Query 023191
Match_columns 286
No_of_seqs 238 out of 2662
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 09:07:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023191.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023191hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0112 GlyA Glycine/serine hy 100.0 3.7E-45 8E-50 316.5 22.7 242 25-275 5-247 (413)
2 PF00464 SHMT: Serine hydroxym 100.0 6.7E-45 1.5E-49 325.0 18.1 257 28-284 2-258 (399)
3 KOG2467 Glycine/serine hydroxy 100.0 6.5E-44 1.4E-48 304.3 19.9 268 17-284 11-279 (477)
4 PLN02271 serine hydroxymethylt 100.0 4.8E-43 1E-47 320.5 26.3 256 20-275 122-378 (586)
5 PLN03226 serine hydroxymethylt 100.0 1.4E-38 2.9E-43 294.5 25.5 262 14-275 2-263 (475)
6 PRK13580 serine hydroxymethylt 100.0 1.6E-38 3.5E-43 289.8 24.1 247 25-281 28-309 (493)
7 PTZ00094 serine hydroxymethylt 100.0 5E-36 1.1E-40 277.7 25.9 252 24-276 12-263 (452)
8 PRK00011 glyA serine hydroxyme 100.0 1.4E-31 2.9E-36 246.2 25.6 246 25-279 4-250 (416)
9 cd00378 SHMT Serine-glycine hy 100.0 1.8E-31 4E-36 244.2 26.2 243 29-278 2-245 (402)
10 PRK13034 serine hydroxymethylt 100.0 2.2E-31 4.8E-36 244.0 26.0 244 22-274 4-247 (416)
11 COG0520 csdA Selenocysteine ly 100.0 2.3E-29 4.9E-34 228.4 17.7 214 49-278 24-245 (405)
12 COG0436 Aspartate/tyrosine/aro 100.0 1.3E-27 2.7E-32 217.0 18.9 215 47-279 29-260 (393)
13 KOG0257 Kynurenine aminotransf 99.9 6.7E-27 1.5E-31 204.4 16.9 238 24-280 9-269 (420)
14 COG1104 NifS Cysteine sulfinat 99.9 1.4E-25 3.1E-30 197.6 14.2 199 57-275 12-220 (386)
15 PLN02651 cysteine desulfurase 99.9 5.1E-25 1.1E-29 199.1 16.4 205 53-276 6-218 (364)
16 KOG1549 Cysteine desulfurase N 99.9 7.3E-25 1.6E-29 193.9 15.0 205 47-272 43-257 (428)
17 PF00266 Aminotran_5: Aminotra 99.9 1.8E-24 4E-29 196.0 16.2 211 52-279 5-222 (371)
18 PRK10874 cysteine sulfinate de 99.9 2.4E-24 5.2E-29 197.2 17.0 213 48-278 20-242 (401)
19 TIGR01977 am_tr_V_EF2568 cyste 99.9 3.5E-24 7.5E-29 194.3 17.9 202 57-274 11-216 (376)
20 PRK09295 bifunctional cysteine 99.9 2.7E-24 5.8E-29 197.2 16.3 212 48-277 24-245 (406)
21 cd06451 AGAT_like Alanine-glyo 99.9 7.5E-24 1.6E-28 190.8 18.9 204 49-279 1-208 (356)
22 TIGR03392 FeS_syn_CsdA cystein 99.9 4.7E-24 1E-28 195.0 17.0 213 48-278 17-239 (398)
23 PLN02409 serine--glyoxylate am 99.9 1.7E-23 3.7E-28 191.4 19.2 204 49-279 11-223 (401)
24 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.3E-23 2.8E-28 191.5 18.1 211 47-279 19-242 (387)
25 TIGR03235 DNA_S_dndA cysteine 99.9 8.6E-24 1.9E-28 190.3 16.3 202 54-274 6-216 (353)
26 PLN02855 Bifunctional selenocy 99.9 2.3E-23 4.9E-28 192.1 17.9 212 48-277 33-254 (424)
27 TIGR03402 FeS_nifS cysteine de 99.9 2.1E-23 4.5E-28 189.6 16.3 202 53-274 6-214 (379)
28 TIGR01976 am_tr_V_VC1184 cyste 99.9 2.5E-23 5.4E-28 190.2 16.7 213 49-279 19-238 (397)
29 TIGR01979 sufS cysteine desulf 99.9 4.3E-23 9.3E-28 189.0 17.7 213 48-277 19-240 (403)
30 TIGR02006 IscS cysteine desulf 99.9 2.8E-23 6E-28 190.2 16.1 207 49-274 5-220 (402)
31 cd06453 SufS_like Cysteine des 99.9 4.4E-23 9.5E-28 187.0 17.1 211 53-279 6-222 (373)
32 PRK14012 cysteine desulfurase; 99.9 8.7E-23 1.9E-27 187.1 16.6 202 54-274 11-222 (404)
33 PLN00175 aminotransferase fami 99.9 2E-22 4.4E-27 185.0 18.7 235 24-279 33-282 (413)
34 PRK06108 aspartate aminotransf 99.9 1.8E-22 4E-27 183.5 18.2 231 29-279 7-255 (382)
35 PRK08960 hypothetical protein; 99.9 4.8E-22 1E-26 181.2 20.3 234 26-279 8-257 (387)
36 PRK02948 cysteine desulfurase; 99.9 1.3E-22 2.8E-27 184.5 16.5 202 53-274 7-216 (381)
37 PRK13355 bifunctional HTH-doma 99.9 3.6E-22 7.9E-27 188.2 18.7 226 23-271 119-368 (517)
38 TIGR03403 nifS_epsilon cystein 99.9 3E-22 6.5E-27 182.2 17.0 201 54-274 7-218 (382)
39 TIGR03540 DapC_direct LL-diami 99.9 1.7E-21 3.6E-26 177.4 20.9 216 46-279 29-260 (383)
40 PRK06348 aspartate aminotransf 99.9 1.3E-21 2.8E-26 178.2 19.9 240 21-279 4-257 (384)
41 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 5.6E-22 1.2E-26 179.1 17.4 206 54-280 9-224 (361)
42 PRK07366 succinyldiaminopimela 99.9 8.9E-22 1.9E-26 179.5 18.6 216 46-280 30-263 (388)
43 PRK02769 histidine decarboxyla 99.9 2.2E-21 4.7E-26 175.4 20.9 202 59-276 35-250 (380)
44 PRK12414 putative aminotransfe 99.9 9.4E-22 2E-26 179.1 18.6 233 27-279 11-258 (384)
45 PRK05957 aspartate aminotransf 99.9 1.3E-21 2.9E-26 178.4 19.4 236 25-280 6-257 (389)
46 PRK08912 hypothetical protein; 99.9 1.3E-21 2.8E-26 178.3 19.3 238 21-279 2-255 (387)
47 PRK13238 tnaA tryptophanase/L- 99.9 3.4E-22 7.3E-27 184.9 15.1 228 26-279 12-282 (460)
48 PRK07681 aspartate aminotransf 99.9 1.6E-21 3.5E-26 178.4 19.5 233 26-279 8-262 (399)
49 TIGR01437 selA_rel uncharacter 99.9 8.9E-22 1.9E-26 177.7 17.4 190 54-278 21-229 (363)
50 PLN02368 alanine transaminase 99.9 3E-21 6.4E-26 176.4 20.8 186 83-279 102-318 (407)
51 PRK08361 aspartate aminotransf 99.9 1.4E-21 3E-26 178.3 18.4 230 29-278 16-259 (391)
52 COG0399 WecE Predicted pyridox 99.9 9.1E-22 2E-26 174.8 16.6 191 53-273 8-199 (374)
53 PRK09276 LL-diaminopimelate am 99.9 3.4E-21 7.4E-26 175.4 20.8 236 26-279 7-262 (385)
54 TIGR02326 transamin_PhnW 2-ami 99.9 2.1E-21 4.6E-26 175.5 19.3 200 49-276 5-210 (363)
55 PRK07550 hypothetical protein; 99.9 3E-21 6.5E-26 175.9 20.3 211 47-277 30-257 (386)
56 PRK05942 aspartate aminotransf 99.9 3.7E-21 8.1E-26 175.7 20.7 235 27-280 12-267 (394)
57 PTZ00377 alanine aminotransfer 99.9 1.6E-21 3.5E-26 182.4 18.7 206 59-279 90-326 (481)
58 PRK09147 succinyldiaminopimela 99.9 2.2E-21 4.7E-26 177.4 19.0 232 27-279 5-268 (396)
59 PRK07337 aminotransferase; Val 99.9 2.5E-21 5.5E-26 176.5 18.9 232 27-279 7-255 (388)
60 PRK08068 transaminase; Reviewe 99.9 4.1E-21 8.8E-26 175.2 20.0 212 47-279 33-263 (389)
61 PRK06290 aspartate aminotransf 99.9 7.5E-21 1.6E-25 174.4 21.8 229 30-279 22-274 (410)
62 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.8E-21 3.9E-26 176.3 17.6 211 47-280 7-231 (370)
63 PLN03032 serine decarboxylase; 99.9 7.8E-21 1.7E-25 170.8 21.2 203 58-276 35-253 (374)
64 PRK06207 aspartate aminotransf 99.9 4.6E-21 1E-25 175.7 19.1 215 47-279 40-274 (405)
65 PRK13479 2-aminoethylphosphona 99.9 7.9E-21 1.7E-25 172.0 20.1 203 50-279 8-215 (368)
66 PRK07682 hypothetical protein; 99.9 4.5E-21 9.7E-26 174.3 18.3 216 46-279 20-249 (378)
67 PRK09082 methionine aminotrans 99.9 1.9E-21 4.1E-26 177.2 15.4 236 26-281 11-261 (386)
68 PRK07777 aminotransferase; Val 99.9 1.1E-20 2.4E-25 172.3 20.0 235 27-279 6-255 (387)
69 PRK07324 transaminase; Validat 99.9 1.8E-21 3.8E-26 176.6 14.5 208 47-280 27-246 (373)
70 TIGR03537 DapC succinyldiamino 99.9 7.6E-21 1.6E-25 171.1 18.2 209 49-279 3-229 (350)
71 PLN00145 tyrosine/nicotianamin 99.9 9.2E-21 2E-25 174.8 19.1 206 47-271 53-277 (430)
72 PRK07309 aromatic amino acid a 99.9 1.1E-20 2.4E-25 172.5 19.0 242 19-279 3-260 (391)
73 cd00613 GDC-P Glycine cleavage 99.9 1.2E-20 2.6E-25 172.4 19.1 209 49-278 23-246 (398)
74 PRK06225 aspartate aminotransf 99.9 1.5E-20 3.3E-25 170.9 19.2 228 28-279 7-248 (380)
75 TIGR03538 DapC_gpp succinyldia 99.9 2.2E-20 4.7E-25 170.6 20.3 228 30-279 7-267 (393)
76 KOG0259 Tyrosine aminotransfer 99.9 1.1E-20 2.3E-25 163.3 17.0 206 47-273 62-288 (447)
77 PLN02231 alanine transaminase 99.9 1.6E-20 3.4E-25 176.7 18.4 235 28-278 112-377 (534)
78 COG1168 MalY Bifunctional PLP- 99.9 1.3E-20 2.7E-25 163.7 16.2 207 47-273 26-249 (388)
79 TIGR01822 2am3keto_CoA 2-amino 99.9 1.2E-20 2.7E-25 172.2 16.7 210 46-280 38-262 (393)
80 cd00615 Orn_deC_like Ornithine 99.9 2.6E-21 5.6E-26 170.0 11.7 167 95-274 62-237 (294)
81 PLN02187 rooty/superroot1 99.9 2.9E-20 6.2E-25 172.8 18.9 208 46-272 66-292 (462)
82 TIGR01814 kynureninase kynuren 99.9 8.7E-21 1.9E-25 174.0 15.1 210 48-273 28-248 (406)
83 PLN00143 tyrosine/nicotianamin 99.9 4.1E-20 8.9E-25 169.6 18.9 207 46-271 32-257 (409)
84 TIGR01788 Glu-decarb-GAD gluta 99.9 4E-20 8.6E-25 169.5 18.6 198 56-273 51-277 (431)
85 PRK08363 alanine aminotransfer 99.9 4.6E-20 9.9E-25 168.8 18.9 209 47-275 31-258 (398)
86 PLN02656 tyrosine transaminase 99.9 3.2E-20 6.9E-25 170.3 17.9 207 46-271 31-256 (409)
87 PRK07683 aminotransferase A; V 99.9 7E-20 1.5E-24 167.0 19.8 233 26-279 8-256 (387)
88 PRK08636 aspartate aminotransf 99.9 1E-19 2.2E-24 166.8 20.9 217 46-279 33-271 (403)
89 COG0075 Serine-pyruvate aminot 99.9 7.1E-20 1.5E-24 162.7 19.1 206 49-282 7-218 (383)
90 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 5.2E-20 1.1E-24 165.5 18.6 200 51-278 3-208 (355)
91 PTZ00433 tyrosine aminotransfe 99.9 2.5E-20 5.4E-25 171.2 16.8 228 22-270 7-263 (412)
92 PRK05764 aspartate aminotransf 99.8 1.2E-19 2.5E-24 165.7 20.3 237 24-279 5-261 (393)
93 PRK06107 aspartate aminotransf 99.8 6.3E-20 1.4E-24 168.1 18.4 215 46-279 33-264 (402)
94 PRK04366 glycine dehydrogenase 99.8 6.4E-20 1.4E-24 171.2 17.9 200 57-278 81-297 (481)
95 PRK09148 aminotransferase; Val 99.8 2.3E-19 4.9E-24 164.5 21.2 214 47-279 31-261 (405)
96 PRK03317 histidinol-phosphate 99.8 2.3E-20 4.9E-25 169.0 14.5 213 48-280 28-252 (368)
97 PLN02376 1-aminocyclopropane-1 99.8 5.4E-20 1.2E-24 172.0 17.0 220 47-279 47-303 (496)
98 PRK06855 aminotransferase; Val 99.8 1.7E-19 3.7E-24 166.6 20.1 204 47-270 33-257 (433)
99 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1.3E-19 2.8E-24 164.7 18.2 190 55-275 9-200 (379)
100 TIGR03588 PseC UDP-4-keto-6-de 99.8 1.8E-19 4E-24 163.8 18.3 186 57-273 7-200 (380)
101 PLN02724 Molybdenum cofactor s 99.8 6.1E-20 1.3E-24 180.8 16.1 219 48-279 35-284 (805)
102 PRK06939 2-amino-3-ketobutyrat 99.8 1.1E-19 2.4E-24 165.9 16.5 208 47-279 43-265 (397)
103 PF01041 DegT_DnrJ_EryC1: DegT 99.8 5.6E-20 1.2E-24 166.1 13.9 184 59-273 4-190 (363)
104 PRK09265 aminotransferase AlaT 99.8 4E-19 8.7E-24 162.9 19.6 202 47-271 34-255 (404)
105 PRK13520 L-tyrosine decarboxyl 99.8 3.3E-19 7.2E-24 161.4 18.7 205 51-278 25-242 (371)
106 PRK14807 histidinol-phosphate 99.8 2.1E-19 4.4E-24 161.8 16.9 205 48-280 24-237 (351)
107 PLN02450 1-aminocyclopropane-1 99.8 4.2E-19 9.1E-24 165.3 18.0 218 47-278 39-295 (468)
108 TIGR01141 hisC histidinol-phos 99.8 1.1E-19 2.3E-24 163.2 13.2 204 47-280 20-234 (346)
109 cd06450 DOPA_deC_like DOPA dec 99.8 4.8E-20 1E-24 165.3 10.9 174 84-271 30-230 (345)
110 cd01494 AAT_I Aspartate aminot 99.8 5.1E-19 1.1E-23 141.9 15.6 163 96-271 4-170 (170)
111 cd06454 KBL_like KBL_like; thi 99.8 2.9E-19 6.2E-24 160.4 15.5 195 59-279 17-222 (349)
112 PRK09275 aspartate aminotransf 99.8 1.9E-19 4.1E-24 167.8 14.6 203 47-273 101-328 (527)
113 PLN02721 threonine aldolase 99.8 3.6E-19 7.7E-24 160.1 16.0 205 48-277 7-227 (353)
114 TIGR02379 ECA_wecE TDP-4-keto- 99.8 6.5E-19 1.4E-23 159.6 17.6 190 56-277 7-202 (376)
115 TIGR01265 tyr_nico_aTase tyros 99.8 1.7E-18 3.6E-23 158.7 20.4 208 46-272 31-257 (403)
116 cd06502 TA_like Low-specificit 99.8 3.1E-19 6.6E-24 159.6 14.6 196 58-279 10-217 (338)
117 TIGR01264 tyr_amTase_E tyrosin 99.8 1.7E-18 3.6E-23 158.6 19.6 205 47-272 32-256 (401)
118 PRK07568 aspartate aminotransf 99.8 2.1E-18 4.6E-23 157.6 20.1 208 47-276 31-256 (397)
119 PRK08175 aminotransferase; Val 99.8 1.8E-18 3.9E-23 158.1 19.5 215 46-280 29-261 (395)
120 TIGR00474 selA seryl-tRNA(sec) 99.8 6.6E-19 1.4E-23 162.1 16.4 205 54-279 89-309 (454)
121 PRK03158 histidinol-phosphate 99.8 3.3E-19 7.1E-24 160.9 14.1 203 47-280 30-246 (359)
122 PRK04311 selenocysteine syntha 99.8 7.9E-19 1.7E-23 162.0 16.7 206 53-279 93-314 (464)
123 PRK04870 histidinol-phosphate 99.8 5.3E-19 1.1E-23 159.4 14.7 206 47-280 27-241 (356)
124 PRK07590 L,L-diaminopimelate a 99.8 1.8E-18 3.9E-23 158.8 18.4 209 47-276 35-269 (409)
125 PLN03026 histidinol-phosphate 99.8 7.7E-19 1.7E-23 159.7 15.7 203 47-280 53-264 (380)
126 PRK05839 hypothetical protein; 99.8 3E-18 6.5E-23 155.5 19.2 209 47-279 25-255 (374)
127 PRK06836 aspartate aminotransf 99.8 3E-18 6.4E-23 156.6 19.0 209 47-275 34-263 (394)
128 TIGR00858 bioF 8-amino-7-oxono 99.8 1.7E-18 3.6E-23 155.9 17.0 207 47-279 17-237 (360)
129 PRK01533 histidinol-phosphate 99.8 5.5E-19 1.2E-23 159.8 13.8 202 47-280 30-246 (366)
130 cd00617 Tnase_like Tryptophana 99.8 1.1E-18 2.4E-23 159.8 15.7 208 46-279 11-257 (431)
131 PRK14809 histidinol-phosphate 99.8 9.9E-19 2.2E-23 157.7 15.3 204 47-279 31-245 (357)
132 TIGR03812 tyr_de_CO2_Arch tyro 99.8 3.2E-18 6.8E-23 155.1 18.5 198 58-278 32-247 (373)
133 PLN02414 glycine dehydrogenase 99.8 9E-19 2E-23 172.5 15.8 171 87-277 563-754 (993)
134 TIGR03576 pyridox_MJ0158 pyrid 99.8 9.5E-19 2.1E-23 156.8 14.4 186 59-280 35-226 (346)
135 PRK07865 N-succinyldiaminopime 99.8 1.9E-18 4.2E-23 156.2 16.3 223 23-279 3-246 (364)
136 PRK02610 histidinol-phosphate 99.8 1.7E-18 3.6E-23 157.2 15.8 211 47-280 29-258 (374)
137 COG0156 BioF 7-keto-8-aminopel 99.8 2.2E-18 4.7E-23 154.4 16.0 207 47-280 40-263 (388)
138 PLN02607 1-aminocyclopropane-1 99.8 3.5E-18 7.6E-23 158.1 18.0 219 47-279 48-303 (447)
139 PRK05387 histidinol-phosphate 99.8 9.5E-19 2.1E-23 157.5 13.8 199 47-279 25-233 (353)
140 PRK09257 aromatic amino acid a 99.8 5.4E-18 1.2E-22 155.0 18.8 225 28-270 6-260 (396)
141 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 3.3E-18 7.1E-23 155.3 17.2 187 57-275 8-199 (375)
142 TIGR03801 asp_4_decarbox aspar 99.8 1.8E-18 3.8E-23 161.2 15.2 205 47-273 95-327 (521)
143 PRK06234 methionine gamma-lyas 99.8 2E-18 4.3E-23 157.8 14.8 166 87-279 63-236 (400)
144 PRK09105 putative aminotransfe 99.8 1.8E-18 4E-23 156.6 14.4 200 46-279 43-256 (370)
145 TIGR01825 gly_Cac_T_rel pyrido 99.8 3.8E-18 8.2E-23 155.3 16.2 207 47-279 34-253 (385)
146 PRK07179 hypothetical protein; 99.8 3.9E-18 8.4E-23 156.5 16.2 194 59-279 70-271 (407)
147 PRK08861 cystathionine gamma-s 99.8 2.4E-18 5.2E-23 156.1 14.5 158 88-273 53-217 (388)
148 cd00616 AHBA_syn 3-amino-5-hyd 99.8 4.8E-18 1E-22 152.7 16.4 161 97-276 23-187 (352)
149 PRK15407 lipopolysaccharide bi 99.8 9.6E-18 2.1E-22 154.6 18.6 209 33-273 10-236 (438)
150 PRK07811 cystathionine gamma-s 99.8 2.7E-18 5.9E-23 156.3 14.7 159 88-273 61-225 (388)
151 PRK03321 putative aminotransfe 99.8 1.2E-18 2.5E-23 156.9 12.2 203 47-279 23-239 (352)
152 TIGR01329 cysta_beta_ly_E cyst 99.8 1.8E-18 4E-23 156.9 13.4 155 96-273 51-210 (378)
153 PRK08153 histidinol-phosphate 99.8 3.1E-18 6.6E-23 155.2 14.8 202 47-279 33-246 (369)
154 PRK07810 O-succinylhomoserine 99.8 3E-18 6.5E-23 156.5 14.7 162 88-275 70-236 (403)
155 COG0079 HisC Histidinol-phosph 99.8 4.5E-18 9.7E-23 152.3 15.5 204 47-282 23-238 (356)
156 PTZ00376 aspartate aminotransf 99.8 4.1E-18 8.9E-23 156.2 15.3 208 46-269 29-264 (404)
157 PLN02483 serine palmitoyltrans 99.8 4.5E-18 9.7E-23 159.0 15.8 171 84-280 142-332 (489)
158 PRK02731 histidinol-phosphate 99.8 5.2E-18 1.1E-22 153.5 15.5 204 46-280 32-249 (367)
159 PRK15481 transcriptional regul 99.8 5.8E-18 1.3E-22 156.5 16.1 204 48-279 87-304 (431)
160 PRK08574 cystathionine gamma-s 99.8 4.3E-18 9.3E-23 154.7 14.9 162 88-276 53-220 (385)
161 PRK00950 histidinol-phosphate 99.8 2.8E-18 6.1E-23 154.9 13.6 202 47-279 35-246 (361)
162 PRK07504 O-succinylhomoserine 99.8 3.2E-18 7E-23 156.2 13.9 160 89-275 66-231 (398)
163 TIGR01328 met_gam_lyase methio 99.8 3.8E-18 8.3E-23 155.4 14.4 165 88-279 59-229 (391)
164 PLN03227 serine palmitoyltrans 99.8 7.1E-18 1.5E-22 153.8 16.0 198 58-279 13-230 (392)
165 COG1103 Archaea-specific pyrid 99.8 1.2E-17 2.5E-22 138.8 15.5 208 46-277 15-238 (382)
166 PRK07503 methionine gamma-lyas 99.8 4.8E-18 1E-22 155.3 14.7 163 89-278 66-234 (403)
167 PRK05958 8-amino-7-oxononanoat 99.8 1.2E-17 2.6E-22 151.8 17.2 208 46-279 39-259 (385)
168 PLN02822 serine palmitoyltrans 99.8 3.1E-18 6.7E-23 159.8 13.4 206 47-279 110-336 (481)
169 PRK08064 cystathionine beta-ly 99.8 5.1E-18 1.1E-22 154.6 14.5 158 97-277 59-222 (390)
170 PRK08056 threonine-phosphate d 99.8 5.4E-18 1.2E-22 152.9 14.5 202 47-279 21-236 (356)
171 TIGR03539 DapC_actino succinyl 99.8 9.4E-18 2E-22 151.4 16.0 200 46-279 21-240 (357)
172 PRK06767 methionine gamma-lyas 99.8 5.4E-18 1.2E-22 154.3 14.3 162 88-276 61-228 (386)
173 PRK09028 cystathionine beta-ly 99.8 8.5E-18 1.8E-22 152.5 15.4 159 88-274 61-226 (394)
174 PRK10534 L-threonine aldolase; 99.8 4.8E-18 1E-22 151.8 13.7 206 49-279 2-218 (333)
175 PRK05939 hypothetical protein; 99.8 7.1E-18 1.5E-22 153.7 15.0 157 86-270 45-206 (397)
176 PLN02672 methionine S-methyltr 99.8 1.3E-17 2.8E-22 164.9 17.9 213 47-280 698-935 (1082)
177 PRK08776 cystathionine gamma-s 99.8 6.8E-18 1.5E-22 154.2 14.8 153 97-272 65-223 (405)
178 KOG2862 Alanine-glyoxylate ami 99.8 2.1E-17 4.5E-22 139.7 16.4 203 50-280 20-228 (385)
179 TIGR01324 cysta_beta_ly_B cyst 99.8 2.5E-18 5.3E-23 155.7 11.7 163 87-276 49-217 (377)
180 PLN02263 serine decarboxylase 99.8 1.9E-17 4.2E-22 151.4 17.2 173 89-275 130-319 (470)
181 cd00614 CGS_like CGS_like: Cys 99.8 8.4E-18 1.8E-22 152.3 14.8 166 87-279 39-211 (369)
182 PRK08249 cystathionine gamma-s 99.8 6.4E-18 1.4E-22 154.1 13.9 165 88-279 64-234 (398)
183 PRK08134 O-acetylhomoserine am 99.8 1.2E-17 2.7E-22 153.5 15.3 150 88-264 64-216 (433)
184 PRK01688 histidinol-phosphate 99.8 2.3E-18 5E-23 155.0 10.2 167 96-280 61-237 (351)
185 PRK06460 hypothetical protein; 99.8 9.1E-18 2E-22 152.2 14.1 165 88-279 45-215 (376)
186 PRK05166 histidinol-phosphate 99.8 7.6E-18 1.6E-22 152.7 13.6 203 47-279 37-255 (371)
187 PRK08133 O-succinylhomoserine 99.8 8.7E-18 1.9E-22 153.1 13.1 156 97-275 66-227 (390)
188 PRK03080 phosphoserine aminotr 99.8 4.9E-18 1.1E-22 154.3 11.4 196 48-279 13-216 (378)
189 PRK05613 O-acetylhomoserine am 99.8 1.2E-17 2.6E-22 153.6 14.0 155 97-272 74-233 (437)
190 PRK06176 cystathionine gamma-s 99.8 1.2E-17 2.6E-22 151.5 13.6 156 89-272 51-212 (380)
191 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.2E-17 2.7E-22 151.6 13.6 164 89-279 55-224 (380)
192 cd00609 AAT_like Aspartate ami 99.7 7.9E-17 1.7E-21 144.0 18.2 212 49-280 1-229 (350)
193 PRK08114 cystathionine beta-ly 99.7 1.2E-17 2.6E-22 151.2 12.6 163 86-274 60-229 (395)
194 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 3.3E-18 7.2E-23 154.2 8.8 165 96-274 70-257 (417)
195 TIGR03542 DAPAT_plant LL-diami 99.7 1E-16 2.3E-21 146.8 18.7 204 47-275 34-265 (402)
196 PF00155 Aminotran_1_2: Aminot 99.7 2.3E-17 5.1E-22 148.9 14.1 216 47-279 2-244 (363)
197 PLN02242 methionine gamma-lyas 99.7 2.1E-17 4.6E-22 151.5 13.7 168 87-279 75-247 (418)
198 PRK08248 O-acetylhomoserine am 99.7 4E-17 8.6E-22 150.2 15.3 156 88-270 64-224 (431)
199 PRK09440 avtA valine--pyruvate 99.7 5.1E-17 1.1E-21 149.5 16.1 222 46-279 30-271 (416)
200 PRK05994 O-acetylhomoserine am 99.7 5E-17 1.1E-21 149.6 15.9 150 97-269 68-223 (427)
201 TIGR03799 NOD_PanD_pyr putativ 99.7 3.1E-17 6.8E-22 153.5 14.7 174 87-273 124-349 (522)
202 PRK08045 cystathionine gamma-s 99.7 3.4E-17 7.4E-22 148.8 14.4 152 97-272 57-215 (386)
203 TIGR03531 selenium_SpcS O-phos 99.7 7.9E-17 1.7E-21 147.4 16.8 178 89-277 102-294 (444)
204 PLN02880 tyrosine decarboxylas 99.7 3.7E-17 8E-22 152.5 14.8 177 87-272 117-322 (490)
205 COG0076 GadB Glutamate decarbo 99.7 5.5E-17 1.2E-21 149.4 15.7 203 54-277 70-298 (460)
206 PRK00451 glycine dehydrogenase 99.7 6.9E-17 1.5E-21 150.0 16.6 172 88-277 108-289 (447)
207 PRK05968 hypothetical protein; 99.7 3E-17 6.5E-22 149.5 13.7 161 89-277 64-230 (389)
208 PRK07671 cystathionine beta-ly 99.7 4.9E-17 1.1E-21 147.5 14.8 152 97-272 55-212 (377)
209 PRK03967 histidinol-phosphate 99.7 5E-17 1.1E-21 145.5 14.7 201 47-280 19-228 (337)
210 COG1167 ARO8 Transcriptional r 99.7 2.9E-17 6.2E-22 152.4 13.6 184 83-281 127-323 (459)
211 TIGR02080 O_succ_thio_ly O-suc 99.7 4.9E-17 1.1E-21 147.6 14.4 156 89-272 52-214 (382)
212 PRK07050 cystathionine beta-ly 99.7 4.3E-17 9.2E-22 148.6 14.0 161 88-276 65-233 (394)
213 PLN02509 cystathionine beta-ly 99.7 4.3E-17 9.4E-22 150.5 14.0 156 94-273 135-296 (464)
214 PRK04635 histidinol-phosphate 99.7 1E-17 2.2E-22 150.9 9.4 164 97-279 65-237 (354)
215 TIGR00461 gcvP glycine dehydro 99.7 7.6E-17 1.7E-21 157.3 16.0 175 87-278 525-717 (939)
216 PRK07812 O-acetylhomoserine am 99.7 7.3E-17 1.6E-21 148.3 14.9 157 88-270 69-230 (436)
217 PRK06702 O-acetylhomoserine am 99.7 9.4E-17 2E-21 147.0 15.4 156 88-269 61-222 (432)
218 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 8.8E-17 1.9E-21 147.8 15.1 153 97-272 62-219 (418)
219 PRK06358 threonine-phosphate d 99.7 1.3E-16 2.7E-21 143.9 15.3 201 48-279 21-237 (354)
220 PLN02397 aspartate transaminas 99.7 9.6E-17 2.1E-21 147.9 14.6 176 84-269 87-282 (423)
221 PLN02590 probable tyrosine dec 99.7 2.1E-16 4.5E-21 147.9 16.9 180 85-273 163-371 (539)
222 PRK07269 cystathionine gamma-s 99.7 7.4E-17 1.6E-21 145.5 13.2 155 88-273 54-215 (364)
223 PRK05967 cystathionine beta-ly 99.7 6.2E-17 1.3E-21 146.7 12.7 161 87-274 63-229 (395)
224 PRK06084 O-acetylhomoserine am 99.7 1.7E-16 3.7E-21 145.8 15.6 157 89-272 59-221 (425)
225 PRK08247 cystathionine gamma-s 99.7 1.2E-16 2.5E-21 144.6 14.1 161 88-276 52-219 (366)
226 PRK07392 threonine-phosphate d 99.7 2.1E-16 4.5E-21 142.8 15.2 202 47-279 23-239 (360)
227 PRK13392 5-aminolevulinate syn 99.7 1.6E-16 3.5E-21 145.9 14.2 195 58-279 61-268 (410)
228 PRK07908 hypothetical protein; 99.7 4.3E-16 9.4E-21 140.1 16.3 196 46-279 22-227 (349)
229 PRK14808 histidinol-phosphate 99.7 2E-16 4.4E-21 141.5 13.2 198 47-280 20-226 (335)
230 PF00282 Pyridoxal_deC: Pyrido 99.7 7.1E-16 1.5E-20 139.3 16.6 178 85-273 72-278 (373)
231 PRK09064 5-aminolevulinate syn 99.7 5E-16 1.1E-20 142.6 15.7 205 48-279 48-268 (407)
232 cd00611 PSAT_like Phosphoserin 99.7 9.3E-17 2E-21 144.8 10.6 199 49-277 1-212 (355)
233 PRK04781 histidinol-phosphate 99.7 2.8E-16 6E-21 142.2 13.2 170 97-280 64-244 (364)
234 PRK08354 putative aminotransfe 99.7 1E-15 2.2E-20 135.6 15.5 179 47-270 9-196 (311)
235 PRK05367 glycine dehydrogenase 99.7 4.5E-16 9.8E-21 154.1 14.4 175 87-278 537-729 (954)
236 PRK05355 3-phosphoserine/phosp 99.7 4.7E-16 1E-20 140.2 12.4 207 48-279 4-217 (360)
237 PRK12566 glycine dehydrogenase 99.7 8.1E-16 1.7E-20 149.5 14.6 165 87-269 538-716 (954)
238 TIGR01821 5aminolev_synth 5-am 99.7 1.5E-15 3.2E-20 139.2 15.6 195 58-279 60-267 (402)
239 PRK05937 8-amino-7-oxononanoat 99.7 1.9E-15 4.1E-20 137.0 16.0 161 92-274 56-227 (370)
240 PF01212 Beta_elim_lyase: Beta 99.7 1.4E-16 3.1E-21 138.8 8.2 193 58-275 7-212 (290)
241 PRK15029 arginine decarboxylas 99.7 8.3E-16 1.8E-20 148.0 14.1 164 96-273 209-402 (755)
242 TIGR01140 L_thr_O3P_dcar L-thr 99.7 8.8E-16 1.9E-20 137.1 12.4 191 47-279 18-217 (330)
243 PLN02955 8-amino-7-oxononanoat 99.6 4.6E-15 1E-19 136.1 15.9 197 58-279 117-339 (476)
244 PRK07582 cystathionine gamma-l 99.6 3E-15 6.5E-20 135.3 13.7 158 88-276 51-215 (366)
245 PRK05664 threonine-phosphate d 99.6 1.6E-15 3.6E-20 135.3 11.8 151 97-279 54-215 (330)
246 PRK13393 5-aminolevulinate syn 99.6 7.2E-15 1.6E-19 134.9 15.8 196 58-280 60-268 (406)
247 PRK07049 methionine gamma-lyas 99.6 8.5E-15 1.8E-19 134.8 16.2 166 89-279 84-265 (427)
248 TIGR02618 tyr_phenol_ly tyrosi 99.6 5.7E-15 1.2E-19 133.9 14.4 172 84-273 67-268 (450)
249 COG2873 MET17 O-acetylhomoseri 99.6 4.5E-15 9.7E-20 128.7 12.9 168 87-281 61-233 (426)
250 TIGR01364 serC_1 phosphoserine 99.6 5.2E-15 1.1E-19 132.8 13.2 195 58-279 3-206 (349)
251 COG2008 GLY1 Threonine aldolas 99.6 8.5E-15 1.8E-19 127.1 13.4 194 58-275 12-217 (342)
252 PRK06425 histidinol-phosphate 99.6 5.2E-15 1.1E-19 132.2 12.3 189 47-280 17-217 (332)
253 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 4.4E-15 9.6E-20 134.2 11.9 165 86-277 53-226 (386)
254 PRK06434 cystathionine gamma-l 99.6 6.3E-15 1.4E-19 133.5 12.5 158 86-273 62-225 (384)
255 PRK13237 tyrosine phenol-lyase 99.6 2.3E-14 5.1E-19 130.3 15.6 172 84-273 74-275 (460)
256 COG3844 Kynureninase [Amino ac 99.6 1.4E-14 3.1E-19 123.4 12.8 211 47-277 31-249 (407)
257 COG1003 GcvP Glycine cleavage 99.6 2.1E-14 4.6E-19 126.7 13.6 175 87-279 104-294 (496)
258 PRK08637 hypothetical protein; 99.6 3.3E-14 7.1E-19 129.8 14.6 176 84-271 40-242 (388)
259 PRK13578 ornithine decarboxyla 99.6 1.3E-14 2.9E-19 138.5 11.5 166 96-274 178-372 (720)
260 COG1921 SelA Selenocysteine sy 99.6 6.9E-14 1.5E-18 123.7 15.1 204 53-279 34-244 (395)
261 PF06838 Met_gamma_lyase: Meth 99.6 1.8E-14 3.8E-19 125.3 11.1 176 89-277 55-244 (403)
262 PRK06959 putative threonine-ph 99.6 1.9E-14 4E-19 129.0 11.1 156 97-280 58-222 (339)
263 TIGR01366 serC_3 phosphoserine 99.6 2.5E-14 5.3E-19 129.2 11.9 197 49-278 5-206 (361)
264 COG0626 MetC Cystathionine bet 99.6 9.1E-14 2E-18 124.7 14.7 165 87-277 62-233 (396)
265 KOG1368 Threonine aldolase [Am 99.5 3.1E-14 6.7E-19 120.0 10.3 196 57-277 33-244 (384)
266 TIGR03811 tyr_de_CO2_Ent tyros 99.5 6.7E-13 1.5E-17 125.8 17.0 173 86-273 117-399 (608)
267 KOG0053 Cystathionine beta-lya 99.5 2.1E-13 4.6E-18 121.2 12.6 157 88-271 77-239 (409)
268 KOG1359 Glycine C-acetyltransf 99.5 6.1E-14 1.3E-18 118.0 8.5 205 47-281 68-286 (417)
269 KOG0256 1-aminocyclopropane-1- 99.5 8.4E-13 1.8E-17 115.8 14.6 185 83-278 116-326 (471)
270 PF03841 SelA: L-seryl-tRNA se 99.5 3.5E-14 7.5E-19 124.6 5.4 205 54-280 14-235 (367)
271 PLN02452 phosphoserine transam 99.5 1E-12 2.2E-17 118.4 13.3 205 48-278 8-220 (365)
272 PLN02414 glycine dehydrogenase 99.5 1.7E-12 3.7E-17 128.6 15.8 189 58-276 117-318 (993)
273 KOG0258 Alanine aminotransfera 99.4 2E-12 4.4E-17 112.7 14.1 197 58-270 87-311 (475)
274 PRK07505 hypothetical protein; 99.4 3.9E-12 8.4E-17 116.7 16.4 205 48-279 48-272 (402)
275 KOG1360 5-aminolevulinate synt 99.4 9.2E-13 2E-17 115.1 11.1 194 59-279 187-393 (570)
276 cd00610 OAT_like Acetyl ornith 99.4 2.7E-12 5.9E-17 117.9 14.4 217 47-278 37-281 (413)
277 PRK15400 lysine decarboxylase 99.4 1.6E-12 3.4E-17 124.4 12.8 162 96-273 199-383 (714)
278 KOG1357 Serine palmitoyltransf 99.4 1.5E-12 3.2E-17 115.5 11.3 198 53-280 151-368 (519)
279 PRK15399 lysine decarboxylase 99.4 3E-12 6.6E-17 122.4 13.8 160 97-273 200-383 (713)
280 PRK05367 glycine dehydrogenase 99.4 1.5E-12 3.3E-17 129.3 12.0 167 87-278 116-292 (954)
281 COG3977 Alanine-alpha-ketoisov 99.4 1.3E-11 2.9E-16 104.4 14.9 219 46-279 30-271 (417)
282 COG1982 LdcC Arginine/lysine/o 99.4 1.9E-12 4.1E-17 119.5 10.3 164 97-273 75-248 (557)
283 PRK00854 rocD ornithine--oxo-a 99.4 1.9E-11 4.2E-16 112.0 16.5 196 59-279 59-279 (401)
284 TIGR00707 argD acetylornithine 99.4 1.1E-11 2.4E-16 112.6 13.9 204 47-280 28-262 (379)
285 TIGR02617 tnaA_trp_ase tryptop 99.4 1.1E-11 2.3E-16 112.0 13.4 199 57-279 54-288 (467)
286 COG4100 Cystathionine beta-lya 99.3 2.4E-11 5.1E-16 102.9 13.3 176 89-277 66-255 (416)
287 PRK03244 argD acetylornithine 99.3 5.2E-11 1.1E-15 109.0 16.9 198 59-280 61-275 (398)
288 PRK01278 argD acetylornithine 99.3 2.7E-11 5.9E-16 110.6 13.8 195 58-280 48-267 (389)
289 PRK12462 phosphoserine aminotr 99.3 4.7E-11 1E-15 106.8 13.8 206 48-277 5-217 (364)
290 KOG0633 Histidinol phosphate a 99.3 5E-11 1.1E-15 99.1 10.7 165 99-280 76-251 (375)
291 TIGR01365 serC_2 phosphoserine 99.3 6.3E-11 1.4E-15 106.9 12.3 167 88-278 35-206 (374)
292 PTZ00125 ornithine aminotransf 99.2 3.5E-10 7.6E-15 103.6 16.0 198 58-280 48-271 (400)
293 KOG0634 Aromatic amino acid am 99.2 2.8E-10 6.2E-15 100.8 14.5 183 83-279 95-318 (472)
294 PRK04073 rocD ornithine--oxo-a 99.2 4.9E-10 1.1E-14 102.6 16.2 195 58-280 57-279 (396)
295 PRK02627 acetylornithine amino 99.2 2.2E-10 4.8E-15 104.7 12.5 195 59-280 57-274 (396)
296 TIGR00713 hemL glutamate-1-sem 99.2 7.6E-10 1.7E-14 102.2 15.3 207 47-280 49-286 (423)
297 TIGR03246 arg_catab_astC succi 99.1 2.5E-09 5.3E-14 98.0 15.4 197 58-280 52-271 (397)
298 PF02347 GDC-P: Glycine cleava 99.1 1.2E-09 2.5E-14 99.1 12.8 167 87-278 105-283 (429)
299 PRK05093 argD bifunctional N-s 99.1 2.7E-09 5.9E-14 97.9 15.0 197 58-280 57-276 (403)
300 PRK02936 argD acetylornithine 99.0 5.3E-09 1.1E-13 95.1 14.4 210 47-280 30-259 (377)
301 KOG0629 Glutamate decarboxylas 99.0 7.9E-10 1.7E-14 97.7 7.3 172 88-273 137-337 (510)
302 KOG1383 Glutamate decarboxylas 99.0 3.5E-09 7.5E-14 94.8 10.1 171 88-273 116-305 (491)
303 KOG2040 Glycine dehydrogenase 99.0 1E-08 2.2E-13 94.9 13.1 175 88-279 578-770 (1001)
304 COG0001 HemL Glutamate-1-semia 99.0 2.7E-08 5.9E-13 89.5 15.2 207 47-279 54-290 (432)
305 PRK12381 bifunctional succinyl 99.0 8.6E-09 1.9E-13 94.7 12.4 201 58-280 56-275 (406)
306 TIGR01885 Orn_aminotrans ornit 98.9 3.2E-08 6.9E-13 90.8 15.7 198 58-280 54-279 (401)
307 PRK03715 argD acetylornithine 98.9 2.3E-08 5E-13 91.4 14.0 191 59-276 54-267 (395)
308 PLN02624 ornithine-delta-amino 98.9 5.8E-08 1.3E-12 90.9 16.6 195 59-280 93-317 (474)
309 TIGR00461 gcvP glycine dehydro 98.9 1.4E-08 3.1E-13 100.1 12.1 165 88-278 105-280 (939)
310 COG0403 GcvP Glycine cleavage 98.9 2.9E-08 6.2E-13 88.3 12.4 159 96-275 124-294 (450)
311 PF12897 Aminotran_MocR: Alani 98.9 6.5E-08 1.4E-12 85.3 14.2 214 46-279 22-276 (425)
312 PRK00062 glutamate-1-semialdeh 98.9 4.3E-08 9.3E-13 90.6 13.2 208 47-279 51-287 (426)
313 PRK04013 argD acetylornithine/ 98.8 1.4E-07 3E-12 85.3 15.9 191 58-274 41-247 (364)
314 PRK04260 acetylornithine amino 98.8 9.7E-08 2.1E-12 86.8 12.5 197 59-280 46-257 (375)
315 PRK08088 4-aminobutyrate amino 98.8 2.6E-07 5.6E-12 85.5 15.3 212 59-281 59-292 (425)
316 COG4992 ArgD Ornithine/acetylo 98.8 1.3E-07 2.8E-12 84.3 12.6 207 47-279 43-275 (404)
317 PRK05964 adenosylmethionine--8 98.7 1.7E-07 3.7E-12 86.6 12.8 206 58-279 59-292 (423)
318 TIGR03372 putres_am_tran putre 98.7 4.3E-07 9.4E-12 84.1 15.3 198 58-279 92-316 (442)
319 KOG1358 Serine palmitoyltransf 98.7 1.8E-07 3.9E-12 82.3 11.3 187 59-272 110-317 (467)
320 PRK07046 aminotransferase; Val 98.7 6.3E-07 1.4E-11 83.4 15.8 195 59-279 93-307 (453)
321 COG1448 TyrB Aspartate/tyrosin 98.7 9E-07 2E-11 78.0 15.1 202 47-269 27-259 (396)
322 PRK12403 putative aminotransfe 98.7 7.9E-07 1.7E-11 82.9 15.8 93 184-279 208-314 (460)
323 KOG0628 Aromatic-L-amino-acid/ 98.7 2E-07 4.3E-12 83.6 11.0 178 85-273 106-319 (511)
324 PRK04612 argD acetylornithine 98.7 1.3E-06 2.7E-11 80.4 16.3 205 58-280 57-279 (408)
325 PRK08117 4-aminobutyrate amino 98.7 8.1E-07 1.8E-11 82.4 15.1 205 58-279 60-298 (433)
326 PLN00144 acetylornithine trans 98.6 6.9E-07 1.5E-11 81.5 14.0 95 183-280 155-259 (382)
327 PRK06058 4-aminobutyrate amino 98.6 1.9E-06 4.2E-11 80.1 16.5 209 58-280 73-311 (443)
328 PLN02482 glutamate-1-semialdeh 98.6 3.6E-06 7.9E-11 78.6 17.5 196 59-279 117-336 (474)
329 PRK13360 omega amino acid--pyr 98.6 2.6E-06 5.7E-11 79.1 16.5 207 58-279 63-307 (442)
330 PRK09792 4-aminobutyrate trans 98.6 2E-06 4.4E-11 79.4 15.6 209 58-280 57-290 (421)
331 PRK00615 glutamate-1-semialdeh 98.6 3.3E-06 7.3E-11 78.1 16.7 202 58-279 70-291 (433)
332 COG0160 GabT 4-aminobutyrate a 98.5 6.4E-06 1.4E-10 75.5 17.1 207 58-277 73-311 (447)
333 PRK06541 hypothetical protein; 98.5 3.8E-06 8.3E-11 78.3 15.5 206 58-279 69-313 (460)
334 PRK09264 diaminobutyrate--2-ox 98.5 3.4E-06 7.3E-11 78.0 15.0 206 58-275 56-286 (425)
335 PRK07495 4-aminobutyrate amino 98.5 6.6E-06 1.4E-10 76.0 16.7 207 58-280 57-290 (425)
336 PRK05769 4-aminobutyrate amino 98.5 9.6E-06 2.1E-10 75.3 17.9 205 58-278 71-311 (441)
337 PRK08360 4-aminobutyrate amino 98.5 7.8E-06 1.7E-10 76.0 17.1 206 58-279 58-295 (443)
338 PRK11522 putrescine--2-oxoglut 98.5 2.9E-06 6.3E-11 79.1 14.3 197 58-278 99-322 (459)
339 TIGR02407 ectoine_ectB diamino 98.5 7.2E-06 1.6E-10 75.6 16.7 205 58-274 52-281 (412)
340 KOG3846 L-kynurenine hydrolase 98.5 2E-07 4.3E-12 79.7 5.8 203 58-273 79-293 (465)
341 PLN02760 4-aminobutyrate:pyruv 98.5 6.9E-06 1.5E-10 77.4 16.4 92 185-279 247-352 (504)
342 PRK12566 glycine dehydrogenase 98.5 1E-06 2.2E-11 86.9 10.6 163 88-277 120-293 (954)
343 PRK08593 4-aminobutyrate amino 98.5 1.2E-05 2.6E-10 74.7 17.3 207 58-280 59-299 (445)
344 PRK06062 hypothetical protein; 98.5 5.7E-06 1.2E-10 77.0 15.1 205 58-280 70-307 (451)
345 PF05889 SLA_LP_auto_ag: Solub 98.4 3.2E-07 6.9E-12 81.7 5.8 168 90-271 54-236 (389)
346 PRK06105 aminotransferase; Pro 98.4 1.1E-05 2.4E-10 75.3 16.0 208 58-279 65-310 (460)
347 PLN02994 1-aminocyclopropane-1 98.4 9.5E-07 2.1E-11 69.7 7.1 62 84-147 88-152 (153)
348 PRK07986 adenosylmethionine--8 98.4 6.6E-06 1.4E-10 76.0 13.8 207 58-280 60-298 (428)
349 PF00202 Aminotran_3: Aminotra 98.4 2.9E-06 6.3E-11 76.1 10.9 207 59-281 34-270 (339)
350 PRK12389 glutamate-1-semialdeh 98.4 1.6E-05 3.4E-10 73.6 15.9 197 58-279 70-290 (428)
351 PRK06777 4-aminobutyrate amino 98.4 1.5E-05 3.3E-10 73.6 15.4 209 58-280 57-290 (421)
352 TIGR00508 bioA adenosylmethion 98.3 1.5E-05 3.2E-10 73.8 14.1 208 58-280 62-301 (427)
353 PRK09221 beta alanine--pyruvat 98.3 3.6E-05 7.8E-10 71.6 16.5 207 58-279 66-310 (445)
354 PRK07482 hypothetical protein; 98.3 2.8E-05 6.1E-10 72.6 15.5 206 58-279 67-312 (461)
355 COG3033 TnaA Tryptophanase [Am 98.3 7.5E-06 1.6E-10 71.6 10.6 100 180-279 167-290 (471)
356 PRK05639 4-aminobutyrate amino 98.3 2.9E-05 6.2E-10 72.5 15.2 203 58-276 70-310 (457)
357 TIGR00700 GABAtrnsam 4-aminobu 98.3 3.7E-05 8E-10 71.1 15.2 206 58-279 50-288 (420)
358 PRK06943 adenosylmethionine--8 98.3 4.8E-05 1E-09 70.9 16.0 205 58-279 71-314 (453)
359 PRK06149 hypothetical protein; 98.2 6.9E-05 1.5E-09 76.2 18.2 206 58-280 600-837 (972)
360 PRK05965 hypothetical protein; 98.2 6E-05 1.3E-09 70.4 16.4 205 58-278 63-306 (459)
361 PRK06082 4-aminobutyrate amino 98.2 6.7E-05 1.5E-09 70.1 16.7 202 58-277 88-318 (459)
362 PRK07678 aminotransferase; Val 98.2 5.5E-05 1.2E-09 70.5 15.2 200 58-279 64-305 (451)
363 PRK06173 adenosylmethionine--8 98.2 4.3E-05 9.3E-10 70.7 14.3 205 58-279 61-299 (429)
364 PRK06918 4-aminobutyrate amino 98.2 0.00011 2.4E-09 68.6 16.6 208 58-279 71-310 (451)
365 PRK06209 glutamate-1-semialdeh 98.2 4.3E-05 9.3E-10 70.8 13.7 91 183-277 173-271 (431)
366 PRK05630 adenosylmethionine--8 98.2 2.2E-05 4.8E-10 72.5 11.7 206 58-279 57-293 (422)
367 PRK07480 putative aminotransfe 98.1 0.0001 2.2E-09 68.8 15.7 91 185-278 206-310 (456)
368 PRK06148 hypothetical protein; 98.1 0.00016 3.5E-09 73.7 17.7 206 59-281 640-878 (1013)
369 PRK07481 hypothetical protein; 98.1 0.00024 5.2E-09 66.2 17.3 207 58-279 59-305 (449)
370 TIGR00709 dat 2,4-diaminobutyr 98.1 0.00017 3.6E-09 67.2 16.0 200 58-274 56-292 (442)
371 PRK07030 adenosylmethionine--8 98.1 0.00017 3.7E-09 67.5 15.8 204 58-278 64-306 (466)
372 PRK07036 hypothetical protein; 98.1 0.00032 7E-09 65.7 17.6 208 58-279 68-313 (466)
373 PRK07483 hypothetical protein; 98.1 0.00017 3.8E-09 67.0 15.6 91 185-279 186-292 (443)
374 PRK06916 adenosylmethionine--8 98.1 5.3E-05 1.1E-09 70.8 12.1 204 58-278 73-315 (460)
375 COG1932 SerC Phosphoserine ami 98.0 2.8E-05 6E-10 68.4 8.7 207 47-280 5-222 (365)
376 PRK06917 hypothetical protein; 98.0 0.00031 6.7E-09 65.4 16.0 205 58-279 48-292 (447)
377 PRK08742 adenosylmethionine--8 98.0 0.00021 4.5E-09 67.0 14.7 92 184-278 223-328 (472)
378 PRK06938 diaminobutyrate--2-ox 97.9 0.00032 7E-09 65.6 14.8 204 58-274 80-317 (464)
379 PRK06931 diaminobutyrate--2-ox 97.8 0.0011 2.3E-08 62.1 15.3 202 58-274 75-311 (459)
380 KOG1402 Ornithine aminotransfe 97.7 0.0011 2.5E-08 57.6 12.5 96 183-280 195-300 (427)
381 TIGR03251 LAT_fam L-lysine 6-t 97.5 0.0052 1.1E-07 57.0 15.9 83 184-271 205-298 (431)
382 COG0161 BioA Adenosylmethionin 97.4 0.0024 5.2E-08 58.6 11.9 95 184-281 200-309 (449)
383 TIGR00699 GABAtrns_euk 4-amino 97.3 0.0071 1.5E-07 56.5 13.4 51 183-233 237-295 (464)
384 KOG1401 Acetylornithine aminot 97.0 0.03 6.6E-07 50.3 13.6 95 183-279 192-297 (433)
385 KOG1411 Aspartate aminotransfe 96.6 0.033 7.2E-07 49.0 11.2 229 20-268 25-285 (427)
386 PF04864 Alliinase_C: Allinase 96.6 0.0027 6E-08 55.8 4.5 157 90-274 45-212 (363)
387 KOG1404 Alanine-glyoxylate ami 96.6 0.011 2.3E-07 52.8 8.0 67 212-280 235-304 (442)
388 PLN02974 adenosylmethionine-8- 96.5 0.073 1.6E-06 53.2 14.3 91 185-278 567-676 (817)
389 KOG2040 Glycine dehydrogenase 96.5 0.022 4.7E-07 54.1 9.7 155 97-275 168-330 (1001)
390 PRK08297 L-lysine aminotransfe 96.5 0.005 1.1E-07 57.4 5.6 83 184-271 212-305 (443)
391 KOG1412 Aspartate aminotransfe 95.8 0.066 1.4E-06 46.6 8.6 142 115-268 102-265 (410)
392 KOG3843 Predicted serine hydro 95.4 0.016 3.5E-07 49.2 3.5 92 176-270 135-237 (432)
393 KOG1405 4-aminobutyrate aminot 95.3 0.05 1.1E-06 48.1 6.2 72 184-255 255-341 (484)
394 KOG1403 Predicted alanine-glyo 95.1 0.11 2.3E-06 45.1 7.5 65 212-279 232-301 (452)
395 KOG2790 Phosphoserine aminotra 94.2 0.44 9.6E-06 41.1 9.1 202 47-275 7-222 (370)
396 COG2870 RfaE ADP-heptose synth 80.0 6.6 0.00014 35.8 6.7 49 183-231 129-179 (467)
397 KOG0352 ATP-dependent DNA heli 78.9 5.2 0.00011 36.8 5.7 48 195-243 113-162 (641)
398 PRK09375 quinolinate synthetas 73.8 18 0.00039 32.2 7.6 58 116-205 70-129 (319)
399 cd02067 B12-binding B12 bindin 67.1 20 0.00044 26.4 5.8 50 182-231 37-89 (119)
400 PLN02672 methionine S-methyltr 66.2 74 0.0016 33.4 11.1 132 88-236 426-570 (1082)
401 PF02310 B12-binding: B12 bind 64.2 15 0.00033 27.0 4.6 52 182-233 38-91 (121)
402 COG1504 Uncharacterized conser 64.1 22 0.00047 26.2 5.0 49 180-229 47-95 (121)
403 COG3010 NanE Putative N-acetyl 63.8 19 0.0004 29.9 5.2 69 181-257 85-156 (229)
404 PF04131 NanE: Putative N-acet 63.7 32 0.0007 28.1 6.5 72 181-258 51-122 (192)
405 COG1435 Tdk Thymidine kinase [ 60.7 65 0.0014 26.5 7.8 88 128-228 24-115 (201)
406 cd05126 Mth938 Mth938 domain. 59.3 44 0.00095 25.0 6.2 49 181-230 45-93 (117)
407 COG1087 GalE UDP-glucose 4-epi 58.0 84 0.0018 27.9 8.4 95 115-225 2-111 (329)
408 TIGR03586 PseI pseudaminic aci 57.3 90 0.0019 27.9 8.9 91 180-274 142-243 (327)
409 TIGR02026 BchE magnesium-proto 57.1 30 0.00066 32.8 6.3 53 180-233 48-102 (497)
410 smart00642 Aamy Alpha-amylase 56.6 11 0.00023 30.1 2.7 26 206-231 66-91 (166)
411 PRK02261 methylaspartate mutas 56.3 58 0.0013 25.0 6.7 50 182-231 41-93 (137)
412 PF13378 MR_MLE_C: Enolase C-t 54.7 22 0.00048 25.8 4.0 50 181-230 4-53 (111)
413 cd06919 Asp_decarbox Aspartate 54.5 35 0.00076 25.2 4.8 13 131-143 76-88 (111)
414 COG0853 PanD Aspartate 1-decar 54.2 35 0.00077 25.6 4.8 14 130-143 75-88 (126)
415 PF00128 Alpha-amylase: Alpha 53.4 9.3 0.0002 33.0 2.1 28 204-231 46-73 (316)
416 PF02603 Hpr_kinase_N: HPr Ser 53.2 20 0.00044 27.1 3.6 38 187-229 74-111 (127)
417 PF03652 UPF0081: Uncharacteri 53.0 69 0.0015 24.5 6.6 55 179-233 35-98 (135)
418 PRK09441 cytoplasmic alpha-amy 52.7 12 0.00026 35.3 2.8 28 204-231 75-102 (479)
419 PRK13396 3-deoxy-7-phosphohept 52.2 40 0.00086 30.5 5.8 58 181-238 218-286 (352)
420 PRK00366 ispG 4-hydroxy-3-meth 51.9 30 0.00065 31.1 4.9 51 180-231 87-138 (360)
421 cd02072 Glm_B12_BD B12 binding 51.8 55 0.0012 24.9 5.7 50 182-231 37-89 (128)
422 COG3414 SgaB Phosphotransferas 51.6 49 0.0011 23.6 5.1 73 197-275 3-78 (93)
423 COG0514 RecQ Superfamily II DN 51.5 21 0.00045 34.6 4.1 107 115-240 37-149 (590)
424 PF14639 YqgF: Holliday-juncti 51.4 17 0.00038 28.4 3.1 43 181-223 49-91 (150)
425 TIGR00223 panD L-aspartate-alp 50.8 43 0.00093 25.3 4.8 13 131-143 77-89 (126)
426 cd02071 MM_CoA_mut_B12_BD meth 49.9 48 0.001 24.7 5.2 50 182-231 37-89 (122)
427 PF02571 CbiJ: Precorrin-6x re 49.8 43 0.00094 28.6 5.5 92 115-227 2-97 (249)
428 PRK05449 aspartate alpha-decar 49.7 46 0.001 25.1 4.9 13 193-205 100-112 (126)
429 PRK13602 putative ribosomal pr 48.2 40 0.00087 23.4 4.2 45 184-230 16-60 (82)
430 KOG2865 NADH:ubiquinone oxidor 47.7 1.3E+02 0.0028 26.6 7.9 97 116-225 63-170 (391)
431 TIGR00789 flhB_rel flhB C-term 47.6 16 0.00036 25.4 2.1 20 212-231 29-48 (82)
432 smart00481 POLIIIAc DNA polyme 47.2 77 0.0017 20.5 6.3 47 180-228 13-59 (67)
433 TIGR00612 ispG_gcpE 1-hydroxy- 47.0 33 0.00071 30.7 4.3 36 195-230 93-128 (346)
434 PRK08057 cobalt-precorrin-6x r 46.7 84 0.0018 26.9 6.8 91 115-227 4-96 (248)
435 TIGR01501 MthylAspMutase methy 46.7 68 0.0015 24.6 5.6 43 182-224 39-81 (134)
436 KOG1371 UDP-glucose 4-epimeras 46.2 43 0.00093 29.9 4.9 106 115-230 4-126 (343)
437 COG1105 FruK Fructose-1-phosph 45.9 2.2E+02 0.0047 25.3 12.7 55 178-233 107-169 (310)
438 TIGR02370 pyl_corrinoid methyl 45.3 87 0.0019 25.6 6.5 51 181-231 121-175 (197)
439 cd00984 DnaB_C DnaB helicase C 45.3 82 0.0018 26.2 6.6 48 181-228 105-168 (242)
440 COG0296 GlgB 1,4-alpha-glucan 45.2 22 0.00047 34.7 3.3 32 202-233 205-237 (628)
441 cd03319 L-Ala-DL-Glu_epimerase 43.8 47 0.001 29.2 5.1 50 180-229 236-285 (316)
442 PRK13601 putative L7Ae-like ri 43.7 57 0.0012 22.7 4.4 45 185-231 14-58 (82)
443 PRK00109 Holliday junction res 43.6 1.1E+02 0.0023 23.6 6.3 54 180-233 39-100 (138)
444 COG0816 Predicted endonuclease 43.0 79 0.0017 24.5 5.5 53 179-231 36-97 (141)
445 cd03315 MLE_like Muconate lact 42.9 61 0.0013 27.7 5.5 50 180-229 188-237 (265)
446 TIGR00640 acid_CoA_mut_C methy 42.7 1E+02 0.0022 23.5 6.1 48 182-229 40-90 (132)
447 PF13380 CoA_binding_2: CoA bi 42.6 84 0.0018 23.2 5.5 94 124-231 16-110 (116)
448 PF14871 GHL6: Hypothetical gl 42.4 1.2E+02 0.0026 23.1 6.4 18 211-228 45-62 (132)
449 TIGR00250 RNAse_H_YqgF RNAse H 42.3 94 0.002 23.6 5.8 54 180-233 33-94 (130)
450 TIGR00629 uvde UV damage endon 42.0 30 0.00065 30.7 3.4 33 202-234 191-223 (312)
451 TIGR01060 eno phosphopyruvate 41.3 65 0.0014 29.9 5.7 45 183-227 317-361 (425)
452 PF01248 Ribosomal_L7Ae: Ribos 41.2 70 0.0015 22.4 4.8 46 184-231 20-66 (95)
453 TIGR03569 NeuB_NnaB N-acetylne 40.8 54 0.0012 29.3 4.9 95 180-277 141-247 (329)
454 PLN00196 alpha-amylase; Provis 40.5 24 0.00052 32.8 2.7 27 205-231 87-113 (428)
455 TIGR00715 precor6x_red precorr 39.9 2E+02 0.0042 24.7 8.0 92 115-226 2-95 (256)
456 COG1091 RfbD dTDP-4-dehydrorha 39.8 1.3E+02 0.0028 26.3 6.9 47 181-227 36-96 (281)
457 cd02070 corrinoid_protein_B12- 39.6 81 0.0017 25.8 5.5 51 181-231 119-173 (201)
458 cd02069 methionine_synthase_B1 39.1 1.1E+02 0.0024 25.4 6.3 51 181-231 125-177 (213)
459 cd05560 Xcc1710_like Xcc1710_l 38.7 1.4E+02 0.003 21.9 6.1 48 181-230 39-86 (109)
460 cd00248 Mth938-like Mth938-lik 38.4 1.5E+02 0.0032 21.7 6.2 48 181-230 38-86 (109)
461 PRK06683 hypothetical protein; 38.3 70 0.0015 22.2 4.2 45 185-231 17-61 (82)
462 PRK12595 bifunctional 3-deoxy- 37.8 99 0.0021 28.1 6.1 97 182-279 236-348 (360)
463 PRK00077 eno enolase; Provisio 37.6 89 0.0019 29.0 6.0 46 183-228 316-361 (425)
464 TIGR00160 MGSA methylglyoxal s 37.2 1E+02 0.0022 23.9 5.2 48 185-232 63-113 (143)
465 COG1137 YhbG ABC-type (unclass 37.2 68 0.0015 26.8 4.5 42 187-229 150-196 (243)
466 COG2515 Acd 1-aminocyclopropan 37.2 3E+02 0.0065 24.4 9.0 51 89-143 163-214 (323)
467 PRK09590 celB cellobiose phosp 36.2 50 0.0011 24.1 3.3 57 197-257 3-59 (104)
468 PLN00191 enolase 36.2 96 0.0021 29.2 5.9 49 181-229 346-394 (457)
469 COG2248 Predicted hydrolase (m 35.8 2.7E+02 0.0059 24.1 7.9 50 179-229 186-245 (304)
470 COG2099 CobK Precorrin-6x redu 35.8 2.2E+02 0.0049 24.4 7.5 91 115-227 4-97 (257)
471 cd07018 S49_SppA_67K_type Sign 35.4 79 0.0017 26.3 4.9 39 181-219 28-71 (222)
472 PRK13397 3-deoxy-7-phosphohept 35.3 1.1E+02 0.0024 26.2 5.8 56 181-236 132-197 (250)
473 PRK01018 50S ribosomal protein 35.2 87 0.0019 22.5 4.4 43 185-229 22-64 (99)
474 COG0386 BtuE Glutathione perox 35.1 1.1E+02 0.0024 24.1 5.2 47 178-224 37-89 (162)
475 COG0821 gcpE 1-hydroxy-2-methy 35.1 67 0.0015 28.7 4.4 51 180-231 81-131 (361)
476 PLN02361 alpha-amylase 35.0 34 0.00073 31.6 2.7 27 205-231 71-97 (401)
477 TIGR01361 DAHP_synth_Bsub phos 34.9 1.5E+02 0.0032 25.5 6.5 54 182-235 143-206 (260)
478 PF02571 CbiJ: Precorrin-6x re 34.7 40 0.00087 28.8 3.0 23 211-233 54-76 (249)
479 TIGR00196 yjeF_cterm yjeF C-te 34.4 74 0.0016 27.3 4.7 45 184-231 83-127 (272)
480 COG0108 RibB 3,4-dihydroxy-2-b 34.3 77 0.0017 26.1 4.4 34 195-228 156-190 (203)
481 KOG0630 Predicted pyridoxal-de 34.2 1.2E+02 0.0026 28.9 6.0 95 180-275 272-378 (838)
482 PTZ00106 60S ribosomal protein 34.2 78 0.0017 23.3 4.1 43 185-229 31-73 (108)
483 PTZ00081 enolase; Provisional 33.7 1.1E+02 0.0023 28.7 5.9 49 181-229 334-382 (439)
484 PRK05583 ribosomal protein L7A 33.4 1E+02 0.0022 22.4 4.6 44 184-229 22-65 (104)
485 PRK15452 putative protease; Pr 33.4 96 0.0021 29.0 5.5 9 183-191 44-52 (443)
486 PF00265 TK: Thymidine kinase; 33.2 1.8E+02 0.004 23.3 6.5 43 185-229 67-109 (176)
487 cd03313 enolase Enolase: Enola 33.1 1.1E+02 0.0024 28.3 5.8 47 182-228 315-361 (408)
488 PF07905 PucR: Purine cataboli 33.0 1.4E+02 0.003 22.2 5.4 35 193-228 70-104 (123)
489 cd07022 S49_Sppa_36K_type Sign 32.6 1.5E+02 0.0033 24.5 6.1 88 183-279 26-123 (214)
490 PRK09505 malS alpha-amylase; R 32.6 38 0.00083 33.6 2.8 24 208-231 290-313 (683)
491 cd00308 enolase_like Enolase-s 32.5 1.1E+02 0.0025 25.3 5.4 50 181-230 154-203 (229)
492 PF04001 Vhr1: Transcription f 31.9 1.5E+02 0.0033 20.8 4.8 74 18-102 7-82 (95)
493 cd02065 B12-binding_like B12 b 31.7 1.5E+02 0.0032 21.6 5.4 53 182-234 37-91 (125)
494 PF13727 CoA_binding_3: CoA-bi 31.4 59 0.0013 25.2 3.4 44 183-227 129-172 (175)
495 COG1066 Sms Predicted ATP-depe 31.2 1.1E+02 0.0024 28.4 5.3 48 181-228 154-215 (456)
496 PRK10785 maltodextrin glucosid 31.2 40 0.00086 32.9 2.7 49 183-231 177-247 (598)
497 TIGR03677 rpl7ae 50S ribosomal 30.9 1.1E+02 0.0025 22.7 4.6 46 184-230 31-76 (117)
498 cd05564 PTS_IIB_chitobiose_lic 30.7 87 0.0019 22.3 3.8 55 197-257 1-55 (96)
499 cd00532 MGS-like MGS-like doma 30.6 1.3E+02 0.0028 21.9 4.8 46 186-231 58-107 (112)
500 PRK03620 5-dehydro-4-deoxygluc 30.6 2E+02 0.0042 25.3 6.8 54 174-228 18-81 (303)
No 1
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-45 Score=316.53 Aligned_cols=242 Identities=52% Similarity=0.833 Sum_probs=229.4
Q ss_pred ccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 023191 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (286)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (286)
..+...+++++..+.++..++.+.|+|+++||++|+.|++++.+.+.++|.+|||+.+||+++++++++|+.+.++.+++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 34566899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCH
Q 023191 105 FRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184 (286)
Q Consensus 105 ~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 184 (286)
||++. ++|+..||+.||++++.++++|||+|+-.+..|++|++.+. .+.+.|..++.++++++++++.+|+
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDy 155 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDY 155 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCH
Confidence 99998 57999999999999999999999999999999999999885 4567788889999999988999999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCC
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 264 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~ 264 (286)
|++++.+.+++||+|+...|.++...|++++.+||++.|+++++|.||.+|++..+.+++|+.++|++++|+||+|.||+
T Consensus 156 D~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPr 235 (413)
T COG0112 156 DEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPR 235 (413)
T ss_pred HHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCC
Confidence 99999999999999999899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEec-chh
Q 023191 265 GAMIFFRK-GVK 275 (286)
Q Consensus 265 gG~l~~~~-~~~ 275 (286)
||+|++++ ++.
T Consensus 236 GG~Il~~~eel~ 247 (413)
T COG0112 236 GGIILTNDEELA 247 (413)
T ss_pred ceEEEeccHHHH
Confidence 99999997 444
No 2
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=6.7e-45 Score=325.01 Aligned_cols=257 Identities=54% Similarity=0.934 Sum_probs=208.3
Q ss_pred cccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC
Q 023191 28 EVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL 107 (286)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~ 107 (286)
+..+|++++.+.++..++.+.|+|+++||++|+.+++++...+.++|.+|||+.++|++++.++++|+.+.++++++||+
T Consensus 2 ~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~ 81 (399)
T PF00464_consen 2 KEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGA 81 (399)
T ss_dssp HHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-
T ss_pred cccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHH
Q 023191 108 DPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQL 187 (286)
Q Consensus 108 ~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l 187 (286)
+++.|.++|.+.||+.|+++++.++++|||+|+..+..+++|++.++....+.+...+..+..++++++++++.+|++++
T Consensus 82 ~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l 161 (399)
T PF00464_consen 82 EPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDEL 161 (399)
T ss_dssp STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHH
T ss_pred CcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHH
Confidence 99999999999999999999999999999999999999999998887654434445666678888889988899999999
Q ss_pred HHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceE
Q 023191 188 EKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAM 267 (286)
Q Consensus 188 ~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~ 267 (286)
++.+.+++||+|+++.|+++...|++++.+||++.|+++++|.+|.+|++..+..++|++++|++++|+||+|.||+||+
T Consensus 162 ~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrggi 241 (399)
T PF00464_consen 162 EKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGGI 241 (399)
T ss_dssp HHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-EE
T ss_pred HHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecchhhhhccCCcc
Q 023191 268 IFFRKGVKEINKQGKEV 284 (286)
Q Consensus 268 l~~~~~~~~~~~~~~~~ 284 (286)
|++|+..++.+|+++.+
T Consensus 242 I~~~~~~~~~~~~~~~~ 258 (399)
T PF00464_consen 242 ILTNKGSKNVDKKGKEI 258 (399)
T ss_dssp EEES-SEEEE-TTS-EE
T ss_pred EEEcCCccccCCccccc
Confidence 99998777777777653
No 3
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-44 Score=304.33 Aligned_cols=268 Identities=76% Similarity=1.202 Sum_probs=253.6
Q ss_pred CCchhhccccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHH
Q 023191 17 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (286)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (286)
.+..++++..+...+|+++..+..|..|+...|.|+++||+++..|.+|+...+.|.|.+|||+.+||+++++++++|..
T Consensus 11 ~~~~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~L 90 (477)
T KOG2467|consen 11 AAVIKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELL 90 (477)
T ss_pred hhhhhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHH
Confidence 44567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
++++..+.|+++++.||++|+..||+.||+++..+++.|+|+|+=.+..+++|++.+|..-.+.+.....-++..|+.++
T Consensus 91 Cq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~ 170 (477)
T KOG2467|consen 91 CQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVD 170 (477)
T ss_pred HHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeC
Confidence 99999999999999999999999999999999999999999999999999999999998777667667777888999999
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCC
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 256 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~ 256 (286)
+.++.+|+|.||+....++||+|+...|.+.+.++.+++.+||.+.|++++.|.||..|++..++.++||+++|+|++++
T Consensus 171 ~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTT 250 (477)
T KOG2467|consen 171 PSTGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTT 250 (477)
T ss_pred CCCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccc
Confidence 99999999999999998999999877888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceEEEEecchhhhh-ccCCcc
Q 023191 257 HKSLRGPRGAMIFFRKGVKEIN-KQGKEV 284 (286)
Q Consensus 257 ~K~l~gp~gG~l~~~~~~~~~~-~~~~~~ 284 (286)
||+|.||+||+|++|+.++... |+|+.|
T Consensus 251 HKsLRGPRg~mIFyRkGvk~~~~k~g~~i 279 (477)
T KOG2467|consen 251 HKSLRGPRGAMIFYRKGVKSIKPKQGKEI 279 (477)
T ss_pred cccccCCcceeEEEeccCCcCCCCCCCcc
Confidence 9999999999999999999988 567765
No 4
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=4.8e-43 Score=320.54 Aligned_cols=256 Identities=60% Similarity=1.018 Sum_probs=233.5
Q ss_pred hhhccccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 20 PKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
.++.++.++..+|++++.+.+|..++.+.|+|+++||++++.|++++...+.++|.+||++.+||++++.++++|..+.+
T Consensus 122 ~~~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~e 201 (586)
T PLN02271 122 RAWGNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCE 201 (586)
T ss_pred HHHHhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHH
Confidence 33445567888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccc-cccccceeeeEEEecccCCC
Q 023191 100 RALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNES 178 (286)
Q Consensus 100 ~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 178 (286)
+.+++||++++.|+++|+..||+.|+++++.++++|||+|+..+.+|++|+++++.... ..+...|..++.++++++.+
T Consensus 202 ra~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~ 281 (586)
T PLN02271 202 RALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ 281 (586)
T ss_pred HHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc
Confidence 99999999998898999999999999999999999999999999999999988764321 23556777788899888877
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCC
Q 023191 179 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK 258 (286)
Q Consensus 179 ~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K 258 (286)
++.+|++++++.+..++||+|+++.+.++...|+++|.++|+++|+++++|+||.+|.+..+.++.++.++|++++++||
T Consensus 282 ~g~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHK 361 (586)
T PLN02271 282 TGYIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHK 361 (586)
T ss_pred cCccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcc
Confidence 89999999999666669999999877788889999999999999999999999999999999999998899999999999
Q ss_pred CCCCCCceEEEEecchh
Q 023191 259 SLRGPRGAMIFFRKGVK 275 (286)
Q Consensus 259 ~l~gp~gG~l~~~~~~~ 275 (286)
||.||+||+|++++++.
T Consensus 362 tLrGPrGG~I~~r~~~~ 378 (586)
T PLN02271 362 SLRGPRGGIIFYRKGPK 378 (586)
T ss_pred cCCCCCceEEEeccccc
Confidence 99999999999987655
No 5
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.4e-38 Score=294.47 Aligned_cols=262 Identities=79% Similarity=1.219 Sum_probs=229.2
Q ss_pred ccCCCchhhccccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHH
Q 023191 14 KNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (286)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (286)
++-+.++++....++..+|++++.+.++..++.+.|+|+++||++|+.+++++...+.++|.+|+++.++|+++...+++
T Consensus 2 ~~~~~~~~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~l 81 (475)
T PLN03226 2 KSMVSVPKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQI 81 (475)
T ss_pred cchhhhhhcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHH
Confidence 45667888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 94 ~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
|+.++++.+++|+.+.+.|.+++.+.||+.++++++.++++|||+|+..+..+++|++..+......+...+..+..+++
T Consensus 82 E~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y 161 (475)
T PLN03226 82 ETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPY 161 (475)
T ss_pred HHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeee
Confidence 99999999999999887766677789999999999999999999999988888888776543222223344444555677
Q ss_pred ccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEE
Q 023191 174 RLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (286)
..+.+++.+|+++|++++.++++|+|+++.++++...|+++|.++|+++|+++++|+||.+|.+..+..+.++.++|+++
T Consensus 162 ~~~~~~g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~ 241 (475)
T PLN03226 162 RLDESTGLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVT 241 (475)
T ss_pred eecCCCCCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEE
Confidence 77767889999999999986688988776778898999999999999999999999999999999888777777899999
Q ss_pred eCCCCCCCCCCceEEEEecchh
Q 023191 254 TTTHKSLRGPRGAMIFFRKGVK 275 (286)
Q Consensus 254 ~s~~K~l~gp~gG~l~~~~~~~ 275 (286)
+++||||+||+||++++++++.
