 4689 999999999999998876 2211 0000 00001000 001112235
Q ss_pred CeEEEEEEEeecCCccceecCeEEEEEEEecCCCC
Q 023187 251 SLVCTVGEISSWPSASNVIPGEIIVTGYIHCGFTS 285 (286)
Q Consensus 251 ~~~~~~g~i~~g~~~~NvIP~~~~~~~diR~~~~~ 285 (286)
.+++|+|.|++| . |++|++++|+|+.+.+
T Consensus 350 ~~t~n~g~i~~g-~-----P~~a~~~idiR~~~~~ 378 (492)
T 3khx_A 350 DVTTNIGVITYD-N-----ENAGLFGINLRYPEGF 378 (492)
T ss_dssp CCEEEEEEEEEE-T-----TTCCEEEEEEEECTTC
T ss_pred ccEEeeeEEEEe-c-----CCEEEEEEEeeCCCCC
Confidence 688999999988 4 9999999999998754
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.93 E-value=1.6e-24 Score=205.27 Aligned_cols=240 Identities=15% Similarity=0.109 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------------CCCc
Q 023187 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------GIFD 61 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------------g~~D 61 (286)
..+.++++||+++|+++|++++.....++++.+ |. +.|+|+|.+|+|+||.+ |++|
T Consensus 43 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~-g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D 119 (470)
T 1lfw_A 43 KGPVDAMTKFLSFAKRDGFDTENFANYAGRVNF-GA--GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSAD 119 (470)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEETTTEEEEEE-CC--CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSS
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEecCeEEEEEe-CC--CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCccc
Confidence 356899999999999999998764333467776 53 35899999999999853 3379
Q ss_pred cHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccccchhcccCCCCCcHHHHHHhCCCC
Q 023187 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSID 141 (286)
Q Consensus 62 ~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~g~~~~~~l~~~g~~ 141 (286)
||++++++|++++.|++.+. +++++|.|+|+++||++ +.|++.+........ .++.
T Consensus 120 ~K~~~a~~l~a~~~l~~~~~--~~~~~i~~i~~~~EE~g-----~~G~~~~~~~~~~~~-----------------~~~~ 175 (470)
T 1lfw_A 120 DKGPSLTAYYGMLLLKEAGF--KPKKKIDFVLGTNEETN-----WVGIDYYLKHEPTPD-----------------IVFS 175 (470)
T ss_dssp SHHHHHHHHHHHHHHHHHTC--CCSSEEEEEEESCTTTT-----CHHHHHHHHHSCCCS-----------------EEEE
T ss_pred ChHHHHHHHHHHHHHHHcCC--CCCCCEEEEEecCcccC-----CccHHHHHHhCcCCc-----------------EEEE
Confidence 99999999999999999887 78999999999999983 358887654211000 0111
Q ss_pred hhhH---HhhhccCCCccccceEEeeccCC----cc---cccCCcccceEe--------------------------cee
Q 023187 142 IAEE---SLLQLKYDPASVWGYIEVHIEQG----PV---LEWVGFPLGVVQ--------------------------GIA 185 (286)
Q Consensus 142 ~d~~---~~~~~~~~~~~i~~~~~lh~e~g----~~---~~~~~~~~~vv~--------------------------~~~ 185 (286)
+|.+ .+++ .-..++++++++. .. ....+...+++. +++
T Consensus 176 ~D~~~~~~~ge------~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (470)
T 1lfw_A 176 PDAEYPIINGE------QGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELD 249 (470)
T ss_dssp SSEESSEEEEE------CEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCE
T ss_pred eCCCceEEEec------cceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccc
Confidence 1100 0000 0012344554321 00 000011111211 246
Q ss_pred cce-----EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH------HHh---cCCCCCcccCCCCC-ccccccCCC
Q 023187 186 GQT-----RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE------RLC---KHPKDFLSYDGRSN-CSTLESLSS 250 (286)
Q Consensus 186 G~~-----~~~i~v~G~~~Hags~P~~~g~nAi~~~a~~i~~l~------~~~---~~~~~~~~~~~~~~-~~~~~~~~~ 250 (286)
|.. +++|+++|+++| ++.| +.|+|||.++++++..|+ ++. .+... ..+++... ....++...
T Consensus 250 G~~~~~~~~~~i~v~G~~~H-a~~P-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~ 326 (470)
T 1lfw_A 250 GSFEINDESADIVLIGQGAH-ASAP-QVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEH-EDFYGKKLGIFHHDDLMG 326 (470)
T ss_dssp EEEEEETTEEEEEEECBCCB-TTCG-GGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTT-TCTTSTTTTCCCEETTTE
T ss_pred cceeecCCcEEEEEeecccC-CCCC-ccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcC-CCCcccccCCcccccccc
Confidence 664 899999999999 5789 999999999999998775 221 11000 00000000 000111113
Q ss_pred CeEEEEEEEeecCCccceecCe-EEEEEEEecCCCC
Q 023187 251 SLVCTVGEISSWPSASNVIPGE-IIVTGYIHCGFTS 285 (286)
Q Consensus 251 ~~~~~~g~i~~g~~~~NvIP~~-~~~~~diR~~~~~ 285 (286)
.+++++|.|+ .+|++ |++++|+|+++.+
T Consensus 327 ~~t~~~g~i~-------~~p~~~a~~~~diR~~~~~ 355 (470)
T 1lfw_A 327 DLASSPSMFD-------YEHAGKASLLNNVRYPQGT 355 (470)
T ss_dssp ECEEEEEEEE-------EETTSCEEEEEEEEECTTC
T ss_pred cceEEEEEEE-------EcCCceEEEEEEEecCCCC
Confidence 3566666654 47999 9999999998765
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.74 E-value=2.3e-17 Score=138.87 Aligned_cols=104 Identities=21% Similarity=0.165 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcc----cccEEEEEcCCCCCCCEEEeeccCCCCCCC----------------------
Q 023187 4 ASVRAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (286)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~v~~~~----~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------------- 57 (286)
+|.++++||+++|+++|++++++. ..|++++++|..++.|+|+|.+|+||||.+
T Consensus 30 ~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~Gr 109 (198)
T 1q7l_A 30 DYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYAR 109 (198)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECT
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeC
Confidence 689999999999999999987653 348999998764445899999999999862
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhh
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~ 113 (286)
|++|||++++++|++++.|++.+. +++++|.|+|+++||.++ +.|++.+.
T Consensus 110 Ga~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~----~~Ga~~~~ 159 (198)
T 1q7l_A 110 GAQDMKCVSIQYLEAVRRLKVEGH--RFPRTIHMTFVPDEEVGG----HQGMELFV 159 (198)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHTTC--CCSSCEEEEEESCGGGTS----TTTHHHHT
T ss_pred cchhchHHHHHHHHHHHHHHHcCC--CCCCCEEEEEEcccccCc----cccHHHHH
Confidence 348999999999999999999886 788999999999999842 45888764
No 29
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.71 E-value=2.8e-17 Score=145.95 Aligned_cols=108 Identities=21% Similarity=0.337 Sum_probs=94.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEccc-------ccEEEEEcCCCCCCCEEEeeccCCCCCCC-CCCccHHHHHHHHHHH
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHL-------GNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISAL 73 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~-------~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-g~~D~k~gv~a~l~a~ 73 (286)
|..|.++++||+++|+++|++++++.. .||+++++|.. ..+.|+|.+|+|+||.+ |+.|+|+|++++|+++
T Consensus 31 ~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~-~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~ 109 (284)
T 1tkj_A 31 RPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGD-PNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETA 109 (284)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSE-EEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCC-CCCEEEEEeecCCCCCCCCCccChHHHHHHHHHH
Confidence 347999999999999999999887643 59999998753 24789999999999987 8999999999999999
Q ss_pred HHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccc
Q 023187 74 KVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (286)
Q Consensus 74 ~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (286)
+.|++.+. +++++|.|+|+++||. |+.||+.++..+.
T Consensus 110 ~~l~~~~~--~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~~~ 146 (284)
T 1tkj_A 110 LAVSRAGY--QPDKHLRFAWWGAEEL-----GLIGSKFYVNNLP 146 (284)
T ss_dssp HHHHHTTC--CCSEEEEEEEESCGGG-----TSHHHHHHHHHSC
T ss_pred HHHHhcCC--CCCceEEEEEECCccc-----CCcCHHHHHhhCc
Confidence 99999876 7889999999999998 4579998877654
No 30
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.69 E-value=7.4e-17 Score=142.04 Aligned_cols=104 Identities=20% Similarity=0.228 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---ccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~---~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------------- 57 (286)
.|++|.++++||+++|+++|++++.. ..+|+++++ |. +.|.|+|.+|+||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~ 97 (269)
T 4h2k_A 21 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 97 (269)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEe-CC--CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEE
Confidence 36788899999999999999998865 357899998 53 36899999999999964
Q ss_pred --CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhh
Q 023187 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (286)
Q Consensus 58 --g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~ 113 (286)
|..|||+|++++|++++.|++.+. +++++|.|+|+++||.+. ..|++.+.
T Consensus 98 grG~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~----~~Ga~~~~ 149 (269)
T 4h2k_A 98 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEATA----KDGTIHVV 149 (269)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----TTSHHHHH
T ss_pred eCCcccChHHHHHHHHHHHHHHHhCC--CCCccEEEEEEeccccCc----ccCHHHHH
Confidence 567999999999999999998876 678999999999999842 23888653
No 31
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.68 E-value=8.3e-17 Score=141.63 Aligned_cols=104 Identities=19% Similarity=0.256 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---ccccEEEEEcCCCCCCCEEEeeccCCCCCCC--------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~---~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-------------------- 57 (286)
.|++|.++++||+++|+++|++++.. ..+|+++++ |. +.|.|+|.||+||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~ 97 (268)
T 3t68_A 21 VTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARR-GT--QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLH 97 (268)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEE
T ss_pred CCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEe-CC--CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEE
Confidence 36778899999999999999998643 457999998 54 36899999999999864
Q ss_pred --CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhh
Q 023187 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (286)
Q Consensus 58 --g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~ 113 (286)
|..|||+|++++|++++.|++.+. +++++|.|+|+++||.+. ..|++.+.
T Consensus 98 g~G~~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~----~~Ga~~~~ 149 (268)
T 3t68_A 98 GRGAADMKGSLACMIVAVERFIAEHP--DHQGSIGFLITSDEEGPF----INGTVRVV 149 (268)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCTTSSS----CCHHHHHH
T ss_pred ecCcccchHHHHHHHHHHHHHHHhCC--CCCCcEEEEEEeCCccCc----ccCHHHHH
Confidence 678999999999999999988876 678999999999999842 23887653
No 32
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.67 E-value=3.9e-16 Score=140.10 Aligned_cols=108 Identities=18% Similarity=0.254 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc------------cccEEEEEcCCCCCCCEEEeeccCCCCCCC------------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~------------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------ 57 (286)
|..|.++++||.++|+++|++++++. ..||+++++|. ..+.|++.+|+|+|+.+
T Consensus 44 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~--~~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 121 (309)
T 3tc8_A 44 TAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPE--NSKRVLLFAHWDSRPYSDHDPDPSKHRTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTT--CSSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCC--CCceEEEEecccCCCCCCCCccccCCCcc
Confidence 67899999999999999999987653 36999999985 35899999999999975
Q ss_pred --CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCcc--CCC------CCcchhHhhcc
Q 023187 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR--FQS------TFLGSAALAGI 115 (286)
Q Consensus 58 --g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~--~~~------~~~Gs~~~~~~ 115 (286)
|+.|+++|++++|++++.|++. +++++|.|+|+.+||.+- |.. +++||++++..
