BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023188
(286 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LLC1|BCCP2_ARATH Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2,
chloroplastic OS=Arabidopsis thaliana GN=BCCP2 PE=1 SV=1
Length = 255
Score = 214 bits (546), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 179/294 (60%), Gaps = 47/294 (15%)
Query: 1 MASIWIPCPKISWV-APVGSTGG---QQPQQQKQMLSFQNSSNSNPSLSFASSAPFSGFQ 56
MAS+ +PC KI + VGS G Q+ Q Q +SF + + N
Sbjct: 1 MASLSVPCVKICALNRRVGSLPGISTQRWQPQPNGISFPSDVSQN--------------- 45
Query: 57 CSIKKQSAVWKVQAKVNDVIAKKPLNSTAAVDTGSEVASSEEKVESAEKKIPDASAISAF 116
SA W+++A N+V++ NST + G A+ +P+ + +S F
Sbjct: 46 -----HSAFWRLRATTNEVVS----NSTPMTNGGYMNGK-------AKTNVPEPAELSEF 89
Query: 117 MTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQ---PPECIVN-MPPTMPHMMYPT 172
M +VS L+KLVDS+DI+EL++KQ DCE+++RKKEALQ PP + + MPP M +
Sbjct: 90 MAKVSGLLKLVDSKDIVELELKQLDCEIVIRKKEALQQAVPPAPVYHSMPPVMADF---S 146
Query: 173 PPPAAPAAAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFV 232
PPA P A P ++PA++ P A SSHPPLK PMAGTFYR P PGEP FV
Sbjct: 147 MPPAQPVALPPSPTPTSTPATAKPTSA-----PSSSHPPLKSPMAGTFYRSPGPGEPPFV 201
Query: 233 KVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVIVP 286
KVGDKVQKGQ+VCIIEAMKLMNEIEA++SGTI E+LAEDGK VSVDTPL VI P
Sbjct: 202 KVGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDGKPVSVDTPLFVIAP 255
>sp|Q42783|BCCP_SOYBN Biotin carboxyl carrier protein of acetyl-CoA carboxylase,
chloroplastic OS=Glycine max GN=ACCB-1 PE=1 SV=1
Length = 262
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/184 (59%), Positives = 125/184 (67%), Gaps = 21/184 (11%)
Query: 112 AISAFMTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPECIVNMPPTMPHMMYP 171
++S F+TQV+ LVKLVDSRDI+EL++KQ D E+ +RKKEA+ P
Sbjct: 91 SVSQFITQVASLVKLVDSRDIVELKLKQHDVEVTIRKKEAMPQPPPAPQPSVVYSPPPPA 150
Query: 172 TPPPAAPA---------AAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYR 222
PPP PA A PTP APA ++ KSS PPLK PMAGTFYR
Sbjct: 151 LPPPPVPASTPAPTLARATPTPTSAPAVKSA------------KSSLPPLKSPMAGTFYR 198
Query: 223 CPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLL 282
PAPGEP+FVKVGDKV+KGQVVCIIEAMKLMNEIEADQSGTI EI+AED KSVSVDTPL
Sbjct: 199 SPAPGEPSFVKVGDKVKKGQVVCIIEAMKLMNEIEADQSGTIVEIVAEDAKSVSVDTPLF 258
Query: 283 VIVP 286
VI P
Sbjct: 259 VIQP 262
>sp|Q42533|BCCP1_ARATH Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1,
chloroplastic OS=Arabidopsis thaliana GN=BCCP1 PE=1 SV=2
Length = 280
Score = 181 bits (460), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 126/178 (70%), Gaps = 7/178 (3%)
Query: 112 AISAFMTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPECIVNMPPTMPHMMYP 171
+IS F+TQV+ LVKLVDSRDI+ELQ+KQ DCEL++RKKEAL P+ P + M P
Sbjct: 107 SISEFLTQVTTLVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQA----PASYVMMQQP 162
Query: 172 TPPPAA---PAAAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYRCPAPGE 228
P A A A APA + P PP KSS P +K PMAGTFYR PAPGE
Sbjct: 163 NQPSYAQQMAPPAAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSPMAGTFYRSPAPGE 222
Query: 229 PAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVIVP 286
P F+KVGDKVQKGQV+CI+EAMKLMNEIE+D +GT+ +I+AEDGK VS+DTPL V+ P
Sbjct: 223 PPFIKVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSLDTPLFVVQP 280