T Consensus 242 ~t~hK~L~GP~Gg~I~~~~~~~ 263 (475)
T PLN03226 242 TTTHKSLRGPRGGMIFFRKGPK 263 (475)
T ss_pred ecCcccccCCCceEEEEchhhc
Confidence 9999999999999999988655
No 6
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.6e-38 Score=289.79 Aligned_cols=247 Identities=37% Similarity=0.645 Sum_probs=220.4
Q ss_pred ccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 023191 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (286)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (286)
+.+...+|++++.+.+|..|+.+.|+|+++||++|+.+++++...+.++|.+|||+.++|++++.++++|..+.++.+++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 44677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcceeEEeCCChHHHHHHHHHhcCC-------------------------------CCeEEeccCCCCcccCcc
Q 023191 105 FRLDPEKWGVNVQSLSGSPSNFQVYTALLKP-------------------------------HDRIMALDLPHGGHLSHG 153 (286)
Q Consensus 105 ~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~-------------------------------Gd~Vl~~~~~~~~~~~~~ 153 (286)
||++. ++|...||+.|+++++.++++| ||+|+..+..+++|++.+
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99988 5799999999999999999987 899999999999999887
Q ss_pred ccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCccCHHHHHHHHHhcCCEEEEeccc
Q 023191 154 YQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAH 232 (286)
Q Consensus 154 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n~g~~~~l~~I~~ia~~~~~~vivD~a~ 232 (286)
+ ...+.+..+...+++++.+++.+|++++++++++ +++.|+++ .+|++...|+++|.++|+++|+++++|+||
T Consensus 184 ~-----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~-~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH 257 (493)
T PRK13580 184 F-----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALARE-FKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAH 257 (493)
T ss_pred c-----ccchhhheeeeEecccCcccCccCHHHHHHHHhh-cCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECch
Confidence 5 3345565567777788867789999999999998 55555555 888888889999999999999999999999
Q ss_pred cccccccCCCC---CCCCcceEEEeCCCCCCCCCCceEEEEecchhhhhccC
Q 023191 233 ISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 281 (286)
Q Consensus 233 ~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~~~ 281 (286)
++|.+..+... .++.++|++++|+||||+||+||++++++++.+.+.++
T Consensus 258 ~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~~a 309 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKKEYADAVDKG 309 (493)
T ss_pred hhceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecHHHHHHHhhC
Confidence 99999866643 44557999999999999999999999999988777544
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=5e-36 Score=277.74 Aligned_cols=252 Identities=67% Similarity=1.112 Sum_probs=212.3
Q ss_pred cccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (286)
+..++..++++++.+.++..++.+.|+|.++||++|+.+++++...+.++|.+|+|+.+++.+....+.+|+.+++.+++
T Consensus 12 ~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~ 91 (452)
T PTZ00094 12 NQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALE 91 (452)
T ss_pred hhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHH
Confidence 34467789999999999888888999999999999999999999999999999999999999999999999889999999
Q ss_pred HCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCC
Q 023191 104 AFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (286)
Q Consensus 104 ~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 183 (286)
+||+++++|..++.+++|+.++.+++.+++++||+|++.+.+|+++.+++...........+..+...+++++ .++.+|
T Consensus 92 lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~-~~g~id 170 (452)
T PTZ00094 92 AFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN-EKGLID 170 (452)
T ss_pred HhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC-CCCCcC
Confidence 9999876543444455676699878999999999999999999999887653322222233333444555555 358999
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCC
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp 263 (286)
++++++++++.+++++++..+++|...|+++|.++|+++|+++++|++|++|.+..+..+.++.++|++++|+||||+||
T Consensus 171 ~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP 250 (452)
T PTZ00094 171 YDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGP 250 (452)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCC
Confidence 99999999766788888766679999999999999999999999999999999988877666668999999999999999
Q ss_pred CceEEEEecchhh
Q 023191 264 RGAMIFFRKGVKE 276 (286)
Q Consensus 264 ~gG~l~~~~~~~~ 276 (286)
+||++++++++.+
T Consensus 251 ~Gg~l~~~~~~~~ 263 (452)
T PTZ00094 251 RSGLIFYRKKVKP 263 (452)
T ss_pred CceEEEEecccch
Confidence 9999999876544
No 8
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=1.4e-31 Score=246.16 Aligned_cols=246 Identities=54% Similarity=0.825 Sum_probs=197.5
Q ss_pred ccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 023191 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (286)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (286)
..++..+|++++.++.+..+++..++|.++++++|+.|++++..++.++|..++++.+++.+.+....+++.+++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~ 83 (416)
T PRK00011 4 DNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKEL 83 (416)
T ss_pred hhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 45688999999999988778889999999999999999999988887777777777777777777788888788999999
Q ss_pred CCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCH
Q 023191 105 FRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 184 (286)
Q Consensus 105 ~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 184 (286)
+|++.. .|++++|+.++..++.++++|||+|++++++|++++....... ....|.++ +.++.+.+++.+|+
T Consensus 84 ~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~---~~~~g~~~--~~~~~~~~~~~~d~ 154 (416)
T PRK00011 84 FGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVN---FSGKLYNV--VSYGVDEETGLIDY 154 (416)
T ss_pred hCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccc---cccceeeE--eecCcCcccCCcCH
Confidence 999763 4878888777777889999999999999999988765433111 11223333 34445544688999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCC
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 264 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~ 264 (286)
+++++++++++|++|+++.+++|...|+++|.++|+++|+++|+|++|+.|.+..+..+..+.++|++++|+||+|+||+
T Consensus 155 ~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~ 234 (416)
T PRK00011 155 DEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPR 234 (416)
T ss_pred HHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCC
Confidence 99999997658999999767788778999999999999999999999998876544333344468999999999999999
Q ss_pred ceEEEEec-chhhhhc
Q 023191 265 GAMIFFRK-GVKEINK 279 (286)
Q Consensus 265 gG~l~~~~-~~~~~~~ 279 (286)
||++++++ ++.+..+
T Consensus 235 gg~i~~~~~~~~~~l~ 250 (416)
T PRK00011 235 GGLILTNDEELAKKIN 250 (416)
T ss_pred ceEEEeCCHHHHHHHH
Confidence 99999964 6665544
No 9
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=1.8e-31 Score=244.21 Aligned_cols=243 Identities=58% Similarity=0.901 Sum_probs=199.8
Q ss_pred ccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC
Q 023191 29 VVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD 108 (286)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 108 (286)
+++++++..+.++...+++.++|.++++++++.|++++.+.+..+|..++++.++|++....+++++.+++++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 56889999999987778889999999999999999999998877787788888888888899999998999999999997
Q ss_pred CCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHH
Q 023191 109 PEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 188 (286)
Q Consensus 109 ~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~ 188 (286)
.. .|++++|+.++.+++.++++|||+|+++++.|+++...+... .+...|.+++.++++.+.+++.+|+++++
T Consensus 82 ~~----~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l~ 154 (402)
T cd00378 82 YA----NVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDALE 154 (402)
T ss_pred ce----eeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHHH
Confidence 63 477788877888899999999999999999988876543310 13345655666665544336899999999
Q ss_pred HHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEE
Q 023191 189 KSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268 (286)
Q Consensus 189 ~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l 268 (286)
+.+.++++++|+++.+++|...++++|+++|++||+++|+|++|+.|.+..+..+.++.++|++++|+||||+||+||++
T Consensus 155 ~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i 234 (402)
T cd00378 155 KMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLI 234 (402)
T ss_pred HHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEE
Confidence 99975589999988667888889999999999999999999999888765443333334689999999999999999999
Q ss_pred EEec-chhhhh
Q 023191 269 FFRK-GVKEIN 278 (286)
Q Consensus 269 ~~~~-~~~~~~ 278 (286)
++++ ++.+..
T Consensus 235 ~~~~~~~~~~l 245 (402)
T cd00378 235 LTRKGELAKKI 245 (402)
T ss_pred EeccHHHHHHH
Confidence 9987 665544
No 10
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=2.2e-31 Score=244.04 Aligned_cols=244 Identities=51% Similarity=0.803 Sum_probs=201.3
Q ss_pred hccccccccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 023191 22 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (286)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 101 (286)
|+++.++..++++++.+.++..++.+.+||.++||+++|.+++++...+.++|..|+++.+.+++.+...+||+.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence 55777889999999999999888889999999999999999999999987778888999999988888999998888899
Q ss_pred HHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCC
Q 023191 102 LEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 181 (286)
Q Consensus 102 ~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 181 (286)
++++|.+. +.+.+.||+.|+.+++.++++|||+|++++..|.++...+.. ....+.....+.++.+..++.
T Consensus 84 a~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~ 154 (416)
T PRK13034 84 KQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAK-----VSLSGKWYNAVQYGVDRLTGL 154 (416)
T ss_pred HHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCc-----ceeccceeeeEEcccccccCC
Confidence 99999876 235567888899989999999999999999888774322210 011122222234455545678
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCC
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 261 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~ 261 (286)
+|++++++.+...++|+|++..+.+|...|+++|.++|++||+++++|+||+.|.+..+....++.++|++++|+||+++
T Consensus 155 ~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~ 234 (416)
T PRK13034 155 IDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLR 234 (416)
T ss_pred cCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCC
Confidence 99999999986657899888656678888999999999999999999999999998877666565679999999999999
Q ss_pred CCCceEEEEecch
Q 023191 262 GPRGAMIFFRKGV 274 (286)
Q Consensus 262 gp~gG~l~~~~~~ 274 (286)
||.||+++++++.
T Consensus 235 g~~GG~v~~~~~~ 247 (416)
T PRK13034 235 GPRGGMILTNDEE 247 (416)
T ss_pred CCCCeEEEECcHH
Confidence 9999999987754
No 11
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.3e-29 Score=228.35 Aligned_cols=214 Identities=21% Similarity=0.245 Sum_probs=173.7
Q ss_pred ceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHH
Q 023191 49 LELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (286)
Q Consensus 49 i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (286)
+-|+..-. ..|..|.+++.++....+ .+.+...+.......+..++.|+.+++++|+++. .+|++|.|+| ++.
T Consensus 24 vylD~aa~~~~p~~V~~a~~~~~~~~~--an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~---~eIvft~~tT~aln 98 (405)
T COG0520 24 VYLDNAATSQKPQAVLDAVAEYYRRYN--ANVHRGAHTLAEEATDLYEAAREAVARFLNADSS---DEIVFTRGTTEALN 98 (405)
T ss_pred EEecCcccccCCHHHHHHHHHHHHhhc--CCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCChhHHHH
Confidence 44443333 469999999998875522 2222212333455667888899999999999852 2599999999 666
Q ss_pred HHHHHh---cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 127 QVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 127 ~~l~a~---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
.+..++ +.+||+|++.+.+|+++..|+....+ ..|.+++.+| ++ +++.+|++++++.+++ +||+|.++
T Consensus 99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~----~~Ga~v~~i~--~~-~~g~~~~~~~~~~i~~-~Tklvais~ 170 (405)
T COG0520 99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAK----RTGAKVRVIP--LD-DDGLLDLDALEKLITP-KTKLVALSH 170 (405)
T ss_pred HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHH----hcCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CceEEEEEC
Confidence 577777 69999999999999999988874433 3465677776 44 6789999999999988 99999998
Q ss_pred CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 203 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
-|| +|.+.|+++|+++||++|++|++|++|++|+.+.++.... +|++++|+||||+||.| |++++|+++.+.+
T Consensus 171 vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~---~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l 245 (405)
T COG0520 171 VSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELG---CDFLAFSGHKWLLGPTGIGVLYVRKELLEEL 245 (405)
T ss_pred ccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcC---CCEEEEcccccccCCCceEEEEEchHHHhhc
Confidence 777 8899999999999999999999999999999999987777 99999999999999999 9999999877654
No 12
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.3e-27 Score=217.00 Aligned_cols=215 Identities=18% Similarity=0.217 Sum_probs=169.9
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.|+|..|++ ++|+.+++++.+++.+... .|+...+..+||+++.+++.+.+|++.+. ..+|++|+|++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-------~Y~~~~G~~~LReaia~~~~~~~~~~~~~-~~eiivt~Ga~~ 100 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-------HYTPSAGIPELREAIAEKYKRRYGLDVDP-EEEIIVTAGAKE 100 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-------CCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CCeEEEeCCHHH
Confidence 4899999988 6799999999998876211 23466899999999999999999864332 02599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.+++.++++|||+|++++ |.|+.|...+.+.|+++..+++....++|.+|+++|++++++ +||+|+++
T Consensus 101 al~~~~~a~~~pGDeVlip~--------P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~ 171 (393)
T COG0436 101 ALFLAFLALLNPGDEVLIPD--------PGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNS 171 (393)
T ss_pred HHHHHHHHhcCCCCEEEEeC--------CCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeC
Confidence 98889999999999999999 777777777889998887777533214799999999999999 99999998
Q ss_pred CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccC-CCCCCCC--c---ceEEEeCCCCCC--CCCCceEEEE
Q 023191 203 ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFE--Y---ADVVTTTTHKSL--RGPRGAMIFF 270 (286)
Q Consensus 203 ~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~--~---~D~v~~s~~K~l--~gp~gG~l~~ 270 (286)
|+| ||.+. .+++|+++|++||++||+|++ +.+.+..+ .+.+.+. . .-+.+.|++|++ .|+|.|++++
T Consensus 172 P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi-Y~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~ 250 (393)
T COG0436 172 PNNPTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVG 250 (393)
T ss_pred CCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh-hhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeec
Confidence 666 77444 588999999999999999999 45555544 2333332 1 237788999975 7888899999
Q ss_pred e-cchhhhhc
Q 023191 271 R-KGVKEINK 279 (286)
Q Consensus 271 ~-~~~~~~~~ 279 (286)
+ .++.+..+
T Consensus 251 ~~~~l~~~~~ 260 (393)
T COG0436 251 PPEELIAALR 260 (393)
T ss_pred ChHHHHHHHH
Confidence 9 66665544
No 13
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.95 E-value=6.7e-27 Score=204.40 Aligned_cols=238 Identities=16% Similarity=0.111 Sum_probs=181.5
Q ss_pred cccccccChHHHHHHHHHHHHHHcCce-ecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKARQWKGLE-LIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (286)
++.+....++++..+...... ....+ |.+|.+ ++|+.|.+++.+++.... ...|+...+.++|++++++.
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e-~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~------~~qYt~~~G~p~L~~aL~k~ 81 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAE-HKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPS------TNQYTRGYGLPQLRKALAKA 81 (420)
T ss_pred cccccccCCcHHHHHHHHHHh-cCCCCcccCCCCCCCCcHHHHHHHHHHhccch------hccccccCCchHHHHHHHHH
Confidence 556677778889888876433 34555 888877 578899999988876632 22234445778899999999
Q ss_pred HHHHCCC--CCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc---
Q 023191 101 ALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR--- 174 (286)
Q Consensus 101 ~~~~~g~--~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 174 (286)
++.++|. +++ .+|++|+|+. ++..++++++++||+|++.+ |.|..|...+.++|...+.++..
T Consensus 82 ~se~~~~~~~~~---~eVlVT~GA~~ai~~~~~~l~~~GDeVii~e--------P~fd~Y~~~~~maG~tpv~v~~~~~~ 150 (420)
T KOG0257|consen 82 YSEFYGGLLDPD---DEVLVTAGANEAISSALLGLLNPGDEVIVFE--------PFFDCYIPQVVMAGGTPVFVPLKPKE 150 (420)
T ss_pred HHHHhccccCCc---ccEEEecCchHHHHHHHHHHcCCCCEEEEec--------CcchhhhhHHhhcCCcceeecccccc
Confidence 9998887 443 3699999999 88889999999999999999 66666666788999888888755
Q ss_pred --cCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCC---ccCHHHHHHHHHhcCCEEEEeccccccccccCCCC----
Q 023191 175 --LNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YAR---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP---- 243 (286)
Q Consensus 175 --~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~---- 243 (286)
...++|.+|.++++.++++ +||+|++| |+| +|. ...+++|++||++||++||+|+++-.-..+...+.
T Consensus 151 g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as 229 (420)
T KOG0257|consen 151 GNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS 229 (420)
T ss_pred ccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence 1235799999999999999 99999998 777 774 45699999999999999999999654333322121
Q ss_pred CCCC-cceEEEeCCCCCC--CCCCceEEEEecchhhhhcc
Q 023191 244 SPFE-YADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 244 ~~~~-~~D~v~~s~~K~l--~gp~gG~l~~~~~~~~~~~~ 280 (286)
.|-. ...+-++|+.|+| .||+-|++++.+.+....++
T Consensus 230 lPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~ 269 (420)
T KOG0257|consen 230 LPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFP 269 (420)
T ss_pred CCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHH
Confidence 1111 2668899999987 67888999997766665553
No 14
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.93 E-value=1.4e-25 Score=197.61 Aligned_cols=199 Identities=20% Similarity=0.311 Sum_probs=161.4
Q ss_pred CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh--c
Q 023191 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--L 133 (286)
Q Consensus 57 ~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~--~ 133 (286)
++.++++++|..++...| |+|.+.+.-+ ....++-+..|+.+++++|++++ +|++|||++ ++.+++.+. .
T Consensus 12 p~~~~v~~~m~~~~~~~f--gNPsS~H~~G-~~A~~~ve~AR~~iA~llga~~~----eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 12 PVDPEVLEAMLPYLTEVF--GNPSSLHSFG-REARKAVEEAREQIAKLLGADPE----EIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred CCCHHHHHHHHHHHHhhc--CCccchhHhH-HHHHHHHHHHHHHHHHHhCCCCC----eEEEecCCcHHHHHHHHhhHHh
Confidence 678999999999998766 5555422222 33456667889999999999885 599999999 666566652 2
Q ss_pred ----CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CC
Q 023191 134 ----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YA 207 (286)
Q Consensus 134 ----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g 207 (286)
..|.+|+++..+|+++..+...+.. .|.++..+| ++ .++.+|+++|++++++ +|.+|.+- .+| +|
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~-----~g~~Vtyl~--V~-~~G~v~~e~L~~al~~-~T~LVSim~aNnE~G 155 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVLNTCRYLER-----QGFEVTYLP--VD-SNGLVDLEQLEEALRP-DTILVSIMHANNETG 155 (386)
T ss_pred hhcccCCCeEEEcccccHHHHHHHHHHHh-----cCCeEEEeC--CC-CCCeEcHHHHHHhcCC-CceEEEEEecccCee
Confidence 2588999999999999887764422 344455565 55 5799999999999998 89888886 444 89
Q ss_pred CccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
+++|+++|.++|+++++++++|++|++|.++.++.... +|++.+|.|| |+||+| |++++++...
T Consensus 156 ~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~---vD~ls~SaHK-~~GpkGiGaLyv~~~~~ 220 (386)
T COG1104 156 TIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELG---VDLLSFSAHK-FGGPKGIGALYVRPGVR 220 (386)
T ss_pred ecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccC---cceEEeehhh-ccCCCceEEEEECCCCc
Confidence 99999999999999999999999999999998887776 9999999999 999999 9999977543
No 15
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=5.1e-25 Score=199.15 Aligned_cols=205 Identities=18% Similarity=0.265 Sum_probs=154.6
Q ss_pred CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHH
Q 023191 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (286)
Q Consensus 53 ~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a 131 (286)
++..++|+.+++++.+++.+.+ +++....+.......++.+.+++.+++++|++++ +|++++|++ ++..++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVEKARAQVAALIGADPK----EIIFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 3445789999999988875533 2332100111122345566788999999999764 499999888 65545544
Q ss_pred h----cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 023191 132 L----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (286)
Q Consensus 132 ~----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n- 205 (286)
+ .++||+|++++.+|+++..++.. ....|.+++.++ .+ +++.+|++++++++++ ++++++++ ++|
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~~~-----~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~ 150 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSCRH-----LQQEGFEVTYLP--VK-SDGLVDLDELAAAIRP-DTALVSVMAVNNE 150 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHHHH-----HHhcCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence 3 57899999999888886544331 123455565565 34 4678999999999987 89999987 555
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhh
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (286)
+|...|+++|.++||++|+++++|++|++|.++.++..++ +|++++|+||| +||.| |++++++++..
T Consensus 151 tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~---~D~~~~s~hK~-~gp~G~g~l~v~~~~~~ 218 (364)
T PLN02651 151 IGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLG---VDLMSISGHKI-YGPKGVGALYVRRRPRV 218 (364)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCC---CCEEEechhhh-CCCCceEEEEEcCCCCC
Confidence 7889999999999999999999999999999887776665 99999999996 79999 99999987554
No 16
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.93 E-value=7.3e-25 Score=193.90 Aligned_cols=205 Identities=20% Similarity=0.304 Sum_probs=162.9
Q ss_pred cCceecCCC-CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 47 KGLELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 47 ~~i~L~~~e-~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
+.+.|+.+- .++++.|.++|.+++...+ ++|..+.| +.+..+. -++.|+.+++++|+++. +|+||+|+| +
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~~y-~w~~~~~-~E~aR~~VAklInAd~~----dIiFts~ATEs 114 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSRSY-GWKAEDA-VEAAREQVAKLINADPS----DIVFTSGATES 114 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCcccc-chhhhHH-HHHHHHHHHHHhCCCCC----cEEEeCCchHH
Confidence 456666544 3789999999999887755 55655422 2222222 34678999999999986 499999999 6
Q ss_pred HHHHHHHh-cCCCC----eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEE
Q 023191 125 NFQVYTAL-LKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (286)
Q Consensus 125 ~~~~l~a~-~~~Gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v 199 (286)
+-+++..+ ...+| +|++.+.+|+.....+..+.. .|..++.+| ++ +++.+|++.+++.|++ +|++|
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~-----~g~~Vt~lp--v~-~~~~~d~~~~~~~i~~-~T~lv 185 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQE-----EGLEVTYLP--VE-DSGLVDISKLREAIRS-KTRLV 185 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHHHHHHh-----cCeEEEEec--cC-ccccccHHHHHHhcCC-CceEE
Confidence 66688888 56777 999999999998766554333 333455555 54 6789999999999999 99999
Q ss_pred EEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEec
Q 023191 200 VAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (286)
Q Consensus 200 ~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~ 272 (286)
.+. -+| .|...|+++|.++|++.++.+++|+||+.|.++.|+.... +|++++++|||+ ||+| |+|+++.
T Consensus 186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln---~D~~s~s~HK~y-gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELN---ADFLSISAHKIY-GPPGIGALYVRR 257 (428)
T ss_pred EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcC---chheeeeccccc-CCCcceEEEEcc
Confidence 997 444 7799999999999999999999999999999999998888 999999999966 6777 9999996
No 17
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.92 E-value=1.8e-24 Score=196.00 Aligned_cols=211 Identities=19% Similarity=0.240 Sum_probs=162.9
Q ss_pred cCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHH
Q 023191 52 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYT 130 (286)
Q Consensus 52 ~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~ 130 (286)
+++..++|+.|++++.+.+.+.+ +++....+.......++.+.+++.+++++|+++++ +|++++|++ ++..++.
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~---~v~~~~~~t~a~~~~~~ 79 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFY--ANPHSGVSHRSREFAEILEEAREALAKLLGAPPDE---EVVFTSNGTEALNAVAS 79 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSG--SSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTE---EEEEESSHHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhh--hcCcccccchhhhhhHHHHHHHHHHHHhcCCcccc---ccccccccchhhhhhhh
Confidence 34556789999999998876544 22211112223445677778999999999998732 589989988 7777888
Q ss_pred Hh---cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C-CC
Q 023191 131 AL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A-SA 205 (286)
Q Consensus 131 a~---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~-~n 205 (286)
++ +++||+|++.+.+|++...++.... ...|.+++.++.+ .++.+|++++++.+++ +|++|.++ . +.
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~----~~~g~~v~~i~~~---~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 80 SLLNPLKPGDEVLVTSNEHPSNRYPWEEIA----KRKGAEVRVIPAD---PGGSLDLEDLEEALNP-DTRLVSISHVENS 151 (371)
T ss_dssp HHHHHGTTTCEEEEEESSHHHHHHHHHHHH----HHTTEEEEEEEEG---TTSSCSHHHHHHHHHT-TESEEEEESBETT
T ss_pred cccccccccccccccccccccccccccccc----ccchhhhcccccc---ccchhhhhhhhhhhcc-ccceEEeeccccc
Confidence 88 8999999999999988865544222 2446666667643 4578999999999987 99999997 3 34
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+|...|+++|.++||++++++++|++|++|..+.++.... +|++++|+|| |+||+| |++++++++.+-.+
T Consensus 152 tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~---~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~ 222 (371)
T PF00266_consen 152 TGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELG---ADFLVFSSHK-LGGPPGLGFLYVRPEAIERLR 222 (371)
T ss_dssp TTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTT---ESEEEEESTS-TTSSSTEEEEEEEHHHHHHHH
T ss_pred ccEEeeeceehhhhhccCCceeEechhccccccccccccc---cceeeecccc-cCCCCchhhheehhhhhhccc
Confidence 8899999999999999999999999999999998887776 9999999999 999999 99999998765553
No 18
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.92 E-value=2.4e-24 Score=197.17 Aligned_cols=213 Identities=18% Similarity=0.218 Sum_probs=159.9
Q ss_pred CceecC-CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC-CCCCcceeEEeCCChH-H
Q 023191 48 GLELIP-SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~-~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~v~~~sG~~-a 124 (286)
.+.|+. +..++|+.+.+++.+++.+.+ +++....+.......+..+.+|+.+++++|+ +++ +|++++|++ +
T Consensus 20 ~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~----~i~~~~~~t~~ 93 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK----NIVWTRGTTES 93 (401)
T ss_pred eEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC----EEEEECCHHHH
Confidence 456654 344789999999998886533 2222111111233455666788999999999 553 599999999 7
Q ss_pred HHHHHHHh----cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 125 NFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 125 ~~~~l~a~----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+.+++.++ +++||+|++++++|++.+.++.. .+...|.+++.++. + +++.+|++++++.+++ +|++|+
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~----~~~~~g~~v~~v~~--~-~~~~~d~~~l~~~i~~-~t~lv~ 165 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLM----VAQQTGAKVVKLPL--G-ADRLPDVDLLPELITP-RTRILA 165 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHH----HHHHhCCEEEEEec--C-CCCcCCHHHHHHhcCc-CcEEEE
Confidence 76677777 47999999999888875443321 22345666666664 3 4578999999999987 999999
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhh
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (286)
++ ++| +|...|+++|.++|+++|+++++|++|+.|.++.++.... +|++++|+|| +.||.| |++++++++.+.
T Consensus 166 i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~---~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~ 241 (401)
T PRK10874 166 LGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALD---IDFYAFSGHK-LYGPTGIGVLYGKSELLEA 241 (401)
T ss_pred EeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcC---CCEEEEeccc-ccCCCccEEEEEchHHHhc
Confidence 98 666 8889999999999999999999999999888776554443 9999999999 558988 999999876554
Q ss_pred h
Q 023191 278 N 278 (286)
Q Consensus 278 ~ 278 (286)
.
T Consensus 242 ~ 242 (401)
T PRK10874 242 M 242 (401)
T ss_pred C
Confidence 3
No 19
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=3.5e-24 Score=194.34 Aligned_cols=202 Identities=18% Similarity=0.258 Sum_probs=150.9
Q ss_pred CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCC
Q 023191 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP 135 (286)
Q Consensus 57 ~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~ 135 (286)
++|+.+++++.+.+.+.. +.++...|..........+.+++.+++++|++..+ +|++++|++ ++..++.+++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~~ 85 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREVEETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLKE 85 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccCC
Confidence 468899999988776521 11111111111122344556778999999986532 599998888 777788889999
Q ss_pred CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHH
Q 023191 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYE 213 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~ 213 (286)
||+|+++.++|+++..+... .+...|.+++.++ .+ .++.+|++++++.+++ +|++|+++ ++| +|...|++
T Consensus 86 gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~~ 157 (376)
T TIGR01977 86 GDHVITTPMEHNSVARPLEC----LKEQIGVEITIVK--CD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPIE 157 (376)
T ss_pred CCEEEECcchhhHHHHHHHH----HHHHcCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCHH
Confidence 99999999888776543221 1223355555554 44 4578999999999987 89999997 666 78999999
Q ss_pred HHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 214 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 214 ~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
+|.++|+++|+++|+|++|++|..+.++.... +|++++|+|||++||.| |+++++++.
T Consensus 158 ~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~---~D~~~~s~~K~l~~p~g~g~l~~~~~~ 216 (376)
T TIGR01977 158 EIGELAQENGIFFILDAAQTAGVIPIDMTELA---IDMLAFTGHKGLLGPQGTGGLYIREGI 216 (376)
T ss_pred HHHHHHHHcCCEEEEEhhhccCccCCCchhcC---CCEEEecccccccCCCCceEEEEcCCc
Confidence 99999999999999999999998877765554 99999999999999999 988888764
No 20
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.92 E-value=2.7e-24 Score=197.18 Aligned_cols=212 Identities=16% Similarity=0.154 Sum_probs=158.4
Q ss_pred CceecC-CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC-CCCCcceeEEeCCChH-H
Q 023191 48 GLELIP-SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~-~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~v~~~sG~~-a 124 (286)
.+-|+. +..++|+.+++++.+++...+ +++....+.......+..+.+|+.+++++|. +++ +|++|+|++ +
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~----~v~~t~g~t~~ 97 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKQAALFINARSAE----ELVFVRGTTEG 97 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCC----eEEEeCCHHHH
Confidence 356653 444789999999988876433 1211111111122345555688999999998 443 599999999 6
Q ss_pred HHHHHHH----hcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 125 NFQVYTA----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 125 ~~~~l~a----~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+..++.+ ++++||+|++++++|++...++... +...|.+++.++ .+ .++.+|++++++++++ +|++|+
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~ 169 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQML----CARVGAELRVIP--LN-PDGTLQLETLPALFDE-RTRLLA 169 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHH----HHHcCcEEEEEe--cC-CCCCCCHHHHHHhcCC-CcEEEE
Confidence 6656665 4689999999999988775554322 234566666665 34 4578999999999987 899999
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhh
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (286)
++ ++| +|...|+++|.++|+++|+++++|++|+.|..+.++.... +|++++|+|| +.||.| |++++++++.+.
T Consensus 170 l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~---~D~~~~s~~K-~~gp~G~G~l~~~~~~~~~ 245 (406)
T PRK09295 170 ITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALD---CDFYVFSGHK-LYGPTGIGILYVKEALLQE 245 (406)
T ss_pred EecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcC---CCEEEeehhh-ccCCCCcEEEEEchHhHhh
Confidence 98 666 8899999999999999999999999999998876665444 9999999999 668999 999999876543
No 21
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.92 E-value=7.5e-24 Score=190.83 Aligned_cols=204 Identities=16% Similarity=0.087 Sum_probs=154.5
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
++|++|+.+.|+.+.+++.+.+... .+ ....++.+.+++.+++++|++.+. .+++++|++ ++..
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~~---~~---------~~~~~~~~~~~~~la~~~g~~~~~---~~~~~~~~t~al~~ 65 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLGH---RS---------PEFLALMDEILEGLRYVFQTENGL---TFLLSGSGTGAMEA 65 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccCC---CC---------HHHHHHHHHHHHHHHHHhcCCCCC---EEEEecCcHHHHHH
Confidence 4788999999999999997654321 01 234456667889999999995543 366666655 8777
Q ss_pred HHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 023191 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (286)
Q Consensus 128 ~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n- 205 (286)
++.+++++||+|+++++.|.+.. +...+...|.+++.++ .+ +++.+|++++++.+++++|++|+++ ++|
T Consensus 66 ~~~~~~~~g~~vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~ 136 (356)
T cd06451 66 ALSNLLEPGDKVLVGVNGVFGDR------WADMAERYGADVDVVE--KP-WGEAVSPEEIAEALEQHDIKAVTLTHNETS 136 (356)
T ss_pred HHHHhCCCCCEEEEecCCchhHH------HHHHHHHhCCCeEEee--cC-CCCCCCHHHHHHHHhccCCCEEEEeccCCC
Confidence 88899999999999886554421 1113345566666665 44 3578999999999976589999997 555
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+|...|+++|.++|+++|+++++|++|++|..+.+.... ++|++++|+||||++|.| |+++.++++.+..+
T Consensus 137 ~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~ 208 (356)
T cd06451 137 TGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEW---GVDVAYTGSQKALGAPPGLGPIAFSERALERIK 208 (356)
T ss_pred cccccCHHHHHHHHHhcCCEEEEeeehhccCcccccccc---CccEEEecCchhccCCCCcceeEECHHHHHHHH
Confidence 778899999999999999999999999988765444333 489999999999999988 99999988765544
No 22
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.92 E-value=4.7e-24 Score=195.05 Aligned_cols=213 Identities=18% Similarity=0.166 Sum_probs=157.5
Q ss_pred CceecC-CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC-CCCcceeEEeCCChH-H
Q 023191 48 GLELIP-SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~-~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~v~~~sG~~-a 124 (286)
.+-|+. +..++|+.+++++.+++...+ +++....+.......+..+.+|+.+++++|++ ++ +|++|+|++ +
T Consensus 17 ~iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~----~i~~t~g~t~~ 90 (398)
T TIGR03392 17 TVYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE----NIVWTRGTTES 90 (398)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCChHHH
Confidence 456654 344789999999988875422 22221111122233455667889999999995 43 599999999 7
Q ss_pred HHHHHHHh----cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 125 NFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 125 ~~~~l~a~----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+..++.++ +++||+|++++++|++...++.. .+...|.+++.+++ + .++.+|++++++++++ +|++|+
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~----~~~~~g~~v~~v~~--~-~~~~~~~~~l~~~i~~-~t~lv~ 162 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLM----VAQQTGAKVVKLPI--G-ADLLPDIRQLPELLTP-RTRILA 162 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHH----HHHHcCcEEEEEec--C-CCCCcCHHHHHHHhcc-CceEEE
Confidence 77677777 58999999999888875433321 22345666666653 4 4577899999999987 899999
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhh
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (286)
++ ++| +|...|+++|.++|+++|+++++|++|+.|....++.... +|++++|+|| +.||.| |++++++++.+.
T Consensus 163 i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~---~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~ 238 (398)
T TIGR03392 163 LGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALD---IDFYAFSGHK-LYGPTGIGVLYGKTELLEA 238 (398)
T ss_pred EECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcC---CCEEEEeccc-ccCCCceEEEEEcHHHHhh
Confidence 87 666 8889999999999999999999999998887765554333 8999999999 557888 999999876543
Q ss_pred h
Q 023191 278 N 278 (286)
Q Consensus 278 ~ 278 (286)
.
T Consensus 239 ~ 239 (398)
T TIGR03392 239 M 239 (398)
T ss_pred C
Confidence 3
No 23
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.91 E-value=1.7e-23 Score=191.41 Aligned_cols=204 Identities=15% Similarity=0.134 Sum_probs=158.2
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
+.+++|....++.|++++...+.. + . .....++.+.+++++++++|++.++ .++++++++ ++..
T Consensus 11 ~l~~pGP~~~~~~V~~a~~~~~~~-~----------~-~~~~~~~~~~~~~~l~~~~g~~~~~---~vi~~~~gt~a~~~ 75 (401)
T PLN02409 11 HLFVPGPVNIPERVLRAMNRPNED-H----------R-SPAFPALTKELLEDVKYIFKTKSGT---PFIFPTTGTGAWES 75 (401)
T ss_pred eeccCCCCCCCHHHHHHhcCCCCC-C----------C-CHHHHHHHHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHH
Confidence 456778778899999999765432 1 0 2456778889999999999997643 466666666 7777
Q ss_pred HHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc-C
Q 023191 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG-A 203 (286)
Q Consensus 128 ~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~-~ 203 (286)
++..+++|||+|+++++.|.+.. + ...++..|.+++.++. + .+..+|++++++.+++ +++|+|+++ +
T Consensus 76 a~~~~~~~Gd~Vlv~~~~~~~~~--~----~~~~~~~g~~v~~v~~--~-~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~ 146 (401)
T PLN02409 76 ALTNTLSPGDKVVSFRIGQFSLL--W----IDQMQRLNFDVDVVES--P-WGQGADLDILKSKLRQDTNHKIKAVCVVHN 146 (401)
T ss_pred HHHhcCCCCCEEEEeCCCchhHH--H----HHHHHHcCCceEEEEC--C-CCCCCCHHHHHHHHhhCcCCCccEEEEEee
Confidence 88888999999999996554431 1 1123455666766663 3 2345899999999985 378999987 5
Q ss_pred CC-CCCccCHHHHHHH--HHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 204 SA-YARLYDYERIRKV--CNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 204 ~n-~g~~~~l~~I~~i--a~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+| +|...|+++|.++ |+++|+++++|++|++|..+.+...++ +|++++|+||||++|.| |++++++++.+..+
T Consensus 147 ~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~---~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~ 223 (401)
T PLN02409 147 ETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWG---VDVALTGSQKALSLPTGLGIVCASPKALEASK 223 (401)
T ss_pred cccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccC---ccEEEEcCccccCcCCCcceeEECHHHHHHHh
Confidence 55 8899999999999 999999999999999998877766665 99999999999999999 99999988765544
No 24
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=1.3e-23 Score=191.46 Aligned_cols=211 Identities=15% Similarity=0.100 Sum_probs=155.2
Q ss_pred cCceecCCC--CCCCHHHHHHhccccccCCCCCCCCC-cccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 47 KGLELIPSE--NFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e--~~~~~~v~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
+.|||.+-+ .++++.+++++.++... + +.++. .+..+ .......+.+++.+++++|++. +.+++|++
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~-~--~~~~~~~~~~~-~~~~~~~~~l~~~lA~~~g~~~------~~~~~g~t 88 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGDG-Y--SVCDYCPGRLD-QIKKPPIADFHEDLAEFLGMDE------ARVTHGAR 88 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHhc-c--CCCcccccccc-cccChHHHHHHHHHHHHhCCCc------EEEeCCHH
Confidence 457876543 37899999999987743 2 12111 00111 1112234456688999999864 66788888
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc------CC
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RP 196 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~------~t 196 (286)
++.+++.+++++||+|++..+.|.+... .+...|.+++.++...+ +++.+|++++++.+++. ++
T Consensus 89 ~a~~~al~~l~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~ 159 (387)
T PRK09331 89 EGKFAVMHSLCKKGDYVVLDGLAHYTSYV--------AAERAGLNVREVPKTGY-PEYKITPEAYAEKIEEVKEETGKPP 159 (387)
T ss_pred HHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCCEEEEEeCccC-cCCCcCHHHHHHHHHHhhhccCCCC
Confidence 8888999999999999999877666542 23456766666654213 46789999999998752 68
Q ss_pred cEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 197 KLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 197 k~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
++|+++ +++ +|...|+++|+++|+++|+++++|++|+.|..+.+.... ++|++++|+|||+++|.+ |+++++++
T Consensus 160 ~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~---g~D~~~~s~~K~l~~~~~~G~l~~~~~ 236 (387)
T PRK09331 160 ALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKL---GADFIVGSGHKSMAASAPSGVLATTEE 236 (387)
T ss_pred EEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEECHH
Confidence 999987 555 789999999999999999999999999998766554433 389999999999988877 99999988
Q ss_pred hhhhhc
Q 023191 274 VKEINK 279 (286)
Q Consensus 274 ~~~~~~ 279 (286)
+.+...
T Consensus 237 ~i~~~~ 242 (387)
T PRK09331 237 YADKVF 242 (387)
T ss_pred HHhhcc
Confidence 666543
No 25
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.91 E-value=8.6e-24 Score=190.33 Aligned_cols=202 Identities=20% Similarity=0.268 Sum_probs=152.6
Q ss_pred CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh
Q 023191 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~ 132 (286)
+..++|+.+++++.+.+...+ +.++.+.+.......++.+.+++.+++++|++++ +|++++|++ ++..++.++
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~~l 79 (353)
T TIGR03235 6 ATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVERARKQVAEALGADTE----EVIFTSGATESNNLAILGL 79 (353)
T ss_pred CCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHHH
Confidence 445789999999988875433 2333211111112334556788999999999875 499999988 777677777
Q ss_pred c----CCC-CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 023191 133 L----KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (286)
Q Consensus 133 ~----~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n- 205 (286)
. ++| +.|++...+|+++..++.. ....|.+++.++ .+ +++.+|++++++.+++ ++++|+++ ++|
T Consensus 80 ~~~~~~~g~~~vi~~~~~~~s~~~~~~~-----~~~~G~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (353)
T TIGR03235 80 ARAGEQKGKKHIITSAIEHPAVLEPIRA-----LERNGFTVTYLP--VD-ESGRIDVDELADAIRP-DTLLVSIMHVNNE 150 (353)
T ss_pred HHhcccCCCCeeeEcccccHHHHHHHHH-----HHhcCCEEEEEc--cC-CCCcCCHHHHHHhCCC-CCEEEEEEcccCC
Confidence 5 356 7899988888887655432 123455565555 44 4578999999999987 89999887 555
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
+|...|+++|.++|+++|+++++|++|+.|.+..++..+. +|++++|+||| +||.| |+++++++.
T Consensus 151 tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~---~D~~~~s~~K~-~gp~g~g~l~~~~~~ 216 (353)
T TIGR03235 151 TGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADR---IDLISCSGHKI-YGPKGIGALVIRKRG 216 (353)
T ss_pred ceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccC---CCEEEeehhhc-CCCCceEEEEEccCc
Confidence 7889999999999999999999999999999887766554 99999999997 58988 999999874
No 26
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.91 E-value=2.3e-23 Score=192.10 Aligned_cols=212 Identities=16% Similarity=0.139 Sum_probs=154.7
Q ss_pred CceecCCC-CCCCHHHHHHhccccccCCCCCCCCC-cccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 48 GLELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~~e-~~~~~~v~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
.+.|+.+. .++|+.+++++.+.+...+ +.+.. .++.. ....+..+.+|+.+++++|++.++ +|++|+|++ +
T Consensus 33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~r~~la~~~~~~~~~---~v~~t~g~t~a 106 (424)
T PLN02855 33 LVYLDNAATSQKPAAVLDALQDYYEEYN--SNVHRGIHALS-AKATDAYELARKKVAAFINASTSR---EIVFTRNATEA 106 (424)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCccchHH-HHHHHHHHHHHHHHHHHcCCCCCC---EEEEeCCHHHH
Confidence 35565443 3678999999988775422 11111 11111 122234456789999999995322 599999999 6
Q ss_pred HHHHHHH----hcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 125 NFQVYTA----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 125 ~~~~l~a----~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+..++.+ .+++||+|++++++|++.+.++.. .+...|.+++.++ ++ .++.+|++++++.+++ +|++|+
T Consensus 107 l~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~----~a~~~g~~v~~v~--~~-~~~~~~~~~l~~~i~~-~t~lv~ 178 (424)
T PLN02855 107 INLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQL----VAQKTGAVLKFVG--LT-PDEVLDVEQLKELLSE-KTKLVA 178 (424)
T ss_pred HHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHH----HHHHcCCEEEEEe--cC-CCCCcCHHHHHHHhcc-CceEEE
Confidence 6656665 468999999999998876544321 1234565566665 33 3456999999999987 999999
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhh
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (286)
++ ++| +|...|+++|.++|+++|+++++|++|+.|..+.++.... +|++++|+|| ++||.| |++++++++.+.
T Consensus 179 i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~---~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~ 254 (424)
T PLN02855 179 THHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLG---ADFLVASSHK-MCGPTGIGFLWGKSDLLES 254 (424)
T ss_pred EeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcC---CCEEEeeccc-ccCCCccEEEEEchhhhhc
Confidence 97 666 8899999999999999999999999999887766655444 8999999999 678988 999999876543
No 27
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=2.1e-23 Score=189.61 Aligned_cols=202 Identities=18% Similarity=0.312 Sum_probs=153.5
Q ss_pred CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHH
Q 023191 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (286)
Q Consensus 53 ~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a 131 (286)
++..++|+.+++++.+++...+ ++++.. +.......++.+++++++++++|++++ +|++++|++ ++.+++.+
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~r~~la~~~g~~~~----~i~~t~~~t~a~~~al~~ 78 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEYF--GNPSSM-HSFGGEVGKAVEEAREQVAKLLGAEPD----EIIFTSGGTESDNTAIKS 78 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--CCCCcc-cHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 3455789999999998876532 443321 111122345566788999999999864 499999888 77667766
Q ss_pred hc---CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C
Q 023191 132 LL---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 206 (286)
Q Consensus 132 ~~---~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~ 206 (286)
++ .+||+|++...+|+++..++.. ....|.+++.++ .+ +++.+|++++++.+++ ++++++++ ++| +
T Consensus 79 ~~~~~~~~~~vv~~~~~~~s~~~~~~~-----~~~~G~~v~~v~--~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~t 149 (379)
T TIGR03402 79 ALAAQPEKRHIITTAVEHPAVLSLCQH-----LEKQGYKVTYLP--VD-EEGRLDLEELRAAITD-DTALVSVMWANNET 149 (379)
T ss_pred HHHhcCCCCeEEEcccccHHHHHHHHH-----HHHcCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCe
Confidence 53 5678999999888877554431 122465566665 34 4578999999999987 89999887 666 7
Q ss_pred CCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
|...|+++|.++|+++|+++++|++|+.|..+.++.... +|++++|+|| ++||.| |+++++++.
T Consensus 150 G~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~---~D~~~~s~~K-~~gp~G~g~l~v~~~~ 214 (379)
T TIGR03402 150 GTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMN---IDMLSLSGHK-LHGPKGVGALYIRKGT 214 (379)
T ss_pred eecccHHHHHHHHHHcCCEEEEECcccccccccCcccCC---CCEEEEcHHH-cCCCCceEEEEECCCC
Confidence 799999999999999999999999999998877766555 9999999999 779999 999998764
No 28
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=2.5e-23 Score=190.15 Aligned_cols=213 Identities=20% Similarity=0.240 Sum_probs=156.6
Q ss_pred ceec-CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHH
Q 023191 49 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (286)
Q Consensus 49 i~L~-~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (286)
+.|+ ++..++|+.+++++.+.+.... ..++. .|....+..++.+.+++.+++++|++.+ +|++++|++ ++.
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~ia~~~~~~~~----~v~~~~~~t~~l~ 91 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSN--ANRGG-AYESSRRADQVVDDAREAVADLLNADPP----EVVFGANATSLTF 91 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcC--CCCCC-CchHHHHHHHHHHHHHHHHHHHcCCCCC----eEEEeCCHHHHHH
Confidence 5554 4455789999999998875421 11111 1222344556677888999999998764 499999988 655
Q ss_pred HHHHHh---cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 127 QVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 127 ~~l~a~---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
.++.++ ++|||+|++++++|.++..++.. .+...|.+++.++ .+.+++.+|++++++.+++ +|++|+++
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~----~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~i~~-~~~lv~i~~ 164 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQ----AAERAGAKVKWAR--VDEATGELHPDDLASLLSP-RTRLVAVTA 164 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHH----HHHhcCCEEEEEe--ccccCCCcCHHHHHHhcCC-CceEEEEeC
Confidence 455554 68999999999888776543311 2334566666665 4433578999999999987 89999997
Q ss_pred CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 203 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
++| +|...|+++|.++|++||+++++|++|+.|....++.... +|++++|+|||+ ||+.|++++++++.+..+
T Consensus 165 ~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~---~d~~~~s~~K~~-g~~~G~l~~~~~~~~~l~ 238 (397)
T TIGR01976 165 ASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATG---ADFLTCSAYKFF-GPHMGILWGRPELLMNLP 238 (397)
T ss_pred CCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcC---CCEEEEechhhc-CCceEEEEEcHHHHhhCC
Confidence 666 8888999999999999999999999998776554444333 899999999987 677899999987665443
No 29
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.91 E-value=4.3e-23 Score=188.98 Aligned_cols=213 Identities=19% Similarity=0.194 Sum_probs=155.4
Q ss_pred CceecCC-CCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 48 GLELIPS-ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 48 ~i~L~~~-e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
.+-|+.+ .+++|+.+.+++.+.+...+ +.+....+.......+..+.+++.+++++|++..+ +|++++|++ ++
T Consensus 19 ~~yld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~---~v~~~~g~t~~l 93 (403)
T TIGR01979 19 LVYLDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYEAVREKVAKFINAASDE---EIVFTRGTTESI 93 (403)
T ss_pred eEEEeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCC---eEEEeCCHHHHH
Confidence 3556544 44788999999988776533 22211001111122334456778999999997322 599999999 66
Q ss_pred HHHHHHh----cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 126 FQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 126 ~~~l~a~----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
.+++.++ +++||+|++++++|++...++.. .+...|.+++.++ .+ +++.+|++++++.+++ +|++|++
T Consensus 94 ~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~----~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~i~~-~~~lv~~ 165 (403)
T TIGR01979 94 NLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQL----LAERTGATLKFIP--LD-DDGTLDLDDLEKLLTE-KTKLVAI 165 (403)
T ss_pred HHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHH----HHHhcCcEEEEEe--cC-CCCCCCHHHHHHHhcc-CCeEEEE
Confidence 5566664 68999999999988876543321 2234566666665 44 5678999999999987 8999998
Q ss_pred c-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhh
Q 023191 202 G-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (286)
Q Consensus 202 ~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (286)
+ ++| +|...|+++|.++|+++|+++++|++|+.|..+.++.... +|++++|+||++ ||.| |++++++++.+.
T Consensus 166 ~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~---~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~ 240 (403)
T TIGR01979 166 THVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALD---CDFYVFSGHKMY-GPTGIGVLYGKEELLEQ 240 (403)
T ss_pred EcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccC---CCEEEEeccccc-CCCCceEEEEchHHHhc
Confidence 7 666 7899999999999999999999999999987766554444 999999999965 7888 999998876543
No 30
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.90 E-value=2.8e-23 Score=190.22 Aligned_cols=207 Identities=19% Similarity=0.251 Sum_probs=152.3
Q ss_pred ceecC-CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHH
Q 023191 49 LELIP-SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (286)
Q Consensus 49 i~L~~-~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (286)
+-|+. +..++++.+++++.+++...+ +.+....+.......+..+.+++.+++++|++++ +|++++|++ ++.
T Consensus 5 ~yld~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~ 78 (402)
T TIGR02006 5 IYLDYAATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEAEEAVENARNQVAELIGADSR----EIVFTSGATESNN 78 (402)
T ss_pred EEeeCCcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHH
Confidence 34443 344789999999988775433 2222111111111234556678999999999774 499999998 766
Q ss_pred HHHHHh----cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 127 QVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 127 ~~l~a~----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
.++.++ .++||+|+++.++|+++..++.. +...|.+++.++ .+ +++.+|++++++.+++ ++++|+++
T Consensus 79 ~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~-----~~~~g~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~v~ 149 (402)
T TIGR02006 79 LAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRY-----LEREGFEVTYLP--PK-SNGLIDLEELKAAIRD-DTILVSIM 149 (402)
T ss_pred HHHHHHHHhhcCCCCEEEECCCccHHHHHHHHH-----HHhcCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CCEEEEEE
Confidence 566555 37899999999888887654431 122355565565 44 5678999999999987 89999887
Q ss_pred -CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 203 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
++| +|...|+++|.++|+++|+++++|++|+.|..+.++.... +|++++|+||+ .||.| |+++++++.
T Consensus 150 ~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~---~D~~~~s~~K~-~gp~G~G~l~~~~~~ 220 (402)
T TIGR02006 150 HVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELK---VDLMSISGHKI-YGPKGIGALYVRRKP 220 (402)
T ss_pred CCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccC---CCEEEEehhhh-cCCCceEEEEEccCC
Confidence 555 7888999999999999999999999999998876665444 99999999995 57988 999998753
No 31
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.90 E-value=4.4e-23 Score=186.99 Aligned_cols=211 Identities=15% Similarity=0.130 Sum_probs=156.3
Q ss_pred CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHH
Q 023191 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (286)
Q Consensus 53 ~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a 131 (286)
.+.+++|+.+++++.+.+...+ .++....+.......+...++++.+++++|++.. .+|++++|++ ++..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAYEAAREKVARFINAPSP---DEIIFTRNTTEAINLVAYG 80 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCCHHHHHHHHHHH
Confidence 4566789999999988875533 2322211122233445566688999999998722 2588999988 77768888
Q ss_pred hcC---CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-C
Q 023191 132 LLK---PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-Y 206 (286)
Q Consensus 132 ~~~---~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~ 206 (286)
+.. +||+|++++++|++...+... .+...|.+++.++ .+ +++.+|++++++.+.+ ++++|+++ ++| +
T Consensus 81 l~~~~~~g~~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~t 152 (373)
T cd06453 81 LGRANKPGDEIVTSVMEHHSNIVPWQQ----LAERTGAKLKVVP--VD-DDGQLDLEALEKLLTE-RTKLVAVTHVSNVL 152 (373)
T ss_pred hhhcCCCCCEEEECcchhHHHHHHHHH----HHhhcCcEEEEee--cC-CCCCcCHHHHHHHhcC-CceEEEEeCccccc
Confidence 877 999999999888775433221 1224566666665 34 5678999999999987 89999987 666 7
Q ss_pred CCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 207 g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
|...|+++|.++|++||+++++|++|+.|....+.... ++|++++|+|||+++++.|++++++++.+..+
T Consensus 153 G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~ 222 (373)
T cd06453 153 GTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDL---GCDFLAFSGHKMLGPTGIGVLYGKEELLEEMP 222 (373)
T ss_pred CCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeecccc---CCCEEEeccccccCCCCcEEEEEchHHhhcCC
Confidence 88899999999999999999999999888765544433 38999999999998744499999987665443
No 32
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=8.7e-23 Score=187.07 Aligned_cols=202 Identities=19% Similarity=0.260 Sum_probs=148.4
Q ss_pred CCCCCCHHHHHHhccccc--cCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHH
Q 023191 54 SENFTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYT 130 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~ 130 (286)
+..++|+.+++++.+++. +.+ +.+............+..+.+++.+++++|++++ +|++++|++ ++..++.
T Consensus 11 ~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~----~v~~~~g~t~al~~~l~ 84 (404)
T PRK14012 11 ATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLIGADPR----EIVFTSGATESDNLAIK 84 (404)
T ss_pred CCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC----eEEEeCCHHHHHHHHHH
Confidence 444789999999988775 333 2222110110011124455677999999999875 488888888 6665666
Q ss_pred Hh----cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 023191 131 AL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 205 (286)
Q Consensus 131 a~----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n 205 (286)
++ .++||+|++++.+|+++..++... ...|.+++.++ .+ +++.+|+++|++++++ ++++|+++ .+|
T Consensus 85 ~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-----~~~g~~~~~v~--~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~n 155 (404)
T PRK14012 85 GAAHFYQKKGKHIITSKTEHKAVLDTCRQL-----EREGFEVTYLD--PQ-SNGIIDLEKLEAAMRD-DTILVSIMHVNN 155 (404)
T ss_pred HHHHhhcCCCCEEEEecCccHHHHHHHHHH-----HhCCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CCEEEEEECcCC
Confidence 55 489999999998888876544321 12355555554 44 5678999999999987 89999887 555
Q ss_pred -CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 206 -~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
+|...|+++|.++|+++|+++|+|++|++|..+.+..... +|++++|+|| +.||.| |+++++++.
T Consensus 156 ~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~---~D~~~~s~~K-~~gp~g~G~l~~~~~~ 222 (404)
T PRK14012 156 EIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLK---VDLMSFSAHK-IYGPKGIGALYVRRKP 222 (404)
T ss_pred CccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCC---CCEEEEehhh-ccCCCceEEEEEecCC
Confidence 7889999999999999999999999999998866554443 9999999999 557888 999988764
No 33
>PLN00175 aminotransferase family protein; Provisional
Probab=99.90 E-value=2e-22 Score=184.95 Aligned_cols=235 Identities=14% Similarity=0.105 Sum_probs=170.1
Q ss_pred cccccccChHHHHHHHHHHHHHHcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 101 (286)
++++..++++.+..+.+.. ...+.++|..|++ ++++.+++++.+.+.+.. ..|+...+..+|++++.+++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~Lr~aia~~~ 104 (413)
T PLN00175 33 AKRLEKFKTTIFTQMSSLA-IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-------NQYARGFGVPELNSAIAERF 104 (413)
T ss_pred hHHhhcCCCCHHHHHHHHh-hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-------CCcCCCCCCHHHHHHHHHHH
Confidence 4556667777777776653 3347899998877 357888888888775411 22455678889999999999
Q ss_pred HHHCCCCCCCcce-eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCC
Q 023191 102 LEAFRLDPEKWGV-NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (286)
Q Consensus 102 ~~~~g~~~~~~~~-~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (286)
.+.+|.+.+. . +|++|+|++ ++.+++.++++|||+|++++ |.|..+...+...|.+++.++ ++.++
T Consensus 105 ~~~~g~~~~~--~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~--------P~y~~~~~~~~~~g~~~~~v~--~~~~~ 172 (413)
T PLN00175 105 KKDTGLVVDP--EKEVTVTSGCTEAIAATILGLINPGDEVILFA--------PFYDSYEATLSMAGAKIKTVT--LRPPD 172 (413)
T ss_pred HHHhCCCCCC--CCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeC--------CCchhHHHHHHHcCCEEEEEE--CCccc
Confidence 9988864322 2 599999999 88778889999999999999 555444445567777666665 44345
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCC-CCCC---cce
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFE---YAD 250 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~~---~~D 250 (286)
+.+|+++|++.+.+ ++|+|+++ |+| +|... ++++|+++|++|+++||+|+++........... ..+. ...
T Consensus 173 ~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~v 251 (413)
T PLN00175 173 FAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERT 251 (413)
T ss_pred CCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcE
Confidence 88999999999987 89999997 666 67555 477899999999999999999654332211100 0111 245
Q ss_pred EEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 251 VVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 251 ~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
+++.|++|.|+ |.+.|++++++++.+...
T Consensus 252 i~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~ 282 (413)
T PLN00175 252 VTMNSLGKTFSLTGWKIGWAIAPPHLTWGVR 282 (413)
T ss_pred EEEecchhhccCcchheeeeEeCHHHHHHHH
Confidence 78999999874 556699999988766554
No 34
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.8e-22 Score=183.49 Aligned_cols=231 Identities=15% Similarity=0.106 Sum_probs=163.8
Q ss_pred ccChHHHHHHHHHHHHHHcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC
Q 023191 29 VVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106 (286)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g 106 (286)
...+..+..+........+.++|..|++ ++++.+++++.+.+.+.. ..|+...+..++++++.+++.+.+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~la~~~~~~~~ 79 (382)
T PRK06108 7 ALPESGIREVANAGRGREGVLPLWFGESDLPTPDFIRDAAAAALADGE-------TFYTHNLGIPELREALARYVSRLHG 79 (382)
T ss_pred hCCchHHHHHHHHHhccCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3444555555554333346799999887 358899999888775421 1245556788999999999999888
Q ss_pred --CCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCC
Q 023191 107 --LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (286)
Q Consensus 107 --~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 183 (286)
++++ +|++|+|++ ++..++.+++++||.|++++|.|..+ ...+...|.+++.++++.+..++.+|
T Consensus 80 ~~~~~~----~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~--------~~~~~~~g~~~~~v~~~~~~~~~~~d 147 (382)
T PRK06108 80 VATPPE----RIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNL--------VAAPKILGARVVCVPLDFGGGGWTLD 147 (382)
T ss_pred CCcCcc----eEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccch--------HHHHHHCCCEEEEeeCCCCCCCccCC
Confidence 4553 599999999 88778889999999999999555443 33445667666666643322356899
Q ss_pred HHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccc-cCCCCC--CCC---cceEE
Q 023191 184 YDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPS--PFE---YADVV 252 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~--~~~---~~D~v 252 (286)
++++++.+++ ++++|+++ ++| +|... ++++|+++|+++++++|+|++|...... ....+. .+. ...++
T Consensus 148 ~~~l~~~~~~-~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~ 226 (382)
T PRK06108 148 LDRLLAAITP-RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIF 226 (382)
T ss_pred HHHHHHhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEE
Confidence 9999999876 89999887 666 67544 4778999999999999999997654332 111111 111 24578
Q ss_pred EeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 253 TTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 253 ~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
+.|++|+|+ |.+-|++++++++.+..+
T Consensus 227 ~~S~SK~~g~~G~RiG~~~~~~~~~~~~~ 255 (382)
T PRK06108 227 VNSFSKNWAMTGWRLGWLVAPPALGQVLE 255 (382)
T ss_pred EeechhhccCcccceeeeeCCHHHHHHHH
Confidence 999999874 444599999887765544
No 35
>PRK08960 hypothetical protein; Provisional
Probab=99.90 E-value=4.8e-22 Score=181.19 Aligned_cols=234 Identities=10% Similarity=0.015 Sum_probs=162.0
Q ss_pred cccccChHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 26 PLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
+++.+.++.+..+.....+. .+.++|..+++. +|+.+++++.+.+.+.. .+ |+...+..++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~------Y~~~~g~~~lr~~ia~ 80 (387)
T PRK08960 8 RSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TR------YTAARGLPALREAIAG 80 (387)
T ss_pred HHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-Cc------cCCCCCCHHHHHHHHH
Confidence 34445566666655543322 356899988874 68899999988776421 11 3445677899999999
Q ss_pred HHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCC
Q 023191 100 RALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (286)
Q Consensus 100 ~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (286)
++.+.+|.+.+. .+|++|+|++ ++..++.++++|||+|++++|.|+.+.. .+...|.+++.++++.+ .
T Consensus 81 ~~~~~~g~~~~~--~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~~v~~~~~-~ 149 (387)
T PRK08960 81 FYAQRYGVDVDP--ERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH--------FLRLVEGAAQLVPVGPD-S 149 (387)
T ss_pred HHHHHhCCCCCh--hhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCCeEEEEecCcc-c
Confidence 998877753322 3699999999 8877889999999999999966655533 33455666666664322 3
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--cceE
Q 023191 179 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADV 251 (286)
Q Consensus 179 ~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~ 251 (286)
++.+|++++++.+++ ++++++++ |+| +|...+ +++|+++|++||+++|+|+++.. ....+.....+. ...+
T Consensus 150 ~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~-~~~~~~~~~~~~~~~~vi 227 (387)
T PRK08960 150 RYQLTPALVERHWNA-DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHG-LTYGVDAASVLEVDDDAF 227 (387)
T ss_pred CCCCCHHHHHHHhCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCChhhccCCEE
Confidence 568999999999887 78888886 777 776665 55777789999999999999642 222111111111 1236
Q ss_pred EEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 252 VTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 252 v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
++.|++|.|+ |.+.|++++++++.+..+
T Consensus 228 ~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~ 257 (387)
T PRK08960 228 VLNSFSKYFGMTGWRLGWLVAPPAAVPELE 257 (387)
T ss_pred EEeecccccCCcccEEEEEEcCHHHHHHHH
Confidence 7899999874 445699999987665443
No 36
>PRK02948 cysteine desulfurase; Provisional
Probab=99.90 E-value=1.3e-22 Score=184.54 Aligned_cols=202 Identities=17% Similarity=0.249 Sum_probs=153.0
Q ss_pred CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHH
Q 023191 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (286)
Q Consensus 53 ~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a 131 (286)
++..++|+.+++++.+++...+ +.++..+ .......++.+.+++.+++++|++++ +|++++|++ ++..++.+
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLH-DIGGTASSLLQVCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCcccc-HHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 3445789999999988876533 2222111 11123345677788999999998764 599999988 77767777
Q ss_pred hc----CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-
Q 023191 132 LL----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA- 205 (286)
Q Consensus 132 ~~----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n- 205 (286)
++ ++||.|++...+|+++..... .++..|.+++.++ ++ +++.+|++++++.+++ ++++|+++ ++|
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~~-----~~~~~g~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYFQ-----SLESQGYTVTEIP--VD-KSGLIRLVDLERAITP-DTVLASIQHANSE 150 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHHH-----HHHhCCCEEEEEe--eC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence 75 679999999988887754432 2234565566665 44 4578999999999987 88999887 555
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
+|...|+++|.++|+++|+++++|++|.+|..+.+....+ +|+++.|+||++ ||.| |++++++++
T Consensus 151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~---~d~~~~s~~K~~-gp~G~G~l~~~~~~ 216 (381)
T PRK02948 151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMG---IDSLSVSAHKIY-GPKGVGAVYINPQV 216 (381)
T ss_pred cEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCC---CCEEEecHHhcC-CCCcEEEEEEcCCC
Confidence 7889999999999999999999999999987766655554 999999999965 7888 999998764
No 37
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.89 E-value=3.6e-22 Score=188.23 Aligned_cols=226 Identities=20% Similarity=0.155 Sum_probs=161.2
Q ss_pred ccccccccChHHHHHHHHHHHHH----HcCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHH
Q 023191 23 LNAPLEVVDPEIADIIEHEKARQ----WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (286)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (286)
+++++..+.+++...+.....+. .+.++|..|++ ++|+.+++++.+.+... .+ |+...+..+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~------Y~~~~G~~~l 190 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--EG------YSDSKGLFSA 190 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--CC------CCCCcChHHH
Confidence 46666777777776555544333 36799998766 24889999998776431 12 4556778899
Q ss_pred HHHHHHHHHHHCC--CCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEE
Q 023191 94 ESLCQKRALEAFR--LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 170 (286)
Q Consensus 94 ~~~~~~~~~~~~g--~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (286)
++++.+++.+..+ ++++ +|++|+|++ ++.+++.++++|||+|++++ |.|+.|...+...|..++.
T Consensus 191 Reaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~--------P~y~~y~~~~~~~g~~~v~ 258 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPS--------PDYPLWTACVNLAGGTAVH 258 (517)
T ss_pred HHHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcC--------CCCcCHHHHHHHCCCEEEE
Confidence 9999998877664 3553 699999999 87778899999999999999 5555555456677876655
Q ss_pred EecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCC-CCC
Q 023191 171 MPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS 244 (286)
Q Consensus 171 v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~ 244 (286)
++++.+ ++|.+|++++++.+++ +||+|+++ |+| +|...+ +++|+++|++|+++||+|+++. .....+. +..
T Consensus 259 ~~~~~~-~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~-~~~~~~~~~~s 335 (517)
T PRK13355 259 YRCDEQ-SEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYD-RLVMDGLEHTS 335 (517)
T ss_pred eecCcc-cCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hhcCCCCCccc
Confidence 553322 4589999999999987 89999887 766 776666 7889999999999999999964 2222221 111
Q ss_pred CCC-cce---EEEeCCCCCC--CCCCceEEEEe
Q 023191 245 PFE-YAD---VVTTTTHKSL--RGPRGAMIFFR 271 (286)
Q Consensus 245 ~~~-~~D---~v~~s~~K~l--~gp~gG~l~~~ 271 (286)
... ..| +++.|++|++ .|++-|++++.
T Consensus 336 ~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 336 IASLAPDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred HHHhCCCCeEEEEecchhhccCcccceEEEEee
Confidence 111 112 3368999985 67777999854
No 38
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.89 E-value=3e-22 Score=182.22 Aligned_cols=201 Identities=18% Similarity=0.315 Sum_probs=147.4
Q ss_pred CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC-CCCCcceeEEeCCChH-HHHHHHHH
Q 023191 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-SNFQVYTA 131 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~v~~~sG~~-a~~~~l~a 131 (286)
+..++++.|++++.+++.+.+ ++++..+..+......++++..+ +.+.++. +++ +|++|+|++ ++..++.+
T Consensus 7 a~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~~a~~~-~~~~~~~~~~~----~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 7 ATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIAEALDK-LYKGINARDLD----DIIITSCATESNNWVLKG 79 (382)
T ss_pred CCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHHHHHHH-HHHHcCcCCCC----eEEEeCCHHHHHHHHHHH
Confidence 344678899999998887644 23322111122344566655544 4456676 443 599999999 77667776
Q ss_pred hc-----CC-CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 023191 132 LL-----KP-HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (286)
Q Consensus 132 ~~-----~~-Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~ 204 (286)
+. ++ +++|+++..+|+++..+.. .+...|.+++.++ ++ +++.+|++++++.+++ +|++++++ ++
T Consensus 80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-----~~~~~G~~v~~v~--~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~ 150 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCA-----FLESLGVEVTYLP--IN-EQGTITAEQVREAITE-KTALVSVMWAN 150 (382)
T ss_pred HHHhhcccCCCCEEEEcCCccHHHHHHHH-----HHHHCCCEEEEEe--cC-CCCCCCHHHHHHhccc-CCeEEEEEccc
Confidence 52 55 5789999988888765433 1223565566665 44 4578999999999987 89999887 66
Q ss_pred C-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 205 n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
| +|...|+++|.++|+++|+++++|++|+.|..+.+..... +|++++|+||| .||.| |++++++++
T Consensus 151 n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~---~D~~~~s~~K~-~gp~G~g~l~vr~~~ 218 (382)
T TIGR03403 151 NETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAG---VDFLSFSAHKF-HGPKGVGGLYIRKGV 218 (382)
T ss_pred CCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccC---CCEEEEcchhh-CCCCceEEEEECCCC
Confidence 6 7899999999999999999999999999887766655444 99999999996 57998 999998765
No 39
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.89 E-value=1.7e-21 Score=177.39 Aligned_cols=216 Identities=16% Similarity=0.107 Sum_probs=152.9
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..+++. +++.+.+++.+.+..... ..|+...+..++++++++++++.+|.+.+. ..+|++|+|++
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-~~~vi~t~G~~ 101 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAENPEN------HRYPSYEGMLAYRQAVADWYKRRFGVELDP-ETEVLSLIGSK 101 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CCeEEECCCcH
Confidence 356889888774 578888888876643111 124445667889999999999887774321 01589999998
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
++..++++++++||.|++++ |.|+.+...+...|.+++.+|+ +. +++.+|++++++.+.+ ++|+|++
T Consensus 102 ~~l~~~~~~~~~~gd~vlv~~--------P~y~~~~~~~~~~G~~v~~v~~--~~~~g~~~d~~~l~~~~~~-~~~~v~i 170 (383)
T TIGR03540 102 EGIAHIPLAFVNPGDIVLVPD--------PGYPVYRIGTLFAGGEPYEMPL--KEENGFLPDFDAIPEDIAK-KAKLMFI 170 (383)
T ss_pred HHHHHHHHHhCCCCCEEEEeC--------CCCcchHHHHHhcCCEEEEEec--CcccCCccCHHHHHhhccc-cceEEEE
Confidence 87778899999999999999 4554444455667776666654 32 3567899999998877 8999999
Q ss_pred c-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCC---cceEEEeCCCCCCC--CCCceEEE
Q 023191 202 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE---YADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 202 ~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~---~~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
+ |+| +|...+ +++|+++|++|++++|+|+++..-......... .+. ...+++.|++|+|+ |.|-|+++
T Consensus 171 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i 250 (383)
T TIGR03540 171 NYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAV 250 (383)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEe
Confidence 8 777 776666 688899999999999999997532221101111 111 13477899999884 44459999
Q ss_pred Eecchhhhhc
Q 023191 270 FRKGVKEINK 279 (286)
Q Consensus 270 ~~~~~~~~~~ 279 (286)
.++++.+...
T Consensus 251 ~~~~l~~~~~ 260 (383)
T TIGR03540 251 GNADLIAGLG 260 (383)
T ss_pred CCHHHHHHHH
Confidence 9887765443
No 40
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.3e-21 Score=178.17 Aligned_cols=240 Identities=14% Similarity=0.096 Sum_probs=164.6
Q ss_pred hhccccccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHH
Q 023191 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (286)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (286)
+++++++.......++.+.+......+.++|..+++. +++.+.+++.+.+.... ..|+...+..+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia 76 (384)
T PRK06348 4 KFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-------TRYTDSGGDVELIEEII 76 (384)
T ss_pred hHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHH
Confidence 3455555666666666666654333467999888774 45667665544332211 12455567788999999
Q ss_pred HHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC
Q 023191 99 KRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (286)
Q Consensus 99 ~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (286)
+++.+.+|...+. .+|++|+|++ ++..++.++++|||+|++++ |.|..+...+...|..++.+++. +.
T Consensus 77 ~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~~~~~gd~vlv~~--------p~y~~~~~~~~~~g~~~~~~~~~-~~ 145 (384)
T PRK06348 77 KYYSKNYDLSFKR--NEIMATVGACHGMYLALQSILDPGDEVIIHE--------PYFTPYKDQIEMVGGKPIILETY-EE 145 (384)
T ss_pred HHHHHHhCCCCCh--hhEEEcCChHHHHHHHHHHhcCCCCEEEEeC--------CCCcchHHHHHHcCCEEEEecCC-cC
Confidence 9998877663332 3699999999 88779999999999999999 55544444555667655555432 22
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCC-CCCC---c
Q 023191 178 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFE---Y 248 (286)
Q Consensus 178 ~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~~---~ 248 (286)
+++.+|++++++.+++ ++++|+++ |+| +|...+ +++|.++|+++++++|+|+++..-........ ..+. .
T Consensus 146 ~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 224 (384)
T PRK06348 146 DGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPE 224 (384)
T ss_pred cCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcC
Confidence 4578999999998876 89999987 766 675554 77889999999999999999653222111111 0111 2
Q ss_pred ceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 249 ADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 249 ~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
..+++.|++|+++ |.|.|++++++++.+..+
T Consensus 225 ~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~ 257 (384)
T PRK06348 225 RTITFGSFSKDFAMTGWRIGYVIAPDYIIETAK 257 (384)
T ss_pred cEEEEecchhccCCccccceeeecCHHHHHHHH
Confidence 4577899999875 556699999887765544
No 41
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.89 E-value=5.6e-22 Score=179.12 Aligned_cols=206 Identities=16% Similarity=0.111 Sum_probs=145.3
Q ss_pred CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh
Q 023191 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~ 132 (286)
...+..+.+++++.++-.. + +.+...............+.+++.+++++|++ ++++++|++ ++.+++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~------~i~~~~g~t~al~~~l~~~ 79 (361)
T cd06452 9 RGGRLTPEARKALIEWGDG-Y--SVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMD------EARVTPGAREGKFAVMHSL 79 (361)
T ss_pred cCCCCCHHHHHHHHHHhcc-c--CCccccccccccccCchHHHHHHHHHHHcCCc------eEEEeCCHHHHHHHHHHHh
Confidence 4446788999999876632 2 12111000000011112233558888999983 388999999 888799999
Q ss_pred cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh------cCCcEEEEc-CCC
Q 023191 133 LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRPKLIVAG-ASA 205 (286)
Q Consensus 133 ~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~------~~tk~v~i~-~~n 205 (286)
+++||+|+++++.|.+... .+...|.+++.++.+.+ .++.+|++++++.+++ .++++|+++ ++|
T Consensus 80 ~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n 150 (361)
T cd06452 80 CEKGDWVVVDGLAHYTSYV--------AAERAGLNVREVPNTGH-PEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDG 150 (361)
T ss_pred cCCCCEEEEcCCcchHHHH--------HHHhcCCEEEEEecCCC-CCcccCHHHHHHHHHHHhhccCCCceEEEEECCCC
Confidence 9999999999866655432 23456766666654321 2368999999998863 268899997 555
Q ss_pred -CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhcc
Q 023191 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ 280 (286)
Q Consensus 206 -~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~ 280 (286)
+|...++++|.++|+++|+++|+|+||+.|..+...... ++|++++|+||++++|.+ |++++++++.+..++
T Consensus 151 ~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~ 224 (361)
T cd06452 151 NYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKEL---GADFIVGSGHKSMAASAPIGVLATTEEWADIVFR 224 (361)
T ss_pred CCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHc---CCCEEEecCCccccCCCCeEEEEECHHHHHHHhc
Confidence 778899999999999999999999999877654332222 389999999999977665 999999887766543
No 42
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.89 E-value=8.9e-22 Score=179.48 Aligned_cols=216 Identities=17% Similarity=0.188 Sum_probs=153.7
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC--CCCCcceeEEeCCC
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~~~~v~~~sG 121 (286)
.+.++|..++++ +++.+.+++.+.+..... ..|+...+..+|++++.+++.+.+|. ++++ +|++|+|
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~I~it~G 100 (388)
T PRK07366 30 KELIDLSLGSSDLPAPAHALEAIAQSLHDPST------HGYLLFHGTLDFREAAAQWYEQRFGLAVDPET---EVLPLIG 100 (388)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCccc------CCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcC---eEEECCC
Confidence 356999988883 588889998876643111 12444567788999999999888775 4431 4999999
Q ss_pred hH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 122 ~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
++ ++.+++.++++|||+|++++ |.|+.+...+...|.+++.++++. .+++.+|++++++.+.+ ++|+|+
T Consensus 101 s~~al~~~~~~l~~~gd~Vlv~~--------P~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~~~~-~~k~i~ 170 (388)
T PRK07366 101 SQEGTAHLPLAVLNPGDFALLLD--------PGYPSHAGGVYLAGGQIYPMPLRA-ENDFLPVFADIPTEVLA-QARLMV 170 (388)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcC--------CCCcchHHHHHhcCCEEEEEECCC-ccCCCCCHHHHHHhhcc-cceEEE
Confidence 99 88878899999999999999 555555545667787776666431 13568899999888776 899999
Q ss_pred Ec-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCC-CCCC--CC-c--ceEEEeCCCCCC--CCCCceE
Q 023191 201 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSP--FE-Y--ADVVTTTTHKSL--RGPRGAM 267 (286)
Q Consensus 201 i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~--~~-~--~D~v~~s~~K~l--~gp~gG~ 267 (286)
++ |+| +|...+ +++|+++|++|+++||+|+++.--...... .+.. +. . .-+++.|++|+| .|.|.|+
T Consensus 171 l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~ 250 (388)
T PRK07366 171 LSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGF 250 (388)
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhhee
Confidence 98 666 675554 667888999999999999995432211111 1111 11 1 236689999987 4556699
Q ss_pred EEEecchhhhhcc
Q 023191 268 IFFRKGVKEINKQ 280 (286)
Q Consensus 268 l~~~~~~~~~~~~ 280 (286)
++.++++.+..++
T Consensus 251 ~v~~~~li~~l~~ 263 (388)
T PRK07366 251 AIGNAQLIQALRQ 263 (388)
T ss_pred hcCCHHHHHHHHH
Confidence 9998887765543
No 43
>PRK02769 histidine decarboxylase; Provisional
Probab=99.89 E-value=2.2e-21 Score=175.41 Aligned_cols=202 Identities=18% Similarity=0.143 Sum_probs=144.6
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh--cCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LKP 135 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~--~~~ 135 (286)
+....+.+...+.+.+ |++.... .......++|+++++++++++|+++++ ....+|+|+| +++.++.+. ..+
T Consensus 35 ~~~~~~~~~~~~~~n~--gnp~~~~-~~g~~~~~~e~~~~~~~a~l~g~~~~~--~~G~~TsGgTean~~a~~~ar~~~~ 109 (380)
T PRK02769 35 DYSALKRFFSFSINNC--GDPYSKS-NYPLNSFDFERDVMNFFAELFKIPFNE--SWGYITNGGTEGNLYGCYLARELFP 109 (380)
T ss_pred CHHHHHHHHHhhhccC--CCccccC-CCCCChHHHHHHHHHHHHHHhCCCCCC--CCEEEecChHHHHHHHHHHHHHhCC
Confidence 3444555555554434 3333211 111235688999999999999997543 1247789988 776554433 467
Q ss_pred CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccC
Q 023191 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD 211 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n-~g~~~~ 211 (286)
+++|++++.+|.++..+. ...|.+.+.++ .+ +++.+|+++|++++++. +|++|+++ .+| +|.+.|
T Consensus 110 ~~~ii~s~~~H~Sv~ka~--------~~lg~~~~~V~--~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp 178 (380)
T PRK02769 110 DGTLYYSKDTHYSVSKIA--------RLLRIKSRVIT--SL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN 178 (380)
T ss_pred CcEEEeCCCceehHHHHH--------HHcCCCCceec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC
Confidence 899999999998886543 34454455565 34 46889999999999872 38888887 555 889999
Q ss_pred HHHHHHHHHhcC---CEEEEeccccccccccCCCCCCC---CcceEEEeCCCCCCCCCCc-eEEEEecchhh
Q 023191 212 YERIRKVCNKQK---AIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (286)
Q Consensus 212 l~~I~~ia~~~~---~~vivD~a~~~g~~~~~~~~~~~---~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (286)
+++|+++|+++| +++++|+||+.+.++......++ .++|++++|+|||+++|.| |+++++++..+
T Consensus 179 i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~ 250 (380)
T PRK02769 179 IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVE 250 (380)
T ss_pred HHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhh
Confidence 999999999998 69999999998877532111111 1599999999999999999 99999987544
No 44
>PRK12414 putative aminotransferase; Provisional
Probab=99.89 E-value=9.4e-22 Score=179.06 Aligned_cols=233 Identities=14% Similarity=0.177 Sum_probs=163.2
Q ss_pred ccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 023191 27 LEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (286)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (286)
++.+...++..+.+. ....+.++|..|++. +++.+.+++.+.+.... ..|+...+..+++++++++++++
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~~~ 82 (384)
T PRK12414 11 LPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-------NQYAPMAGIAALREALAEKTERL 82 (384)
T ss_pred cccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-------CCcCCCCCcHHHHHHHHHHHHHH
Confidence 344455566655543 234567999988874 47888888877664311 12455677889999999999999
Q ss_pred CCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCC
Q 023191 105 FRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (286)
Q Consensus 105 ~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 183 (286)
+|++.+. ..+|++|+|++ ++..+++++++|||+|+++++.|.. +...+...|.+++.++ .+.+++.+|
T Consensus 83 ~g~~~~~-~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~--------~~~~~~~~g~~~~~v~--~~~~~~~~d 151 (384)
T PRK12414 83 YGARYDP-ASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDS--------YAPIVRLQGATPVAIK--LSPEDFRVN 151 (384)
T ss_pred hCCCCCC-CCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccc--------hHHHHHHcCCEEEEEe--cCccccccC
Confidence 9985311 01599999999 8777889999999999999955543 3334455676565555 443467899
Q ss_pred HHHHHHHhhhcCCcEEEEc-CCC-CCCc---cCHHHHHHHHHhcCCEEEEeccccccccccCCCCC-----CCCcceEEE
Q 023191 184 YDQLEKSATLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-----PFEYADVVT 253 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~-~~n-~g~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-----~~~~~D~v~ 253 (286)
++++++.+++ ++|+|+++ ++| +|.. .++++|+++|++|++++|+|+++..-......... .+....+++
T Consensus 152 ~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~ 230 (384)
T PRK12414 152 WDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIV 230 (384)
T ss_pred HHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEE
Confidence 9999999987 89999997 666 6754 45888999999999999999997532221111110 011134789
Q ss_pred eCCCCCC--CCCCceEEEEecchhhhhc
Q 023191 254 TTTHKSL--RGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 254 ~s~~K~l--~gp~gG~l~~~~~~~~~~~ 279 (286)
.|++|.| .|.|-|++++++++.+...