T Consensus 122 ~~Ga~D~~sGva~~Le~ar~l~~~----~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~ 185 (309)
T 3tc8_A 122 LDGADDGGSGVGALLEIARQIGQK----APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKN 185 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHS
T ss_pred ccCcccchHhHHHHHHHHHHHHhC----CCCCcEEEEEECccccccccccccccccccchhHHHHHhC
Confidence 8999999999999999999987 478999999999999831 111 12799988654
No 33
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.66 E-value=4e-16 Score=140.23 Aligned_cols=108 Identities=20% Similarity=0.291 Sum_probs=84.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc------------cccEEEEEcCCCCCCCEEEeeccCCCCCCC------------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~------------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------ 57 (286)
|..|.++++||.++|+++|++++++. ..||+++++|. ..+.|++.+|+|+|+.+
T Consensus 46 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~--~~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 123 (314)
T 3gux_A 46 TQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPE--SKKRILLCAHWDSRPYADNDPDPKNHHTP 123 (314)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTT--CSSEEEEEEECCCCC--------------
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCC--CCceEEEEccccCCCcCCCCcccccCCcc
Confidence 67899999999999999999987653 26999999885 35899999999999875
Q ss_pred --CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCcc--CC-------CCCcchhHhhcc
Q 023187 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR--FQ-------STFLGSAALAGI 115 (286)
Q Consensus 58 --g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~--~~-------~~~~Gs~~~~~~ 115 (286)
|+.|+++|++++|++++.|++. +++++|.|+|+.+||.+- +. .+++||++++..
T Consensus 124 ~~GA~D~~sGva~~Le~ar~l~~~----~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~ 188 (314)
T 3gux_A 124 ILGVNDGASGVGVLLEIARQIQKE----QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWART 188 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHS
T ss_pred cCCCcccHHHHHHHHHHHHHHHhC----CCCCcEEEEEECCccccccccccccccccccchhHHHHHhC
Confidence 8999999999999999999987 478999999999999831 00 012789887653
No 34
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.65 E-value=3.3e-16 Score=139.95 Aligned_cols=108 Identities=25% Similarity=0.361 Sum_probs=90.3
Q ss_pred CHHHHHHHHHHHHHHHHcC--CE-EEEcc-------cccEEEEEcCCCCCCCEEEeeccCCCCC---------CCCCCcc
Q 023187 2 SPASVRAGNLIRQWMEDAG--LR-TWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVV---------DAGIFDG 62 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G--~~-v~~~~-------~~nv~a~~~g~~~~~~~l~~~~H~DtV~---------~~g~~D~ 62 (286)
|+.|.++++||+++|+++| ++ ++++. .+||+++++|.....+.|++.+|+|+|| ..|+.|+
T Consensus 39 s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~ 118 (299)
T 1rtq_A 39 TTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDD 118 (299)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTT
T ss_pred CchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccccCCCcCcCCCcccCCCccc
Confidence 6789999999999999986 44 44443 3799999987532347899999999998 3588899
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhccc
Q 023187 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (286)
Q Consensus 63 k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~ 116 (286)
|+|++++|++++.|++.+. +++++|.|+|+++||. |+.||+.++..+
T Consensus 119 ~~g~a~~l~~~~~l~~~~~--~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~~ 165 (299)
T 1rtq_A 119 ASGIAAVTEVIRVLSENNF--QPKRSIAFMAYAAEEV-----GLRGSQDLANQY 165 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGG-----TSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC--CCCceEEEEEECCccC-----CchhHHHHHHhh
Confidence 9999999999999999876 7889999999999998 467999886543
No 35
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.64 E-value=8.8e-16 Score=139.06 Aligned_cols=109 Identities=23% Similarity=0.295 Sum_probs=90.1
Q ss_pred CHHHHHHHHHHHHHHHH--cCCEEEEcc-----------cccEEEEEcCCCCCCCEEEeeccCCCCCCC--------CCC
Q 023187 2 SPASVRAGNLIRQWMED--AGLRTWVDH-----------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------GIF 60 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~--~G~~v~~~~-----------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~--------g~~ 60 (286)
|..+.++++||.++|++ +|++++.+. .+||+++++|. ..+.|++.+|+|+|+.+ |+.
T Consensus 49 s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~--~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~ 126 (329)
T 2afw_A 49 SPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPT--AKRHLVLACHYDSKYFSHWNNRVFVGAT 126 (329)
T ss_dssp SHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTT--SSEEEEEEEECCCCCCCCBTTBCCCCTT
T ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCC--CCcEEEEEEeccCCCcCcccCcCCCCcc
Confidence 45677899999999999 999987653 47999999875 35889999999999976 899
Q ss_pred ccHHHHHHHHHHHHHHHHc--------CCCCCCCcCEEEEEecCCCCccCCC---CCcchhHhhc
Q 023187 61 DGSLGIITAISALKVLKST--------GKLGKLKRPVEVIAFSDEEGVRFQS---TFLGSAALAG 114 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~--------~~~~~~~~~i~li~~~dEE~~~~~~---~~~Gs~~~~~ 114 (286)
|+++|++++|++++.|.+. +. +++++|.|+|+.+||..+|-. |+.||+.++.
T Consensus 127 D~~sGva~~le~ar~l~~~~~~~~~~~g~--~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~ 189 (329)
T 2afw_A 127 DSAVPCAMMLELARALDKKLLSLKTVSDS--KPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAA 189 (329)
T ss_dssp TTHHHHHHHHHHHHHTHHHHHTTC--------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHhhhcccccC--CCCccEEEEEecCcccccccCCCccchhHHHHHH
Confidence 9999999999999999875 34 588999999999999744311 5789998764
No 36
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.54 E-value=2.2e-15 Score=136.94 Aligned_cols=99 Identities=25% Similarity=0.278 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCC----------------C--------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A-------- 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~----------------~-------- 57 (286)
|++|.++++||+++|+++|++++++..+|+++.++|.. +.|.|+|.+|+|+|+. |
T Consensus 14 sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 92 (340)
T 2fvg_A 14 SGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIALKRGRD-SSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILP 92 (340)
T ss_dssp TTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGCT
T ss_pred CCchHHHHHHHHHHHHhhCCEEEEeCCCcEEEEecCCC-CCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCccccccc
Confidence 67899999999999999999999999999999987642 2478999999999981 1
Q ss_pred ----------------------------------------------------C-------------------CCccHHHH
Q 023187 58 ----------------------------------------------------G-------------------IFDGSLGI 66 (286)
Q Consensus 58 ----------------------------------------------------g-------------------~~D~k~gv 66 (286)
| +.|||+|+
T Consensus 93 ~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g~ 172 (340)
T 2fvg_A 93 GKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAGC 172 (340)
T ss_dssp TCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHHH
T ss_pred CCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHHH
Confidence 2 37999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHh
Q 023187 67 ITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (286)
Q Consensus 67 ~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~ 112 (286)
+++|++++.|+ +++++|.|+|+++||.+ +.|++.+
T Consensus 173 a~~l~a~~~l~------~~~~~i~~~~~~~EE~G-----~~G~~~~ 207 (340)
T 2fvg_A 173 SVLIDVLESGV------SPAYDTYFVFTVQEETG-----LRGSAVV 207 (340)
T ss_dssp HHHHHHHHTCC------CCSEEEEEEEECCCC----------CHHH
T ss_pred HHHHHHHHHhh------ccCCcEEEEEEcccccc-----hhhhHHH
Confidence 99999998776 25689999999999983 3577754
No 37
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.53 E-value=2.7e-14 Score=129.00 Aligned_cols=107 Identities=19% Similarity=0.314 Sum_probs=90.7
Q ss_pred CHHHHHHHHHHHHHHHHc--CCEEEEccc-----------ccEEEEEcCCCCCCCEEEeeccCCCCCC-------CCCCc
Q 023187 2 SPASVRAGNLIRQWMEDA--GLRTWVDHL-----------GNVHGRVEGLNASAQALLIGSHLDTVVD-------AGIFD 61 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~--G~~v~~~~~-----------~nv~a~~~g~~~~~~~l~~~~H~DtV~~-------~g~~D 61 (286)
|..+.++++||.++|+++ |++++.+.. .||+++++|.. .+.|++.+|+|+|+. .|+.|
T Consensus 57 S~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~--~~~ivl~aH~Dsv~~~~g~~~~~GA~D 134 (330)
T 3pb6_X 57 SPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRA--ARHLTLACHYDSKLFPPGSTPFVGATD 134 (330)
T ss_dssp SHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTS--SEEEEEEEECCCCCCCTTSCCCCCTTT
T ss_pred CHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCC--CceEEEEeccCCCCCCCCCcCcCCCcC
Confidence 678899999999999999 898887643 69999998863 488999999999973 38899
Q ss_pred cHHHHHHHHHHHHHHHHc-----CCCCCCCcCEEEEEecCCCCccCC-----CCCcchhHhhc
Q 023187 62 GSLGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVRFQ-----STFLGSAALAG 114 (286)
Q Consensus 62 ~k~gv~a~l~a~~~L~~~-----~~~~~~~~~i~li~~~dEE~~~~~-----~~~~Gs~~~~~ 114 (286)
+.+|++++|++++.|.+. +. +++++|.|+|+.+||. |+ .++.||+++++
T Consensus 135 ~asGva~lLe~ar~l~~~~~~~~~~--~~~~~i~fv~~~~EE~--f~~w~~~~gl~GS~~~a~ 193 (330)
T 3pb6_X 135 SAVPCALLLELAQALDLELSRAKKQ--AAPVTLQLLFLDGEEA--LKEWGPKDSLYGSRHLAQ 193 (330)
T ss_dssp THHHHHHHHHHHHHTHHHHHHHHHT--TCSEEEEEEEESCCSC--SSCCSTTSSCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHhhcccC--CCCCcEEEEEEcCccc--ccccCCCCCCccHHHHHH
Confidence 999999999999999873 23 6899999999999997 22 25789998864
No 38
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.49 E-value=2.6e-14 Score=130.35 Aligned_cols=102 Identities=22% Similarity=0.287 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCC----------------CC--------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA-------- 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~----------------~~-------- 57 (286)
|++|.++++||+++|+++|++++++..+|++++++|.. ..|+|+|.||+|||+ .|
T Consensus 22 s~~e~~~~~~l~~~l~~~g~~~~~d~~gnl~a~~~g~~-~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 100 (349)
T 2gre_A 22 SGNTAKIINFIENYVSEWNVETKRNNKGALILTVKGKN-DAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVE 100 (349)
T ss_dssp TTCCHHHHHHHHHHTTTSSSEEEECSSSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTT
T ss_pred CccHHHHHHHHHHHHHHhCCEEEEecCCcEEEEecCCC-CCceEEEEecccccceeEEEECCCCeEEEEecCCCcccccc
Confidence 67789999999999999999999998999999997642 247899999999993 10
Q ss_pred ----------C---------------------------------------------------------------------
Q 023187 58 ----------G--------------------------------------------------------------------- 58 (286)
Q Consensus 58 ----------g--------------------------------------------------------------------- 58 (286)
|
T Consensus 101 ~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i 180 (349)
T 2gre_A 101 GEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYI 180 (349)
T ss_dssp TCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEE
T ss_pred CcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeE
Confidence 0
Q ss_pred ---CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhH
Q 023187 59 ---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAA 111 (286)
Q Consensus 59 ---~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~ 111 (286)
+.|||+|++++|++++.|++.+. +++++|.|+|+++||.+ +.|++.