>sp|Q06881|BCCP_NOSS1 Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc
sp. (strain PCC 7120 / UTEX 2576) GN=accB PE=1 SV=2
Length = 182
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 99/177 (55%), Gaps = 7/177 (3%)
Query: 117 MTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPEC-IVNMPPT-MPHMMYPTPP 174
++ L+ + DI E+ +K D EL VRK + +V P + + P+
Sbjct: 5 FNEIRQLLTTIAQTDIAEVTLKSDDFELTVRKAVGVNNSVVPVVTAPLSGVVGSGLPSAI 64
Query: 175 PAAPAAAPTPAPAPASPASS---VPVPALPPPAK--KSSHPPLKCPMAGTFYRCPAPGEP 229
P AAP+P+P P + ++ V P AK + PM GTFYR PAPGE
Sbjct: 65 PIVAHAAPSPSPEPGTSRAADHAVTSSGSQPGAKIIDQKLAEVASPMVGTFYRAPAPGEA 124
Query: 230 AFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVIVP 286
FV+VGD++++GQ VCIIEAMKLMNEIEAD SG + EIL ++G+ V + PL+ I P
Sbjct: 125 VFVEVGDRIRQGQTVCIIEAMKLMNEIEADVSGQVIEILVQNGEPVEYNQPLMRIKP 181
>sp|P0ABE1|BCCP_SHIFL Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Shigella flexneri GN=accB PE=3 SV=1
Length = 156
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 117 MTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPECIVNMPPTMPHMMYPTPPPA 176
+ ++ L++LV+ I EL++ S+ E VR A P P M Y P
Sbjct: 3 IRKIKKLIELVEESGISELEI--SEGEESVRISRA-APAASF----PVM-QQAYAAPMMQ 54
Query: 177 APAAAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVGD 236
PA + APA +VP P A+ S H ++ PM GTFYR P+P AF++VG
Sbjct: 55 QPAQSNAAAPA------TVPSMEAPAAAEISGHI-VRSPMVGTFYRTPSPDAKAFIEVGQ 107
Query: 237 KVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVI 284
KV G +CI+EAMK+MN+IEAD+SGT+ IL E G+ V D PL+VI
Sbjct: 108 KVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVI 155
>sp|P0ABD8|BCCP_ECOLI Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Escherichia coli (strain K12) GN=accB PE=1 SV=1
Length = 156
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 117 MTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPECIVNMPPTMPHMMYPTPPPA 176
+ ++ L++LV+ I EL++ S+ E VR A P P M Y P
Sbjct: 3 IRKIKKLIELVEESGISELEI--SEGEESVRISRA-APAASF----PVM-QQAYAAPMMQ 54
Query: 177 APAAAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVGD 236
PA + APA +VP P A+ S H ++ PM GTFYR P+P AF++VG
Sbjct: 55 QPAQSNAAAPA------TVPSMEAPAAAEISGHI-VRSPMVGTFYRTPSPDAKAFIEVGQ 107
Query: 237 KVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVI 284
KV G +CI+EAMK+MN+IEAD+SGT+ IL E G+ V D PL+VI
Sbjct: 108 KVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVI 155
>sp|P0ABD9|BCCP_ECOL6 Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=accB PE=3 SV=1
Length = 156
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 117 MTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPECIVNMPPTMPHMMYPTPPPA 176
+ ++ L++LV+ I EL++ S+ E VR A P P M Y P
Sbjct: 3 IRKIKKLIELVEESGISELEI--SEGEESVRISRA-APAASF----PVM-QQAYAAPMMQ 54
Query: 177 APAAAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVGD 236
PA + APA +VP P A+ S H ++ PM GTFYR P+P AF++VG
Sbjct: 55 QPAQSNAAAPA------TVPSMEAPAAAEISGHI-VRSPMVGTFYRTPSPDAKAFIEVGQ 107
Query: 237 KVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVI 284
KV G +CI+EAMK+MN+IEAD+SGT+ IL E G+ V D PL+VI
Sbjct: 108 KVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVI 155
>sp|P0ABE0|BCCP_ECO57 Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Escherichia coli O157:H7 GN=accB PE=3 SV=1
Length = 156
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 117 MTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPECIVNMPPTMPHMMYPTPPPA 176