T Consensus 231 ~SfSK~~~~pGlRiG~~v~~~~l~~~l~ 258 (384)
T PRK12414 231 SSFGKSYHVTGWRVGYCLAPAELMDEIR 258 (384)
T ss_pred ecccccccCccceEEEEecCHHHHHHHH
Confidence 9999987 4455599999988765544
No 45
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.3e-21 Score=178.40 Aligned_cols=236 Identities=12% Similarity=0.080 Sum_probs=165.3
Q ss_pred ccccccChHHHHHHHHHHHHHHcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHH
Q 023191 25 APLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (286)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 102 (286)
+++....+.++..+.+...+..+.++|..|++ ++++.+++++.+.+.... ...|+...+..+++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~~~G~~~lr~~~~~~l~ 79 (389)
T PRK05957 6 SRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPE------NHKYQAVQGIPPLLEAITQKLQ 79 (389)
T ss_pred HHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCC------CCCCCCCCCCHHHHHHHHHHHH
Confidence 34444555566555554433345689988877 368889999988764321 1224555778899999999999
Q ss_pred HHCCCCCC-CcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCC
Q 023191 103 EAFRLDPE-KWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180 (286)
Q Consensus 103 ~~~g~~~~-~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 180 (286)
+.+|.+.+ . .+|++|+|++ ++..++.+++++||+|++++|.|..+. ..+...|.+++.++ .+ +++
T Consensus 80 ~~~g~~~~~~--~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~--------~~~~~~g~~~~~v~--~~-~~~ 146 (389)
T PRK05957 80 QDNGIELNNE--QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHE--------MAITMAGCQPILVP--TD-DNY 146 (389)
T ss_pred HHhCCCCCCC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHH--------HHHHhcCCEEEEee--cC-CCC
Confidence 99997422 1 3699999998 777788888999999999995554442 23345666565555 44 567
Q ss_pred CCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CC-C--cce
Q 023191 181 YIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF-E--YAD 250 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~-~--~~D 250 (286)
.+|++++++.+++ ++|+|+++ ++| +|...+ +++|+++|+++|+++|+|+++..-......... .+ + ...
T Consensus 147 ~~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 225 (389)
T PRK05957 147 QLQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHT 225 (389)
T ss_pred CcCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcE
Confidence 8999999999987 89999887 666 777666 888999999999999999996522211111111 11 1 134
Q ss_pred EEEeCCCCCCC--CCCceEEEEecchhhhhcc
Q 023191 251 VVTTTTHKSLR--GPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 251 ~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~ 280 (286)
+++.|++|.++ |.|-|++++++++.+..++
T Consensus 226 i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~ 257 (389)
T PRK05957 226 ISLYSLSKAYGFASWRIGYMVIPIHLLEAIKK 257 (389)
T ss_pred EEEecchhhccCccceeEEEecCHHHHHHHHH
Confidence 77999999874 4445999998887766653
No 46
>PRK08912 hypothetical protein; Provisional
Probab=99.89 E-value=1.3e-21 Score=178.34 Aligned_cols=238 Identities=12% Similarity=0.077 Sum_probs=167.0
Q ss_pred hhccccccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHH
Q 023191 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (286)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (286)
++|++++....+..+..+.... .....++|..+.+. .|+.+.+++.+.+.+.. ..|+...+..++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia 73 (387)
T PRK08912 2 KMGNPVFADLPTTIFEVMSQLA-REHGAINLGQGFPDDPGPEDVRRAAADALLDGS-------NQYPPMMGLPELRQAVA 73 (387)
T ss_pred chhhHHHhhCCCCHHHHHHHHH-hhCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHH
Confidence 3455556666666666666543 22467898877663 46778887776654321 12455577789999999
Q ss_pred HHHHHHCCCCCCCcce-eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 99 KRALEAFRLDPEKWGV-NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 99 ~~~~~~~g~~~~~~~~-~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+++.+.+|.+.+. . +|++|+|++ ++.+++.+++++||+|++++|.| ..+...+...|.+++.++ ++
T Consensus 74 ~~~~~~~g~~~~~--~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y--------~~~~~~~~~~g~~~~~~~--~~ 141 (387)
T PRK08912 74 AHYARFQGLDLDP--ETEVMVTSGATEALAAALLALVEPGDEVVLFQPLY--------DAYLPLIRRAGGVPRLVR--LE 141 (387)
T ss_pred HHHHHHhCCCCCC--cccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCc--------hhhHHHHHHcCCEEEEEe--cC
Confidence 9999888864332 2 599999999 88778899999999999999544 444445566776665555 44
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC-----CC
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-----PF 246 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-----~~ 246 (286)
.+++.+|++++++.+.+ ++|+|+++ |+| +|...+ +++|.++|++|++++|+|+++............ ..
T Consensus 142 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 220 (387)
T PRK08912 142 PPHWRLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGM 220 (387)
T ss_pred cccCcCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCc
Confidence 34678999999999887 89999987 777 776655 677899999999999999997532221111110 11
Q ss_pred CcceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 247 EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 247 ~~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
...++++.|++|.|+ |.+-|+++++.++.+..+
T Consensus 221 ~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~ 255 (387)
T PRK08912 221 RERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLA 255 (387)
T ss_pred cCceEEEeechhhccCcCceeEEEecCHHHHHHHH
Confidence 135688999999874 334599999888776554
No 47
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.88 E-value=3.4e-22 Score=184.94 Aligned_cols=228 Identities=14% Similarity=0.139 Sum_probs=154.3
Q ss_pred cccccChHHHHHHHHHHHH----HHcCceecCCCC---CCCH----HHHHHhccccccCCCCCCCCCcccCCcchHHHHH
Q 023191 26 PLEVVDPEIADIIEHEKAR----QWKGLELIPSEN---FTSV----SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~e~---~~~~----~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 94 (286)
+++.+.+.....+.+.... ..+.++|..+++ +.++ .+.+++.+++... ...|++..+..+|+
T Consensus 12 r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-------~~~Y~~~~g~~~Lr 84 (460)
T PRK13238 12 RIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-------DEAYAGSRSYYRLE 84 (460)
T ss_pred eeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-------CcccCCCCCHHHHH
Confidence 3344555444434333222 236789988886 3332 4677777666431 12356677888888
Q ss_pred HHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 95 ~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
+.++++++.+. |++|+|++ ++.++++++++||| |++++ |.|..+...+.+.|.+++.+++
T Consensus 85 ----eaia~~~~~~~------vv~t~ggt~A~~~~~~all~pGD-Vii~~--------p~~~~~~~~i~~~G~~~v~v~~ 145 (460)
T PRK13238 85 ----DAVKDIFGYPY------TIPTHQGRAAEQILFPVLIKKGD-VVPSN--------YHFDTTRAHIELNGATAVDLVI 145 (460)
T ss_pred ----HHHHHHhCCCc------EEECCCHHHHHHHHHHHhCCCCC-EEccC--------CcccchHHHHHHcCCEEEEEec
Confidence 45566666553 88888888 88878999999999 88888 4444444456678877777765
Q ss_pred ccC-----CCCC--CCCHHHHHHHhhh---cCCcEEEEc-CCC-CC-Ccc---CHHHHHHHHHhcCCEEEEecccccc-c
Q 023191 174 RLN-----ESTG--YIDYDQLEKSATL---FRPKLIVAG-ASA-YA-RLY---DYERIRKVCNKQKAIMLADMAHISG-L 236 (286)
Q Consensus 174 ~~~-----~~~~--~~d~e~l~~~i~~---~~tk~v~i~-~~n-~g-~~~---~l~~I~~ia~~~~~~vivD~a~~~g-~ 236 (286)
+.. .+.+ .+|+++|++.+++ .+|++|+++ ++| +| ... ++++|.++|++||++||+|+||..+ .
T Consensus 146 ~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a 225 (460)
T PRK13238 146 DEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENA 225 (460)
T ss_pred cccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhh
Confidence 321 0234 4999999999985 268999998 667 44 444 4679999999999999999998653 2
Q ss_pred cccC-----CCCCC--------CCcceEEEeCCCCCCCCCCceEEEEec-chhhhhc
Q 023191 237 VAAG-----VIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRK-GVKEINK 279 (286)
Q Consensus 237 ~~~~-----~~~~~--------~~~~D~v~~s~~K~l~gp~gG~l~~~~-~~~~~~~ 279 (286)
+... ..... ..++|++++|++|.+.+|.||++++++ ++....+
T Consensus 226 ~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~ 282 (460)
T PRK13238 226 YFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECR 282 (460)
T ss_pred hhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhh
Confidence 1111 11111 134899999999999999999999996 4544443
No 48
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.6e-21 Score=178.40 Aligned_cols=233 Identities=16% Similarity=0.148 Sum_probs=161.5
Q ss_pred cccccChHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 26 PLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
++....++.+..+.....+. .+.++|..+++. +++.+++++.+.+.+....+| + ..+..++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y------~-~~G~~~lr~aia~ 80 (399)
T PRK07681 8 RMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGY------T-LSGIQEFHEAVTE 80 (399)
T ss_pred HHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCC------C-CCCcHHHHHHHHH
Confidence 33434455555554443222 356899888874 678888888876643110122 2 2467789999999
Q ss_pred HHHHHCCC--CCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 100 RALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 100 ~~~~~~g~--~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
++.+.+|. ++++ +|++|+|++ ++..++.+++++||.|++++ |.|+.+...+...|.+++.+| ++
T Consensus 81 ~~~~~~g~~~~~~~---~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~--------P~y~~~~~~~~~~G~~~~~v~--~~ 147 (399)
T PRK07681 81 YYNNTHNVILNADK---EVLLLMGSQDGLVHLPMVYANPGDIILVPD--------PGYTAYETGIQMAGATSYYMP--LK 147 (399)
T ss_pred HHHHHhCCCCCCCC---eEEECCCcHHHHHHHHHHhCCCCCEEEECC--------CCccchHHHHHhcCCEEEEEe--cC
Confidence 99888776 4422 599999999 88778899999999999999 555555545667787666665 44
Q ss_pred C-CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCC-
Q 023191 177 E-STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE- 247 (286)
Q Consensus 177 ~-~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~- 247 (286)
. +++.+|++++++.+.+ ++|+|+++ |+| +|...+ +++|+++|++|+++||+|+++..-......... .+.
T Consensus 148 ~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~ 226 (399)
T PRK07681 148 KENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPG 226 (399)
T ss_pred CCCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCC
Confidence 3 3568999999998876 89999998 777 776666 778899999999999999997532222111111 111
Q ss_pred --cceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 248 --YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 248 --~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
...+++.|++|.|+ |.+.|+++.++++.+..+
T Consensus 227 ~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~ 262 (399)
T PRK07681 227 AKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALT 262 (399)
T ss_pred CcccEEEEeecccccCCccceeEEEecCHHHHHHHH
Confidence 13477899999874 445599999888776554
No 49
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.88 E-value=8.9e-22 Score=177.69 Aligned_cols=190 Identities=14% Similarity=0.061 Sum_probs=139.2
Q ss_pred CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh
Q 023191 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~ 132 (286)
|-+.+|++++++|.+++.+ | ...+++.+++++++++++|.+. +++++|++ ++.+++.++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~-------------~~~~~~~~~~~~~~a~~~g~~~------~~~~~g~t~al~~al~al 80 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y-------------FEIKELVNKTGEYIANLLGVED------AVIVSSASAGIAQSVAAV 80 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C-------------CCHHHHHHHHHHHHHHhhCCCe------EEEEcCHHHHHHHHHHHH
Confidence 4446899999999988644 2 1245777888899999999763 67888888 888899999
Q ss_pred cCCCC---------------eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCc
Q 023191 133 LKPHD---------------RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (286)
Q Consensus 133 ~~~Gd---------------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk 197 (286)
+++|| +|+++.+.+..+..+. ...+.+.|.+++.+ +. ++.+|++++++++++ +|+
T Consensus 81 ~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~----~~~~~~~g~~~v~v--~~---~~~~d~~~le~ai~~-~t~ 150 (363)
T TIGR01437 81 ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPV----ETMVRLGGGKVVEA--GY---ANECSAEQLEAAITE-KTA 150 (363)
T ss_pred hcCCCcchhhcccccccccceEEEECccchhcCCch----HHHHHhcCCeEEEE--cC---CCCCCHHHHHHhcCh-hce
Confidence 99998 7777663332221111 11334566555444 33 356999999999998 899
Q ss_pred EEE-Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEEEEecch
Q 023191 198 LIV-AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGV 274 (286)
Q Consensus 198 ~v~-i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~ 274 (286)
+++ ++ ++| +|...|+++|+++|++||+++|+|++|..... ..... ++|++++|+||+|+||++|+++.++++
T Consensus 151 ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~--~~~~~---g~D~~~~S~~K~l~gp~~G~l~~~~~~ 225 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQ--KYYRL---GADLVIYSGAKAIEGPTSGLVLGKKKY 225 (363)
T ss_pred EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchH--HHHHc---CCCEEEEeCCcccCCCceEEEEEcHHH
Confidence 766 45 566 66788999999999999999999999863210 00011 489999999999999999999988766
Q ss_pred hhhh
Q 023191 275 KEIN 278 (286)
Q Consensus 275 ~~~~ 278 (286)
.+..
T Consensus 226 i~~~ 229 (363)
T TIGR01437 226 IEWV 229 (363)
T ss_pred HHHH
Confidence 5543
No 50
>PLN02368 alanine transaminase
Probab=99.88 E-value=3e-21 Score=176.37 Aligned_cols=186 Identities=13% Similarity=0.089 Sum_probs=133.6
Q ss_pred ccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc-CCCCeEEeccCCCCcccCccccccccc
Q 023191 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKK 160 (286)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~-~~Gd~Vl~~~~~~~~~~~~~~~~~~~~ 160 (286)
.|+...+..+|++++.+++.+.+|++.+. .+|++|+|++ ++..++++++ +|||+|++++ |.|+.|...
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~--------P~Y~~y~~~ 171 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSDP--ELIFLTDGASKGVMQILNAVIRGEKDGVLVPV--------PQYPLYSAT 171 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeC--------CCCccHHHH
Confidence 35666788899999999999888863322 3699999999 8877888887 7999999999 666666656
Q ss_pred cccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEec
Q 023191 161 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 161 ~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~ 230 (286)
+...|.+++.+++..+ ++|.+|++++++.+++. ++|+++++ |+| +|.+.+ +++|+++|++|+++||+|+
T Consensus 172 ~~~~g~~~v~v~~~~~-~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE 250 (407)
T PLN02368 172 ISLLGGTLVPYYLEES-ENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDE 250 (407)
T ss_pred HHHcCCEEEEEecccc-cCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 6778876665654322 45789999999988641 58888886 777 775554 6788889999999999999
Q ss_pred cccccccccC-CCCC------CC----C-c-ceEEEeCCCCCC---CCCCceEEEE---ecchhhhhc
Q 023191 231 AHISGLVAAG-VIPS------PF----E-Y-ADVVTTTTHKSL---RGPRGAMIFF---RKGVKEINK 279 (286)
Q Consensus 231 a~~~g~~~~~-~~~~------~~----~-~-~D~v~~s~~K~l---~gp~gG~l~~---~~~~~~~~~ 279 (286)
++..-..... .+.. .+ . . .-+++.|++|+| .|+|.|++++ +.++.+...
T Consensus 251 ~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~ 318 (407)
T PLN02368 251 VYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIY 318 (407)
T ss_pred cccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHH
Confidence 9643222111 1111 00 1 1 236689999986 5888899985 555554443
No 51
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.4e-21 Score=178.35 Aligned_cols=230 Identities=14% Similarity=0.109 Sum_probs=159.7
Q ss_pred ccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC
Q 023191 29 VVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR 106 (286)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g 106 (286)
.+....+..+.+......+.++|..+++. +++.+++++.+.+.... ..|.+..+..++++++++++.+.+|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g 88 (391)
T PRK08361 16 LIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEGW-------THYTPNAGIPELREAIAEYYKKFYG 88 (391)
T ss_pred hCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 33344444444433223457999988874 46788888877665421 1134446778999999999988777
Q ss_pred CCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCC-CCCCCH
Q 023191 107 LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TGYIDY 184 (286)
Q Consensus 107 ~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~ 184 (286)
...+. .+|++|+|++ ++.+++.+++++||.|+++++.|.++ ...+...|.+++.++ ++.+ ++.+|+
T Consensus 89 ~~~~~--~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~--------~~~~~~~g~~~~~v~--~~~~~~~~~d~ 156 (391)
T PRK08361 89 VDVDV--DNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCY--------VEDAKIAEAKPIRIP--LREENEFQPDP 156 (391)
T ss_pred CCCCc--ccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccc--------HHHHHHcCCEEEEEe--cCCccCCCCCH
Confidence 53222 3599999999 87778889999999999999655444 334455676665565 4433 568999
Q ss_pred HHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC--CC-cceEEEeCC
Q 023191 185 DQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--FE-YADVVTTTT 256 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~~-~~D~v~~s~ 256 (286)
+++++.+++ ++++++++ |+| +|...+ +++|+++|+++++++|+|+++............. +. ..++++.|+
T Consensus 157 ~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~ 235 (391)
T PRK08361 157 DELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSF 235 (391)
T ss_pred HHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecC
Confidence 999999987 89999887 767 777777 7889999999999999999975432221111110 11 256889999
Q ss_pred CCCCCCC--CceEEEEecchhhhh
Q 023191 257 HKSLRGP--RGAMIFFRKGVKEIN 278 (286)
Q Consensus 257 ~K~l~gp--~gG~l~~~~~~~~~~ 278 (286)
+|.|+.| +.|++++++++.+..
T Consensus 236 SK~~~~~GlRiG~~~~~~~~~~~~ 259 (391)
T PRK08361 236 SKTFAMTGWRLGFVIAPEQVIKDM 259 (391)
T ss_pred chhcCCcHhhhhhhccCHHHHHHH
Confidence 9988544 349999987766544
No 52
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=9.1e-22 Score=174.85 Aligned_cols=191 Identities=18% Similarity=0.187 Sum_probs=149.0
Q ss_pred CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh
Q 023191 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL 132 (286)
Q Consensus 53 ~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~ 132 (286)
...+...++.++++.+.+.+.+. ...+...++| +.+++++|+.. .|.+.||++|+.++++++
T Consensus 8 ~~~p~i~~~e~~~v~~vl~sg~i---------~~G~~v~~FE----~~~ae~~G~k~-----ava~~sgT~AL~laL~al 69 (374)
T COG0399 8 FSRPSIGEEELAAVQEVLKSGWL---------TGGPFVRRFE----QAFAEYLGVKY-----AVAVSSGTAALHLALLAL 69 (374)
T ss_pred CCCCCcchHHHHHHHHHHHcCCe---------ecChHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHHHhc
Confidence 34445678889999999988552 1124566777 77888899987 488888888887788877
Q ss_pred -cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccC
Q 023191 133 -LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYD 211 (286)
Q Consensus 133 -~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~ 211 (286)
+.|||+|++++..+.+... .+...|.++ +.+++|++++.+|++.||++|++ +||+|+. .+-.|...+
T Consensus 70 ~ig~GDeVI~ps~TfvATan--------~i~~~Ga~P--VFvDid~~T~nid~~~ie~aIt~-~tKAIip-Vhl~G~~~d 137 (374)
T COG0399 70 AIGPGDEVIVPSFTFVATAN--------AVLLVGAKP--VFVDIDPDTLNIDPDLIEAAITP-RTKAIIP-VHLAGQPCD 137 (374)
T ss_pred CCCCCCEEEecCCchHHHHH--------HHHHcCCeE--EEEecCCcccCCCHHHHHHHccc-CCeEEEE-ehhccCCCC
Confidence 8999999999977766654 344667555 55578888899999999999999 8999974 233788889
Q ss_pred HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (286)
+++|.++|++||++||.|+||+.|....+.....+..+-++.|..+|.+....||++++|++
T Consensus 138 m~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ 199 (374)
T COG0399 138 MDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDE 199 (374)
T ss_pred HHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccccCceEEEeCCH
Confidence 99999999999999999999999999877755544223344444569997779999999984
No 53
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.88 E-value=3.4e-21 Score=175.43 Aligned_cols=236 Identities=16% Similarity=0.116 Sum_probs=161.7
Q ss_pred cccccChHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 26 PLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
++....++.+..+.....+. .+.++|..+++. +++.+.+++.+.+..... ..|+...+..++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~ 80 (385)
T PRK09276 7 RIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPEN------HQYPSYEGMLEFRKAVAD 80 (385)
T ss_pred HhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCcHHHHHHHHH
Confidence 34445555555444432221 356899988874 578888888877643111 124445667899999999
Q ss_pred HHHHHCCCCCCCcce-eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC
Q 023191 100 RALEAFRLDPEKWGV-NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (286)
Q Consensus 100 ~~~~~~g~~~~~~~~-~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (286)
++.+.+|.+.+. . +|++|+|++ ++..++.++++|||+|++++ |.|+.+...+...|.+++.++++.+
T Consensus 81 ~~~~~~g~~~~~--~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~--------P~y~~~~~~~~~~g~~~~~v~~~~~- 149 (385)
T PRK09276 81 WYKRRFGVELDP--ETEVISLIGSKEGIAHIPLAFVNPGDVVLVPD--------PGYPVYKIGTIFAGGEPYFMPLKEE- 149 (385)
T ss_pred HHHHHhCCCCCC--CCcEEEccCcHHHHHHHHHHhCCCCCEEEEcC--------CCCcChHHHHHHcCCEEEEEecCCC-
Confidence 999887863322 2 499999998 87778899999999999999 5554444455567776666664322
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CC---C
Q 023191 178 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF---E 247 (286)
Q Consensus 178 ~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~---~ 247 (286)
+++.+|++++++.+.+ ++++|+++ |+| +|...+ +++|+++|++|+++||+|+++............ .+ .
T Consensus 150 ~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 228 (385)
T PRK09276 150 NGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAK 228 (385)
T ss_pred CCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCc
Confidence 3567899999988876 89999998 766 776665 578889999999999999997533221111111 11 1
Q ss_pred cceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 248 YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 248 ~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
...+++.|++|.|+ |.+.|++++++++.+..+
T Consensus 229 ~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~ 262 (385)
T PRK09276 229 DVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLG 262 (385)
T ss_pred CCEEEEecchhhcCCcchhheeeeCCHHHHHHHH
Confidence 24577899999874 334599999888776554
No 54
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.88 E-value=2.1e-21 Score=175.46 Aligned_cols=200 Identities=13% Similarity=0.104 Sum_probs=148.4
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (286)
+-|++|....++.|.+++.....+ + . ....++.+.+++.+++++|+++++ ..|++|+|++ ++..
T Consensus 5 ~l~~pgp~~~~~~v~~~~~~~~~~-~----------~--~~~~~~~~~~r~~la~l~~~~~~~--~~i~~t~~~t~al~~ 69 (363)
T TIGR02326 5 LLLTPGPLTTSRTVKEAMLFDWCT-W----------D--SDYNIVVEQIRQQLLALATAEEGY--TSVLLQGSGTFAVEA 69 (363)
T ss_pred eEecCCCCCCCHHHHHHhCCCCCC-C----------C--hHHHHHHHHHHHHHHHHhCCCCCc--eEEEEcCCCHHHHHH
Confidence 457777778899999988764421 1 1 234456667889999999997542 2588888877 8877
Q ss_pred HHHHhcCCCCeEEeccC-CCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc-CC
Q 023191 128 VYTALLKPHDRIMALDL-PHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-AS 204 (286)
Q Consensus 128 ~l~a~~~~Gd~Vl~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-~tk~v~i~-~~ 204 (286)
++.+++.+||.+++..+ .|+..+ ...+...|.+++.+++ + +++.+|++++++++++. +++++.+. ..
T Consensus 70 ~~~~l~~~~~~vlv~~~~~~~~~~-------~~~a~~~g~~~~~v~~--~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 139 (363)
T TIGR02326 70 VIGSAVPKDGKLLVVINGAYGARI-------VQIAEYLGIPHHVVDT--G-EVEPPDVVEVEAILAADPAITHIALVHCE 139 (363)
T ss_pred HHHhcCCCCCeEEEEeCChhhHHH-------HHHHHHcCCceEEEeC--C-CCCCCCHHHHHHHHhhCCCccEEEEEeec
Confidence 88899899988777552 221110 1123445666666653 3 45789999999998752 35666654 44
Q ss_pred C-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhh
Q 023191 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (286)
Q Consensus 205 n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (286)
| +|...|+++|.++|++||+++++|++|+.|..+.++..+. +|++++|+||||+||.| |++++++++.+
T Consensus 140 ~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~---~D~~~~s~~K~l~~p~G~G~l~~~~~~~~ 210 (363)
T TIGR02326 140 TTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELH---IDYLISSANKCIQGVPGFGFVIARQAELA 210 (363)
T ss_pred CCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcC---ccEEEecCccccccCCcceEEEECHHHHH
Confidence 4 8889999999999999999999999999988776665555 99999999999999999 99999987554
No 55
>PRK07550 hypothetical protein; Provisional
Probab=99.88 E-value=3e-21 Score=175.87 Aligned_cols=211 Identities=14% Similarity=0.082 Sum_probs=149.5
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
..++|..++++ +++.+.+++.+.+.+.. ...|+...+..+|++++.+++.+.+|..... .+|++|+|++
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~ 101 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPA------AHLYGPVEGLPELREAYAAHYSRLYGAAISP--EQVHITSGCNQ 101 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcC------CcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence 56888888874 47788888877653211 1124455678899999999999888864322 3699999988
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++..++.+++++||+|++++|.|..+ ...+...|.+++.++ .+. +++.+|++++++.+++ ++++|+++
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~--------~~~~~~~g~~~~~v~--~~~~~~~~~~~~~l~~~~~~-~~~~v~~~ 170 (386)
T PRK07550 102 AFWAAMVTLAGAGDEVILPLPWYFNH--------KMWLDMLGIRPVYLP--CDEGPGLLPDPAAAEALITP-RTRAIALV 170 (386)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcch--------HHHHHhcCCEEEEEe--cCCCcCCCCCHHHHHHHhcc-cCcEEEEe
Confidence 87778889999999999999555443 323456676665555 442 4567899999999987 89998876
Q ss_pred -CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC-CCC-----cceEEEeCCCCCCC--CCCceEEE
Q 023191 203 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFE-----YADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 203 -~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~-----~~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
|+| +|...+ +++|+++|++||++||+|+++.. ......... .+. ...+++.|++|+++ |.+.|+++
T Consensus 171 ~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~ 249 (386)
T PRK07550 171 TPNNPTGVVYPPELLHELYDLARRHGIALILDETYRD-FDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVV 249 (386)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchh-hccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeee
Confidence 766 665555 78999999999999999999652 221111111 111 12366999999885 55669999
Q ss_pred Eecchhhh
Q 023191 270 FRKGVKEI 277 (286)
Q Consensus 270 ~~~~~~~~ 277 (286)
+++++...
T Consensus 250 ~~~~~~~~ 257 (386)
T PRK07550 250 ASPARIAE 257 (386)
T ss_pred cCHHHHHH
Confidence 98766543
No 56
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.88 E-value=3.7e-21 Score=175.72 Aligned_cols=235 Identities=14% Similarity=0.121 Sum_probs=158.6
Q ss_pred ccccChHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHH
Q 023191 27 LEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (286)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~----~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (286)
+..+.++.+..+.+...+ ..+.++|..+.+. +|+.+.+++.+.+.... ...|+...+..+|++++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~aia~~ 85 (394)
T PRK05942 12 LQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQ------NHGYPPFEGTASFRQAITDW 85 (394)
T ss_pred hccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC------CccCCCCCCCHHHHHHHHHH
Confidence 344445555444332221 1356888877653 45667777666553211 12245557788999999999
Q ss_pred HHHHCCCCCCCcce-eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCC
Q 023191 101 ALEAFRLDPEKWGV-NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (286)
Q Consensus 101 ~~~~~g~~~~~~~~-~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (286)
+.+.+|++.+. . +|++|+|++ ++..++.++++|||+|++++|.|+.+.. .+...|.+++.++++.+ +
T Consensus 86 ~~~~~~~~~~~--~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~~~~~-~ 154 (394)
T PRK05942 86 YHRRYGVELDP--DSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFR--------GPLIAGAQIYPIILKPE-N 154 (394)
T ss_pred HHHHHCCCcCC--CCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCCEEEEeecCCc-c
Confidence 98887863222 2 488999999 8877888999999999999966554432 33456766655554322 3
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC---C---C
Q 023191 179 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---F---E 247 (286)
Q Consensus 179 ~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~---~---~ 247 (286)
++.+|++++++.+.+ ++|+|+++ |+| +|...+ +++|.++|++|+++||+|+++...... +..... + .
T Consensus 155 ~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~~~~ 232 (394)
T PRK05942 155 DWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFD-GYQPTSLLEIPGAK 232 (394)
T ss_pred CCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccC-CCCCCChhhCCCcc
Confidence 568999999999877 99999998 777 776666 778899999999999999996533221 111111 1 1
Q ss_pred cceEEEeCCCCCCC--CCCceEEEEecchhhhhcc
Q 023191 248 YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 248 ~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~ 280 (286)
...+++.|++|.|+ |.+.|++++++++.+..++
T Consensus 233 ~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~ 267 (394)
T PRK05942 233 DIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRT 267 (394)
T ss_pred ccEEEEecchhccCChhhheeeeecCHHHHHHHHH
Confidence 23477899999774 3345999998887766653
No 57
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.88 E-value=1.6e-21 Score=182.39 Aligned_cols=206 Identities=15% Similarity=0.123 Sum_probs=145.3
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc-CCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-KPH 136 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~-~~G 136 (286)
|..+++++.+++.... .....|+...+..+|++++.+++.+..|++.+. .+|++|+|++ ++..++++++ +||
T Consensus 90 P~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~~g 163 (481)
T PTZ00377 90 PADVVARAKEYLNAIG----GGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDP--SDIFLTDGASSGIKLLLQLLIGDPS 163 (481)
T ss_pred CHHHHHHHHHHHHhCC----CcccCcCcccCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHHHHHHHHHHHhccCCC
Confidence 3467777766554311 112336777889999999999999887864433 4699999999 8887889998 799
Q ss_pred CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCc
Q 023191 137 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARL 209 (286)
Q Consensus 137 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~-~~n-~g~~ 209 (286)
|+|++++ |.|+.|...+...|..++.++++.+ ++|.+|++++++.+++. ++|+|+++ |+| +|..
T Consensus 164 D~Vlv~~--------P~y~~y~~~~~~~g~~~v~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~ 234 (481)
T PTZ00377 164 DGVMIPI--------PQYPLYSAAITLLGGKQVPYYLDEE-KGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQV 234 (481)
T ss_pred CEEEECC--------CCchhHHHHHHHcCCEEEEEEeccc-cCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcC
Confidence 9999999 6666555566778877766654322 45789999999998642 68888776 777 7766
Q ss_pred cC---HHHHHHHHHhcCCEEEEeccccccccccC-CCCC------CCC-c-----ceEEEeCCCCCC---CCCCceEEEE
Q 023191 210 YD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPS------PFE-Y-----ADVVTTTTHKSL---RGPRGAMIFF 270 (286)
Q Consensus 210 ~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~------~~~-~-----~D~v~~s~~K~l---~gp~gG~l~~ 270 (286)
.+ +++|+++|++|+++||+|+++..-....+ .... .+. . .-+++.|++|.+ +|.|.|++.+
T Consensus 235 ~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~ 314 (481)
T PTZ00377 235 LTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFEL 314 (481)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEE
Confidence 66 78899999999999999999653222111 1111 011 0 125688999974 5888899987
Q ss_pred ---ecchhhhhc
Q 023191 271 ---RKGVKEINK 279 (286)
Q Consensus 271 ---~~~~~~~~~ 279 (286)
+.++.+...
T Consensus 315 ~~~p~~li~~l~ 326 (481)
T PTZ00377 315 TNIPPEVREQIY 326 (481)
T ss_pred eCCCHHHHHHHH
Confidence 566665443
No 58
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.88 E-value=2.2e-21 Score=177.39 Aligned_cols=232 Identities=12% Similarity=0.077 Sum_probs=161.3
Q ss_pred ccccChHHHHHHHHHHHHH-----HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 27 LEVVDPEIADIIEHEKARQ-----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~-----~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
+..+.++.+..+.+..... .+.++|..++++ +++.+++++.+.+... ..|+...+..++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--------~~Y~~~~G~~~lr~~ia~ 76 (396)
T PRK09147 5 LDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDGL--------ASYPTTAGLPALREAIAA 76 (396)
T ss_pred hhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhhh--------cCCCCCCCCHHHHHHHHH
Confidence 3444454555444443322 367899888874 5788888887765321 123445667889999999
Q ss_pred HHHHHCCCC---CCCcceeEEeCCChH-HHHHHHHHhcCC---CCeEEeccCCCCcccCccccccccccccceeeeEEEe
Q 023191 100 RALEAFRLD---PEKWGVNVQSLSGSP-SNFQVYTALLKP---HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (286)
Q Consensus 100 ~~~~~~g~~---~~~~~~~v~~~sG~~-a~~~~l~a~~~~---Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (286)
++.+.+|.+ +++ +|++|+|++ ++..+++++++| ||.|++++ |.|..+...+...|.+++.+|
T Consensus 77 ~~~~~~g~~~~~~~~---~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~--------P~y~~~~~~~~~~g~~~~~vp 145 (396)
T PRK09147 77 WLERRYGLPALDPAT---QVLPVNGSREALFAFAQTVIDRDGPGPLVVCPN--------PFYQIYEGAALLAGAEPYFLN 145 (396)
T ss_pred HHHHHhCCCcCCccc---eEEECCChHHHHHHHHHHHcCCCCCCCEEEEcC--------CCccchHHHHHhcCCEEEEec
Confidence 999888854 332 599999999 888799999999 99999999 565555545667787666665
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCCC-C
Q 023191 173 YRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-F 246 (286)
Q Consensus 173 ~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-~ 246 (286)
++-+ +++.+|++++++.+.+ ++|+++++ |+| +|... .+++|+++|++|+++||+|+++..-.......... +
T Consensus 146 ~~~~-~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 223 (396)
T PRK09147 146 CDPA-NNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLL 223 (396)
T ss_pred cCcc-ccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhh
Confidence 4312 3578999999988876 89999998 766 77555 47788899999999999999965432211100000 0
Q ss_pred --------C--cceEEEeCCCCCC--CCCCceEEEEecchhhhhc
Q 023191 247 --------E--YADVVTTTTHKSL--RGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 247 --------~--~~D~v~~s~~K~l--~gp~gG~l~~~~~~~~~~~ 279 (286)
. ..-+++.|++|.+ .|.+.|++++++++.+..+
T Consensus 224 ~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~ 268 (396)
T PRK09147 224 EAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFL 268 (396)
T ss_pred hhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHH
Confidence 0 1237899999964 5556699999888765544
No 59
>PRK07337 aminotransferase; Validated
Probab=99.88 E-value=2.5e-21 Score=176.48 Aligned_cols=232 Identities=13% Similarity=0.075 Sum_probs=158.8
Q ss_pred ccccChHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHH
Q 023191 27 LEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (286)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~----~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (286)
+....+..+..+.....+. .+.++|..+++. +++.+.+++.+.+.+.. ..|+...+..++++++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~ 79 (388)
T PRK07337 7 VDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGV-------TQYTSALGLAPLREAIAAW 79 (388)
T ss_pred hHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHH
Confidence 3344444444444433222 356889888774 57788888887765311 1134456778999999999
Q ss_pred HHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-C
Q 023191 101 ALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-S 178 (286)
Q Consensus 101 ~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~ 178 (286)
+.+.+|+..+. .+|++|+|++ ++..++.+++++||+|++++|.|+++. ..+...|.+++.++ .+. +
T Consensus 80 ~~~~~~~~~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~~~~~~~--~~~~~ 147 (388)
T PRK07337 80 YARRFGLDVAP--ERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNR--------HFVAAAEGRPVLVP--SGPAE 147 (388)
T ss_pred HHHHhCCCCCh--HhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH--------HHHHHcCCEEEEee--cCCcc
Confidence 98888863322 3699999999 877788899999999999996665543 23345565565565 442 3
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cce-E
Q 023191 179 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YAD-V 251 (286)
Q Consensus 179 ~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D-~ 251 (286)
++.+|++++++.+.+ ++++|+++ |+| +|...+ +++|+++|+++++++|+|+++. .....+.....+. +.+ +
T Consensus 148 ~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~vi 225 (388)
T PRK07337 148 RFQLTAADVEAAWGE-RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQ-GLSYDAAPVSALSLGDDVI 225 (388)
T ss_pred CCcCCHHHHHhhcCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCcChhhccCCEE
Confidence 578999999999987 89999887 777 775554 7788999999999999999954 2222111111111 233 4
Q ss_pred EEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 252 VTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 252 v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
++.|++|.|+ |.+.|++++++++.+..+
T Consensus 226 ~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~ 255 (388)
T PRK07337 226 TINSFSKYFNMTGWRLGWLVVPEALVGTFE 255 (388)
T ss_pred EEEechhhcCCchhheeeeecCHHHHHHHH
Confidence 5789999885 555699999887665443
No 60
>PRK08068 transaminase; Reviewed
Probab=99.88 E-value=4.1e-21 Score=175.20 Aligned_cols=212 Identities=19% Similarity=0.224 Sum_probs=150.9
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC--CCCCcceeEEeCCCh
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~~~~v~~~sG~ 122 (286)
+.++|..+++. +++.+.+++.+.+..... ..|++..+..+|++++++++.+.+|. +++. +|++|+|+
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~---~i~it~G~ 103 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENPAN------HKYSPFRGYPFLKEAAADFYKREYGVTLDPET---EVAILFGG 103 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---cEEEcCCc
Confidence 56899887653 467788888776643211 12444567789999999999877775 4431 59999999
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEE
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+ ++..++.+++++||.|++++ |.|..+...+...|.+++.++ ++. +++.+|++++++.+.+ ++++|+
T Consensus 104 ~~~l~~~~~~~~~~gd~vlv~~--------P~y~~~~~~~~~~g~~~~~i~--~~~~~~~~~d~~~l~~~~~~-~~~~v~ 172 (389)
T PRK08068 104 KAGLVELPQCLMNPGDTILVPD--------PGYPDYLSGVALARAQFETMP--LIAENNFLPDYTKIPEEVAE-KAKLMY 172 (389)
T ss_pred HHHHHHHHHHhCCCCCEEEEcC--------CCCcchHHHHHhcCCEEEEee--cccccCCCCCHHHHHHhccc-cceEEE
Confidence 8 77768899999999999999 555544445567787666665 443 3578999999998876 899999
Q ss_pred Ec-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC-CC-----cceEEEeCCCCCCC--CCCceE
Q 023191 201 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-FE-----YADVVTTTTHKSLR--GPRGAM 267 (286)
Q Consensus 201 i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-~~-----~~D~v~~s~~K~l~--gp~gG~ 267 (286)
++ |+| +|...+ +++|+++|++|+++||+|+++.. ....+..... +. ...+++.|++|.|+ |.|-|+
T Consensus 173 l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~-~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 251 (389)
T PRK08068 173 LNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGA-IGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAF 251 (389)
T ss_pred EECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhh-hccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEe
Confidence 98 766 776665 56888899999999999999642 1111111101 11 13478999999884 445599
Q ss_pred EEEecchhhhhc
Q 023191 268 IFFRKGVKEINK 279 (286)
Q Consensus 268 l~~~~~~~~~~~ 279 (286)
++.++++.+..+
T Consensus 252 ~~~~~~l~~~l~ 263 (389)
T PRK08068 252 AVGNESVIEAIN 263 (389)
T ss_pred EecCHHHHHHHH
Confidence 999888776654
No 61
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.88 E-value=7.5e-21 Score=174.35 Aligned_cols=229 Identities=16% Similarity=0.125 Sum_probs=160.2
Q ss_pred cChHHHHHHHHHHHHH------HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 023191 30 VDPEIADIIEHEKARQ------WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (286)
Q Consensus 30 ~~~~~~~~~~~~~~~~------~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 101 (286)
...+.+..+....++. .+.++|..++++ +++.+.+++.+.+..... ..|+. .+..++++++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~------~~Y~~-~G~~~lr~aia~~~ 94 (410)
T PRK06290 22 TVIYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPEN------RGYAD-NGIQEFKEAAARYM 94 (410)
T ss_pred CchhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCC-CCcHHHHHHHHHHH
Confidence 3445555555433322 146899988885 577888888765532111 11332 56789999999999
Q ss_pred HHHCCCC-CCCcce-eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-
Q 023191 102 LEAFRLD-PEKWGV-NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE- 177 (286)
Q Consensus 102 ~~~~g~~-~~~~~~-~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~- 177 (286)
.+.+|++ .+. . +|++|+|++ ++..++.+++++||.|++++ |.|+.+...+...|.++..++ ++.
T Consensus 95 ~~~~g~~~~~~--~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~--------P~y~~~~~~~~~~g~~v~~v~--~~~~ 162 (410)
T PRK06290 95 EKVFGVKDIDP--VTEVIHSIGSKPALAMLPSCFINPGDVTLMTV--------PGYPVTGTHTKYYGGEVYNLP--LLEE 162 (410)
T ss_pred HHHcCCCcCCC--cceEEEccCHHHHHHHHHHHhCCCCCEEEEeC--------CCCccHHHHHHHcCCEEEEEe--cCCC
Confidence 8888754 221 2 599999999 88778899999999999999 555554445566776666665 443
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CC---C
Q 023191 178 STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PF---E 247 (286)
Q Consensus 178 ~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~---~ 247 (286)
.++.+|++++++.+.+ ++|+|+++ |+| +|...+ +++|+++|++|+++||+|+++...... +.... .+ .
T Consensus 163 ~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~-~~~~s~~~~~~~~ 240 (410)
T PRK06290 163 NNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFD-GKPLSFLSVPGAK 240 (410)
T ss_pred cCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeC-CCCcChhcCCCcc
Confidence 3578899999998876 89999998 777 776666 678888899999999999997643221 11111 11 1
Q ss_pred cceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 248 YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 248 ~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
..++++.|++|.++ |.|.|++++++++.+...
T Consensus 241 ~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~ 274 (410)
T PRK06290 241 EVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFA 274 (410)
T ss_pred ccEEEEeechhhcCCchhheEeEEeCHHHHHHHH
Confidence 25688999999874 445599999888776554
No 62
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.88 E-value=1.8e-21 Score=176.33 Aligned_cols=211 Identities=18% Similarity=0.207 Sum_probs=147.3
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcc--hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNE--YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
..|||++-+. .+.+.+.+++.++-. ++.+.+..++.. +.......+++.+++++|++. +.+++|+
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~------~~i~~g~ 75 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVEFGD-----GYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDE------ARVTHGA 75 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHHHhh-----ccccccccccccccccchHHHHHHHHHHHHhCCCc------eEEECCh
Confidence 4677765433 567777777766432 333332222211 111122234577999999975 4456777
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh------cC
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FR 195 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~------~~ 195 (286)
+ ++..++.+++++||.|++..+.|.+.+. .+...|.+++.++..-+ +++.+|++++++.+++ .+
T Consensus 76 ~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~ 146 (370)
T TIGR02539 76 REGKFAVMHALCKEGDWVVLDGLAHYTSYV--------AAERAGLNVKEVPHTGH-PEYKVDPEGYGEVIEEVEDESGKP 146 (370)
T ss_pred HHHHHHHHHHhhCCCCEEEECCcccHHHHH--------HHHHcCCEEEEEecCCc-ccCCcCHHHHHHHHHHhhhccCCC
Confidence 7 8888999999999999998876654421 34566776766663211 3578999999999863 26
Q ss_pred CcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEec
Q 023191 196 PKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (286)
Q Consensus 196 tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~ 272 (286)
+++|+++ +.| +|...|+++|.++|+++|+++++|++|+.|......... ++|+++.|+||+++++.+ |++++++
T Consensus 147 ~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~---~~di~v~s~sK~~~~~g~~G~l~~~~ 223 (370)
T TIGR02539 147 PVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEI---GADFIVGSGHKSMAASGPCGVLGMSE 223 (370)
T ss_pred cEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEECH
Confidence 7888887 555 788999999999999999999999999987543332222 389999999999975444 9999998
Q ss_pred chhhhhcc
Q 023191 273 GVKEINKQ 280 (286)
Q Consensus 273 ~~~~~~~~ 280 (286)
++.+.+++
T Consensus 224 ~~i~~l~~ 231 (370)
T TIGR02539 224 EWEDIVLR 231 (370)
T ss_pred HHHhhhcc
Confidence 88776653
No 63
>PLN03032 serine decarboxylase; Provisional
Probab=99.88 E-value=7.8e-21 Score=170.84 Aligned_cols=203 Identities=15% Similarity=0.103 Sum_probs=147.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc--C
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--K 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--~ 134 (286)
....+++++.+++.+.+ |+|... +.......++|+++++++++++|.++++ ..-++|+|+| +++.++.+.. .
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~-~~~g~~a~~~e~~v~~~ia~llg~~~~~--~~G~fTsGGTEaNl~al~~ar~~~ 109 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIE-SNYGVHSRQFEVGVLDWFARLWELEKDE--YWGYITTCGTEGNLHGILVGREVF 109 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCccc-CCCCccHHHHHHHHHHHHHHHhCCCCcc--CCEEEeCchHHHHHHHHHHHHHhC
Confidence 34456888888776655 444432 2222356789999999999999998754 1138888888 8876665442 3
Q ss_pred CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCcc
Q 023191 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLY 210 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n-~g~~~ 210 (286)
++..|+++..+|.++... +.+.|..++.+| ++ +++.+|+++|++++++. +|.+|+++ .++ +|.+.
T Consensus 110 ~~~~vi~s~~~H~Sv~ka--------a~~lg~~~~~V~--~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id 178 (374)
T PLN03032 110 PDGILYASRESHYSVFKA--------ARMYRMEAVKVP--TL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD 178 (374)
T ss_pred CCcEEEeCCCceeHHHHH--------HHHcCCCCeEee--eC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC
Confidence 556899999888887653 334555555665 44 56899999999999763 36677776 444 88999
Q ss_pred CHHHHHHHHHhcC-----CEEEEeccccccccccCCCCC--CC-CcceEEEeCCCCCCCCCCc-eEEEEecchhh
Q 023191 211 DYERIRKVCNKQK-----AIMLADMAHISGLVAAGVIPS--PF-EYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (286)
Q Consensus 211 ~l~~I~~ia~~~~-----~~vivD~a~~~g~~~~~~~~~--~~-~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (286)
|+++|+++|+++| +|+++|+|++.+.++...... .+ .++|++++|+||+++.|.| |++++|++..+
T Consensus 179 pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~ 253 (374)
T PLN03032 179 DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVK 253 (374)
T ss_pred CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchhhH
Confidence 9999999999996 589999999888776422111 11 2499999999998877999 99999986543
No 64
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.87 E-value=4.6e-21 Score=175.67 Aligned_cols=215 Identities=11% Similarity=0.087 Sum_probs=152.8
Q ss_pred cCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC--CCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~~~~v~~~sG 121 (286)
+.++|+.+++ ++++.+.+++.+.+..... ..|+...+..+|++++++++++++|. ++++ +|++|+|
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~---~I~it~G 110 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGV------QAYTEYRGDADIRELLAARLAAFTGAPVDAAD---ELIITPG 110 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCC------ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---CEEEeCC
Confidence 4578886654 3577888888877644211 12444567789999999999999996 4312 5999999
Q ss_pred hH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc--CCCCCCCCHHHHHHHhhhcCCcE
Q 023191 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL--NESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 122 ~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
++ ++..++.++++|||+|++++| .|+.+...+...|.+++.++++. ..+++.+|+++|++++++ ++++
T Consensus 111 a~~al~~~~~~l~~~Gd~Vlv~~P--------~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~k~ 181 (405)
T PRK06207 111 TQGALFLAVAATVARGDKVAIVQP--------DYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA-GVRV 181 (405)
T ss_pred cHHHHHHHHHHhcCCCCEEEEeCC--------CchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh-cCeE
Confidence 99 888799999999999999994 44444445556776666565431 113578999999999887 8998
Q ss_pred EEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC--CC---cceEEEeCCCCCCC--CCCce
Q 023191 199 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--FE---YADVVTTTTHKSLR--GPRGA 266 (286)
Q Consensus 199 v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~~---~~D~v~~s~~K~l~--gp~gG 266 (286)
|+++ |+| +|...+ +++|+++|++||++||+|+++..-.......... +. ..-+++.|++|.|+ |.+.|
T Consensus 182 v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG 261 (405)
T PRK06207 182 FLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLG 261 (405)
T ss_pred EEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceE
Confidence 8887 777 776665 7788999999999999999965322211111111 11 12278999999875 66679
Q ss_pred EEEEecchhhhhc
Q 023191 267 MIFFRKGVKEINK 279 (286)
Q Consensus 267 ~l~~~~~~~~~~~ 279 (286)
+++.++++.+..+
T Consensus 262 ~ii~~~~l~~~~~ 274 (405)
T PRK06207 262 VAFGSPAIIDRME 274 (405)
T ss_pred EEEcCHHHHHHHH
Confidence 9999887765554
No 65
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.87 E-value=7.9e-21 Score=171.99 Aligned_cols=203 Identities=13% Similarity=0.106 Sum_probs=148.6
Q ss_pred eecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHH
Q 023191 50 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQV 128 (286)
Q Consensus 50 ~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~ 128 (286)
-|+++...+++.+++++.+.... + . ....+..+.+++.+++++|.+++. ..|.++++++ ++..+
T Consensus 8 ~~~pgP~~~~~~~~~a~~~~~~~-~-----------~-~~~~~~~~~~~~~l~~l~~~~~~~--~~i~~~~~gt~~l~~~ 72 (368)
T PRK13479 8 LLTPGPLTTSRTVREAMLRDWGS-W-----------D-DDFNALTASVRAKLVAIATGEEGY--TCVPLQGSGTFSVEAA 72 (368)
T ss_pred eecCCCCCCCHHHHHHhCCCCCC-C-----------C-hHHHHHHHHHHHHHHHHhCCCCCc--eEEEEcCCcHHHHHHH
Confidence 46777778899999998765421 1 0 112345667889999999986533 2466666655 88879
Q ss_pred HHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh-cCCcEEEEc-CCC-
Q 023191 129 YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG-ASA- 205 (286)
Q Consensus 129 l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-~~tk~v~i~-~~n- 205 (286)
+.+++.+||.|++..+.+.+.. ....+...|.+++.++. + +++.+|++++++.+++ .++++|+++ ++|
T Consensus 73 ~~~l~~~~~~vlv~~~~~~~~~------~~~~~~~~g~~~~~i~~--~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 143 (368)
T PRK13479 73 IGSLVPRDGKVLVPDNGAYGAR------IAQIAEYLGIAHVVLDT--G-EDEPPDAAEVEAALAADPRITHVALVHCETT 143 (368)
T ss_pred HHhccCCCCeEEEEeCCchHHH------HHHHHHHcCCcEEEEEC--C-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCc
Confidence 9999999999998873222110 01233456766766664 3 4567999999999875 145677776 555
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+|...|+++|.++|+++++++++|++|+.|..+.++.... +|++++|+|||++||.| |++++++++.+..+
T Consensus 144 tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~---~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~ 215 (368)
T PRK13479 144 TGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELG---IDALISSANKCIEGVPGFGFVIARRSELEACK 215 (368)
T ss_pred cccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccC---ceEEEecCccccccCCCceEEEECHHHHHHhh
Confidence 7788999999999999999999999998887665554444 89999999999999999 99999988765544
No 66
>PRK07682 hypothetical protein; Validated
Probab=99.87 E-value=4.5e-21 Score=174.27 Aligned_cols=216 Identities=14% Similarity=0.088 Sum_probs=152.6
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..+++. +++.+.+++.+.+.... .+ |+...+..++++++.+++.+.+|.+.+. ..+|++|+|++
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~~i~~t~G~~ 91 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-TS------YTANAGLLELRQEIAKYLKKRFAVSYDP-NDEIIVTVGAS 91 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHHhCCCCCC-CCcEEEeCChH
Confidence 367999988884 46677888877654321 12 3444678899999999999887874321 01599999998
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++.+++.++++|||.|+++++.| ..+...+...|..+..++++.+ +++.+|++++++++.+ ++++|+++
T Consensus 92 ~al~~~~~~l~~~gd~vl~~~p~y--------~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~~~ 161 (378)
T PRK07682 92 QALDVAMRAIINPGDEVLIVEPSF--------VSYAPLVTLAGGVPVPVATTLE-NEFKVQPAQIEAAITA-KTKAILLC 161 (378)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCc--------hhhHHHHHHcCCEEEEeecCCc-cCCCCCHHHHHhhcCc-ccEEEEEE
Confidence 88878899999999999999544 4444344556665555543222 3578999999999877 89999887
Q ss_pred -CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCC-C---CCCcceEEEeCCCCCCC--CCCceEEEEe
Q 023191 203 -ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-S---PFEYADVVTTTTHKSLR--GPRGAMIFFR 271 (286)
Q Consensus 203 -~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~---~~~~~D~v~~s~~K~l~--gp~gG~l~~~ 271 (286)
|+| +|...+ +++|+++|++|++++|+|+++........... . ......+++.|++|+|+ |.+-|+++++
T Consensus 162 ~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~ 241 (378)
T PRK07682 162 SPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP 241 (378)
T ss_pred CCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC
Confidence 666 665554 88999999999999999999764332211100 0 01124588999999885 4445999999
Q ss_pred cchhhhhc
Q 023191 272 KGVKEINK 279 (286)
Q Consensus 272 ~~~~~~~~ 279 (286)
+++.+..+
T Consensus 242 ~~~i~~l~ 249 (378)
T PRK07682 242 VYFSEAML 249 (378)
T ss_pred HHHHHHHH
Confidence 88776554
No 67
>PRK09082 methionine aminotransferase; Validated
Probab=99.87 E-value=1.9e-21 Score=177.21 Aligned_cols=236 Identities=11% Similarity=0.105 Sum_probs=166.1
Q ss_pred cccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 023191 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (286)
++..+...++..+.... ...+.++|..|++. +++.+.+++.+.+.... ..|+...+..++++++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~~a~~l~~ 82 (386)
T PRK09082 11 KLPNVGTTIFTVMSALA-AEHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-------NQYPPMTGVAALREAIAAKTAR 82 (386)
T ss_pred HhhccCccHHHHHHHHH-hhCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCcHHHHHHHHHHHHH
Confidence 34445566666665543 23466899887764 46888888887765421 1234456778999999999999
Q ss_pred HCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCC
Q 023191 104 AFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI 182 (286)
Q Consensus 104 ~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 182 (286)
++|.+.+. ..+|++|+|++ ++.+++.++++|||+|+++++.|.++ ...+...|.++..++ .+.+++.+
T Consensus 83 ~~~~~~~~-~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~--------~~~~~~~g~~~~~~~--~~~~~~~~ 151 (386)
T PRK09082 83 LYGRQYDA-DSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSY--------APAIELAGGRAVRVA--LQPPDFRV 151 (386)
T ss_pred HhCCCCCC-CCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhh--------HHHHHHcCCEEEEEe--cCcccccC
Confidence 98885421 01599999998 88778899999999999999555443 334456676665555 44456899
Q ss_pred CHHHHHHHhhhcCCcEEEEc-CCC-CCCc---cCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC--C---CcceEE
Q 023191 183 DYDQLEKSATLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--F---EYADVV 252 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~-~~n-~g~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~---~~~D~v 252 (286)
|++++++.+++ ++++|+++ ++| +|.. .++++|.++|++|++++|+|+++............. + ....++
T Consensus 152 d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~ 230 (386)
T PRK09082 152 DWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFV 230 (386)
T ss_pred CHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEE
Confidence 99999999987 89999997 666 6644 568899999999999999999975433221111111 1 124588
Q ss_pred EeCCCCCCC--CCCceEEEEecchhhhhccC
Q 023191 253 TTTTHKSLR--GPRGAMIFFRKGVKEINKQG 281 (286)
Q Consensus 253 ~~s~~K~l~--gp~gG~l~~~~~~~~~~~~~ 281 (286)
+.|++|.|+ |.|.|++++++++.+..++.
T Consensus 231 ~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~ 261 (386)
T PRK09082 231 VSSFGKTYHVTGWKVGYCVAPAALSAEFRKV 261 (386)
T ss_pred EeechhhccchhhhhhhhhCCHHHHHHHHHH
Confidence 999999884 45569999988877665543
No 68
>PRK07777 aminotransferase; Validated
Probab=99.87 E-value=1.1e-20 Score=172.26 Aligned_cols=235 Identities=10% Similarity=0.093 Sum_probs=161.7
Q ss_pred ccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 023191 27 LEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA 104 (286)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (286)
+..+.+.++..+..... ..+.++|..+.+. .++.+.+++.+.+.... ..|+...+..++++++.+++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~ 77 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV-RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-------NQYPPGPGIPELRAAIAAQRRRR 77 (387)
T ss_pred hhhcCccHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHHH
Confidence 45556666776666543 3467999877653 46667777766654321 12455567789999999999888
Q ss_pred CCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCC
Q 023191 105 FRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (286)
Q Consensus 105 ~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 183 (286)
+|.+.+. ..+|++|+|++ ++.+++.+++++||+|+++.+.|+.+ ...+...|..++.+++.-+..++.+|
T Consensus 78 ~g~~~~~-~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~d 148 (387)
T PRK07777 78 YGLEYDP-DTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSY--------AAVIAMAGAHRVPVPLVPDGRGFALD 148 (387)
T ss_pred hCCCCCC-CCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhh--------HHHHHHCCCEEEEeecCCccCCCcCC
Confidence 8875322 01599999999 88778889999999999999555443 33445566656555543221356799
Q ss_pred HHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccC----CCCCC-CCcceEEE
Q 023191 184 YDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSP-FEYADVVT 253 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~-~~~~D~v~ 253 (286)
++++++.+.+ ++++|+++ ++| +|... ++++|.++|++|++++|+|+++..-..... +.... ..+.++++
T Consensus 149 ~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~ 227 (387)
T PRK07777 149 LDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTI 227 (387)
T ss_pred HHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEE
Confidence 9999999877 89999997 666 66544 488999999999999999999753222111 11001 12367889
Q ss_pred eCCCCCCCCC--CceEEEEecchhhhhc
Q 023191 254 TTTHKSLRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 254 ~s~~K~l~gp--~gG~l~~~~~~~~~~~ 279 (286)
.|++|.|+.| +.|++++++++.+..+
T Consensus 228 ~S~SK~~g~~GlRiG~~~~~~~l~~~~~ 255 (387)
T PRK07777 228 SSAAKTFNVTGWKIGWACGPAPLIAAVR 255 (387)
T ss_pred eechhhccCcCceeEEEecCHHHHHHHH
Confidence 9999988533 4499999887665544
No 69
>PRK07324 transaminase; Validated
Probab=99.87 E-value=1.8e-21 Score=176.58 Aligned_cols=208 Identities=22% Similarity=0.201 Sum_probs=145.0
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..+|+ .+|+.+ +++.+++.+.. .+ |+...+..+|++++++++. +++++ +|++|+|++
T Consensus 27 ~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~-~~------Y~~~~G~~~lr~~ia~~~~---~~~~~----~vi~t~G~~~ 91 (373)
T PRK07324 27 CIDSLTLEELLALAGKNP-EAFYQELGQKK-LT------YGWIEGSPEFKEAVASLYQ---NVKPE----NILQTNGATG 91 (373)
T ss_pred CCCCCcHHHHHhccCcch-HHHHHHHhcCC-cc------CCCCCCCHHHHHHHHHHhc---CCChh----hEEEcCChHH
Confidence 5677877877 356666 77766664421 12 3444566778866655543 35664 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.+++.+++++||+|+++. |.|..+...+...|.+++.++++.+ +++.+|++++++.+++ +||+|+++
T Consensus 92 al~~~~~~l~~~gd~Vl~~~--------P~y~~~~~~~~~~g~~v~~v~~~~~-~~~~~d~~~l~~~~~~-~~kli~i~~ 161 (373)
T PRK07324 92 ANFLVLYALVEPGDHVISVY--------PTYQQLYDIPESLGAEVDYWQLKEE-NGWLPDLDELRRLVRP-NTKLICINN 161 (373)
T ss_pred HHHHHHHHhCCCCCEEEEcC--------CCchhHHHHHHHcCCEEEEEecccc-cCCCCCHHHHHHhCCC-CCcEEEEeC
Confidence 88889999999999999998 4444444345567766666664322 3567999999998887 89999997
Q ss_pred CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCCceEEEEecch
Q 023191 203 ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (286)
Q Consensus 203 ~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l~--gp~gG~l~~~~~~ 274 (286)
|+| +|...+ +++|+++|++||+++|+|+++. +....+..+.... ...+++.|++|+++ |.+-|++++++++
T Consensus 162 p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~l 240 (373)
T PRK07324 162 ANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYR-PLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEV 240 (373)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHH
Confidence 776 777776 8899999999999999999953 3332211111111 13477899999875 5666999998777
Q ss_pred hhhhcc
Q 023191 275 KEINKQ 280 (286)
Q Consensus 275 ~~~~~~ 280 (286)
.+..++
T Consensus 241 i~~~~~ 246 (373)
T PRK07324 241 IDILRK 246 (373)
T ss_pred HHHHHH
Confidence 665554
No 70
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.87 E-value=7.6e-21 Score=171.05 Aligned_cols=209 Identities=12% Similarity=0.079 Sum_probs=149.8
Q ss_pred ceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcce-eEEeCCChH-H
Q 023191 49 LELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGV-NVQSLSGSP-S 124 (286)
Q Consensus 49 i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~-~v~~~sG~~-a 124 (286)
++|..+++ ++++.+.+++.+..... ..|+...+..+|++++.+++.+.+|++.+. . +|++|+|++ +
T Consensus 3 ~~~~~g~p~~~~~~~~~~~~~~~~~~~--------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~Iiit~Gs~~a 72 (350)
T TIGR03537 3 FDFGTGDPKEPTPPFIRKALIDAVPEV--------SQYPSALGTKALREAISGWFERRFGVKLDP--DAQVLPSAGSKEA 72 (350)
T ss_pred EeccCCCCCCCCCHHHHHHHHHHHhcc--------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEcCChHHH
Confidence 56666666 45788889887764321 123445677899999999998888863322 2 599999999 8
Q ss_pred HHHHHHHhcCCC---CeEEeccCCCCcccCccccccccccccceeeeEEEecccC-CCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 125 NFQVYTALLKPH---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 125 ~~~~l~a~~~~G---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+.+++.+++++| |+|++++ |+|+.+...+...|.+++.++ .+ .+++.+|++++++++.+ ++|+++
T Consensus 73 i~~~~~~~~~~g~~~d~Vl~~~--------p~y~~~~~~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~~~~-~~~~i~ 141 (350)
T TIGR03537 73 IFHFPLVFIDPEEDRRRVIFGT--------PGYPVYERGALFAGGEPTAVK--LKKEDGFLLRLEKVEKSILE-ETKIVW 141 (350)
T ss_pred HHHHHHHHcCCCCCCceEEEcC--------CCCcchHHHHHhcCCEEEEcc--cCcccCCccCHHHHHHhhhh-ccEEEE
Confidence 777888899987 6999999 555555556677887665555 43 24577999999999987 899999
Q ss_pred Ec-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC--C-cceEEEeCCCCCCC--CCCceEEEE
Q 023191 201 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF--E-YADVVTTTTHKSLR--GPRGAMIFF 270 (286)
Q Consensus 201 i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~--~-~~D~v~~s~~K~l~--gp~gG~l~~ 270 (286)
++ |+| +|...+ +++|+++|++||+++|+|+++...... ....... . ...+++.|++|+++ |.+.|+++.
T Consensus 142 i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~ 220 (350)
T TIGR03537 142 INYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG-EPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAG 220 (350)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC-CCCCchhhcCcCCEEEEeecccccCCccccceeeec
Confidence 98 666 776666 889999999999999999996532221 1111111 1 13477889999874 445699988
Q ss_pred ecchhhhhc
Q 023191 271 RKGVKEINK 279 (286)
Q Consensus 271 ~~~~~~~~~ 279 (286)
++++.+..+
T Consensus 221 ~~~~~~~~~ 229 (350)
T TIGR03537 221 DEKLISFLR 229 (350)
T ss_pred CHHHHHHHH
Confidence 777665544
No 71
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.87 E-value=9.2e-21 Score=174.81 Aligned_cols=206 Identities=14% Similarity=0.070 Sum_probs=150.1
Q ss_pred cCceecCCCC------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC
Q 023191 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120 (286)
Q Consensus 47 ~~i~L~~~e~------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s 120 (286)
+.|+|..|++ ++++++++++.+++......+ |+...+..++++++.+++.+.+|.+.+. .+|++|+
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~------Y~~~~G~~~lr~aia~~~~~~~~~~~~~--~~v~it~ 124 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNS------YSTCVGLLPARRAIAEYLSRDLPYELST--DDIYLTA 124 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCC------CCCCccCHHHHHHHHHHHhhccCCCCCh--hhEEEeC
Confidence 6799998876 247899999988876522112 3445678899999999988777664332 3699999
Q ss_pred ChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEE
Q 023191 121 GSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (286)
Q Consensus 121 G~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v 199 (286)
|++ ++.+++.++++|||+|++++ |.|+.|...+.+.|.+++.+++..+ +++.+|++++++++++ +++++
T Consensus 125 G~~~al~l~~~~l~~~Gd~Vlv~~--------P~y~~y~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~i 194 (430)
T PLN00145 125 GCAQAIEIIMSVLAQPGANILLPR--------PGYPLYEARAVFSGLEVRHFDLLPE-RGWEVDLEGVEALADE-NTVAM 194 (430)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEcC--------CCCccHHHHHHHcCCEEEEeeCCcc-cCCcCCHHHHHHHhCc-CceEE
Confidence 999 88878899999999999999 5555444445566766666654322 4689999999999887 88988
Q ss_pred EEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC---Cc--ceEEEeCCCCCC--CCCCceE
Q 023191 200 VAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EY--ADVVTTTTHKSL--RGPRGAM 267 (286)
Q Consensus 200 ~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~~--~D~v~~s~~K~l--~gp~gG~ 267 (286)
+++ |+| +|...+ +++|+++|+++|++||+|+++.. ....+....++ .. .-+++.|++|.| .|+|-|+
T Consensus 195 ~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~ 273 (430)
T PLN00145 195 VIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDH-LTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGW 273 (430)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchh-hccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEE
Confidence 887 766 776666 77889999999999999999643 22222111111 11 237799999985 5666799
Q ss_pred EEEe
Q 023191 268 IFFR 271 (286)
Q Consensus 268 l~~~ 271 (286)
++..
T Consensus 274 iv~~ 277 (430)
T PLN00145 274 IATC 277 (430)
T ss_pred EEEe
Confidence 9974
No 72
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.87 E-value=1.1e-20 Score=172.47 Aligned_cols=242 Identities=15% Similarity=0.108 Sum_probs=165.2
Q ss_pred chhhccccccccChHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHH
Q 023191 19 WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (286)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (286)
+.+.|++++..........+.+......+.++|..++++ +++.+.+++.+.+.... ..|.+..+.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ 75 (391)
T PRK07309 3 LTKRFNKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQ-------SHYTGMAGLLELRQA 75 (391)
T ss_pred hhhHHHhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHH
Confidence 345555566555555555555433222567899888774 47778888887665321 124445667899999
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
+++++...+|+..+. ..+|++|+|++ ++.+++.+++++||+|++++|.|.++ ...++..|.++..++ .
T Consensus 76 ia~~~~~~~~~~~~~-~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~--------~~~~~~~g~~~~~~~--~ 144 (391)
T PRK07309 76 AADFVKEKYNLDYAP-ENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGY--------EPIVNLVGAEIVEID--T 144 (391)
T ss_pred HHHHHHHHhCCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcch--------HHHHHHcCCEEEEEe--c
Confidence 999998887763210 02599999998 88778899999999999999555544 334456676665554 4
Q ss_pred CCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-
Q 023191 176 NESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE- 247 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~--~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~- 247 (286)
+.+++.+|++++++++++ .++++|+++ |+| +|... ++++|+++|++|++++|+|+++..-....... .++.
T Consensus 145 ~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~-~~~~~ 223 (391)
T PRK07309 145 TENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH-VSIAE 223 (391)
T ss_pred CCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCC-CCHHH
Confidence 434578999999998864 258899987 777 67554 48889999999999999999965322211111 1111
Q ss_pred ---cceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 248 ---YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 248 ---~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
...+++.|++|.|+ |.+.|++++++++.+..+
T Consensus 224 ~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~ 260 (391)
T PRK07309 224 YLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLI 260 (391)
T ss_pred hccCCEEEEecChhhccCccceeEEEEeCHHHHHHHH
Confidence 13378999999874 445599999988765554
No 73
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.87 E-value=1.2e-20 Score=172.45 Aligned_cols=209 Identities=13% Similarity=0.108 Sum_probs=142.6
Q ss_pred ceecCCCC-C-CCHHHHHHhccccccCCCCCCCCCcccCC--cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChH
Q 023191 49 LELIPSEN-F-TSVSVMQAVGSVMTNKYSEGYPGARYYGG--NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSP 123 (286)
Q Consensus 49 i~L~~~e~-~-~~~~v~~a~~~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~ 123 (286)
++|..+++ . +|+.+.+++.+. ... .+|.. +.. ..+..++++++++++++++|++.+. +.+++ |++
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~--~~~-~~~~~---~~~~~~~g~~~~~~~~~~~la~~~g~~~~~----v~~~~~g~~ 92 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN--EFY-TAYTP---YQPEISQGRLQALFELQTMLCELTGMDVAN----ASLQDEATA 92 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc--cCc-ccCCC---CChhhhhhHHHHHHHHHHHHHHHHCCCccc----eeccCchHH
Confidence 67777766 3 345554445554 111 12211 111 4667799999999999999987643 54544 555
Q ss_pred -HHHHHHHHhcCC--CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 124 -SNFQVYTALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 124 -a~~~~l~a~~~~--Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
++.+++.+++.+ ||+|+++++.|+++...+..... ..|.+++.++ .+ +++.+|++++++.+.+ +|++|+
T Consensus 93 ~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~----~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~t~~vi 164 (398)
T cd00613 93 AAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGE----PLGIEVVEVP--SD-EGGTVDLEALKEEVSE-EVAALM 164 (398)
T ss_pred HHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcc----cCCcEEEEec--cC-CCCCcCHHHHHHhcCC-CeEEEE
Confidence 555455666776 99999999888887543321111 1124555555 33 4568999999999987 899999
Q ss_pred Ec-CCCCCCccCH-HHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCC-----CCCCceEEEEecc
Q 023191 201 AG-ASAYARLYDY-ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL-----RGPRGAMIFFRKG 273 (286)
Q Consensus 201 i~-~~n~g~~~~l-~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l-----~gp~gG~l~~~~~ 273 (286)
++ ++.+|...++ ++|.++|++||+++|+|++|+.+......... ++|++++|+|||+ +||++|+++++++
T Consensus 165 v~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~---~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~ 241 (398)
T cd00613 165 VQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEY---GADIVVGNLQKTGVPHGGGGPGAGFFAVKKE 241 (398)
T ss_pred EECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHc---CCCEEEeeccccCCCCCCCCCceeEEEEhhh
Confidence 97 4446777775 99999999999999999998766533222222 4899999999998 2456699999887
Q ss_pred hhhhh
Q 023191 274 VKEIN 278 (286)
Q Consensus 274 ~~~~~ 278 (286)
+.+..
T Consensus 242 ~~~~~ 246 (398)
T cd00613 242 LVRFL 246 (398)
T ss_pred hHhhC
Confidence 76653
No 74
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.5e-20 Score=170.89 Aligned_cols=228 Identities=14% Similarity=0.089 Sum_probs=154.3
Q ss_pred cccChHHHHHHHHHHHHH---HcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHH
Q 023191 28 EVVDPEIADIIEHEKARQ---WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (286)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~---~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 102 (286)
..+++..+..+.....+. .+.|+|..+++ ++++.+.+++.+.+...... .|+...+..+++ +.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~lr----~~ia 76 (380)
T PRK06225 7 AKVPPSGFKTSNEFFDYVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYC------KYPPPEGFPELR----ELIL 76 (380)
T ss_pred cccCcchhhhHHHHHHHHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCC------CCCCCcchHHHH----HHHH
Confidence 345555555555533222 46788988877 46889999998887642211 133344555565 6777
Q ss_pred HHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCC
Q 023191 103 EAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY 181 (286)
Q Consensus 103 ~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 181 (286)
+++|++++ +|++++|++ ++..++.+++.+||+|+++++.| ..+...+...|..++.+++..+.+++.
T Consensus 77 ~~l~~~~~----~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y--------~~~~~~~~~~g~~~~~v~~~~~~~~~~ 144 (380)
T PRK06225 77 KDLGLDDD----EALITAGATESLYLVMRAFLSPGDNAVTPDPGY--------LIIDNFASRFGAEVIEVPIYSEECNYK 144 (380)
T ss_pred HhcCCCCC----cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC--------cchHHHHHHhCceEEeeccccccCCcc
Confidence 78898775 599999999 87778889999999999999444 333333455676665555432223578
Q ss_pred CCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEEeC
Q 023191 182 IDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTT 255 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~~s 255 (286)
+|++++++.+++ ++++|+++ |+| +|... ++++|.++|+++|+++|+|+++. ...........+. ...+++.|
T Consensus 145 ~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~i~~~s 222 (380)
T PRK06225 145 LTPELVKENMDE-NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR-DFAREHTLAAEYAPEHTVTSYS 222 (380)
T ss_pred CCHHHHHhhcCC-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH-HHhccCCchhhcCCCCEEEEee
Confidence 999999999987 89999886 666 66544 48899999999999999999953 1111100000111 24577889
Q ss_pred CCCCCC--CCCceEEEEecchhhhhc
Q 023191 256 THKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 256 ~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
++|+|+ |.+.|++++++++.+..+
T Consensus 223 ~SK~~g~~G~RiG~i~~~~~l~~~~~ 248 (380)
T PRK06225 223 FSKIFGMAGLRIGAVVATPDLIEVVK 248 (380)
T ss_pred chhhcCCccceeEEEecCHHHHHHHH
Confidence 999884 334599999887766544
No 75
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.86 E-value=2.2e-20 Score=170.63 Aligned_cols=228 Identities=14% Similarity=0.103 Sum_probs=158.6
Q ss_pred cChHHHHHHHHHHHHH-----HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHH
Q 023191 30 VDPEIADIIEHEKARQ-----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (286)
Q Consensus 30 ~~~~~~~~~~~~~~~~-----~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 102 (286)
.+.+.+..+....... .+.++|..|+++ +|+.+++++.+.+... ..|+...+..++++++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~--------~~Y~~~~G~~~lr~aia~~~~ 78 (393)
T TIGR03538 7 LQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHGL--------STYPTTKGLPELRQAIARWLE 78 (393)
T ss_pred CCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhcc--------CCCCCCCCCHHHHHHHHHHHH
Confidence 3444455454444322 467899988884 6888888888765321 113445677899999999998
Q ss_pred HHCCCC----CCCcceeEEeCCChH-HHHHHHHHhcCCCCe--EEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 103 EAFRLD----PEKWGVNVQSLSGSP-SNFQVYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 103 ~~~g~~----~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
+.+|.+ +++ +|++|+|++ ++..++.++++|||. |++++ |+|..|...+...|.+++.++ +
T Consensus 79 ~~~~~~~~~~~~~---~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~--------P~y~~~~~~~~~~g~~~~~v~--~ 145 (393)
T TIGR03538 79 RRFDLPTGVDPER---HVLPVNGTREALFAFAQAVINPGQAPLVVMPN--------PFYQIYEGAALLAGAEPYFLN--C 145 (393)
T ss_pred HhhCCcccCCCCc---eEEECCCcHHHHHHHHHHHcCCCCcceEEecC--------CCCcchHHHHHhcCCeEEEee--c
Confidence 887754 322 599999999 888788999999996 88888 555555545566776666565 4
Q ss_pred CC-CCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccC-CCCCC---
Q 023191 176 NE-STGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSP--- 245 (286)
Q Consensus 176 ~~-~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~--- 245 (286)
+. +++.+|++++++++.+ ++|+|+++ |+| +|...+ +++|+++|++|+++||+|+++..-..... .....
T Consensus 146 ~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 224 (393)
T TIGR03538 146 TAENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQA 224 (393)
T ss_pred cccCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHh
Confidence 32 3478999999998877 89999997 777 776555 78889999999999999999653221111 01000
Q ss_pred ---C---C-cceEEEeCCCCCC--CCCCceEEEEecchhhhhc
Q 023191 246 ---F---E-YADVVTTTTHKSL--RGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 246 ---~---~-~~D~v~~s~~K~l--~gp~gG~l~~~~~~~~~~~ 279 (286)
. . ..-+++.|++|.| .|.+-|++++++++.+...