T Consensus 181 ~gr~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~G-----~~g~~~ 229 (349)
T 2gre_A 181 KSRHLDDKVSVAILLKLIKRLQDENV--TLPYTTHFLISNNEEIG-----YGGNSN 229 (349)
T ss_dssp EESCCTTHHHHHHHHHHHHHHHHHTC--CCSEEEEEEEESCC---------CCCCC
T ss_pred EEeeccchHHHHHHHHHHHHHHhccC--CCCceEEEEEECcccCC-----chhhcc
Confidence 38999999999999999998876 67899999999999983 346654
No 39
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=2.8e-13 Score=121.48 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=81.1
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc------------cccEEEEEcCCCCCCCEEEeeccCCCCCCC------------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~------------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------------ 57 (286)
|....++++||.++|+++|++++.+. ..|||++++|.. .+.|+|.+|+|+++.+
T Consensus 44 S~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~--~~~i~l~aH~Ds~~~~~~~~~~~~~~~~ 121 (309)
T 4fuu_A 44 TKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPES--KKRIALFAHWDTRPWADNDADEKNHHTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCC--CceEEEEeecCCCCCCCCccccccccCC
Confidence 56788999999999999999987542 248999999863 4799999999999754
Q ss_pred --CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCc
Q 023187 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (286)
Q Consensus 58 --g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~ 100 (286)
|+.|+.+|++++|+++|.|.+. +++++|.|+|+.+||.+
T Consensus 122 ~~GA~D~aSG~a~lLE~ar~l~~~----~~~~~i~~~~~~~EE~G 162 (309)
T 4fuu_A 122 ILGANDGASGVGALLEIARLVNQQ----QPELGIDIIFLDAEDYG 162 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSSSCC
T ss_pred cCCcccCchhHHHHHHHHHHHhhc----CCCCceEEEeecccccC
Confidence 8899999999999999999986 57899999999999974
No 40
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.48 E-value=1.8e-13 Score=122.89 Aligned_cols=111 Identities=23% Similarity=0.278 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc------------cccEEEEEcCCCCCCCEEEeeccCCCCCCC------CCCccH
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------GIFDGS 63 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~------------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~------g~~D~k 63 (286)
|....++++||.++|+++|++++.+. ..||||+++|. ..+.|++++|+|+++.+ |+.|+.
T Consensus 28 s~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~--~~~~vvl~aHyDs~~~~~~~~~~GA~Dna 105 (312)
T 4f9u_A 28 SRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQ--AQNFLALACHYDSKYFPNDPGFVGATDSA 105 (312)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTT--SSEEEEEEEECCCCCCTTCTTCCCTTTTH
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCC--CCceEEEEEEEecCCCCCCCCCCCccCCc
Confidence 56788999999999999999987543 24899999985 34789999999998642 899999
Q ss_pred HHHHHHHHHHHHHHHc-----CCCCCCCcCEEEEEecCCCCccCC---CCCcchhHhhccc
Q 023187 64 LGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAGIL 116 (286)
Q Consensus 64 ~gv~a~l~a~~~L~~~-----~~~~~~~~~i~li~~~dEE~~~~~---~~~~Gs~~~~~~~ 116 (286)
+|++++|+++|.|.+. +. +|+++|.|+|+.+||.+.++ .+++||++++..+
T Consensus 106 SGvA~lLElAR~l~~~~~~~~~~--~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~ 164 (312)
T 4f9u_A 106 VPCAILLNTAKTLGAYLQKEFRN--RSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKL 164 (312)
T ss_dssp HHHHHHHHHHHHTHHHHTTGGGS--CSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhccC--CCCceEEEEEecCccccccCCccccccChHHHHHHH
Confidence 9999999999999753 33 58899999999999975321 2478999987643
No 41
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.48 E-value=9.4e-14 Score=127.72 Aligned_cols=102 Identities=22% Similarity=0.315 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCC------------------------
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD------------------------ 56 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~------------------------ 56 (286)
.|+.|.++++||+++|+++|+++++|..+|++++++|.. ..|.|+|.+|+|+|+.
T Consensus 22 ~sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~ 100 (373)
T 1vhe_A 22 IPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAE-NGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVM 100 (373)
T ss_dssp CTTCCHHHHHHHHHHHGGGCSEEEECTTCCEEEEEESST-TSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGT
T ss_pred CCCchHHHHHHHHHHHHhhCCEEEEcCCCcEEEEecCCC-CCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhc
Confidence 378899999999999999999999999999999987752 3589999999999981
Q ss_pred --------------------------------------------C--------------C--------------------
Q 023187 57 --------------------------------------------A--------------G-------------------- 58 (286)
Q Consensus 57 --------------------------------------------~--------------g-------------------- 58 (286)
+ |
T Consensus 101 ~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~g 180 (373)
T 1vhe_A 101 LAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLA 180 (373)
T ss_dssp TTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEE
T ss_pred cCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEe
Confidence 0 1
Q ss_pred -CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHh
Q 023187 59 -IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (286)
Q Consensus 59 -~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~ 112 (286)
+.|||+|++++|++++.|++.+ ++++|.|+|+++||.+ +.|++.+
T Consensus 181 r~~D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~G-----~~G~~~~ 226 (373)
T 1vhe_A 181 KAWDNRIGCAIAIDVLRNLQNTD----HPNIVYGVGTVQEEVG-----LRGAKTA 226 (373)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTSC----CSSEEEEEEESCCTTT-----SHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHHhhcC----CCceEEEEEECCcccC-----hhhHHHH
Confidence 5899999999999999998764 5689999999999983 4577765
No 42
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.45 E-value=4.9e-14 Score=127.49 Aligned_cols=99 Identities=25% Similarity=0.235 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCC----------------CCC-------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DAG------- 58 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~----------------~~g------- 58 (286)
|+.|.++++||+++|+++|+ +++|..+|++++++|. .|.|+|.+|+|+|+ .||
T Consensus 18 sg~e~~~~~~l~~~l~~~g~-~~~d~~gnlia~~~~~---~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 93 (332)
T 2wyr_A 18 SGYEERIREEIIREIKDFAD-YKVDAIGNLIVELGEG---EERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLY 93 (332)
T ss_dssp TTCCHHHHHHHHHHHTTTCC-CEECTTCCEEEEEESS---SEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGTT
T ss_pred CCcHHHHHHHHHHHHhhcCc-EEEcCCCeEEEEecCC---CceEEEEeccCcccEEEEEECCCCeEEEEecCCcChhhcc
Confidence 67899999999999999999 8889999999998762 48999999999994 222
Q ss_pred -----------------------------------------------------------------------------CCc
Q 023187 59 -----------------------------------------------------------------------------IFD 61 (286)
Q Consensus 59 -----------------------------------------------------------------------------~~D 61 (286)
+.|
T Consensus 94 ~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~~~~~~~i~gra~D 173 (332)
T 2wyr_A 94 GRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGKYVSTRGLD 173 (332)
T ss_dssp TEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCEEETTTEEECTTHH
T ss_pred CCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccEEecCCeEEcccCC
Confidence 379
Q ss_pred cHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhh
Q 023187 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (286)
Q Consensus 62 ~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~ 113 (286)
||+|++++|++++.|++.+ ++++|.|+|+++||.+ +.|++.+.
T Consensus 174 ~k~g~a~~l~a~~~l~~~~----~~~~i~~~~~~~EE~G-----~~G~~~~~ 216 (332)
T 2wyr_A 174 DRFGVVALIEAIKDLVDHE----LEGKVIFAFTVQEEVG-----LKGAKFLA 216 (332)
T ss_dssp HHHHHHHHHHHHHTTTTSC----CSSEEEEEEESCGGGT-----SHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhhcC----CCceEEEEEECccccC-----cchHHHHh
Confidence 9999999999999988764 5689999999999983 45777653
No 43
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.39 E-value=1.3e-12 Score=118.23 Aligned_cols=111 Identities=19% Similarity=0.208 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc------------cccEEEEEcCCCCCCCEEEeeccCCCCCCC-----CCCccHH
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA-----GIFDGSL 64 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~------------~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-----g~~D~k~ 64 (286)
|....++++||.++|+++|++++.+. ..||||+++|. ....|++++|+|+++.. |+.|+.+
T Consensus 55 s~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~--~~~~i~l~aHyDs~~~~~~~~~GA~Dnas 132 (330)
T 4fai_A 55 TTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPN--AERYLVLSCHYDSKYMPGVEFLGATDSAV 132 (330)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTT--CSEEEEEEEECCCCCCTTSCCCCTTTTHH
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCC--CCcEEEEEEeecccccccCCCCCCCCccH
Confidence 56788999999999999999987542 14899999875 34689999999998753 8999999
Q ss_pred HHHHHHHHHHHHHHc---CCCCCCCcCEEEEEecCCCCccCC---CCCcchhHhhccc
Q 023187 65 GIITAISALKVLKST---GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAGIL 116 (286)
Q Consensus 65 gv~a~l~a~~~L~~~---~~~~~~~~~i~li~~~dEE~~~~~---~~~~Gs~~~~~~~ 116 (286)
|++++|+++|.|.+. +. +++++|.|+|+.+||.+-.+ -+++||++++..+
T Consensus 133 G~A~lLE~Ar~l~~~~~~~~--~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~~ 188 (330)
T 4fai_A 133 PCAMLLNLAQVLQEQLKPLK--KSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKKW 188 (330)
T ss_dssp HHHHHHHHHHHTHHHHGGGG--TSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhccC--CCCccEEEEEeccccccccccccchhhhhHHHHhcc
Confidence 999999999999753 33 58899999999999974211 1257999988753
No 44
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.38 E-value=4.1e-13 Score=122.51 Aligned_cols=51 Identities=24% Similarity=0.313 Sum_probs=46.4
Q ss_pred CHHH-HHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCC
Q 023187 2 SPAS-VRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (286)
Q Consensus 2 s~~E-~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~ 55 (286)
|++| .+++++|+++|+++|+++++|..+|+++.++|. .|.|+|.+|+|+|+
T Consensus 22 sg~e~~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~---~~~i~l~aH~D~v~ 73 (353)
T 1y0y_A 22 SGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGE---GPKVMIAAHMDQIG 73 (353)
T ss_dssp TTCGGGTHHHHHHHHHGGGSSEEEECTTCCEEEEECCS---SCEEEEEEECCBCE
T ss_pred CccchHHHHHHHHHHHHhhCCeEEEcCCCCEEEEecCC---CccEEEEeccCccc
Confidence 6788 899999999999999999999999999998764 48999999999995
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.34 E-value=2e-12 Score=120.76 Aligned_cols=101 Identities=24% Similarity=0.342 Sum_probs=81.6
Q ss_pred HHHHHHHHHH---H--cCCEEEEcc-----cccEEEEEcCCCC---CCCEEEeeccCCCCCCC-CCCccHHHHHHHHHHH
Q 023187 8 AGNLIRQWME---D--AGLRTWVDH-----LGNVHGRVEGLNA---SAQALLIGSHLDTVVDA-GIFDGSLGIITAISAL 73 (286)
Q Consensus 8 ~~~~l~~~l~---~--~G~~v~~~~-----~~nv~a~~~g~~~---~~~~l~~~~H~DtV~~~-g~~D~k~gv~a~l~a~ 73 (286)
.+++|.++|+ + .+++++.+. ..||+++++|+.+ ..+.|++.+|+|+|+.+ |+.|+++|++++|+++
T Consensus 173 ~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~ 252 (421)
T 2ek8_A 173 EGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELA 252 (421)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHH
Confidence 4667777773 2 234444444 5799999998532 45889999999999988 9999999999999999
Q ss_pred HHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhcccc
Q 023187 74 KVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (286)
Q Consensus 74 ~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (286)
+.|++. +++++|.|+|+.+||. |+.||+.++..+.