+ ++ L++LV+ I EL++ S+ E VR A P P M Y P
Sbjct: 3 IRKIKKLIELVEESGISELEI--SEGEESVRISRA-APAASF----PVM-QQAYAAPMMQ 54
Query: 177 APAAAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVGD 236
PA + APA +VP P A+ S H ++ PM GTFYR P+P AF++VG
Sbjct: 55 QPAQSNAAAPA------TVPSMEAPAAAEISGHI-VRSPMVGTFYRTPSPDAKAFIEVGQ 107
Query: 237 KVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVI 284
KV G +CI+EAMK+MN+IEAD+SGT+ IL E G+ V D PL+VI
Sbjct: 108 KVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVI 155
>sp|Q1XDK5|BCCP_PORYE Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Porphyra yezoensis GN=accB PE=3 SV=1
Length = 158
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 117 MTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPECIVNMPPTMPHMMYPTPPPA 176
+ ++ DL+ V + I L++KQ EL++ K E I P+
Sbjct: 5 IKKLQDLLSSVQRKKIQTLKLKQGKFELLLNKTYKKVNQEII----------------PS 48
Query: 177 APAAAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVGD 236
+A +P+ + + ++ + + PM GTFY PAPGE FV+VGD
Sbjct: 49 QKSAVLQNSPSTIIKSINNTKKIFCVNEDRTEYATIVSPMVGTFYHSPAPGEKIFVQVGD 108
Query: 237 KVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLL 282
+V+ Q VCIIEAMKLMNEIEA+ G I EIL +DG V L+
Sbjct: 109 EVKFNQTVCIIEAMKLMNEIEAEIEGKIIEILVKDGDIVDCGQALM 154
>sp|P37799|BCCP_PSEAE Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=accB PE=3 SV=1
Length = 156
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%)
Query: 212 LKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAED 271
++ PM GTFYR +P FV+VG V+KG ++CI+EAMK+MN IEA+ SGTI IL E+
Sbjct: 83 VRSPMVGTFYRAASPTSANFVEVGQSVKKGDILCIVEAMKMMNHIEAEVSGTIESILVEN 142
Query: 272 GKSVSVDTPLLVIV 285
G+ V D PL IV
Sbjct: 143 GQPVEFDQPLFTIV 156
>sp|P43874|BCCP_HAEIN Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=accB PE=1 SV=1
Length = 155
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 207 SSHPPLKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAE 266
S H ++ PM GTFYR P+P AFV+VG V+ G +CI+EAMK+MN IEAD++G +
Sbjct: 78 SGHL-VRSPMVGTFYRSPSPEAKAFVEVGQSVKVGDALCIVEAMKMMNRIEADKAGVVKA 136
Query: 267 ILAEDGKSVSVDTPLLVI 284
IL DG +V D PL+VI
Sbjct: 137 ILINDGNAVEFDEPLIVI 154
>sp|Q5XAE6|BCCP_STRP6 Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Streptococcus pyogenes serotype M6 (strain ATCC
BAA-946 / MGAS10394) GN=accB PE=1 SV=1
Length = 166
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 117 MTQVSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPECIVNMPPTMPHMMYPTPPPA 176
+ ++ DL+ D+ + E K ++ ELI K E ++ ++ + + P P
Sbjct: 3 IQEIKDLMAQFDTSSLREFLFKTNEGELIFSKNEQ--------HLNASISNQEHAVPVPQ 54
Query: 177 APAAAPTPAPAPASPASSVPVPALPPPAKKS---SHPPLKCPMAGTFYRCPAPGEPAFVK 233
+ A +SPAS VP P +S ++ P+ G Y +P +P FV
Sbjct: 55 VQLVPNSTASEASSPASVKDVPVEEQPQAESFVAEGDIVESPLVGVAYLAASPDKPPFVA 114
Query: 234 VGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVI 284
VGD V+KGQ + IIEAMK+MNE+ A G I EIL + + L+ I
Sbjct: 115 VGDTVKKGQTLVIIEAMKVMNEVPAPCDGVITEILVSNEDVIEFGQGLVRI 165
>sp|O84125|BCCP_CHLTR Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=accB PE=3
SV=1
Length = 164
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 135 LQMKQSDCELIVRKKEALQPPECIVNMPPTMPHMMYPTPPPAAPAAAPTPAPAPASPASS 194
+ M ++ + IV K+E L+ E + P++ ++ A + P P + +
Sbjct: 11 IAMGRNKMKRIVIKREGLEL-ELERDTVPSIQEPVFYDNRLFAGFSQERPIPTDQNLGNP 69