T Consensus 225 ~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~ 267 (393)
T TIGR03538 225 AAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFL 267 (393)
T ss_pred cccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHH
Confidence 0 0 0227799999964 5666699999887665443
No 76
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.1e-20 Score=163.34 Aligned_cols=206 Identities=18% Similarity=0.128 Sum_probs=154.7
Q ss_pred cCceecCCCC------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC--CCCCcceeEEe
Q 023191 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQS 118 (286)
Q Consensus 47 ~~i~L~~~e~------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~~~~v~~ 118 (286)
..|.|..|++ .+++++.+|+.+++.....++| +++.+....|+++.+++.+-... +++ +|++
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Y------aps~G~~~AR~AVAeYl~~~l~~kl~a~----DV~l 131 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGY------APSVGILPARRAVAEYLNRDLPNKLTAD----DVVL 131 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCc------CCccccHHHHHHHHHHhhcCCCCccCcC----ceEE
Confidence 4578888776 3689999999999987554444 55577777777777765544433 444 4999
Q ss_pred CCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCc
Q 023191 119 LSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (286)
Q Consensus 119 ~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk 197 (286)
|+|.+ |+..++.++.+||..||++. |+|+.|..-+...|.+++...+ +.+++|++|++.+|+++++ ||.
T Consensus 132 tsGC~qAIe~~i~~LA~p~aNILlPr--------PGfp~Y~~~a~~~~lEVR~ydl-LPe~~weIDL~~veal~DE-NT~ 201 (447)
T KOG0259|consen 132 TSGCSQAIELAISSLANPGANILLPR--------PGFPLYDTRAIYSGLEVRYYDL-LPEKDWEIDLDGVEALADE-NTV 201 (447)
T ss_pred eccchHHHHHHHHHhcCCCCceecCC--------CCCchHHHhhhhcCceeEeecc-cCcccceechHHHHHhhcc-Cee
Confidence 99999 99889999999999999999 8888888777788877766654 3446899999999999998 998
Q ss_pred EEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-c---ce-EEEeCCCCCC--CCCCc
Q 023191 198 LIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-Y---AD-VVTTTTHKSL--RGPRG 265 (286)
Q Consensus 198 ~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~---~D-~v~~s~~K~l--~gp~g 265 (286)
++++. |+| .|.+. -+++|+++|++++++||.|+.+..-.+. +..-.++. . +- +.+++.+|-+ .|||-
T Consensus 202 AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg-~~pfvpmg~fssiVPVitlggisKrW~VPGWRl 280 (447)
T KOG0259|consen 202 AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFG-DKPFVPMGKFSSIVPVITLGGISKRWIVPGWRL 280 (447)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecC-CCCccchhhccccCceEeecccccccccCCcee
Confidence 87775 777 66444 4889999999999999999995433322 22111221 1 22 4577888944 88899
Q ss_pred eEEEEecc
Q 023191 266 AMIFFRKG 273 (286)
Q Consensus 266 G~l~~~~~ 273 (286)
|++..++.
T Consensus 281 GWi~~hD~ 288 (447)
T KOG0259|consen 281 GWIALHDP 288 (447)
T ss_pred eeEEEecc
Confidence 99999874
No 77
>PLN02231 alanine transaminase
Probab=99.86 E-value=1.6e-20 Score=176.74 Aligned_cols=235 Identities=12% Similarity=0.082 Sum_probs=161.9
Q ss_pred cccChHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC
Q 023191 28 EVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL 107 (286)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~ 107 (286)
.+.++..++.+.... ...+.|+|.++.+..|..+++.+.+.+.+.. + .....|+...+..++++++.+++.+..|.
T Consensus 112 ~~~~~~~~r~v~~~~-~~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~--~-~~~~~Y~~s~G~~~lReaIA~~~~~r~g~ 187 (534)
T PLN02231 112 GQQPITFFREVLALC-DHPSLLDKSETHGLFSADAIERAWQILDQIP--G-RATGAYSHSQGIKGLRDAIAAGIEARDGF 187 (534)
T ss_pred CCCccHHHHHHHHhc-cCCccCCCCCccccCCHHHHHHHHHHHHhcC--C-ccccCcCCCCCcHHHHHHHHHHHHhccCC
Confidence 445666666665542 3346788887776667777777777665421 1 01223677789999999999999988776
Q ss_pred CCCCcceeEEeCCChH-HHHHHHHHhc-CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CCCCCCH
Q 023191 108 DPEKWGVNVQSLSGSP-SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDY 184 (286)
Q Consensus 108 ~~~~~~~~v~~~sG~~-a~~~~l~a~~-~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~ 184 (286)
+.+. .+|++|+|++ ++..++++++ .+||.|+++. |.|+.|...+...|..++.++ ++. ++|.+|+
T Consensus 188 ~~~p--e~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~--------P~Y~~y~~~~~~~g~~~v~~~--l~~~~~~~~d~ 255 (534)
T PLN02231 188 PADP--NDIFLTDGASPAVHMMMQLLIRSEKDGILCPI--------PQYPLYSASIALHGGTLVPYY--LDEATGWGLEI 255 (534)
T ss_pred CCCc--ccEEEeCCHHHHHHHHHHHhccCCCCEEEEeC--------CCChhHHHHHHHcCCEEEEEe--cCcccCCCCCH
Confidence 4332 4699999999 8887888888 4899999999 666655556667776665555 443 3579999
Q ss_pred HHHHHHhhhc-----CCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccC-CCCC--------C
Q 023191 185 DQLEKSATLF-----RPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPS--------P 245 (286)
Q Consensus 185 e~l~~~i~~~-----~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~--------~ 245 (286)
++|++.+++. ++|+++++ |+| +|.+. .+++|+++|++||++||+|+++..-....+ .... +
T Consensus 256 ~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g 335 (534)
T PLN02231 256 SELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMG 335 (534)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhc
Confidence 9999988652 57887776 777 77555 477889999999999999999653222111 1111 0
Q ss_pred CC--cc-eEEEeCCCCCC---CCCCceEEEE---ecchhhhh
Q 023191 246 FE--YA-DVVTTTTHKSL---RGPRGAMIFF---RKGVKEIN 278 (286)
Q Consensus 246 ~~--~~-D~v~~s~~K~l---~gp~gG~l~~---~~~~~~~~ 278 (286)
.. .. -+.+.|++|.+ +|.++|++.+ ++++.+..
T Consensus 336 ~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l 377 (534)
T PLN02231 336 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQI 377 (534)
T ss_pred cccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHH
Confidence 00 11 25578999965 4888899976 45555543
No 78
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.86 E-value=1.3e-20 Score=163.70 Aligned_cols=207 Identities=20% Similarity=0.220 Sum_probs=149.9
Q ss_pred cCceecCCC--CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSE--NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e--~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.+.|-..+ .++||+|++|+.+.+.+.- .||+. ..+++-+++.+|.++.++.+..+ ..|+++.|.-
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhGv-fGY~~--------~~~~~~~ai~~w~~~r~~~~i~~--e~i~~~p~VVp 94 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHGV-FGYPY--------GSDELYAAIAHWFKQRHQWEIKP--EWIVFVPGVVP 94 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcCC-CCCCC--------CCHHHHHHHHHHHHHhcCCCCCc--ceEEEcCcchH
Confidence 345554333 3579999999999987741 15542 23457778889999999985433 3499999988
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..+++++.+|||.|++..|.|+.+ ...+...|.++...|+..+...+.+|+++|++.+.+.++|++++|
T Consensus 95 gi~~~I~~~T~~gd~Vvi~tPvY~PF--------~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCn 166 (388)
T COG1168 95 GISLAIRALTKPGDGVVIQTPVYPPF--------YNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCN 166 (388)
T ss_pred hHHHHHHHhCcCCCeeEecCCCchHH--------HHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeC
Confidence 88779999999999999999544444 335667787777777655544568899999999988678999998
Q ss_pred CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC---C--cce--EEEeCCCCCC--CCCCceEEE
Q 023191 203 ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E--YAD--VVTTTTHKSL--RGPRGAMIF 269 (286)
Q Consensus 203 ~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~--~~D--~v~~s~~K~l--~gp~gG~l~ 269 (286)
|+| +|+++ ++.+|.+||++||+.||+|+.|+- .+..+....++ . .+| +++.|++|+| .|-+.+.++
T Consensus 167 PHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaD-lv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~I 245 (388)
T COG1168 167 PHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHAD-LVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYII 245 (388)
T ss_pred CCCCCCccccHHHHHHHHHHHHHcCCEEEeeccccc-ccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEE
Confidence 888 77554 688999999999999999999863 33333211121 1 244 6788899988 455556666
Q ss_pred Eecc
Q 023191 270 FRKG 273 (286)
Q Consensus 270 ~~~~ 273 (286)
+.++
T Consensus 246 i~n~ 249 (388)
T COG1168 246 ISNR 249 (388)
T ss_pred ecCH
Confidence 6553
No 79
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.86 E-value=1.2e-20 Score=172.17 Aligned_cols=210 Identities=19% Similarity=0.224 Sum_probs=148.7
Q ss_pred HcCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 46 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 46 ~~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
++.|+|..++. .++|++++++.+++.. +..+|++.++..+. ..+..++++.+++++|.+. .+++++|+
T Consensus 38 ~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~---~~~~~~le~~ia~~~g~~~-----~ii~~~~~ 108 (393)
T TIGR01822 38 REVLNFCANNYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGT---QDIHKELEAKIAAFLGTED-----TILYASCF 108 (393)
T ss_pred ceEEEeeCCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCC---hHHHHHHHHHHHHHhCCCc-----EEEECchH
Confidence 35688888874 3588999999998865 32355555544332 2333445588889999753 36665555
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh---c--CCc
Q 023191 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---F--RPK 197 (286)
Q Consensus 123 ~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~---~--~tk 197 (286)
.++..++.+++++||+|++.++.|+++.. .+...+... +.+ ..+|++++++.+++ . +|+
T Consensus 109 ~a~~~~~~~l~~~gd~vi~~~~~~~s~~~--------~~~~~~~~~--~~~------~~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 109 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKAKR--YRY------ANNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred HHHHHHHHHhCCCCCEEEEeccccHHHHH--------HHHhcCCce--EEe------CCCCHHHHHHHHHhhhhcCCCce
Confidence 57777889999999999999988777643 223333222 211 13789999998874 2 577
Q ss_pred EEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC----CCCC-CcceEEEeCCCCCCCCCCceEEEE
Q 023191 198 LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPF-EYADVVTTTTHKSLRGPRGAMIFF 270 (286)
Q Consensus 198 ~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~-~~~D~v~~s~~K~l~gp~gG~l~~ 270 (286)
+|+++ ..| +|...|+++|+++|++||+++|+|++|+.|....... ...+ ..+|++++|+||+++|+++|++++
T Consensus 173 ~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~ 252 (393)
T TIGR01822 173 LIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTA 252 (393)
T ss_pred EEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEe
Confidence 77776 444 7888999999999999999999999998776532110 0111 148999999999999999999999
Q ss_pred ecchhhhhcc
Q 023191 271 RKGVKEINKQ 280 (286)
Q Consensus 271 ~~~~~~~~~~ 280 (286)
++++.+..++
T Consensus 253 ~~~~~~~l~~ 262 (393)
T TIGR01822 253 RKEVVELLRQ 262 (393)
T ss_pred CHHHHHHHHH
Confidence 9887776553
No 80
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=2.6e-21 Score=169.99 Aligned_cols=167 Identities=22% Similarity=0.222 Sum_probs=124.8
Q ss_pred HHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 95 ~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
+++++.+++++|.+. .+++++|++ ++.+++.++++|||+|+++++.|.++.. .+...|..++.++.
T Consensus 62 ~~~~~~~A~~~ga~~-----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~--------~~~~~g~~~~~v~~ 128 (294)
T cd00615 62 KEAQELAARAFGAKH-----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN--------GLVLSGAVPVYLKP 128 (294)
T ss_pred HHHHHHHHHHhCCCC-----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH--------HHHHCCCEEEEecC
Confidence 345588889999764 366688988 8888899999999999999988777654 23356666665654
Q ss_pred ccCCC---CCCCCHHHHHHHhhh-cCCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC-C-
Q 023191 174 RLNES---TGYIDYDQLEKSATL-FRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-F- 246 (286)
Q Consensus 174 ~~~~~---~~~~d~e~l~~~i~~-~~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-~- 246 (286)
..+.+ .+.+|++++++.+++ .++++|+++.+| +|...|+++|+++|+++|+++++|+||+.+....+..+.. .
T Consensus 129 ~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~ 208 (294)
T cd00615 129 ERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAM 208 (294)
T ss_pred ccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhh
Confidence 33311 137899999999975 368999988445 7888999999999999999999999988654322211111 1
Q ss_pred CcceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 247 EYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 247 ~~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
.++|+++.|+||+++|+++ |++.++++.
T Consensus 209 ~~~div~~S~hK~l~g~~~~~~l~~~~~~ 237 (294)
T cd00615 209 AGADIVVQSTHKTLPALTQGSMIHVKGDL 237 (294)
T ss_pred cCCcEEEEchhcccchHhHHHHHHhCCCc
Confidence 1599999999999999876 888787663
No 81
>PLN02187 rooty/superroot1
Probab=99.86 E-value=2.9e-20 Score=172.82 Aligned_cols=208 Identities=13% Similarity=0.094 Sum_probs=149.3
Q ss_pred HcCceecCCCCC------CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC
Q 023191 46 WKGLELIPSENF------TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (286)
Q Consensus 46 ~~~i~L~~~e~~------~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~ 119 (286)
++.++|..|++. +++++.+++.+.+..... ..|+...+..++++++.+++.+.++.+.+. .+|++|
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~--~~I~it 137 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKG------NSYGPGAGILPARRAVADYMNRDLPHKLTP--EDIFLT 137 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCChHHHHHHHHHHHHHhcCCCCCc--ccEEEe
Confidence 367889888652 467888988887754211 124556778899999999998877653322 369999
Q ss_pred CChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
+|++ ++..++.++++|||+|++++ |.|+.|...+...|.+++.+++. ..+++.+|++++++++++ ++++
T Consensus 138 ~G~~~al~~~~~~l~~pGd~Vlv~~--------P~y~~y~~~~~~~g~~~~~~~l~-~~~~~~~d~~~l~~~~~~-~~~~ 207 (462)
T PLN02187 138 AGCNQGIEIVFESLARPNANILLPR--------PGFPHYDARAAYSGLEVRKFDLL-PEKEWEIDLEGIEAIADE-NTVA 207 (462)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeC--------CCCccHHHHHHHcCCEEEEEeCc-cccCCccCHHHHHHhcCC-CcEE
Confidence 9999 88879999999999999999 55554444556777777666643 224689999999999877 8888
Q ss_pred EEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC---c--ceEEEeCCCCCC--CCCCce
Q 023191 199 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE---Y--ADVVTTTTHKSL--RGPRGA 266 (286)
Q Consensus 199 v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~---~--~D~v~~s~~K~l--~gp~gG 266 (286)
++++ |+| +|...+ +++|+++|++|+++||+|+++.. ....+....++. . .-+++.|++|.| .|.|-|
T Consensus 208 v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~-l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG 286 (462)
T PLN02187 208 MVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDR-TIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIG 286 (462)
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccc-cccCCCCceeHHHhccCCcEEEEecchhhcCCccceeE
Confidence 8887 777 776655 78889999999999999999643 222111111111 1 136789999986 455669
Q ss_pred EEEEec
Q 023191 267 MIFFRK 272 (286)
Q Consensus 267 ~l~~~~ 272 (286)
++++.+
T Consensus 287 ~~v~~~ 292 (462)
T PLN02187 287 WIALND 292 (462)
T ss_pred EEEecC
Confidence 999853
No 82
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.85 E-value=8.7e-21 Score=173.97 Aligned_cols=210 Identities=13% Similarity=0.083 Sum_probs=141.1
Q ss_pred Cceec-CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 48 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 48 ~i~L~-~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
.+.|+ .+-.++|+.+.+++.+++.. +..+....+ +.+......+.+..++ + +++|++++ +|++++|++ ++
T Consensus 28 ~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~l~g~~~~----~v~~~~~~t~~l 99 (406)
T TIGR01814 28 VIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGH-NTGKAPWFTLDESLLK-L-RLVGAKED----EVVVMNTLTINL 99 (406)
T ss_pred cEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccC-ccCCCChhhhhhhhcc-c-cccCCCCC----cEEEeCCchHHH
Confidence 46776 44446789999999877654 211111111 1111111223333333 4 78999775 499999988 66
Q ss_pred HHHHHHhcCCCC---eEEeccCCCCcccCccccccccccccceeeeE--EEecccCCCCCCCCHHHHHHHhh--hcCCcE
Q 023191 126 FQVYTALLKPHD---RIMALDLPHGGHLSHGYQTDTKKISAVSIFFE--TMPYRLNESTGYIDYDQLEKSAT--LFRPKL 198 (286)
Q Consensus 126 ~~~l~a~~~~Gd---~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~~~~d~e~l~~~i~--~~~tk~ 198 (286)
..++.+++++|+ .|++.+.+|++...++.. .+...|.+++ .+.++.+ +++.+|++++++.++ ..+|++
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~----~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~l 174 (406)
T TIGR01814 100 HLLLASFYKPTPKRYKILLEAKAFPSDHYAIES----QLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIAV 174 (406)
T ss_pred HHHHHHhcCCcCCccEEEecCCCCChHHHHHHH----HHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeEE
Confidence 657788776653 677777888875443321 1122343331 1222233 356789999998875 127899
Q ss_pred EEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEEEEecc
Q 023191 199 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (286)
Q Consensus 199 v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (286)
|+++ .+| +|...|+++|.++|+++|+++++|++|++|.++.++.... +|++++|+||||+||+||+++++++
T Consensus 175 v~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~g---vD~~~~s~hK~l~g~pG~~l~v~~~ 248 (406)
T TIGR01814 175 ILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWG---VDFACWCTYKYLNAGPGAGAFVHEK 248 (406)
T ss_pred EEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCC---CCEEEEcCccccCCCCCeEEEEehh
Confidence 9887 444 7899999999999999999999999999999988776655 9999999999998766766666554
No 83
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.85 E-value=4.1e-20 Score=169.59 Aligned_cols=207 Identities=13% Similarity=0.053 Sum_probs=147.7
Q ss_pred HcCceecCCCC------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC
Q 023191 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (286)
Q Consensus 46 ~~~i~L~~~e~------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~ 119 (286)
.+.|+|..|++ ++|+.+++++.+.+..... ..|+...+..++++++.+++.+.+|.+.+. .+|++|
T Consensus 32 ~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~I~it 103 (409)
T PLN00143 32 RLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKF------NSYAPTGGILPARRAIADYLSNDLPYQLSP--DDVYLT 103 (409)
T ss_pred CceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCC------CCCCCCCCCHHHHHHHHHHHHhhcCCCCCH--hhEEEe
Confidence 46789988776 4688888998887754211 114445677889999999998877653322 369999
Q ss_pred CChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
+|++ ++..++.++++|||.|++++ |.|+.+...+...|.++..+++. +.+++.+|++++++++.+ ++++
T Consensus 104 ~G~~~al~~~~~~l~~~gd~v~v~~--------P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~-~~~~ 173 (409)
T PLN00143 104 LGCKHAAEIIIKVLARPEANILLPR--------PGFPDVETYAIFHHLEIRHFDLL-PEKGWEVDLDAVEAIADE-NTIA 173 (409)
T ss_pred cChHHHHHHHHHHHcCCCCEEEEcC--------CCCcCHHHHHHHcCCEEEEEecc-CCCCCcCCHHHHHHhccc-CCEE
Confidence 9999 88879999999999999999 55544444455677666556542 224578999999998876 7888
Q ss_pred EEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC---CCc--ceEEEeCCCCCC--CCCCce
Q 023191 199 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FEY--ADVVTTTTHKSL--RGPRGA 266 (286)
Q Consensus 199 v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~---~~~--~D~v~~s~~K~l--~gp~gG 266 (286)
++++ |+| +|...+ +++|+++|++|++++|+|+++. .....+....+ +.. .-+++.|++|.| .|.+-|
T Consensus 174 ~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG 252 (409)
T PLN00143 174 MVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYG-HIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLG 252 (409)
T ss_pred EEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcccc-ccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceE
Confidence 8886 777 776665 7788899999999999999964 32222211111 111 236789999985 555669
Q ss_pred EEEEe
Q 023191 267 MIFFR 271 (286)
Q Consensus 267 ~l~~~ 271 (286)
++++.
T Consensus 253 ~~v~~ 257 (409)
T PLN00143 253 WLVTC 257 (409)
T ss_pred EEEee
Confidence 99984
No 84
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.85 E-value=4e-20 Score=169.51 Aligned_cols=198 Identities=9% Similarity=0.010 Sum_probs=143.1
Q ss_pred CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC-C-CCcceeEEeCCChH-HHHHHHHHh
Q 023191 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-P-EKWGVNVQSLSGSP-SNFQVYTAL 132 (286)
Q Consensus 56 ~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-~-~~~~~~v~~~sG~~-a~~~~l~a~ 132 (286)
.++.+++.+++...+...+ +++.. . ....++++.+++++++++|++ + ++ .-..+|+|++ ++..++.+.
T Consensus 51 t~~~p~~~~~~~~~l~~~~--~np~s---~--~~~~~le~~~~~~la~llg~~~~~~~--~~g~~TsGgTEAn~~al~~a 121 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNM--IDKDE---Y--PQTAEIENRCVNMLADLWHAPAKDAE--AVGTSTIGSSEAIMLGGLAM 121 (431)
T ss_pred CCCCHHHHHHHHHHHhcCC--CCccc---C--ccHHHHHHHHHHHHHHHhCCCCCCCC--CeEEEechHHHHHHHHHHHH
Confidence 3567788899888886433 33322 1 223489999999999999997 3 33 1233478888 777666543
Q ss_pred c--------CCC-----CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEE
Q 023191 133 L--------KPH-----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (286)
Q Consensus 133 ~--------~~G-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v 199 (286)
. +.| -.|++++.+|.++... +...|.+++.+| ++++++.+|+++|++++++ +|.+|
T Consensus 122 r~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka--------~~~lg~~v~~i~--~d~~~~~vd~~~L~~~i~~-~t~lV 190 (431)
T TIGR01788 122 KWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKF--------ARYFDVELREVP--MDPGRYVIDPEQVVEAVDE-NTIGV 190 (431)
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHH--------HHHcCceeEEEe--cCCCceeeCHHHHHHHHhh-CCeEE
Confidence 2 112 3688888888877542 334565566665 5533468999999999988 88888
Q ss_pred EEc-CCC-CCCccCHHHHHHHHHhc------CCEEEEeccccccccccCCC--CC--CCCcceEEEeCCCCCCCCCCc-e
Q 023191 200 VAG-ASA-YARLYDYERIRKVCNKQ------KAIMLADMAHISGLVAAGVI--PS--PFEYADVVTTTTHKSLRGPRG-A 266 (286)
Q Consensus 200 ~i~-~~n-~g~~~~l~~I~~ia~~~------~~~vivD~a~~~g~~~~~~~--~~--~~~~~D~v~~s~~K~l~gp~g-G 266 (286)
+++ .+| +|.+.|+++|+++|+++ ++++++|+||+.+..+.... +. ...++|++++|+|||+.||.| |
T Consensus 191 ~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G 270 (431)
T TIGR01788 191 VCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVG 270 (431)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcE
Confidence 887 444 88999999999999999 99999999998665432211 11 123699999999999889999 9
Q ss_pred EEEEecc
Q 023191 267 MIFFRKG 273 (286)
Q Consensus 267 ~l~~~~~ 273 (286)
+++++++
T Consensus 271 ~l~~r~~ 277 (431)
T TIGR01788 271 WVIWRDE 277 (431)
T ss_pred EEEEeCh
Confidence 9999875
No 85
>PRK08363 alanine aminotransferase; Validated
Probab=99.85 E-value=4.6e-20 Score=168.78 Aligned_cols=209 Identities=18% Similarity=0.141 Sum_probs=147.0
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
..++|..|++ ++++.+.+++.+.+.... ..|+...+..++++++.+++.+.+|...+. .+|++|+|
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~it~G 101 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-------NYYGPSEGLPELREAIVKREKRKNGVDITP--DDVRVTAA 101 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCcHHHHHHHHHHHHHhcCCCCCh--hhEEEeCC
Confidence 5689998876 468889999988775421 124445677899999999988877753222 36999999
Q ss_pred hH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 122 ~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
++ ++.+++.+++++||.|+++++.|..+ ...+...|.....++ ..+.+++.+|++++++.+.+ ++++|+
T Consensus 102 ~~~al~~~~~~~~~~gd~Vl~~~p~y~~~--------~~~~~~~g~~~v~~~-~~~~~~~~~d~~~l~~~~~~-~~~~v~ 171 (398)
T PRK08363 102 VTEALQLIFGALLDPGDEILIPGPSYPPY--------TGLVKFYGGVPVEYR-TIEEEGWQPDIDDIRKKITE-KTKAIA 171 (398)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCCcch--------HHHHHHcCCEEEEec-cccccCCcCCHHHHHhhCCc-ceEEEE
Confidence 99 88878899999999999999555544 334445565444442 24435678999999999877 889999
Q ss_pred Ec-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCCc--ceEEEeCCCCCCC--CCCceEEE
Q 023191 201 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFEY--ADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 201 i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~~--~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
++ |+| +|...+ +++|.++|+++|+++|+|+++..-... +.... .+.. .-+++.|++|+|+ |.+-|+++
T Consensus 172 l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~ 250 (398)
T PRK08363 172 VINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYE-GKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIY 250 (398)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccC-CcccCHHHcCcCCcEEEEecchhccCCccceEEEEE
Confidence 87 766 776655 889999999999999999996532221 11111 1111 2366899999864 44459999
Q ss_pred E--ecchh
Q 023191 270 F--RKGVK 275 (286)
Q Consensus 270 ~--~~~~~ 275 (286)
+ ++++.
T Consensus 251 ~~~~~~~~ 258 (398)
T PRK08363 251 FVDPEGKL 258 (398)
T ss_pred EeCcHHHH
Confidence 8 44443
No 86
>PLN02656 tyrosine transaminase
Probab=99.85 E-value=3.2e-20 Score=170.34 Aligned_cols=207 Identities=14% Similarity=0.038 Sum_probs=147.6
Q ss_pred HcCceecCCCC------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC
Q 023191 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (286)
Q Consensus 46 ~~~i~L~~~e~------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~ 119 (286)
.+.++|..|++ ++|+.+++++.+++..... ..|+...+..++++++.+++.+.+|...+. .+|++|
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t 102 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKF------NGYAPTVGLPQARRAIAEYLSRDLPYKLSL--DDVFIT 102 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHHHhcCCCCCc--ccEEEe
Confidence 47799998877 3578999999887764221 124455677899999999998877753332 369999
Q ss_pred CChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
+|++ ++..++.++++|||+|++++|.|+ .+...+...|.+++.+++. ..+++.+|++++++++++ ++++
T Consensus 103 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~--------~~~~~~~~~g~~~~~i~~~-~~~~~~~d~~~l~~~~~~-~~~~ 172 (409)
T PLN02656 103 SGCTQAIDVALSMLARPGANILLPRPGFP--------IYELCAAFRHLEVRYVDLL-PEKGWEVDLDAVEALADQ-NTVA 172 (409)
T ss_pred CChHHHHHHHHHHHhCCCCeEEEeCCCCC--------cHHHHHHHcCCEEEEEeCC-CcCCCCCCHHHHHHHhcc-CceE
Confidence 9999 877788899999999999995553 3333445667666666642 124578999999998877 7888
Q ss_pred EEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC---C--cceEEEeCCCCCCC--CCCce
Q 023191 199 IVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLR--GPRGA 266 (286)
Q Consensus 199 v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~--~~D~v~~s~~K~l~--gp~gG 266 (286)
++++ |+| +|... ++++|+++|++|++++|+|+++. .....+....++ . ..-+++.|++|+|+ |.|-|
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG 251 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYG-HLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLG 251 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhh-hcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEE
Confidence 8887 766 66553 58889999999999999999965 322222111111 1 12367899999864 44559
Q ss_pred EEEEe
Q 023191 267 MIFFR 271 (286)
Q Consensus 267 ~l~~~ 271 (286)
+++..
T Consensus 252 ~~i~~ 256 (409)
T PLN02656 252 WFVTT 256 (409)
T ss_pred EEEEe
Confidence 99984
No 87
>PRK07683 aminotransferase A; Validated
Probab=99.85 E-value=7e-20 Score=166.96 Aligned_cols=233 Identities=13% Similarity=0.077 Sum_probs=161.1
Q ss_pred cccccChHHHHHHHHHHHHHHcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 023191 26 PLEVVDPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (286)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (286)
+.+.+.+..+.............++|..+.+ ++++.+++++.+.+.+.. .+ |+...+..++++++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~------Y~~~~g~~~lr~~ia~~l~~ 80 (387)
T PRK07683 8 RVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITENY-TS------YTHNAGLLELRKAACNFVKD 80 (387)
T ss_pred HHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHHHHHHHHH
Confidence 3444455555555554322345689988876 346788889888776422 12 34446678999999999987
Q ss_pred HCCC--CCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCC
Q 023191 104 AFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180 (286)
Q Consensus 104 ~~g~--~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 180 (286)
.+|+ +++. +|++|+|++ ++.+++.+++++||+|+++++.|. .+...+...|.+++.++ .+.+++
T Consensus 81 ~~g~~~~~~~---~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--------~~~~~~~~~g~~~~~~~--~~~~~~ 147 (387)
T PRK07683 81 KYDLHYSPES---EIIVTIGASEAIDIAFRTILEPGTEVILPAPIYP--------GYEPIIRLCGAKPVFID--TRSTGF 147 (387)
T ss_pred HhCCCCCCCC---cEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcc--------chHHHHHHcCCEEEEee--cCcccC
Confidence 7776 4431 599999999 888788899999999999995444 33334456676655454 554567
Q ss_pred CCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCC-CCC---CcceE
Q 023191 181 YIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPF---EYADV 251 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~---~~~D~ 251 (286)
.+|.+++++.+.+ ++++++++ ++| +|... ++++|+++|+++|+++|+|+++........... ..+ ....+
T Consensus 148 ~~~~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 226 (387)
T PRK07683 148 RLTAEALENAITE-KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTI 226 (387)
T ss_pred CCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeE
Confidence 8899999999877 89999887 666 67554 488899999999999999999764322211110 001 12357
Q ss_pred EEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 252 VTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 252 v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
++.|++|.|+ |.|-|+++++.++.+...
T Consensus 227 ~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~ 256 (387)
T PRK07683 227 VINGLSKSHSMTGWRIGFLFAPSYLAKHIL 256 (387)
T ss_pred EEeeccccccCccceeEEEEcCHHHHHHHH
Confidence 7999999885 444599999887665544
No 88
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1e-19 Score=166.76 Aligned_cols=217 Identities=18% Similarity=0.168 Sum_probs=148.4
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcce-eEEeCCCh
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGV-NVQSLSGS 122 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~-~v~~~sG~ 122 (286)
.+.++|..+++. +++.+.+++.+.+.... ...|+...+..++++++++++.+.+|++.+. . +|++|+|+
T Consensus 33 ~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~--~~~I~it~G~ 104 (403)
T PRK08636 33 EDIIDFSMGNPDGPTPQHIIDKLCESAQKPK------THGYSVSKGIYKLRLAICNWYKRKYNVDLDP--ETEVVATMGS 104 (403)
T ss_pred CCEEEcCCcCCCCCCCHHHHHHHHHHhcCCc------cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCeEEECCCh
Confidence 356888877653 46667777665443211 1224555778899999999999888864322 2 59999999
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHH----HHHhhh--cC
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQL----EKSATL--FR 195 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l----~~~i~~--~~ 195 (286)
+ ++..++.++++|||.|++++ |+|+.+...+...|.+++.++++.+ +++.+|++.+ +++++. .+
T Consensus 105 ~~al~~~~~~l~~~gd~Vlv~~--------P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~ 175 (403)
T PRK08636 105 KEGYVHLVQAITNPGDVAIVPD--------PAYPIHSQAFILAGGNVHKMPLEYN-EDFELDEDQFFENLEKALRESSPK 175 (403)
T ss_pred HHHHHHHHHHhCCCCCEEEEcC--------CCCcchHHHHHhcCCEEEEEecccc-ccCccChhhhhhHHHHHHhhccCC
Confidence 9 88879999999999999999 5555555456677877766664333 4578888754 555542 36
Q ss_pred CcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC--CCCc---ceEEEeCCCCCC--CCC
Q 023191 196 PKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFEY---ADVVTTTTHKSL--RGP 263 (286)
Q Consensus 196 tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~~---~D~v~~s~~K~l--~gp 263 (286)
+++++++ |+| +|...+ +++|+++|++|++++|+|+++..-.......+. .++. ..+.+.|++|.| .|.
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 255 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW 255 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence 8888888 666 775554 678889999999999999996532221111111 1111 224578999988 455
Q ss_pred CceEEEEecchhhhhc
Q 023191 264 RGAMIFFRKGVKEINK 279 (286)
Q Consensus 264 ~gG~l~~~~~~~~~~~ 279 (286)
+.|+++.++++.+..+
T Consensus 256 RiG~iv~~~~li~~~~ 271 (403)
T PRK08636 256 RVGFVVGNKKLVGALK 271 (403)
T ss_pred eeeeeeCCHHHHHHHH
Confidence 6699999888765544
No 89
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=7.1e-20 Score=162.65 Aligned_cols=206 Identities=17% Similarity=0.152 Sum_probs=161.4
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQV 128 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~ 128 (286)
+-|++|..+.++.|+++|.....+.+ +.....+-+.+.+.++..|+.+... +-++.++|+.++.++
T Consensus 7 ~Ll~PGP~~v~~~V~~am~~~~~~h~------------s~~F~~~~~~~~~~L~~v~~t~~~~--~~ll~gsGt~amEAa 72 (383)
T COG0075 7 LLLTPGPVPVPPRVLLAMARPMVGHR------------SPDFVGIMKEVLEKLRKVFGTENGD--VVLLSGSGTLAMEAA 72 (383)
T ss_pred eeeeCCCCCCCHHHHHHhcCCCCCCC------------CHHHHHHHHHHHHHHHHHhcCCCCc--EEEEcCCcHHHHHHH
Confidence 56788988999999999987664422 1334566677889999999987422 223445555599989
Q ss_pred HHHhcCCCCeEEeccCCCCcccCccccccc--cccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc--C
Q 023191 129 YTALLKPHDRIMALDLPHGGHLSHGYQTDT--KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG--A 203 (286)
Q Consensus 129 l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-~tk~v~i~--~ 203 (286)
+..+++|||+||+.. .+.+-.+ ..++..|.+++.+. .. .+-.+|++++++.++++ +.++|.+. .
T Consensus 73 v~sl~~pgdkVLv~~--------nG~FG~R~~~ia~~~g~~v~~~~--~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~E 141 (383)
T COG0075 73 VASLVEPGDKVLVVV--------NGKFGERFAEIAERYGAEVVVLE--VE-WGEAVDPEEVEEALDKDPDIKAVAVVHNE 141 (383)
T ss_pred HHhccCCCCeEEEEe--------CChHHHHHHHHHHHhCCceEEEe--CC-CCCCCCHHHHHHHHhcCCCccEEEEEecc
Confidence 999999999999988 4433222 34667777776664 33 45689999999999852 45666663 6
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhccCC
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGK 282 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~~~ 282 (286)
+.+|...|+++|+++|++||.++|||+..++|..+.+...++ +|+++++++|+|.+|.| |++.++++..+..++.+
T Consensus 142 TSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wg---iDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~ 218 (383)
T COG0075 142 TSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWG---IDVAITGSQKALGAPPGLAFVAVSERALEAIEERK 218 (383)
T ss_pred CcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcC---ccEEEecCchhccCCCccceeEECHHHHHHHhcCC
Confidence 668888999999999999999999999999999998888888 99999999999999999 99999998777666443
No 90
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.85 E-value=5.2e-20 Score=165.49 Aligned_cols=200 Identities=16% Similarity=0.154 Sum_probs=142.3
Q ss_pred ecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHH
Q 023191 51 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVY 129 (286)
Q Consensus 51 L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l 129 (286)
+.++...+++.+++++...... + .....++.+.+++.+++++|++++. ..|++++|++ ++..++
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~~-~------------~~~~~~~~~~~~~~la~~~~~~~~~--~~i~~~~~gt~~l~~~~ 67 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWCH-W------------DSEFNDVTDQVRDRLLALAGGDDNH--TCVLLQGSGTFAVEATI 67 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhccC-C------------CHHHHHHHHHHHHHHHHHhcCCCCC--cEEEEeCCcHHHHHHHH
Confidence 4566667899999999773322 1 0122366677889999999997643 2466665555 888788
Q ss_pred HHhcCCCCeEEeccCC-CCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-CCcEEEEc-CCC-
Q 023191 130 TALLKPHDRIMALDLP-HGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAG-ASA- 205 (286)
Q Consensus 130 ~a~~~~Gd~Vl~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-~tk~v~i~-~~n- 205 (286)
.+++++||++++..+. |+.. +...+...|.+++.++ .+ +++.+|++++++.++++ ++++++++ ++|
T Consensus 68 ~~~~~~~~~vi~~~~~~~~~~-------~~~~a~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 137 (355)
T TIGR03301 68 GSLVPRDGKLLVLINGAYGER-------LAKICEYLGIPHTDLN--FS-EYEPPDLNRIEEALAADPDITHVATVHHETT 137 (355)
T ss_pred HhccCCCCeEEEECCCchhhH-------HHHHHHHcCCceEEEe--cC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCc
Confidence 9999999987776532 2211 1112334566565555 33 45789999999999761 34556554 444
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
+|...|+++|.++|++|++++|+|++|+.|..+.++... ++|++++|+|||++||.| |++++++++.+..
T Consensus 138 ~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~ 208 (355)
T TIGR03301 138 TGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEEL---DVDALIASANKCLEGVPGFGFVIARRDLLEAS 208 (355)
T ss_pred ccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhc---CccEEEecCCcccccCCceeEEEECHHHHHHh
Confidence 678889999999999999999999999888655444333 389999999999988888 9999998865443
No 91
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.85 E-value=2.5e-20 Score=171.23 Aligned_cols=228 Identities=18% Similarity=0.177 Sum_probs=155.2
Q ss_pred hccccccccChHHHHHHHHHHH--HHHcCceecCCCC------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHH
Q 023191 22 QLNAPLEVVDPEIADIIEHEKA--RQWKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (286)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~L~~~e~------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 93 (286)
.++.+...+.......+.+... ...+.++|..|++ ++++.+.+++.+.+.... ...|+...+..+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~------~~~Y~~~~G~~~L 80 (412)
T PTZ00433 7 SMSKHAGRVFNPLRTVTDNAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQE------CNGYPPTVGSPEA 80 (412)
T ss_pred cccHHHHhhhccHHHHHHhhccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCC------CCCCCCCCCcHHH
Confidence 3334444444444444444332 2246789987775 368899999887765311 1224555677899
Q ss_pred HHHHHHHHHHHCC--------CCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccc
Q 023191 94 ESLCQKRALEAFR--------LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (286)
Q Consensus 94 ~~~~~~~~~~~~g--------~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
++++.+++.+.++ ++++ +|++|+|++ ++..++.+++++||+|++++|.| ..+...+...
T Consensus 81 r~aia~~~~~~~~~~~~~~~~~~~~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y--------~~~~~~~~~~ 148 (412)
T PTZ00433 81 REAVATYWRNSFVHKESLKSTIKKD----NVVLCSGVSHAILMALTALCDEGDNILVPAPGF--------PHYETVCKAY 148 (412)
T ss_pred HHHHHHHHHhhccccccccCCCChh----hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCc--------ccHHHHHHHc
Confidence 9999998887654 4453 599999999 88879999999999999999544 4444345567
Q ss_pred eeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEecccccccccc
Q 023191 165 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAA 239 (286)
Q Consensus 165 g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~ 239 (286)
|..+..++++.+ +++.+|++++++.+.+ ++++|+++ |+| +|... ++++|+++|++||++||+|+++. .....
T Consensus 149 g~~~~~i~~~~~-~~~~~d~~~l~~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~ 225 (412)
T PTZ00433 149 GIEMRFYNCRPE-KDWEADLDEIRRLVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA-GMVFN 225 (412)
T ss_pred CCEEEEEecCcc-ccCcCCHHHHHHHhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc-ccccC
Confidence 766666664311 4578999999998887 89999997 666 67544 47788999999999999999964 33221
Q ss_pred CC-CCC--CCC--cceEEEeCCCCCC--CCCCceEEEE
Q 023191 240 GV-IPS--PFE--YADVVTTTTHKSL--RGPRGAMIFF 270 (286)
Q Consensus 240 ~~-~~~--~~~--~~D~v~~s~~K~l--~gp~gG~l~~ 270 (286)
+. ... .+. ..-+++.|++|.| .|.|-|++++
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 226 GATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred CCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEE
Confidence 11 111 111 1236789999987 4445599997
No 92
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.2e-19 Score=165.74 Aligned_cols=237 Identities=14% Similarity=0.087 Sum_probs=161.2
Q ss_pred cccccccChHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHH
Q 023191 24 NAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (286)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (286)
++++....+..+..+....+. ..+.++|..+++. +++.+.+++.+.+.+.. . .|+...+...+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~------~Y~~~~g~~~lr~~i 77 (393)
T PRK05764 5 SKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGK-T------KYTPAAGIPELREAI 77 (393)
T ss_pred hhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-C------CcCCCCChHHHHHHH
Confidence 455555556555444443322 2456888888774 46888888887775421 1 144456778999999
Q ss_pred HHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 98 QKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 98 ~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
++++.+.+|...+. .+|++|+|++ ++..++.+++++||.|+++++.|..+ ...+...|.+++.++.+.
T Consensus 78 a~~~~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~--------~~~~~~~g~~~~~~~~~~- 146 (393)
T PRK05764 78 AAKLKRDNGLDYDP--SQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSY--------PEMVKLAGGVPVFVPTGE- 146 (393)
T ss_pred HHHHHHHhCCCCCH--HHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcch--------HHHHHHcCCEEEEEecCc-
Confidence 99998887653222 3599999998 87778889999999999999555443 334456676666665431
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCC----CCC--C
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPS--P 245 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~--~ 245 (286)
.+++.+|++++++.+++ ++++|+++ |+| +|... ++++|+++|++|++++++|+++......... ... .
T Consensus 147 ~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 225 (393)
T PRK05764 147 ENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPE 225 (393)
T ss_pred ccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCC
Confidence 24578999999999876 88998887 666 66554 4789999999999999999997532221110 000 1
Q ss_pred CCcceEEEeCCCCCCCCC--CceEEEEecchhhhhc
Q 023191 246 FEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 246 ~~~~D~v~~s~~K~l~gp--~gG~l~~~~~~~~~~~ 279 (286)
....++++.|++|+++.| +.|+++.+.++.+..+
T Consensus 226 ~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~ 261 (393)
T PRK05764 226 LRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMS 261 (393)
T ss_pred CcCCEEEEecCcccccCccceeEEEecCHHHHHHHH
Confidence 113578899999987434 3499998877665443
No 93
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.85 E-value=6.3e-20 Score=168.06 Aligned_cols=215 Identities=13% Similarity=0.007 Sum_probs=149.5
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..+.+. +++.+.+++.+.+.... ..|+...+..++++++.+++++.+|.+.+. .+|++|+|++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~ 103 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERGE-------TKYTLVNGTPALRKAIIAKLERRNGLHYAD--NEITVGGGAK 103 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEeCCHH
Confidence 356899888774 46888888888775321 124555778899999999999998884332 3699999998
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++..++.+++++||.|++++|.|..+. ..+...+.....++++.+ +++.+|++++++.+.+ ++++|+++
T Consensus 104 ~al~~~~~~~~~~gd~vl~~~p~y~~y~--------~~~~~~~~~~~~v~~~~~-~~~~~~~~~l~~~~~~-~~~~v~l~ 173 (402)
T PRK06107 104 QAIFLALMATLEAGDEVIIPAPYWVSYP--------DMVLANDGTPVIVACPEE-QGFKLTPEALEAAITP-RTRWLILN 173 (402)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcCHH--------HHHHHcCCEEEEecCCcc-cCCCCCHHHHHhhcCc-CceEEEEE
Confidence 777788889999999999996555442 223344444444443212 4568999999999876 88888887
Q ss_pred -CCC-CCCccC---HHHHHHHHHhc-CCEEEEeccccccccccCCCCCC------CCcceEEEeCCCCCCC--CCCceEE
Q 023191 203 -ASA-YARLYD---YERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSP------FEYADVVTTTTHKSLR--GPRGAMI 268 (286)
Q Consensus 203 -~~n-~g~~~~---l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~------~~~~D~v~~s~~K~l~--gp~gG~l 268 (286)
|+| +|...+ +++|+++|++| ++++|+|++++.-.......+.. +...-++++|++|.|+ |.+-|++
T Consensus 174 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~ 253 (402)
T PRK06107 174 APSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYA 253 (402)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeee
Confidence 777 776655 56778889998 99999999965211111111110 0113467899999884 3444999
Q ss_pred EEecchhhhhc
Q 023191 269 FFRKGVKEINK 279 (286)
Q Consensus 269 ~~~~~~~~~~~ 279 (286)
++++++.+..+
T Consensus 254 ~~~~~~~~~~~ 264 (402)
T PRK06107 254 AGPADLIAAIN 264 (402)
T ss_pred ecCHHHHHHHH
Confidence 99888776555
No 94
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.84 E-value=6.4e-20 Score=171.20 Aligned_cols=200 Identities=14% Similarity=0.149 Sum_probs=143.7
Q ss_pred CCCHHHHHHhccccc-cCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHH---HHH-H
Q 023191 57 FTSVSVMQAVGSVMT-NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQ---VYT-A 131 (286)
Q Consensus 57 ~~~~~v~~a~~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~---~l~-a 131 (286)
.+++.+.+++.+... ..| +.|... ...++..+++.++++++++++|++. +.+..++|+++.+. +++ .
T Consensus 81 ~~~p~i~~~~~~~~~~~~~-tpYq~e---~~sqG~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~~r~~ 152 (481)
T PRK04366 81 KYNPKINEKVARLPGFAEL-HPLQPE---ETVQGALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLMIRAY 152 (481)
T ss_pred CCCHHHHHHHHhCcchhcC-CCCCCh---hhhhHHHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHHHHHH
Confidence 578999998876421 112 112110 2456778899999999999999974 35777778773322 233 3
Q ss_pred hcCCCC----eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-C
Q 023191 132 LLKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-Y 206 (286)
Q Consensus 132 ~~~~Gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~ 206 (286)
++++|| +|+++++.|+++.. .+...|.+++.+++ + +++.+|++++++++++ +|++|+++.+| +
T Consensus 153 ~~~~Gd~~~~~Vlv~~~~hp~~~~--------~~~~~G~~vv~v~~--~-~~~~~D~e~L~~~i~~-~t~~V~v~~Pn~t 220 (481)
T PRK04366 153 HEARGDTKRTEVIVPDSAHGTNPA--------SAAMAGFKVVEIPS--N-EDGLVDLEALKAAVGE-DTAALMLTNPNTL 220 (481)
T ss_pred hhccCcCCCCEEEEcCCccHhHHH--------HHHHcCCEEEEeec--C-CCCCcCHHHHHhhccc-CCeEEEEeCCCCc
Confidence 367777 99999977777654 33467776766664 4 4688999999999987 89999998555 6
Q ss_pred CCc-cCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCC-----c-eEEEEecchhhhh
Q 023191 207 ARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR-----G-AMIFFRKGVKEIN 278 (286)
Q Consensus 207 g~~-~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~-----g-G~l~~~~~~~~~~ 278 (286)
|.. .++++|+++|+++|+++++|+||..+.... ..+ .-.|+|++++++||||++|. + |++++++++.+.+
T Consensus 221 G~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~-~~~-~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~l 297 (481)
T PRK04366 221 GLFERNILEIAEIVHEAGGLLYYDGANLNAILGK-ARP-GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFL 297 (481)
T ss_pred cccchHHHHHHHHHHHcCCEEEEEecChhhhccc-CCc-cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhC
Confidence 765 589999999999999999999998664431 111 11269999999999997553 3 6899998777654
No 95
>PRK09148 aminotransferase; Validated
Probab=99.84 E-value=2.3e-19 Score=164.52 Aligned_cols=214 Identities=14% Similarity=0.126 Sum_probs=144.6
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC--CCCcceeEEeCCCh
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~~~~~v~~~sG~ 122 (286)
+.++|..+++. +++.+.+++.+.+.+.. ...|+...+..++++++++++.+.+|.+ ++. +|++|+|+
T Consensus 31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~I~it~G~ 101 (405)
T PRK09148 31 DIIDLGMGNPDLPTPQHIVDKLCETAQDPR------THRYSASKGIPGLRRAQAAYYARRFGVKLNPDT---QVVATLGS 101 (405)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHcCcc------cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cEEEcCCh
Confidence 56899888773 56888888877654311 1124555677899999999998877763 431 59999999
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
+ ++..++.+++++||.|++++|.|.. +...+...|.++..++++.+ ..+..+++++.+...+ ++++|++
T Consensus 102 ~~al~~~~~~l~~~gd~Vl~~~P~y~~--------~~~~~~~~g~~v~~v~~~~~-~~~~~~l~~~~~~~~~-~~~~v~l 171 (405)
T PRK09148 102 KEGFANMAQAITAPGDVILCPNPSYPI--------HAFGFIMAGGVIRSVPAEPD-EEFFPALERAVRHSIP-KPIALIV 171 (405)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcc--------cHHHHHhcCCEEEEEeCCCC-CCCccCHHHHHhhccc-cceEEEE
Confidence 9 8887999999999999999955444 43344566766666654322 2344455554443334 7889988
Q ss_pred c-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC--CC---cceEEEeCCCCCCC--CCCceEEE
Q 023191 202 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--FE---YADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 202 ~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~~---~~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
+ |+| +|...+ +++|.++|++|+++||+|+++..-.......+.. +. ...+++.|++|.|+ |.+.|+++
T Consensus 172 ~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v 251 (405)
T PRK09148 172 NYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV 251 (405)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeee
Confidence 8 677 776666 4688899999999999999965322211111111 11 13356899999874 45569999
Q ss_pred Eecchhhhhc
Q 023191 270 FRKGVKEINK 279 (286)
Q Consensus 270 ~~~~~~~~~~ 279 (286)
.+.++.+..+
T Consensus 252 ~~~~~i~~l~ 261 (405)
T PRK09148 252 GNERLIAALT 261 (405)
T ss_pred CCHHHHHHHH
Confidence 9887766554
No 96
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=2.3e-20 Score=169.05 Aligned_cols=213 Identities=15% Similarity=0.121 Sum_probs=152.0
Q ss_pred CceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
.++|+.++++ +|+.+++++.+.+..... ....|+. .+...|++++.+++.+.+|.+.+. .+|++|+|++ +
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~----~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~--~~I~it~G~~~~ 100 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAA----GLNRYPD-RDAVALRADLAAYLTAQTGVGLTV--ENVWAANGSNEI 100 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhh----hhccCCC-CchHHHHHHHHHHhhhhccCCCCh--hhEEECCCHHHH
Confidence 5889988874 688899999887643110 0112332 356789989999998887753322 3699999999 8
Q ss_pred HHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 023191 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 203 (286)
Q Consensus 125 ~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~ 203 (286)
+..+++++++|||.|+++. |.|..+...+...|.++ ++++.+ +++.+|++++++++.++++|+|+++ |
T Consensus 101 l~~~~~~~~~~gd~v~v~~--------P~y~~~~~~~~~~g~~~--~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~l~~p 169 (368)
T PRK03317 101 LQQLLQAFGGPGRTALGFV--------PSYSMHPIIARGTHTEW--VEGPRA-ADFTLDVDAAVAAIAEHRPDVVFLTSP 169 (368)
T ss_pred HHHHHHHhcCCCCEEEEeC--------CChHHHHHHHHhcCCee--EEcccC-CCCCCCHHHHHHHHhccCCCEEEEeCC
Confidence 8879999999999999999 55554444445556444 444444 4678999999999875578999887 6
Q ss_pred CC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-----cceEEEeCCCCCCC--CCCceEEEEecchh
Q 023191 204 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSLR--GPRGAMIFFRKGVK 275 (286)
Q Consensus 204 ~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-----~~D~v~~s~~K~l~--gp~gG~l~~~~~~~ 275 (286)
+| +|...+.+++.++++.+++++|+|++|.. ....+. ...+. ...+++.|++|.|+ |.+-|++++++++.
T Consensus 170 ~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~-~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~ 247 (368)
T PRK03317 170 NNPTGTALPLDDVEAILDAAPGIVVVDEAYAE-FRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVV 247 (368)
T ss_pred CCCCCCCCCHHHHHHHHHHCCceEEEeCCchh-hcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHH
Confidence 66 78899999999999999999999999763 211111 11111 12367889999885 44559999988877
Q ss_pred hhhcc
Q 023191 276 EINKQ 280 (286)
Q Consensus 276 ~~~~~ 280 (286)
+..++
T Consensus 248 ~~l~~ 252 (368)
T PRK03317 248 DALRL 252 (368)
T ss_pred HHHHh
Confidence 66653
No 97
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.84 E-value=5.4e-20 Score=172.05 Aligned_cols=220 Identities=12% Similarity=0.095 Sum_probs=146.9
Q ss_pred cCceecCCCCCC-CHHHHHHhcccc----ccC-CCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC----CCCCCcceeE
Q 023191 47 KGLELIPSENFT-SVSVMQAVGSVM----TNK-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNV 116 (286)
Q Consensus 47 ~~i~L~~~e~~~-~~~v~~a~~~~l----~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~~~~~v 116 (286)
+.|+|...||+. .+.+.+.+.+.. ... ....++....|+...+..++++++.+++.+.+| ++++ +|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe----~I 122 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE----RV 122 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh----hE
Confidence 469999999975 233333333321 111 111244445577778899999999999999877 5664 59
Q ss_pred EeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccc-cceeeeEEEecccCCCCCCCCHHHHHHHhh--
Q 023191 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNESTGYIDYDQLEKSAT-- 192 (286)
Q Consensus 117 ~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~-- 192 (286)
++|+|++ ++..++.++++|||.|++++|.|+++ ...+. ..|.+++.+++..+ +++.+|++.+++++.
T Consensus 123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~--------~~~~~~~~G~~vv~v~~~~~-~~~~~~~~~le~a~~~a 193 (496)
T PLN02376 123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAF--------DRDLRWRTGVEIIPVPCSSS-DNFKLTVDAADWAYKKA 193 (496)
T ss_pred EEccchHHHHHHHHHHhCCCCCEEEECCCCccch--------HHHHHhhCCCEEEEEeCCCC-ccCcCCHHHHHHHHHHH
Confidence 9999999 88889999999999999999555444 33333 35665655554322 457899999986542
Q ss_pred ---hcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC--C----C--c--ce--EE
Q 023191 193 ---LFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--F----E--Y--AD--VV 252 (286)
Q Consensus 193 ---~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~----~--~--~D--~v 252 (286)
..++|+|+++ |+| +|...+ +++|+++|++|+++||+|++++.-.......... + + . .+ ++
T Consensus 194 ~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~v 273 (496)
T PLN02376 194 QESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHI 273 (496)
T ss_pred HhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEE
Confidence 1368988887 777 776665 6678889999999999999976432221111100 0 0 0 12 45
Q ss_pred EeCCCCCC--CCCCceEEEEe-cchhhhhc
Q 023191 253 TTTTHKSL--RGPRGAMIFFR-KGVKEINK 279 (286)
Q Consensus 253 ~~s~~K~l--~gp~gG~l~~~-~~~~~~~~ 279 (286)
+.|++|.| .|.+-|+++.. +.+....+
T Consensus 274 v~S~SK~~glpGlRvG~li~~~~~l~~~~~ 303 (496)
T PLN02376 274 VYSLSKDMGLPGFRVGIVYSFNDSVVSCAR 303 (496)
T ss_pred EEeccccCCCCcceEEEEEECCHHHHHHHH
Confidence 78999987 45566999995 44555443
No 98
>PRK06855 aminotransferase; Validated
Probab=99.84 E-value=1.7e-19 Score=166.65 Aligned_cols=204 Identities=14% Similarity=0.095 Sum_probs=141.2
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.++|..|++ .+|+.+.+++.+.+.+.. ...|+...+..+|++++.+++.+.+|++.+. .+|++|+|
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~------~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~--~~I~it~G 104 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDK------SYGYCPTKGVLETREFLAELNNKRGGAQITP--DDIIFFNG 104 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCC------CCCCCCCCCCHHHHHHHHHHHHhccCCCCCH--hHEEEcCc
Confidence 5688877776 568888888887664311 1224556788899999999999887764332 36999999
Q ss_pred hH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccc-cccceeeeEEEecccCC-CCCCCCHHHHHHHhhh-cCCc
Q 023191 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK-ISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL-FRPK 197 (286)
Q Consensus 122 ~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~-~~tk 197 (286)
++ ++..++ .+++|||.|++++|.|+.+ ... ....|..++.++ ++. +++.+|+++|++.+.. .+++
T Consensus 105 ~~~al~~~~-~l~~~Gd~Vlv~~P~Y~~~--------~~~~~~~~g~~~v~v~--~~~~~~~~~d~~~l~~~~~~~~~~~ 173 (433)
T PRK06855 105 LGDAIAKIY-GLLRREARVIGPSPAYSTH--------SSAEAAHAGYPPVTYR--LDPENNWYPDLDDLENKVKYNPSIA 173 (433)
T ss_pred HHHHHHHHH-HhcCCCCeEEEeCCCCchH--------HHHHHHhcCCeEEEEe--cccccCCCCCHHHHHHHHhcCCCce
Confidence 99 776565 4889999999999655443 211 112344444444 442 4578999999999864 2678
Q ss_pred EEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC----C-cceEEEeCCCCCC--CCCCc
Q 023191 198 LIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF----E-YADVVTTTTHKSL--RGPRG 265 (286)
Q Consensus 198 ~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~----~-~~D~v~~s~~K~l--~gp~g 265 (286)
+++++ |+| +|...+ +++|+++|++||++||+|+++.. ....+....++ . ..-+++.|++|+| .|.|.
T Consensus 174 ~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~-l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRi 252 (433)
T PRK06855 174 GILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNN-IVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRC 252 (433)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccc-cccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceE
Confidence 88887 777 776555 66888889999999999999642 22222111111 1 1237799999987 56677
Q ss_pred eEEEE
Q 023191 266 AMIFF 270 (286)
Q Consensus 266 G~l~~ 270 (286)
|++.+
T Consensus 253 G~ii~ 257 (433)
T PRK06855 253 GWIEV 257 (433)
T ss_pred EEEEE
Confidence 99997
No 99
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=1.3e-19 Score=164.68 Aligned_cols=190 Identities=15% Similarity=0.126 Sum_probs=137.2
Q ss_pred CCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-c
Q 023191 55 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-L 133 (286)
Q Consensus 55 e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~-~ 133 (286)
.+..+++.++++.+.+.+.+. + ..+...++| +.+++++|.+. .+.+++|+.++.+++.++ +
T Consensus 9 ~p~~~~~e~~~~~~~l~~~~~--~-------~g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~ 70 (379)
T PRK11658 9 RPAMGDEELAAVKEVLRSGWI--T-------TGPKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGI 70 (379)
T ss_pred CCCCCHHHHHHHHHHHHcCCc--c-------CCHhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCC
Confidence 344567778888887765321 1 113455566 77788888864 255555544887788898 8
Q ss_pred CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHH
Q 023191 134 KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYE 213 (286)
Q Consensus 134 ~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~ 213 (286)
++||+|+++++.|.++.. .+...|.+++.++ ++.+++.+|++++++++++ +||+|+... .+|...+++
T Consensus 71 ~~Gd~Viv~~~~~~~~~~--------~~~~~G~~~v~vd--~~~~~~~~d~~~l~~~i~~-~tkav~~~~-~~G~~~d~~ 138 (379)
T PRK11658 71 GPGDEVITPSLTWVSTLN--------MIVLLGATPVMVD--VDRDTLMVTPEAIEAAITP-RTKAIIPVH-YAGAPADLD 138 (379)
T ss_pred CCCCEEEECCCcHHHHHH--------HHHHcCCEEEEEe--cCCCcCCcCHHHHHHhccc-CCeEEEEeC-CCCCcCCHH
Confidence 999999999977666533 3345676665554 5545678999999999987 899887432 267888999
Q ss_pred HHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCceEEEEec-chh
Q 023191 214 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK-GVK 275 (286)
Q Consensus 214 ~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~-~~~ 275 (286)
+|.++|+++|+++|+|++|+.|....+.....+ +.+++.++.+|++.++.||++++++ ++.
T Consensus 139 ~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~ 200 (379)
T PRK11658 139 AIRAIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDDELA 200 (379)
T ss_pred HHHHHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCHHHH
Confidence 999999999999999999999877654322221 3577788888999998999988864 443
No 100
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.83 E-value=1.8e-19 Score=163.84 Aligned_cols=186 Identities=20% Similarity=0.210 Sum_probs=134.9
Q ss_pred CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-cCC
Q 023191 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKP 135 (286)
Q Consensus 57 ~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~-~~~ 135 (286)
..+++.++++.+.+.+.+ + .......++| +.+++++|.+. .+.+++|+.++.+++.++ ++|
T Consensus 7 ~~~~~~~~~v~~~~~~~~---~------~~g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~ 68 (380)
T TIGR03588 7 SIDQDDIDAVVEVLKSDF---L------TQGPTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGP 68 (380)
T ss_pred CCCHHHHHHHHHHHhcCC---c------cCChhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCC
Confidence 346666788877775522 1 1113344555 77778888764 477776666887788888 899
Q ss_pred CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh----hcCCcEEEEcCCCCCCccC
Q 023191 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT----LFRPKLIVAGASAYARLYD 211 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~----~~~tk~v~i~~~n~g~~~~ 211 (286)
||+|+++++.|.++.. .+...|.+++.++ ++++++.+|++++++.++ + +|++|++.. .+|...+
T Consensus 69 Gd~Viv~~~~~~~~~~--------~~~~~G~~~~~~~--~~~~~~~~d~~~l~~~i~~~~~~-~t~~v~~~~-~~G~~~~ 136 (380)
T TIGR03588 69 GDRVWTTPITFVATAN--------CALYCGAKVDFVD--IDPDTGNIDEDALEKKLAAAKGK-LPKAIVPVD-FAGKSVD 136 (380)
T ss_pred CCEEEeCCcchHHHHH--------HHHHcCCEEEEEe--cCCCcCCcCHHHHHHHhhcccCC-CceEEEEeC-CCCccCC
Confidence 9999999966655432 3345676665554 554567899999999998 5 889888642 2678889
Q ss_pred HHHHHHHHHhcCCEEEEeccccccccccCCCCCC-CCcceEEEeCCC--CCCCCCCceEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-FEYADVVTTTTH--KSLRGPRGAMIFFRKG 273 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-~~~~D~v~~s~~--K~l~gp~gG~l~~~~~ 273 (286)
+++|.++|++||++||+|++|+.|....+ .+.+ ..+.|++++|+| |+++.+.||+++++++
T Consensus 137 ~~~i~~l~~~~~~~lI~D~a~a~g~~~~~-~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~ 200 (380)
T TIGR03588 137 MQAIAALAKKHGLKIIEDASHALGAEYGG-KPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE 200 (380)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccCccCC-EeCCCccccceEEEecCCCCcccccCceEEEECCH
Confidence 99999999999999999999999876322 2222 113699999988 8998888999888764
No 101
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.83 E-value=6.1e-20 Score=180.76 Aligned_cols=219 Identities=16% Similarity=0.131 Sum_probs=148.5
Q ss_pred CceecCC-CCCCCH-HHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 48 GLELIPS-ENFTSV-SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~~-e~~~~~-~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
.+-|+.. -.++++ .+.+++.+++.+.+ ++++.. +.......++.+.+|+.+++++|+++++ .+|++|+|+| +
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~--~np~s~-~~~s~~~~~~~e~aR~~ia~~lga~~~~--~~VvFtsnaT~a 109 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVY--GNPHSQ-SDSSMRSSDTIESARQQVLEYFNAPPSD--YACVFTSGATAA 109 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhcc--CCCCcC-cchhhhHHHHHHHHHHHHHHHhCCCccc--eEEEEeCChHHH
Confidence 4566544 334454 55555555554422 233321 2222344566678999999999997643 2589999999 6
Q ss_pred HHHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-----CCCCCCH--HHHHHHhh----
Q 023191 125 NFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-----STGYIDY--DQLEKSAT---- 192 (286)
Q Consensus 125 ~~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-----~~~~~d~--e~l~~~i~---- 192 (286)
+..++.++ +++||+|+++..+|.+... ++.. +...|.+++.++++.+. +.+.+++ +++++.++
T Consensus 110 lnlva~~l~~~~gd~Iv~t~~eH~svl~-~~~~----a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 110 LKLVGETFPWSSESHFCYTLENHNSVLG-IREY----ALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred HHHHHHHCCCCCCCeEEEeeccccchHH-HHHH----HHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 66577777 7899999999999988774 3211 12235556666543111 1233443 66766532
Q ss_pred -----hcCCcEEEEc-CCC-CCCccCHHHHHHHHHhc--------CCEEEEeccccccccccCCCCCCCCcceEEEeCCC
Q 023191 193 -----LFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ--------KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (286)
Q Consensus 193 -----~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~--------~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~ 257 (286)
..+|++|.++ .+| +|.+.|++.|.++++.. ++++++|+||++|..+.++.... +|++++|+|
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~---~Dfl~~S~H 261 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYP---ADFVVVSFY 261 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcC---CCEEEEecc
Confidence 1257899887 667 88999999775555532 35899999999999998887766 999999999
Q ss_pred CCCCCCCc-eEEEEecchhhhhc
Q 023191 258 KSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 258 K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
||++||.| |+|++++++.+.++
T Consensus 262 K~~GgP~G~G~L~vr~~~~~~l~ 284 (805)
T PLN02724 262 KIFGYPTGLGALLVRRDAAKLLK 284 (805)
T ss_pred eeccCCCCceEEEEehhhhhhhc
Confidence 99988999 99999988655433
No 102
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.83 E-value=1.1e-19 Score=165.85 Aligned_cols=208 Identities=17% Similarity=0.142 Sum_probs=147.1
Q ss_pred cCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
+.++|..++. .+++.+.+++.+.+.. +..+++..+ ...+..++++++++++++++|.+. +|++++|++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~---~~~G~~~l~~~l~~~la~~~g~~~-----~i~~tsG~~ 113 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVR---FICGTQDLHKELEEKLAKFLGTED-----AILYSSCFD 113 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccc---cccCCcHHHHHHHHHHHHHhCCCc-----EEEEcChHH
Confidence 4588877653 2688899999887755 211232211 123445777888899999999752 599999976
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh---c--CCcE
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---F--RPKL 198 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~---~--~tk~ 198 (286)
++..+++++++|||+|+++++.|+++.. .+...+.++..+ + ..|++++++.+++ . ++++
T Consensus 114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~--------~~~~~~~~~~~~--~------~~d~~~l~~~i~~~~~~~~~~~~ 177 (397)
T PRK06939 114 ANGGLFETLLGKEDAIISDALNHASIID--------GVRLCKAKRYRY--A------NNDMADLEAQLKEAKEAGARHKL 177 (397)
T ss_pred HHHHHHHHhCCCCCEEEEEhhhhHHHHH--------HHHhcCCceEEe--C------CCCHHHHHHHHHhhhccCCCCeE
Confidence 7777889999999999999976665532 334455443322 2 1488899888764 2 5677
Q ss_pred EEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCC----CCCCC-CcceEEEeCCCCCCCCCCceEEEEe
Q 023191 199 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPF-EYADVVTTTTHKSLRGPRGAMIFFR 271 (286)
Q Consensus 199 v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~ 271 (286)
|+++ ..| +|...++++|.++|++|++++|+|++|..|...... ....+ ..+|++++|+||+|+|+++|+++++
T Consensus 178 v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~ 257 (397)
T PRK06939 178 IATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGR 257 (397)
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeC
Confidence 7765 333 677889999999999999999999998766443210 00111 2478999999999988889999999
Q ss_pred cchhhhhc
Q 023191 272 KGVKEINK 279 (286)
Q Consensus 272 ~~~~~~~~ 279 (286)
+++.+..+
T Consensus 258 ~~~~~~l~ 265 (397)
T PRK06939 258 KEVIDWLR 265 (397)
T ss_pred HHHHHHHH
Confidence 88776655
No 103
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=5.6e-20 Score=166.13 Aligned_cols=184 Identities=21% Similarity=0.226 Sum_probs=132.3
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-cCCCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHD 137 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~-~~~Gd 137 (286)
.++.++++.+.+.+.+.. .......++| +.+++++|... .+.++||++|+.+++.++ +++||
T Consensus 4 ~~e~~~~v~~~l~s~~~~--------~~g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gd 66 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWLS--------TYGPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGD 66 (363)
T ss_dssp HHHHHHHHHHHHHHTCCS--------SSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTS
T ss_pred CHHHHHHHHHHHHhCCcc--------CCCHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCc
Confidence 355667777777664311 1125566777 77788888775 477888888888899998 89999
Q ss_pred eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHH
Q 023191 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRK 217 (286)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ 217 (286)
+|+++...+.+...+ +...|.++ +.++++++++.+|++.+++++++ +||+|++. +-.|...++++|.+
T Consensus 67 eVi~p~~t~~~~~~a--------i~~~G~~p--v~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~ 134 (363)
T PF01041_consen 67 EVIVPAYTFPATASA--------ILWAGAEP--VFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRA 134 (363)
T ss_dssp EEEEESSS-THHHHH--------HHHTT-EE--EEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHH
T ss_pred eEecCCCcchHHHHH--------HHHhccEE--EEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHH
Confidence 999999777766553 34667544 55578878999999999999998 99998863 34677779999999
Q ss_pred HHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCC--CCCCCCCceEEEEecc
Q 023191 218 VCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRKG 273 (286)
Q Consensus 218 ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~gp~gG~l~~~~~ 273 (286)
+|+++|++||.|+||+.|....+..... ..|+.++|+| |.+....||+++++++
T Consensus 135 ~~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~ 190 (363)
T PF01041_consen 135 IARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDP 190 (363)
T ss_dssp HHHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTH
T ss_pred HHHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHH
Confidence 9999999999999999998776543333 3688888875 9998889999999974
No 104
>PRK09265 aminotransferase AlaT; Validated
Probab=99.83 E-value=4e-19 Score=162.87 Aligned_cols=202 Identities=17% Similarity=0.125 Sum_probs=139.0
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHC--CCCCCCcceeEEeC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF--RLDPEKWGVNVQSL 119 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--g~~~~~~~~~v~~~ 119 (286)
+.++|..|++ ++++.+.+++.+.+... .+ |+...+..++++++.+++.+.. +++++ +|++|
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~------Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~----~i~~t 101 (404)
T PRK09265 34 KILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QG------YSDSKGLFSARKAIMQYYQQKGIPDVDVD----DIYIG 101 (404)
T ss_pred CeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CC------CCCCCCcHHHHHHHHHHHhccCCCCCCcc----cEEEe
Confidence 5689988654 26788888887655331 12 3444666788888777776543 45554 59999
Q ss_pred CChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
+|++ ++..++.+++++||+|+++++.|..+ ...+...|.....++.+.+ +++.+|++++++.+++ ++++
T Consensus 102 ~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~--------~~~~~~~g~~~v~~~~~~~-~~~~~d~~~l~~~~~~-~~~~ 171 (404)
T PRK09265 102 NGVSELIVMAMQALLNNGDEVLVPAPDYPLW--------TAAVSLSGGKPVHYLCDEE-AGWFPDLDDIRSKITP-RTKA 171 (404)
T ss_pred CChHHHHHHHHHHhCCCCCEEEEeCCCCcCh--------HHHHHHcCCEEEEEecccc-cCCCCCHHHHHHhccc-cceE
Confidence 9999 77778889999999999999665543 3233445655544543222 3578999999999877 8999
Q ss_pred EEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC---CC-c-ceEEEeCCCCCCC--CCCce
Q 023191 199 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FE-Y-ADVVTTTTHKSLR--GPRGA 266 (286)
Q Consensus 199 v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~---~~-~-~D~v~~s~~K~l~--gp~gG 266 (286)
|+++ |+| +|...+ +++|+++|+++|+++|+|+++.. ....+..... +. . .-+++.|++|+|+ |.+-|
T Consensus 172 v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 250 (404)
T PRK09265 172 IVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDK-ILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVG 250 (404)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhh-ccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceE
Confidence 8887 777 777777 88899999999999999999652 2211111111 11 1 2255789999874 55669
Q ss_pred EEEEe
Q 023191 267 MIFFR 271 (286)
Q Consensus 267 ~l~~~ 271 (286)
+++..
T Consensus 251 ~~v~~ 255 (404)
T PRK09265 251 WMVLS 255 (404)
T ss_pred EEEEe
Confidence 99863
No 105
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.83 E-value=3.3e-19 Score=161.36 Aligned_cols=205 Identities=16% Similarity=0.090 Sum_probs=142.4
Q ss_pred ecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHH
Q 023191 51 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVY 129 (286)
Q Consensus 51 L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l 129 (286)
|...-.++.+.+++++.+.+...+ +.+. .+ .+..++++.+++++++++|++.+ ++++++|++ ++..++
T Consensus 25 ~~~~~~~~~~~~~~a~~~~~~~~~--~~~~--~~---~~~~~~~~~~~~~la~~~g~~~~----~~~~~~ggt~a~~~a~ 93 (371)
T PRK13520 25 LSSMCTEPHPIARKAHEMFLETNL--GDPG--LF---PGTAKLEEEAVEMLGELLHLPDA----YGYITSGGTEANIQAV 93 (371)
T ss_pred eeeeecCchHHHHHHHHHHHhcCC--CCcc--cC---ccHHHHHHHHHHHHHHHhCCCCC----CeEEecCcHHHHHHHH
Confidence 444445677888899988776432 2221 12 23456667888999999998754 367777777 877676
Q ss_pred HHhcC----CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 023191 130 TALLK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (286)
Q Consensus 130 ~a~~~----~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~ 204 (286)
.++.+ +||+|++++..|.++.. .+...|.+++.++. + +++.+|+++|++.+++ ++++|++. ++
T Consensus 94 ~~~~~~~~~~~~~vl~~~~~h~s~~~--------~~~~~g~~~~~v~~--~-~~~~~d~~~l~~~i~~-~~~~vi~~~~~ 161 (371)
T PRK13520 94 RAARNLAKAEKPNIVVPESAHFSFDK--------AADMLGVELRRAPL--D-DDYRVDVKAVEDLIDD-NTIGIVGIAGT 161 (371)
T ss_pred HHHHhhccCCCceEEecCcchHHHHH--------HHHHcCceEEEecC--C-CCCcCCHHHHHHHHhh-CCEEEEEEcCC
Confidence 66643 68999999976655422 33455666666653 3 4578999999999987 78766654 44
Q ss_pred C-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC--CC--CCcceEEEeCCCCCCCCCCc-eEEEEec-chhhh
Q 023191 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SP--FEYADVVTTTTHKSLRGPRG-AMIFFRK-GVKEI 277 (286)
Q Consensus 205 n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~--~~~~D~v~~s~~K~l~gp~g-G~l~~~~-~~~~~ 277 (286)
| +|...|+++|.++|+++|+++++|++|+.+..+..... .. ..++|++++++|||..+|.+ |++++++ ++.+.
T Consensus 162 ~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~ 241 (371)
T PRK13520 162 TELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDA 241 (371)
T ss_pred cCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHh
Confidence 4 78999999999999999999999999986654322211 11 22589999999998776655 7666654 45444
Q ss_pred h
Q 023191 278 N 278 (286)
Q Consensus 278 ~ 278 (286)
.
T Consensus 242 l 242 (371)
T PRK13520 242 L 242 (371)
T ss_pred h
Confidence 3
No 106
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=2.1e-19 Score=161.82 Aligned_cols=205 Identities=14% Similarity=0.131 Sum_probs=145.2
Q ss_pred CceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
.++|+.++++ +|+.+++++.+.+......+| +. ....+++ +.++++++++++ +|++|+|++ +
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y------~~-~~~~~lr----~~ia~~~~~~~~----~i~it~G~~~~ 88 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSSQVNIY------PD-PTAEKLR----EELARYCSVVPT----NIFVGNGSDEI 88 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcCcccCC------CC-ccHHHHH----HHHHHHhCCCcc----cEEEecCHHHH
Confidence 4678888874 689999999887653211122 22 1234455 666667788775 599999999 7
Q ss_pred HHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 023191 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 203 (286)
Q Consensus 125 ~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~ 203 (286)
+..++.++++|||+|++++| .|..+...+...|.+++.++ .+ +++.+|++++++.+++.++|+|+++ +
T Consensus 89 l~~~~~~l~~~gd~Vlv~~p--------~y~~~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~~~~k~v~l~~p 157 (351)
T PRK14807 89 IHLIMLAFINKGDVVIYPHP--------SFAMYSVYSKIAGAVEIPVK--LK-EDYTYDVGSFIKVIEKYQPKLVFLCNP 157 (351)
T ss_pred HHHHHHHhcCCCCEEEEeCC--------ChHHHHHHHHHcCCeEEEee--cC-CCCCCCHHHHHHHhhccCCCEEEEeCC
Confidence 77788899999999999994 44433334456676555554 44 4578999999999975589999997 7
Q ss_pred CC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCC--CCCCceEEEEecchhhhh
Q 023191 204 SA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKEIN 278 (286)
Q Consensus 204 ~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l--~gp~gG~l~~~~~~~~~~ 278 (286)
+| +|...+.+++.++|++++.++|+|+++. .... ......+. ...+++.|++|++ .|.+-|+++.+.++.+..
T Consensus 158 ~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~~-~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~ 235 (351)
T PRK14807 158 NNPTGSVIEREDIIKIIEKSRGIVVVDEAYF-EFYG-NTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYL 235 (351)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCEEEEeCcch-hhcc-cchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHH
Confidence 77 7889999999999999888999999974 2221 11111111 1347899999987 455569999988877655
Q ss_pred cc
Q 023191 279 KQ 280 (286)
Q Consensus 279 ~~ 280 (286)
++
T Consensus 236 ~~ 237 (351)
T PRK14807 236 NL 237 (351)
T ss_pred HH
Confidence 53
No 107
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=4.2e-19 Score=165.29 Aligned_cols=218 Identities=11% Similarity=0.067 Sum_probs=144.9
Q ss_pred cCceecCCCCCCCHHHHHHhccccccC----CCC--CCCCCcccCCcchHHHHHHHHHHHHHHHCC----CCCCCcceeE
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNK----YSE--GYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNV 116 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~----~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~~~~~v 116 (286)
+.|+|..+||+.+..+++.......+. ... .......|+...+..+|++++.+++.+.+| ++++ +|
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~----~I 114 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN----KL 114 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH----He
Confidence 569999999976554444443322110 000 011122356667888999999999988776 3453 59
Q ss_pred EeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccc-cceeeeEEEecccC-CCCCCCCHHHHHHHhhh
Q 023191 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLN-ESTGYIDYDQLEKSATL 193 (286)
Q Consensus 117 ~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~-~~~~~~d~e~l~~~i~~ 193 (286)
++|+|++ ++..++.++++|||.|++++|.|+. +...+. ..|.+++.++ .+ .+++.+|++++++.+.+
T Consensus 115 iit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~--------~~~~~~~~~g~~~v~v~--~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 115 VLTAGATSANETLMFCLAEPGDAFLLPTPYYPG--------FDRDLKWRTGVEIVPIH--CSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEECCCCCCc--------hHHHHhhcCCcEEEEEe--cCCccCCcCCHHHHHHHHHH
Confidence 9999999 8887999999999999999954444 333333 3565555454 43 25678999999988754
Q ss_pred -----cCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC-------------Ccce
Q 023191 194 -----FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-------------EYAD 250 (286)
Q Consensus 194 -----~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~-------------~~~D 250 (286)
.++|+|+++ |+| +|...+ +++|+++|++|+++||+|++++.-..........+ ...-
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~v 264 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRV 264 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcE
Confidence 278999998 777 776555 66788899999999999999653212111000000 0123
Q ss_pred EEEeCCCCCC--CCCCceEEEEecc-hhhhh
Q 023191 251 VVTTTTHKSL--RGPRGAMIFFRKG-VKEIN 278 (286)
Q Consensus 251 ~v~~s~~K~l--~gp~gG~l~~~~~-~~~~~ 278 (286)
+++.|++|.| .|.+.|++++.++ +....