T Consensus 253 ~~l~~~----~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~~~ 287 (421)
T 2ek8_A 253 RVMSKL----KTDTELRFITFGAEEN-----GLIGSKKYAASLS 287 (421)
T ss_dssp HHHTTS----CCSSEEEEEEESSSTT-----TSHHHHHHHTTCC
T ss_pred HHHhcc----CCCceEEEEEECCccc-----cchhHHHHHHhCc
Confidence 999875 5789999999999998 5689999987654
No 46
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.33 E-value=1.8e-16 Score=141.24 Aligned_cols=90 Identities=17% Similarity=0.208 Sum_probs=63.3
Q ss_pred CHHHH-HHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCCCC---------------CCCccHHH
Q 023187 2 SPASV-RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------GIFDGSLG 65 (286)
Q Consensus 2 s~~E~-~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~---------------g~~D~k~g 65 (286)
|+.|. ++++||+++|+++|+++++|+.|||+|+++|+ .|.|+|.||+||||.. |..|++..
T Consensus 25 sg~E~~~v~~~l~~~l~~~G~~v~~D~~GNlia~~~g~---~p~lll~~H~Dtvp~~v~~~~~~g~~~~~~~~~~~~~~~ 101 (354)
T 2wzn_A 25 SGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETL 101 (354)
T ss_dssp TTCGGGTHHHHHHHHHHTTSSEEEECTTCCEEEEECCS---SSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGG
T ss_pred CcchHHHHHHHHHHHHHHcCCEEEEeCCCeEEEEECCC---CceEEEEeccccCCCcCCeeecCCceeeccCCCccHHHH
Confidence 67664 68999999999999999999999999999763 5899999999999853 22233222
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCc
Q 023187 66 IITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (286)
Q Consensus 66 v~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~ 100 (286)
++.++..+...+ .+...+.++++.+||..
T Consensus 102 ---~~~~~~~~~~~~---~~~~~~~~~~~~~ee~~ 130 (354)
T 2wzn_A 102 ---VAQRIRFFTEKG---ERYGVVGVLPPHLRRGQ 130 (354)
T ss_dssp ---TTCEEEEEETTE---EEEEEECCCCGGGC---
T ss_pred ---HHHHHHHhhccC---CccceEEEeeeeeEecc
Confidence 222222223333 35567788889999973
No 47
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.28 E-value=8e-12 Score=113.48 Aligned_cols=100 Identities=20% Similarity=0.141 Sum_probs=82.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCC---------------CC---------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV---------------DA--------- 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~---------------~~--------- 57 (286)
|++|.++++||+++|+++|+++++|..+|++++++|. +.|.|+|.||+|||+ .+
T Consensus 21 sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~--~~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g 98 (346)
T 1vho_A 21 SGYETNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGK--GIGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYA 98 (346)
T ss_dssp TTCCHHHHHHHHHHHGGGCSEEEECTTSCEEEEECCS--SSCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CC
T ss_pred CcchHHHHHHHHHHHHhhCCEEEEecCCcEEEEEcCC--CCceEEEEecCcccceEeEEecCCeEEEEEeCCccCccccc
Confidence 6789999999999999999999999999999999774 248999999999994 11
Q ss_pred -------------C---------------------------------------------------------CCccHHHHH
Q 023187 58 -------------G---------------------------------------------------------IFDGSLGII 67 (286)
Q Consensus 58 -------------g---------------------------------------------------------~~D~k~gv~ 67 (286)
| +.|++.|++
T Consensus 99 ~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~a 178 (346)
T 1vho_A 99 SKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCG 178 (346)
T ss_dssp CEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHH
T ss_pred CEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHH
Confidence 0 268899999
Q ss_pred HHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHh
Q 023187 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (286)
Q Consensus 68 a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~ 112 (286)
+++.+++.|++. .++.++.++|+.+||.+ +.|++..
T Consensus 179 a~l~al~~l~~~----~~~~~~~~~~t~~EEvG-----~~Ga~~~ 214 (346)
T 1vho_A 179 VLVKVLEFLKRY----DHPWDVYVVFSVQEETG-----CLGALTG 214 (346)
T ss_dssp HHHHHHHHHTTC----CCSSEEEEEEECTTSSS-----HHHHHHT
T ss_pred HHHHHHHHhhhc----CCCceEEEEEECCcccc-----hhhHHHH
Confidence 999999988765 35578999999999983 3466543
No 48
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.27 E-value=9e-12 Score=113.13 Aligned_cols=100 Identities=22% Similarity=0.269 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCC----------------CC--------
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA-------- 57 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~----------------~~-------- 57 (286)
|++|.++++||+++|+++|+++++|..+|++++++|. +.|.|+|.||+|||+ .|
T Consensus 19 sg~e~~~~~~l~~~l~~~g~~v~~d~~gnlia~~~g~--~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~ 96 (348)
T 1ylo_A 19 ASSEQEVRQILLEEAARLQKEVRFDGLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQ 96 (348)
T ss_dssp TTBCHHHHHHHHHHHHHTTCCEEECTTCCEEEECCCC--SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSS
T ss_pred CCchHHHHHHHHHHHHhhCCEEEEecCCCEEEEecCC--CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhcc
Confidence 6789999999999999999999999999999998764 358999999999995 10
Q ss_pred -------------------------------------------------C--------------------CCccHHHHHH
Q 023187 58 -------------------------------------------------G--------------------IFDGSLGIIT 68 (286)
Q Consensus 58 -------------------------------------------------g--------------------~~D~k~gv~a 68 (286)
| +.|++.|+++
T Consensus 97 g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa 176 (348)
T 1ylo_A 97 LQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYL 176 (348)
T ss_dssp SEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHH
Confidence 0 2688999999
Q ss_pred HHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHh
Q 023187 69 AISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (286)
Q Consensus 69 ~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~ 112 (286)
++.+++.|++. .++.++.++|+.+||.+ +.|++..
T Consensus 177 ~l~al~~l~~~----~~~~~~~~~~t~~EEvG-----~~Ga~~~ 211 (348)
T 1ylo_A 177 LVTLLRELHDA----ELPAEVWLVASSSEEVG-----LRGGQTA 211 (348)
T ss_dssp HHHHHHHHTTC----CCSSEEEEEEESCCTTS-----SHHHHHH
T ss_pred HHHHHHHhhhc----CCCceEEEEEEcccccc-----hhHHHHh
Confidence 99999988765 35678999999999983 3466543
No 49
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.24 E-value=1.1e-11 Score=113.07 Aligned_cols=54 Identities=22% Similarity=0.250 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~ 55 (286)
|+.|.++++||+++|+++|+++++|..+|++++++|..++.|.|+|.+|+|+|+
T Consensus 19 SG~E~~v~~~l~~~l~~~g~~~~~D~~GNli~~~~g~~~~~~~v~l~aHmD~Vg 72 (355)
T 3kl9_A 19 SGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPRVLVASHMDEVG 72 (355)
T ss_dssp TTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCCSTTCCEEEEEEECCBCE
T ss_pred CCCHHHHHHHHHHHHHHhCCEEEECCCCeEEEEECCcCCCCCeEEEEecccccc
Confidence 789999999999999999999999999999999987532468999999999986
No 50
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.20 E-value=1.7e-11 Score=115.19 Aligned_cols=83 Identities=28% Similarity=0.390 Sum_probs=73.5
Q ss_pred cccEEEEEcCCCCCCCEEEeeccCCCCCCC-CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCC
Q 023187 28 LGNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTF 106 (286)
Q Consensus 28 ~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~-g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~ 106 (286)
..||+++++|.....+.|++.+|+|+|+.+ |+.|+++|++++|++++.|++.+. +++++|+|+|+.+||. |+
T Consensus 235 ~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~--~~~~~i~f~~~~~EE~-----gl 307 (444)
T 3iib_A 235 SYNVIAEVKGSTKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQ--KPERTIRVVLYAAEEL-----GL 307 (444)
T ss_dssp EEEEEEEECCSTEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSS--CCSEEEEEEEESCGGG-----TS
T ss_pred eEEEEEEEeCCCCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCC--CCCCeEEEEEECCccc-----CC
Confidence 469999999875335789999999999986 999999999999999999999886 7899999999999998 46
Q ss_pred cchhHhhcccc
Q 023187 107 LGSAALAGILP 117 (286)
Q Consensus 107 ~Gs~~~~~~~~ 117 (286)
.||+.++..+.
T Consensus 308 ~Gs~~~~~~~~ 318 (444)
T 3iib_A 308 LGGKTYAKEHE 318 (444)
T ss_dssp HHHHHHHHHTG
T ss_pred cCHHHHHHhhH
Confidence 89999887654
No 51
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.10 E-value=1.9e-11 Score=110.17 Aligned_cols=91 Identities=18% Similarity=0.060 Sum_probs=74.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc-------cccEEEEEcCCCCCCCEEEeeccCCCCC-----------CCC-----
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVV-----------DAG----- 58 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~-------~~nv~a~~~g~~~~~~~l~~~~H~DtV~-----------~~g----- 58 (286)
|++|.++++||+++|+++|+++++|. .+|+++.++| + |.|+|.+|+|||+ .||
T Consensus 33 sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g---~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~ 108 (321)
T 3cpx_A 33 SGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG---N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKE 108 (321)
T ss_dssp TTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES---S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCT
T ss_pred CCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC---C-ceEEEEecCCcCCeEecccCCeEEcCChhhcc
Confidence 78899999999999999999988787 8999999876 3 7899999999993 211
Q ss_pred ------------------------------------------------------CCccHHHHHHHHHHHHHHHHcCCCCC
Q 023187 59 ------------------------------------------------------IFDGSLGIITAISALKVLKSTGKLGK 84 (286)
Q Consensus 59 ------------------------------------------------------~~D~k~gv~a~l~a~~~L~~~~~~~~ 84 (286)
+.|+|+|+++++++++. + .