Query: 195 VPVPALPPPAKKSSHPP-----LKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEA 249
+ ++ KK S P + P+ GTFY P+P PAF+K GD V + VVCI+EA
Sbjct: 70 IVKESI---EKKESEAPAQGDFIVSPLVGTFYGSPSPEAPAFIKPGDTVSEDTVVCIVEA 126
Query: 250 MKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVIV 285
MK+MNE++A SG + EIL +G V + L IV
Sbjct: 127 MKVMNEVKAGMSGRVEEILITNGDPVQFGSKLFRIV 162
>sp|P49786|BCCP_BACSU Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Bacillus subtilis (strain 168) GN=accB PE=3 SV=2
Length = 159
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%)
Query: 215 PMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKS 274
PM GTFY +P +V G KV + VVCI+EAMKL NEIEA+ G I E+L E+G+
Sbjct: 87 PMVGTFYASSSPEAGPYVTAGSKVNENTVVCIVEAMKLFNEIEAEVKGEIVEVLVENGQL 146
Query: 275 VSVDTPLLVI 284
V PL ++
Sbjct: 147 VEYGQPLFLV 156
>sp|Q9Z901|BCCP_CHLPN Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Chlamydia pneumoniae GN=accB PE=3 SV=1
Length = 167
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%)
Query: 212 LKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAED 271
+ P+ GTFY PAP P+FVK GD V + +VCI+EAMK+MNE++A SG + E+L +
Sbjct: 90 ISSPLVGTFYGSPAPDSPSFVKPGDIVSEDTIVCIVEAMKVMNEVKAGMSGRVLEVLITN 149
Query: 272 GKSVSVDTPLLVI 284
G V + L I
Sbjct: 150 GDPVQFGSKLFRI 162
>sp|O19918|BCCP_CYACA Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Cyanidium caldarium GN=accB PE=3 SV=1
Length = 152
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 215 PMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKS 274
P++G FY PG FV VG V KGQ +CIIEAMK MNEIE+D G I +I A +G
Sbjct: 78 PISGIFYSSSKPGASPFVAVGSVVSKGQTLCIIEAMKTMNEIESDSIGKIHQICARNGDF 137
Query: 275 VSVDTPLLVIV 285
V+ + L+ I+
Sbjct: 138 VTKNQVLMKII 148
>sp|Q9PKR5|BCCP_CHLMU Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Chlamydia muridarum (strain MoPn / Nigg) GN=accB PE=3
SV=1
Length = 163
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 215 PMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKS 274
P+ GTFY P+P PAFVK GD V + VVCI+EAMK+MNE++A +G + E+L +G
Sbjct: 91 PLVGTFYGAPSPESPAFVKPGDIVSEDTVVCIVEAMKVMNEVKAGMAGRVEEVLITNGDP 150
Query: 275 VSVDTPLLVIV 285
V + L IV
Sbjct: 151 VQFGSKLFRIV 161
>sp|P51283|BCCP_PORPU Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Porphyra purpurea GN=accB PE=3 SV=1
Length = 157
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 80/167 (47%), Gaps = 25/167 (14%)
Query: 120 VSDLVKLVDSRDIMELQMKQSDCELIVRKKEALQPPECIV----NMPPTMPHMMYPTPPP 175
+ DL+ V + I L++K++ ELI+ K P E + ++ ++ PP
Sbjct: 8 LQDLLSSVQRKKIQTLKLKKNKFELILNKPSKKVPQEVVSLKSSHIFKSIHSETINIPPK 67
Query: 176 AAPAAAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVG 235
+ P+ A+ S PM GTFY PAPGE FV+VG
Sbjct: 68 KTESINSKPSTNYATIVS---------------------PMVGTFYHSPAPGEKIFVQVG 106
Query: 236 DKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLL 282
D V+ Q VCIIEAMKLMNEIEA+ G I EIL ++G V L+
Sbjct: 107 DIVKCNQTVCIIEAMKLMNEIEAEIEGIIIEILVKNGDIVDCGQALM 153
>sp|D3DJ41|2OCL_HYDTT 2-oxoglutarate carboxylase large subunit OS=Hydrogenobacter
thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
GN=cfiA PE=1 SV=1
Length = 652
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 176 AAPAAAPTPAPAPASPASSVPVPALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVG 235
A P PTP A A +P P ++ PM G R VK G