T Consensus 265 i~l~S~SK~~~l~GlRiG~li~~~~~l~~~~ 295 (468)
T PLN02450 265 HIVYSLSKDLGLPGFRVGAIYSNDEMVVSAA 295 (468)
T ss_pred EEEEeccccCCCCCccEEEEEECCHHHHHHH
Confidence 6799999987 5667799999765 34443
No 108
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.82 E-value=1.1e-19 Score=163.20 Aligned_cols=204 Identities=16% Similarity=0.174 Sum_probs=143.6
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.|+|..++++ +|+.+++++.+++... ..|+ ...+ .+ +++.++++++++++ +|++++|++
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~y~------~~~~-~~----lr~~ia~~~~~~~~----~i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKL--HRYP------DPDP-AE----LKQALADYYGVDPE----QILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHh--hcCC------CCCH-HH----HHHHHHHHhCcChH----HEEEcCCHHH
Confidence 56899888763 6889999998876431 1232 2222 34 44777778888764 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.+++++||+|+++++.| +.+...+...|.+++.++ ++ +++.+|++++++.+.+ ++++|+++
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y--------~~~~~~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~~~~-~~~~v~l~~ 150 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTY--------SMYEISAKIHGAEVVKVP--LD-EDGQLDLEDILVAIDD-KPKLVFLCS 150 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCH--------HHHHHHHHHcCCeEEEec--cC-CCCCCCHHHHHHhcCC-CCCEEEEeC
Confidence 77668888899999999999544 333334456676665554 44 3478999999998876 89999997
Q ss_pred CCC-CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCCceEEEEecchh
Q 023191 203 ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRKGVK 275 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l~--gp~gG~l~~~~~~~ 275 (286)
++| +|...+++++.++|+.+ ++++|+|++|. +....+.....+. ..++++.|++|+|+ |++.|++++++++.
T Consensus 151 p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~ 229 (346)
T TIGR01141 151 PNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEII 229 (346)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHH
Confidence 776 77889999999999887 99999999976 2221110000000 13477899999984 44459999988877
Q ss_pred hhhcc
Q 023191 276 EINKQ 280 (286)
Q Consensus 276 ~~~~~ 280 (286)
+..+.
T Consensus 230 ~~~~~ 234 (346)
T TIGR01141 230 DALNK 234 (346)
T ss_pred HHHHh
Confidence 66553
No 109
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.82 E-value=4.8e-20 Score=165.29 Aligned_cols=174 Identities=18% Similarity=0.156 Sum_probs=129.6
Q ss_pred cCCcchHHHHHHHHHHHHHHHCCCC-CCCcceeEEeCCChH-HHHHHHHHhcC------------CC--CeEEeccCCCC
Q 023191 84 YGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-SNFQVYTALLK------------PH--DRIMALDLPHG 147 (286)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~v~~~sG~~-a~~~~l~a~~~------------~G--d~Vl~~~~~~~ 147 (286)
|.......++|+++++++++++|.+ .+ .++++|+|++ ++..++.++.. +| +.|+++++.|.
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~---~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~ 106 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSED---ADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHV 106 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCC---CCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchh
Confidence 4555678899999999999999986 32 2588888888 88777777642 33 47787886776
Q ss_pred cccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCccCHHHHHHHHH
Q 023191 148 GHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYDYERIRKVCN 220 (286)
Q Consensus 148 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~-~~n-~g~~~~l~~I~~ia~ 220 (286)
++.. .+...|.+++.++ .+ +++.+|+++|++.+.+. ++++|+++ ++| +|...|+++|+++|+
T Consensus 107 ~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~ 175 (345)
T cd06450 107 SVEK--------AAAYLDVKVRLVP--VD-EDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAE 175 (345)
T ss_pred HHHH--------HHHHHhcCeEEee--eC-CCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHH
Confidence 6543 2334566666665 44 34689999999998652 57777776 555 788899999999999
Q ss_pred hcCCEEEEeccccccccccCCCC---CCCCcceEEEeCCCCCCCCCCc-eEEEEe
Q 023191 221 KQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFR 271 (286)
Q Consensus 221 ~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~g-G~l~~~ 271 (286)
++|+++++|++|+.+........ ..+.++|++++|+|||+++|.| |+++++
T Consensus 176 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~ 230 (345)
T cd06450 176 KYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR 230 (345)
T ss_pred HhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH
Confidence 99999999999988876433221 1223589999999999999888 877654
No 110
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.82 E-value=5.1e-19 Score=141.86 Aligned_cols=163 Identities=22% Similarity=0.257 Sum_probs=116.2
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
+++++++++++.+.+ ++.+++|++ ++.++++++.++|++|+++++.|.++.. . .+...|.+++.++
T Consensus 4 ~~~~~l~~~~~~~~~----~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~~~~~v~-- 70 (170)
T cd01494 4 ELEEKLARLLQPGND----KAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGAKPVPVP-- 70 (170)
T ss_pred HHHHHHHHHcCCCCC----cEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCCEEEEec--
Confidence 355888899965443 367767777 8888999999999999999988877752 1 2334565555554
Q ss_pred cCCCC-CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceE
Q 023191 175 LNEST-GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADV 251 (286)
Q Consensus 175 ~~~~~-~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~ 251 (286)
.+... ...|.+.+++.....++++++++ +.| .|...|+++|.++|+++|+++|+|++|..+............++|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~ 150 (170)
T cd01494 71 VDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADV 150 (170)
T ss_pred cCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCE
Confidence 33222 23333456554444488999887 444 4577789999999999999999999998877754221122235999
Q ss_pred EEeCCCCCCCCCCceEEEEe
Q 023191 252 VTTTTHKSLRGPRGAMIFFR 271 (286)
Q Consensus 252 v~~s~~K~l~gp~gG~l~~~ 271 (286)
++.|+||+|++|++|++++|
T Consensus 151 ~~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 151 VTFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEEEcccccCCCceEEEEeC
Confidence 99999999999777999875
No 111
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.82 E-value=2.9e-19 Score=160.37 Aligned_cols=195 Identities=19% Similarity=0.183 Sum_probs=135.3
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCe
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDR 138 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~ 138 (286)
+|++++++.+++.+ +..++.+.+.+ .+.....+.+++.+++++|.+. .+++++|+.++.+++++++++||+
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~---~~~~~~~~~l~~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd~ 87 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLI---SGTSDLHEELEEELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGDL 87 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCee---cCCchHHHHHHHHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCCE
Confidence 68999999998875 43222221111 1223444556688888898753 477888877777678888999999
Q ss_pred EEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh----cCCcEEEEc-CCC-CCCccCH
Q 023191 139 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----FRPKLIVAG-ASA-YARLYDY 212 (286)
Q Consensus 139 Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~----~~tk~v~i~-~~n-~g~~~~l 212 (286)
|+++++.|+++.. .+...|.+++.++ .+|++++++++++ .++++++++ ++| +|...|+
T Consensus 88 Vl~~~~~~~~~~~--------~~~~~g~~~~~~~--------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~ 151 (349)
T cd06454 88 IISDSLNHASIID--------GIRLSGAKKRIFK--------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPL 151 (349)
T ss_pred EEEehhhhHHHHH--------HHHHcCCceEEec--------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCH
Confidence 9999977666432 2234554443332 2478889888875 256777776 555 7788999
Q ss_pred HHHHHHHHhcCCEEEEeccccccccccCC-----CCCCCCcceEEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 213 ERIRKVCNKQKAIMLADMAHISGLVAAGV-----IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 213 ~~I~~ia~~~~~~vivD~a~~~g~~~~~~-----~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
++|.++|++||+++|+|++|+.|...... ......++|++++|+||+|+. +||+++.++++.+..+
T Consensus 152 ~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~gG~i~~~~~~~~~~~ 222 (349)
T cd06454 152 PELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VGGYIAGSKELIDYLR 222 (349)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cCCEEECCHHHHHHHH
Confidence 99999999999999999999877653211 011112589999999998865 6788888877665444
No 112
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.82 E-value=1.9e-19 Score=167.85 Aligned_cols=203 Identities=15% Similarity=0.152 Sum_probs=142.4
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHH-HCCC--CC-CCcceeEEeCC
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE-AFRL--DP-EKWGVNVQSLS 120 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~g~--~~-~~~~~~v~~~s 120 (286)
+.|+|..+++ ++|+.+.+++ +.+.. +. |+...+..++++++.+++.+ .++. .+ ++ .+|++|+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~-~~~~~---~~------Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~--~~I~vT~ 168 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELV-DGIIG---DN------YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGE--FDLFAVE 168 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHH-HHHhc---CC------CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCc--CeEEEeC
Confidence 5688888887 3566777744 44422 11 45557788899888875544 3322 22 11 2699999
Q ss_pred ChH-HHHHHHHH-----hcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CCCCCCHHHHHHHhhh
Q 023191 121 GSP-SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL 193 (286)
Q Consensus 121 G~~-a~~~~l~a-----~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~ 193 (286)
|++ ++..++.+ +++|||+|++++ |.|+.|...+.+.|..++.++++.++ ++|.+|++++++++++
T Consensus 169 Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~--------P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 169 GGTAAMCYIFDSLKENGLLKAGDKIALMT--------PIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred CHHHHHHHHHHHHhhhhcCCCCCEEEEeC--------CChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 999 77767775 689999999999 66666655556666556667766543 4589999999998887
Q ss_pred cCCcEEEEc-CCC-CCCccC---HHHHHHHHHh--cCCEEEEeccccccccccCCCCCCC---CcceEEEeCCCCCC--C
Q 023191 194 FRPKLIVAG-ASA-YARLYD---YERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSL--R 261 (286)
Q Consensus 194 ~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~---~~~D~v~~s~~K~l--~ 261 (286)
++|+|+++ |+| +|...+ +++|+++|++ ++++||+|+++.. ... .. ...+ ...-+++.|++|+| .
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~-f~~-~~-~s~~~~~~~~~I~v~SfSK~f~mt 316 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGT-FVD-DF-RSLFAVLPYNTILVYSFSKYFGAT 316 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChh-hcc-cc-cCHHHhCCCCEEEEeehhhhccCc
Confidence 99999987 777 776655 7788888964 5999999999652 221 11 1111 12447899999987 6
Q ss_pred CCCceEEEEecc
Q 023191 262 GPRGAMIFFRKG 273 (286)
Q Consensus 262 gp~gG~l~~~~~ 273 (286)
|+|-|+++++++
T Consensus 317 G~RlG~i~~~~~ 328 (527)
T PRK09275 317 GWRLGVIALHED 328 (527)
T ss_pred HhHHhhhhcCch
Confidence 777799999875
No 113
>PLN02721 threonine aldolase
Probab=99.82 E-value=3.6e-19 Score=160.06 Aligned_cols=205 Identities=17% Similarity=0.133 Sum_probs=135.7
Q ss_pred CceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHH
Q 023191 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNF 126 (286)
Q Consensus 48 ~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~ 126 (286)
.++|..+++ .+++.+++++.+...... ..+| .....++| +.+++++|.+. .+++++|+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~~--~~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~ 69 (353)
T PLN02721 7 VVDLRSDTVTKPTDAMRAAMANAEVDDD------VLGY--DPTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNL 69 (353)
T ss_pred hhhhhcccccCCCHHHHHHHHhccCCCc------ccCC--CHHHHHHH----HHHHHHhCCce-----eEEecCccHHHH
Confidence 467777777 468888888875311100 1111 12244555 77778888764 377777877666
Q ss_pred HHHHHhcC-CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh------cCCcEE
Q 023191 127 QVYTALLK-PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRPKLI 199 (286)
Q Consensus 127 ~~l~a~~~-~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~------~~tk~v 199 (286)
+++.++++ +||+|+++++.|.+....+. .+...|.+++.++ .+ +++.+|++++++.+++ .++++|
T Consensus 70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 70 ISVLVHCDVRGSEVILGDNSHIHLYENGG-----ISTLGGVHPRTVK--NN-EDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred HHHHHHccCCCCeEEEcCccceehhcccc-----hhhhcCceeEecC--CC-cCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 67888887 99999999966543221100 1234565555554 44 5678999999999973 278999
Q ss_pred EEc-CCC--CCCccC---HHHHHHHHHhcCCEEEEeccccccccc-cCCCCCC-CCcceEEEeCCCCCCCCCCceEEEEe
Q 023191 200 VAG-ASA--YARLYD---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSP-FEYADVVTTTTHKSLRGPRGAMIFFR 271 (286)
Q Consensus 200 ~i~-~~n--~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~-~~~~D~v~~s~~K~l~gp~gG~l~~~ 271 (286)
+++ ++| +|...+ +++|.++|++||+++|+|++|..+... .+..... ..++|.++.++||+|++|.||+++.+
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~ 221 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGS 221 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecC
Confidence 996 444 345544 789999999999999999998755321 1221111 12588999999999998877767777
Q ss_pred cchhhh
Q 023191 272 KGVKEI 277 (286)
Q Consensus 272 ~~~~~~ 277 (286)
+++.+.
T Consensus 222 ~~~~~~ 227 (353)
T PLN02721 222 KSFIRK 227 (353)
T ss_pred HHHHHh
Confidence 766543
No 114
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.82 E-value=6.5e-19 Score=159.62 Aligned_cols=190 Identities=14% Similarity=0.102 Sum_probs=134.0
Q ss_pred CCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-c
Q 023191 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-L 133 (286)
Q Consensus 56 ~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~-~ 133 (286)
+..+++.++++.+.+.+.+.. +.. .+.+++.+++++++|.+. +++++|++ ++.+++.++ +
T Consensus 7 p~~~~~e~~a~~~~~~~~~~~--------~~g----~~~~~~e~~la~~~g~~~------~v~~~sgt~aL~~~l~al~~ 68 (376)
T TIGR02379 7 PPVTGQELEYIAEAISEGKLS--------GDG----PFSRRCETWLENRTGTKK------ALLTPSCTAALEMAALLLDI 68 (376)
T ss_pred CCCCHHHHHHHHHHHHcCCcc--------CCc----HHHHHHHHHHHHHhCCCe------EEEeCCHHHHHHHHHHHcCC
Confidence 345677788888888663311 111 233344477888888754 77778777 776677887 8
Q ss_pred CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHH
Q 023191 134 KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYE 213 (286)
Q Consensus 134 ~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~ 213 (286)
+|||+|+++++.|.++.. .+...|.+++.+ +++++++.+|++++++++++ +||+|+.+. .+|...+++
T Consensus 69 ~pGd~Viv~~~t~~~~~~--------~~~~~G~~~v~v--d~d~~~~~~d~~~le~~i~~-~tk~Iip~~-~~G~~~d~~ 136 (376)
T TIGR02379 69 QPGDEVIMPSYTFVSTAN--------AFVLRGAKIVFV--DIRPDTMNIDETLIESAITH-RTKAIVPVH-YAGVACDMD 136 (376)
T ss_pred CCcCEEEECCCCcHHHHH--------HHHHcCCEEEEE--ecCCCcCCCCHHHHHHhcCc-CceEEEEeC-CCCCccCHH
Confidence 999999999977666543 333567656555 45655688999999999987 899987542 268888999
Q ss_pred HHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCC--CC-CCCCceEEEEec-chhhh
Q 023191 214 RIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK--SL-RGPRGAMIFFRK-GVKEI 277 (286)
Q Consensus 214 ~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K--~l-~gp~gG~l~~~~-~~~~~ 277 (286)
+|.++|++||++||+|++|+.|....+..... ..|+.++|+|+ .+ .|++||++++++ ++.+.
T Consensus 137 ~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~--~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~ 202 (376)
T TIGR02379 137 TIMALANKHQLFVIEDAAQGVMSTYKGRALGS--IGHLGTFSFHETKNYTSGGEGGALLINDQAFIER 202 (376)
T ss_pred HHHHHHHHCCCEEEEECccccCCccCCcccCC--CCCEEEEeCCCCCcCcccCCceEEEECCHHHHHH
Confidence 99999999999999999999886533322211 25777888764 44 466899988875 34433
No 115
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.82 E-value=1.7e-18 Score=158.75 Aligned_cols=208 Identities=16% Similarity=0.043 Sum_probs=142.9
Q ss_pred HcCceecCCCC------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC
Q 023191 46 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (286)
Q Consensus 46 ~~~i~L~~~e~------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~ 119 (286)
.+.++|..+++ ++++.+++++.+.+...... .|+...+..++++++++++....+.+.+. .+|++|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~ii~t 102 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN------GYAPSVGALAAREAVAEYLSSDLPGKLTA--DDVVLT 102 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHHhhcCCCCCH--HHEEEe
Confidence 35788987765 46889999998877542211 23444667788877777777655543222 369999
Q ss_pred CChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
+|++ ++.+++.+++++||+|+++++.|.. +...+...|.+++.+++..+ +++.+|++++++++.+ ++++
T Consensus 103 ~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~--------~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~ 172 (403)
T TIGR01265 103 SGCSQAIEICIEALANPGANILVPRPGFPL--------YDTRAAFSGLEVRLYDLLPE-KDWEIDLDGLEALADE-KTVA 172 (403)
T ss_pred cChHHHHHHHHHHhCCCCCEEEEeCCCchh--------HHHHHHHcCCEEEEecCCcc-cCCccCHHHHHHHhCc-CccE
Confidence 9999 8887999999999999999955443 33334456655655553222 4578999999999877 8898
Q ss_pred EEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC---C-c-ceEEEeCCCCCCCCC--Cce
Q 023191 199 IVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E-Y-ADVVTTTTHKSLRGP--RGA 266 (286)
Q Consensus 199 v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~-~-~D~v~~s~~K~l~gp--~gG 266 (286)
++++ |+| +|...+ +++|.++|+++|+++|+|+++.. ....+....++ . . .-+++.|++|.|+.| +-|
T Consensus 173 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (403)
T TIGR01265 173 IVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGH-MVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLG 251 (403)
T ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccc-cccCCCCccchhhhccCCcEEEEeecccccCCCcceEE
Confidence 8887 766 776654 88999999999999999999652 22211110111 1 1 126689999986544 459
Q ss_pred EEEEec
Q 023191 267 MIFFRK 272 (286)
Q Consensus 267 ~l~~~~ 272 (286)
++++.+
T Consensus 252 ~~v~~~ 257 (403)
T TIGR01265 252 WIIIHD 257 (403)
T ss_pred EEEEeC
Confidence 998853
No 116
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.81 E-value=3.1e-19 Score=159.56 Aligned_cols=196 Identities=17% Similarity=0.191 Sum_probs=130.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD 137 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd 137 (286)
+++.+++++.+.+... . .|+..... +++++++++++| +. + .+++++|+.++..++.+++++||
T Consensus 10 ~~~~v~~a~~~~~~~~---~-----~~~~~~~~----~~l~~~~a~~~g-~~-~---~~~~~~gt~a~~~~~~~l~~~gd 72 (338)
T cd06502 10 PTPEMLEAMAAANVGD---D-----VYGEDPTT----AKLEARAAELFG-KE-A---ALFVPSGTAANQLALAAHTQPGG 72 (338)
T ss_pred CCHHHHHHHHhcccCC---c-----ccCCCHHH----HHHHHHHHHHhC-CC-e---EEEecCchHHHHHHHHHhcCCCC
Confidence 6899999998765321 0 12222333 345588888888 32 2 34444454488778899999999
Q ss_pred eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh------cCCcEEEEc-CCCCCC--
Q 023191 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRPKLIVAG-ASAYAR-- 208 (286)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~------~~tk~v~i~-~~n~g~-- 208 (286)
+|+++++.|.++..... ...+.|.+++.++ .+ ++.+|++++++++++ .++++|+++ ++|.|.
T Consensus 73 ~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~v~--~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~ 143 (338)
T cd06502 73 SVICHETAHIYTDEAGA-----PEFLSGVKLLPVP--GE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVY 143 (338)
T ss_pred eEEEecCcceeeecCCc-----HHHHcCceEEeec--CC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCcccc
Confidence 99999977765432110 1223565555554 33 367999999999874 268999997 666663
Q ss_pred -ccCHHHHHHHHHhcCCEEEEeccccccccc-cCCCCCCC-CcceEEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 209 -LYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 209 -~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
..++++|+++|+++|+++|+|+||..+... .+.....+ .++|+++.|+||+|+.|.|++++.++++.+..+
T Consensus 144 ~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~ 217 (338)
T cd06502 144 PLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARAR 217 (338)
T ss_pred CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHH
Confidence 446788999999999999999998644321 11110111 248899999999998887676777777655443
No 117
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.81 E-value=1.7e-18 Score=158.65 Aligned_cols=205 Identities=17% Similarity=0.121 Sum_probs=142.8
Q ss_pred cCceecCCCC------CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC-CCCCCcceeEEeC
Q 023191 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSL 119 (286)
Q Consensus 47 ~~i~L~~~e~------~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g-~~~~~~~~~v~~~ 119 (286)
+.++|..+++ ++++.+++++.+.+..... ..|+...+..++++++.+++.+..+ ++++ +|++|
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~----~i~~t 101 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKY------NGYAPTVGALSAREAIASYYHNPDGPIEAD----DVVLC 101 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCC------CCCCCCCCCHHHHHHHHHHHhhcCCCCCHH----HEEEC
Confidence 5588987765 3688899998877654211 1244456677888888888775322 3443 59999
Q ss_pred CChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
+|++ ++.+++.+++++||+|++++ |.|..+...+...|..+..++++.+ +++.+|++.+++.+++ ++++
T Consensus 102 ~G~~~al~~~~~~l~~~gd~v~i~~--------P~y~~~~~~~~~~g~~v~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~ 171 (401)
T TIGR01264 102 SGCSHAIEMCIAALANAGQNILVPR--------PGFPLYETLAESMGIEVKLYNLLPD-KSWEIDLKQLESLIDE-KTAA 171 (401)
T ss_pred cChHHHHHHHHHHhCCCCCEEEEeC--------CCChhHHHHHHHcCCEEEEeecCCc-cCCCCCHHHHHHHhcc-CceE
Confidence 9999 88778899999999999999 5555444455667766655554322 3578999999998877 7899
Q ss_pred EEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC---Cc--ceEEEeCCCCCC--CCCCce
Q 023191 199 IVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EY--ADVVTTTTHKSL--RGPRGA 266 (286)
Q Consensus 199 v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~~--~D~v~~s~~K~l--~gp~gG 266 (286)
|+++ |+| +|... ++++|+++|+++|++||+|+++. .....+....++ .. .-+++.|++|.| .|.|-|
T Consensus 172 v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG 250 (401)
T TIGR01264 172 LIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYG-DMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLG 250 (401)
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhh-hhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEE
Confidence 9887 666 66555 47889999999999999999964 322211111111 11 136799999975 444559
Q ss_pred EEEEec
Q 023191 267 MIFFRK 272 (286)
Q Consensus 267 ~l~~~~ 272 (286)
++++.+
T Consensus 251 ~iv~~~ 256 (401)
T TIGR01264 251 WIIIHD 256 (401)
T ss_pred EEEecC
Confidence 999874
No 118
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.81 E-value=2.1e-18 Score=157.64 Aligned_cols=208 Identities=15% Similarity=0.161 Sum_probs=139.3
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +++.+.+++.+..... .+ |+...+..++++++.+++.+ .|...+. .+|++|+|++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~------Y~~~~g~~~lr~~ia~~~~~-~~~~~~~--~~i~~t~G~~~ 99 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEV--LA------YSHSQGIPELREAFAKYYKK-WGIDVEP--DEILITNGGSE 99 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCC--cC------cCCCCCCHHHHHHHHHHHHH-hCCCCCc--ceEEEcCChHH
Confidence 46888888773 5788888887654221 12 34456678888888887763 4442222 3699999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCC-CCHHHHHHHhhhcCCcEEEEc
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY-IDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++..++.+++++||+|++++|.|..+ ...+...|..++.++++.+ +++. .|++++++++++ ++++|+++
T Consensus 100 al~~~~~~l~~~gd~Vl~~~p~y~~~--------~~~~~~~g~~~~~v~~~~~-~g~~~~~~~~l~~~~~~-~~~~v~i~ 169 (397)
T PRK07568 100 AILFAMMAICDPGDEILVPEPFYANY--------NGFATSAGVKIVPVTTKIE-EGFHLPSKEEIEKLITP-KTKAILIS 169 (397)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCccH--------HHHHHHcCCEEEEeecCcc-cCCCCCCHHHHHHhcCc-cceEEEEE
Confidence 77778888899999999999544432 2233456665655553212 3344 468999999877 89999886
Q ss_pred -CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCC-CCCC--CCc---ceEEEeCCCCCCC--CCCceEEE
Q 023191 203 -ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSP--FEY---ADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 203 -~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~--~~~---~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
|+| +|... ++++|+++|+++++++|+|+++. +....+. .... +.+ .-+++.|++|.|+ |.+.|+++
T Consensus 170 ~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~ 248 (397)
T PRK07568 170 NPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYR-EFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI 248 (397)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccch-hcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEe
Confidence 766 77655 47889999999999999999964 2221111 1111 111 2377899999885 55569999
Q ss_pred Ee-cchhh
Q 023191 270 FR-KGVKE 276 (286)
Q Consensus 270 ~~-~~~~~ 276 (286)
+. +++.+
T Consensus 249 ~~~~~~~~ 256 (397)
T PRK07568 249 SKNKELIA 256 (397)
T ss_pred cCCHHHHH
Confidence 85 45554
No 119
>PRK08175 aminotransferase; Validated
Probab=99.81 E-value=1.8e-18 Score=158.13 Aligned_cols=215 Identities=14% Similarity=0.118 Sum_probs=145.0
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcce-eEEeCCCh
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGV-NVQSLSGS 122 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~-~v~~~sG~ 122 (286)
.+.++|..+.+. +++.+.+++.+.+.... ...|+...+..++++++++++.+.+|...+. . +|++|+|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~i~~t~G~ 100 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPD------THGYSTSRGIPRLRRAISRWYQDRYDVDIDP--ESEAIVTIGS 100 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC------cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEccCc
Confidence 356788776553 46667777666553311 1224556778899999999998887763321 2 59999999
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEE
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLI 199 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v 199 (286)
+ ++.+++.++++|||+|++++|.|+.+ ...+...|.++..++ .+.+ ..+.++++++++. .++++|
T Consensus 101 ~~~l~~~~~~~~~~gd~Vlv~~P~y~~~--------~~~~~~~g~~~~~v~--~~~~--~~~~~~l~~~l~~~~~~~~~v 168 (395)
T PRK08175 101 KEGLAHLMLATLDHGDTVLVPNPSYPIH--------IYGAVIAGAQVRSVP--LVEG--VDFFNELERAIRESYPKPKMM 168 (395)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcch--------HHHHHHcCCeEEEEe--cccC--CCcHHHHHHHHhhccCCceEE
Confidence 8 77668888999999999999555443 323445676555554 4422 2247888887764 268999
Q ss_pred EEc-CCC-CCCccCH---HHHHHHHHhcCCEEEEeccccccccccCCCCC--CCC---cceEEEeCCCCCCCCC--CceE
Q 023191 200 VAG-ASA-YARLYDY---ERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE---YADVVTTTTHKSLRGP--RGAM 267 (286)
Q Consensus 200 ~i~-~~n-~g~~~~l---~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~---~~D~v~~s~~K~l~gp--~gG~ 267 (286)
+++ |+| +|...+. ++|+++|++||+++|+|+++..-......... .+. ...+++.|++|.|+.| +.|+
T Consensus 169 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~ 248 (395)
T PRK08175 169 ILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGF 248 (395)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhhee
Confidence 987 677 7766665 78999999999999999997532221111111 111 1336689999998444 4599
Q ss_pred EEEecchhhhhcc
Q 023191 268 IFFRKGVKEINKQ 280 (286)
Q Consensus 268 l~~~~~~~~~~~~ 280 (286)
++.++++.+..++
T Consensus 249 ~~~~~~l~~~~~~ 261 (395)
T PRK08175 249 MVGNPELVSALAR 261 (395)
T ss_pred eeCCHHHHHHHHH
Confidence 9998888776654
No 120
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.81 E-value=6.6e-19 Score=162.06 Aligned_cols=205 Identities=14% Similarity=0.107 Sum_probs=135.5
Q ss_pred CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhc
Q 023191 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL 133 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~ 133 (286)
+-.+.|+++++++.+++.+..+..|.-. .+..+ ...+.+++.+++++|.+. .+++.+|++++.+++ ..+
T Consensus 89 g~s~l~~~vieAv~~~~~~y~~l~~~l~---~g~~g--~r~~~le~~lA~l~gae~-----alvv~sg~aAi~l~l-~~l 157 (454)
T TIGR00474 89 GRAPLAEEAIEAVTDAARGYSNLEYDLE---TGKRG--SRYSHVEGLLCELTGAED-----ALVVNNNAAAVLLAL-NTL 157 (454)
T ss_pred CCCCCCHHHHHHHHHHHhcccchhcccc---ccccc--hHHHHHHHHHHHHhCCCc-----EEEECCHHHHHHHHH-HHh
Confidence 4446799999999988865211111100 01111 112345588999999875 377888887776566 457
Q ss_pred CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCC---C--
Q 023191 134 KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY---A-- 207 (286)
Q Consensus 134 ~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n~---g-- 207 (286)
.+||+|++++.+|..+-.. +.+ .......|.+++.+ +.+ ...|++++++++++ +|++|++. ++|+ |
T Consensus 158 ~~GdeVIvs~~e~v~~ggs-~~i-~~~~~~~G~~~~~v--~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~~~G~~ 229 (454)
T TIGR00474 158 AKGKEVIVSRGELVEIGGS-FRI-PDVMEQSGAKLVEV--GTT---NRTHLKDYEDAITE-NTALLLKVHTSNYRIVGFT 229 (454)
T ss_pred CCcCEEEECCChhhhhcch-hhH-HHHHHHcCCEEEEe--CCC---CCCCHHHHHHhcCc-CCEEEEEEccCcccccCCC
Confidence 9999999998775332111 111 01223456555444 322 24589999999988 99998875 7773 4
Q ss_pred CccCHHHHHHHHHhcCCEEEEecccccccccc----CC--CC---CCCC-cceEEEeCCCCCCCCCCceEEEEecchhhh
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMAHISGLVAA----GV--IP---SPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~----~~--~~---~~~~-~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (286)
...|+++|+++||+||+++++|.+ .|.+.. ++ .+ .++. |+|++++|+||||+||.+|++++++++.+.
T Consensus 230 ~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~ 307 (454)
T TIGR00474 230 EEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIER 307 (454)
T ss_pred CCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHh
Confidence 478999999999999999999975 343210 11 11 1222 699999999999999999999999887654
Q ss_pred hc
Q 023191 278 NK 279 (286)
Q Consensus 278 ~~ 279 (286)
++
T Consensus 308 l~ 309 (454)
T TIGR00474 308 LK 309 (454)
T ss_pred hh
Confidence 43
No 121
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=3.3e-19 Score=160.92 Aligned_cols=203 Identities=16% Similarity=0.138 Sum_probs=144.2
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +++.+++++.+.+.. . .| | +..+..+++ +.++++++++++ +|++|+|++
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~--~~-----~-p~~g~~~lr----~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-L--AL-----Y-PDGYAPELR----TKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-h--hc-----C-CCCcHHHHH----HHHHHHhCCCHH----HEEECCCHHH
Confidence 56889888874 688899998876643 1 11 1 123455555 666666788764 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.+++++||+|++++|.| ..+...+...|.++..+++ + ++.+|++++++.+++ ++++++++
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y--------~~~~~~~~~~g~~~~~~~~--~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTF--------SQYRHNAIIEGAEVREVPL--K--DGGHDLEAMLKAIDE-QTKIVWICN 159 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCH--------HHHHHHHHHcCCeEEEEec--C--CCCcCHHHHHHhcCC-CCCEEEEeC
Confidence 77768888999999999999544 4433344556766666654 3 467899999998877 89999987
Q ss_pred CCC-CCCccCHHHHHHHHHh--cCCEEEEeccccccccccCCCCCCC---C--cceEEEeCCCCCCC--CCCceEEEEec
Q 023191 203 ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLR--GPRGAMIFFRK 272 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~---~--~~D~v~~s~~K~l~--gp~gG~l~~~~ 272 (286)
|+| +|...+.++|.++++. +++++|+|+++...... +..+..+ . ...+++.|++|.|+ |.+.|++++++
T Consensus 160 p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 160 PNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTA-EDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCC-cccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 777 7888899999888877 59999999997543221 1111110 0 14578899999885 55569999988
Q ss_pred chhhhhcc
Q 023191 273 GVKEINKQ 280 (286)
Q Consensus 273 ~~~~~~~~ 280 (286)
++.+..++
T Consensus 239 ~~~~~~~~ 246 (359)
T PRK03158 239 ELIEKLNI 246 (359)
T ss_pred HHHHHHHH
Confidence 87765543
No 122
>PRK04311 selenocysteine synthase; Provisional
Probab=99.81 E-value=7.9e-19 Score=161.96 Aligned_cols=206 Identities=12% Similarity=0.093 Sum_probs=135.4
Q ss_pred CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh
Q 023191 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL 132 (286)
Q Consensus 53 ~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~ 132 (286)
.+-.+.++++.+++.+++.+..+..|.. ..+..+ ..-+.+++.+++++|.+. .+++++|+.++.+++. .
T Consensus 93 lg~s~l~~~v~eav~~~~~~~~~le~~l---~~g~~g--~r~~~~e~~lA~l~Gae~-----a~vv~sgtaAl~l~l~-~ 161 (464)
T PRK04311 93 LGRALLSEAAIEAVTEAARGYSNLEYDL---ATGKRG--SRDRALAALLCALTGAED-----ALVVNNNAAAVLLALN-A 161 (464)
T ss_pred CCCCCCCHHHHHHHHHHHhcccccccch---hhcccc--hHHHHHHHHHHHHhCCCe-----EEEECCHHHHHHHHHH-H
Confidence 3445689999999998876521111100 001011 112245588899999864 3777777777765664 4
Q ss_pred cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCC---C-
Q 023191 133 LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAY---A- 207 (286)
Q Consensus 133 ~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n~---g- 207 (286)
+.+||+|++++.++.+.-. .+.. .......|.+++.+ +.+ ...+++++++++++ +|++|++. ++|+ |
T Consensus 162 l~~GdeVIvs~~e~~~~gg-s~~i-~~~~~~~G~~l~~v--~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i~G~ 233 (464)
T PRK04311 162 LAAGKEVIVSRGELVEIGG-AFRI-PDVMRQAGARLVEV--GTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRIEGF 233 (464)
T ss_pred hCCCCEEEEcchhhhhcCc-chhh-HHHHHHCCcEEEEE--CCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCcccccc
Confidence 6899999999866543211 1111 01123456555444 322 34579999999988 89998875 7773 3
Q ss_pred -CccCHHHHHHHHHhcCCEEEEeccccccccc----cC--CCC---CCCC-cceEEEeCCCCCCCCCCceEEEEecchhh
Q 023191 208 -RLYDYERIRKVCNKQKAIMLADMAHISGLVA----AG--VIP---SPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKE 276 (286)
Q Consensus 208 -~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~----~~--~~~---~~~~-~~D~v~~s~~K~l~gp~gG~l~~~~~~~~ 276 (286)
...|+++|+++||+||+++++|+++ |.+. .+ ..+ .++. ++|++++|+|||++||++|++++++++.+
T Consensus 234 ~~~~dl~eI~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~ 311 (464)
T PRK04311 234 TKEVSLAELAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIA 311 (464)
T ss_pred CCcCCHHHHHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHH
Confidence 5679999999999999999999963 2221 00 111 1122 69999999999999999999999998876
Q ss_pred hhc
Q 023191 277 INK 279 (286)
Q Consensus 277 ~~~ 279 (286)
.++
T Consensus 312 ~l~ 314 (464)
T PRK04311 312 RLK 314 (464)
T ss_pred HHh
Confidence 555
No 123
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=5.3e-19 Score=159.43 Aligned_cols=206 Identities=16% Similarity=0.165 Sum_probs=145.4
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|+.++|+ +|+.+++++.+.+......+|+ . .+..+++ +.+++++|++.++ +|++|+|++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~-~~~~~lr----~~ia~~~~~~~~~---~I~~t~G~~~ 92 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYP------D-PRAAALK----AALRAAMGVPAGA---DVLLGNGSDE 92 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCC------C-CCHHHHH----HHHHHHhCcCCCC---cEEEcCCHHH
Confidence 57889999884 6899999998877532111232 2 2334555 6666777876532 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.+++++||+|++++ |.|..+...+...|.+++.++ ++ +++.+|++++++.+.+.++++|+++
T Consensus 93 ~i~~~~~~~~~~gd~vlv~~--------P~y~~~~~~~~~~g~~~~~i~--~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 161 (356)
T PRK04870 93 LIQLLALACAKPGATVLAPE--------PGFVMYRMSAKLAGLEFVGVP--LT-ADFTLDLPAMLAAIAEHRPALVFLAY 161 (356)
T ss_pred HHHHHHHHhcCCCCEEEECC--------CCHHHHHHHHHHcCCEEEEec--CC-CCCCCCHHHHHHHhhcCCCCEEEEcC
Confidence 77778888899999999999 555544445667786665554 44 4688999999999875589999998
Q ss_pred CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCC--CCCCceEEEEecchhhh
Q 023191 203 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l--~gp~gG~l~~~~~~~~~ 277 (286)
|+| +|...+.+++.++++..++++|+|+++.. .......+ .+. ...+++.|++| + .|.+.|++++++++.+.
T Consensus 162 p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~-~~~~~~~~-~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~ 238 (356)
T PRK04870 162 PNNPTGNLFDDADVERIIEAAPGLVVVDEAYQP-FAGDSWLP-RLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAE 238 (356)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCEEEEECCchh-hcCcchHH-HHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHH
Confidence 766 77888888888888777889999999642 21111111 111 13477999999 5 34456999998877665
Q ss_pred hcc
Q 023191 278 NKQ 280 (286)
Q Consensus 278 ~~~ 280 (286)
.++
T Consensus 239 ~~~ 241 (356)
T PRK04870 239 LDK 241 (356)
T ss_pred HHH
Confidence 543
No 124
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.81 E-value=1.8e-18 Score=158.77 Aligned_cols=209 Identities=13% Similarity=0.087 Sum_probs=137.2
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +++.+.+++.+.+..... ......|+...+..+|++++.+++.+..|.+.+. .+|++|+|++
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~ 110 (409)
T PRK07590 35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGT--AETFRGYGPEQGYDFLREKIAENDYQARGCDISA--DEIFISDGAKC 110 (409)
T ss_pred ceEEecCcCCCCCCCHHHHHHHHHHHhcccc--cCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCCh--hhEEECCCHHH
Confidence 56899988884 578888888877654110 0111234555778899999999887777653332 3699999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee---------eEEEecccCC-CCCCCCHHHHHHHhhh
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF---------FETMPYRLNE-STGYIDYDQLEKSATL 193 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~~~v~~~~~~-~~~~~d~e~l~~~i~~ 193 (286)
++. ++..+++|||+|++++ |+|+.+...+...|.. .++++++++. +++.+|+++ +
T Consensus 111 al~-~l~~~~~~gd~V~v~~--------P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~ 175 (409)
T PRK07590 111 DTG-NILDIFGPDNTIAVTD--------PVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------E 175 (409)
T ss_pred HHH-HHHHhcCCCCEEEEeC--------CCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------c
Confidence 766 4556789999999999 4444444444555643 0133334442 245555431 3
Q ss_pred cCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC---CCc---ceEEEeCCCCCC--
Q 023191 194 FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FEY---ADVVTTTTHKSL-- 260 (286)
Q Consensus 194 ~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~---~~~---~D~v~~s~~K~l-- 260 (286)
++|+|+++ |+| +|...+ +++|+++|++|+++||+|+++.. ....+....+ +.. .-+++.|++|+|
T Consensus 176 -~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 253 (409)
T PRK07590 176 -KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEA-FISDPSLPHSIYEIEGARECAIEFRSFSKTAGF 253 (409)
T ss_pred -CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchh-hccCCCCCcchhhCCCcccceEEEecCccccCC
Confidence 89999997 666 775555 66788889999999999999653 2221111111 111 236689999987
Q ss_pred CCCCceEEEEecchhh
Q 023191 261 RGPRGAMIFFRKGVKE 276 (286)
Q Consensus 261 ~gp~gG~l~~~~~~~~ 276 (286)
.|.+-|++++.+++.+
T Consensus 254 pGlRiG~~i~~~~li~ 269 (409)
T PRK07590 254 TGTRCAYTVVPKELKG 269 (409)
T ss_pred cCceeEEEEcCHHHhh
Confidence 4556699999887665
No 125
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=7.7e-19 Score=159.68 Aligned_cols=203 Identities=16% Similarity=0.125 Sum_probs=143.3
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..|+|+ +|+.+++++.+... ...|+ . .+..+++ +.+++++|++++ +|++|+|++
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~~---~~~Yp------~-~~~~~lr----~~ia~~~~~~~~----~I~~t~Ga~~ 114 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMKF---PYVYP------D-PESRRLR----AALAEDSGLESE----NILVGCGADE 114 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhHh---hccCC------C-CCHHHHH----HHHHHHhCcChh----hEEEcCCHHH
Confidence 57999999874 67888888864211 01122 2 2234444 777777888775 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.+++++||+|++++ |.|..|...+...|.++..++ .+ +++.+|++++++.+...++++|+++
T Consensus 115 ~i~~~~~~~~~~gd~Vlv~~--------P~y~~y~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 183 (380)
T PLN03026 115 LIDLLMRCVLDPGDKIIDCP--------PTFGMYVFDAAVNGAEVIKVP--RT-PDFSLDVPRIVEAVETHKPKLLFLTS 183 (380)
T ss_pred HHHHHHHHhcCCCCEEEEcC--------CChHHHHHHHHHcCCEEEEee--cC-CCCCcCHHHHHHHHhccCCcEEEEeC
Confidence 77778888999999999999 555555445556777666665 33 4688999999999843389999998
Q ss_pred CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCC--CCCCceEEEEecchhhh
Q 023191 203 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l--~gp~gG~l~~~~~~~~~ 277 (286)
|+| +|...+.+++.++++.. ++||+|+++.. ....+.....+. ...+++.|++|.| .|.|-|+++++.++.+.
T Consensus 184 P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~ 261 (380)
T PLN03026 184 PNNPDGSIISDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 261 (380)
T ss_pred CCCCCCCCCCHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHH
Confidence 666 78899999999999865 89999999642 221110000011 1458899999987 45566999998887765
Q ss_pred hcc
Q 023191 278 NKQ 280 (286)
Q Consensus 278 ~~~ 280 (286)
.++
T Consensus 262 l~~ 264 (380)
T PLN03026 262 LWR 264 (380)
T ss_pred HHH
Confidence 543
No 126
>PRK05839 hypothetical protein; Provisional
Probab=99.80 E-value=3e-18 Score=155.54 Aligned_cols=209 Identities=17% Similarity=0.103 Sum_probs=142.3
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +++.+.+++.+.... . ..|+...+..++++++++++++.+|.+.+. .+|++|+|++
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~-~-------~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~--~~I~it~G~~~ 94 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHL-L-------NKYPKSAGEESLREAQRGFFKRRFKIELKE--NELIPTFGTRE 94 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhc-c-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence 67899888874 577788887654422 1 124555677899999999999988853222 3699999999
Q ss_pred HHHHHHHHhc--CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 124 SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 124 a~~~~l~a~~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
++..++.+++ ++||.|+++. |+|+.|...+...|.+++.++++-+ +++.+|+++.+ + + ++|+|++
T Consensus 95 al~~~~~~~~~~~~gd~vlv~~--------P~y~~~~~~~~~~g~~v~~v~~~~~-~~~~~d~~~~~--~-~-~~k~v~i 161 (374)
T PRK05839 95 VLFNFPQFVLFDKQNPTIAYPN--------PFYQIYEGAAIASRAKVLLMPLTKE-NDFTPSLNEKE--L-Q-EVDLVIL 161 (374)
T ss_pred HHHHHHHHHhcCCCCCEEEECC--------CCchhhHHHHHhcCCEEEEeecccc-cCCcCCcchhh--h-c-cccEEEE
Confidence 7765667764 5899999999 6665555555677766666653212 35677765543 2 3 6999999
Q ss_pred c-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC--------C--cceEEEeCCCCCC--CCCC
Q 023191 202 G-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF--------E--YADVVTTTTHKSL--RGPR 264 (286)
Q Consensus 202 ~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~--------~--~~D~v~~s~~K~l--~gp~ 264 (286)
+ |+| +|...+ +++|+++|+++|+++|+|+++.. .......+..+ . ..-+++.|++|.| .|.|
T Consensus 162 ~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~-~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlR 240 (374)
T PRK05839 162 NSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSE-IYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLR 240 (374)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhh-cccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccce
Confidence 8 666 775544 67888889999999999999653 22111111100 0 1237799999975 5556
Q ss_pred ceEEEEecchhhhhc
Q 023191 265 GAMIFFRKGVKEINK 279 (286)
Q Consensus 265 gG~l~~~~~~~~~~~ 279 (286)
.|+++.++++.+..+
T Consensus 241 iG~ii~~~~~~~~~~ 255 (374)
T PRK05839 241 SGFIAGDASILKKYK 255 (374)
T ss_pred eEEEecCHHHHHHHH
Confidence 699999887766554
No 127
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.80 E-value=3e-18 Score=156.62 Aligned_cols=209 Identities=16% Similarity=0.181 Sum_probs=146.6
Q ss_pred cCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC--CCCCcceeEEeCCCh
Q 023191 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~~~~v~~~sG~ 122 (286)
..++|..+.+ ++++.+.+++.+.+.... .....|+...+...+++.+.+++.+.++. +++ +|++|+|+
T Consensus 34 ~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~ 105 (394)
T PRK06836 34 NVFDFSLGNPSVPPPAAVKEALRELAEEED----PGLHGYMPNAGYPEVREAIAESLNRRFGTPLTAD----HIVMTCGA 105 (394)
T ss_pred CeEEecCcCCCCCCCHHHHHHHHHHHhcCC----cCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcC----cEEEeCCh
Confidence 3478877665 357888888877665321 11123455577888998898988877665 443 59999999
Q ss_pred H-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 023191 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (286)
Q Consensus 123 ~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i 201 (286)
+ ++..++.+++++||.|+++++.|..+ ...+...|.+++.++ .+.+++.+|++++++++++ ++++|++
T Consensus 106 ~~al~~~~~~l~~~gd~Vli~~p~~~~~--------~~~~~~~g~~v~~v~--~~~~~~~~d~~~l~~~~~~-~~~~v~~ 174 (394)
T PRK06836 106 AGALNVALKAILNPGDEVIVFAPYFVEY--------RFYVDNHGGKLVVVP--TDTDTFQPDLDALEAAITP-KTKAVII 174 (394)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccH--------HHHHHHcCCEEEEEe--cCCccCcCCHHHHHhhcCc-CceEEEE
Confidence 9 77778899999999999999555443 323445666665565 4434578999999999987 8999998
Q ss_pred c-CCC-CCCccC---HHHHHHHHHh------cCCEEEEeccccccccccC-CCCCCCC--cceEEEeCCCCCCCCC--Cc
Q 023191 202 G-ASA-YARLYD---YERIRKVCNK------QKAIMLADMAHISGLVAAG-VIPSPFE--YADVVTTTTHKSLRGP--RG 265 (286)
Q Consensus 202 ~-~~n-~g~~~~---l~~I~~ia~~------~~~~vivD~a~~~g~~~~~-~~~~~~~--~~D~v~~s~~K~l~gp--~g 265 (286)
+ ++| +|...+ +++|+++|++ ||+++|+|+++.. ....+ .....+. ...+++.|++|.|+.| +-
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRi 253 (394)
T PRK06836 175 NSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYRE-IVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERI 253 (394)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccc-cccCCCCCCChHHccCcEEEEecchhhccCcceee
Confidence 7 666 676655 6677888998 8999999999643 22211 1111111 2458899999988644 45
Q ss_pred eEEEEecchh
Q 023191 266 AMIFFRKGVK 275 (286)
Q Consensus 266 G~l~~~~~~~ 275 (286)
|++++++++.
T Consensus 254 G~~~~~~~~~ 263 (394)
T PRK06836 254 GYIAVNPEME 263 (394)
T ss_pred EEEecCHHHh
Confidence 9999987653
No 128
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.80 E-value=1.7e-18 Score=155.92 Aligned_cols=207 Identities=18% Similarity=0.145 Sum_probs=140.1
Q ss_pred cCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
+.++|..+++ +.++++++++.+++.. |..+++..... .+...+...+++.++++++.+. .|++++|+.
T Consensus 17 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~---~g~~~~~~~l~~~la~~~~~~~-----~i~~~~G~~ 87 (360)
T TIGR00858 17 RLLNFSSNDYLGLASHPEVIQAAQQGAEQ-YGAGSTASRLV---SGNSPLHEELEEELAEWKGTEA-----ALLFSSGYL 87 (360)
T ss_pred eEEecccCCcccCCCCHHHHHHHHHHHHh-cCCCCCCcCcc---cCCcHHHHHHHHHHHHHhCCCC-----EEEECchHH
Confidence 5688888764 2468999999988754 33333221111 1112333445577777777532 599999987
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIV 200 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~---~tk~v~ 200 (286)
++..++.+++++||+|++.++.|.++.. .+...|..++.++ .+|++++++.+++. ++++|+
T Consensus 88 ~~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--------~~d~~~l~~~~~~~~~~~~~~v~ 151 (360)
T TIGR00858 88 ANVGVISALVGKGDLILSDALNHASLID--------GCRLSGARVRRYR--------HNDVEHLERLLEKNRGERRKLIV 151 (360)
T ss_pred HHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCCceEEec--------CCCHHHHHHHHHHcccCCCeEEE
Confidence 6555778889999999999966665533 3334554443332 25889999988752 467777
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC----CCCC--CcceEEEeCCCCCCCCCCceEEEEec
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPF--EYADVVTTTTHKSLRGPRGAMIFFRK 272 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~--~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (286)
++ ..| +|...++++|.++|+++|+++|+|++|+.+....... ...+ .+.|+++.|++|+|++ .||++++++
T Consensus 152 ~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~gG~~~~~~ 230 (360)
T TIGR00858 152 TDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS-YGAYVAGSQ 230 (360)
T ss_pred EeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc-cCcEEEcCH
Confidence 76 333 6678899999999999999999999998765432200 0111 1478999999998854 679999888
Q ss_pred chhhhhc
Q 023191 273 GVKEINK 279 (286)
Q Consensus 273 ~~~~~~~ 279 (286)
++.+..+
T Consensus 231 ~~~~~~~ 237 (360)
T TIGR00858 231 ALIDYLI 237 (360)
T ss_pred HHHHHHH
Confidence 7766543
No 129
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.80 E-value=5.5e-19 Score=159.81 Aligned_cols=202 Identities=16% Similarity=0.139 Sum_probs=142.2
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|+.|+|+ +|+.+++++.+.+.... .|+. .+..+|+ +.++++++++++ +|++|+|++
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~-------~g~~~Lr----~aia~~~~~~~~----~I~vt~Gs~e 92 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPD-------GGATTLR----QTIANKLHVKME----QVLCGSGLDE 92 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCC-------CCHHHHH----HHHHHHhCCCcc----eEEECCCHHH
Confidence 56899999985 68899999987654311 1322 3444555 666667788875 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..+++++++|||+|++++ |.|+.|...+...|.+++.++ .+ ++.+|++++++.+++ ++++++++
T Consensus 93 ~i~~~~~~l~~~gd~vlv~~--------P~y~~~~~~~~~~g~~v~~v~--~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (366)
T PRK01533 93 VIQIISRAVLKAGDNIVTAG--------ATFPQYRHHAIIEGCEVKEVA--LN--NGVYDLDEISSVVDN-DTKIVWICN 159 (366)
T ss_pred HHHHHHHHhcCCCCEEEEcC--------CcHHHHHHHHHHcCCEEEEee--cC--CCCcCHHHHHHHhCc-CCcEEEEeC
Confidence 87778999999999999999 666655556667787666665 33 357999999999877 89999998
Q ss_pred CCC-CCCccCHHHHHHHH---HhcCCEEEEeccccccccccCCCCCCC---C--cceEEEeCCCCCCC--CCCceEEEEe
Q 023191 203 ASA-YARLYDYERIRKVC---NKQKAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLR--GPRGAMIFFR 271 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia---~~~~~~vivD~a~~~g~~~~~~~~~~~---~--~~D~v~~s~~K~l~--gp~gG~l~~~ 271 (286)
|+| +|...+.+++.+++ ++++ ++|+|++++ .....+.....+ . ..-+++.|++|.|+ |.+-|+++++
T Consensus 160 P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~ 237 (366)
T PRK01533 160 PNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH 237 (366)
T ss_pred CCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC
Confidence 766 77777766555554 4555 677899975 333211111111 1 13478999999874 4555999998
Q ss_pred cchhhhhcc
Q 023191 272 KGVKEINKQ 280 (286)
Q Consensus 272 ~~~~~~~~~ 280 (286)
.++.+..++
T Consensus 238 ~~~~~~l~~ 246 (366)
T PRK01533 238 EELIEKLNV 246 (366)
T ss_pred HHHHHHHHH
Confidence 877765553
No 130
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.80 E-value=1.1e-18 Score=159.78 Aligned_cols=208 Identities=17% Similarity=0.184 Sum_probs=141.3
Q ss_pred HcCceecCCCCC---CC----HHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe
Q 023191 46 WKGLELIPSENF---TS----VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS 118 (286)
Q Consensus 46 ~~~i~L~~~e~~---~~----~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~ 118 (286)
.+.++|..++.+ .+ ..+.+++..++... ...|+++.+..+|| +.+++++|.+. +++
T Consensus 11 ~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~g-------d~~Y~~~~g~~~Le----eaia~~~g~~~------vv~ 73 (431)
T cd00617 11 YNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLG-------DEAYAGSKSFYDLE----DAVQDLFGFKH------IIP 73 (431)
T ss_pred CCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhC-------CCccCCCCCHHHHH----HHHHHHHCCCe------EEE
Confidence 356777777662 12 24444444444331 11256667888888 55566677764 777
Q ss_pred CCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-------CCCCCCHHHHHHH
Q 023191 119 LSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-------STGYIDYDQLEKS 190 (286)
Q Consensus 119 ~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-------~~~~~d~e~l~~~ 190 (286)
++|++ ++.++++++++|||+| +++ |.|..+...+...|..++.++++... ..+.+|+++|++.
T Consensus 74 t~~Gt~Al~la~~al~~pGD~V-~~~--------~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~ 144 (431)
T cd00617 74 THQGRGAENILFSILLKPGRTV-PSN--------MHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKL 144 (431)
T ss_pred cCCHHHHHHHHHHHhCCCCCEE-ccC--------CcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHH
Confidence 77777 8888999999999987 466 44444444566778777666543211 1245999999999
Q ss_pred hhhc---CCcEEEEc-CCC-C-CCcc---CHHHHHHHHHhcCCEEEEeccccccccc------cCCCCCC--------CC
Q 023191 191 ATLF---RPKLIVAG-ASA-Y-ARLY---DYERIRKVCNKQKAIMLADMAHISGLVA------AGVIPSP--------FE 247 (286)
Q Consensus 191 i~~~---~tk~v~i~-~~n-~-g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~------~~~~~~~--------~~ 247 (286)
+++. ++++|+++ ++| + |... ++++|.++|++||++||.|+||..+... .+..... +.
T Consensus 145 I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s 224 (431)
T cd00617 145 IDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFS 224 (431)
T ss_pred hCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhc
Confidence 9862 37888887 666 4 5554 4668899999999999999998765221 1111111 12
Q ss_pred cceEEEeCCCCCCCCCCceEEEEecc-hhhhhc
Q 023191 248 YADVVTTTTHKSLRGPRGAMIFFRKG-VKEINK 279 (286)
Q Consensus 248 ~~D~v~~s~~K~l~gp~gG~l~~~~~-~~~~~~ 279 (286)
++|.+++|++|.+.+|.||+++++++ +....+
T Consensus 225 ~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~ 257 (431)
T cd00617 225 YADGCTMSAKKDGLVNIGGFLALRDDELYEEAR 257 (431)
T ss_pred cCCEEEEEeecCCCCccceEEEeCcHHHHHHHH
Confidence 58999999999999999999999984 655444
No 131
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=9.9e-19 Score=157.71 Aligned_cols=204 Identities=13% Similarity=0.097 Sum_probs=140.1
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +|+.+.+++.+.+... .+|+. .+..+|+ +.++++++++++ +|++|+|++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~-------~~~~~lr----~~ia~~~~~~~~----~I~it~G~~~ 93 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAERV--HSYPK-------ASHADLT----AALADRWDVSPE----QVWLANGGDG 93 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhh--hcCCC-------CCHHHHH----HHHHHHhCCCcc----eEEECCCHHH
Confidence 57999998884 6888888887765431 13332 2344555 555666688775 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..+++++++|||.|++++ |.|..+...+...|..++.++++.+ +++.+|++++++.. + ++|+|+++
T Consensus 94 al~~~~~~~~~~gd~V~v~~--------P~y~~~~~~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~-~-~~k~i~l~~ 162 (357)
T PRK14809 94 ALDYLARAMLDPGDTVLVPD--------PGFAYYGMSARYHHGEVREYPVSKA-DDFEQTADTVLDAY-D-GERIVYLTS 162 (357)
T ss_pred HHHHHHHHhcCCCCEEEEeC--------CChHHHHHHHHHcCCeEEEEecccC-cCCCcCHHHHHHhh-c-CCcEEEEeC
Confidence 87778899999999999999 5544444344566766766765432 45788888887765 3 68999998
Q ss_pred CCC-CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCCceEEEEecchh
Q 023191 203 ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRKGVK 275 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l~--gp~gG~l~~~~~~~ 275 (286)
|+| +|...+.+++.++++.. ++++|+|+++.. ..........+. ..-+++.|++|.|+ |.+-|++++++++.
T Consensus 163 p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~ 241 (357)
T PRK14809 163 PHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGE-FAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWA 241 (357)
T ss_pred CCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhh-ccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHH
Confidence 666 77888877777776653 789999999653 221110000011 12367899999885 55669999998776
Q ss_pred hhhc
Q 023191 276 EINK 279 (286)
Q Consensus 276 ~~~~ 279 (286)
+..+
T Consensus 242 ~~~~ 245 (357)
T PRK14809 242 DAYA 245 (357)
T ss_pred HHHH
Confidence 5554
No 132
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.80 E-value=3.2e-18 Score=155.14 Aligned_cols=198 Identities=15% Similarity=0.130 Sum_probs=134.1
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~--- 133 (286)
+.+.+.+++..++.... +.++ .|. +..++++.+++++++++|++.+ ++++++|++ ++..++.++.
T Consensus 32 ~~~~~~~a~~~~~~~~~--~~~~--~~~---~~~~~~~~~~~~la~~~g~~~~----~~~~~~g~~~~~~~~~~~~~~~~ 100 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNL--GDPG--LFP---GTKKIEEEVVGSLGNLLHLPDA----YGYIVSGGTEANIQAVRAAKNLA 100 (373)
T ss_pred chHHHHHHHHHHhhcCC--CCcc--cCc---cHHHHHHHHHHHHHHHhCCCCC----CeEEeccHHHHHHHHHHHHHHHH
Confidence 44555777766654321 2222 122 3456677889999999999764 367777777 7665665553
Q ss_pred ---CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCc-EEEEcCCC-CCC
Q 023191 134 ---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK-LIVAGASA-YAR 208 (286)
Q Consensus 134 ---~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk-~v~i~~~n-~g~ 208 (286)
.+||+|+++++.|.++. ..+...|.+++.+++ + +++.+|++++++.+.+ +++ +++++++| +|.
T Consensus 101 ~~~~~g~~vl~~~~~h~~~~--------~~~~~~G~~~~~v~~--~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~tG~ 168 (373)
T TIGR03812 101 REEKRTPNIIVPESAHFSFE--------KAAEMLGLELRYAPL--D-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTELGQ 168 (373)
T ss_pred hccCCCcEEEECCcchHHHH--------HHHHHcCCeEEEEee--C-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCCCc
Confidence 47899999996665532 244566776766653 4 4678999999999987 664 45555555 788
Q ss_pred ccCHHHHHHHHHhcCCEEEEeccccccccccC---CC--C--CCCCcceEEEeCCCCCCCCCCc-e-EEEEecchhhhh
Q 023191 209 LYDYERIRKVCNKQKAIMLADMAHISGLVAAG---VI--P--SPFEYADVVTTTTHKSLRGPRG-A-MIFFRKGVKEIN 278 (286)
Q Consensus 209 ~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~~--~--~~~~~~D~v~~s~~K~l~gp~g-G-~l~~~~~~~~~~ 278 (286)
..|+++|.++|+++|+++++|+||+.+..... .. . ....++|++++++|||+.+|.+ | +++.++++.+..
T Consensus 169 ~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l 247 (373)
T TIGR03812 169 IDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYL 247 (373)
T ss_pred cCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhh
Confidence 89999999999999999999999986654311 11 1 1112589999999998766644 5 444555655443
No 133
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.80 E-value=9e-19 Score=172.52 Aligned_cols=171 Identities=15% Similarity=0.080 Sum_probs=134.5
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-----HHHHHHHHhcCC-CC----eEEeccCCCCcccCccccc
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-----SNFQVYTALLKP-HD----RIMALDLPHGGHLSHGYQT 156 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-----a~~~~l~a~~~~-Gd----~Vl~~~~~~~~~~~~~~~~ 156 (286)
.++..++-..+++++++++|.+. |.++.+++ ++..+++++.++ || +|+++..+|+++..++.
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~~~------v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~-- 634 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGFDS------FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA-- 634 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCe------EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH--
Confidence 35667777889999999999954 66666555 666688888866 88 89999999999987654
Q ss_pred cccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCCCC-CccCHHHHHHHHHhcCCEEEEeccc
Q 023191 157 DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAH 232 (286)
Q Consensus 157 ~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v~i~-~~n~g-~~~~l~~I~~ia~~~~~~vivD~a~ 232 (286)
+.|.+++.++ .+ +++.+|+++|++++++ .+|++|+++ ++|.+ ...|+++|+++||++|+++++|+||
T Consensus 635 ------~~G~~vv~v~--~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq 705 (993)
T PLN02414 635 ------MCGMKIVVVG--TD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGAN 705 (993)
T ss_pred ------HCCCEEEEec--cC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecC
Confidence 4576676676 44 5689999999999985 267888887 77765 6778999999999999999999999
Q ss_pred cccccccCC-CCCCCCcceEEEeCCCCCCCCCC-----c-eEEEEecchhhh
Q 023191 233 ISGLVAAGV-IPSPFEYADVVTTTTHKSLRGPR-----G-AMIFFRKGVKEI 277 (286)
Q Consensus 233 ~~g~~~~~~-~~~~~~~~D~v~~s~~K~l~gp~-----g-G~l~~~~~~~~~ 277 (286)
..+...... ... ++|++++|+||||++|. | |++++++.+...
T Consensus 706 ~~a~~~l~~p~~~---GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~ 754 (993)
T PLN02414 706 MNAQVGLTSPGFI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF 754 (993)
T ss_pred HHhccCcCCcccc---CCCEEEecCCccCCcCcccCCCCeeeEEEchhhccc
Confidence 887644222 122 59999999999997554 4 999999876644
No 134
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.80 E-value=9.5e-19 Score=156.80 Aligned_cols=186 Identities=19% Similarity=0.183 Sum_probs=131.5
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHD 137 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd 137 (286)
.|.++++..+.+.. | + +..++.+.+++.+++++|++++ ++++++|+. ++..++.++++|||
T Consensus 35 ~~~~~~~~~~~~~~-~--~-----------g~~~~~~~Le~~lA~~~g~~~e----~ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 35 GFKIDEEDLELLET-Y--V-----------GPAIFEEKVQELGREHLGGPEE----KILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred ChhHHHHHHHHHHH-h--c-----------CCHHHHHHHHHHHHHHcCCCcc----eEEEECCHHHHHHHHHHHhCCCCC
Confidence 68888888777755 3 1 1125556677999999999765 488888888 99989999999999
Q ss_pred eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCc---cCHH
Q 023191 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARL---YDYE 213 (286)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n~g~~---~~l~ 213 (286)
+|+++.++.+ .|..+..++.+.|.++ +. . .|+++++. .+ ++++|+++ .++.|.+ .+++
T Consensus 97 ~Vli~~~d~p-----~~~s~~~~~~l~ga~~--~~--~------~~l~~l~~--~~-~~~lIiitg~s~~G~v~~~~~L~ 158 (346)
T TIGR03576 97 KVVHYLPEKP-----AHPSIPRSCKLAGAEY--FE--S------DELSELKK--ID-GTSLVVITGSTMDLKVVSEEDLK 158 (346)
T ss_pred EEEECCCCCC-----CchhHHHHHHHcCCEE--ec--c------CCHHHHhh--Cc-CceEEEEECCCCCCcccCHHHHH
Confidence 9998644333 2333333555666543 21 1 24555432 23 68888887 4446654 6899
Q ss_pred HHHHHHHhcCCEEEEecccccccccc-CCCCCCCCcceEEEeCCCCCCCCCCceEEEEecchhhhhcc
Q 023191 214 RIRKVCNKQKAIMLADMAHISGLVAA-GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 214 ~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~~ 280 (286)
+|+++|+++|++|++|+||+.|.... +.....-.++|+++.|++|+++|+++|++++++++.+.+++
T Consensus 159 ~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r~G~v~~~~~li~~l~~ 226 (346)
T TIGR03576 159 RVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPRGGLLAGRKELVDKIKS 226 (346)
T ss_pred HHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccceEEEEeCHHHHHHHHH
Confidence 99999999999999999998765421 11110001478999999999999999999999998877764
No 135
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.80 E-value=1.9e-18 Score=156.21 Aligned_cols=223 Identities=13% Similarity=0.037 Sum_probs=148.8
Q ss_pred ccccccccChHHHHHHHHHHHHH-HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHH
Q 023191 23 LNAPLEVVDPEIADIIEHEKARQ-WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (286)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 99 (286)
+++++...+.+.+..+....... .+.++|..+++. .++.+++++.+..... + |+...+..++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~---~------Y~~~~G~~~lr~~ia~ 73 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADAP---G------YPTTAGTPELREAIVG 73 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhC---C------CCCccCCHHHHHHHHH
Confidence 45677777787777776554333 356899888763 3677788876544221 2 3444667899999999
Q ss_pred HHHHHCCCC-CCCcceeEEeCCChH-HHHHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 100 RALEAFRLD-PEKWGVNVQSLSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 100 ~~~~~~g~~-~~~~~~~v~~~sG~~-a~~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
++.+.+|.+ .+. .+|++|+|++ ++..++.++ +++||.|++++|.|+. +...+...|.++..+ +
T Consensus 74 ~l~~~~~~~~~~~--~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~--------~~~~~~~~g~~~~~~--~-- 139 (364)
T PRK07865 74 WLARRRGVTGLDP--AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPT--------YEVGARLAGATVVRA--D-- 139 (364)
T ss_pred HHHHHcCCCCCCc--ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCccc--------HHHHHHhcCCEEEec--C--
Confidence 999888754 322 3699999999 776566777 7999999999955544 333445566544322 1
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC-----
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF----- 246 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~----- 246 (286)
++++++. . ++++|+++ ++| +|...+ +++|.++|+++|+++|+|+++..- ...+.....+
T Consensus 140 ------~~~~l~~---~-~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~-~~~~~~~~~~~~~~~ 208 (364)
T PRK07865 140 ------SLTELGP---Q-RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLEL-GWDAEPVSILDPRVC 208 (364)
T ss_pred ------ChhhCCc---c-cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhh-ccCCCCCcccccccc
Confidence 2233322 3 78999997 666 675554 678889999999999999997632 2111111101
Q ss_pred --C-cceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 247 --E-YADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 247 --~-~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
. ...+++.|++|.|+ |.+.|++++++++.+..+
T Consensus 209 ~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~ 246 (364)
T PRK07865 209 GGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELL 246 (364)
T ss_pred CCccceEEEEeechhccCCCceeeEEEecCHHHHHHHH
Confidence 0 13488999999874 566799999887665544
No 136
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=1.7e-18 Score=157.23 Aligned_cols=211 Identities=10% Similarity=0.028 Sum_probs=146.1
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCC-CCCCCCCcccCCcchHHHHHHHHHHHHHHHCC----CCCCCcceeEEeC
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKY-SEGYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQSL 119 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~~~~~v~~~ 119 (286)
+.++|+.|+++ +|+.+++++.+.+.... ..+| +. .+..+|++++.+++.+.++ ++++ +|++|
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~----~I~it 97 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRY------PD-GGHEALKQAIAEYVNESAAGSSQITPA----NISVG 97 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCC------CC-CchHHHHHHHHHHhCccccccCCCCHH----HEEEc
Confidence 46889989885 68899999987665421 1122 22 4567888888888876653 5553 59999
Q ss_pred CChH-HHHHHHHHhcCCCC-eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh---c
Q 023191 120 SGSP-SNFQVYTALLKPHD-RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---F 194 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~---~ 194 (286)
+|++ ++..++.+++.+|| .|++++ |+|..|...+...|.+++.++ .+.+++.+|++++++++.+ .
T Consensus 98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~--------P~y~~~~~~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~~~~~~~~ 167 (374)
T PRK02610 98 NGSDELIRSLLIATCLGGEGSILVAE--------PTFSMYGILAQTLGIPVVRVG--RDPETFEIDLAAAQSAIEQTQNP 167 (374)
T ss_pred CChHHHHHHHHHHHcCCCCCeEEEcC--------CChHHHHHHHHHcCCEEEEec--CCcccCCCCHHHHHHHHHhhcCC
Confidence 9999 77667788888886 899999 666555556677787665554 4544689999999998874 4
Q ss_pred CCcEEEEc-CCC-CCCccCHHHHHHHHH-hcCCEEEEeccccccccccCCCCCCCCc--ceEEEeCCCCCC--CCCCceE
Q 023191 195 RPKLIVAG-ASA-YARLYDYERIRKVCN-KQKAIMLADMAHISGLVAAGVIPSPFEY--ADVVTTTTHKSL--RGPRGAM 267 (286)
Q Consensus 195 ~tk~v~i~-~~n-~g~~~~l~~I~~ia~-~~~~~vivD~a~~~g~~~~~~~~~~~~~--~D~v~~s~~K~l--~gp~gG~ 267 (286)
++|+|+++ |+| +|...+.+++.++++ .+++++|+|+++.. ...... ...+.. .-+++.|++|+| .|.|-|+
T Consensus 168 ~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~-~~~~~~-~~~~~~~~~~ivi~SfSK~~g~~GlRiG~ 245 (374)
T PRK02610 168 PVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFE-FSQTTL-VGELAQHPNWVILRTFSKAFRLAAHRVGY 245 (374)
T ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccc-cCccch-HHHHhcCCCEEEEEecchhccCcccceee
Confidence 89999997 666 777777666555543 14899999999642 111000 001111 236789999987 4556699
Q ss_pred EEEecchhhhhcc
Q 023191 268 IFFRKGVKEINKQ 280 (286)
Q Consensus 268 l~~~~~~~~~~~~ 280 (286)
+++++++.+..++
T Consensus 246 ~v~~~~l~~~l~~ 258 (374)
T PRK02610 246 AIGHPELIAVLEK 258 (374)
T ss_pred eecCHHHHHHHHH
Confidence 9998887766554
No 137
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.79 E-value=2.2e-18 Score=154.44 Aligned_cols=207 Identities=21% Similarity=0.248 Sum_probs=157.9
Q ss_pred cCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
+.+||..++= .-.|.+++++.+.+.. |..|..+.+. .+..+...+|| +.+++++|.+. .++++||-
T Consensus 40 ~~~nf~SNdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~-----al~f~SGy 109 (388)
T COG0156 40 KVLNFCSNDYLGLASHPELIEAAKAAIRR-YGVGAGGSRLISGTSDLHVELE----EELADFLGAEA-----ALLFSSGF 109 (388)
T ss_pred eeEeeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEEcccc
Confidence 4577764443 1378899999998876 4345555553 44445556677 88888999875 59999999
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--C---Cc
Q 023191 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--R---PK 197 (286)
Q Consensus 123 ~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~---tk 197 (286)
.+|..++.++++++|.|+.....|.+... ++.+.+.+.+.. .. .|+++|++++.+. . .+
T Consensus 110 ~AN~~~i~~l~~~~dli~~D~lnHASiid--------G~rls~a~~~~f--~H------nD~~~Le~~l~~~~~~~~~~~ 173 (388)
T COG0156 110 VANLGLLSALLKKGDLIFSDELNHASIID--------GIRLSRAEVRRF--KH------NDLDHLEALLEEARENGARRK 173 (388)
T ss_pred hhHHHHHHHhcCCCcEEEEechhhhhHHH--------HHHhCCCcEEEe--cC------CCHHHHHHHHHhhhccCCCce
Confidence 99999999999999999999988888654 555666554333 22 4889999999762 1 35
Q ss_pred EEEEc--CCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccC---CC-CCCCC--cceEEEeCCCCCCCCCCceEEE
Q 023191 198 LIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---VI-PSPFE--YADVVTTTTHKSLRGPRGAMIF 269 (286)
Q Consensus 198 ~v~i~--~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~~-~~~~~--~~D~v~~s~~K~l~gp~gG~l~ 269 (286)
+|++. +|+.|.+.|+++|.+++++|++++++|+||+.|.+... .. ..++. .+|++++++.|.|+ -.||++.
T Consensus 174 ~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v~ 252 (388)
T COG0156 174 LIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYIA 252 (388)
T ss_pred EEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccCceee
Confidence 56654 89999999999999999999999999999999988631 11 11222 26899999999996 5789999
Q ss_pred Eecchhhhhcc
Q 023191 270 FRKGVKEINKQ 280 (286)
Q Consensus 270 ~~~~~~~~~~~ 280 (286)
++..+.|+++.
T Consensus 253 g~~~~~d~L~~ 263 (388)
T COG0156 253 GSAALIDYLRN 263 (388)
T ss_pred CcHHHHHHHHH
Confidence 99999999884
No 138
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.79 E-value=3.5e-18 Score=158.10 Aligned_cols=219 Identities=12% Similarity=0.079 Sum_probs=147.3
Q ss_pred cCceecCCCCCC-CHHHHHHhcccccc-C----CCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC----CCCCCcceeE
Q 023191 47 KGLELIPSENFT-SVSVMQAVGSVMTN-K----YSEGYPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNV 116 (286)
Q Consensus 47 ~~i~L~~~e~~~-~~~v~~a~~~~l~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~~~~~v 116 (286)
+.|+|...||.+ .+.+.+.+.+...- . +........+|.+..+...|++++.+++.+++| ++++ +|
T Consensus 48 g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~----~I 123 (447)
T PLN02607 48 GVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD----RI 123 (447)
T ss_pred ceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH----He
Confidence 469999999964 56666666553321 0 000111223466677889999999999998877 3553 69
Q ss_pred EeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccc-cceeeeEEEecccCC-CCCCCCHHHHHHHhhh
Q 023191 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNE-STGYIDYDQLEKSATL 193 (286)
Q Consensus 117 ~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~ 193 (286)
++|+|++ ++.+++.++++|||.|+++.|.|+++.. .+. ..|.+++.+ +.+. +++.+|++++++++.+
T Consensus 124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~--------~~~~~~g~~vv~v--~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTGVKIVPI--HCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCcEEEEE--eCCCCCCCcCCHHHHHHHHHH
Confidence 9999999 8877888899999999999966555432 222 245444444 4442 4568999999998864
Q ss_pred -----cCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC-----------CCCcceEE
Q 023191 194 -----FRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-----------PFEYADVV 252 (286)
Q Consensus 194 -----~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-----------~~~~~D~v 252 (286)
.++|+|+++ |+| +|.+.+ +++|.++|++|++.+|+|++++........... .....-++
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~v 273 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHI 273 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEE
Confidence 378899887 777 776665 778899999999999999996543222111110 00112266
Q ss_pred EeCCCCCCC--CCCceEEEE-ecchhhhhc
Q 023191 253 TTTTHKSLR--GPRGAMIFF-RKGVKEINK 279 (286)
Q Consensus 253 ~~s~~K~l~--gp~gG~l~~-~~~~~~~~~ 279 (286)
+.|++|.|+ |-|-|+++. ++++....+
T Consensus 274 i~s~SK~fg~~GlRvG~ivs~n~~l~~~~~ 303 (447)
T PLN02607 274 VYSLSKDLGLPGFRVGTIYSYNDKVVTTAR 303 (447)
T ss_pred EEcchhcCCCCcceEEEEEEcCHHHHHHHH
Confidence 899999874 445599998 455655443
No 139
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=9.5e-19 Score=157.49 Aligned_cols=199 Identities=19% Similarity=0.197 Sum_probs=140.7
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +++.+++++.+.+.+.. ..|+. . +..+++ +.++++++++++ +|++|+|++
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~------~-~~~~lr----~aia~~~~~~~~----~I~it~G~~~ 88 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPD------P-NADALR----QAIAAYYGLDPE----QVFVGNGSDE 88 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCC------C-cHHHHH----HHHHHHhCCCHH----HEEEcCCHHH
Confidence 56899998884 47889999987665311 12322 1 224455 667777788775 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.++++++++|||+|++++ |.|+.+...+...|.+++.++ .+ +++.+|++++++ ++++|+++
T Consensus 89 al~~~~~~l~~~gd~vlv~~--------P~y~~~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~-----~~~~v~~~~ 152 (353)
T PRK05387 89 VLAHAFLAFFNHDRPLLFPD--------ITYSFYPVYAGLYGIPYEEIP--LD-DDFSIDVEDYLR-----PNGGIIFPN 152 (353)
T ss_pred HHHHHHHHhcCCCCEEEEeC--------CCHHHHHHHHHHcCCEEEEee--cC-CCCCCCHHHHHh-----cCCEEEEeC
Confidence 88878999999999999999 555444444556776666565 44 467899998863 45777776
Q ss_pred CCC-CCCccCHHHHHHHHHhc-CCEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCC--CCCCceEEEEecchhh
Q 023191 203 ASA-YARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKE 276 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l--~gp~gG~l~~~~~~~~ 276 (286)
|+| +|...+.+++.++++++ ++++|+|++|.. . .......... ...+++.|++|.| .|.+.|+++.+.++.+
T Consensus 153 P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~-~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~ 230 (353)
T PRK05387 153 PNAPTGIALPLAEIERILAANPDSVVVIDEAYVD-F-GGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIE 230 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccc-c-CCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHH
Confidence 777 78899999999999876 999999999741 1 1110000001 2458899999986 4666699999888776
Q ss_pred hhc
Q 023191 277 INK 279 (286)
Q Consensus 277 ~~~ 279 (286)
..+
T Consensus 231 ~l~ 233 (353)
T PRK05387 231 ALN 233 (353)
T ss_pred HHH
Confidence 554
No 140
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.79 E-value=5.4e-18 Score=155.01 Aligned_cols=225 Identities=14% Similarity=0.114 Sum_probs=146.1
Q ss_pred cccChHHHHHHHHHHHH--HHcCceecCCC---C--CCC--HHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHH
Q 023191 28 EVVDPEIADIIEHEKAR--QWKGLELIPSE---N--FTS--VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (286)
Q Consensus 28 ~~~~~~~~~~~~~~~~~--~~~~i~L~~~e---~--~~~--~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (286)
...+++.+..+....+. ..+.++|..|. + .+| +.+.+++.+.+.... ...|+...+..++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~------~~~Y~~~~G~~~lR~aia 79 (396)
T PRK09257 6 EAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETET------TKNYLPIEGLAAYRQAVQ 79 (396)
T ss_pred CCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhccccc------CCCcCCCCCCHHHHHHHH
Confidence 34444444444443332 23678998874 2 223 678888777654321 112566678899999999
Q ss_pred HHHHHHCCC--CCCCcceeEEeCCChH-HHHHHHHHh--cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 99 KRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 99 ~~~~~~~g~--~~~~~~~~v~~~sG~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
+++.+..+. ++++ .+|++|+|++ ++.++++++ ++|||+|++++ |+|+.|...+...|.+++.+|+
T Consensus 80 ~~~~~~~~~~~~~~~--i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~--------P~y~~~~~~~~~~g~~~v~v~~ 149 (396)
T PRK09257 80 ELLFGADSPALAAGR--VATVQTPGGTGALRVGADFLKRAFPDAKVWVSD--------PTWPNHRAIFEAAGLEVKTYPY 149 (396)
T ss_pred HHhcCCCCcccccCe--EEEEecCCccHHHHHHHHHHHHhCCCCeEEECC--------CCcccHHHHHHHcCCcEEEEec
Confidence 998766543 4432 1239999999 777676555 58999999999 6666555566778877766664
Q ss_pred ccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccccccc-CCCCCC
Q 023191 174 RLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-GVIPSP 245 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~~~ 245 (286)
. +.+++.+|++++++.+... ++++++++ ++| +|...+ +++|+++|++|++++|+|+++. ..... +.....