T Consensus 109 ~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~-----l--~ 181 (321)
T 3cpx_A 109 GYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWTALELAKT-----L--E 181 (321)
T ss_dssp TCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTT-----C--C
T ss_pred cCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHH-----h--c
Confidence 37999999999988753 2 2
Q ss_pred CCcCEEEEEecCCCCccCCCCCcchhH
Q 023187 85 LKRPVEVIAFSDEEGVRFQSTFLGSAA 111 (286)
Q Consensus 85 ~~~~i~li~~~dEE~~~~~~~~~Gs~~ 111 (286)
. +.++|+++||.+ +.|++.
T Consensus 182 --~-i~~~~t~~EEvG-----~~Ga~~ 200 (321)
T 3cpx_A 182 --H-GIIAFTCWEEHG-----GGSVAY 200 (321)
T ss_dssp --S-EEEEEESSTTTT-----CCSHHH
T ss_pred --C-cEEEEECCccCc-----hhcchh
Confidence 2 999999999984 357764
No 52
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.03 E-value=2.7e-10 Score=103.81 Aligned_cols=51 Identities=20% Similarity=0.352 Sum_probs=47.5
Q ss_pred CHHHH-HHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCC
Q 023187 2 SPASV-RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (286)
Q Consensus 2 s~~E~-~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~ 55 (286)
|+.|. ++++||+++|+++|+++++|+.+|++++++|+ .|.|+|.+|+|+|+
T Consensus 25 SG~E~~~v~~~l~~~l~~~g~~~~~D~~GNvi~~~~g~---~~~v~l~aHmDtVg 76 (354)
T 2vpu_A 25 SGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIG 76 (354)
T ss_dssp TTCGGGTHHHHHHHHHHTTCSEEEECTTCCEEEEECCS---SSEEEEECCCCBCE
T ss_pred CcccHHHHHHHHHHHHHHhCCEEEEcCCCeEEEEEcCC---CCEEEEEecccccc
Confidence 78899 99999999999999999999999999999874 28999999999986
No 53
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.94 E-value=1.3e-09 Score=107.33 Aligned_cols=82 Identities=23% Similarity=0.327 Sum_probs=70.5
Q ss_pred ccccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHH---cCCCCCCCcCEEEEEecCCCCccCC
Q 023187 27 HLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKS---TGKLGKLKRPVEVIAFSDEEGVRFQ 103 (286)
Q Consensus 27 ~~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~---~~~~~~~~~~i~li~~~dEE~~~~~ 103 (286)
...||+++++|.....+.|++++|+|+|+. |+.|+.+|++++|++++.|.+ .+. +++++|+|+++.+||.
T Consensus 311 ~~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-Ga~D~~sG~a~lLe~ar~l~~~~~~g~--~p~r~I~f~~~~~EE~---- 383 (707)
T 3fed_A 311 RIYNVVGTIRGSVEPDRYVILGGHRDSWVF-GAIDPTSGVAVLQEIARSFGKLMSKGW--RPRRTIIFASWDAEEF---- 383 (707)
T ss_dssp EEEEEEEEECCSSEEEEEEEEEEECCCSSS-CTTTTHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGG----
T ss_pred EEEEEEEEEeCCCCCCceEEEeccccCCCC-CCccCcHHHHHHHHHHHHHHhhhhccC--CCCCCEEEEEeCCccc----
Confidence 357999999987433578999999999987 568999999999999999976 466 7899999999999998
Q ss_pred CCCcchhHhhccc
Q 023187 104 STFLGSAALAGIL 116 (286)
Q Consensus 104 ~~~~Gs~~~~~~~ 116 (286)
|+.||+.++..+
T Consensus 384 -Gl~GS~~~~~~~ 395 (707)
T 3fed_A 384 -GLLGSTEWAEEN 395 (707)
T ss_dssp -TSHHHHHHHHHH
T ss_pred -cchhHHHHHHhc
Confidence 578999998754
No 54
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.88 E-value=3.1e-09 Score=96.25 Aligned_cols=51 Identities=20% Similarity=0.241 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcccccEEEEEcCCCCCCCEEEeeccCCCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~~~~~~l~~~~H~DtV~ 55 (286)
|+.|.++++|++++|+++|.++++|+.||+++++ |. +.|.|+|.+|||+|.
T Consensus 27 SG~E~~v~~~i~~~l~~~~~e~~~D~~Gnvi~~~-g~--~~~~v~l~aHmDevG 77 (343)
T 3isx_A 27 SGREEEVRSIILEELEGHIDGHRIDGLGNLIVWK-GS--GEKKVILDAHIDEIG 77 (343)
T ss_dssp TTCCHHHHHHHHHHHTTTCSEEEECTTCCEEEEE-CC--CSSEEEEEEECCBCE
T ss_pred CCchHHHHHHHHHHHHHhCCEEEECCCCCEEEEE-CC--CCCEEEEEecccccc
Confidence 7899999999999999999999999999999998 43 468999999999984
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.84 E-value=4.5e-09 Score=102.45 Aligned_cols=81 Identities=14% Similarity=0.233 Sum_probs=69.6
Q ss_pred cccEEEEEcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHc----CCCCCCCcCEEEEEecCCCCccCC
Q 023187 28 LGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST----GKLGKLKRPVEVIAFSDEEGVRFQ 103 (286)
Q Consensus 28 ~~nv~a~~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~----~~~~~~~~~i~li~~~dEE~~~~~ 103 (286)
..||+++++|+....+.|++++|+|++.+ |+.|+.+|++++|++++.|.+. +. +|+++|.|+++.+||.
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-Ga~D~~sG~a~lLe~ar~l~~~~~~~g~--~p~r~I~f~~~~~EE~---- 338 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGP-GAAKSGVGTALLLKLAQMFSDMVLKDGF--QPSRSIIFASWSAGDF---- 338 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSC-CTTTTHHHHHHHHHHHHHHHHHHHTSCC--CCSEEEEEEEESSGGG----
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCC-CCCcCcHHHHHHHHHHHHHHHhhhhcCC--CCCCcEEEEEECCccc----
Confidence 47999999997323478999999999954 7889999999999999999864 66 7999999999999998
Q ss_pred CCCcchhHhhccc
Q 023187 104 STFLGSAALAGIL 116 (286)
Q Consensus 104 ~~~~Gs~~~~~~~ 116 (286)
|+.||..++...
T Consensus 339 -gl~GS~~~~~~~ 350 (640)
T 3kas_A 339 -GSVGATEWLEGY 350 (640)
T ss_dssp -TSHHHHHHHHHT
T ss_pred -CchhHHHHHHhh
Confidence 578999988754
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=97.07 E-value=0.001 Score=61.02 Aligned_cols=64 Identities=17% Similarity=0.126 Sum_probs=52.6
Q ss_pred EcCCCCCCCEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhc
Q 023187 35 VEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (286)
Q Consensus 35 ~~g~~~~~~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (286)
++|. ..+.|++.+|+|+ ++++.|+.+|++++++.++.|++. +++.+++|+|++ |. .||..+..
T Consensus 174 ipG~--t~~~IllsaH~cH--P~~ANDNaSG~a~lleLar~l~~~----~~~~t~rFvf~p-g~--------iGS~~yl~ 236 (435)
T 3k9t_A 174 IRGE--LEEEILLTTYTCH--PSMCNDNLSGVALITFIAKALSKL----KTKYSYRFLFAP-ET--------IGSITWLS 236 (435)
T ss_dssp ECCS--SSCEEEEEEECCC--CSCTTTTHHHHHHHHHHHHHHTTS----CCSSEEEEEEEC-TT--------HHHHHHHH
T ss_pred ecCC--CCCEEEEEEEcCC--CCCCCccchHHHHHHHHHHHHhcC----CCCceEEEEEcC-cc--------HHHHHHHH
Confidence 4885 3589999999997 457999999999999999999864 688999999998 22 38887765
Q ss_pred c
Q 023187 115 I 115 (286)
Q Consensus 115 ~ 115 (286)
.
T Consensus 237 ~ 237 (435)
T 3k9t_A 237 R 237 (435)
T ss_dssp H
T ss_pred h
Confidence 3
No 57
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=93.22 E-value=0.033 Score=51.53 Aligned_cols=53 Identities=25% Similarity=0.334 Sum_probs=41.7
Q ss_pred CHHHHHHHHHHHHHHHHcCC---------------EEEEccc-ccEEEEEcCCC--CCCCEEEeeccCCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGL---------------RTWVDHL-GNVHGRVEGLN--ASAQALLIGSHLDTV 54 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~---------------~v~~~~~-~nv~a~~~g~~--~~~~~l~~~~H~DtV 54 (286)
|+.++.+.++++++|++.|| ++.+++. +|++|...|.. ...+.+++.+|+|++
T Consensus 15 ~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 15 SPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp THHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 57799999999999999998 3556666 78999877753 124689999999995
No 58
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=92.27 E-value=0.083 Score=49.30 Aligned_cols=52 Identities=13% Similarity=0.049 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCE-------------EEEcccccEEEEEc-CCCC--CCCEEEeeccCCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLR-------------TWVDHLGNVHGRVE-GLNA--SAQALLIGSHLDTV 54 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~-------------v~~~~~~nv~a~~~-g~~~--~~~~l~~~~H~DtV 54 (286)
|+.++.+.++++++|++.||. +.+++.+|+++.+. |.++ .... ++.+|+|+.
T Consensus 32 spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dsp 99 (458)
T 1y7e_A 32 FKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSP 99 (458)
T ss_dssp CCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcC
Confidence 566889999999999999975 66777788666554 5422 2344 899999995
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=89.71 E-value=0.41 Score=44.44 Aligned_cols=53 Identities=9% Similarity=0.102 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCE-------------EEEccc-ccEEEEEcCCCCCCCEEEeeccCCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLR-------------TWVDHL-GNVHGRVEGLNASAQALLIGSHLDTV 54 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~-------------v~~~~~-~nv~a~~~g~~~~~~~l~~~~H~DtV 54 (286)
|+.++.+.+++++.|++.||. +.+++. +|++|...|.....+.+++.+|+|.+
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 456899999999999999984 223444 58999876652224689999999985
No 60
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=79.96 E-value=0.29 Score=45.62 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHcCCE-----------------EEEccccc-EEEEEcCCCC-CCCEEEeeccCCCC
Q 023187 3 PASVRAGNLIRQWMEDAGLR-----------------TWVDHLGN-VHGRVEGLNA-SAQALLIGSHLDTV 54 (286)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-----------------v~~~~~~n-v~a~~~g~~~-~~~~l~~~~H~DtV 54 (286)
+.++.+.++++++|++.||+ +.+++.+| ++|...|.++ ....+++.+|+|++
T Consensus 35 pt~~hav~~~~~~l~~sGfe~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 35 KTERECVTELIKTAEKSGYRNIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp HCCSSTHHHHHHHSCCSSCCCTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCChhHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 34556778888888888886 22334467 8887666431 12459999999985
No 61
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=65.68 E-value=49 Score=30.85 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHc-CCEEEEcc--------c-------------cc-EEEEEcCCCCCCCEEEeecc---CCC-----CC
Q 023187 7 RAGNLIRQWMEDA-GLRTWVDH--------L-------------GN-VHGRVEGLNASAQALLIGSH---LDT-----VV 55 (286)
Q Consensus 7 ~~~~~l~~~l~~~-G~~v~~~~--------~-------------~n-v~a~~~g~~~~~~~l~~~~H---~Dt-----V~ 55 (286)
..+++.++.++++ |+++++-. . +- |..+|.|..+..++|.|.|- +|| -|
T Consensus 201 ~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp 280 (497)
T 3h8g_F 201 FLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKADKPFVLVGKGITFDTGGISLKP 280 (497)
T ss_dssp HHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTTSCCEEEEEEEEEEECCTTSCCC
T ss_pred HHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCCCCcEEEEcCceEeccCCccCCC
Confidence 3566777888888 99987621 1 11 44455554333455655543 232 22
Q ss_pred CCCCCccH---HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 56 DAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 56 ~~g~~D~k---~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
..+-.+|| +|-++.+.+++.+.+.+ ++-+|..+.-..|-.