Sbjct: 550 AIPKGGPTPT---AVQAEEKGIPKATQPGDATA------PMPGRVVRV-------LVKEG 593
Query: 236 DKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVI 284
DKV++GQ V I+EAMK+ NEI A SG + ++ + G +V+ D LL I
Sbjct: 594 DKVKEGQTVAIVEAMKMENEIHAPISGVVEKVFVKPGDNVTPDDALLRI 642
>sp|Q58628|PYCB_METJA Pyruvate carboxylase subunit B OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pycB PE=1 SV=1
Length = 567
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 232 VKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTPLLVI 284
VK GDKV+KG V+ ++EAMK+ + IE+ GT+ IL ++G +V+V +++I
Sbjct: 514 VKEGDKVKKGDVIVVLEAMKMEHPIESPVEGTVERILIDEGDAVNVGDVIMII 566
>sp|Q9ZAA7|GCDC_ACIFV Glutaconyl-CoA decarboxylase subunit gamma OS=Acidaminococcus
fermentans (strain ATCC 25085 / DSM 20731 / VR4) GN=gcdC
PE=1 SV=1
Length = 145
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 223 CPAPGEPAFVKV--GDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDTP 280
P PG+ V V GDKV+ G V+ I+EAMK+ NEI A + GT++E+ G +V+
Sbjct: 82 APMPGKILSVNVKPGDKVEAGDVLLILEAMKMQNEIMAPEDGTVSEVRVNAGDTVATGDV 141
Query: 281 LLVI 284
++++
Sbjct: 142 MVIL 145
>sp|P13187|DCOA_KLEPN Oxaloacetate decarboxylase alpha chain OS=Klebsiella pneumoniae
GN=oadA PE=3 SV=2
Length = 596
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 211 PLKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAE 270
P+ P+AGT ++ A G V G+V+ I+EAMK+ EI A Q+GT+ I +
Sbjct: 529 PVTAPLAGTIWKVLASE-------GQTVAAGEVLLILEAMKMETEIRAAQAGTVRGIAVK 581
Query: 271 DGKSVSVDTPLLVI 284
G +V+V L+ +
Sbjct: 582 AGDAVAVGDTLMTL 595
>sp|Q8XGX8|DCOA_SALTI Oxaloacetate decarboxylase alpha chain OS=Salmonella typhi GN=oadA1
PE=3 SV=3
Length = 591
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 211 PLKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAE 270
P+ P+AG ++ A G V +G V+ I+EAMK+ EI A Q+GT+ I +
Sbjct: 524 PVTAPLAGNIWKVIATE-------GQSVAEGDVLLILEAMKMETEIRAAQAGTVRGIAVK 576
Query: 271 DGKSVSVDTPLLVI 284
G +VSV L+ +
Sbjct: 577 SGDAVSVGDTLMTL 590
>sp|Q03030|DCOA_SALTY Oxaloacetate decarboxylase alpha chain OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=oadA1 PE=3 SV=2
Length = 591
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 211 PLKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAE 270
P+ P+AG ++ A G V +G V+ I+EAMK+ EI A Q+GT+ I +
Sbjct: 524 PVTAPLAGNIWKVIATE-------GQTVAEGDVLLILEAMKMETEIRAAQAGTVRGIAVK 576
Query: 271 DGKSVSVDTPLLVI 284
G +VSV L+ +
Sbjct: 577 SGDAVSVGDTLMTL 590
>sp|P29337|BCCP_STRMU Biotin carboxyl carrier protein OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=bcc PE=3 SV=2
Length = 130
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 214 CPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGK 273
PM GT + V VGD V + Q + I+EAMK+ NEI A +GT++ I G+
Sbjct: 66 APMPGTILKV-------LVNVGDTVSENQPLMILEAMKMENEIVAGMAGTVSAIHVSSGQ 118
Query: 274 SVSVDTPLLVI 284
+V+ L+ I
Sbjct: 119 TVNAGDNLITI 129
>sp|P05165|PCCA_HUMAN Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Homo
sapiens GN=PCCA PE=1 SV=4
Length = 728
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 222 RCPAPGEPAFVKV--GDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGKSVSVDT 279
R P PG V V GD V +GQ +C+IEAMK+ N + A ++GT+ + + G +V +
Sbjct: 663 RSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVG-EG 721
Query: 280 PLLV 283
LLV
Sbjct: 722 DLLV 725