T Consensus 150 ~-~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~~~ 227 (396)
T PRK09257 150 Y-DAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQ-GFGDGLEEDAYG 227 (396)
T ss_pred c-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc-ccccchHHHHHH
Confidence 2 3345789999999988642 34445556 666 775544 7788999999999999999954 22211 000000
Q ss_pred ---CC---cceEEEeCCCCCCC--CCCceEEEE
Q 023191 246 ---FE---YADVVTTTTHKSLR--GPRGAMIFF 270 (286)
Q Consensus 246 ---~~---~~D~v~~s~~K~l~--gp~gG~l~~ 270 (286)
+. ..-+++.|++|+|+ |.|-|++++
T Consensus 228 ~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 228 LRAFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred HHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 00 12377999999885 666699874
No 141
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.79 E-value=3.3e-18 Score=155.32 Aligned_cols=187 Identities=13% Similarity=0.097 Sum_probs=132.6
Q ss_pred CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-cC
Q 023191 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LK 134 (286)
Q Consensus 57 ~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~-~~ 134 (286)
..+++.++++.+.+.+.+. ++.. .+++++.+++++++|.+. +++++|++ ++.+++.++ ++
T Consensus 8 ~~~~~~~~~~~~~l~~~~~--------~g~~----~~~~~~e~~la~~~g~~~------~v~~~sgt~al~~~l~~~~~~ 69 (375)
T PRK11706 8 PVVGTELDYIQQAMSSGKL--------CGDG----GFTRRCQQWLEQRFGSAK------VLLTPSCTAALEMAALLLDIQ 69 (375)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCCC----HHHHHHHHHHHHHhCCCe------EEEECCHHHHHHHHHHHhCCC
Confidence 3456667778777765321 1111 334455578888888753 77777777 765566655 79
Q ss_pred CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHH
Q 023191 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYER 214 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~ 214 (286)
|||+|+++.+.|.++.. .+...|.+++.+ +++++++.+|++++++++++ +||+|+++ +.+|...++++
T Consensus 70 ~Gd~Viv~~~t~~~~~~--------~~~~~G~~~v~~--d~d~~~~~~d~~~le~~i~~-~tk~i~~~-~~~G~~~~~~~ 137 (375)
T PRK11706 70 PGDEVIMPSYTFVSTAN--------AFVLRGAKIVFV--DIRPDTMNIDETLIEAAITP-KTRAIVPV-HYAGVACEMDT 137 (375)
T ss_pred CCCEEEECCCCcHHHHH--------HHHHcCCEEEEE--ecCCCcCCcCHHHHHHhcCC-CCeEEEEe-CCCCCccCHHH
Confidence 99999999966665543 344667655544 46655678999999999988 89999875 23788889999
Q ss_pred HHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCC--CCCCCCCceEEEEec-chh
Q 023191 215 IRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRK-GVK 275 (286)
Q Consensus 215 I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~gp~gG~l~~~~-~~~ 275 (286)
|.++|+++|++||+|++|+.|....+.... ...|+.++|+| |.++.+.||++++++ ++.
T Consensus 138 i~~la~~~~i~vIeD~a~a~g~~~~~~~~g--~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~ 199 (375)
T PRK11706 138 IMALAKKHNLFVVEDAAQGVMSTYKGRALG--TIGHIGCFSFHETKNYTAGEGGALLINDPALI 199 (375)
T ss_pred HHHHHHHcCCEEEEECccccccccCCeeee--cCcCEEEEeCCCCccccccCCeEEEECCHHHH
Confidence 999999999999999999988743222111 13688888888 999766667777765 344
No 142
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.79 E-value=1.8e-18 Score=161.18 Aligned_cols=205 Identities=16% Similarity=0.190 Sum_probs=134.7
Q ss_pred cCceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC---CCCCcceeEEeCCCh
Q 023191 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL---DPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~---~~~~~~~~v~~~sG~ 122 (286)
+.++|..+++ +.+++.+.++.+.+... +|+ .+.......++.+.+++++.++. +.++ .+|++|+|+
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~---~Y~-----~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~--~~V~it~Ga 164 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGIIGD---NYP-----VPDRMLPHSEKIVHQYLIQEMCGNKPPPGE--FDLFAVEGG 164 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhhcC---CCC-----CCCCCHHHHHHHHHHHHHhhccCCCCCCCc--CeEEEeCCH
Confidence 4588888877 34555566666654221 222 12223444555555676666443 2221 269999999
Q ss_pred H-HHHHHHHH-----hcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CC-----CCCCHHHHHHH
Q 023191 123 P-SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-ST-----GYIDYDQLEKS 190 (286)
Q Consensus 123 ~-a~~~~l~a-----~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~-----~~~d~e~l~~~ 190 (286)
+ ++..++.+ +++|||+|++++ |.|+.|...+.+.+...++++++.+. ++ |.+|+++++++
T Consensus 165 t~al~~~~~~l~~~~ll~pGD~Vlv~~--------P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 165 TAAMCYIFDSLKANELLKKGDKIALMT--------PIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred HHHHHHHHHHHhHhhcCCCCCEEEEeC--------CCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence 9 77767776 789999999999 55555554445553334445444432 12 88999999998
Q ss_pred hhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhc--CCEEEEeccccccccccCCCCCCC---CcceEEEeCCCCCC
Q 023191 191 ATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSL 260 (286)
Q Consensus 191 i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~---~~~D~v~~s~~K~l 260 (286)
+++ ++|+|+++ |+| +|...+ +++|+++|++| +++||+|+++.. ... .. ...+ ...-+++.|++|+|
T Consensus 237 ~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~-f~~-~~-~sl~~~~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 237 RDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGT-FVD-DF-RSLFAELPYNTIGVYSFSKYF 312 (521)
T ss_pred cCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchh-hcc-cc-cchhhhCCCCEEEEEcchhhc
Confidence 876 99999986 777 776655 77888899987 999999999652 221 11 1111 11347899999987
Q ss_pred --CCCCceEEEEecc
Q 023191 261 --RGPRGAMIFFRKG 273 (286)
Q Consensus 261 --~gp~gG~l~~~~~ 273 (286)
.|++-|+++.+++
T Consensus 313 g~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 313 GATGWRLGTIALHKD 327 (521)
T ss_pred cCchhhhhhhhcCch
Confidence 6777799999764
No 143
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.79 E-value=2e-18 Score=157.75 Aligned_cols=166 Identities=14% Similarity=0.168 Sum_probs=123.3
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
.....+|| +.+++++|.+. .+++.+|+.++.+++.++++|||+|+++++.|++++... ...+...|.
T Consensus 63 ~p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~----~~~~~~~G~ 129 (400)
T PRK06234 63 NPTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALL----NHGLTRYGV 129 (400)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHhhCCe
Confidence 34566666 77777778653 366667777877788899999999999997776554321 112334565
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVI 242 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~ 242 (286)
+++.+ +. .|++++++++++ +||+|+++ |+| +|...|+++|.++|+++ ++++++|++++.+...
T Consensus 130 ~v~~v--d~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~---- 196 (400)
T PRK06234 130 EVTFV--DT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ---- 196 (400)
T ss_pred EEEEE--CC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC----
Confidence 45444 22 279999999987 89999997 777 77889999999999997 9999999998766442
Q ss_pred CCCCC-cceEEEeCCCCCCCCCC---ceEEEEecchhhhhc
Q 023191 243 PSPFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINK 279 (286)
Q Consensus 243 ~~~~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~~~~ 279 (286)
.++. ++|++++|++|+++|+. ||++++++++.+.++
T Consensus 197 -~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~ 236 (400)
T PRK06234 197 -RPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVK 236 (400)
T ss_pred -CchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHH
Confidence 1222 59999999999998765 599999887665443
No 144
>PRK09105 putative aminotransferase; Provisional
Probab=99.79 E-value=1.8e-18 Score=156.64 Aligned_cols=200 Identities=18% Similarity=0.116 Sum_probs=140.2
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|+.++++ +|+.+++++.+.+.... .| +.. ...+|+ +.+++++|++++ +|++|+|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--~Y------~~~-~~~~Lr----~aia~~~~v~~e----~I~it~Gs~ 105 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALSG--RY------DLE-LEDDLR----TLFAAQEGLPAD----HVMAYAGSS 105 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHhc--CC------CCc-hHHHHH----HHHHHHhCcChh----hEEEcCChH
Confidence 356889888884 68999999987654311 12 221 244555 566777899875 499999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++..++.+++++||+|++++ |.|..+...+...|.+++.++ .+ +++.+|++++++. .+ ++++++++
T Consensus 106 ~ai~~~~~~l~~~gd~Vli~~--------P~y~~~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~-~~-~~~~v~l~ 172 (370)
T PRK09105 106 EPLNYAVLAFTSPTAGLVTAD--------PTYEAGWRAADAQGAPVAKVP--LR-ADGAHDVKAMLAA-DP-NAGLIYIC 172 (370)
T ss_pred HHHHHHHHHHcCCCCEEEEeC--------CChHHHHHHHHHcCCeEEEec--CC-CCCCCCHHHHHhc-CC-CCCEEEEe
Confidence 88878899999999999999 444444445567777666665 44 4578999999876 44 78999987
Q ss_pred -CCC-CCCccCHHHHHHHHHh--cCCEEEEeccccccccccCCCCCCCC----cce-EEEeCCCCCCC--CCCceEEEEe
Q 023191 203 -ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFE----YAD-VVTTTTHKSLR--GPRGAMIFFR 271 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~~----~~D-~v~~s~~K~l~--gp~gG~l~~~ 271 (286)
|+| +|...+.++|.++++. +++++|+|+++. .... .+.... ..+ +++.|++|+|+ |.+-|+++++
T Consensus 173 nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~-~f~~---~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 248 (370)
T PRK09105 173 NPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYI-HFSD---APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR 248 (370)
T ss_pred CCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchH-Hhcc---CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecC
Confidence 766 7788888888777653 489999999973 2211 111111 133 66789999874 4455999998
Q ss_pred cchhhhhc
Q 023191 272 KGVKEINK 279 (286)
Q Consensus 272 ~~~~~~~~ 279 (286)
+++.+...
T Consensus 249 ~~~i~~l~ 256 (370)
T PRK09105 249 PDLLAKLA 256 (370)
T ss_pred HHHHHHHH
Confidence 87765544
No 145
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.78 E-value=3.8e-18 Score=155.32 Aligned_cols=207 Identities=18% Similarity=0.157 Sum_probs=144.6
Q ss_pred cCceecCCCC--C-CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 47 KGLELIPSEN--F-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~--~-~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
+.++|..++. . +++.+++++.+.+.. +...+. .|....+..++++++++++++++|.+. .+++++|++
T Consensus 34 ~~id~~~~~~~g~~~~~~~~~a~~~~~~~-~~~~~~---~~~~~~g~~~l~~~l~~~l~~~~g~~~-----~i~~~sG~~ 104 (385)
T TIGR01825 34 EVINLSSNNYLGFADHPRLKEAAAQAIQQ-YGVGAG---AVRTIAGTLRLHEELEEKLAKFKKTEA-----ALVFQSGFN 104 (385)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-cCCCCC---ccCcccCCcHHHHHHHHHHHHHhCCCc-----EEEECcHHH
Confidence 5688887652 3 688999999887753 211111 123334556788888899999998643 599999988
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIV 200 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~---~tk~v~ 200 (286)
++..++.+++++||.|++.++.|+++.. .+.+.|..+..+ ..+|++++++.+.+. ++++|+
T Consensus 105 a~~~a~~~~~~~gd~vi~~~~~~~~~~~--------~~~~~g~~~~~~--------~~~d~~~l~~~l~~~~~~~~~~v~ 168 (385)
T TIGR01825 105 TNQGVLSALLRKGDIVLSDELNHASIID--------GLRLTKATKKIY--------KHADMDDLDRVLRENPSYGKKLIV 168 (385)
T ss_pred HHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCCceEEe--------CCCCHHHHHHHHHhhccCCCeEEE
Confidence 7777888899999999999876665532 223344333211 147888888877642 577887
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEecccccccccc-CC---CCCCC-CcceEEEeCCCCCCCCCCceEEEEecc
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GV---IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 273 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~---~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (286)
++ ..| +|...|+++|.++|++||+++|+|++|+.|.... +. ....+ ...|+++.|++|+|+ ..||+++.+++
T Consensus 169 ~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~~~~~~~ 247 (385)
T TIGR01825 169 TDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIG-VVGGYAAGHKE 247 (385)
T ss_pred EecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhh-cCCCEEecCHH
Confidence 76 334 6788899999999999999999999997665431 10 00111 247899999999995 46799988887
Q ss_pred hhhhhc
Q 023191 274 VKEINK 279 (286)
Q Consensus 274 ~~~~~~ 279 (286)
+.+..+
T Consensus 248 ~~~~~~ 253 (385)
T TIGR01825 248 LIEYLK 253 (385)
T ss_pred HHHHHH
Confidence 666554
No 146
>PRK07179 hypothetical protein; Provisional
Probab=99.78 E-value=3.9e-18 Score=156.52 Aligned_cols=194 Identities=14% Similarity=0.182 Sum_probs=134.5
Q ss_pred CHHHHHHhccccccCCCCCCC-CCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYP-GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD 137 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd 137 (286)
.|++++++.+.+...+ .+.. +..+..+.....+|| +.+++++|.+. .+++++|+.++.++++++..+||
T Consensus 70 ~p~v~~a~~~~~~~~~-~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~sG~~An~~~l~~l~~~g~ 139 (407)
T PRK07179 70 HPDIIKAQIAALQEEG-DSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES-----CLLCQSGWAANVGLLQTIADPNT 139 (407)
T ss_pred CHHHHHHHHHHHHHhC-CCCCccccccCCchHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCCCCC
Confidence 6899999999886522 1111 222333333444555 78888888764 35555555588889999999999
Q ss_pred eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHH
Q 023191 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERI 215 (286)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I 215 (286)
.|++..+.|.+... ++...|..+ ++++ ..|++++++++++.++++|+++ +.| +|...|+++|
T Consensus 140 ~v~~~~~~h~s~~~--------~~~~~g~~~--~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I 203 (407)
T PRK07179 140 PVYIDFFAHMSLWE--------GVRAAGAQA--HPFR------HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADI 203 (407)
T ss_pred EEEEECCcCHHHHH--------HHHHCCCeE--EEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHH
Confidence 99998877766532 222344332 3322 2589999999976457888887 444 7889999999
Q ss_pred HHHHHhcCCEEEEeccccccccccC----CCCCCCC-cceEEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 216 RKVCNKQKAIMLADMAHISGLVAAG----VIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 216 ~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~~~-~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
.++|+++|+++|+|++|+.|..... ....++. .+|++++|+||+++ +++|++++++++.+..+
T Consensus 204 ~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~~~~~~~~ 271 (407)
T PRK07179 204 VDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPRELAEYVP 271 (407)
T ss_pred HHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCHHHHHHHH
Confidence 9999999999999999987654211 1111221 47999999999986 46899999988766554
No 147
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=2.4e-18 Score=156.08 Aligned_cols=158 Identities=20% Similarity=0.208 Sum_probs=117.7
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
.....|+ +.++++.|.+ ++++++|++ ++.+++.+++++||+|+++++.|++....... .....|
T Consensus 53 pt~~~Le----~~lA~leg~e------~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~----~~~~~g- 117 (388)
T PRK08861 53 PNRGLLE----QTLSELESGK------GAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNT----RANKGD- 117 (388)
T ss_pred chHHHHH----HHHHHHhCCC------eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHH----HHhcCC-
Confidence 3455555 7788888854 388888888 88878899999999999999777654322110 011123
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
+++..++ ..|++++++++++ +|++|+++ |+| +|.+.|+++|.++|+++|+++++|+++..+... .
T Consensus 118 -i~v~~vd------~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~-----~ 184 (388)
T PRK08861 118 -FKVQFVD------QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQ-----K 184 (388)
T ss_pred -eEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccC-----C
Confidence 2333322 2489999999987 99999997 767 778999999999999999999999998776432 2
Q ss_pred CCC-cceEEEeCCCCCCCCCC---ceEEEEecc
Q 023191 245 PFE-YADVVTTTTHKSLRGPR---GAMIFFRKG 273 (286)
Q Consensus 245 ~~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~ 273 (286)
++. ++|++++|+|||++|+. ||+++++++
T Consensus 185 pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~ 217 (388)
T PRK08861 185 PLELGADFVIHSTTKYINGHSDVIGGVLITKTK 217 (388)
T ss_pred CcccCCCEEEeecceeccCCCcceeEEEEecHH
Confidence 333 69999999999999986 588877653
No 148
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.78 E-value=4.8e-18 Score=152.66 Aligned_cols=161 Identities=19% Similarity=0.218 Sum_probs=119.0
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
+++.+++++|.+. .+++++|+.++..++.++ +++||+|+++.+.|.++.. .+...|.+++.++ +
T Consensus 23 ~~~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~ 87 (352)
T cd00616 23 FEKAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN--------AILLLGATPVFVD--I 87 (352)
T ss_pred HHHHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH--------HHHHcCCeEEEEe--c
Confidence 4477888888642 355555555877788888 6999999999977776543 2334565555554 5
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeC
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 255 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s 255 (286)
+++++.+|++++++.+++ ++++|+++. .+|...|+++|.++|+++|+++|+|++|+.|....+.... ...|+.++|
T Consensus 88 ~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~--~~~d~~~~S 163 (352)
T cd00616 88 DPDTYNIDPELIEAAITP-RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVG--TFGDAGAFS 163 (352)
T ss_pred CCCcCCcCHHHHHHhcCc-CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcc--cCcceeEEc
Confidence 534688999999999976 899998862 3688889999999999999999999999988765432111 126788888
Q ss_pred CC--CCCCCCCceEEEEec-chhh
Q 023191 256 TH--KSLRGPRGAMIFFRK-GVKE 276 (286)
Q Consensus 256 ~~--K~l~gp~gG~l~~~~-~~~~ 276 (286)
+| |+++++.||++++++ ++.+
T Consensus 164 ~~~~K~~~~~~gg~~~~~~~~~~~ 187 (352)
T cd00616 164 FHPTKNLTTGEGGAVVTNDEELAE 187 (352)
T ss_pred CCCCCCCcccCceEEEECCHHHHH
Confidence 65 999888889888875 4443
No 149
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.78 E-value=9.6e-18 Score=154.63 Aligned_cols=209 Identities=17% Similarity=0.263 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHcCceecCCCCC-------CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHC
Q 023191 33 EIADIIEHEKARQWKGLELIPSENF-------TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (286)
Q Consensus 33 ~~~~~~~~~~~~~~~~i~L~~~e~~-------~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 105 (286)
.++.+..++.........|..+++. .++...+++.+.+...+. . ++ ....++| +.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~--~-----~G--~~~~~fe----~~lA~~~ 76 (438)
T PRK15407 10 QILELVREYAELAHAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL--T-----TG--RFNDAFE----KKLAEFL 76 (438)
T ss_pred HHHHHHHHHHHHhcccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc--c-----CC--hhHHHHH----HHHHHHh
Confidence 3344444444333345566666662 234444555454433110 0 11 2234555 7778888
Q ss_pred CCCCCCcceeEEeCCChHHHHHHHHHh---------cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 106 RLDPEKWGVNVQSLSGSPSNFQVYTAL---------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 106 g~~~~~~~~~v~~~sG~~a~~~~l~a~---------~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
|.+. .+++++|+.++.+++.++ ++|||+|+++++.|.++.. .+...|..+ ++++++
T Consensus 77 g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~--------~v~~~G~~p--v~vdvd 141 (438)
T PRK15407 77 GVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN--------PIIQNGLVP--VFVDVE 141 (438)
T ss_pred CCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------HHHHcCCEE--EEEecC
Confidence 8764 244445555777677665 5899999999977766543 333456544 444555
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCC
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT 256 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~ 256 (286)
.+++.+|++++++.+++ +||+|+++.. .|...++++|.++|++||++||+|++|+.|....+..... ..|+.++|+
T Consensus 142 ~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~--~gd~~~fSf 217 (438)
T PRK15407 142 LPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGT--FGDIATLSF 217 (438)
T ss_pred CCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeec--cCceEEEeC
Confidence 55788999999999987 8999988632 4566799999999999999999999999998876643322 258777777
Q ss_pred C--CCCCCCCceEEEEecc
Q 023191 257 H--KSLRGPRGAMIFFRKG 273 (286)
Q Consensus 257 ~--K~l~gp~gG~l~~~~~ 273 (286)
| |.+....||+++++++
T Consensus 218 ~~~k~~~~geGG~l~t~d~ 236 (438)
T PRK15407 218 YPAHHITMGEGGAVFTNDP 236 (438)
T ss_pred CCCCCccccCceEEEECCH
Confidence 6 6676666899999875
No 150
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=2.7e-18 Score=156.28 Aligned_cols=159 Identities=19% Similarity=0.195 Sum_probs=118.9
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
....+|| +.+++++|.+. .+.+++|+.++.+++.+++++||+|+++++.|++....... .....|..
T Consensus 61 p~~~~Le----~~lA~~~g~~~-----~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~----~~~~~gi~ 127 (388)
T PRK07811 61 PTRTALE----EQLAALEGGAY-----GRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDK----VFTRWGVE 127 (388)
T ss_pred ccHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHH----hCcCCCeE
Confidence 3455555 77888888876 47788887788889999999999999999777654322110 11122433
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
++.+ + ..|++++++++++ +||+|+++ ++| +|...++++|.++|+++|+++|+|++++.+... .+
T Consensus 128 ~~~~--d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~-----~p 193 (388)
T PRK07811 128 YTPV--D------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQ-----QP 193 (388)
T ss_pred EEEe--C------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccC-----Cc
Confidence 3222 2 2489999999988 89999997 776 678899999999999999999999998766432 12
Q ss_pred CC-cceEEEeCCCCCCCCCC---ceEEEEecc
Q 023191 246 FE-YADVVTTTTHKSLRGPR---GAMIFFRKG 273 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~ 273 (286)
+. ++|++++|++|+++||. ||+++++++
T Consensus 194 ~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~ 225 (388)
T PRK07811 194 LALGADVVVHSTTKYIGGHSDVVGGALVTNDE 225 (388)
T ss_pred hhhCCcEEEecCceeecCCCCcEEEEEEECCH
Confidence 22 59999999999999884 588888653
No 151
>PRK03321 putative aminotransferase; Provisional
Probab=99.78 E-value=1.2e-18 Score=156.91 Aligned_cols=203 Identities=17% Similarity=0.134 Sum_probs=141.7
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..+++. +++.+++++.+++.. . ..|+ ..+..+++ +.++++++++++ +|++++|++
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~-------~~g~~~lr----~~ia~~~~~~~~----~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYP-------DMGAVELR----AALAEHLGVPPE----HVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCC-------CCcHHHHH----HHHHHHhCcCHH----HEEECCCHHH
Confidence 46889888773 678899999876643 1 1232 13455555 666677788764 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.++++|||+|+++.+.|. .+...++..|.+++.++ .+ +++.+|++++++.+++ ++++|+++
T Consensus 86 ~l~~~~~~~~~~gd~Vli~~p~y~--------~~~~~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~~~~-~~~~v~l~~ 153 (352)
T PRK03321 86 LCQQLVQATAGPGDEVIFAWRSFE--------AYPILVQVAGATPVQVP--LT-PDHTHDLDAMAAAITD-RTRLIFVCN 153 (352)
T ss_pred HHHHHHHHhcCCCCEEEeCCCCHH--------HHHHHHHHcCCEEEEcc--CC-CCCCCCHHHHHHhhcc-CCCEEEEeC
Confidence 666677888999999999884443 32223445665555454 44 3478999999999987 89999987
Q ss_pred CCC-CCCccCHHHHHHHHHh--cCCEEEEeccccccccccCCCCCCC---C-c-ceEEEeCCCCCCC--CCCceEEEEec
Q 023191 203 ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF---E-Y-ADVVTTTTHKSLR--GPRGAMIFFRK 272 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~---~-~-~D~v~~s~~K~l~--gp~gG~l~~~~ 272 (286)
++| +|...+.++|.++|++ +++++|+|+++..-.. .+.....+ . . .-+++.|++|.|+ |.+.|++++++
T Consensus 154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVR-DDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhcc-CcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 766 7888999999999987 5899999999653222 11111111 1 1 2366889999885 44569999988
Q ss_pred chhhhhc
Q 023191 273 GVKEINK 279 (286)
Q Consensus 273 ~~~~~~~ 279 (286)
++.+..+
T Consensus 233 ~~~~~~~ 239 (352)
T PRK03321 233 EVIAALR 239 (352)
T ss_pred HHHHHHH
Confidence 7776554
No 152
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=1.8e-18 Score=156.85 Aligned_cols=155 Identities=18% Similarity=0.201 Sum_probs=114.4
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
++++.+++++|.+. .+++++|++++.+++. ++++||+|+++++.|+++...+. ..+...|.+++.++ .
T Consensus 51 ~le~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G~~v~~vd--~ 118 (378)
T TIGR01329 51 ALESLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLT----QVVPRSGVVVVHVD--T 118 (378)
T ss_pred HHHHHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHH----HHHHHcCcEEEEeC--C
Confidence 34488888888843 4777778776664554 78999999999977766543221 01123454444442 2
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEE
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~ 253 (286)
.|++++++++++ +||+|+++ ++| +|.+.|+++|+++|+++|+++|+|++|+.+.....+ .. ++|+++
T Consensus 119 ------~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l-~~---g~Di~v 187 (378)
T TIGR01329 119 ------TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL-EL---GADIVY 187 (378)
T ss_pred ------CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hc---CCcEEE
Confidence 289999999987 99999997 777 778899999999999999999999998766432111 11 599999
Q ss_pred eCCCCCCCCCC---ceEEEEecc
Q 023191 254 TTTHKSLRGPR---GAMIFFRKG 273 (286)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~ 273 (286)
+|+||+++||. +|+++++++
T Consensus 188 ~S~tK~l~G~~~~~~G~v~~~~~ 210 (378)
T TIGR01329 188 HSATKFLAGHSDVMAGVLAVKGE 210 (378)
T ss_pred EecceeccCCccceeEEEEeCcH
Confidence 99999999875 588888664
No 153
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=3.1e-18 Score=155.20 Aligned_cols=202 Identities=15% Similarity=0.086 Sum_probs=138.0
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
..++|+.|+++ +++.+++++.+.+.... +|+. . ...+|+ +.++++++++++ +|++|+|++
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~--~Y~~------~-~~~~Lr----~~ia~~~~~~~~----~I~it~G~~~ 95 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAEIW--KYGD------P-ENHDLR----HALAAHHGVAPE----NIMVGEGIDG 95 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHHhh--cCCC------C-ccHHHH----HHHHHHhCCCHH----HEEEcCCHHH
Confidence 34699999884 68899999887653211 2322 1 134455 666667788774 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.++++|||.|++++|.|+.+ ...+...|.+++.+| .+ + ..+|++++++.+...++++|+++
T Consensus 96 ~l~~~~~~~~~~gd~vlv~~p~y~~~--------~~~~~~~g~~~~~vp--~~-~-~~~~~~~l~~~~~~~~~~~i~l~~ 163 (369)
T PRK08153 96 LLGLIVRLYVEPGDPVVTSLGAYPTF--------NYHVAGFGGRLVTVP--YR-D-DREDLDALLDAARRENAPLVYLAN 163 (369)
T ss_pred HHHHHHHHhcCCCCEEEECCCcchHH--------HHHHHHcCCeEEEee--CC-C-CCCCHHHHHHHhcccCCcEEEEeC
Confidence 77768888899999999999544443 333445666665555 33 2 35899999887754489999997
Q ss_pred CCC-CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCCCCCCC---cceEEEeCCCCCCC--CCCceEEEEecch
Q 023191 203 ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFE---YADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~---~~D~v~~s~~K~l~--gp~gG~l~~~~~~ 274 (286)
|+| +|...+.+++.++++.. +++||+|+++.. ....+.. ..+. ...+++.|++|.|+ |.+.|+++++.++
T Consensus 164 P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~-~~~~~~~-~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~ 241 (369)
T PRK08153 164 PDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCE-TAPAGAA-PPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGT 241 (369)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhh-hcCcccc-hhhhhcCCCEEEEecchHhccCcchheeeeecCHHH
Confidence 777 78888887777776543 899999999652 2211111 1111 12377999999885 5566999998877
Q ss_pred hhhhc
Q 023191 275 KEINK 279 (286)
Q Consensus 275 ~~~~~ 279 (286)
.+..+
T Consensus 242 ~~~l~ 246 (369)
T PRK08153 242 IKAFD 246 (369)
T ss_pred HHHHH
Confidence 66554
No 154
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.78 E-value=3e-18 Score=156.53 Aligned_cols=162 Identities=20% Similarity=0.205 Sum_probs=121.6
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+...+|| +.++++.|.+. .+++.+|+.++..++.+++++||+|++++..|++.+. .+...+...|..
T Consensus 70 p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~----~~~~~~~~~G~~ 136 (403)
T PRK07810 70 PTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFV----VCNEILPRWGVE 136 (403)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHH----HHHHHHHHcCcE
Confidence 3455566 77888888763 5888888888777888999999999998865544332 222223345654
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
++.+ +. .|++++++++++ +|++|+++ ++| +|...++++|.++|+++|+++++|++|+.+.....+ ..
T Consensus 137 v~~v--d~------~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~-~~- 205 (403)
T PRK07810 137 TVFV--DG------EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGL-PL- 205 (403)
T ss_pred EEEE--CC------CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hc-
Confidence 4444 22 389999999987 89999997 777 778889999999999999999999998876543221 11
Q ss_pred CCcceEEEeCCCCCCCCCC---ceEEEEecchh
Q 023191 246 FEYADVVTTTTHKSLRGPR---GAMIFFRKGVK 275 (286)
Q Consensus 246 ~~~~D~v~~s~~K~l~gp~---gG~l~~~~~~~ 275 (286)
++|++++|++|+++|+. ||+++++++..
T Consensus 206 --gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~ 236 (403)
T PRK07810 206 --GADVVVYSGTKHIDGQGRVLGGAILGDREYI 236 (403)
T ss_pred --CCcEEEccCCceecCCcCceeEEEEeChHHH
Confidence 59999999999998754 68888887643
No 155
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.78 E-value=4.5e-18 Score=152.30 Aligned_cols=204 Identities=18% Similarity=0.211 Sum_probs=150.6
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC-CCCCCcceeEEeCCChH
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g-~~~~~~~~~v~~~sG~~ 123 (286)
+.++|+.+||| +|+.+++++.+.+.... .||+. ...+ +++.+++++| .+.+ +|++++|++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~--rYPd~-------~~~~----l~~a~a~~~~~~~~~----~V~~gnGsd 85 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLN--RYPDP-------DYRE----LRAALAEYYGVVDPE----NVLVGNGSD 85 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhhc--cCCCC-------cHHH----HHHHHHHHhCCCCcc----eEEEcCChH
Confidence 46899999997 46888888877664211 23331 2233 4477888888 5654 599999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++..++++++.|||.|+++. |+|.+|...+...|.+++.++ .+ + +.+|++.+.+.+.+ ++++|++|
T Consensus 86 e~i~~l~~~~~~~gd~vl~~~--------Ptf~~Y~~~a~~~g~~~~~v~--~~-~-~~~d~~~~~~~~~~-~~~lv~i~ 152 (356)
T COG0079 86 ELIELLVRAFVEPGDTVLIPE--------PTFSMYEIAAQLAGAEVVKVP--LK-E-FRLDLDAILAAIRD-KTKLVFLC 152 (356)
T ss_pred HHHHHHHHHhhcCCCEEEEcC--------CChHHHHHHHHhcCCeEEEec--cc-c-cccCHHHHHHhhhc-CCCEEEEe
Confidence 88889999999999999999 788888878888998887776 44 4 89999999999998 99999998
Q ss_pred -CCC-CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCCCCCCCcce--EEEeCCCCCC--CCCCceEEEEecch
Q 023191 203 -ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYAD--VVTTTTHKSL--RGPRGAMIFFRKGV 274 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~~~D--~v~~s~~K~l--~gp~gG~l~~~~~~ 274 (286)
|+| +|...+.++|.++++.. +.+|++|+|+. ......... .+...+ +++-|++|.| .|-|-|+.+.+.++
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~-eF~~~~~~~-l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~ 230 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAYI-EFSPESSLE-LLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPEL 230 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hcCCchhhh-hccCCCCEEEEEecHHhhhcchhceeeccCCHHH
Confidence 555 77888888888777654 78999999943 222211100 001122 7788999965 45555999999998
Q ss_pred hhhhccCC
Q 023191 275 KEINKQGK 282 (286)
Q Consensus 275 ~~~~~~~~ 282 (286)
.+.+.+-+
T Consensus 231 i~~l~~vr 238 (356)
T COG0079 231 IAALNKVR 238 (356)
T ss_pred HHHHHHhc
Confidence 87776543
No 156
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.78 E-value=4.1e-18 Score=156.17 Aligned_cols=208 Identities=13% Similarity=0.084 Sum_probs=135.3
Q ss_pred HcCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCC--CCCCCcceeEE--e
Q 023191 46 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQ--S 118 (286)
Q Consensus 46 ~~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g--~~~~~~~~~v~--~ 118 (286)
.+.++|..|++ .++..+.+++.+++..... ......|+...+..++++++.+++.+..+ ++++ +|. .
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~----~v~~~~ 102 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAE--KNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEK----RIATVQ 102 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhcc--ccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccC----eEEEee
Confidence 46799988863 2344445555544321100 01113366778899999999998866544 3443 477 4
Q ss_pred CCChH-HHHHHH---HHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 023191 119 LSGSP-SNFQVY---TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (286)
Q Consensus 119 ~sG~~-a~~~~l---~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (286)
|.|++ +..+++ .++++|||+|++++ |+|+.|...+...|.+++.+++. +++++.+|++.+++.+...
T Consensus 103 t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~--------P~y~~~~~~~~~~G~~~~~v~l~-~~~~~~~d~~~l~~~~~~~ 173 (404)
T PTZ00376 103 ALSGTGALRLGFEFLKRFLPAGTTVYVSN--------PTWPNHVNIFKSAGLNVKEYRYY-DPKTKGLDFDGMLEDLRTA 173 (404)
T ss_pred ccCcchHHHHHHHHHHHhcCCCCEEEEcC--------CCchhHHHHHHHcCCceeecccc-CcccCCcCHHHHHHHHHhC
Confidence 78877 555444 47789999999999 66666665677888777666541 2245899999999988632
Q ss_pred --CCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCC---CC--CCCC--c-ceEEEeCCCCC
Q 023191 195 --RPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGV---IP--SPFE--Y-ADVVTTTTHKS 259 (286)
Q Consensus 195 --~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~---~~--~~~~--~-~D~v~~s~~K~ 259 (286)
++++++++ |+| +|... .+++|+++|++|++++|+|+++. .....+. .. ..+. . .-+++.|++|+
T Consensus 174 ~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~ 252 (404)
T PTZ00376 174 PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQ-GFASGDLDKDAYAIRLFAERGVEFLVAQSFSKN 252 (404)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhc-CccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCc
Confidence 45666667 777 77554 47788899999999999999953 2222110 00 0000 1 23779999998
Q ss_pred CC--CCCceEEE
Q 023191 260 LR--GPRGAMIF 269 (286)
Q Consensus 260 l~--gp~gG~l~ 269 (286)
|+ |.|-|+++
T Consensus 253 ~~~~GlRvG~~~ 264 (404)
T PTZ00376 253 MGLYGERIGALH 264 (404)
T ss_pred ccccccccceEE
Confidence 75 66779984
No 157
>PLN02483 serine palmitoyltransferase
Probab=99.78 E-value=4.5e-18 Score=159.00 Aligned_cols=171 Identities=22% Similarity=0.163 Sum_probs=121.8
Q ss_pred cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccc
Q 023191 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (286)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
|+......++| +.+++++|.+. .|++++|..++.+++.+++++||.|++.++.|.+... .+..
T Consensus 142 ~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~--------~~~~ 204 (489)
T PLN02483 142 GGTTKLHRELE----ELVARFVGKPA-----AIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN--------GARG 204 (489)
T ss_pred cCCcHHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH--------HHHH
Confidence 45455566666 77788888543 5999999887777889999999999999977777643 4456
Q ss_pred ceeeeEEEecccCCCCCCCCHHHHHHHhhh------cCC-----cEEEEc---CCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 164 VSIFFETMPYRLNESTGYIDYDQLEKSATL------FRP-----KLIVAG---ASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~------~~t-----k~v~i~---~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
.|.+++.++ .+ |++++++.+++ .++ +++++. .+..|...++++|+++|++|++++|+|
T Consensus 205 ~Ga~v~~~~--~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livD 276 (489)
T PLN02483 205 SGATIRVFQ--HN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLD 276 (489)
T ss_pred cCCeEEEEe--CC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEE
Confidence 776665554 22 45666655532 122 545553 233678899999999999999999999
Q ss_pred ccccccccccC------CCCCCCCcceEEEeCCCCCCCCCCceEEEEecchhhhhcc
Q 023191 230 MAHISGLVAAG------VIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 230 ~a~~~g~~~~~------~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~~ 280 (286)
++|+.|..... .......++|++++|++|+|+ +.||++++++++.+.+++
T Consensus 277 Ea~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g-~~GG~i~~~~~li~~l~~ 332 (489)
T PLN02483 277 EAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFG-SCGGYIAGSKELIQYLKR 332 (489)
T ss_pred CcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcc-cCceEEEcCHHHHHHHHH
Confidence 99987654211 011011247999999999885 468999999888877764
No 158
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.78 E-value=5.2e-18 Score=153.54 Aligned_cols=204 Identities=18% Similarity=0.119 Sum_probs=142.3
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..++++ +++.+++++.+.+.. + ..|+.. .+ .+++ +.+++++|++++ +|++|+|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~------~~-~~lr----~~ia~~~~~~~~----~i~~t~G~~ 94 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG------SG-FELK----AALAEKFGVDPE----RIILGNGSD 94 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------cH-HHHH----HHHHHHhCcCHH----HEEEcCCHH
Confidence 356889888774 678888988876643 1 123321 12 3444 667777888764 599999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++..++.+++++||+|+++++.|.. +...+...|.+++.++ . +++.+|++++++.+++ ++++|+++
T Consensus 95 ~~l~~~~~~l~~~gd~vl~~~p~y~~--------~~~~~~~~g~~~~~~~--~--~~~~~~~~~l~~~~~~-~~~~v~l~ 161 (367)
T PRK02731 95 EILELLARAYLGPGDEVIYSEHGFAV--------YPIAAQAVGAKPVEVP--A--KDYGHDLDAMLAAVTP-RTRLVFIA 161 (367)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCHHH--------HHHHHHHcCCeEEEec--c--cCCCCCHHHHHHHhCC-CCcEEEEe
Confidence 6666778889999999999955433 2223345666555554 3 3578999999999986 89999987
Q ss_pred -CCC-CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCCCCCC---C--cceEEEeCCCCCCC--CCCceEEEEe
Q 023191 203 -ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLR--GPRGAMIFFR 271 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~---~--~~D~v~~s~~K~l~--gp~gG~l~~~ 271 (286)
++| +|...+.++|.++++.+ ++++|+|+++...... +.....+ . ...+++.|++|.|+ |.+.|+++++
T Consensus 162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~ 240 (367)
T PRK02731 162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR-KDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP 240 (367)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC-cCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC
Confidence 777 78899999999998875 8999999996543321 1111111 1 13477889999864 4555999999
Q ss_pred cchhhhhcc
Q 023191 272 KGVKEINKQ 280 (286)
Q Consensus 272 ~~~~~~~~~ 280 (286)
+++.+..++
T Consensus 241 ~~~~~~l~~ 249 (367)
T PRK02731 241 PEIIDALNR 249 (367)
T ss_pred HHHHHHHHH
Confidence 887766553
No 159
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.78 E-value=5.8e-18 Score=156.46 Aligned_cols=204 Identities=11% Similarity=0.092 Sum_probs=140.1
Q ss_pred CceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
.++|..+.+. ++|.+.+++.+..... ..|+...+..+|++++.+++.+..+ .+ .+|++|+|++ +
T Consensus 87 ~i~L~~g~p~~~~~p~~~~~~~~~~~~~--------~~Y~~~~g~~~lr~~ia~~~~~~~~--~~---~~Iiit~G~~~a 153 (431)
T PRK15481 87 LHDLAGGNPDPQRLPDLSRYFARLSRTP--------RLYGDAPVSPELHAWAARWLRDDCP--VA---FEIDLTSGAIDA 153 (431)
T ss_pred hhhhhcCCCChhHhHHHHHHHHHhhhhh--------hhcCCcCCCHHHHHHHHHHHhhccC--Cc---CeEEEecCcHHH
Confidence 4677766553 3455666666543321 1245556667788777777665433 22 2599999999 8
Q ss_pred HHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc--
Q 023191 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-- 202 (286)
Q Consensus 125 ~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-- 202 (286)
+..++.++++|||.|++++ |+|..+...+...|.+++.++ ++ ++ .+|++++++++++ ++|+++++
T Consensus 154 l~~~~~~l~~pgd~Vlv~~--------P~y~~~~~~~~~~g~~~~~v~--~~-~~-g~~~~~l~~~~~~-~~k~i~~~p~ 220 (431)
T PRK15481 154 IERLLCAHLLPGDSVAVED--------PCFLSSINMLRYAGFSASPVS--VD-AE-GMQPEKLERALAQ-GARAVILTPR 220 (431)
T ss_pred HHHHHHHhCCCCCEEEEeC--------CCcHHHHHHHHHcCCeEEeec--cC-CC-CCCHHHHHHHHhc-CCCEEEECCC
Confidence 8879999999999999999 666655556677787666565 44 22 4899999999977 89998885
Q ss_pred CCC-CCCccCHH---HHHHHHHhc-CCEEEEeccccccccccCCCCCCCC---cceEEEeCCCCCCC-CCCceEEEEecc
Q 023191 203 ASA-YARLYDYE---RIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFE---YADVVTTTTHKSLR-GPRGAMIFFRKG 273 (286)
Q Consensus 203 ~~n-~g~~~~l~---~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~~~---~~D~v~~s~~K~l~-gp~gG~l~~~~~ 273 (286)
|+| +|...+.+ +|.++|++| +++||+|+++.. ....+. ...+. ..-+++.|++|.|+ |.+-|+++.+++
T Consensus 221 p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~-~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~~ 298 (431)
T PRK15481 221 AHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFAL-LSSSPY-HSVIPQTTQRWALIRSVSKALGPDLRLAFVASDSA 298 (431)
T ss_pred CCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhh-hccCCC-CCCCcCCCCCEEEEeeeccccCCCceeEEEeCCHH
Confidence 455 66777654 999999999 999999999642 221111 11111 13478999999885 223399999887
Q ss_pred hhhhhc
Q 023191 274 VKEINK 279 (286)
Q Consensus 274 ~~~~~~ 279 (286)
+.+..+
T Consensus 299 ~~~~~~ 304 (431)
T PRK15481 299 TSARLR 304 (431)
T ss_pred HHHHHH
Confidence 765554
No 160
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=4.3e-18 Score=154.71 Aligned_cols=162 Identities=17% Similarity=0.132 Sum_probs=117.5
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+...++| +.+++++|.+. .+++++|+.++..++.++++|||+|+++.+.|.++...... +...|.+
T Consensus 53 p~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~-----~~~~g~~ 118 (385)
T PRK08574 53 PTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKS-----LEKFGVK 118 (385)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH-----hhccCcE
Confidence 4456666 77888888753 36677776688878889999999999999887776432210 1123432
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
+..+ .+|++++++++++++||+|+++ ++| +|...|+++|+++|+++|+++++|++|+.|.....+ .
T Consensus 119 v~~~---------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~-- 186 (385)
T PRK08574 119 VVLA---------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL-R-- 186 (385)
T ss_pred EEEE---------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh-h--
Confidence 2211 2468999999876579999997 666 678889999999999999999999999877543222 1
Q ss_pred CCcceEEEeCCCCCCCCCC---ceEEEEe-cchhh
Q 023191 246 FEYADVVTTTTHKSLRGPR---GAMIFFR-KGVKE 276 (286)
Q Consensus 246 ~~~~D~v~~s~~K~l~gp~---gG~l~~~-~~~~~ 276 (286)
.++|++++|++|+++||. ||+++++ +++.+
T Consensus 187 -~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~ 220 (385)
T PRK08574 187 -HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLE 220 (385)
T ss_pred -hCCcEEEeeCceeecCCCCceeEEEEECcHHHHH
Confidence 259999999999999874 5756664 44443
No 161
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.78 E-value=2.8e-18 Score=154.87 Aligned_cols=202 Identities=15% Similarity=0.094 Sum_probs=141.7
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChH
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~ 123 (286)
+.++|..++++ +++.+++++.+.+.... +|+. ..+ .+++ +.+++++|++++ +|++ ++|++
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~------~~~-~~lr----~~ia~~~~~~~~----~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKIH--RYPE------PDA-PELR----EALSKYTGVPVE----NIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhhc--CCCC------CCH-HHHH----HHHHHHhCCCHH----HEEEeCCCHH
Confidence 56899888774 57888888877654311 2332 122 3444 667777888775 4888 78988
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++..+++++++|||+|++++| .|..+...+...|.+++.++ .+ +++.+|++++++.+.+ ++++++++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p--------~y~~~~~~~~~~g~~~~~~~--~~-~~~~~~~~~l~~~~~~-~~~~v~~~ 165 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTP--------TFSYYEISAKAHGAKPVYAK--RE-EDFSLDVDSVLNAITE-KTKVIFLC 165 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCC--------ChHHHHHHHHHcCCEEEEee--cC-CCCCcCHHHHHHHhcc-CCCEEEEe
Confidence 666678888999999999994 44433334455676665554 33 5678999999999876 89999886
Q ss_pred -CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCc--ceEEEeCCCCCCCCC--CceEEEEecchhh
Q 023191 203 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEY--ADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~--~D~v~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (286)
++| +|...+.+++.++|+++++++|+|++|.. ........ .... .-+++.|++|.|+.| +.|++++++++.+
T Consensus 166 ~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~-~~~~~~~~-~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~ 243 (361)
T PRK00950 166 TPNNPTGNLIPEEDIRKILESTDALVFVDEAYVE-FAEYDYTP-LALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID 243 (361)
T ss_pred CCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhh-hCccchHH-HHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHH
Confidence 766 78899999999999999999999999752 22111100 0011 236788999988534 4599999888775
Q ss_pred hhc
Q 023191 277 INK 279 (286)
Q Consensus 277 ~~~ 279 (286)
..+
T Consensus 244 ~~~ 246 (361)
T PRK00950 244 YYM 246 (361)
T ss_pred HHH
Confidence 554
No 162
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.78 E-value=3.2e-18 Score=156.22 Aligned_cols=160 Identities=19% Similarity=0.210 Sum_probs=118.6
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeee
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (286)
...+|| +.+++++|.+. .+++.+|++++..++.++++|||+|+++++.|+++..... ......|.++
T Consensus 66 ~~~~Le----~~lA~l~G~~~-----~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G~~v 132 (398)
T PRK07504 66 TVDMFE----KRMCALEGAED-----ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVE----TLLPRYGIES 132 (398)
T ss_pred hHHHHH----HHHHHHhCCCe-----eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHH----HHHhhcCeEE
Confidence 345555 78888899876 2567788777776788889999999999977766532211 0112234433
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC
Q 023191 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 246 (286)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~ 246 (286)
+.+ + .+|++++++++++ +||+|+++ |+| +|...|+++|.++|+++|+++|+|++|+.+... .++
T Consensus 133 ~~v----d----~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~-----~~~ 198 (398)
T PRK07504 133 TLV----D----GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ-----KPL 198 (398)
T ss_pred EEE----C----CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC-----Cch
Confidence 333 2 3689999999987 99999997 666 678899999999999999999999998766542 222
Q ss_pred C-cceEEEeCCCCCCCCCC---ceEEEEecchh
Q 023191 247 E-YADVVTTTTHKSLRGPR---GAMIFFRKGVK 275 (286)
Q Consensus 247 ~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~ 275 (286)
. ++|++++|+||+|+|+. ||++++++++.
T Consensus 199 ~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i 231 (398)
T PRK07504 199 ELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWI 231 (398)
T ss_pred hhCCCEEEeeccccccCCccceEEEEEeCcHHH
Confidence 2 59999999999998753 47888877644
No 163
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.78 E-value=3.8e-18 Score=155.40 Aligned_cols=165 Identities=15% Similarity=0.169 Sum_probs=122.9
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+...+|| +.+++++|.+. .+++++|+.++.+++.+++++||+|+++++.|++.+... ...+...|..
T Consensus 59 p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~----~~~~~~~G~~ 125 (391)
T TIGR01328 59 PTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALL----EHALTKFGIQ 125 (391)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHH----HHHHhcCCeE
Confidence 3455566 78888889865 478888877887788899999999999997766543221 1122334544
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
++.+ +.+ |++++++++++ +|++|+++ ++| +|.+.|+++|.++|+++|+++|+|++++.+.... +
T Consensus 126 ~~~v--d~~------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-----~ 191 (391)
T TIGR01328 126 VDFI--NMA------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN-----P 191 (391)
T ss_pred EEEE--CCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC-----c
Confidence 4333 222 79999999987 89999997 766 6788899999999999999999999987664421 2
Q ss_pred CC-cceEEEeCCCCCCCCCC---ceEEEEecchhhhhc
Q 023191 246 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINK 279 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~~~~ 279 (286)
+. ++|+++.|++|+++|+. ||+++.++++.+..+
T Consensus 192 ~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~ 229 (391)
T TIGR01328 192 VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIR 229 (391)
T ss_pred hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHH
Confidence 22 59999999999998765 588888877654433
No 164
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.77 E-value=7.1e-18 Score=153.79 Aligned_cols=198 Identities=16% Similarity=0.178 Sum_probs=137.2
Q ss_pred CCHHHHHHhccccccCCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPH 136 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~G 136 (286)
..|++++++.+++.. |..++.+.+ +|+......+|| +.+++++|.+. .+++++|.+++..++.+++++|
T Consensus 13 ~~~~~~~~~~~a~~~-~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~~i~~l~~~G 82 (392)
T PLN03227 13 SSPTLRQTALESLSH-YGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSSTVAAFAKRG 82 (392)
T ss_pred CCHHHHHHHHHHHHH-hCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHHHHhCCCC
Confidence 478899999888865 544544433 455555566666 77888888864 5999999997777999999999
Q ss_pred CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh----------cCCcEEEEc-CCC
Q 023191 137 DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----------FRPKLIVAG-ASA 205 (286)
Q Consensus 137 d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~----------~~tk~v~i~-~~n 205 (286)
|+|++.+..|++... ++.+.+..++.+ +.+ ..-|++.+.+.+.+ .++++|++. +.|
T Consensus 83 D~Vl~~~~~h~s~~~--------~~~l~~~~~~~~--~~~---d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~ 149 (392)
T PLN03227 83 DLLVVDRGVNEALLV--------GVSLSRANVRWF--RHN---DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYK 149 (392)
T ss_pred CEEEEeccccHHHHH--------HHHHcCCeEEEe--CCC---CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcC
Confidence 999999987776643 223334333222 222 11133444334431 157888887 444
Q ss_pred -CCCccCHHHHHHHHHhcCCEEEEecccccccccc---CCC----CCCCCcceEEEeCCCCCCCCCCceEEEEecchhhh
Q 023191 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GVI----PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 206 -~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~----~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (286)
.|.+.|+++|.++|++||+++|+|++|+.|.... +.. ..+..++|++++|++|.+ ||.||++++++++.+.
T Consensus 150 ~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~gg~v~~~~~~~~~ 228 (392)
T PLN03227 150 NTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVGGMTVGSEEVVDH 228 (392)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccCcEEecCHHHHHH
Confidence 6688999999999999999999999998665421 100 012235899999999976 6889999998887765
Q ss_pred hc
Q 023191 278 NK 279 (286)
Q Consensus 278 ~~ 279 (286)
.+
T Consensus 229 ~~ 230 (392)
T PLN03227 229 QR 230 (392)
T ss_pred HH
Confidence 54
No 165
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.77 E-value=1.2e-17 Score=138.77 Aligned_cols=208 Identities=17% Similarity=0.210 Sum_probs=157.8
Q ss_pred HcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccC-Ccc-h--HHHHHHHHHHHHHHHCCCCCCCcceeEEeC
Q 023191 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYG-GNE-Y--IDMAESLCQKRALEAFRLDPEKWGVNVQSL 119 (286)
Q Consensus 46 ~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~-~~~-~--~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~ 119 (286)
++.||+++-+. .+++++++|+.+ |.|||+-..+.. +.- . .+.+.+ ..+.+++++|+|. +.+|
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E-----~gDGYSvCD~C~~Grldei~kPpI~~-F~~dlaeFlg~D~------~R~t 82 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLE-----WGDGYSVCDFCLEGRLDEITKPPIKD-FLEDLAEFLGMDE------VRVT 82 (382)
T ss_pred cCccccChhhccCcCCHHHHHHHHH-----hcCCcchhhhhccCccccccCCcHHH-HHHHHHHHhCCce------eeec
Confidence 36788865444 579999999976 666777766663 110 0 111221 2355899999986 9999
Q ss_pred CChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh-----
Q 023191 120 SGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----- 193 (286)
Q Consensus 120 sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~----- 193 (286)
.|+- +-++++.+++++||-|++....|.+.+- .++.+|..+..+| ....+.+.+++|...+.|.+
T Consensus 83 ~GARe~KfavMhal~~~gd~vV~D~~aHYttyv--------AAEragl~v~eVp-~tg~Pey~i~~e~y~~viee~~~~~ 153 (382)
T COG1103 83 AGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV--------AAERAGLNVAEVP-NTGYPEYKITPEGYAEVIEEVKDEG 153 (382)
T ss_pred ccchhhHHHHHHHhccCCCEEEEcCcchHHHHH--------HHHhcCCeEEecC-CCCCCceEecHHHHHHHHHHHHhcc
Confidence 9999 9999999999999999998876654432 4557787787787 33446788999888777643
Q ss_pred -cCCcEEEEc--CCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEE
Q 023191 194 -FRPKLIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIF 269 (286)
Q Consensus 194 -~~tk~v~i~--~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~ 269 (286)
..+.+.+++ -.++|...+.++++++|++++++++..+|+..|-.+....... +|++++|+||++.+... |++.
T Consensus 154 g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g---~DFiVgSGHKsmAAs~PiGvl~ 230 (382)
T COG1103 154 GDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIG---ADFIVGSGHKSMAASAPIGVLA 230 (382)
T ss_pred CCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccC---CCEEEecCccchhccCCeeEEe
Confidence 136677776 4558999999999999999999999999999998876655555 99999999999977655 9999
Q ss_pred Eecchhhh
Q 023191 270 FRKGVKEI 277 (286)
Q Consensus 270 ~~~~~~~~ 277 (286)
.+.++.+.
T Consensus 231 ~~eE~ae~ 238 (382)
T COG1103 231 MSEEWAEI 238 (382)
T ss_pred ehhHHHHH
Confidence 99988754
No 166
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.77 E-value=4.8e-18 Score=155.32 Aligned_cols=163 Identities=17% Similarity=0.204 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeee
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (286)
...++| +.+++++|.+. .|++++|+.++.+++.++++|||+|+++.+.|+..+.. +...+...|.++
T Consensus 66 ~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~----~~~~~~~~G~~v 132 (403)
T PRK07503 66 TLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAF----LHHGLGEFGVTV 132 (403)
T ss_pred hHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHH----HHHHHhhCCEEE
Confidence 345555 78888889864 48888888877778888999999999998766543221 111223345444
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC
Q 023191 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 246 (286)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~ 246 (286)
+.+ +. .|++++++++++ +||+|+++ ++| +|...|+++|.++|+++|+++|+|++|+.+... .++
T Consensus 133 ~~v--d~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~-----~~l 198 (403)
T PRK07503 133 RHV--DL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ-----RPL 198 (403)
T ss_pred EEe--CC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-----Cch
Confidence 333 22 278999999987 89999997 777 778889999999999999999999998765432 122
Q ss_pred C-cceEEEeCCCCCCCCCC---ceEEEEecchhhhh
Q 023191 247 E-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEIN 278 (286)
Q Consensus 247 ~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~~~ 278 (286)
. ++|++++|++|+++|+. ||+++.++++.+..
T Consensus 199 ~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l 234 (403)
T PRK07503 199 ELGADLVVHSATKYLGGHGDITAGLVVGGKALADRI 234 (403)
T ss_pred hhCCCEEEccccccccCCCceeEEEEEcCHHHHHHH
Confidence 2 58999999999998864 68888766655444
No 167
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.77 E-value=1.2e-17 Score=151.82 Aligned_cols=208 Identities=19% Similarity=0.196 Sum_probs=138.7
Q ss_pred HcCceecCCCC--C-CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 46 WKGLELIPSEN--F-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 46 ~~~i~L~~~e~--~-~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
++.|+|..+++ + +++.+++++.+.+.. |..+++.. ....+...+.+.+++.++++++.+ . .+++++|+
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~---~~~~g~~~~~~~l~~~la~~~~~~--~---~i~~~~g~ 109 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARR-YGAGSGGS---RLVTGNSPAHEALEEELAEWFGAE--R---ALLFSSGY 109 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHh-cCCCCCCc---CcccCCcHHHHHHHHHHHHHhCCC--c---EEEECcHH
Confidence 35688887764 3 578999999988864 32222211 111122345556778888888842 2 47777777
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEE
Q 023191 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIV 200 (286)
Q Consensus 123 ~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~ 200 (286)
.++..++.+++++||+|++.++.|+++.. .+...|..++.++ ..|++++++.+++. ++++++
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~--------~~~~~g~~~~~~~--------~~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLID--------GARLSRARVRRYP--------HNDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHH--------HHHhcCCceEEeC--------CCCHHHHHHHHHhccCCCeEEE
Confidence 76666778889999999999977766543 2334554444333 13889999988763 244555
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEecccccccccc-CC--CC-CCCC--cceEEEeCCCCCCCCCCceEEEEec
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GV--IP-SPFE--YADVVTTTTHKSLRGPRGAMIFFRK 272 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~--~~-~~~~--~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (286)
++ +.| +|...++++|.++|++||+++|+|++|+.|.... +. .. ..+. ..++++.|+||+|+ +.||+++.++
T Consensus 174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~~Gg~~~~~~ 252 (385)
T PRK05958 174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-SSGAAVLGSE 252 (385)
T ss_pred EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-cCCcEEEcCH
Confidence 54 333 6678899999999999999999999997765431 11 00 0111 24477999999994 5678888887
Q ss_pred chhhhhc
Q 023191 273 GVKEINK 279 (286)
Q Consensus 273 ~~~~~~~ 279 (286)
++.+..+
T Consensus 253 ~~~~~~~ 259 (385)
T PRK05958 253 TLIDYLI 259 (385)
T ss_pred HHHHHHH
Confidence 7765543
No 168
>PLN02822 serine palmitoyltransferase
Probab=99.77 E-value=3.1e-18 Score=159.75 Aligned_cols=206 Identities=17% Similarity=0.182 Sum_probs=142.4
Q ss_pred cCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
+.++|..+.. ..++++++++.+.+.+ |..++.+.+ +|+..+...++| +.++++++.+. .|++++|.
T Consensus 110 ~~id~~s~~~lgl~~~~~i~ea~~~al~~-~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G~ 179 (481)
T PLN02822 110 DVVNFASANYLGLIGNEKIKESCTSALEK-YGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYGL 179 (481)
T ss_pred eEEEeECCCcCCCCCCHHHHHHHHHHHHH-hCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCHH
Confidence 4578876543 3589999999998876 433555433 355555555666 77778888642 59999998
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh---h-----c
Q 023191 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT---L-----F 194 (286)
Q Consensus 123 ~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~---~-----~ 194 (286)
+++..++.+++++||.|++....|.+... ++.+.+..++.++ .+ |.++++..+. . .
T Consensus 180 ~a~~sai~a~~~~gd~Ii~d~~~H~s~~~--------~~~ls~~~~~~~~--~n------d~~~l~~~l~~~~~~~~~~~ 243 (481)
T PLN02822 180 STIFSVIPAFCKKGDIIVADEGVHWGIQN--------GLYLSRSTIVYFK--HN------DMESLRNTLEKLTAENKRKK 243 (481)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCccHHHHH--------HHHHcCCeEEEEC--CC------CHHHHHHHHHHHhhhhcccC
Confidence 87777999999999999987765544422 3445555444443 33 3344443332 1 1
Q ss_pred CC-cEEEEc--CCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccC---C-CCCCC--CcceEEEeCCCCCCCCCCc
Q 023191 195 RP-KLIVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---V-IPSPF--EYADVVTTTTHKSLRGPRG 265 (286)
Q Consensus 195 ~t-k~v~i~--~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~-~~~~~--~~~D~v~~s~~K~l~gp~g 265 (286)
++ ++|+++ .+|+|.+.|+++|.++|++||+++|+|++|+.|.+... . ....+ ...|++++|++|.|+ ..|
T Consensus 244 ~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg-~~G 322 (481)
T PLN02822 244 KLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA-TEG 322 (481)
T ss_pred CCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-hCC
Confidence 35 577775 45588999999999999999999999999997765421 0 11111 247999999999985 567
Q ss_pred eEEEEecchhhhhc
Q 023191 266 AMIFFRKGVKEINK 279 (286)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (286)
|+++++.++.+..+
T Consensus 323 G~i~g~~~ii~~~~ 336 (481)
T PLN02822 323 GFCTGSARVVDHQR 336 (481)
T ss_pred eEEEcCHHHHHHHH
Confidence 99999988877665
No 169
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=5.1e-18 Score=154.58 Aligned_cols=158 Identities=15% Similarity=0.161 Sum_probs=118.2
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+++.+++++|.+. .+++++|+.++.+++. ++++||+|+++++.|++.+..+. ..+...|.+++.++ .
T Consensus 59 le~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~----~~~~~~G~~v~~v~--~- 125 (390)
T PRK08064 59 LEDIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT----EVLSRFGIEHTFVD--M- 125 (390)
T ss_pred HHHHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH----HHHHHcCCEEEEEC--C-
Confidence 4488888899864 4889999887665665 78999999999988876543221 11223465555443 2
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEe
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~ 254 (286)
.|++++++.+++ +||+|+++ |+| +|...|+++|.++|+++|+++++|++++.+...... .. ++|+++.
T Consensus 126 -----~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~-~~---g~Divv~ 195 (390)
T PRK08064 126 -----TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL-DL---GADVVLH 195 (390)
T ss_pred -----CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch-hh---CCcEEEe
Confidence 278999999987 89999998 777 778899999999999999999999997765432111 11 5999999
Q ss_pred CCCCCCCCCCc---eEEEEec-chhhh
Q 023191 255 TTHKSLRGPRG---AMIFFRK-GVKEI 277 (286)
Q Consensus 255 s~~K~l~gp~g---G~l~~~~-~~~~~ 277 (286)
|+||+++|+.+ |++++++ ++.+.
T Consensus 196 S~tK~~~G~~~~laG~~v~~~~~~~~~ 222 (390)
T PRK08064 196 SATKFLAGHSDVLAGLAVVKDEELAQK 222 (390)
T ss_pred ecceeccCCccceeEEEEeCCHHHHHH
Confidence 99999998864 8888875 44443
No 170
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.77 E-value=5.4e-18 Score=152.89 Aligned_cols=202 Identities=15% Similarity=0.150 Sum_probs=134.0
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|+.++++ +|+.+++++.+.+.. . ..|+. .+..+++ +.++++++++++ +|++|+|++
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~-------~~~~~lr----~~ia~~~~~~~~----~i~it~Ga~~ 83 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPD-------VEYRHLH----QALARHHQVPAS----WILAGNGETE 83 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcC-------ccHHHHH----HHHHHHhCcChh----hEEECCCHHH
Confidence 46899999885 688999998876543 1 12322 1234444 666777788875 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.++ .+|+ +++++ |.|..+...+...|.+++.++++.+ +++.+| +++++.+.+ ++|+|+++
T Consensus 84 ~l~~~~~~l-~~g~-viv~~--------P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~-~~~~~~~~~-~~k~v~l~~ 150 (356)
T PRK08056 84 SIFAVVSGL-KPRR-AMIVT--------PGFAEYRRALQQVGCEIRRYSLREA-DGWQLT-DAILEALTP-DLDCLFLCT 150 (356)
T ss_pred HHHHHHHHh-CCCC-EEEeC--------CCcHHHHHHHHHcCCeEEEEecccc-cCCCcc-HHHHHhccC-CCCEEEEeC
Confidence 776677765 7786 66667 5555555455677777766664321 346677 455566665 89999997
Q ss_pred CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCC-CCCCCC--cceEEEeCCCCCCCCC--CceEEEEec-
Q 023191 203 ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPFE--YADVVTTTTHKSLRGP--RGAMIFFRK- 272 (286)
Q Consensus 203 ~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~~--~~D~v~~s~~K~l~gp--~gG~l~~~~- 272 (286)
|+| +|...+ +++|+++|+++++++|+|+++. .....+. ....+. ...+++.|++|+|+.| +-|++++.+
T Consensus 151 p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~ 229 (356)
T PRK08056 151 PNNPTGLLPERQLLQAIAERCKSLNIALILDEAFI-DFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD 229 (356)
T ss_pred CcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchh-ccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCH
Confidence 777 777666 7889999999999999999953 2221110 000111 2568899999988533 449999853
Q ss_pred chhhhhc
Q 023191 273 GVKEINK 279 (286)
Q Consensus 273 ~~~~~~~ 279 (286)
++.+..+
T Consensus 230 ~~~~~l~ 236 (356)
T PRK08056 230 AAVARMR 236 (356)
T ss_pred HHHHHHH
Confidence 4544443
No 171
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.77 E-value=9.4e-18 Score=151.37 Aligned_cols=200 Identities=14% Similarity=0.037 Sum_probs=133.6
Q ss_pred HcCceecCCCC--CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC-CCCcceeEEeCCCh
Q 023191 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGS 122 (286)
Q Consensus 46 ~~~i~L~~~e~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~v~~~sG~ 122 (286)
...++|..+++ ++++.+++++.+.... .. |+...+..++++++++++.+.+|.+ .+. .+|++|+|+
T Consensus 21 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~------Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~--~~I~it~G~ 89 (357)
T TIGR03539 21 DGIVDLSVGTPVDPVPPLIRAALAAAADA---PG------YPQTWGTPELREAIVDWLERRRGVPGLDP--TAVLPVIGT 89 (357)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhh---CC------CCcccCCHHHHHHHHHHHHHhcCCCCCCc--CeEEEccCh
Confidence 35688988765 4577888888765422 12 3444667899999999998887754 332 369999999
Q ss_pred H-HHHHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 123 P-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 123 ~-a~~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
+ ++..++..+ +++||.|++++|.|++ +...+...|.++ +++ + |++.++ +.++++|+
T Consensus 90 ~~~i~~~~~~l~~~~gd~Vl~~~p~y~~--------~~~~~~~~g~~~--~~v--~------~~~~l~----~~~~~~v~ 147 (357)
T TIGR03539 90 KELVAWLPTLLGLGPGDTVVIPELAYPT--------YEVGALLAGATP--VAA--D------DPTELD----PVGPDLIW 147 (357)
T ss_pred HHHHHHHHHHHcCCCCCEEEECCCCcHH--------HHHHHHhcCCEE--ecc--C------ChhhcC----ccCccEEE
Confidence 9 776677777 7999999999955543 333445566544 332 1 233322 23789999
Q ss_pred Ec-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--------cceEEEeCCCCCC--CCCCc
Q 023191 201 AG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--------YADVVTTTTHKSL--RGPRG 265 (286)
Q Consensus 201 i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--------~~D~v~~s~~K~l--~gp~g 265 (286)
++ ++| +|...+ +++|.++|++||+++|+|+++.. ....+.....+. ...+++.|++|.| .|.+.
T Consensus 148 ~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~ 226 (357)
T TIGR03539 148 LNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLE-LGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRA 226 (357)
T ss_pred EeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhh-hccCCCCccceecccCCCccccEEEEeccccccCCCceeE
Confidence 97 777 776554 66789999999999999999742 221111111110 1237799999985 66677
Q ss_pred eEEEEecchhhhhc
Q 023191 266 AMIFFRKGVKEINK 279 (286)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (286)
|++++++++.+..+
T Consensus 227 G~~i~~~~~~~~~~ 240 (357)
T TIGR03539 227 GFVAGDPALVAELL 240 (357)
T ss_pred EEEecCHHHHHHHH
Confidence 99998877665443
No 172
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.77 E-value=5.4e-18 Score=154.33 Aligned_cols=162 Identities=15% Similarity=0.134 Sum_probs=119.4
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+...+|| +.+++++|.+. .+++.+|+.++.+++.++++|||+|+++++.|++.+.... ......|..
T Consensus 61 pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~----~~~~~~gi~ 127 (386)
T PRK06767 61 PTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLE----VLEEKFMIT 127 (386)
T ss_pred cchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHH----HHHhhcCeE
Confidence 3455666 78888888753 5888889887777888999999999999977765543211 011112322
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
+..+ ...|++++++++++ +||+|+++ ++| +|...|+++|.++|+++|+++++|++++.+.... +
T Consensus 128 ~~~~--------~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~-----p 193 (386)
T PRK06767 128 HSFC--------DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQR-----P 193 (386)
T ss_pred EEEe--------CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCC-----c
Confidence 2111 12488999999987 89999997 666 6788999999999999999999999987554332 2
Q ss_pred CC-cceEEEeCCCCCCCCCC---ceEEEEecchhh
Q 023191 246 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKE 276 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~ 276 (286)
+. ++|+++.|++|+++|+. ||++++++++.+
T Consensus 194 l~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~ 228 (386)
T PRK06767 194 LELGCDAVVHSATKYIGGHGDVVAGVTICKTRALA 228 (386)
T ss_pred hhcCCcEEEecCcceecCCCCceeEEEEeChHHHH
Confidence 22 58999999999998875 699999887543
No 173
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=8.5e-18 Score=152.49 Aligned_cols=159 Identities=11% Similarity=0.061 Sum_probs=111.7
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
+....|| +.++++.+... +++++|++ |+.+++.++++|||+|+++++.|++...... ......|.
T Consensus 61 pt~~~Le----~~iA~le~~~~------~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~----~~l~~~Gi 126 (394)
T PRK09028 61 PTHFAFQ----AAIVELEGGAG------TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCD----KILKGFGI 126 (394)
T ss_pred chHHHHH----HHHHHHhCCCc------EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHH----Hhhhhcce
Confidence 3445566 66666666542 45555555 8877889999999999999977755432110 01122343
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
++..+ +. -|.+.+++++++ +||+|+++ ++| ++...++++|+++||++|+++++|++|+.+.. ..
T Consensus 127 ~v~~v--~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-----~~ 192 (394)
T PRK09028 127 ETTYY--DP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-----SR 192 (394)
T ss_pred EEEEE--CC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 33322 21 156789998887 89999998 777 66889999999999999999999999887642 22
Q ss_pred CCC-cceEEEeCCCCCCCCCCc---eEEEEecch
Q 023191 245 PFE-YADVVTTTTHKSLRGPRG---AMIFFRKGV 274 (286)
Q Consensus 245 ~~~-~~D~v~~s~~K~l~gp~g---G~l~~~~~~ 274 (286)
+++ |+|+++.|+|||++|+.. |+++.++++
T Consensus 193 Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~ 226 (394)
T PRK09028 193 PFEMGVDISIQAATKYIVGHSDVMLGTATANEKH 226 (394)
T ss_pred ccccCceEEEEeCCeEecCCCCEEEEEEECCHHH
Confidence 334 599999999999999853 666555544
No 174
>PRK10534 L-threonine aldolase; Provisional
Probab=99.77 E-value=4.8e-18 Score=151.75 Aligned_cols=206 Identities=14% Similarity=0.184 Sum_probs=132.0
Q ss_pred ceecCCCCC-CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHH
Q 023191 49 LELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQ 127 (286)
Q Consensus 49 i~L~~~e~~-~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~ 127 (286)
|+|..++++ ++|.+++++.+..... ..|++.....+|+ +.+++++|++. .+++++|+.++.+
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~--------~~Y~~~~~~~~L~----~~la~~~g~~~-----~~v~~~g~~a~~~ 64 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGD--------DVYGDDPTVNALQ----DYAAELSGKEA-----ALFLPTGTQANLV 64 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCC--------cccCCCHHHHHHH----HHHHHHhCCCe-----EEEeCchHHHHHH
Confidence 567777775 6889999987654331 1133334555666 66777889876 2555555557766
Q ss_pred HHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc
Q 023191 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG 202 (286)
Q Consensus 128 ~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~ 202 (286)
.+.+++.+||+|+++.+.|...+.. .++...+ ..+.++++.+ +++.+|+++|++++++. ++++|+++
T Consensus 65 ~l~~~~~~gd~vi~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~ 136 (333)
T PRK10534 65 ALLSHCERGEEYIVGQAAHNYLYEA------GGAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred HHHHhcCCCCeeEEechhhhhHhcC------CchHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence 7778899999999887544321110 0122222 1233444445 56899999999998652 58899998
Q ss_pred CCCCCCccCHH---HHHHHHHhcCCEEEEecccccccccc-CCCCCCC-CcceEEEeCCCCCCCCCCceEEEEecchhhh
Q 023191 203 ASAYARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAA-GVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 203 ~~n~g~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (286)
.+|+|...+.+ +|.++|++|+++|++|+|+..+.... +.....+ .+.|.++.|++|.++.+.||++++++++.+.
T Consensus 137 np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~ 216 (333)
T PRK10534 137 NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKR 216 (333)
T ss_pred cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCHHHHHH
Confidence 55568766655 55678899999999999976432211 1111001 1256666689998887766778888877655
Q ss_pred hc
Q 023191 278 NK 279 (286)
Q Consensus 278 ~~ 279 (286)
.+
T Consensus 217 ~~ 218 (333)
T PRK10534 217 AR 218 (333)
T ss_pred HH
Confidence 54
No 175
>PRK05939 hypothetical protein; Provisional
Probab=99.77 E-value=7.1e-18 Score=153.71 Aligned_cols=157 Identities=13% Similarity=0.141 Sum_probs=118.5
Q ss_pred CcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccce
Q 023191 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (286)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (286)
+++....|| +.++++.|.+. .+.+++|+.++.+++.++++|||+|+++++.|+++..... .+...|
T Consensus 45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~-----~l~~~G 110 (397)
T PRK05939 45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFG-----TLRGLG 110 (397)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHH-----HHHhcC
Confidence 345566666 77778888765 5899999888887889999999999999987776643221 122345
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC
Q 023191 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (286)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~ 243 (286)
.+++.++ . .|++++++++++ +||+|+++ ++| +|.+.|+++|+++|+++|+++++|++|+.+... +
T Consensus 111 ~~v~~v~--~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-~--- 177 (397)
T PRK05939 111 VEVTMVD--A------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLF-R--- 177 (397)
T ss_pred CEEEEEC--C------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccccc-C---
Confidence 5444443 2 389999999987 99999997 777 778899999999999999999999998766431 1
Q ss_pred CCCC-cceEEEeCCCCCCCCCCc--eEEEE
Q 023191 244 SPFE-YADVVTTTTHKSLRGPRG--AMIFF 270 (286)
Q Consensus 244 ~~~~-~~D~v~~s~~K~l~gp~g--G~l~~ 270 (286)
+.. ++|+++.|+||+++|+.. |.+++
T Consensus 178 -~~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 178 -PKDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred -ccccCCEEEEecCeecccCCCCeEEEEEe
Confidence 222 599999999999988644 44444
No 176
>PLN02672 methionine S-methyltransferase
Probab=99.77 E-value=1.3e-17 Score=164.86 Aligned_cols=213 Identities=10% Similarity=0.034 Sum_probs=148.8
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.|+|..++++ +|+.+++++.+.+.. .+ + ..+..++++++++++++.+|++.+. ..+|++++|++
T Consensus 698 ~vI~LsinE~d~ppPp~V~eAi~eal~~-~~--~--------s~g~pdlr~aLa~~la~~~Gv~~d~-~e~IIvt~Gs~e 765 (1082)
T PLN02672 698 SLIHMDVDESFLPVPSAVKASIFESFVR-QN--I--------SESETDPRPSILQFIKSNYGFPTDS-CTEFVYGDTSLA 765 (1082)
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHhh-cC--C--------CCCChHHHHHHHHHHHHHhCcCCCC-CCEEEEeCCHHH
Confidence 56899999884 689999999886643 11 1 0122356788999999999996541 02699999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.++++|||.|+++. |.|+.|...+...|.+++.+|+.. .+++.+|++++++++++.+.++|+++
T Consensus 766 lL~lll~aLl~pGD~VLVp~--------PtY~~Y~~~a~~~Ga~vv~Vpl~~-e~gf~lD~d~Le~al~~~~~~~I~L~n 836 (1082)
T PLN02672 766 LFNKLVLCCVQEGGTLCFPA--------GSNGTYVSAAKFLKANFRRIPTKS-SDGFKLTAKTLASTLETVKKPWVYISG 836 (1082)
T ss_pred HHHHHHHHHcCCCCEEEEeC--------CChHHHHHHHHHcCCEEEEEeccc-ccCCCCCHHHHHHHhccCCCCEEEEEC
Confidence 77668899999999999999 666666667778888777776431 24689999999999865234566665
Q ss_pred CC-C-CCCcc---CHHHHHHHHHhcCCEEEEeccccccccccCCC-CCCC-------Cc-----ceEEEeCCCCCC--CC
Q 023191 203 AS-A-YARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSPF-------EY-----ADVVTTTTHKSL--RG 262 (286)
Q Consensus 203 ~~-n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~~-------~~-----~D~v~~s~~K~l--~g 262 (286)
|+ | +|... .+++|+++|++||++||+|++++.-....... ...+ .. .-+++.|++|.+ +|
T Consensus 837 PnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpG 916 (1082)
T PLN02672 837 PTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGG 916 (1082)
T ss_pred cCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHH
Confidence 65 6 67554 47788889999999999999975212111100 0000 00 125688999866 45
Q ss_pred CCceEEEEecc-hhhhhcc
Q 023191 263 PRGAMIFFRKG-VKEINKQ 280 (286)
Q Consensus 263 p~gG~l~~~~~-~~~~~~~ 280 (286)
.+-|+++++++ +.+..++
T Consensus 917 LRIGylIap~~eLi~~l~~ 935 (1082)
T PLN02672 917 HEFGFLALNDSVLIDAFHS 935 (1082)
T ss_pred HHheeEEeCCHHHHHHHHH
Confidence 56699999765 6665543
No 177
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=6.8e-18 Score=154.24 Aligned_cols=153 Identities=22% Similarity=0.238 Sum_probs=113.5
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+++.++++.|.+. .+++++|+.++.+++.++++|||+|+++.+.|++..... .......|..+ +.++.