T Consensus 281 ~~~M~~Mk~DM~GAAaV~g~~~a~a~l~----l~vnv~~~i~~~ENm 323 (497)
T 3h8g_F 281 GAGMDEMKYDMCGAASVFGTLRAVLELQ----LPVNLVCLLACAENM 323 (497)
T ss_dssp STTGGGGGGTTHHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEEC
T ss_pred ccchhhccccchHHHHHHHHHHHHHHcC----CCeEEEEEEEeeccC
Confidence 22222232 67778899999999885 557888888888764
No 62
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=62.57 E-value=43 Score=31.29 Aligned_cols=84 Identities=11% Similarity=0.043 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHcCCEEEEc-c-------ccc--------------EEEEEcCCCCCCCEEEeecc---CCCCCCCCCC-
Q 023187 7 RAGNLIRQWMEDAGLRTWVD-H-------LGN--------------VHGRVEGLNASAQALLIGSH---LDTVVDAGIF- 60 (286)
Q Consensus 7 ~~~~~l~~~l~~~G~~v~~~-~-------~~n--------------v~a~~~g~~~~~~~l~~~~H---~DtV~~~g~~- 60 (286)
..++++++.++++|+++++- . .+- +...|.|.....++|.|.|- +|| |+.
T Consensus 225 ~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~~iaLVGKGITFDS----GGls 300 (522)
T 4efd_A 225 TFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVKKVSLVGKGIVYDC----GGLA 300 (522)
T ss_dssp HHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSEEEEEEEEEEETCC----CCSS
T ss_pred HHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCCcEEEecCceEeec----CCcc
Confidence 45677778888899998752 1 111 33444443222355555543 232 332
Q ss_pred ------------ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 61 ------------DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 61 ------------D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
|| +|-++.+.+++.+.+.+ ++.+|..+.-..|-.
T Consensus 301 LKp~~~M~~MK~DM-gGAAaVlga~~a~a~l~----lpvnV~~vl~~~ENm 346 (522)
T 4efd_A 301 LKPADYMKLMKHDM-GGAAAVFCGFLTAVRLQ----QPVQLSCTLCLAENA 346 (522)
T ss_dssp SCHHHHHHHGGGTT-HHHHHHHHHHHHHHHHT----CSEEEEEEEEEEECC
T ss_pred CCCccchhhccccc-chHHHHHHHHHHHHHcC----CCceEEEEEEEeccC
Confidence 44 56677788888888885 567888888888764
No 63
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=59.72 E-value=69 Score=29.89 Aligned_cols=89 Identities=13% Similarity=0.093 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHcC--CEEEEcc--------c-------------cc-EEEEEcCCCC-CCCEEEeecc---CCC-----
Q 023187 7 RAGNLIRQWMEDAG--LRTWVDH--------L-------------GN-VHGRVEGLNA-SAQALLIGSH---LDT----- 53 (286)
Q Consensus 7 ~~~~~l~~~l~~~G--~~v~~~~--------~-------------~n-v~a~~~g~~~-~~~~l~~~~H---~Dt----- 53 (286)
..+++.++.++++| ++|++-. . +- |..+|.|..+ ..++|.|.|- +||
T Consensus 202 ~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~~~~~~i~LVGKGITFDsGGisl 281 (503)
T 1gyt_A 202 YLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISI 281 (503)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCCTTCCCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCCCCCCcEEEEcCceEecCCCccc
Confidence 35667777778889 9887621 1 11 4455555332 2355555533 232
Q ss_pred CCCCCCCccH---HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 54 VVDAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 54 V~~~g~~D~k---~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
=|..+-.+|| +|-|+.+.+++.+.+.+ ++-+|..+.-..|-.
T Consensus 282 Kp~~~M~~MK~DM~GAAaVlg~~~aia~l~----l~vnV~~~i~~~ENm 326 (503)
T 1gyt_A 282 KPSEGMDEMKYDMCGAAAVYGVMRMVAELQ----LPINVIGVLAGCENM 326 (503)
T ss_dssp CCSTTGGGGGGGGHHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEEC
T ss_pred cCCcChhhcccccchHHHHHHHHHHHHHcC----CCeeEEEEEEeeccC
Confidence 2222322332 57778899999999885 558898888888765
No 64
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=57.75 E-value=30 Score=32.38 Aligned_cols=88 Identities=13% Similarity=0.140 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHcCCEEEEcc--------c-------------cc-EEEEEcCCCCCCCEEEeecc---CCC-----CCC
Q 023187 7 RAGNLIRQWMEDAGLRTWVDH--------L-------------GN-VHGRVEGLNASAQALLIGSH---LDT-----VVD 56 (286)
Q Consensus 7 ~~~~~l~~~l~~~G~~v~~~~--------~-------------~n-v~a~~~g~~~~~~~l~~~~H---~Dt-----V~~ 56 (286)
..++++++.+++.|+++++-. . +- +..+|.|..+..++|.|.|- +|| -|.
T Consensus 218 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp~ 297 (515)
T 3kzw_A 218 TFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEAPIALVGKGITYDSGGYSIKTK 297 (515)
T ss_dssp HHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSCCCEEEEEEEEEEECCTTSCCCH
T ss_pred HHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCCCcEEEecCceEEecCCcCCCCc
Confidence 345666677778899987621 1 11 34445444333455555543 222 010
Q ss_pred CC----CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 57 AG----IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 57 ~g----~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
.+ ..|| +|-|+.+.+++.+.+.+ ++-+|..+.-..|-.
T Consensus 298 ~~M~~MK~DM-~GAAaVlg~~~a~a~l~----lpvnv~~~i~~~ENm 339 (515)
T 3kzw_A 298 NGMATMKFDM-CGAANVVGIIEAASRLQ----LPVNIVGVLACAENM 339 (515)
T ss_dssp HHHTTGGGGG-HHHHHHHHHHHHHHHTT----CSCEEEEEEEEEEEC
T ss_pred cChhhchhch-HHHHHHHHHHHHHHHcC----CCceEEEEEEeeccC
Confidence 01 1244 67778899999999885 557888888888764
No 65
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=56.34 E-value=50 Score=30.68 Aligned_cols=88 Identities=16% Similarity=0.116 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHc-CCEEEEcc--------c-------------cc-EEEEEcCCCCCCCEEEeecc---CCC-----CC
Q 023187 7 RAGNLIRQWMEDA-GLRTWVDH--------L-------------GN-VHGRVEGLNASAQALLIGSH---LDT-----VV 55 (286)
Q Consensus 7 ~~~~~l~~~l~~~-G~~v~~~~--------~-------------~n-v~a~~~g~~~~~~~l~~~~H---~Dt-----V~ 55 (286)
..+++.++.++++ |+++++-. . +- |..+|.|..+..++|.|.|- +|| -|
T Consensus 185 ~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp 264 (486)
T 3pei_A 185 YMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEGDAPIVLVGKGLVFDNGGICIKQ 264 (486)
T ss_dssp HHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTTSCCEEEEEEEEETEECC-----
T ss_pred HHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCCCCcEEEEccceEEecCCcccCC
Confidence 3566777777888 89887621 1 11 44455553333455555543 232 11
Q ss_pred CCCC----CccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 56 DAGI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 56 ~~g~----~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
..+- .|| +|-++.+.+++.+.+.+ ++-+|..+.-..|-.
T Consensus 265 ~~~M~~Mk~DM-~GAAaVlg~~~a~a~l~----l~vnv~~~i~~~ENm 307 (486)
T 3pei_A 265 AAGMDSMKMDM-GGVAAVMGTMKAIAMLN----LPVNVVGVMGLAENA 307 (486)
T ss_dssp -------EECS-HHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEC-
T ss_pred ccchhhhhccc-hHHHHHHHHHHHHHHcC----CCcEEEEEEEeeccC
Confidence 1121 244 67778899999999885 557888888888764
No 66
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=55.33 E-value=94 Score=28.84 Aligned_cols=89 Identities=16% Similarity=0.096 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHcC--CEEEEcc--------c-------------cc-EEEEEcCCC-CCCCEEEeecc---CCC-----
Q 023187 7 RAGNLIRQWMEDAG--LRTWVDH--------L-------------GN-VHGRVEGLN-ASAQALLIGSH---LDT----- 53 (286)
Q Consensus 7 ~~~~~l~~~l~~~G--~~v~~~~--------~-------------~n-v~a~~~g~~-~~~~~l~~~~H---~Dt----- 53 (286)
..+++.++.++++| +++++-. . +- |..+|.|.. +..++|.|.|- +||
T Consensus 182 ~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~~~i~LVGKGITFDsGG~sl 261 (484)
T 1lam_A 182 KFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPNASEPPLVFVGKGITFDSGGISI 261 (484)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSSTTSCCEEEEECEEEEECCTTSC
T ss_pred HHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCCCCCCCcEEEEecceEEcCCCcCC
Confidence 35667777778889 8887621 1 11 444554432 12234555533 222
Q ss_pred CCCCCCCccH---HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 54 VVDAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 54 V~~~g~~D~k---~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
-|..+-..|| +|-|+.+.+++.+.+.+ ++-+|..+.-..|-.
T Consensus 262 Kp~~~M~~MK~DMgGAAaVlg~~~aia~l~----l~vnv~~~i~~~ENm 306 (484)
T 1lam_A 262 KAAANMDLMRADMGGAATICSAIVSAAKLD----LPINIVGLAPLCENM 306 (484)
T ss_dssp CCSTTGGGGGGTTHHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEEC
T ss_pred cCccchhhhhccchHHHHHHHHHHHHHHcC----CCeeEEEEEEeeccC
Confidence 2222222232 57778899999999885 567888888888765
No 67
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=54.95 E-value=1.3e+02 Score=28.03 Aligned_cols=88 Identities=16% Similarity=0.099 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHcCCEEEEcc--------cc-------------c-EEEEEcCCCCCCCEEEeecc---CCC-----CCC
Q 023187 7 RAGNLIRQWMEDAGLRTWVDH--------LG-------------N-VHGRVEGLNASAQALLIGSH---LDT-----VVD 56 (286)
Q Consensus 7 ~~~~~l~~~l~~~G~~v~~~~--------~~-------------n-v~a~~~g~~~~~~~l~~~~H---~Dt-----V~~ 56 (286)
..+++..+.+++.|+++++.. .+ - +...|.|.. +.++|.|.|- +|| -|.