>sp|Q96RQ3|MCCA_HUMAN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Homo sapiens GN=MCCC1 PE=1 SV=3
Length = 725
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 195 VPVPAL--PPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKL 252
+PVP ++++ PL PM GT E FVK GDKV+ G + ++ AMK+
Sbjct: 631 IPVPKYLSSVSSQETQGGPL-APMTGTI-------EKVFVKAGDKVKAGDSLMVMIAMKM 682
Query: 253 MNEIEADQSGTIAEILAEDGKSVSVDTPLL 282
+ I++ + GT+ ++ +G + TPL+
Sbjct: 683 EHTIKSPKDGTVKKVFYREGAQANRHTPLV 712
>sp|Q5I0C3|MCCA_RAT Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Mccc1 PE=1 SV=1
Length = 715
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 194 SVPVP-ALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKL 252
+PVP L P + + + PM GT E FVK GD+V+ G + ++ AMK+
Sbjct: 626 GIPVPKYLSPVSAEGTQGGTIAPMTGTI-------EKVFVKAGDRVKAGDALMVMIAMKM 678
Query: 253 MNEIEADQSGTIAEILAEDGKSVSVDTPLL 282
+ I+A + G I ++ +G + PL+
Sbjct: 679 EHTIKAPKDGRIKKVFFSEGAQANRHAPLV 708
>sp|P38095|LAMA_EMENI Putative urea carboxylase OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=lamA PE=2
SV=2
Length = 1241
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 232 VKVGDKVQKGQVVCIIEAMKLMNEIEADQ--SGTIAE-ILAEDGKSVSVDTPLLVI 284
VK GDK+ K QVV I+EAMKL + A+ +G + E ILA+ GKS+ PL+++
Sbjct: 1183 VKEGDKLDKDQVVVILEAMKLEIAVRAESAAAGAVVEKILAQPGKSIEAGKPLMLV 1238
>sp|Q99MR8|MCCA_MOUSE Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus
musculus GN=Mccc1 PE=2 SV=2
Length = 717
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 194 SVPVP-ALPPPAKKSSHPPLKCPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKL 252
+PVP L P + + + PM GT E FVK GD+V+ G + ++ AMK+
Sbjct: 626 GIPVPKYLSPVSAEGAQGGTIAPMTGTI-------EKVFVKAGDRVKAGDSLMVMIAMKM 678
Query: 253 MNEIEADQSGTIAEILAEDGKSVSVDTPLL 282
+ I+A + G I ++ +G + PL+
Sbjct: 679 EHTIKAPKDGRIKKVFFSEGAQANRHAPLV 708
>sp|C0H419|BLAP_BACSU Biotin/lipoyl attachment protein OS=Bacillus subtilis (strain 168)
GN=yngHB PE=1 SV=1
Length = 73
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 214 CPMAGTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDGK 273
MAG ++ VK GD+++KGQ V I+E+MK+ I AD+SG + E+ ++G
Sbjct: 5 IQMAGNLWKVH-------VKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGD 57
Query: 274 SVSVDTPLL 282
V+ LL
Sbjct: 58 FVNEGDVLL 66
>sp|P08461|ODP2_RAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Rattus
norvegicus GN=Dlat PE=1 SV=3
Length = 632
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 218 GTFYRCPAPGEPAFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIAEILAEDG-KSVS 276
GT R KVG+K+ +G ++ IE K E + G +A+IL +G + V
Sbjct: 223 GTVQRWEK-------KVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVP 275
Query: 277 VDTPLLVIV 285
+ TPL +IV
Sbjct: 276 LGTPLCIIV 284
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,218,272
Number of Sequences: 539616
Number of extensions: 5035490
Number of successful extensions: 90782
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 1488
Number of HSP's that attempted gapping in prelim test: 44837
Number of HSP's gapped (non-prelim): 23993
length of query: 286
length of database: 191,569,459
effective HSP length: 116
effective length of query: 170
effective length of database: 128,974,003
effective search space: 21925580510
effective search space used: 21925580510
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)