T Consensus 65 Le~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~----~~~~~~~g~~v--~~v~~- 132 (405)
T PRK08776 65 LGEALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLF----NALAKKGHFAL--ITADL- 132 (405)
T ss_pred HHHHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHH----HHHHHhcCcEE--EEECC-
Confidence 4488888888743 588888877777788999999999999987776533211 11111223333 33221
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEE
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~ 253 (286)
.|++++++.+++ +||+|+++ |+| +|...++++|+++|+++|+++|+|++|+.+... .++. ++|+++
T Consensus 133 -----~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~-----~pl~~gaDivv 201 (405)
T PRK08776 133 -----TDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ-----KPLEFGADLVL 201 (405)
T ss_pred -----CCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC-----CcccccCCEEE
Confidence 388999999987 89999997 777 678899999999999999999999998765421 2233 599999
Q ss_pred eCCCCCCCCCC---ceEEEEec
Q 023191 254 TTTHKSLRGPR---GAMIFFRK 272 (286)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~ 272 (286)
+|+||+|+|+. +|++++++
T Consensus 202 ~S~tK~l~g~~~~~~G~vv~~~ 223 (405)
T PRK08776 202 HSTTKYINGHSDVVGGAVVARD 223 (405)
T ss_pred ecCceeecCCCCceEEEEEeCC
Confidence 99999999885 58777754
No 178
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.77 E-value=2.1e-17 Score=139.66 Aligned_cols=203 Identities=18% Similarity=0.168 Sum_probs=159.6
Q ss_pred eecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHH
Q 023191 50 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVY 129 (286)
Q Consensus 50 ~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l 129 (286)
-|.+|...+|+.|.+|+..-... +.+ +....+-+++.+-++..|....+. .-++.++|..+..+++
T Consensus 20 L~gPGPsnl~~~V~~A~~~~~lg-----h~s-------Pe~~qIm~~v~egikyVFkT~n~~--tf~isgsGh~g~E~al 85 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRPSLG-----HMS-------PEFVQIMDEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAAL 85 (385)
T ss_pred eecCCCcCCCHHHHHhhcCCccc-----cCC-------HHHHHHHHHHHHHHHHHhccCCCc--eEEEecCCcchHHHHH
Confidence 56778778999999999764322 222 344567777888899999885543 3477788888888899
Q ss_pred HHhcCCCCeEEeccCCCCcccCccccccc--cccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc--CCC
Q 023191 130 TALLKPHDRIMALDLPHGGHLSHGYQTDT--KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA 205 (286)
Q Consensus 130 ~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~--~~n 205 (286)
..+++|||+|++.. .+-...+ ...+..|.++.+++ .+ .+....++++++.+.+|++++++++ .+.
T Consensus 86 ~N~lePgd~vLv~~--------~G~wg~ra~D~~~r~ga~V~~v~--~~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsS 154 (385)
T KOG2862|consen 86 VNLLEPGDNVLVVS--------TGTWGQRAADCARRYGAEVDVVE--AD-IGQAVPLEEITEKLSQHKPKAVFVTHGDSS 154 (385)
T ss_pred HhhcCCCCeEEEEE--------echHHHHHHHHHHhhCceeeEEe--cC-cccCccHHHHHHHHHhcCCceEEEEecCcc
Confidence 99999999999987 3322222 23556777777775 33 4568999999999999999999996 666
Q ss_pred CCCccC-HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhcc
Q 023191 206 YARLYD-YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQ 280 (286)
Q Consensus 206 ~g~~~~-l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~~ 280 (286)
+|...| ++.+.++||+|+++++||...+.|.....+..++ +|+......|.+++|.| +.+..++......++
T Consensus 155 TgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewg---VDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~ 228 (385)
T KOG2862|consen 155 TGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWG---VDVAYTGSQKALGAPAGLSIISFSDKALEAIRD 228 (385)
T ss_pred ccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhc---ccEEEecchhhcCCCCCcceeecCHHHHHHHhh
Confidence 898888 7778899999999999999999998887777777 99999999999999999 999998876655553
No 179
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.77 E-value=2.5e-18 Score=155.70 Aligned_cols=163 Identities=13% Similarity=0.046 Sum_probs=116.0
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
++....|| +.++++.|.+. .+++.+|+.|+.+++.++++|||+|+++++.|++.... ........|.
T Consensus 49 nPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~----~~~~~~~~gi 115 (377)
T TIGR01324 49 TLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYF----CDIVLKRMGV 115 (377)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHH----HHHHHHhcCc
Confidence 34556666 77777788653 24444454488889999999999999999766543210 0001122343
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
.++.+ +.+ +.+++++.+++ +||+|+++ ++| ++...|+++|+++|+++|+++++|++|+.|....
T Consensus 116 ~v~~~--d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~----- 181 (377)
T TIGR01324 116 DITYY--DPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK----- 181 (377)
T ss_pred EEEEE--CCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-----
Confidence 33322 211 23789998887 89999997 777 6688999999999999999999999999886632
Q ss_pred CCC-cceEEEeCCCCCCCCCC---ceEEEEecchhh
Q 023191 245 PFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKE 276 (286)
Q Consensus 245 ~~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~ 276 (286)
++. ++|+++.|++|+++|+. ||+++++++..+
T Consensus 182 pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~ 217 (377)
T TIGR01324 182 PLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWD 217 (377)
T ss_pred ccccCceEEEecCceeccCCCCceEEEEEeCHHHHH
Confidence 222 59999999999999875 388888776544
No 180
>PLN02263 serine decarboxylase
Probab=99.77 E-value=1.9e-17 Score=151.43 Aligned_cols=173 Identities=12% Similarity=0.040 Sum_probs=126.3
Q ss_pred hHHHHHHHHHHHHHHHCCCCCC-CcceeEEeCCChH-HHHHHHHHh--cCCCCeEEeccCCCCcccCccccccccccccc
Q 023191 89 YIDMAESLCQKRALEAFRLDPE-KWGVNVQSLSGSP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~-~~~~~v~~~sG~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
...++|+.+.+|+++++|.+.+ .| -.+|+|+| +|+.++.+- ..+...+++++..|.++.. .+.+.
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~---G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~K--------Aa~ll 198 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYW---GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK--------AARMY 198 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCe---EEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHH--------HHHhc
Confidence 4678999999999999999763 33 35677777 887655544 2233366667755555543 56677
Q ss_pred eeeeEEEecccCCCCCCCCHHHHHHHhhhcC--CcEEEEc--CCCCCCccCHHHHHHHHHhcCC-----EEEEecccccc
Q 023191 165 SIFFETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVAG--ASAYARLYDYERIRKVCNKQKA-----IMLADMAHISG 235 (286)
Q Consensus 165 g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~--tk~v~i~--~~n~g~~~~l~~I~~ia~~~~~-----~vivD~a~~~g 235 (286)
|.+++.+| .+ +++.+|+++|++.|.+.. |-+|+.+ .+++|.+.|+++|+++|+++|+ |++||+|.+..
T Consensus 199 gi~~~~Vp--~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~ 275 (470)
T PLN02263 199 RMECVKVD--TL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGL 275 (470)
T ss_pred CCcceEec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhh
Confidence 87777776 44 678999999999997632 4455555 4558899999999999999997 99999996544
Q ss_pred ccccCCCCCCCC---cceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 236 LVAAGVIPSPFE---YADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 236 ~~~~~~~~~~~~---~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
..+.-.....+. .+|.++.++|||++.|.+ |++++|++..
T Consensus 276 ~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~ 319 (470)
T PLN02263 276 MMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHI 319 (470)
T ss_pred HhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhhH
Confidence 443211111233 399999999999999999 9999997643
No 181
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.77 E-value=8.4e-18 Score=152.29 Aligned_cols=166 Identities=20% Similarity=0.235 Sum_probs=122.2
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
.+...+|| +.+++++|.+. .+++.+|+.|+..++.+++++||+|+++.+.|.+...... ..+...|.
T Consensus 39 ~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g~ 105 (369)
T cd00614 39 NPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFE----RLLPKLGI 105 (369)
T ss_pred ChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHH----HHHhhcCe
Confidence 34455666 77777888653 4777778778888999999999999999977766532111 11223454
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
++..+ +.+ |++++++++++ ++++|++. ++| +|...|+++|+++|+++|+++++|++|+.+... .
T Consensus 106 ~~~~v--~~~------d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-----~ 171 (369)
T cd00614 106 EVTFV--DPD------DPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-----R 171 (369)
T ss_pred EEEEe--CCC------CHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-----C
Confidence 44333 222 68999999987 89999997 666 678889999999999999999999998776441 2
Q ss_pred CCC-cceEEEeCCCCCCCCCC---ceEEEEec-chhhhhc
Q 023191 245 PFE-YADVVTTTTHKSLRGPR---GAMIFFRK-GVKEINK 279 (286)
Q Consensus 245 ~~~-~~D~v~~s~~K~l~gp~---gG~l~~~~-~~~~~~~ 279 (286)
++. ++|+++.|++|+++|+. ||++++++ ++.+..+
T Consensus 172 ~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~ 211 (369)
T cd00614 172 PLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLR 211 (369)
T ss_pred hhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHH
Confidence 233 59999999999998764 69999987 6555443
No 182
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=6.4e-18 Score=154.14 Aligned_cols=165 Identities=18% Similarity=0.187 Sum_probs=121.1
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+...++| +.++++.|.+. .+++++|+.++.+++.+++++||+|+++.+.|++...... ..+...|.+
T Consensus 64 p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~----~~~~~~Gi~ 130 (398)
T PRK08249 64 PTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFT----EFLPRMGVD 130 (398)
T ss_pred hHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHH----HHHhhCCeE
Confidence 4445555 77888888754 4888888878887888999999999999977765432211 012234543
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
+..+ + ..|++++++++++ +||+|+++ ++| +|.+.|+++|.++|+++|+++|+|++++.+... .+
T Consensus 131 v~~v--d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~-----~~ 196 (398)
T PRK08249 131 VTLC--E------TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQ-----NP 196 (398)
T ss_pred EEEc--C------CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccC-----Cc
Confidence 3222 2 2589999999987 89999997 777 778899999999999999999999998755322 12
Q ss_pred CC-cceEEEeCCCCCCCCCC---ceEEEEecchhhhhc
Q 023191 246 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINK 279 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~~~~ 279 (286)
+. ++|+++.|++|+++|+. ||+++.++++.+..+
T Consensus 197 l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~ 234 (398)
T PRK08249 197 LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVY 234 (398)
T ss_pred hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHH
Confidence 22 59999999999998764 477777766655443
No 183
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=1.2e-17 Score=153.52 Aligned_cols=150 Identities=17% Similarity=0.167 Sum_probs=113.5
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+...++| +.++++.|.+. .+.+.||+.|+.+++.+++++||+|+++...|++....... .....|.+
T Consensus 64 p~~~~le----~~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~----~l~~~Gi~ 130 (433)
T PRK08134 64 PTVAVLE----ERVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHY----TLRRFGIE 130 (433)
T ss_pred hHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHH----HHhhCCeE
Confidence 3455555 88888888765 37777777777778888899999999999888765432211 01124544
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
++.+ +.+ |++++++++++ +||+|++. ++| ++.+.|+++|+++|+++|+++|+|++|+.+.... +
T Consensus 131 v~~v--d~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~-----p 196 (433)
T PRK08134 131 TTFV--KPG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLR-----P 196 (433)
T ss_pred EEEE--CCC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-----c
Confidence 4433 322 79999999988 99999987 766 6688999999999999999999999998876532 2
Q ss_pred CC-cceEEEeCCCCCCCCCC
Q 023191 246 FE-YADVVTTTTHKSLRGPR 264 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~ 264 (286)
+. ++|++++|+|||++|+.
T Consensus 197 l~~GaD~vv~S~tK~l~g~g 216 (433)
T PRK08134 197 FEHGADLVYHSATKFLGGHG 216 (433)
T ss_pred hhcCCCEEEeccccccCCCC
Confidence 23 59999999999998876
No 184
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=2.3e-18 Score=154.99 Aligned_cols=167 Identities=17% Similarity=0.191 Sum_probs=120.5
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCC-CeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
.+++++++++|++++ +|++|+|++ ++..++++++++| |.|++++ |.|..|...++..|.+++.++
T Consensus 61 ~l~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~--------P~y~~y~~~~~~~G~~~~~v~- 127 (351)
T PRK01688 61 AVIENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCP--------PTYGMYSVSAETIGVEIRTVP- 127 (351)
T ss_pred HHHHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcC--------CCHHHHHHHHHHcCCEEEEee-
Confidence 356888899999885 599999999 8877889999997 9999999 666666656667787776665
Q ss_pred ccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhc--CCEEEEeccccccccccCCCCCCCC-c
Q 023191 174 RLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFE-Y 248 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~-~ 248 (286)
.+ +++.+|++++++.+ + ++++|+++ |+| +|...+.+++.++++.. +++||+|+++.- ..........+. .
T Consensus 128 -~~-~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~-f~~~~s~~~~~~~~ 202 (351)
T PRK01688 128 -TL-DNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIE-FCPQASLAGWLAEY 202 (351)
T ss_pred -cC-CCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhh-cCCCCChHHHHhhC
Confidence 44 45899999999987 4 89999998 666 77888777766666532 689999999632 211100000001 1
Q ss_pred -ceEEEeCCCCCCC--CCCceEEEEecchhhhhcc
Q 023191 249 -ADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 249 -~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~ 280 (286)
.-+++.|++|+|+ |.+-|++++++++.+..++
T Consensus 203 ~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~ 237 (351)
T PRK01688 203 PHLVILRTLSKAFALAGLRCGFTLANEEVINLLLK 237 (351)
T ss_pred CCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHh
Confidence 2377999999874 4444999998887765554
No 185
>PRK06460 hypothetical protein; Provisional
Probab=99.76 E-value=9.1e-18 Score=152.21 Aligned_cols=165 Identities=19% Similarity=0.215 Sum_probs=118.0
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
....+|+ +.+++++|.+. .+++++|+.++..++.++++|||+|+++.+.|+. .|..+...+...|.+
T Consensus 45 p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~----ty~~~~~~~~~~G~~ 111 (376)
T PRK06460 45 PTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGR----SYRFFTDYLKNWGVN 111 (376)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCc----HHHHHHHHHHhhCcE
Confidence 3444555 78888889865 4888888878777889999999999998755443 233333334455655
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
+..++ .+ +.+.+++.+++ +||+|+++ ++| +|.+.|+++|.++|+++|+++|+|++++.+.. .. +
T Consensus 112 v~~~~--~~------~~~~l~~~~~~-~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~---~~--~ 177 (376)
T PRK06460 112 VDASN--PG------SDNIIEKAKSK-RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN---QK--P 177 (376)
T ss_pred EEEEC--CC------CHHHHHHhcCC-CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc---CC--h
Confidence 54443 22 23445555555 89999998 666 77899999999999999999999999865421 11 2
Q ss_pred CC-cceEEEeCCCCCCCCCC---ceEEEEecchhhhhc
Q 023191 246 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINK 279 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~~~~ 279 (286)
+. ++|+++.|++|+|+|++ +|+++.++++.+..+
T Consensus 178 l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~ 215 (376)
T PRK06460 178 LELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVID 215 (376)
T ss_pred hhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHH
Confidence 22 48999999999998875 699888877665444
No 186
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=7.6e-18 Score=152.74 Aligned_cols=203 Identities=16% Similarity=0.150 Sum_probs=137.9
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +++.+.+++.+...... .| +...+. +++ +.+++++|++++ +|++|+|++
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~~~--~Y------~~~~g~-~lr----~~ia~~~~~~~~----~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAELLR--LY------PDPQGR-ALR----EAIAARTGVPAD----RIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHHhh--cC------CCCcHH-HHH----HHHHHHhCcCHH----HEEEcCCHHH
Confidence 56899988874 68888888876432211 23 322332 444 666777888764 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.+++++||+|++.. |.|..+...+...|.+++.++ .+ +++.+|++++++.+++ ++|+|+++
T Consensus 100 ~l~~~~~~~~~~gd~vli~~--------P~y~~~~~~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~~~~-~~~~v~l~~ 167 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLY--------PSFPLHEDYPTMMGARVERVT--VT-PDLGFDLDALCAAVAR-APRMLMFSN 167 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcC--------CChHHHHHHHHHcCCeEEEee--cC-CCCCCCHHHHHHhhhc-CCCEEEEeC
Confidence 77768888999999999998 444443334456676665555 44 4578999999999887 89999887
Q ss_pred CCC-CCCccCHHHHHHHHHh--cCCEEEEeccccccccccCCCCCCC---C--c-ceEEEeCCCCCC--CCCCceEEEE-
Q 023191 203 ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF---E--Y-ADVVTTTTHKSL--RGPRGAMIFF- 270 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~---~--~-~D~v~~s~~K~l--~gp~gG~l~~- 270 (286)
++| +|...+.+++.++++. .++++|+|+++.. ....+..+..+ . + .-+++.|++|.| .|.+-|++++
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 168 PSNPVGSWLTADQLARVLDATPPETLIVVDEAYAE-YAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHH-hcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 777 7888887777666653 4789999999642 22211111111 1 1 237799999987 4556699876
Q ss_pred ecchhhhhc
Q 023191 271 RKGVKEINK 279 (286)
Q Consensus 271 ~~~~~~~~~ 279 (286)
++++.+..+
T Consensus 247 ~~~l~~~~~ 255 (371)
T PRK05166 247 DPELVGLLD 255 (371)
T ss_pred CHHHHHHHH
Confidence 455655443
No 187
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.75 E-value=8.7e-18 Score=153.05 Aligned_cols=156 Identities=22% Similarity=0.248 Sum_probs=115.2
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+++.+++++|.+. .+++++|+.++.+++.+++++||+|+++++.|++..... ...+...|.+++.+ +.+
T Consensus 66 le~~la~l~g~~~-----~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~----~~~~~~~G~~v~~v--d~~ 134 (390)
T PRK08133 66 FQERLAALEGAEA-----CVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLF----EKIFARFGIETTFV--DLT 134 (390)
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHH----HHHHHHcCcEEEEE--CCC
Confidence 4478888888764 255555555888788899999999999997776654321 11223345444433 322
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEE
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~ 253 (286)
|++++++++++ +||+|+++ ++| +|...|+++|+++|+++|+++|+|++++.+... .++. ++|+++
T Consensus 135 ------d~~~l~~~i~~-~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~-----~pl~~g~Divv 202 (390)
T PRK08133 135 ------DLDAWRAAVRP-NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQ-----QPLKLGADVVI 202 (390)
T ss_pred ------CHHHHHHhcCc-CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCCcEEE
Confidence 78999999987 99999997 777 778899999999999999999999998655432 1222 589999
Q ss_pred eCCCCCCCCCC---ceEEEEecchh
Q 023191 254 TTTHKSLRGPR---GAMIFFRKGVK 275 (286)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~~~~ 275 (286)
+|+||+++|+. ||+++.++++.
T Consensus 203 ~S~sK~~~g~g~~~GG~vv~~~~~~ 227 (390)
T PRK08133 203 HSATKYLDGQGRVLGGAVVGSKELM 227 (390)
T ss_pred eecceeecCCcceEeEEEEcCHHHH
Confidence 99999997753 48888877643
No 188
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.75 E-value=4.9e-18 Score=154.26 Aligned_cols=196 Identities=11% Similarity=0.050 Sum_probs=136.9
Q ss_pred CceecCCCCCCCHH-HHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChH-H
Q 023191 48 GLELIPSENFTSVS-VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSP-S 124 (286)
Q Consensus 48 ~i~L~~~e~~~~~~-v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~-a 124 (286)
-++|++|...+++. |++++...+.... . . .....++-+.+++.+++++|++.+. +|++++ +++ +
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~~~~------h---r-~~~f~~~~~~~r~~l~~l~~~~~~~---~v~~~~gs~T~~ 79 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALLGRS------H---R-QKPVKALLKRVIEGTRELLSLPEGY---EVGIVPGSDTGA 79 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhcccC------c---C-CHHHHHHHHHHHHHHHHHhCCCCCc---eEEEECCchHHH
Confidence 46788887777887 9999986443210 0 1 1234567778899999999985332 477664 445 7
Q ss_pred HHHHHHHhcCC-CCeEEeccCCCCcccCcccccccccccccee-eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 125 NFQVYTALLKP-HDRIMALDLPHGGHLSHGYQTDTKKISAVSI-FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 125 ~~~~l~a~~~~-Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
+.+++.+++++ ++.|+. ..+|++.+.. . ..+..|. +++.++. + .+..+|+++++ . +++|.++
T Consensus 80 ~~~~~~~l~~~~~~~vi~-~g~f~~~~~~---~---~~~~~g~~~v~~~~~--~-~g~~~d~~~i~----~--~~~V~~~ 143 (378)
T PRK03080 80 WEMALWSLLGARRVDHLA-WESFGSKWAT---D---VVKQLKLEDPRVLEA--D-YGSLPDLSAVD----F--DRDVVFT 143 (378)
T ss_pred HHHHHHhcCCCCcceEEE-eCHHHHHHHH---H---HHhhcCCCCceEecc--C-CCCCCCHhhcC----C--CCCEEEE
Confidence 77688888875 555555 4566653221 0 0122344 5555543 3 44577877643 2 5667775
Q ss_pred -CC-CCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 203 -AS-AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 203 -~~-n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
.+ .+|...|+++|++ +++|+++++|++|++|..+.++.. +|++++|+||||+||.| |++++++++.+..+
T Consensus 144 h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~-----iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~ 216 (378)
T PRK03080 144 WNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK-----LDVYTFSWQKVLGGEGGHGMAILSPRAVERLE 216 (378)
T ss_pred ecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH-----CcEEEEehhhhCCCCCceEEEEECHHHHHhhh
Confidence 44 4889999999999 889999999999999999877653 79999999999999999 99999988765443
No 189
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.2e-17 Score=153.58 Aligned_cols=155 Identities=15% Similarity=0.123 Sum_probs=115.8
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+++.++++.|.+. .|.++||++++.+++.+++++||+|++++..|+++...... .+...|.+++.+ + +
T Consensus 74 le~~la~l~g~~~-----~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~----~l~~~Gi~v~~v--d-~ 141 (437)
T PRK05613 74 LENRIASLEGGVH-----AVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLV----TLNRLGIEVTFV--E-N 141 (437)
T ss_pred HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHH----HHHhcCeEEEEE--C-C
Confidence 4488888888853 59999999977778888899999999999888876322111 112345444433 2 2
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEe
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTT 254 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~ 254 (286)
. .|++++++++++ +||+|++. ++| ++.+.|+++|+++|+++|+++|+|++|+.|..... ... |+|++++
T Consensus 142 -~---~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p-~~~---GaDivv~ 212 (437)
T PRK05613 142 -P---DDPESWQAAVQP-NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRP-LEL---GADVVVA 212 (437)
T ss_pred -C---CCHHHHHHhCCc-cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccCh-HHh---CCCEEEe
Confidence 1 289999999988 89988885 666 57889999999999999999999999977654211 112 5999999
Q ss_pred CCCCCCCCCC---ceEEEEec
Q 023191 255 TTHKSLRGPR---GAMIFFRK 272 (286)
Q Consensus 255 s~~K~l~gp~---gG~l~~~~ 272 (286)
|+||+++|+. ||+++.+.
T Consensus 213 S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 213 SLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred eccceecCCCcceeEEEEecC
Confidence 9999998764 36566443
No 190
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.75 E-value=1.2e-17 Score=151.47 Aligned_cols=156 Identities=16% Similarity=0.142 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeee
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (286)
....|| +.++++.|.+. .+.++||+.++.+++ ++++|||+|+++++.|++.+.... ..+...|.++
T Consensus 51 ~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~----~~~~~~gi~v 116 (380)
T PRK06176 51 TRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD----KVLVKNGLSC 116 (380)
T ss_pred hHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH----HHHHhcCeEE
Confidence 345555 88888888765 489999988766444 678999999999977765543221 1122344333
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC
Q 023191 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 246 (286)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~ 246 (286)
+.+ + ..|++++++++++ +|++|+++ |+| +|...|+++|.++|+++|+++|+|++++.+... .++
T Consensus 117 ~~v--d------~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~-----~p~ 182 (380)
T PRK06176 117 TII--D------TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQ-----NPL 182 (380)
T ss_pred EEc--C------CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccC-----Ccc
Confidence 322 2 1389999999987 89999996 777 678889999999999999999999998765332 122
Q ss_pred C-cceEEEeCCCCCCCCCC---ceEEEEec
Q 023191 247 E-YADVVTTTTHKSLRGPR---GAMIFFRK 272 (286)
Q Consensus 247 ~-~~D~v~~s~~K~l~gp~---gG~l~~~~ 272 (286)
. ++|++++|++|+++||. ||++.+++
T Consensus 183 ~~gaDivv~S~tK~l~g~~d~~gG~vv~~~ 212 (380)
T PRK06176 183 LLGADIVVHSGTKYLGGHSDVVAGLVTTNN 212 (380)
T ss_pred ccCCCEEEecCceeccCCccceeeEEEecH
Confidence 2 59999999999999875 58888765
No 191
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.75 E-value=1.2e-17 Score=151.63 Aligned_cols=164 Identities=17% Similarity=0.212 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeee
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (286)
...+++ +.+++++|.+. .+++.+|+.++.+++.+++++||+|+++.+.|++.+... ...+...|.++
T Consensus 55 ~~~~le----~~la~l~g~~~-----~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~----~~~~~~~g~~v 121 (380)
T TIGR01325 55 TVAAFE----ERIAALEGAER-----AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFI----SEILPRFGIEV 121 (380)
T ss_pred hHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHH----HHHHHHhCCEE
Confidence 345555 77888888854 366666666888788899999999999887665543211 11222345444
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC
Q 023191 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 246 (286)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~ 246 (286)
+.++ .+ |++++++.+++ ++|+|+++ ++| +|...|+++|.++|+++|+++|+|++++.+... .++
T Consensus 122 ~~v~--~~------d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~-----~pl 187 (380)
T TIGR01325 122 SFVD--PT------DLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQ-----QPL 187 (380)
T ss_pred EEEC--CC------CHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-----Cch
Confidence 4342 22 78999998887 89999997 666 678889999999999999999999998654322 123
Q ss_pred C-cceEEEeCCCCCCCCCC---ceEEEEecchhhhhc
Q 023191 247 E-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINK 279 (286)
Q Consensus 247 ~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~~~~ 279 (286)
. ++|+++.|++|+++|+. ||++++++++.+..+
T Consensus 188 ~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~ 224 (380)
T TIGR01325 188 KLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVA 224 (380)
T ss_pred hhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHH
Confidence 3 59999999999998863 488888877655443
No 192
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.75 E-value=7.9e-17 Score=144.00 Aligned_cols=212 Identities=16% Similarity=0.121 Sum_probs=139.9
Q ss_pred ceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 49 LELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 49 i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
++|..+.++ +++.++.++.+.-.. .....|....+..++++.+++++...++..... .++++++|++ ++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~~~~~~~t~a~ 72 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALR------AGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP--EEIVVTNGAQEAL 72 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhc------cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHHHH
Confidence 356555553 466666666541111 011223445677889988888888877642222 3588888888 87
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCH--HHHHHHhhhcCCcEEEEc-
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY--DQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~--e~l~~~i~~~~tk~v~i~- 202 (286)
..++.++.++||+|+++++.|.++.. .+...|..++.++ .+ +++..+. +.+++.+.+ ++++|+++
T Consensus 73 ~~~~~~~~~~g~~vl~~~~~~~~~~~--------~~~~~~~~~~~i~--~~-~~~~~~~~~~~~~~~~~~-~~~~v~i~~ 140 (350)
T cd00609 73 SLLLRALLNPGDEVLVPDPTYPGYEA--------AARLAGAEVVPVP--LD-EEGGFLLDLELLEAAKTP-KTKLLYLNN 140 (350)
T ss_pred HHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEEe--cc-cccCCccCHHHHHhhcCc-cceEEEEEC
Confidence 87888899999999999976666543 3445565555565 33 3333333 666666665 89999997
Q ss_pred CCC-CCCccCHH---HHHHHHHhcCCEEEEeccccccccccCCC---C-CCCCcceEEEeCCCCCCC--CCCceEEEEec
Q 023191 203 ASA-YARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAAGVI---P-SPFEYADVVTTTTHKSLR--GPRGAMIFFRK 272 (286)
Q Consensus 203 ~~n-~g~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~~~~~~---~-~~~~~~D~v~~s~~K~l~--gp~gG~l~~~~ 272 (286)
++| +|...|++ +|.++|+++|+++|+|++|+.+....... . ....+.|+++.|+||+++ |++.|++++++
T Consensus 141 ~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~ 220 (350)
T cd00609 141 PNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP 220 (350)
T ss_pred CCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH
Confidence 555 67777655 55589999999999999987654432211 1 111147899999999986 34459999998
Q ss_pred -chhhhhcc
Q 023191 273 -GVKEINKQ 280 (286)
Q Consensus 273 -~~~~~~~~ 280 (286)
++.+..+.
T Consensus 221 ~~~~~~~~~ 229 (350)
T cd00609 221 EELLERLKK 229 (350)
T ss_pred HHHHHHHHH
Confidence 67766553
No 193
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=1.2e-17 Score=151.22 Aligned_cols=163 Identities=11% Similarity=0.026 Sum_probs=121.3
Q ss_pred CcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccce
Q 023191 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (286)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (286)
+++....|| +.++.+-|.+. .+++.||+.|+.+++.+++++||+|++++..|++...... ....-.|
T Consensus 60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~----~~l~~~G 126 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCS----KILSKLG 126 (395)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHH----HHHHhcC
Confidence 445566677 67777777654 4888888888877888999999999999866665543221 1112235
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcC--CEEEEeccccccccccCC
Q 023191 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGV 241 (286)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~--~~vivD~a~~~g~~~~~~ 241 (286)
.++..+. ..|.+++++++++ +||+|++. ++| ++.+.|+++|+++||+++ +++++|++++.|.. .+.
T Consensus 127 i~v~~vd--------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~p 196 (395)
T PRK08114 127 VTTTWFD--------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKA 196 (395)
T ss_pred cEEEEEC--------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCH
Confidence 4444332 1378999999987 89999997 777 678999999999999984 99999999988765 333
Q ss_pred CCCCCCcceEEEeCCCCCCCCCC--c-eEEEEecch
Q 023191 242 IPSPFEYADVVTTTTHKSLRGPR--G-AMIFFRKGV 274 (286)
Q Consensus 242 ~~~~~~~~D~v~~s~~K~l~gp~--g-G~l~~~~~~ 274 (286)
... |+|+++.|+|||++|+. + |+++.++++
T Consensus 197 l~~---GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~ 229 (395)
T PRK08114 197 LDF---GIDISIQAGTKYLVGHSDAMIGTAVANARC 229 (395)
T ss_pred HHc---CCcEEEEcCcccccCCCcceeEEEEcCHHH
Confidence 333 49999999999999994 3 877776654
No 194
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.75 E-value=3.3e-18 Score=154.21 Aligned_cols=165 Identities=22% Similarity=0.291 Sum_probs=123.2
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
+..+.+++.||++. ..++++|+| ++.++++++++|||+|++++..|.|.+. ++.+.|+.++.++-.
T Consensus 70 eAe~~aA~~fGAd~-----t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~--------alil~ga~Pvyi~p~ 136 (417)
T PF01276_consen 70 EAEELAARAFGADK-----TFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYN--------ALILSGAIPVYIPPE 136 (417)
T ss_dssp HHHHHHHHHHTESE-----EEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHH--------HHHHHTEEEEEEEEE
T ss_pred HHHHHHHHhcCCCe-----EEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCCeEEEecCC
Confidence 35588999999986 588999999 9999999999999999999999998865 445777766666533
Q ss_pred cCCCC---CCCCH-----HHHHHHhhhc-CCcE---EEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCC
Q 023191 175 LNEST---GYIDY-----DQLEKSATLF-RPKL---IVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 241 (286)
Q Consensus 175 ~~~~~---~~~d~-----e~l~~~i~~~-~tk~---v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~ 241 (286)
+.+. +.+++ +.++++++++ ..|. ++++.++ .|.+.++++|+++|++++++|++|+||++......+
T Consensus 137 -~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~l 215 (417)
T PF01276_consen 137 -DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPL 215 (417)
T ss_dssp -E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGG
T ss_pred -ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCC
Confidence 3221 24556 9999999863 2244 8887566 789999999999999999999999999876554444
Q ss_pred CCCCCC-cce-------EEEeCCCCCCCCCCc-eEEEEecch
Q 023191 242 IPSPFE-YAD-------VVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 242 ~~~~~~-~~D-------~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
....+. ++| +++.|+||++++... ++|..+++.
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~ 257 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDR 257 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCC
T ss_pred ccchhhccCccccccceeeeechhhcccccccceEEEecCCC
Confidence 444343 688 999999999998766 999998875
No 195
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.74 E-value=1e-16 Score=146.81 Aligned_cols=204 Identities=14% Similarity=0.163 Sum_probs=132.7
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +++.+.+++.+.+.+.... .....|++..+..++++++++++.+. +++++ +|++|+|++
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~d----~I~it~Ga~~ 106 (402)
T TIGR03542 34 DIIRLGIGDTTQPLPASVIEAFHNAVDELASE--ETFRGYGPEQGYPFLREAIAENDYRG-RIDPE----EIFISDGAKC 106 (402)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHHHHHHHHHHhc-CCCHH----HEEECCCcHH
Confidence 46889888885 5888889888776542100 01122445567788887777765322 46664 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee-----------eeEEEecccCC-CCCCCCHHHHHHHh
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI-----------FFETMPYRLNE-STGYIDYDQLEKSA 191 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~~~-~~~~~d~e~l~~~i 191 (286)
++.. +..++.+||+|++++|.|..+ ...+...|. .+..++ .+. +++.+|+++
T Consensus 107 al~~-l~~l~~~gd~Vlv~~P~y~~~--------~~~~~~~g~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~----- 170 (402)
T TIGR03542 107 DVFR-LQSLFGSDNTVAVQDPVYPAY--------VDSNVMAGRAGVLDDDGRYSKITYLP--CTKENNFIPDLPE----- 170 (402)
T ss_pred HHHH-HHHhcCCCCEEEEeCCCCcch--------HHHHHHcCCccccccccccceEEEee--cchhhCCCCCccc-----
Confidence 7764 566779999999999555443 334445554 444444 432 245555432
Q ss_pred hhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCC---CCc---ceEEEeCCCCCC
Q 023191 192 TLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP---FEY---ADVVTTTTHKSL 260 (286)
Q Consensus 192 ~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~---~~~---~D~v~~s~~K~l 260 (286)
.+ ++++|+++ |+| +|...+ +++|+++|++|+++||+|+++.. ....+..+.+ +.. .-+++.|++|.|
T Consensus 171 ~~-~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 248 (402)
T TIGR03542 171 EP-KIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSA-FISDPSLPHSIFEIPGAKECAIEFRSFSKTA 248 (402)
T ss_pred cC-CceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhh-hccCCCCCcchhhCCCCcccEEEEecCcccc
Confidence 13 78999997 666 776665 78899999999999999999653 2221111111 111 236689999987
Q ss_pred C--CCCceEEEEecchh
Q 023191 261 R--GPRGAMIFFRKGVK 275 (286)
Q Consensus 261 ~--gp~gG~l~~~~~~~ 275 (286)
+ |.|-|++++++++.
T Consensus 249 g~pGlRiG~~i~~~~l~ 265 (402)
T TIGR03542 249 GFTGVRLGWTVVPKELT 265 (402)
T ss_pred CCCCcceEEEEecHHHh
Confidence 4 44559999987754
No 196
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.74 E-value=2.3e-17 Score=148.85 Aligned_cols=216 Identities=14% Similarity=0.131 Sum_probs=144.3
Q ss_pred cCceecCCCCCC------CHHHHHHhcc-ccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcce-eEEe
Q 023191 47 KGLELIPSENFT------SVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGV-NVQS 118 (286)
Q Consensus 47 ~~i~L~~~e~~~------~~~v~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~-~v~~ 118 (286)
+.|+|..+++.. ++.+++++.+ ...... ...|+...+..++++++.+++.+..|.+.+. . +|++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~~i~~ 73 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSS------FLGYPPPQGYPELREAIADFLGRRYGVPVDP--EANILV 73 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTG------CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG--GEGEEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccc------cccCCCchhhHHHHHHHHHHhhhccCccccc--ceEEEE
Confidence 357887777643 3555555544 121111 1224666788899988888888666663332 3 6999
Q ss_pred CCChH-HHHHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--
Q 023191 119 LSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-- 194 (286)
Q Consensus 119 ~sG~~-a~~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-- 194 (286)
++|+. ++..++..+ .++||.|++++ |.|+.+...+...|..+..+++... +++.+|++++++.+++.
T Consensus 74 ~~G~~~~~~~~~~~~~~~~~~~vlv~~--------P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~ 144 (363)
T PF00155_consen 74 TSGAQAALFLLLRLLKINPGDTVLVPD--------PCYPSYIEAARLLGAEVIPVPLDSE-NDFHLDPEALEEALDELPS 144 (363)
T ss_dssp ESHHHHHHHHHHHHHHSSTTSEEEEEE--------SSSTHHHHHHHHTTSEEEEEEEEET-TTTEETHHHHHHHHHTSHT
T ss_pred ecccccchhhhhhcccccccccceecC--------CccccccccccccCceeeecccccc-ccccccccccccccccccc
Confidence 99999 666566777 78999999999 5555555566677877766665433 57899999999998863
Q ss_pred ---CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccC-CC--CCCCC-cc-eEEEeCCCCCCC
Q 023191 195 ---RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG-VI--PSPFE-YA-DVVTTTTHKSLR 261 (286)
Q Consensus 195 ---~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~--~~~~~-~~-D~v~~s~~K~l~ 261 (286)
++++|+++ ++| +|...+ +++|+++|++|++++|+|++|........ .. ...+. +. .+++.|++|.|+
T Consensus 145 ~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 224 (363)
T PF00155_consen 145 KGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFG 224 (363)
T ss_dssp TTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTT
T ss_pred cccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeecccccc
Confidence 45788887 666 776665 45556669999999999999765444311 00 01111 12 378999999874
Q ss_pred CC--CceEEEEecchhhhhc
Q 023191 262 GP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 262 gp--~gG~l~~~~~~~~~~~ 279 (286)
.| +.|++++++++.+..+
T Consensus 225 ~~GlRvG~i~~~~~~~~~l~ 244 (363)
T PF00155_consen 225 LPGLRVGYIVAPPELIERLR 244 (363)
T ss_dssp SGGGTEEEEEEEHHHHHHHH
T ss_pred ccccccccccchhhhhhhhh
Confidence 33 3499999887776554
No 197
>PLN02242 methionine gamma-lyase
Probab=99.74 E-value=2.1e-17 Score=151.47 Aligned_cols=168 Identities=13% Similarity=0.060 Sum_probs=118.1
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
.+...+|| +.+++++|.+. .+++.+|+.++.+++.+++++||+|+++.+.|+++....... .....|.
T Consensus 75 ~Pt~~~LE----~~lA~l~g~~~-----~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~---~~~~~G~ 142 (418)
T PLN02242 75 NPTVLNLG----RQMAALEGTEA-----AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHF---LPRKCNI 142 (418)
T ss_pred ChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHh---hhhccCc
Confidence 34455666 88888899875 255555555888899999999999999996665443211100 0122443
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
.+ ..++. .|++++++++++.+||+|+++ ++| +|.+.++++|+++|++||++||+|++|..... +....
T Consensus 143 ~~--~~~d~------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~--~~~~~ 212 (418)
T PLN02242 143 TT--TFVDI------TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL--SPARL 212 (418)
T ss_pred eE--EEcCC------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC--CHHHc
Confidence 33 22221 389999999976349999997 777 77888999999999999999999999753221 11111
Q ss_pred CCCcceEEEeCCCCCCCCCC---ceEEEEecchhhhhc
Q 023191 245 PFEYADVVTTTTHKSLRGPR---GAMIFFRKGVKEINK 279 (286)
Q Consensus 245 ~~~~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~~~~ 279 (286)
++|+++.|++|+++|+. ||++++++++.+..+
T Consensus 213 ---g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~ 247 (418)
T PLN02242 213 ---GADVVVHSISKFISGGADIIAGAVCGPAELVNSMM 247 (418)
T ss_pred ---CCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHH
Confidence 48999999999997653 699998877665544
No 198
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=4e-17 Score=150.16 Aligned_cols=156 Identities=17% Similarity=0.166 Sum_probs=114.8
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+....|+ +.++++.|.+. .+++.+|+.++.+++.+++++||+|+++++.|++.+... ...+...|.+
T Consensus 64 p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~----~~~~~~~Gv~ 130 (431)
T PRK08248 64 PTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLF----AHTLPKLGIT 130 (431)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHH----HHHHHhCCEE
Confidence 3455555 77888888654 477777777887788899999999999997776554322 1122345654
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
++.+ +. .|++++++++++ ++++|+++ ++| +|...|+++|+++|+++|+++|+|++++.+... .+
T Consensus 131 v~~v--d~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~-----~p 196 (431)
T PRK08248 131 VKFV--DP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLL-----RP 196 (431)
T ss_pred EEEE--CC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccC-----Ch
Confidence 4444 22 389999999987 89999997 667 778899999999999999999999997644322 22
Q ss_pred CC-cceEEEeCCCCCCCCCCc--eEEEE
Q 023191 246 FE-YADVVTTTTHKSLRGPRG--AMIFF 270 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~g--G~l~~ 270 (286)
+. ++|+++.|+||+++|+.. |.+++
T Consensus 197 l~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 197 IEHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred hHcCCCEEEEcCccccCCCCCceEEEEE
Confidence 23 599999999999998853 44444
No 199
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.74 E-value=5.1e-17 Score=149.50 Aligned_cols=222 Identities=13% Similarity=0.086 Sum_probs=138.4
Q ss_pred HcCceecCCCCCC----CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 46 WKGLELIPSENFT----SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 46 ~~~i~L~~~e~~~----~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
.+.++|..+.+.. .+.+.+++.+.+...- .......|+...+..+|++++.+++.+.+|++.+. .+|++|+|
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~--~~I~it~G 105 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGK--LTEALGNYDGPQGKDELIEALAALLNERYGWNISP--QNIALTNG 105 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcc--cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh--hhEEEccC
Confidence 3568998776632 2355666655543310 00111235666778899999999999888764332 36999999
Q ss_pred hH-HHHHHHHHhcC-----CCCeEEe-ccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc
Q 023191 122 SP-SNFQVYTALLK-----PHDRIMA-LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (286)
Q Consensus 122 ~~-a~~~~l~a~~~-----~Gd~Vl~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~ 194 (286)
++ ++.+++.++++ +||.|++ .+|.|+.+...... .+ .+.+.....++++.+...+.+|+++++ +.+
T Consensus 106 a~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~- 178 (416)
T PRK09440 106 SQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE---ED-LFVSYRPNIELLPEGQFKYHVDFEHLH--IDE- 178 (416)
T ss_pred hHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc---cC-ceeecccccccccccccccCCCHHHcc--cCC-
Confidence 99 88778888885 6999999 68666554321100 00 011212223333221113679999997 344
Q ss_pred CCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccccccc---CCCCCCCCcceEEEeCCCCC-CCCCCc
Q 023191 195 RPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSPFEYADVVTTTTHKS-LRGPRG 265 (286)
Q Consensus 195 ~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~~~~~~~~D~v~~s~~K~-l~gp~g 265 (286)
++++++++ |+| +|...+ +++|+++|++|+++||+|+++....... +..+ .....-+++.|++|+ +.|.+.
T Consensus 179 ~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~-~~~~~vI~~~SfSK~~~pGlRi 257 (416)
T PRK09440 179 DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATP-LWNPNIILCMSLSKLGLPGVRC 257 (416)
T ss_pred CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCc-cccCCeEEEecccccCCCcceE
Confidence 78899987 766 776655 7788899999999999999975211000 1100 001133778999995 345556
Q ss_pred eEEEEecchhhhhc
Q 023191 266 AMIFFRKGVKEINK 279 (286)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (286)
|++++++++.+...
T Consensus 258 G~~i~~~~l~~~~~ 271 (416)
T PRK09440 258 GIVIADEEIIEALS 271 (416)
T ss_pred EEEeCCHHHHHHHH
Confidence 99999887765544
No 200
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=5e-17 Score=149.58 Aligned_cols=150 Identities=21% Similarity=0.238 Sum_probs=113.6
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+.+.++++.|.+. .+.+.+|+.++.+++.++++|||+|+++.+.|++...... ..+...|..++.+ +.
T Consensus 68 le~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~----~~~~~~G~~v~~v--d~- 135 (427)
T PRK05994 68 LEERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFG----HAFKSFGWQVRWA--DA- 135 (427)
T ss_pred HHHHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHH----HHHHhcCcEEEEE--CC-
Confidence 3378888888765 4888888888888999999999999999987776533211 1112345444333 22
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEE
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~ 253 (286)
.|++++++++++ +||+|+++ ++| +|.+.|+++|.++|+++|+++|+|++|+.+... .++. ++|+++
T Consensus 136 -----~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-----~pl~~gaDivv 204 (427)
T PRK05994 136 -----DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-----RPIEHGADIVV 204 (427)
T ss_pred -----CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-----CccccCCcEEE
Confidence 278999999987 89999997 777 678889999999999999999999999866432 2233 599999
Q ss_pred eCCCCCCCCCCc---eEEE
Q 023191 254 TTTHKSLRGPRG---AMIF 269 (286)
Q Consensus 254 ~s~~K~l~gp~g---G~l~ 269 (286)
.|+||+++|+.+ |+++
T Consensus 205 ~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 205 HSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred EcCccccCCCCCcEEEEEE
Confidence 999999988764 5444
No 201
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.74 E-value=3.1e-17 Score=153.47 Aligned_cols=174 Identities=16% Similarity=0.125 Sum_probs=122.6
Q ss_pred cchHHHHHHHHHHHHHHHCCCCC-----------CCcceeEEeCCChH-HHHHHHHHh----cC----------------
Q 023191 87 NEYIDMAESLCQKRALEAFRLDP-----------EKWGVNVQSLSGSP-SNFQVYTAL----LK---------------- 134 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~-----------~~~~~~v~~~sG~~-a~~~~l~a~----~~---------------- 134 (286)
++...++|+.+.+|++++++..+ +. ..-.+++|++ +++.++.+- +.
T Consensus 124 spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~--~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~ 201 (522)
T TIGR03799 124 SKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADH--SLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAA 201 (522)
T ss_pred CcchHHHHHHHHHHHHHHhccCcccchhhcccCCCC--CCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhh
Confidence 45567999999999999985211 11 1245677877 777654432 11
Q ss_pred ------CCCeEEeccCCCCcccCcccccccccccccee---eeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc
Q 023191 135 ------PHDRIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG 202 (286)
Q Consensus 135 ------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~ 202 (286)
++..|++++.+|.++.. .+.+.|. .++.+| ++ +++.+|+++|++.+.+ .+++.+.+.
T Consensus 202 ~~~~~~~~~~v~~S~~~H~S~~k--------aa~~lglg~~~v~~vp--~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vv 270 (522)
T TIGR03799 202 LKHYGYDGLAILVSERGHYSLGK--------AADVLGIGRDNLIAIK--TD-ANNRIDVDALRDKCAELAEQNIKPLAIV 270 (522)
T ss_pred hhhccCCceEEEECCCchHHHHH--------HHHHcCCCcccEEEEE--eC-CCCcCCHHHHHHHHHHHHHCCCCcEEEE
Confidence 23467778877777643 2334443 355565 45 5689999999998863 245555442
Q ss_pred ----CCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC---CCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 203 ----ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 203 ----~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
.+.+|.+.|+++|+++|+++|+|+++|+||+.+....+... ..++++|++++++|||+++|.| |++++|+.
T Consensus 271 ataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~ 349 (522)
T TIGR03799 271 GVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP 349 (522)
T ss_pred EEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH
Confidence 33488999999999999999999999999887665433211 2233599999999999999999 99999874
No 202
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=3.4e-17 Score=148.79 Aligned_cols=152 Identities=20% Similarity=0.190 Sum_probs=110.9
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
++++++++.|.+ .+++++|++ ++..++.++++|||+|+++++.|++....... .....+..+ .. +
T Consensus 57 L~~~lA~l~g~~------~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~----~~~~~gi~v--~~--v 122 (386)
T PRK08045 57 VQRALAELEGGA------GAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDS----LAKRGCYRV--LF--V 122 (386)
T ss_pred HHHHHHHHhCCC------eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHH----HHhhCCeEE--EE--e
Confidence 447888888853 266666666 88778889999999999999777654322110 011112122 22 1
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEE
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVV 252 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v 252 (286)
+ ..|++++++.+++ +||+|+++ |+| +|...|+++|.++|+++|+++++|+++..+... .++. ++|++
T Consensus 123 d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-----~pl~~gaDiv 192 (386)
T PRK08045 123 D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-----NPLALGADLV 192 (386)
T ss_pred C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-----CchhhCCCEE
Confidence 2 2589999999987 89999998 666 678889999999999999999999998765432 2233 59999
Q ss_pred EeCCCCCCCCCC---ceEEEEec
Q 023191 253 TTTTHKSLRGPR---GAMIFFRK 272 (286)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~ 272 (286)
+.|+|||++|+. +|++++++
T Consensus 193 v~S~tK~l~G~~d~~~G~vi~~~ 215 (386)
T PRK08045 193 LHSCTKYLNGHSDVVAGVVIAKD 215 (386)
T ss_pred EeecceeccCCCCceeEEEEeCc
Confidence 999999999987 47777754
No 203
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.74 E-value=7.9e-17 Score=147.42 Aligned_cols=178 Identities=17% Similarity=0.137 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH--HHHHHHHHhc--C-CCCeEEeccCCCCcccCcccccccccccc
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--SNFQVYTALL--K-PHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~--a~~~~l~a~~--~-~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
....+...+.+++++++|++... ..++++|++ ++.+++.++- . +||+|+++...|.+... .+.+
T Consensus 102 ~~~~l~~~~e~~~~~~~G~~~~~---~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~k--------Ai~~ 170 (444)
T TIGR03531 102 LLYKLTNKLVKDFLKLLGLRSIK---SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIK--------AIST 170 (444)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCC---EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHH--------HHHH
Confidence 35677778889999999997321 244445555 5554555542 2 69999999977766654 4567
Q ss_pred ceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCCCC--CccCHHHHHHHHHhcCCEEEEeccccccccc
Q 023191 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (286)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n~g--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (286)
.|.+++.++...+++++.+|+++|+++|++. ++++++++ ++.++ ...|+++|+++|++||+++|+|+||+.+...
T Consensus 171 ~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~ 250 (444)
T TIGR03531 171 AGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK 250 (444)
T ss_pred cCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh
Confidence 8877777764345567899999999999862 34555555 44333 6889999999999999999999998865432
Q ss_pred cC-CCCCCCC--cceEEEeCCCCCCCCCCc-eEEEEec-chhhh
Q 023191 239 AG-VIPSPFE--YADVVTTTTHKSLRGPRG-AMIFFRK-GVKEI 277 (286)
Q Consensus 239 ~~-~~~~~~~--~~D~v~~s~~K~l~gp~g-G~l~~~~-~~~~~ 277 (286)
.. +....+. .+|++++|+||++..|.+ |++++++ ++.+.
T Consensus 251 ~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~ 294 (444)
T TIGR03531 251 YMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQE 294 (444)
T ss_pred hhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHH
Confidence 11 1111122 379999999999988765 7777855 44433
No 204
>PLN02880 tyrosine decarboxylase
Probab=99.74 E-value=3.7e-17 Score=152.51 Aligned_cols=177 Identities=11% Similarity=0.060 Sum_probs=121.8
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcc---eeEEeCCChH-HHHHHHHHh----cC------CCC-eEEeccCCCCcccC
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWG---VNVQSLSGSP-SNFQVYTAL----LK------PHD-RIMALDLPHGGHLS 151 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~---~~v~~~sG~~-a~~~~l~a~----~~------~Gd-~Vl~~~~~~~~~~~ 151 (286)
++...++|+.+.+|+++++|.+.+.|. ..-++|+|++ +++.++.+- ++ ... .|++++..|.+...
T Consensus 117 sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~K 196 (490)
T PLN02880 117 SPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQK 196 (490)
T ss_pred CcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHH
Confidence 355779999999999999999753210 1245567766 776544332 11 112 33445544444432
Q ss_pred ccccccccccccceee---eEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc--CCCCCCccCHHHHHHHHHh
Q 023191 152 HGYQTDTKKISAVSIF---FETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG--ASAYARLYDYERIRKVCNK 221 (286)
Q Consensus 152 ~~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~--~~n~g~~~~l~~I~~ia~~ 221 (286)
.+.+.|.. ++.+|.+.+ +++.+|+++|++.|.+. .|-+|+.+ .+++|.+.|+++|+++|++
T Consensus 197 --------aa~~lGlg~~~v~~Vp~d~~-~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~ 267 (490)
T PLN02880 197 --------ACQIAGIHPENCRLLKTDSS-TNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKS 267 (490)
T ss_pred --------HHHHcCCCHHHEEEeecCCC-cCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHH
Confidence 45566653 556663322 46799999999999642 24455554 5558899999999999999
Q ss_pred cCCEEEEeccccccccccCCCC---CCCCcceEEEeCCCCCCCCCCc-eEEEEec
Q 023191 222 QKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (286)
Q Consensus 222 ~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~ 272 (286)
||+|++||+||+.+........ ..+.++|+++.++|||++.|.+ |++++++
T Consensus 268 ~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~ 322 (490)
T PLN02880 268 NGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKD 322 (490)
T ss_pred cCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeC
Confidence 9999999999887765432211 2234699999999999999999 9999986
No 205
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.74 E-value=5.5e-17 Score=149.37 Aligned_cols=203 Identities=16% Similarity=0.131 Sum_probs=145.7
Q ss_pred CCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh
Q 023191 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~ 132 (286)
....+++.+.+++...+..+. +.++ ......++|+.+..+++++++.+.+. .-.+|+|+| +++.++.+.
T Consensus 70 ~~~~~~~~a~~~~~~~~~~nl--~d~~-----~~p~a~~~E~~~v~~l~~l~~~~~~~---~G~~t~GgTean~lal~aa 139 (460)
T COG0076 70 CPTRVPPVAAELLVSALNKNL--GDPD-----ESPAAAELEERVVNMLSDLLGAPEEA---SGTFTSGGTEANLLALLAA 139 (460)
T ss_pred CCCCCHHHHHHHHHHHHhhcC--CCcc-----cChhHHHHHHHHHHHHHHHhCCCCCC---ceEEEcChHHHHHHHHHHH
Confidence 344567788888888776533 2221 22356799999999999999996432 467788888 887655544
Q ss_pred cC-----CC---C------eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcE
Q 023191 133 LK-----PH---D------RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (286)
Q Consensus 133 ~~-----~G---d------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~ 198 (286)
-+ .+ . +|+++...|.++.. .+.+.|.+.+.++... .+.++|++++++++++ ++..
T Consensus 140 r~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~K--------aa~~lG~~~~~v~~~~--~~~~id~~~l~~~i~~-~t~~ 208 (460)
T COG0076 140 RERWRKRALAESGKPGGKPNIVCSETAHFSFEK--------AARYLGLGLRRVPTVP--TDYRIDVDALEEAIDE-NTIG 208 (460)
T ss_pred HHHHHHHhhhcccccCCCCeEEecCcchhHHHH--------HHHHhCCCceeEEecc--CccccCHHHHHHHHHh-hccC
Confidence 11 11 1 58887755555543 5667888788787442 2689999999999998 5543
Q ss_pred --EEEc--CCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC----CCCCCcceEEEeCCCCCCCCCCc-eEEE
Q 023191 199 --IVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRGPRG-AMIF 269 (286)
Q Consensus 199 --v~i~--~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~v~~s~~K~l~gp~g-G~l~ 269 (286)
|+.+ .+.+|.+.|+++|+++|+++++|+|||+|.+....+.... ...++++|.++.++|||+..|.| |+++
T Consensus 209 g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il 288 (460)
T COG0076 209 GVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVL 288 (460)
T ss_pred ceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEE
Confidence 4443 5558899999999999999999999999955444433222 23345799999999999999999 9999
Q ss_pred Eecc--hhhh
Q 023191 270 FRKG--VKEI 277 (286)
Q Consensus 270 ~~~~--~~~~ 277 (286)
+|++ +.+.
T Consensus 289 ~rd~e~l~~~ 298 (460)
T COG0076 289 FRDEEALRRI 298 (460)
T ss_pred EECHHHhhhh
Confidence 9986 4443
No 206
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.74 E-value=6.9e-17 Score=149.98 Aligned_cols=172 Identities=16% Similarity=0.130 Sum_probs=126.7
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccce
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (286)
.+..+...+.++++++++|++.+ ++.+++|++ ++.+++.++ ..+||+|+++++.|+++...... .+...|
T Consensus 108 ~g~~~~~~e~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~----~~~~~G 179 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKT----YLKGQG 179 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHH----HHHhCC
Confidence 33444444556788999999874 599999999 666677777 48999999999888776543221 011246
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCccCHHHHHHHHHhcCCEEEE--eccccccccccCCC
Q 023191 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLA--DMAHISGLVAAGVI 242 (286)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n~g~~~~l~~I~~ia~~~~~~viv--D~a~~~g~~~~~~~ 242 (286)
.+++.++ .+ ++ .+|++++++++++ +|++|+++ ++++|.+.|+++|+++|+++|+++++ |.. +.|.+... .
T Consensus 180 ~~~~~v~--~~-~~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~-~ 252 (447)
T PRK00451 180 IEVVEVP--YE-DG-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPP-G 252 (447)
T ss_pred cEEEEec--CC-CC-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCc-c
Confidence 5566565 44 34 8999999999987 89999997 63488899999999999999999998 544 34433211 1
Q ss_pred CCCCCcceEEEeCCCCC-----CCCCCceEEEEecchhhh
Q 023191 243 PSPFEYADVVTTTTHKS-----LRGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 243 ~~~~~~~D~v~~s~~K~-----l~gp~gG~l~~~~~~~~~ 277 (286)
.. ++|++++++||| ++||+.|++++++++.+.
T Consensus 253 ~~---~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~ 289 (447)
T PRK00451 253 EY---GADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQ 289 (447)
T ss_pred cC---CCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhh
Confidence 12 599999999996 788866999999887665
No 207
>PRK05968 hypothetical protein; Provisional
Probab=99.74 E-value=3e-17 Score=149.50 Aligned_cols=161 Identities=14% Similarity=0.118 Sum_probs=119.3
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeee
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (286)
...+|| +.+++++|.+. .+++++|+.++.+++.++++|||+|+++.+.|.+.+... ...+...|.++
T Consensus 64 ~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G~~v 130 (389)
T PRK05968 64 TVRAFE----EMLAKLEGAED-----ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLF----ETILKRMGVEV 130 (389)
T ss_pred hHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHH----HHHHHHcCceE
Confidence 345555 78888889865 488888888887788889999999999997776653321 11223345444
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC
Q 023191 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 246 (286)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~ 246 (286)
+.+ +. .|++++++++ + +||+|+++ ++| .+...++++|+++|++||++||+|++|+.+.... ++
T Consensus 131 ~~v--d~------~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-----p~ 195 (389)
T PRK05968 131 DYV--DG------RDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR-----PI 195 (389)
T ss_pred EEe--CC------CCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC-----ch
Confidence 433 21 2889999988 4 79999997 777 5577899999999999999999999987664322 22
Q ss_pred C-cceEEEeCCCCCCCCCC---ceEEEEecchhhh
Q 023191 247 E-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEI 277 (286)
Q Consensus 247 ~-~~D~v~~s~~K~l~gp~---gG~l~~~~~~~~~ 277 (286)
. ++|+++.|++|+++||. ||+++.++++.+.
T Consensus 196 ~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~ 230 (389)
T PRK05968 196 TLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIAR 230 (389)
T ss_pred hcCCcEEEeeccccccCCCCeEEEEEEECHHHHHH
Confidence 2 58999999999999863 5888887765543
No 208
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=4.9e-17 Score=147.46 Aligned_cols=152 Identities=15% Similarity=0.172 Sum_probs=112.0
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+++.++++.|.+. .+++.+|+.++. ++.++++|||+|+++++.|++.+.... ..+...|.+++.+ +
T Consensus 55 Le~~lA~l~g~~~-----~~~~~sG~aai~-~~~~~l~~Gd~Viv~~~~y~~~~~~~~----~~~~~~G~~v~~v--~-- 120 (377)
T PRK07671 55 LEELIAVLEGGHA-----GFAFGSGMAAIT-AVMMLFSSGDHVILTDDVYGGTYRVMT----KVLNRFGIEHTFV--D-- 120 (377)
T ss_pred HHHHHHHHhCCCc-----eEEeCCHHHHHH-HHHHHhCCCCEEEECCCccchHHHHHH----HHHhcCCeEEEEE--C--
Confidence 4488888888765 488999987665 344688999999999977654432111 1112345444333 2
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEE
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~ 253 (286)
..|++++++++++ +||+|+++ |+| +|...++++|.++|+++|+++++|++++.+... .++. ++|+++
T Consensus 121 ----~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~-----~p~~~g~Divv 190 (377)
T PRK07671 121 ----TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQ-----SPISLGADIVL 190 (377)
T ss_pred ----CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccC-----ChhhhCCeEEE
Confidence 1389999999987 89999997 666 678899999999999999999999997654332 1223 589999
Q ss_pred eCCCCCCCCCC---ceEEEEec
Q 023191 254 TTTHKSLRGPR---GAMIFFRK 272 (286)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~ 272 (286)
+|++|+++||. +|++++++
T Consensus 191 ~S~sK~l~G~~~~~~G~~v~~~ 212 (377)
T PRK07671 191 HSATKYLGGHSDVVAGLVVVNS 212 (377)
T ss_pred ecCcccccCCccceeEEEEeCc
Confidence 99999999985 47777765
No 209
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=5e-17 Score=145.51 Aligned_cols=201 Identities=15% Similarity=0.071 Sum_probs=136.9
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +|+.+.+++.+.+......+| +. .+..+++ +.+++++|++++ +|++|+|++
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~-~g~~~lr----~~ia~~~~~~~~----~I~~t~G~~~ 83 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRY------PH-ITSDPLR----EAIAEFYGLDAE----NIAVGNGSDE 83 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccC------CC-CCHHHHH----HHHHHHhCcCcc----eEEEcCCHHH
Confidence 45889888874 578899998877643111123 21 3455566 566666778775 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++..++.++ +||+|+++.| .|..+...+...|..++.++ .+ +++.+|++.+++.. + ++++++++
T Consensus 84 ~l~~~~~~~--~gd~V~v~~P--------~y~~~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~-~-~~~~v~~~~ 148 (337)
T PRK03967 84 LISYLVKLF--EGKHIVITPP--------TFGMYSFYAKLNGIPVIDVP--LK-EDFTIDGERIAEKA-K-NASAVFICS 148 (337)
T ss_pred HHHHHHHHh--CCCeEEEeCC--------ChHHHHHHHHHcCCeEEEee--cC-CCCCcCHHHHHHhc-c-CCCEEEEeC
Confidence 666565555 7999999994 44433334456676665554 44 45789999998865 4 78888887
Q ss_pred CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCCC--CCCceEEEEecchhhh
Q 023191 203 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (286)
|+| +|...+.++|.++++ +++++|+|+++.. ...... ..... ..-+++.|++|.|+ |.|.|++++++++.+.
T Consensus 149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~-~~~~~~-~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~ 225 (337)
T PRK03967 149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAE-FSGKSL-IGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDA 225 (337)
T ss_pred CCCCCCCCCCHHHHHHHHh-cCCEEEEECchhh-hcccch-HHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHH
Confidence 777 788899999999995 7999999999752 211110 00001 12377899999874 4566999998887765
Q ss_pred hcc
Q 023191 278 NKQ 280 (286)
Q Consensus 278 ~~~ 280 (286)
.++
T Consensus 226 ~~~ 228 (337)
T PRK03967 226 LYR 228 (337)
T ss_pred HHh
Confidence 553
No 210
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.73 E-value=2.9e-17 Score=152.42 Aligned_cols=184 Identities=16% Similarity=0.141 Sum_probs=135.8
Q ss_pred ccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccc
Q 023191 83 YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI 161 (286)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~ 161 (286)
+|+...+..+|++++.+++....|+..+. .+|++|+|++ ++.++++.+++|||.|++-+|.|.+.. ...
T Consensus 127 ~y~~~~G~~~LR~~ia~~l~~~~g~~~~~--~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~--------~~~ 196 (459)
T COG1167 127 QYGPTAGLPELREAIAAYLLARRGISCEP--EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL--------QAL 196 (459)
T ss_pred cCCCCCCcHHHHHHHHHHHHHhcCCccCc--CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHH--------HHH
Confidence 35566788999999999998777875543 4699999999 888899999999999999995554443 345
Q ss_pred ccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc--CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccc
Q 023191 162 SAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG--ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISG 235 (286)
Q Consensus 162 ~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~--~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g 235 (286)
+..|.++..+ ++| +..+|+|.|++.+..+++|++++. .+| +|...+ -++|.++|++||++||.|..++.-
T Consensus 197 ~~~g~~~~~v--p~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el 272 (459)
T COG1167 197 EALGARVIPV--PVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGEL 272 (459)
T ss_pred HHcCCcEEec--CCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhh
Confidence 5667555444 454 456899999999988789999997 344 565555 459999999999999999995432
Q ss_pred ccccCCCCCCCC-----cceEEEeCCCCCC-CCCCceEEEEecchhhhhccC
Q 023191 236 LVAAGVIPSPFE-----YADVVTTTTHKSL-RGPRGAMIFFRKGVKEINKQG 281 (286)
Q Consensus 236 ~~~~~~~~~~~~-----~~D~v~~s~~K~l-~gp~gG~l~~~~~~~~~~~~~ 281 (286)
... +....++. +.-+.++|++|++ .|-+.|+++...++.+.+.+.
T Consensus 273 ~~~-~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~ 323 (459)
T COG1167 273 RYD-GPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRL 323 (459)
T ss_pred hcC-CCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHHH
Confidence 221 11121121 2447899999987 555669999998877666543
No 211
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.73 E-value=4.9e-17 Score=147.62 Aligned_cols=156 Identities=20% Similarity=0.188 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
...+++ +.++++.|.+ ++++++|++ ++.+++.+++++||+|+++++.|++.......+ ....+..
T Consensus 52 ~~~~le----~~lA~l~g~~------~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~----~~~~~~~ 117 (382)
T TIGR02080 52 TRDLLQ----QALAELEGGA------GAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNAL----AKKGCFR 117 (382)
T ss_pred hHHHHH----HHHHHHhCCC------cEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHH----HhhcCeE
Confidence 344555 7778888743 378888888 888799999999999999997776543321111 1111222
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
+..+ + ..|++++++++++ +||+|+++ |+| +|...++++|.++|+++|+++++|++|..+... .+
T Consensus 118 v~~~----d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~-----~p 183 (382)
T TIGR02080 118 VLFV----D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQ-----NP 183 (382)
T ss_pred EEEE----C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccC-----Cc
Confidence 2211 2 2389999999987 89999997 666 678899999999999999999999998766432 12
Q ss_pred CC-cceEEEeCCCCCCCCCC---ceEEEEec
Q 023191 246 FE-YADVVTTTTHKSLRGPR---GAMIFFRK 272 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~---gG~l~~~~ 272 (286)
+. ++|+++.|++|+++|+. +|++.+++
T Consensus 184 l~~gaDivv~S~sK~l~G~~~~~~G~i~~~~ 214 (382)
T TIGR02080 184 LALGADLVLHSCTKYLNGHSDVIAGAVIAKD 214 (382)
T ss_pred hhhCCCEEEeecceeccCCCCceeEEEEeCC
Confidence 22 58999999999998865 48877754
No 212
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=4.3e-17 Score=148.62 Aligned_cols=161 Identities=16% Similarity=0.065 Sum_probs=116.8
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
+...+|| +.+++++|.+. +++++|++ ++.+++.++++|||+|+++++.|+++..... ......|.
T Consensus 65 pt~~~Le----~~lA~l~g~~~------~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~----~~~~~~Gi 130 (394)
T PRK07050 65 PTSLALA----QRLAEIEGGRH------ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE----WLARDFGI 130 (394)
T ss_pred HHHHHHH----HHHHHHhCCCe------EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH----HHHHhcCe
Confidence 4445555 77888888653 77777777 8888999999999999999977776542111 11233454
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
.++.+ +.. +.+++++++++ +||+|+++ |+| ++...++++|+++|+++|+++++|++|+.|... .
T Consensus 131 ~v~~v--d~~------~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~-----~ 196 (394)
T PRK07050 131 TVRFY--DPL------IGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF-----K 196 (394)
T ss_pred EEEEE--CCC------CHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-----C
Confidence 44333 211 45788888887 89999997 666 558889999999999999999999998887542 1
Q ss_pred CCC-cceEEEeCCCCCCCCCC---ceEEEEec-chhh
Q 023191 245 PFE-YADVVTTTTHKSLRGPR---GAMIFFRK-GVKE 276 (286)
Q Consensus 245 ~~~-~~D~v~~s~~K~l~gp~---gG~l~~~~-~~~~ 276 (286)
++. |+|+++.|++|+++|.. ||++++++ ++.+
T Consensus 197 ~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~ 233 (394)
T PRK07050 197 PFEHGVDISVQALTKYQSGGSDVLMGATITADAELHA 233 (394)
T ss_pred HHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHH
Confidence 222 58999999999997653 67777754 4433
No 213
>PLN02509 cystathionine beta-lyase
Probab=99.73 E-value=4.3e-17 Score=150.48 Aligned_cols=156 Identities=18% Similarity=0.211 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEec
Q 023191 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (286)
Q Consensus 94 ~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (286)
.+++.++++++.|.+. .+.+++|+.++. ++..++++||+|+++++.|+++..... ..+...|..++.+
T Consensus 135 ~~aLE~~lA~leg~e~-----ai~~~SG~aAi~-~il~ll~~GD~VI~~~~~y~~t~~ll~----~~l~~~G~~v~~v-- 202 (464)
T PLN02509 135 RDALESLLAKLDKADR-----AFCFTSGMAALS-AVTHLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSGVVVKRV-- 202 (464)
T ss_pred HHHHHHHHHHHhCCCE-----EEEeCcHHHHHH-HHHHHhCCCCEEEEcCCchhhHHHHHH----HHHHHCCeEEEEe--
Confidence 4455588888887653 466677766655 445679999999999977765432111 0112345444333
Q ss_pred ccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cce
Q 023191 174 RLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YAD 250 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D 250 (286)
+ ..|++++++++++ +||+|+++ ++| +|...++++|+++|++||+++|+|++|+.+.... ++. ++|
T Consensus 203 d------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~-----pl~~gaD 270 (464)
T PLN02509 203 N------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSR-----PLELGAD 270 (464)
T ss_pred C------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCC-----hhhcCCc
Confidence 2 2378999999987 89999997 777 7788999999999999999999999988775421 222 599
Q ss_pred EEEeCCCCCCCCCC---ceEEEEecc
Q 023191 251 VVTTTTHKSLRGPR---GAMIFFRKG 273 (286)
Q Consensus 251 ~v~~s~~K~l~gp~---gG~l~~~~~ 273 (286)
++++|++|+++|+. ||+++++++
T Consensus 271 ivv~S~tK~l~G~gdv~gG~v~~~~~ 296 (464)
T PLN02509 271 IVMHSATKFIAGHSDVMAGVLAVKGE 296 (464)
T ss_pred EEEecCcccccCCCccceeEEEeccH
Confidence 99999999999865 588887765
No 214
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=1e-17 Score=150.94 Aligned_cols=164 Identities=18% Similarity=0.194 Sum_probs=117.9
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCC-CeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
+++.+++++|++++ +|++|+|++ ++..++.++++|| |+|++++ |.|+.|...+...|.+++.+|
T Consensus 65 Lr~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~--------P~y~~y~~~~~~~g~~v~~v~-- 130 (354)
T PRK04635 65 LINAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFG--------PTYGMYAISAETFNVGVKALP-- 130 (354)
T ss_pred HHHHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcC--------CChHHHHHHHHHcCCEEEEEe--
Confidence 33666777899885 599999999 8887889999999 9999999 555555545566777676665
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhc-CCEEEEeccccccccccCCCCCCCC--cc
Q 023191 175 LNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFE--YA 249 (286)
Q Consensus 175 ~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~~~--~~ 249 (286)
++ +++.+|++.+++ + + ++|+|+++ |+| +|...+.+++.++++.. +++||+|+++.- ............ ..
T Consensus 131 ~~-~~~~~~~~~l~~-~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~-~~~~~s~~~~~~~~~~ 205 (354)
T PRK04635 131 LT-ADYQLPLDYIEQ-L-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIE-FCPEYSVADLLASYPN 205 (354)
T ss_pred cC-CCCCCCHHHHHh-c-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHh-hccCcchHHHHhhCCC
Confidence 44 457899998874 3 4 89999998 777 78889999999988764 699999999642 211100000000 01
Q ss_pred eEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 250 DVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 250 D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
-+++.|++|+++ |.|-|++++++++.+..+
T Consensus 206 ~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~ 237 (354)
T PRK04635 206 LVVLRTLSKAFALAGARCGFTLANEELIEILM 237 (354)
T ss_pred EEEEechHHHhhhhHHHHhhhhCCHHHHHHHH
Confidence 267899999874 445599999988776554
No 215
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.73 E-value=7.6e-17 Score=157.34 Aligned_cols=175 Identities=14% Similarity=0.087 Sum_probs=132.7
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-c-------CCCCeEEeccCCCCcccCccccccc
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-L-------KPHDRIMALDLPHGGHLSHGYQTDT 158 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~-~-------~~Gd~Vl~~~~~~~~~~~~~~~~~~ 158 (286)
+++..++..++..|+++++|.+. +.+...+|+.+.++.++++ . ...+.|+++...|+.+.. +
T Consensus 525 sqG~lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--s---- 594 (939)
T TIGR00461 525 VEGYQELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--S---- 594 (939)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--H----
Confidence 46677888889999999999986 3577777777665444444 1 235689999999988733 2
Q ss_pred cccccceeeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCCCCCccC-HHHHHHHHHhcCCEEEEeccccc
Q 023191 159 KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASAYARLYD-YERIRKVCNKQKAIMLADMAHIS 234 (286)
Q Consensus 159 ~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v~i~-~~n~g~~~~-l~~I~~ia~~~~~~vivD~a~~~ 234 (286)
+...|.+++.++ .+ +++.+|+++|++++++ .+|++|+++ ++|+|...+ +++|+++||++|.++++|+||..
T Consensus 595 --a~~~G~~Vv~V~--~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~ 669 (939)
T TIGR00461 595 --AAMAGMQVVPVN--CD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMN 669 (939)
T ss_pred --HHHCCCEEEEec--cC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChh
Confidence 345676666665 44 5789999999999974 378899887 777887766 99999999999999999999976
Q ss_pred cccccCCCCCCCCcceEEEeCCCCCCC-----CCCc-eEEEEecchhhhh
Q 023191 235 GLVAAGVIPSPFEYADVVTTTTHKSLR-----GPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 235 g~~~~~~~~~~~~~~D~v~~s~~K~l~-----gp~g-G~l~~~~~~~~~~ 278 (286)
+....... .--++|++++|.||+|+ |++| |++++++.+...+
T Consensus 670 al~~l~~P--g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~l 717 (939)
T TIGR00461 670 AQVGLTSP--GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFL 717 (939)
T ss_pred hCCCCCCc--cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhc
Confidence 55433211 11259999999999987 6666 9999998765443
No 216
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=7.3e-17 Score=148.33 Aligned_cols=157 Identities=18% Similarity=0.143 Sum_probs=115.5
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+....|| +.+++++|.+. .++++||+.|+.+++.+++++||+|+++...|.+...... ..+...|.+
T Consensus 69 p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~----~~l~~~Gi~ 135 (436)
T PRK07812 69 PTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFH----YTLPKLGIE 135 (436)
T ss_pred chHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHH----HHhhcCeEE
Confidence 3344555 88888888865 4888888888887889999999999999877765432111 011123433
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
+..+ + + ..|++++++++++ +|++|++. ++| +|.+.|+++|+++|+++|+++|+|++|+.+... .+
T Consensus 136 v~~v--d-d----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~-----~p 202 (436)
T PRK07812 136 VSFV--E-D----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLI-----RP 202 (436)
T ss_pred EEEE--C-C----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-----Cc
Confidence 3322 2 2 1389999999987 89999986 666 789999999999999999999999998876543 22
Q ss_pred CC-cceEEEeCCCCCCCCCCc--eEEEE
Q 023191 246 FE-YADVVTTTTHKSLRGPRG--AMIFF 270 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~g--G~l~~ 270 (286)
+. ++|+++.|+||+++|+.+ |.+++
T Consensus 203 l~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 203 LEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred hhcCCCEEEEecccccCCCCCeEEEEEE
Confidence 33 599999999999988754 44444
No 217
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=9.4e-17 Score=146.98 Aligned_cols=156 Identities=13% Similarity=0.164 Sum_probs=115.8
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+....|| +.++++.|... .+.+.||+.|+.+++.+++++||+|+++.+.|.+...... ..+...|.+
T Consensus 61 Ptv~~lE----~~la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~----~~l~~~Gi~ 127 (432)
T PRK06702 61 PTLAAFE----QKLAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFG----VSLRKLGID 127 (432)
T ss_pred cHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHH----HHHHHCCCE
Confidence 4566666 77888888765 3777778888888889999999999999977765543211 112234544
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
+..+ + ..+|+++++++|++ +||+|++. ++| ++.+.++++|+++|+++|+++++|++.+.+. ...+
T Consensus 128 v~~v--d-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~-----~~~p 194 (432)
T PRK06702 128 VTFF--N-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPY-----LCQA 194 (432)
T ss_pred EEEE--C-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchh-----hCCh
Confidence 4333 2 34789999999998 99999987 666 5578899999999999999999999964322 2233
Q ss_pred CC-cceEEEeCCCCCCCCCCc---eEEE
Q 023191 246 FE-YADVVTTTTHKSLRGPRG---AMIF 269 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~g---G~l~ 269 (286)
++ |+|+++.|.+|+++|..+ |+++
T Consensus 195 l~~GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 195 FEHGANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred hhcCCCEEEEccccccCCCcceeceEEE
Confidence 44 699999999999988765 4444
No 218
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.72 E-value=8.8e-17 Score=147.76 Aligned_cols=153 Identities=16% Similarity=0.161 Sum_probs=112.6
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
+++.+++++|.+. .+++++|+.++..++.+++++||+|+++++.|++.+... ...+...|.+++.++ .