T Consensus 188 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~-~~~~i~LVGKGiTFDsGG~slKp~ 266 (491)
T 2hc9_A 188 ALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPG-STEHIALVGKGVVYDTGGLQIKTK 266 (491)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTT-CSCEEEEEEEEEEEECCTTSCCCT
T ss_pred HHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCC-CCCcEEEEcCceEecCCCccCCCC
Confidence 456777778888999987621 11 1 334444432 2345555533 222 222
Q ss_pred CCCCccH---HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 57 AGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 57 ~g~~D~k---~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
++-..|| +|-|+.+.+++.+.+.+ ++.+|..+.-..|-.
T Consensus 267 ~~M~~Mk~DM~GAAaVlg~~~a~a~l~----l~vnv~~~l~~~ENm 308 (491)
T 2hc9_A 267 TGMPNMKRDMGGAAGMLEAYSALVKHG----FSQTLHACLCIVENN 308 (491)
T ss_dssp TTSTTGGGGGHHHHHHHHHHHHHHTTT----CCSEEEEEEEEEEEC
T ss_pred cChhhccccccHHHHHHHHHHHHHHcC----CCceEEEEEEeeecC
Confidence 2222232 67778899999998875 567888888888765
No 68
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=48.57 E-value=1.1e+02 Score=28.32 Aligned_cols=88 Identities=15% Similarity=0.128 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHc-CCEEEEcc--------c-------------cc-EEEEEcCCCCCCCEEEeecc---CCC-----CC
Q 023187 7 RAGNLIRQWMEDA-GLRTWVDH--------L-------------GN-VHGRVEGLNASAQALLIGSH---LDT-----VV 55 (286)
Q Consensus 7 ~~~~~l~~~l~~~-G~~v~~~~--------~-------------~n-v~a~~~g~~~~~~~l~~~~H---~Dt-----V~ 55 (286)
..+++.++.+++. |+++++-. . +- +..+|.|.. ..++|.|.|- +|| -|
T Consensus 197 ~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~-~~~~i~LVGKGiTFDsGG~slKp 275 (490)
T 3jru_B 197 YLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGG-DARPYVLVGKGITFDTGGVNLKT 275 (490)
T ss_dssp HHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTT-TSCCEEEEECEEEEECCTTSCCC
T ss_pred HHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCC-CCCcEEEEcCeeEecCCCccCCC
Confidence 3456666777676 88887521 1 11 444555543 3455555543 232 22
Q ss_pred CCCCCccH---HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 56 DAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 56 ~~g~~D~k---~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
..+-..|| +|-++.+.+++.+.+.+ ++-+|..+.-..|-.
T Consensus 276 ~~~M~~Mk~DM~GAAaV~g~~~a~a~l~----l~vnv~~~i~~~ENm 318 (490)
T 3jru_B 276 QGGIEEMKYDMCGGATVIGTFVATVKAE----LPINLVVVVPAVENA 318 (490)
T ss_dssp SSCGGGGGGGGHHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEEC
T ss_pred cccHhhCcccchHHHHHHHHHHHHHHcC----CCcEEEEEEEeeccC
Confidence 22222232 67778899999999885 567888888888764
No 69
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=47.51 E-value=9.2 Score=35.45 Aligned_cols=39 Identities=21% Similarity=0.109 Sum_probs=30.2
Q ss_pred CCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCcc
Q 023187 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (286)
Q Consensus 57 ~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~ 101 (286)
+.+.|++.++.++|.+++.++ .+..++.++|+..||.+.
T Consensus 257 s~~lDdr~~~~~~l~al~~~~------~~~~~~~~~~~d~EEVGs 295 (461)
T 2glj_A 257 GYGQDDRICAYTSFEAMLEMK------NAKKTCITILVDKEEVGS 295 (461)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC------SCSSCEEEEEECCGGGTC
T ss_pred EecchhHHHHHHHHHHHHhhc------cCCCeEEEEEEccCCCCC
Confidence 356789999998888876432 356789999999999843
No 70
>2zvy_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell inner membrane, cell membrane, flagellar rotation, membrane; 1.75A {Salmonella typhimurium} PDB: 2zvz_A
Probab=43.59 E-value=60 Score=25.74 Aligned_cols=52 Identities=17% Similarity=0.127 Sum_probs=36.6
Q ss_pred EEEeeccCCCCCCCC----CCccHHHHHHHHHHHHHHHHcCCCCCCCcCE-EEEEecCCC
Q 023187 44 ALLIGSHLDTVVDAG----IFDGSLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSDEE 98 (286)
Q Consensus 44 ~l~~~~H~DtV~~~g----~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i-~li~~~dEE 98 (286)
.|.+.||.|.+|... .+....+..=+..+.++|.+.|+ +...| .+....+..
T Consensus 92 ~I~I~GHTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi---~~~ri~~~~G~G~~~ 148 (183)
T 2zvy_A 92 RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGL---DNGKVLRVVGMAATM 148 (183)
T ss_dssp CEEEEEECCSSCTTCSTTSSCHHHHHHHHHHHHHHHHHHTTC---CTTCEEEEEECTTTT
T ss_pred eEEEEEEeCCCCCccccccccHHHHHHHHHHHHHHHHHHcCC---CHHHhheeEEecccC
Confidence 799999999998732 13345666666788889988886 44567 566665544
No 71
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=41.23 E-value=22 Score=32.21 Aligned_cols=26 Identities=27% Similarity=0.329 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcc
Q 023187 2 SPASVRAGNLIRQWMEDAGLRTWVDH 27 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v~~~~ 27 (286)
|..+.++++|++++|+++|++++.+.
T Consensus 34 s~g~~~a~~yi~~~~~~~Gl~~~~q~ 59 (421)
T 2ek8_A 34 SPEELKAVRYIEQQFKSYGYHVEVQP 59 (421)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHCCCceEEEE
Confidence 56789999999999999999876554
No 72
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=39.28 E-value=20 Score=33.00 Aligned_cols=38 Identities=29% Similarity=0.193 Sum_probs=30.1
Q ss_pred CCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCcc
Q 023187 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (286)
Q Consensus 57 ~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~ 101 (286)
+.+.|+..++.++|.+++.+ . +..++.++++..||.+.
T Consensus 245 ~~~lDnr~~~~~~l~al~~~---~----~~~~~~~~~~d~EEVGs 282 (450)
T 2glf_A 245 AYGQDDRICAYTALRALLSA---N----PEKSIGVIFFDKEEIGS 282 (450)
T ss_dssp ETTHHHHHHHHHHHHHHHHC---C----CSSCEEEEEESCGGGTS
T ss_pred EecchhhHHHHHHHHHHHhc---C----CCceEEEEEEcccccCC
Confidence 46789999999888887654 2 45689999999999843
No 73
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=38.39 E-value=2.5e+02 Score=26.23 Aligned_cols=89 Identities=8% Similarity=0.025 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHcCCEEEEcc--------c-------------cc-EEEEEcCCCCCCCEEEeecc---CCC-----CCCC
Q 023187 8 AGNLIRQWMEDAGLRTWVDH--------L-------------GN-VHGRVEGLNASAQALLIGSH---LDT-----VVDA 57 (286)
Q Consensus 8 ~~~~l~~~l~~~G~~v~~~~--------~-------------~n-v~a~~~g~~~~~~~l~~~~H---~Dt-----V~~~ 57 (286)
.++..++..+++|+++++-. . +- +...|.|.....++|.|.|- +|| -|..
T Consensus 227 lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~~iaLVGKGITFDsGG~slKp~~ 306 (528)
T 3kr4_A 227 LSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKKKIALVGKGITFDSGGYNLKAAP 306 (528)
T ss_dssp HHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCEEEEEEEEEEEEECCTTSCSCST
T ss_pred HHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCCcEEEecCceEeecCCcccCCCC
Confidence 45566667778899987621 1 11 44455554333456666543 333 2322
Q ss_pred CC--CccH---HHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 58 GI--FDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 58 g~--~D~k---~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
|. ..|| +|-|+.+.+++.+.+.+. ++-+|..+.-..|-.
T Consensus 307 g~~M~~MK~DM~GAAaVlg~~~aia~l~~---~~vnv~~vi~~~ENm 350 (528)
T 3kr4_A 307 GSMIDLMKFDMSGCAAVLGCAYCVGTLKP---ENVEIHFLSAVCENM 350 (528)
T ss_dssp TCCGGGGGGGGHHHHHHHHHHHHHHHHCC---SSEEEEEEEEEEEEC
T ss_pred CcCHHHhhcCcchHHHHHHHHHHHHhcCC---CCceEEEEEEeeccC
Confidence 31 2232 566778888888888752 346788877777764
No 74
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=37.43 E-value=27 Score=31.94 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHHHHcCC-EEEEcc
Q 023187 2 SPASVRAGNLIRQWMEDAGL-RTWVDH 27 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~-~v~~~~ 27 (286)
|..+.++++|+.++|+++|+ +++.+.
T Consensus 41 S~g~~~a~~~i~~~l~~~G~~~v~~q~ 67 (444)
T 3iib_A 41 SEQDKVAVDWAIAKLQSLGFDRVYKEP 67 (444)
T ss_dssp SHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHcCCCceEeee
Confidence 67899999999999999999 676543
No 75
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* 3imp_B
Probab=34.74 E-value=94 Score=23.14 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=36.7
Q ss_pred CEEEeeccCCCCCCC-CCC--ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 43 QALLIGSHLDTVVDA-GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~-g~~--D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
..|.+.||.|..+.. +.+ ....+..=+..+.++|.+.|+ +...|.+....+.+
T Consensus 37 ~~i~I~GhtD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 92 (138)
T 3cyp_B 37 VHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV---NPNQLSFSSYGSTN 92 (138)
T ss_dssp CEEEEEEECCCCCC----CCSHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEECTTCS
T ss_pred cEEEEEEecCCCCcccccchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECccC
Confidence 579999999998642 223 445666667788889998886 55678776665554
No 76
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=34.47 E-value=8 Score=35.81 Aligned_cols=38 Identities=13% Similarity=0.068 Sum_probs=29.4
Q ss_pred CCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCc
Q 023187 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (286)
Q Consensus 58 g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~ 100 (286)
.+.|++.++.++|.+++.+++ .+..++.++|+..||.+
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~-----~~~~~~~~~~~d~EEVG 289 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE-----TPNKTAICFLVDKEEIG 289 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC-----CCSSCEECCCBCSTTC-
T ss_pred ecCccHHHHHHHHHHHHhhhc-----cCCceEEEEEEcccccC
Confidence 567899999988888765432 25678999999999984
No 77
>2zov_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell projection, flagellar rotation, inner membrane, membrane; 2.00A {Salmonella typhimurium}
Probab=33.17 E-value=84 Score=25.51 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=36.0
Q ss_pred EEEeeccCCCCCCCCC----CccHHHHHHHHHHHHHHHHcCCCCCCCcCE-EEEEecCCC
Q 023187 44 ALLIGSHLDTVVDAGI----FDGSLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSDEE 98 (286)
Q Consensus 44 ~l~~~~H~DtV~~~g~----~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i-~li~~~dEE 98 (286)
.|.+.||.|.+|...+ +....+..=+..+.++|.+.|+ +...| .+....+..
T Consensus 103 ~I~I~GHTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~~G~G~~~ 159 (210)
T 2zov_A 103 RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGL---DNGKVLRVVGMAATM 159 (210)
T ss_dssp CEEEEEEEECSCCCSSCSSCCHHHHHHHHHHHHHHHHHHTTC---CTTCEEEEEEECCC-
T ss_pred eEEEEEEeCCCCCCCcccccchHHHHHHHHHHHHHHHHHcCC---CHHHeeeEEEecccC
Confidence 6999999999987321 3345666666788889988886 44566 566665544
No 78
>3khn_A MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str}
Probab=31.71 E-value=1.2e+02 Score=23.49 Aligned_cols=54 Identities=15% Similarity=0.233 Sum_probs=37.8
Q ss_pred CEEEeeccCCCCC-CC-CCC--ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 43 QALLIGSHLDTVV-DA-GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 43 ~~l~~~~H~DtV~-~~-g~~--D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
-.|.+.||.|.++ .. ..+ ....+..=+..+.++|.+.|+ +...|.+....+.+.
T Consensus 83 ~~i~I~GhTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~P 140 (174)
T 3khn_A 83 QNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGI---EPARLTATGLGELDP 140 (174)
T ss_dssp CEEEEEEECCSCCCCTTSSCSSHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEEEETSSC
T ss_pred CeEEEEEEeCCCCCcCCCCchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEEcCcCC
Confidence 4699999999987 22 222 445666667788889998886 556687776665553
No 79
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=29.14 E-value=13 Score=33.98 Aligned_cols=48 Identities=19% Similarity=0.127 Sum_probs=33.3
Q ss_pred CCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCCccCCCCCcchhHhhccc
Q 023187 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (286)
Q Consensus 57 ~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~ 116 (286)
+.+.|++.++.++|.+++.++ . ...++.++| ..||.+ ..|+......+
T Consensus 231 s~~lDdr~~~~~~l~al~~~~--~----~~~~v~~~f-d~EEVG-----s~ga~gA~s~~ 278 (428)
T 2ijz_A 231 GARLDNLLSCHAGLEALLNAE--G----DENCILVCT-DHEEVG-----SCSHCGADGPF 278 (428)
T ss_dssp CCCSSCSSTTTTTTTHHHHTT--S----CSSSCEEEE-CBSCTT-----TTCHHHHSSCC
T ss_pred eecCccHHHHHHHHHHHHhcc--c----CCceEEEEE-eccccC-----ccchhhhhccc
Confidence 456799999998888887654 2 456788888 999984 34655444433
No 80
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=27.93 E-value=30 Score=32.31 Aligned_cols=43 Identities=19% Similarity=0.069 Sum_probs=28.5
Q ss_pred CCCCccHHHHHHHHHHHHHHHHcC--CCCCCCcCEEEEEecCCCCc
Q 023187 57 AGIFDGSLGIITAISALKVLKSTG--KLGKLKRPVEVIAFSDEEGV 100 (286)
Q Consensus 57 ~g~~D~k~gv~a~l~a~~~L~~~~--~~~~~~~~i~li~~~dEE~~ 100 (286)
+.+.|+..++.++|.+++.+.+.. ....+...+ ++++..||.+
T Consensus 281 s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v-~v~~dqEEVG 325 (496)
T 3vat_A 281 APRLDNLHSCFCALQALIDSCSAPASLAADPHVRM-IALYDNEEVG 325 (496)
T ss_dssp ETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEE-EEEESCGGGT
T ss_pred eeccccHHHHHHHHHHHHhhhccccccccCCCcEE-EEEEccCCcC
Confidence 466799999998898887664310 000123344 8999999984
No 81
>2o8m_C Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 2obq_B 3lon_B* 1n1l_C* 1rtl_C* 2a4g_B* 1a1r_C* 2a4q_B* 2f9u_B* 2f9v_B* 2fm2_B* 2gvf_B* 2obo_B* 2a4r_B* 2oc1_B* 2oc7_B* 2oc8_B* 2xcf_C* 2xcn_C* 2xni_C* 3eyd_B* ...
Probab=27.62 E-value=55 Score=17.26 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=16.9
Q ss_pred eEEEEEEEeecCCccceecCeE
Q 023187 252 LVCTVGEISSWPSASNVIPGEI 273 (286)
Q Consensus 252 ~~~~~g~i~~g~~~~NvIP~~~ 273 (286)
.+..+|.|+.+ +..-++||+=
T Consensus 4 ~VvIvGri~l~-gkp~v~Pdre 24 (26)
T 2o8m_C 4 CVVIVGRIVLS-GKPAIIPKKX 24 (26)
T ss_dssp CBEEEEEEECS-CCCEECCCC-
T ss_pred eEEEEEEEEEC-CceEEcCCcC
Confidence 35679999988 8899999973
No 82
>3s0y_A Motility protein B; peptidoglycan binding, flagellar rotation, chemotaxis, bacte flagellar motor, membrane, motor protein; 1.80A {Helicobacter pylori} PDB: 3s0w_A
Probab=27.06 E-value=1.7e+02 Score=23.13 Aligned_cols=52 Identities=13% Similarity=0.074 Sum_probs=37.1
Q ss_pred EEEeeccCCCCCCCC---CCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 44 ALLIGSHLDTVVDAG---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 44 ~l~~~~H~DtV~~~g---~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
.|.+.||.|.++..+ .+....+..=+.++.++|.+.|+ +...|.+....+.+
T Consensus 93 ~i~I~GhTD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 147 (193)
T 3s0y_A 93 HINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV---NPNQLSFSSYGSTN 147 (193)
T ss_dssp EEEEEECCCSCCCTTSSCSCHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEECTTSC
T ss_pred EEEEEEEeCCCCCccccchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECCcC
Confidence 799999999986532 23445666667788889998886 55667776665544
No 83
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=25.87 E-value=1.4e+02 Score=28.32 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=33.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-E-Ecc----c---------c-cEEEEEcCCC--CCCC-EEEeeccCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLRT-W-VDH----L---------G-NVHGRVEGLN--ASAQ-ALLIGSHLDT 53 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v-~-~~~----~---------~-nv~a~~~g~~--~~~~-~l~~~~H~Dt 53 (286)
|+.++.+.++++++|++.||.- . .+. . + .|+|..-|.. +... --++.+|.|+
T Consensus 20 spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDS 90 (571)
T 4eme_A 20 SGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDS 90 (571)
T ss_dssp CCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccC
Confidence 4568999999999999999953 1 110 1 1 2555443432 2223 4688999998
No 84
>3oon_A Outer membrane protein (TPN50); protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; 1.79A {Borrelia burgdorferi}
Probab=25.05 E-value=1.1e+02 Score=22.14 Aligned_cols=53 Identities=15% Similarity=0.014 Sum_probs=35.7
Q ss_pred CEEEeeccCCCCCCCCCCccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCC
Q 023187 43 QALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (286)
Q Consensus 43 ~~l~~~~H~DtV~~~g~~D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (286)
-.|.+.||.|..+.. .+....+..=+..+.++|.+.|+ .....|......+.+
T Consensus 49 ~~i~I~GhtD~~g~~-~~N~~LS~~RA~aV~~~L~~~Gv--~~~~ri~~~g~G~~~ 101 (123)
T 3oon_A 49 NNILIEGHTEQFGLE-EEMHELSEKRARAIGNYLIKMKV--KDKDQILFKGWGSQK 101 (123)
T ss_dssp CCEEEEECCCSCCCH-HHHHHHHHHHHHHHHHHHHHTTS--SCGGGEEEEECTTCC
T ss_pred ceEEEEEEeCCCCCh-HHHHHHHHHHHHHHHHHHHHcCC--CchHeEEEEEEcCcC
Confidence 368999999986421 23345666666788889999987 436677766555444
No 85
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=22.71 E-value=3.9e+02 Score=24.63 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=26.4
Q ss_pred ccHHHHHHHHHHHHHHHHcCCCCCCCcCEEEEEecCCCC
Q 023187 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (286)
Q Consensus 61 D~k~gv~a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (286)
|| +|-++.+.+++.+.+.+ ++.+|..+.-..|-.
T Consensus 273 DM-gGAAaVlg~~~aia~l~----lpvnv~~ii~~~ENm 306 (482)
T 3ij3_A 273 DM-GGAAHALGLARMIMLQQ----LPVRLRLLIPAVENA 306 (482)
T ss_dssp GG-HHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEEC
T ss_pred cc-hHHHHHHHHHHHHHHcC----CCceEEEEEEeeccC
Confidence 44 56677889999999885 567888888887764
No 86
>1x9z_A DNA mismatch repair protein MUTL; alpha-beta fold, dimer, replication, signaling protein; HET: DNA MSE; 2.10A {Escherichia coli} SCOP: d.292.1.1
Probab=22.64 E-value=1.4e+02 Score=23.53 Aligned_cols=26 Identities=15% Similarity=0.114 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRTWVD 26 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v~~~ 26 (286)
+|..|.....-..+.|+++||+++..
T Consensus 65 ls~~e~~~l~~~~~~l~~~Gf~~e~~ 90 (188)
T 1x9z_A 65 VSAEEKSALEKAQSALAELGIDFQSD 90 (188)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred eCHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 57889999999999999999998864
No 87
>3lpe_A Putative transcription antitermination protein NU; transcription regulation, SPT4, SPT5, NUSG, archaea, evoluti directed RNA polymerase; 1.90A {Methanocaldococcus jannaschii} PDB: 3ewg_A
Probab=22.58 E-value=67 Score=22.33 Aligned_cols=23 Identities=17% Similarity=0.162 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEE
Q 023187 1 MSPASVRAGNLIRQWMEDAGLRT 23 (286)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~v 23 (286)
.|+.|.++++.|.++.+..|+++
T Consensus 18 ~sG~E~~V~~~L~~~~~~~~l~i 40 (92)
T 3lpe_A 18 MVGQEKNIAGLMASRAEKEQLDV 40 (92)
T ss_dssp CTTCHHHHHHHHHHHHHHTTCCE
T ss_pred ECChHHHHHHHHHHHHHhcCCcE
Confidence 47899999999999999989874
No 88
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=20.07 E-value=2.1e+02 Score=26.63 Aligned_cols=52 Identities=23% Similarity=0.266 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-E-Ec-------------ccc-cEEEEEcCCC--CCCCEEEeeccCCC
Q 023187 2 SPASVRAGNLIRQWMEDAGLRT-W-VD-------------HLG-NVHGRVEGLN--ASAQALLIGSHLDT 53 (286)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~v-~-~~-------------~~~-nv~a~~~g~~--~~~~~l~~~~H~Dt 53 (286)
|+.++.+.++++++|++.||.- . .+ +.+ .++|..-|+. ....--++.+|.|+
T Consensus 49 spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDS 118 (496)
T 3vat_A 49 SPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDS 118 (496)
T ss_dssp CSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccC
Confidence 5678999999999999999953 1 11 111 2555432321 12234678899998
Done!