T Consensus 62 le~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G~~v~~v~--~- 129 (418)
T TIGR01326 62 LEQRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLF----KHTLKRLGIEVRFVD--P- 129 (418)
T ss_pred HHHHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHHHHHcCcEEEEEC--C-
Confidence 4488888888753 477777777888788899999999999997776543221 112234554444442 2
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEE
Q 023191 177 ESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~ 253 (286)
.|++++++++++ ++++|+++ ++| +|.+.|+++|.++|+++|+++|+|++++.+... .++. ++|+++
T Consensus 130 -----~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-----~~l~~g~Divv 198 (418)
T TIGR01326 130 -----DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-----RPIDHGADIVV 198 (418)
T ss_pred -----CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-----CchhcCCeEEE
Confidence 189999999987 89999997 666 668889999999999999999999998765321 2222 599999
Q ss_pred eCCCCCCCCCCc--eEEEEec
Q 023191 254 TTTHKSLRGPRG--AMIFFRK 272 (286)
Q Consensus 254 ~s~~K~l~gp~g--G~l~~~~ 272 (286)
.|++|+++|+.. |+++++.
T Consensus 199 ~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 199 HSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred ECccccccCCccceEEEEEec
Confidence 999999987543 6666643
No 219
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.72 E-value=1.3e-16 Score=143.86 Aligned_cols=201 Identities=17% Similarity=0.164 Sum_probs=133.4
Q ss_pred CceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 48 ~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
.++|..++++ +|+.+++++.+.+.... +|+. .+..+++ +.++++++++++ +|++|+|++ +
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~--~Y~~-------~~~~~lr----~~ia~~~~~~~~----~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDKLV--EYPD-------PDYLELR----KRIASFEQLDLE----NVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHhhh--cCCC-------ccHHHHH----HHHHHHhCCChh----hEEECCCHHHH
Confidence 5889888875 58889998887653311 2322 1234555 666666788875 599999999 7
Q ss_pred HHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 023191 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 203 (286)
Q Consensus 125 ~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~ 203 (286)
+..++.++ .+ +.|++++ |.|..+...+...|.+++.++++.+ +++.+| +++.+.+.+ ++++++++ |
T Consensus 84 l~~~~~~~-~~-~~v~i~~--------P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d-~~~~~~~~~-~~~~v~~~~P 150 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILA--------PTFAEYERALKAFDAEIEYAELTEE-TNFAAN-EIVLEEIKE-EIDLVFLCNP 150 (354)
T ss_pred HHHHHHHh-CC-CcEEEec--------CChHHHHHHHHHcCCeeEEEeCccc-cCCCcc-HHHHHhhcc-CCCEEEEeCC
Confidence 77677765 44 6899999 5555544455566766666654311 356889 677666766 79999887 7
Q ss_pred CC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCC---Cc--ceEEEeCCCCCCC--CCCceEEEEe-
Q 023191 204 SA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EY--ADVVTTTTHKSLR--GPRGAMIFFR- 271 (286)
Q Consensus 204 ~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~~--~D~v~~s~~K~l~--gp~gG~l~~~- 271 (286)
+| +|...+ +++|+++|++|++++|+|+++. .....+.....+ .. .-+++.|++|+|+ |.|.|++++.
T Consensus 151 ~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~ 229 (354)
T PRK06358 151 NNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFM-DFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229 (354)
T ss_pred CCCCCCccCHHHHHHHHHHHHhcCCEEEEeCccc-ccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC
Confidence 66 776554 7788889999999999999954 332222111111 11 2377999999874 5566999885
Q ss_pred cchhhhhc
Q 023191 272 KGVKEINK 279 (286)
Q Consensus 272 ~~~~~~~~ 279 (286)
+.+.+..+
T Consensus 230 ~~~~~~~~ 237 (354)
T PRK06358 230 KNLAEKLL 237 (354)
T ss_pred HHHHHHHH
Confidence 45654444
No 220
>PLN02397 aspartate transaminase
Probab=99.72 E-value=9.6e-17 Score=147.88 Aligned_cols=176 Identities=18% Similarity=0.132 Sum_probs=115.6
Q ss_pred cCCcchHHHHHHHHHHHHHHHCCCC-CCCcc--eeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccc
Q 023191 84 YGGNEYIDMAESLCQKRALEAFRLD-PEKWG--VNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 160 (286)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~g~~-~~~~~--~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~ 160 (286)
|+...+..+|++++.+++.+..+.. .+++- .++..++|+..+...+.+++.|||+|++++ |.|+.|...
T Consensus 87 Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~--------P~y~~y~~~ 158 (423)
T PLN02397 87 YLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPN--------PTWGNHHNI 158 (423)
T ss_pred CCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeC--------CCchhHHHH
Confidence 6777889999999999886554322 11100 113334444434445566678999999999 666655556
Q ss_pred cccceeeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEEecccc
Q 023191 161 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 161 ~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~vivD~a~~ 233 (286)
+...|.+++.+++. +.+++.+|++.+++.+.. .++++++++ |+| +|... .+++|+++|++||++||+|+++.
T Consensus 159 ~~~~g~~~~~v~l~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~ 237 (423)
T PLN02397 159 FRDAGVPVRTYRYY-DPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQ 237 (423)
T ss_pred HHHcCCeEEEeecc-cCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccC
Confidence 67788777666642 223578999999888763 256777777 677 77554 46788899999999999999953
Q ss_pred ccccccCC---CCC--CCC--c-ceEEEeCCCCCCC--CCCceEEE
Q 023191 234 SGLVAAGV---IPS--PFE--Y-ADVVTTTTHKSLR--GPRGAMIF 269 (286)
Q Consensus 234 ~g~~~~~~---~~~--~~~--~-~D~v~~s~~K~l~--gp~gG~l~ 269 (286)
+....+. ... .+. + .-+++.|++|+|+ |+|-|+++
T Consensus 238 -~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 238 -GFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred -CccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 3332221 000 010 1 2266899999875 77889985
No 221
>PLN02590 probable tyrosine decarboxylase
Probab=99.72 E-value=2.1e-16 Score=147.94 Aligned_cols=180 Identities=14% Similarity=0.053 Sum_probs=122.2
Q ss_pred CCcchHHHHHHHHHHHHHHHCCCCCCCcc---eeEEeCCChH-HHHHHHHHh----cC-------CCCeEEeccCCCCcc
Q 023191 85 GGNEYIDMAESLCQKRALEAFRLDPEKWG---VNVQSLSGSP-SNFQVYTAL----LK-------PHDRIMALDLPHGGH 149 (286)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~---~~v~~~sG~~-a~~~~l~a~----~~-------~Gd~Vl~~~~~~~~~ 149 (286)
..++...++|+.+.+|+++++|.+...|. ..-++++|++ +++.++.+- .+ |.=.|++.+..|.++
T Consensus 163 ~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv 242 (539)
T PLN02590 163 LTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSF 242 (539)
T ss_pred ccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHH
Confidence 34466789999999999999999753110 1245566666 776554432 11 111233344344443
Q ss_pred cCcccccccccccccee---eeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc--CCCCCCccCHHHHHHHH
Q 023191 150 LSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG--ASAYARLYDYERIRKVC 219 (286)
Q Consensus 150 ~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~--~~n~g~~~~l~~I~~ia 219 (286)
. +.+.+.|. .++.+|.+.+ +++.+|+++|+++|.+. .|-+|+.+ .+++|.+.|+++|+++|
T Consensus 243 ~--------KAa~ilGlg~~~vr~Vp~d~~-~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~ 313 (539)
T PLN02590 243 R--------KACLIGGIHEENIRLLKTDSS-TNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIA 313 (539)
T ss_pred H--------HHHHHcCCCcccEEEEeCCCC-CCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHH
Confidence 2 24556665 3566664321 35799999999999652 24455554 55688999999999999
Q ss_pred HhcCCEEEEeccccccccccCCCC---CCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 220 NKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 220 ~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
++|++|++||+|++.......... .+++.+|.++.++|||+..|.+ |++++|+.
T Consensus 314 ~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~ 371 (539)
T PLN02590 314 KKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDR 371 (539)
T ss_pred HHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCH
Confidence 999999999999765544332221 2345699999999999999999 99999974
No 222
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.72 E-value=7.4e-17 Score=145.50 Aligned_cols=155 Identities=14% Similarity=0.152 Sum_probs=109.5
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
+...+|| +.++++.|.+. +++++|++ |+.+++ .++++||+|+++.+.|++... .+.... -.+
T Consensus 54 p~~~~le----~~lA~leg~~~------~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~-~~~~~~----~~~- 116 (364)
T PRK07269 54 PTRAKLE----ETLAAIESADY------ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFR-WFNQQE----KEG- 116 (364)
T ss_pred ccHHHHH----HHHHHHhCCCe------EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHH-HHHHHH----hcC-
Confidence 4566666 77777777654 55555555 777566 568999999999866654421 110000 000
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
. +. + ++..|++++++++++ +||+|+++ |+| ++...++++|+++|+++|+++++|++++.+... .
T Consensus 117 ~---~~--~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-----~ 182 (364)
T PRK07269 117 R---FH--F---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-----R 182 (364)
T ss_pred c---EE--E---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-----C
Confidence 0 10 1 244689999999987 99999997 666 678889999999999999999999997655321 2
Q ss_pred CCC-cceEEEeCCCCCCCCCC---ceEEEEecc
Q 023191 245 PFE-YADVVTTTTHKSLRGPR---GAMIFFRKG 273 (286)
Q Consensus 245 ~~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~ 273 (286)
++. ++|++++|++|+++|+. ||+++++++
T Consensus 183 pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~ 215 (364)
T PRK07269 183 PIELGADIVLHSATKYLSGHNDVLAGVVVTNDL 215 (364)
T ss_pred chhhCCcEEEecCceeccCCCcccceEEEeCcH
Confidence 333 69999999999998865 588888653
No 223
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=6.2e-17 Score=146.67 Aligned_cols=161 Identities=13% Similarity=0.078 Sum_probs=115.3
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
++..+.|+ +.++.+.+.+. .++++||+.|+.+++.++++|||+|+++++.|+++.... .......|.
T Consensus 63 nPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~----~~~l~~~Gi 129 (395)
T PRK05967 63 TPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFC----DTMLKRLGV 129 (395)
T ss_pred ChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHH----HHHHHhcCe
Confidence 34444455 77777666443 488888887888799999999999999997766553211 112234454
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
++..+ +.+ +.+.+++++++ +||+|+++ |+| ++...|+++|+++|+++|+++++|++++.+.. ..
T Consensus 130 ~v~~v--d~~------~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~-----~~ 195 (395)
T PRK05967 130 EVEYY--DPE------IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY-----FR 195 (395)
T ss_pred EEEEe--CCC------CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee-----cC
Confidence 44433 211 45789999988 89999998 676 56888999999999999999999999765432 23
Q ss_pred CCC-cceEEEeCCCCCCCCCCc---eEEEEecch
Q 023191 245 PFE-YADVVTTTTHKSLRGPRG---AMIFFRKGV 274 (286)
Q Consensus 245 ~~~-~~D~v~~s~~K~l~gp~g---G~l~~~~~~ 274 (286)
+++ |+|+++.|.+|+++|... |++..++++
T Consensus 196 pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~ 229 (395)
T PRK05967 196 PLDFGVDISIHAATKYPSGHSDILLGTVSANEKC 229 (395)
T ss_pred hhHcCCCEEEEecccccCCCCCeeEEEEEcCHHH
Confidence 334 599999999999887543 766666543
No 224
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=1.7e-16 Score=145.81 Aligned_cols=157 Identities=17% Similarity=0.174 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeee
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (286)
...+|+ +.++++.|.+. .+++.+|+.++.+++.+++++||+|+++.+.|++...... ......|..+
T Consensus 59 t~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~----~~l~~~gi~v 125 (425)
T PRK06084 59 TNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLA----HTLPRIGIET 125 (425)
T ss_pred hHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHH----HhcccceeEE
Confidence 344555 77888888653 4777788878887889999999999999977765432111 1112234333
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC
Q 023191 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF 246 (286)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~ 246 (286)
..+ + ..|++++++++++ +|++|+++ ++| +|...++++|.++|+++|++||+|++|+.+... .++
T Consensus 126 ~~~--d------~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-----~p~ 191 (425)
T PRK06084 126 RFA--A------HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-----RPF 191 (425)
T ss_pred EEE--C------CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-----Chh
Confidence 222 2 2389999999987 89999997 767 778889999999999999999999999866432 223
Q ss_pred C-cceEEEeCCCCCCCCCC---ceEEEEec
Q 023191 247 E-YADVVTTTTHKSLRGPR---GAMIFFRK 272 (286)
Q Consensus 247 ~-~~D~v~~s~~K~l~gp~---gG~l~~~~ 272 (286)
. ++|+++.|++|+++|+. ||+++.+.
T Consensus 192 ~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 192 EHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred hcCCCEEEECchhcccccccceeEEEEeCC
Confidence 3 59999999999998875 36555543
No 225
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=1.2e-16 Score=144.64 Aligned_cols=161 Identities=17% Similarity=0.200 Sum_probs=116.1
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
....+|| +.++++.|.+. .+++.+|+.++.++ .+++++||+|+++++.|++.... +.......|.+
T Consensus 52 pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~-~~ll~~Gd~Vl~~~~~y~~t~~~----~~~~~~~~G~~ 117 (366)
T PRK08247 52 PTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLV-MSLFRSGDELIVSSDLYGGTYRL----FEEHWKKWNVR 117 (366)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHH-HHHhCCCCEEEEecCCcCcHHHH----HHHHhhccCce
Confidence 3445555 88888999875 47777777677644 46889999999999777654321 11122335544
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
++.+ +. .|++++++++++ +||+|+++ |+| ++...++++|+++|++||+++|+|++++.+... .+
T Consensus 118 v~~v--d~------~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~-----~p 183 (366)
T PRK08247 118 FVYV--NT------ASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ-----RP 183 (366)
T ss_pred EEEE--CC------CCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc-----Cc
Confidence 4333 22 389999999988 89999997 665 557789999999999999999999997654332 12
Q ss_pred CC-cceEEEeCCCCCCCCC---CceEEEEec-chhh
Q 023191 246 FE-YADVVTTTTHKSLRGP---RGAMIFFRK-GVKE 276 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp---~gG~l~~~~-~~~~ 276 (286)
+. ++|+++.|++|+++|+ .+|++.+++ ++.+
T Consensus 184 ~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~ 219 (366)
T PRK08247 184 LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCE 219 (366)
T ss_pred hhcCCcEEEeecceeccCCCceeeeEEecChHHHHH
Confidence 22 5999999999999887 458888863 4444
No 226
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.71 E-value=2.1e-16 Score=142.80 Aligned_cols=202 Identities=13% Similarity=0.127 Sum_probs=135.5
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|+.++++ +|+.+++++.+.+... .+|+. .. ..+|+ +.++++++++++ +|++|+|++
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~~--~~Y~~------~~-~~~Lr----~aia~~~~v~~~----~I~it~G~~~ 85 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSAL--RHYPD------PD-YRELR----LALAQHHQLPPE----WILPGNGAAE 85 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHHh--hcCCC------cC-HHHHH----HHHHHHhCcChh----hEEECCCHHH
Confidence 46889988884 6888999887765431 12322 12 34555 555556688775 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCC---CCCHHHHHHHhhhcCCcEEE
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG---YIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~---~~d~e~l~~~i~~~~tk~v~ 200 (286)
++..+++++ .+||.|++++ |.|..+...+...|.+++.++++.+ ..+ ..|++++++.. + ++++++
T Consensus 86 ~i~~~~~~l-~~g~~vlv~~--------P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~~ 153 (360)
T PRK07392 86 LLTWAGREL-AQLRAVYLIT--------PAFGDYRRALRAFGATVKELPLPLD-QPSPGLTLRLQTLPPQL-T-PNDGLL 153 (360)
T ss_pred HHHHHHHHh-CCCCeEEEEC--------CCcHHHHHHHHHcCCeEEEEecccc-cCCcccccCHHHHHHhc-c-CCCEEE
Confidence 777677775 4789999999 6666555566677877766664322 122 35677776553 3 688888
Q ss_pred Ec-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC---Cc--ceEEEeCCCCCC--CCCCceEEEEe
Q 023191 201 AG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EY--ADVVTTTTHKSL--RGPRGAMIFFR 271 (286)
Q Consensus 201 i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~~--~D~v~~s~~K~l--~gp~gG~l~~~ 271 (286)
++ |+| +|...+.++|.++|+++++ +|+|+++. .....+.....+ .. .-+++.|++|+| .|.+-|+++++
T Consensus 154 l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~-~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~ 231 (360)
T PRK07392 154 LNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFM-DFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH 231 (360)
T ss_pred EeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchh-hhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC
Confidence 87 777 7888899999999999985 66699954 322211111111 11 237789999987 45666999998
Q ss_pred cchhhhhc
Q 023191 272 KGVKEINK 279 (286)
Q Consensus 272 ~~~~~~~~ 279 (286)
.++.+..+
T Consensus 232 ~~~~~~~~ 239 (360)
T PRK07392 232 PDRLQRWQ 239 (360)
T ss_pred HHHHHHHH
Confidence 87665544
No 227
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.71 E-value=1.6e-16 Score=145.92 Aligned_cols=195 Identities=21% Similarity=0.235 Sum_probs=129.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhc--C
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL--K 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~--~ 134 (286)
.+|.+++++.+.+.. +..+..+.+. ++......+|+ +.+++++|.+. .|++++|++++..++.++. .
T Consensus 61 ~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~~~~i~~l~~~~ 130 (410)
T PRK13392 61 QHPDVIGAMVDALDR-YGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSNDAALSTLGKLL 130 (410)
T ss_pred CCHHHHHHHHHHHHH-cCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHHhcCC
Confidence 589999999887754 3222222222 22222334444 88888888642 5999999887776777664 4
Q ss_pred CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh---hcCCcEEEEc-CCC-CCCc
Q 023191 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLIVAG-ASA-YARL 209 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~---~~~tk~v~i~-~~n-~g~~ 209 (286)
+||.|+.....|.++.. .+...|.++..++ .+ |++++++.+. ..+|++|+++ ++| +|..
T Consensus 131 ~g~~vi~~~~~h~s~~~--------~~~~~g~~~~~~~--~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~ 194 (410)
T PRK13392 131 PGCVILSDALNHASMIE--------GIRRSGAEKQVFR--HN------DLADLEEQLASVDPDRPKLIAFESVYSMDGDI 194 (410)
T ss_pred CCCEEEEehhhhHHHHH--------HHHHcCCeEEEEe--CC------CHHHHHHHHHhccCCCCEEEEEeCCCCCCccc
Confidence 89988887666655432 2234454443332 11 4555655554 2378899997 555 7788
Q ss_pred cCHHHHHHHHHhcCCEEEEecccccccccc---CCCC-CC-CCcceEEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 210 YDYERIRKVCNKQKAIMLADMAHISGLVAA---GVIP-SP-FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~~-~~-~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
.|+++|.++|++|++++|+|++|+.|.... +... .. .+..|+++.|++|+|+++ ||++.+++++.+..+
T Consensus 195 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-GG~~~~~~~~~~~l~ 268 (410)
T PRK13392 195 APIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-GGYIAASADLIDFVR 268 (410)
T ss_pred ccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-cchhhcCHHHHHHHH
Confidence 999999999999999999999999776531 1110 11 124689999999999764 588888887776555
No 228
>PRK07908 hypothetical protein; Provisional
Probab=99.70 E-value=4.3e-16 Score=140.11 Aligned_cols=196 Identities=15% Similarity=0.120 Sum_probs=131.3
Q ss_pred HcCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|+.++|+ +|+.+++++.+.+.+.. +| +...+..+++ +.+++++|++++ +|++|+|++
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~Y------~~~~g~~~lr----~aia~~~~~~~~----~I~it~Ga~ 85 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDLA--AY------PSTEDERRAR----AAVAARHGRTPD----EVLLLAGAA 85 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHhh--cC------CCccchHHHH----HHHHHHhCcChh----hEEECCCHH
Confidence 367899989884 68889999988764311 23 3334555566 556666788775 599999999
Q ss_pred -HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 -a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
++..+++ +++| .+++.. |.|..+...+...|.+++.++ ++ +++.+|++.+ .+ ++++++++
T Consensus 86 ~al~~~~~--l~~~-~viv~~--------P~y~~~~~~~~~~G~~i~~v~--~~-~~~~~d~~~l----~~-~~~~i~l~ 146 (349)
T PRK07908 86 EGFALLAR--LRPR-RAAVVH--------PSFTEPEAALRAAGIPVHRVV--LD-PPFRLDPAAV----PD-DADLVVIG 146 (349)
T ss_pred HHHHHHHh--cCCC-eEEEeC--------CCChHHHHHHHHcCCEEEeec--cC-cccCcChhHh----cc-CCCEEEEc
Confidence 7765555 6775 455666 444444434556776665555 44 3478888754 34 78999997
Q ss_pred -CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC--CCc-ceEEEeCCCCCC--CCCCceEEEEecchh
Q 023191 203 -ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP--FEY-ADVVTTTTHKSL--RGPRGAMIFFRKGVK 275 (286)
Q Consensus 203 -~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~--~~~-~D~v~~s~~K~l--~gp~gG~l~~~~~~~ 275 (286)
++| +|...+.++|.++|++ +.++|+|+++.. ..... .... ... ..+++.|++|+| .|.+.|+++.+.++.
T Consensus 147 np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~-~~~~~-~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~ 223 (349)
T PRK07908 147 NPTNPTSVLHPAEQLLALRRP-GRILVVDEAFAD-AVPGE-PESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVL 223 (349)
T ss_pred CCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchh-hccCC-ccccccccCCCEEEEeecccccCCccceeeeeecCHHHH
Confidence 777 8889999999999975 778999999753 12111 1110 111 235677999976 466779999988776
Q ss_pred hhhc
Q 023191 276 EINK 279 (286)
Q Consensus 276 ~~~~ 279 (286)
+..+
T Consensus 224 ~~~~ 227 (349)
T PRK07908 224 ARLT 227 (349)
T ss_pred HHHH
Confidence 5554
No 229
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=2e-16 Score=141.47 Aligned_cols=198 Identities=15% Similarity=0.079 Sum_probs=134.9
Q ss_pred cCceecCCCCC--CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-
Q 023191 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~- 123 (286)
+.++|..++++ +|+.+++++.+.+.......|+ . .+..+|++++.+++.+.+ ++++ +|++|+|++
T Consensus 20 ~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~------~-~~~~~Lr~aia~~~~~~~-~~~~----~i~it~Ga~~ 87 (335)
T PRK14808 20 DRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYY------D-SPDEELIEKILSYLDTDF-LSKN----NVSVGNGADE 87 (335)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCC------C-CChHHHHHHHHHHhCCCC-CCcc----eEEEcCCHHH
Confidence 56899999884 6889999988766431111122 2 245677766666655432 6664 599999999
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
++.+++.++ |.|++++ |.|+.|...+...|.+++.+| .+ +++.++... + . ++++++++
T Consensus 88 ~i~~~~~~~----d~v~v~~--------P~y~~~~~~~~~~g~~~~~v~--~~-~~~~~~~~~----~-~-~~~~i~i~n 146 (335)
T PRK14808 88 IIYVMMLMF----DRSVFFP--------PTYSCYRIFAKAVGAKFLEVP--LT-KDLRIPEVN----V-G-EGDVVFIPN 146 (335)
T ss_pred HHHHHHHHh----CcEEECC--------CCHHHHHHHHHHcCCeEEEec--CC-CcCCCChhH----c-c-CCCEEEEeC
Confidence 887677776 6799999 666666667778887776665 44 345555332 2 2 57888887
Q ss_pred CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCc--ceEEEeCCCCCCC--CCCceEEEEecchhhh
Q 023191 203 ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEY--ADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (286)
Q Consensus 203 ~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~--~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (286)
|+| +|...+.+++.+++ +++++||+|+++.. ...... ...+.. .-+++.|++|+|+ |.|-|++++++++.+.
T Consensus 147 P~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~-f~~~~~-~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~ 223 (335)
T PRK14808 147 PNNPTGHVFEREEIERIL-KTGAFVALDEAYYE-FHGESY-VDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDA 223 (335)
T ss_pred CCCCCCCCcCHHHHHHHH-hcCCEEEEECchhh-hcCCch-HHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHH
Confidence 777 78889999999998 57999999999642 211110 010111 2377899999886 5566999999888776
Q ss_pred hcc
Q 023191 278 NKQ 280 (286)
Q Consensus 278 ~~~ 280 (286)
.++
T Consensus 224 l~~ 226 (335)
T PRK14808 224 YNR 226 (335)
T ss_pred HHH
Confidence 654
No 230
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.70 E-value=7.1e-16 Score=139.34 Aligned_cols=178 Identities=20% Similarity=0.169 Sum_probs=118.5
Q ss_pred CCcchHHHHHHHHHHHHHHHCCCCCCCcc---eeEEeCCChH-HHHHHHHHhc--------CC-----CC-eEEeccCCC
Q 023191 85 GGNEYIDMAESLCQKRALEAFRLDPEKWG---VNVQSLSGSP-SNFQVYTALL--------KP-----HD-RIMALDLPH 146 (286)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~---~~v~~~sG~~-a~~~~l~a~~--------~~-----Gd-~Vl~~~~~~ 146 (286)
..++...++|+++.+|+++++|.+.+... ..-++|+|++ +++.++.+.- .. +. .|++.+..|
T Consensus 72 ~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH 151 (373)
T PF00282_consen 72 EASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAH 151 (373)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-
T ss_pred ccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccc
Confidence 33467889999999999999999832100 2356667777 7765543331 11 23 344444445
Q ss_pred CcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--C---CcEEEEc--CCCCCCccCHHHHHHHH
Q 023191 147 GGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--R---PKLIVAG--ASAYARLYDYERIRKVC 219 (286)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~---tk~v~i~--~~n~g~~~~l~~I~~ia 219 (286)
.+.. +.+.+.|..++.+| ++ +++.+|+++|++++.+. + |-+|+.+ .+++|...|+++|+++|
T Consensus 152 ~S~~--------Kaa~~lGlg~~~I~--~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~ 220 (373)
T PF00282_consen 152 YSIE--------KAARILGLGVRKIP--TD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADIC 220 (373)
T ss_dssp THHH--------HHHHHTTSEEEEE---BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHH
T ss_pred cHHH--------HhcceeeeEEEEec--CC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhc
Confidence 4443 25667887776676 55 57899999999988642 2 2234444 55588999999999999
Q ss_pred HhcCCEEEEeccccccccccCCC---CCCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 220 NKQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 220 ~~~~~~vivD~a~~~g~~~~~~~---~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
+++++|++||+|++......... ...++.+|.++.++|||++.|.+ |++++|++
T Consensus 221 ~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~ 278 (373)
T PF00282_consen 221 EKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDK 278 (373)
T ss_dssp HHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSG
T ss_pred cccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecc
Confidence 99999999999966534332222 22344699999999999999999 99999985
No 231
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.69 E-value=5e-16 Score=142.55 Aligned_cols=205 Identities=20% Similarity=0.202 Sum_probs=133.0
Q ss_pred CceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 48 ~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+++..++- ..+|.+++++.+.+.. +..+..+.+. ++..+...+++ +.+++++|.+. .+++++|+.
T Consensus 48 ~~~~~s~dylgl~~~p~v~~a~~~~~~~-~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~~ 117 (407)
T PRK09064 48 VTVWCSNDYLGMGQHPKVIEAMIEALDR-CGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGYV 117 (407)
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHH-cCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHHH
Confidence 466654433 2588999999887765 3222222222 22333344444 77778888532 588899988
Q ss_pred HHHHHHHHhcC--CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcE
Q 023191 124 SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKL 198 (286)
Q Consensus 124 a~~~~l~a~~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~---~~tk~ 198 (286)
++..++..+.. +++.|+.....|.+... ++...+.....+ + ..|++++++.++. .++++
T Consensus 118 an~~ai~~l~~~~~~~~i~~~~~~h~s~~~--------~~~~~~~~~~~~--~------~~d~~~le~~l~~~~~~~~~~ 181 (407)
T PRK09064 118 SNDATLSTLAKLIPDCVIFSDELNHASMIE--------GIRRSRCEKHIF--R------HNDVAHLEELLAAADPDRPKL 181 (407)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCcchHHHHH--------HHHHcCCcEEEE--C------CCCHHHHHHHHHhccCCCCeE
Confidence 87767776654 77766666555554432 222333333222 2 1378888887762 26788
Q ss_pred EEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEecccccccccc---CC-CCCCC-CcceEEEeCCCCCCCCCCceEEEEe
Q 023191 199 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GV-IPSPF-EYADVVTTTTHKSLRGPRGAMIFFR 271 (286)
Q Consensus 199 v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~-~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~ 271 (286)
|+++ +.| .|...|+++|.++|++||+++|+|++|+.|.+.. +. ...++ ...|+++.+++|.|+ ..||+++++
T Consensus 182 v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~GG~~~~~ 260 (407)
T PRK09064 182 IAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFG-VMGGYIAGS 260 (407)
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhh-ccCceEecC
Confidence 9887 444 6788899999999999999999999998765421 11 00111 236899999999885 457999998
Q ss_pred cchhhhhc
Q 023191 272 KGVKEINK 279 (286)
Q Consensus 272 ~~~~~~~~ 279 (286)
+++.+.++
T Consensus 261 ~~~~~~l~ 268 (407)
T PRK09064 261 AALVDAVR 268 (407)
T ss_pred HHHHHHHH
Confidence 88776654
No 232
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.69 E-value=9.3e-17 Score=144.75 Aligned_cols=199 Identities=14% Similarity=0.109 Sum_probs=128.6
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCc---chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC-hH-
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGN---EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SP- 123 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG-~~- 123 (286)
++|++|....|+.|++++.+++.+ +. +++...+..+ ....++-+.+|+.+++++|++.+. +|++++| +|
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~---~vvf~~gs~T~ 74 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY---KVLFLQGGATG 74 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCchH
Confidence 468888888999999999998854 21 2222122222 233466677899999999984332 5888877 66
Q ss_pred HHHHHHHHhcC---CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCC-CCC-HHHHHHHhhhcCCcE
Q 023191 124 SNFQVYTALLK---PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG-YID-YDQLEKSATLFRPKL 198 (286)
Q Consensus 124 a~~~~l~a~~~---~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~d-~e~l~~~i~~~~tk~ 198 (286)
++.+++.+++. +||.|++- ++.......++..|.+++.++. + +++ ..+ .+..+..+++ ++++
T Consensus 75 a~~~~~~~l~~~~~~~~~i~~g---------~~~~~~~~~a~~~g~~~~~~~~--~-~~g~~~~~~~~~~~~~~~-~~~l 141 (355)
T cd00611 75 QFAAVPLNLLGDKGTADYVVTG---------AWSAKAAKEAKRYGGVVVIVAA--K-EEGKYTKIPDVETWDLAP-DAAY 141 (355)
T ss_pred HHHHHHHhcCCCCCeEEEEECC---------HHHHHHHHHHHhcCCCcEEEec--c-cccCCCCCCCHhhcCCCC-CCCE
Confidence 77778888877 55555442 2211000112334555666653 2 221 113 2222233555 8999
Q ss_pred EEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 199 IVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 199 v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
|.++ .+| +|... . ++++.||+++++|++|++|..+.++... |++++|+||+| ||.| |++++++++.
T Consensus 142 V~~~h~~t~tG~~~--~---~i~~~~g~~~~VDa~qs~g~~~idv~~~-----~~~~ss~~K~l-GP~G~g~l~~~~~~~ 210 (355)
T cd00611 142 VHYCSNETIHGVEF--D---EVPDTGGVPLVADMSSNILSRPIDVSKF-----GVIYAGAQKNL-GPAGVTVVIVRKDLL 210 (355)
T ss_pred EEEeCCcccccEEc--c---eecccCCCeEEEEccccccCCCCCHHHh-----CEEEeeccccc-CCCceEEEEECHHHH
Confidence 9886 555 66542 2 4556699999999999999998777553 35667799976 7999 9999999766
Q ss_pred hh
Q 023191 276 EI 277 (286)
Q Consensus 276 ~~ 277 (286)
+.
T Consensus 211 ~~ 212 (355)
T cd00611 211 GK 212 (355)
T ss_pred hh
Confidence 44
No 233
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=2.8e-16 Score=142.17 Aligned_cols=170 Identities=14% Similarity=0.060 Sum_probs=118.6
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCC-CeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
+++.+++++|++++ +|++|+|++ ++..++.+++++| |.|++++ |.|..+...+...|.+++.+++.
T Consensus 64 lr~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~--------p~y~~~~~~~~~~g~~~~~v~~~ 131 (364)
T PRK04781 64 LRSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTP--------PVFGMYAVCARLQNAPLVEVPLV 131 (364)
T ss_pred HHHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcC--------CChHHHHHHHHHcCCEEEEEecC
Confidence 44667777788774 599999999 7777889999999 7999998 55544444445667767666643
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHh--cCCEEEEeccccccccccCCCCCC-CCc-
Q 023191 175 LNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSP-FEY- 248 (286)
Q Consensus 175 ~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~-~~~- 248 (286)
.+.+++.+|++++.+.+...++++|+++ |+| +|...+.+++.++++. ++++||+|+++.. ..... .... ...
T Consensus 132 ~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~-f~~~~-~~~~~~~~~ 209 (364)
T PRK04781 132 DGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGE-FSDVP-SAVGLLARY 209 (364)
T ss_pred CCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchh-hcCCc-chHHHHhhC
Confidence 2223467899998765533389999997 666 7788888888777764 4789999999642 22110 0000 011
Q ss_pred -ceEEEeCCCCCCC--CCCceEEEEecchhhhhcc
Q 023191 249 -ADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 249 -~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~ 280 (286)
.-+++.|++|.|+ |.|-|++++++++.+..++
T Consensus 210 ~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~ 244 (364)
T PRK04781 210 DNLAVLRTLSKAHALAAARIGSLIANAELIAVLRR 244 (364)
T ss_pred CCEEEEecChhhcccccceeeeeeCCHHHHHHHHh
Confidence 2377999999874 6677999999887766553
No 234
>PRK08354 putative aminotransferase; Provisional
Probab=99.68 E-value=1e-15 Score=135.60 Aligned_cols=179 Identities=14% Similarity=0.125 Sum_probs=120.6
Q ss_pred cCceecCCCCC-CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-H
Q 023191 47 KGLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (286)
Q Consensus 47 ~~i~L~~~e~~-~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a 124 (286)
+.++|+.++|+ +|+.+.+++.+++.. . .+|+. ... +++++++++|. +|++|+|++ +
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~-~-~~yp~---------~~~----l~~~ia~~~~~-------~I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI-S-GRYTY---------YEW----LEEEFSKLFGE-------PIVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH-h-hcCCC---------hHH----HHHHHHHHHCC-------CEEECCCHHHH
Confidence 46889989885 477888888776543 1 12331 223 44777777772 399999999 7
Q ss_pred HHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 023191 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-A 203 (286)
Q Consensus 125 ~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~ 203 (286)
+..++ .++.+||+|++++ |.|+.+...+...|.++ ++ ..+|++.+++.+. ++++++++ |
T Consensus 67 l~~~~-~~~~~gd~vlv~~--------P~y~~~~~~~~~~g~~~--~~-------~~~d~~~l~~~~~--~~~~vi~~~P 126 (311)
T PRK08354 67 LYLIG-ILALRDRKVIIPR--------HTYGEYERVARFFAARI--IK-------GPNDPEKLEELVE--RNSVVFFCNP 126 (311)
T ss_pred HHHHH-HhhCCCCeEEEeC--------CCcHHHHHHHHHcCCEE--ee-------cCCCHHHHHHhhc--CCCEEEEecC
Confidence 66455 4455999999999 55555554556677544 22 1357889988775 46777776 7
Q ss_pred CC-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCC--CCCCceEEEE
Q 023191 204 SA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL--RGPRGAMIFF 270 (286)
Q Consensus 204 ~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l--~gp~gG~l~~ 270 (286)
+| +|...+ +++|+++|+++|+++|+|+++. .....+... . ...-+++.|++|+| .|.+-|++++
T Consensus 127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~-~f~~~~~~~-~-~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAFI-DFVKKPESP-E-GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcch-hcccccccc-C-CCcEEEEeccHhhcCCccceeeeeee
Confidence 66 775554 6677888899999999999963 332222111 1 12447789999987 4556699887
No 235
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.68 E-value=4.5e-16 Score=154.06 Aligned_cols=175 Identities=16% Similarity=0.113 Sum_probs=124.5
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh----cCCCC----eEEeccCCCCcccCccccccc
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL----LKPHD----RIMALDLPHGGHLSHGYQTDT 158 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~----~~~Gd----~Vl~~~~~~~~~~~~~~~~~~ 158 (286)
+++..++..++.+++++++|.+. ..++..+|+.+.++.+.++ .++|| +|++++..|+++...
T Consensus 537 ~qG~l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s------ 606 (954)
T PRK05367 537 AAGYRELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS------ 606 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH------
Confidence 35677888889999999999875 2344333433554433333 35666 599999999887542
Q ss_pred cccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCCCCC-ccCHHHHHHHHHhcCCEEEEeccccc
Q 023191 159 KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASAYAR-LYDYERIRKVCNKQKAIMLADMAHIS 234 (286)
Q Consensus 159 ~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n~g~-~~~l~~I~~ia~~~~~~vivD~a~~~ 234 (286)
+.+.|.+++.++ .+ .++.+|+++|+++++++ ++.+|+++ ++..|. ..|+++|+++||++|+++++|+||..
T Consensus 607 --a~~~G~~vv~v~--~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~ 681 (954)
T PRK05367 607 --AVMAGMKVVVVA--CD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMN 681 (954)
T ss_pred --HHHCCCEEEEEC--CC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChh
Confidence 345676676665 44 45899999999999763 45667676 444664 47899999999999999999999987
Q ss_pred cccccCCCCCCCCcceEEEeCCCCCCCCCCc------eEEEEecchhhhh
Q 023191 235 GLVAAGVIPSPFEYADVVTTTTHKSLRGPRG------AMIFFRKGVKEIN 278 (286)
Q Consensus 235 g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g------G~l~~~~~~~~~~ 278 (286)
+.+.... ..--|+|++++++||||++|.| |++++++.+...+
T Consensus 682 al~~l~~--pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~l 729 (954)
T PRK05367 682 AQVGLAR--PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFL 729 (954)
T ss_pred hccCCCC--hhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccC
Confidence 6654331 1112699999999999865554 5899987665443
No 236
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.67 E-value=4.7e-16 Score=140.22 Aligned_cols=207 Identities=11% Similarity=0.091 Sum_probs=136.6
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH--HH
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--SN 125 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~--a~ 125 (286)
.+.|++|...+|+.|++++...+.+..+.+..............++-+.+++.+++++|.+.+. .|++++|+. ++
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~---~v~~~~gsgt~~~ 80 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNY---KVLFLQGGASLQF 80 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc---EEEEEcCCchHHH
Confidence 3567888888999999999887643111110000000112234477778899999999983322 466655554 88
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHH-HhhhcCCcEEEEc--
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK-SATLFRPKLIVAG-- 202 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~-~i~~~~tk~v~i~-- 202 (286)
.+++..++.+||++++.....-++ .+ ...++..|.. ..+. .+...+..+..++++ .+++ ++++|.++
T Consensus 81 Ea~~~nl~~~g~~~l~i~~G~fg~---r~---~~~a~~~g~~-~~~~--~~~~~g~~~~~~~~~~~l~~-~~~~V~~th~ 150 (360)
T PRK05355 81 AMVPMNLLGGGKKADYVDTGSWSK---KA---IKEAKKYGEV-NVAA--SSEDDGFTYIPPLDEWQLSD-DAAYVHYTSN 150 (360)
T ss_pred HHHHHhcCCCCCeEEEEECCHHHH---HH---HHHHHHhCCc-eEEe--cccccCCCCCCChhhccCCC-CCCEEEEccC
Confidence 889999999999999876211111 11 1123444532 3333 221134445445555 6666 89999886
Q ss_pred CCCCCCcc-CHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 203 ASAYARLY-DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 203 ~~n~g~~~-~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
.+++|... |+++| +|+++++|++|++|..+.++.. .|++++|+||+| ||.| |++++++++.+..+
T Consensus 151 eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~-----~d~~~~ssqK~l-gP~Glg~l~~s~~~l~~~~ 217 (360)
T PRK05355 151 ETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSK-----FGLIYAGAQKNI-GPAGLTIVIVREDLLGRAL 217 (360)
T ss_pred CCcceEecCccccc------CCCcEEEEcCccccCccCCHHH-----ccEEEEeccccc-cCCceEEEEECHHHHhhcc
Confidence 44478776 67666 8999999999999998877653 469999999988 5999 99999998765543
No 237
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.67 E-value=8.1e-16 Score=149.52 Aligned_cols=165 Identities=17% Similarity=0.135 Sum_probs=120.6
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhc--------CCCCeEEeccCCCCcccCccccccc
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL--------KPHDRIMALDLPHGGHLSHGYQTDT 158 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~ 158 (286)
+++..++-.++.+++++++|.+. +.+...+|+.+.++.++++- ...++|+++...|+++..+
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas------ 607 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS------ 607 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH------
Confidence 45555666667799999999987 45777788877766666652 2346788999999888432
Q ss_pred cccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCCCC-CccCHHHHHHHHHhcCCEEEEeccccc
Q 023191 159 KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAHIS 234 (286)
Q Consensus 159 ~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n~g-~~~~l~~I~~ia~~~~~~vivD~a~~~ 234 (286)
+...|.+++.++ .+ +++.+|+++|+++++++ ++++|.++ +++.| ...++++|+++||++|++|++|++|..
T Consensus 608 --a~~~GieVv~Vp--~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~ 682 (954)
T PRK12566 608 --AQMAGMRVVIVE--CD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLN 682 (954)
T ss_pred --HHHCCCEEEEec--cC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChh
Confidence 234566666565 55 56899999999999732 55666666 44455 446699999999999999999999987
Q ss_pred cccccCC-CCCCCCcceEEEeCCCCCCCCCCc-eEEE
Q 023191 235 GLVAAGV-IPSPFEYADVVTTTTHKSLRGPRG-AMIF 269 (286)
Q Consensus 235 g~~~~~~-~~~~~~~~D~v~~s~~K~l~gp~g-G~l~ 269 (286)
+...... ... |+|++++++||||++|.| |..+
T Consensus 683 a~~~l~~Pg~~---GADi~~~s~HKtf~~P~G~GGP~ 716 (954)
T PRK12566 683 AQVGLARPADI---GADVSHMNLHKTFCIPHGGGGPG 716 (954)
T ss_pred hccCCCChhhc---CCCEEEecCCcccCcCccCCCCc
Confidence 6654332 122 599999999999987766 5443
No 238
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.67 E-value=1.5e-15 Score=139.19 Aligned_cols=195 Identities=22% Similarity=0.215 Sum_probs=130.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~-- 134 (286)
.+|++++++.+.+.. |..+..+.+. ++..+...+ +.+.+++++|.+. .+++++|+.++..++..+..
T Consensus 60 ~~p~v~~a~~~~~~~-~~~~~~~s~~~~g~~~~~~~----Le~~la~~~g~~~-----~l~~~sG~~an~~ai~~l~~~~ 129 (402)
T TIGR01821 60 QHPEVLQAMHETLDK-YGAGAGGTRNISGTNIPHVE----LEAELADLHGKES-----ALVFTSGYVANDATLATLAKII 129 (402)
T ss_pred CCHHHHHHHHHHHHH-cCCCCcchhhhhCCcHHHHH----HHHHHHHHhCCCe-----EEEECchHHHHHHHHHHhhCCC
Confidence 488999999988865 4333322222 222333344 4488888888643 58899998888878777754
Q ss_pred CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc-CCC-CCCc
Q 023191 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG-ASA-YARL 209 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~-~~n-~g~~ 209 (286)
+|+.|+.....|.+.... +...|.....+ + ..|++++++.++. .++++|+++ +.| +|..
T Consensus 130 ~~~~v~~~~~~h~s~~~~--------~~~~g~~~~~~--~------~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~ 193 (402)
T TIGR01821 130 PGCVIFSDELNHASMIEG--------IRHSGAEKFIF--R------HNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDI 193 (402)
T ss_pred CCCEEEEcchHhHHHHHH--------HHHcCCeEEEE--C------CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCc
Confidence 778777766566554332 22334333222 1 2377888887763 257888887 444 7788
Q ss_pred cCHHHHHHHHHhcCCEEEEecccccccccc---CCC-CCCC-CcceEEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 210 YDYERIRKVCNKQKAIMLADMAHISGLVAA---GVI-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~-~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
.|+++|.++|++||+++|+|++|+.|.... +.. ..++ ...|+++.+++|.|++ .||++++++++.+..+
T Consensus 194 ~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~GG~i~~~~~~~~~l~ 267 (402)
T TIGR01821 194 APIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGV-VGGYIAASRKLIDAIR 267 (402)
T ss_pred cCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhcc-CCceeecCHHHHHHHH
Confidence 999999999999999999999999775421 111 1111 1368999999999865 5688888888776655
No 239
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.67 E-value=1.9e-15 Score=137.05 Aligned_cols=161 Identities=19% Similarity=0.116 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEE
Q 023191 92 MAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (286)
Q Consensus 92 ~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (286)
++-+.+++.+++++|.+. .+++++|+.++..++..+.++||.|++...+|.+...+... ..+. .+
T Consensus 56 ~~~~~~e~~la~~~~~~~-----~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-------~~~~---~~ 120 (370)
T PRK05937 56 SLLDDLEHKIAHFHGAPE-----AFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-------ISGW---HQ 120 (370)
T ss_pred HHHHHHHHHHHHHhCCCe-----EEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-------cCCc---eE
Confidence 444455688999999854 48999999988766666678899999888888887654321 1111 12
Q ss_pred ecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC--
Q 023191 172 PYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-- 242 (286)
Q Consensus 172 ~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-- 242 (286)
.++ ..|++++++++++. ++++|+++ .+| +|.+.|+++|.++|+++|+++++|++|+.|.+..+..
T Consensus 121 ~~~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~ 194 (370)
T PRK05937 121 SFR------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGF 194 (370)
T ss_pred Eec------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCch
Confidence 222 35899999988731 34566666 444 7899999999999999999999999999887764431
Q ss_pred --CCCCCcceEEEeCCCCCCCCCCceEEEEecch
Q 023191 243 --PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGV 274 (286)
Q Consensus 243 --~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~ 274 (286)
.+.+...++++.|++|.+ ||.|+.+++.++.
T Consensus 195 ~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~~~~ 227 (370)
T PRK05937 195 CHSLGYENFYAVLVTYSKAL-GSMGAALLSSSEV 227 (370)
T ss_pred HHhhCCCCCcEEEEechhhh-hcCceEEEcCHHH
Confidence 122222346778999976 6677445555543
No 240
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.67 E-value=1.4e-16 Score=138.78 Aligned_cols=193 Identities=18% Similarity=0.203 Sum_probs=130.6
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD 137 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd 137 (286)
+.++++++|.+.... . ..|+......+++ +.++++||.+. .+++.+|+.++..++++++.|++
T Consensus 7 ~~~~m~~a~~~a~~g-----d---~~Yg~D~~~~~l~----~~i~~l~g~e~-----a~f~~sGT~An~~al~~~~~~~~ 69 (290)
T PF01212_consen 7 PTPAMLEAMAAANVG-----D---DAYGEDPTTARLE----ERIAELFGKEA-----ALFVPSGTMANQLALRAHLRPGE 69 (290)
T ss_dssp S-HHEEHHHHHTTSB---------CCTTSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHccccC-----C---cccCCChhHHHHH----HHHHHHcCCCE-----EEEeCCCChHHHHHHHHHHhcCC
Confidence 778888888554322 1 1256666777777 77888889875 36666666699999999999999
Q ss_pred eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh-----cCCcEEEEc-CCCC--CCc
Q 023191 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVAG-ASAY--ARL 209 (286)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-----~~tk~v~i~-~~n~--g~~ 209 (286)
.|+..+..|..+...+. ...+.|.++..+ +.+ +++.+|+++|++.+.. .+|++|+++ ++|. |.+
T Consensus 70 ~vi~~~~aHi~~~E~ga-----~~~~~G~~~~~l--~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~ 141 (290)
T PF01212_consen 70 SVICADTAHIHFDETGA-----IEELSGAKLIPL--PSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTV 141 (290)
T ss_dssp EEEEETTEHHHHSSTTH-----HHHHTTCEEEEE--BEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB-
T ss_pred ceeccccceeeeeccch-----hhHhcCcEEEEC--CCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCee
Confidence 99998854433322221 124566555444 333 3389999999999976 357899997 6666 655
Q ss_pred c---CHHHHHHHHHhcCCEEEEeccccccccc-cCCCCC-CCCcceEEEeCCCCCCCCCCceEEEEecchh
Q 023191 210 Y---DYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPS-PFEYADVVTTTTHKSLRGPRGAMIFFRKGVK 275 (286)
Q Consensus 210 ~---~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~-~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~ 275 (286)
. ++++|.++|++||+.|+.|+|..+.... .+.... -..++|++.+|++|.++.|.|++|++++++.
T Consensus 142 ~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i 212 (290)
T PF01212_consen 142 YSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFI 212 (290)
T ss_dssp --HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHH
T ss_pred CCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechHHH
Confidence 5 5778889999999999999996533221 011000 0135999999999999999999999999853
No 241
>PRK15029 arginine decarboxylase; Provisional
Probab=99.67 E-value=8.3e-16 Score=148.01 Aligned_cols=164 Identities=18% Similarity=0.108 Sum_probs=125.5
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
+..+..++.||++. ..++++|+| ++.+++++++++||+|++....|.|.+. ++.+.|..++.++-.
T Consensus 209 eAq~~aA~~fgA~~-----t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~--------al~L~ga~Pvyl~P~ 275 (755)
T PRK15029 209 ESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLILTGAKPVYMVPS 275 (755)
T ss_pred HHHHHHHHHhCCCc-----EEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeEEEeccc
Confidence 35588999999986 488899999 9999999999999999999999998876 445677666555322
Q ss_pred cCCCC---CCCC-----HHHHHHHhhhc-CCc--------EEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccc
Q 023191 175 LNEST---GYID-----YDQLEKSATLF-RPK--------LIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGL 236 (286)
Q Consensus 175 ~~~~~---~~~d-----~e~l~~~i~~~-~tk--------~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (286)
.+ +. +.++ ++.+++++.++ .+| +++++.++ .|.+.++++|+++|++++++|++|+||++..
T Consensus 276 ~~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 276 RN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred cc-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 22 11 2334 89999988652 234 88887566 7899999999999999999999999998765
Q ss_pred cccCCCC--CCC-------Ccce-EEEeCCCCCCCCCCc-eEEEEecc
Q 023191 237 VAAGVIP--SPF-------EYAD-VVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 237 ~~~~~~~--~~~-------~~~D-~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
......+ ..+ .|+| +++-|+||++++... ++|-++.+
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 4333222 223 3688 999999999988755 88888665
No 242
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.66 E-value=8.8e-16 Score=137.09 Aligned_cols=191 Identities=18% Similarity=0.157 Sum_probs=121.9
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
+.++|..++++.++.+.+...+.+ . . |+...+ .+++ +++++++|++++ +|++|+|++ ++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~-~----~------y~~~~~-~~lr----~~la~~~~~~~~----~i~~t~G~~~~i 77 (330)
T TIGR01140 18 DWLDFSTGINPLGPPVPPIPASAW-A----R------YPDPEY-DELR----AAAAAYYGLPAA----SVLPVNGAQEAI 77 (330)
T ss_pred heeEccccCCCCCCChhhcchHHH-h----h------CCCccH-HHHH----HHHHHHhCCChh----hEEECCCHHHHH
Confidence 458888888764433333222211 1 1 222232 4555 777777888764 599999999 66
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~ 204 (286)
.++ ..++.+| .|++.+|.|..+. ......|.+++.++ |++++++.+. ++++++++ |+
T Consensus 78 ~~~-~~~l~~g-~vl~~~p~y~~~~--------~~~~~~g~~~~~~~----------d~~~l~~~~~--~~~~v~i~~p~ 135 (330)
T TIGR01140 78 YLL-PRLLAPG-RVLVLAPTYSEYA--------RAWRAAGHEVVELP----------DLDRLPAALE--ELDVLVLCNPN 135 (330)
T ss_pred HHH-HHHhCCC-eEEEeCCCcHHHH--------HHHHHcCCEEEEeC----------CHHHHHhhcc--cCCEEEEeCCC
Confidence 644 4457888 6898886555443 23345554443332 7899999883 57888776 77
Q ss_pred C-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC-CCCcceEEEeCCCCCCCCC--CceEEEEecchhhh
Q 023191 205 A-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (286)
Q Consensus 205 n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~~~D~v~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (286)
| +|...+ +++|+++|+++|+++|+|+++............ .....++++.|++|+|+.| +.|++++++++.+.
T Consensus 136 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~ 215 (330)
T TIGR01140 136 NPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLAR 215 (330)
T ss_pred CCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHH
Confidence 7 777777 667788899999999999997532211111100 0012568899999988644 23999998887665
Q ss_pred hc
Q 023191 278 NK 279 (286)
Q Consensus 278 ~~ 279 (286)
.+
T Consensus 216 l~ 217 (330)
T TIGR01140 216 LR 217 (330)
T ss_pred HH
Confidence 55
No 243
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.65 E-value=4.6e-15 Score=136.07 Aligned_cols=197 Identities=18% Similarity=0.213 Sum_probs=139.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCC-cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~--- 133 (286)
..|.++++..+++.. |..+..+.+...+ .....+|| +.+++++|.+. .+++.+|..+++.++.++.
T Consensus 117 ~~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~-----all~sSGy~AN~~~i~aL~~~~ 186 (476)
T PLN02955 117 SHPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLE----SSLADLKKKED-----CLVCPTGFAANMAAMVAIGSVA 186 (476)
T ss_pred CCHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHH----HHHHHHHCCCc-----EEEECChHHHHHHHHHHHhhcc
Confidence 378899999888865 6545555544433 34445566 78888889875 5999999999998888872
Q ss_pred -----------CCCCeEEeccCCCCcccCcccccccccccccee--eeEEEecccCCCCCCCCHHHHHHHhhhc--CCcE
Q 023191 134 -----------KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI--FFETMPYRLNESTGYIDYDQLEKSATLF--RPKL 198 (286)
Q Consensus 134 -----------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~ 198 (286)
+++|.|+.....|.+... ++.+... ....+.++.+ |+++|+++++.. +.++
T Consensus 187 ~~~~~~~~~~~~~~d~i~~D~~~HaSI~d--------G~~ls~~~~~a~~~~f~HN------D~~~Le~~L~~~~~~~~~ 252 (476)
T PLN02955 187 SLLAASGKPLKNEKVAIFSDALNHASIID--------GVRLAERQGNVEVFVYRHC------DMYHLNSLLSSCKMKRKV 252 (476)
T ss_pred ccccccccccCCCCcEEEEeccchHHHHH--------HHHhccccCCceEEEeCCC------CHHHHHHHHHhCCCCceE
Confidence 456677777777776653 3333311 1222333333 899999988642 3345
Q ss_pred EEEc--CCCCCCccCHHHHHHHHHhcCCEEEEecccccccccc---CCC-CCCC-CcceEEEeCCCCCCCCCCceEEEEe
Q 023191 199 IVAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GVI-PSPF-EYADVVTTTTHKSLRGPRGAMIFFR 271 (286)
Q Consensus 199 v~i~--~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~-~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~ 271 (286)
|++. +++.|...|+++|.++|++||+++|+|+||+.|.+.. +.. ..++ ...|++++|+.|.| |-.||+++++
T Consensus 253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~-G~~GGfi~gs 331 (476)
T PLN02955 253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAA-GCHGGFIACS 331 (476)
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccch-hccCceeecH
Confidence 5554 6778899999999999999999999999999887653 111 1111 24789999999987 5679999999
Q ss_pred cchhhhhc
Q 023191 272 KGVKEINK 279 (286)
Q Consensus 272 ~~~~~~~~ 279 (286)
+++.++++
T Consensus 332 ~~~~~~l~ 339 (476)
T PLN02955 332 KKWKQLIQ 339 (476)
T ss_pred HHHHHHHH
Confidence 98888777
No 244
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.64 E-value=3e-15 Score=135.35 Aligned_cols=158 Identities=19% Similarity=0.183 Sum_probs=106.1
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+...+|+ +.++++.+ .+ .+++++|+.++.+++.+++++||+|+++++.|.++.... .......|.+
T Consensus 51 p~~~~Le----~~lA~l~~--~~----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~----~~~l~~~G~~ 116 (366)
T PRK07582 51 PTWRALE----AALGELEG--AE----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALA----REYLAPLGVT 116 (366)
T ss_pred ccHHHHH----HHHHHHcC--CC----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH----HHHHhcCeEE
Confidence 4455666 66666662 22 588888888777788899999999999985554432110 0011234655
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
++.++ .+ +. .+ .+.+ ++++|+++ |+| ++...++++|+++|+++|+++++|++|..+. +.. +
T Consensus 117 v~~v~--~~-~~----~~----~~~~-~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~~~--p 179 (366)
T PRK07582 117 VREAP--TA-GM----AE----AALA-GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---GQR--P 179 (366)
T ss_pred EEEEC--CC-Ch----HH----Hhcc-CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---ccC--c
Confidence 55554 32 11 11 2334 79999997 666 4578899999999999999999999975321 111 2
Q ss_pred CC-cceEEEeCCCCCCCCCCc---eEEEEec-chhh
Q 023191 246 FE-YADVVTTTTHKSLRGPRG---AMIFFRK-GVKE 276 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~g---G~l~~~~-~~~~ 276 (286)
+. ++|+++.|+|||++||.| |++++++ ++.+
T Consensus 180 ~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~ 215 (366)
T PRK07582 180 LELGADLVVASDTKALTGHSDLLLGYVAGRDPELMA 215 (366)
T ss_pred hhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHH
Confidence 22 589999999999999765 8888754 4444
No 245
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.64 E-value=1.6e-15 Score=135.35 Aligned_cols=151 Identities=11% Similarity=0.111 Sum_probs=102.8
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
+++.+++++|.+ +|++|+|++ ++.+++ .+.|||+|++++ |+|+.+...+...|.+++.++ .
T Consensus 54 Lr~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~--------P~y~~~~~~~~~~g~~~~~v~--~ 115 (330)
T PRK05664 54 LEAAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLS--------PCYAEHAHAWRRAGHQVRELD--E 115 (330)
T ss_pred HHHHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcC--------CChHHHHHHHHHcCCeEEEec--h
Confidence 446777777753 499999999 666443 468999999999 666666656677786665443 2
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC---HHHHHHHHHhcCCEEEEecccccccccc-CCCCCCCCc-
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-GVIPSPFEY- 248 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~~~~~~- 248 (286)
+++++.+. ++++++++ |+| +|...+ +++|+++|++++++||+|+++... ... .+. .+..
T Consensus 116 ---------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~-~~~~s~~--~~~~~ 181 (330)
T PRK05664 116 ---------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN-TPQHSLA--ACAHR 181 (330)
T ss_pred ---------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC-CCccccc--ccccC
Confidence 24555553 67887776 777 776665 556667778999999999996422 110 111 1111
Q ss_pred -ceEEEeCCCCCCC--CCCceEEEEecchhhhhc
Q 023191 249 -ADVVTTTTHKSLR--GPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 249 -~D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~ 279 (286)
.-+++.|++|.|+ |.|-|+++++.++.+..+
T Consensus 182 ~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~ 215 (330)
T PRK05664 182 PGLIVLRSFGKFFGLAGARLGFVLAEPALLRALA 215 (330)
T ss_pred CCEEEEeeccccccCCCcceEEEEeCHHHHHHHH
Confidence 2277999999874 556699999888776554
No 246
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.63 E-value=7.2e-15 Score=134.86 Aligned_cols=196 Identities=19% Similarity=0.207 Sum_probs=132.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCccc-CCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcC--
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYY-GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK-- 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~-- 134 (286)
..|++++++.+.+.. +..+..+.+.. +..+ ....+.+.+++++|.+. .++++||++++..++.++..
T Consensus 60 ~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~----~~~~le~~la~~~g~~~-----~~~~~SG~~An~~ai~~l~~~~ 129 (406)
T PRK13393 60 QHPAVLAAMHEALDT-CGAGAGGTRNISGTNH----YHVLLEAELADLHGKEA-----ALLFTSGYVSNWAALSTLGSRL 129 (406)
T ss_pred CCHHHHHHHHHHHHH-cCCCCcccccccCChH----HHHHHHHHHHHHhCCCc-----EEEeCCcHHHHHHHHHHhhcCC
Confidence 378999999998865 42232222221 2222 23345588888888643 59999999888878887755
Q ss_pred CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh---cCCcEEEEc-CCC-CCCc
Q 023191 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKLIVAG-ASA-YARL 209 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~-~~n-~g~~ 209 (286)
+||.|+.....|++...+. ...|.+...++ . .|++++++.+.. .++++|+++ +.| +|..
T Consensus 130 ~g~~I~~~~~~H~s~~~~~--------~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~ 193 (406)
T PRK13393 130 PGCVILSDELNHASMIEGI--------RHSRAEKRIFR--H------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDI 193 (406)
T ss_pred CCCEEEEccchhHHHHHHH--------HHcCCeEEEeC--C------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCch
Confidence 7888887777787765432 23343333232 1 367777777653 257888887 444 7789
Q ss_pred cCHHHHHHHHHhcCCEEEEecccccccccc---CCC-CCCC-CcceEEEeCCCCCCCCCCceEEEEecchhhhhcc
Q 023191 210 YDYERIRKVCNKQKAIMLADMAHISGLVAA---GVI-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~-~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~~ 280 (286)
.|+++|.++|++|++++++|++|+.|.+.. +.. ..++ ...|+++.++.|.|+. .||++++++++.+.+++
T Consensus 194 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~GG~~~~~~~~~~~l~~ 268 (406)
T PRK13393 194 APIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MGGYITGSAALCDFIRS 268 (406)
T ss_pred hCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cCceeeCCHHHHHHHHH
Confidence 999999999999999999999999776431 111 1111 1368889999999865 46888888887766553
No 247
>PRK07049 methionine gamma-lyase; Validated
Probab=99.63 E-value=8.5e-15 Score=134.78 Aligned_cols=166 Identities=17% Similarity=0.174 Sum_probs=114.0
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeee
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (286)
....|+ +.++++.|.+. .+++++|+.++.+++.+++++||+|+++++.|+++..... ......|.++
T Consensus 84 t~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~----~~l~~~Gi~~ 150 (427)
T PRK07049 84 NSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLA----KTFRNFGVGA 150 (427)
T ss_pred CHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHhcCcEE
Confidence 345555 77778888653 4677777778887999999999999999966655422100 0112345433
Q ss_pred EEEecccCCCCCCCCHHHHHHHhh----hcCCcEEEEc-CCC-CCCccCHHHHHHHHHh------cCCEEEEeccccccc
Q 023191 169 ETMPYRLNESTGYIDYDQLEKSAT----LFRPKLIVAG-ASA-YARLYDYERIRKVCNK------QKAIMLADMAHISGL 236 (286)
Q Consensus 169 ~~v~~~~~~~~~~~d~e~l~~~i~----~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~------~~~~vivD~a~~~g~ 236 (286)
..++ + ..|++++++.+. +.++|+|+++ |+| +|.+.++++|.++|++ +++++++|++.....
T Consensus 151 v~~~---~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~ 223 (427)
T PRK07049 151 VGFA---D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPV 223 (427)
T ss_pred EEEe---C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccc
Confidence 2232 1 246778877664 2379999997 666 7788999999999988 899999999954322
Q ss_pred cccCCCCCCCC-cceEEEeCCCCCCCCC---CceEEEEecchhhhhc
Q 023191 237 VAAGVIPSPFE-YADVVTTTTHKSLRGP---RGAMIFFRKGVKEINK 279 (286)
Q Consensus 237 ~~~~~~~~~~~-~~D~v~~s~~K~l~gp---~gG~l~~~~~~~~~~~ 279 (286)
. ..++. ++|+++.|++|+++|. ++|+++.++++.+..+
T Consensus 224 ~-----~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~ 265 (427)
T PRK07049 224 F-----QKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVR 265 (427)
T ss_pred c-----CCccccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHH
Confidence 1 12333 5899999999999863 5599988877665544
No 248
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.63 E-value=5.7e-15 Score=133.91 Aligned_cols=172 Identities=15% Similarity=0.151 Sum_probs=113.7
Q ss_pred cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccc
Q 023191 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (286)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
|+++....+|| +.+++++|.+. -|.+.+|+.|..+++...++|||+| +.+.|-. .. ...+..
T Consensus 67 yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~---Tt----~ahIe~ 128 (450)
T TIGR02618 67 YAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFT---TT----RYHQEK 128 (450)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHH---HH----HHHHHh
Confidence 56667777888 77777889886 2455555556554666669999987 3422211 11 111344
Q ss_pred ceeeeEEEecc------c-CCCCCCCCHHHHHHHhhhc---CCcEEEEc-CCC-C-CCc---cCHHHHHHHHHhcCCEEE
Q 023191 164 VSIFFETMPYR------L-NESTGYIDYDQLEKSATLF---RPKLIVAG-ASA-Y-ARL---YDYERIRKVCNKQKAIML 227 (286)
Q Consensus 164 ~g~~~~~v~~~------~-~~~~~~~d~e~l~~~i~~~---~tk~v~i~-~~n-~-g~~---~~l~~I~~ia~~~~~~vi 227 (286)
.|..+.-++.+ . ++.++.+|++++++.|++. ++++|.+. ++| . |.. .++++|.++|++||+.||
T Consensus 129 ~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi 208 (450)
T TIGR02618 129 NGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVF 208 (450)
T ss_pred CCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEE
Confidence 55433223211 0 1346889999999999862 23455554 666 3 455 458999999999999999
Q ss_pred Eeccccccccc-c-----CCCCCC--------CCcceEEEeCCCCCCCCCCceEEEEecc
Q 023191 228 ADMAHISGLVA-A-----GVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (286)
Q Consensus 228 vD~a~~~g~~~-~-----~~~~~~--------~~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (286)
.|+||.++.-. . +....+ +.++|.+++|++|.+++|.||+|+++++
T Consensus 209 ~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~ 268 (450)
T TIGR02618 209 YDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD 268 (450)
T ss_pred EEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH
Confidence 99999985421 1 111111 2369999999999999999999998874
No 249
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.63 E-value=4.5e-15 Score=128.66 Aligned_cols=168 Identities=17% Similarity=0.163 Sum_probs=123.7
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
++..+.+| ++++.+-|--. .+.+.||..|...++..++.+||+|+..+.-|++....... ...-.|+
T Consensus 61 NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~----tl~~~Gi 127 (426)
T COG2873 61 NPTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSH----TLKRLGI 127 (426)
T ss_pred CchHHHHH----HHHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHH----HHHhcCc
Confidence 44566777 66776665433 37778898888879999999999999999888876542211 1234454
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
+++.+ + ..|++.++++|++ +||+|++. -.| -+.+.|++.|+++||+|++++|||..-+.+.+ ..
T Consensus 128 ~v~fv--d------~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl-----~r 193 (426)
T COG2873 128 EVRFV--D------PDDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYL-----CR 193 (426)
T ss_pred EEEEe--C------CCCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCccee-----cc
Confidence 44333 2 2379999999999 99999996 555 33788999999999999999999998544422 23
Q ss_pred CCC-cceEEEeCCCCCCCCCCc--eEEEEecchhhhhccC
Q 023191 245 PFE-YADVVTTTTHKSLRGPRG--AMIFFRKGVKEINKQG 281 (286)
Q Consensus 245 ~~~-~~D~v~~s~~K~l~gp~g--G~l~~~~~~~~~~~~~ 281 (286)
|++ |+|+|+.|.+||++|... |.+++...-.||.+.+
T Consensus 194 P~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~ 233 (426)
T COG2873 194 PIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANG 233 (426)
T ss_pred hhhcCCCEEEEeecccccCCccccceEEEeCCccccccCC
Confidence 444 699999999999988644 7777777777776543
No 250
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.62 E-value=5.2e-15 Score=132.84 Aligned_cols=195 Identities=13% Similarity=0.091 Sum_probs=130.6
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCC---cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC-hH-HHHHHHHHh
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGG---NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SP-SNFQVYTAL 132 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG-~~-a~~~~l~a~ 132 (286)
.|..|++++.+++.+ ++ ..+...+.- .....++-+.+++.++++++.+.+. +|++++| ++ ++.+++..+
T Consensus 3 ~p~~v~~~~~~~~~~-~~--~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~---~v~~~~gsgT~a~ea~~~nl 76 (349)
T TIGR01364 3 LPEEVLEQAQKELLN-FN--GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNY---EVLFLQGGATGQFAAVPLNL 76 (349)
T ss_pred CCHHHHHHHHHHHhC-cc--CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCchHHHHHHHHhc
Confidence 588999999988865 21 111111111 2223467778899999999974332 4777666 44 888899999
Q ss_pred cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CCCCCCHHHHHHHhhhcCCcEEEEc--CCCCCCc
Q 023191 133 LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG--ASAYARL 209 (286)
Q Consensus 133 ~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~~tk~v~i~--~~n~g~~ 209 (286)
+++||++++.....-++ .+ ...++..|. +..+..+-.. ....+|+++++ +++ ++++|.++ .+.+|..
T Consensus 77 ~~~~~~~l~i~~G~fg~---r~---~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~ 146 (349)
T TIGR01364 77 LAEGKVADYIVTGAWSK---KA---AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVE 146 (349)
T ss_pred CCCCCeEEEEECCHHHH---HH---HHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEe
Confidence 99999999876222111 11 123445565 4444322111 22356777665 344 78998886 4447765
Q ss_pred cCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 210 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
.+ ++++.+++++++|+++++|..+.++.. .|++++|+||+| ||.| |++++++++.+..+
T Consensus 147 ~~-----~l~~~~~~l~iVDavss~g~~~id~~~-----~d~~~~ssqK~l-gP~Glg~l~~s~~~~~~~~ 206 (349)
T TIGR01364 147 FR-----ELPDVKNAPLVADMSSNILSRPIDVSK-----FGLIYAGAQKNI-GPAGLTVVIVRKDLLGRAS 206 (349)
T ss_pred cc-----eecccCCCeEEEEccccccCccCCHHH-----ccEEEEeccccc-CCCceEEEEECHHHHhhcc
Confidence 55 677778999999999999998877653 469999999988 5999 99999998765443
No 251
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.61 E-value=8.5e-15 Score=127.13 Aligned_cols=194 Identities=19% Similarity=0.266 Sum_probs=134.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD 137 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd 137 (286)
+.|+++++|.++-.. +..-|+..+....++ +++++++|... -+++.+|+.+|..++.+.+.||+
T Consensus 12 ~~~~m~eam~~a~~~-------~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~lal~~~~~~~~ 75 (342)
T COG2008 12 PTPEMREALAAANAV-------GDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLALAAHCQPGE 75 (342)
T ss_pred CCHHHHHHHHhcccc-------CCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHHHHHhcCCCC
Confidence 588999999775421 122356666666666 77888888732 35666677799999999999999
Q ss_pred eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc------CCcEEEEcCCC-CCCcc
Q 023191 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RPKLIVAGASA-YARLY 210 (286)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~------~tk~v~i~~~n-~g~~~ 210 (286)
.|++....|-.....+ +..+.+. ...+++ .+.+++.+++++|++.+... .+.+++++.++ .|++.
T Consensus 76 ~vi~~~~aHi~~~E~G------a~~~~~~-~~~~~~-~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy 147 (342)
T COG2008 76 SVICHETAHIYTDECG------APEFFGG-GQKLPI-VPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVY 147 (342)
T ss_pred eEEEeccccceecccC------cHHHHcC-Cceecc-CCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceec
Confidence 9999886665443322 2233332 122322 23367899999999987641 24556666444 67666
Q ss_pred C---HHHHHHHHHhcCCEEEEeccccccccc-cCCCCCCCC-cceEEEeCCCCCCCCCCceEEEEecchh
Q 023191 211 D---YERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVK 275 (286)
Q Consensus 211 ~---l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~~-~~D~v~~s~~K~l~gp~gG~l~~~~~~~ 275 (286)
| +++|.++||+|++.++.|+|..+.... .+.....+. ++|++.++++|.++.|.|.+++++.++.
T Consensus 148 ~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~ 217 (342)
T COG2008 148 PLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFA 217 (342)
T ss_pred CHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHH
Confidence 5 667788899999999999997655443 232222222 6999999999999999889999998755
No 252
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.61 E-value=5.2e-15 Score=132.23 Aligned_cols=189 Identities=14% Similarity=0.101 Sum_probs=125.0
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HH
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~ 125 (286)
+.++|+.+||+..+. .. .++| |. ....+ +++.+++++|++++ +|++|+|++ ++
T Consensus 17 ~~i~l~~Nenp~~~~------~~-~~~Y----p~-------~~~~~----lr~~ia~~~~~~~~----~I~it~Gs~~~l 70 (332)
T PRK06425 17 RIIDFSANINDFMDI------GD-ISIY----PE-------ISYTD----IEDQIKIYTQGLKI----KVLIGPGLTHFI 70 (332)
T ss_pred CEEEeccccCCCcCh------hh-cccC----cC-------cCHHH----HHHHHHHHhCCCcc----eEEECCCHHHHH
Confidence 468999999987410 01 1223 22 12233 45888888999875 599999999 77
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CC
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~ 204 (286)
..++. +++||+ |++++ |.|..|...++..|.+++.+|+ + + ..+|.+.+++ .++|+|+++ |+
T Consensus 71 ~~~~~-~~~~~~-vv~~~--------P~y~~y~~~~~~~G~~v~~vp~--~-~-~~~~~~~l~~----~~~k~v~l~nP~ 132 (332)
T PRK06425 71 YRLLS-YINVGN-IIIVE--------PNFNEYKGYAFTHGIRISALPF--N-L-INNNPEILNN----YNFDLIFIVSPD 132 (332)
T ss_pred HHHHH-HhCCCc-EEEeC--------CChHHHHHHHHHcCCeEEEEeC--C-c-ccCcHHHHhh----cCCCEEEEeCCC
Confidence 75665 578874 66778 6776666677788877766664 3 1 3456554442 389999997 66
Q ss_pred C-CCCccC---HHHHHHHHHhcCCEEEEeccccccccccCCCC-CC-CC--cceEEEeCCCCCCC--CCCceEEEEecch
Q 023191 205 A-YARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SP-FE--YADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (286)
Q Consensus 205 n-~g~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~-~~--~~D~v~~s~~K~l~--gp~gG~l~~~~~~ 274 (286)
| +|...+ +++|+++|+++++++|+|+++. .....+... .. .. ..-+++.|++|.++ |.|-|++++++++
T Consensus 133 NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~l 211 (332)
T PRK06425 133 NPLGNLISRDSLLTISEICRKKGALLFIDEAFI-DFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYN 211 (332)
T ss_pred CCcCCccCHHHHHHHHHHHHHcCCEEEEecchh-ccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHH
Confidence 6 776655 6677888899999999999954 222211100 00 01 12377899999774 5556999999887
Q ss_pred hhhhcc
Q 023191 275 KEINKQ 280 (286)
Q Consensus 275 ~~~~~~ 280 (286)
.+..++
T Consensus 212 i~~l~~ 217 (332)
T PRK06425 212 MKISRK 217 (332)
T ss_pred HHHHHH
Confidence 766553
No 253
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.61 E-value=4.4e-15 Score=134.24 Aligned_cols=165 Identities=22% Similarity=0.247 Sum_probs=113.5
Q ss_pred CcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccce
Q 023191 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (286)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (286)
+++....+| +.++.+.|.+. .+++.||+.|+.+++.+++++||+|++++..|++...-. .......|
T Consensus 53 gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~----~~~l~~~g 119 (386)
T PF01053_consen 53 GNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLL----EELLPRFG 119 (386)
T ss_dssp C-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHH----HHCHHHTT
T ss_pred ccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhh----hhhhcccC
Confidence 345556666 66777777753 477888888887799999999999999997666543211 11112234
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcC-CEEEEeccccccccccCCC
Q 023191 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVI 242 (286)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~-~~vivD~a~~~g~~~~~~~ 242 (286)
.++..+ +. -|++++++++++ +|++|++. |+| +..+.|+++|+++|+++| +++++|.+.+.+. .
T Consensus 120 v~v~~~--d~------~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~-----~ 185 (386)
T PF01053_consen 120 VEVTFV--DP------TDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPY-----N 185 (386)
T ss_dssp SEEEEE--ST------TSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTT-----T
T ss_pred cEEEEe--Cc------hhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccccee-----e
Confidence 333222 22 389999999998 99999997 777 457889999999999998 9999999965442 2
Q ss_pred CCCCC-cceEEEeCCCCCCCCCC---ceEEEEec--chhhh
Q 023191 243 PSPFE-YADVVTTTTHKSLRGPR---GAMIFFRK--GVKEI 277 (286)
Q Consensus 243 ~~~~~-~~D~v~~s~~K~l~gp~---gG~l~~~~--~~~~~ 277 (286)
..++. |+|+++.|.+|+++|.. +|+++++. ++.+.
T Consensus 186 ~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~ 226 (386)
T PF01053_consen 186 QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDR 226 (386)
T ss_dssp C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHH
T ss_pred eccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhh
Confidence 23455 59999999999998876 48888776 44443
No 254
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.61 E-value=6.3e-15 Score=133.48 Aligned_cols=158 Identities=17% Similarity=0.196 Sum_probs=109.4
Q ss_pred CcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccce
Q 023191 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (286)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (286)
+++...+|| +.++++.|.+. .+.+.||+.|+.+++.+++++||+|+++...|+..+... ...+...|
T Consensus 62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~----~~~~~~~G 128 (384)
T PRK06434 62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF----NKVLKTLG 128 (384)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHHhcC
Confidence 445667777 67778888765 488888988887788999999999999876555544211 12233455
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC
Q 023191 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (286)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~ 243 (286)
..+..+ +.++. ..++ +++.++|+|++. ++| ++...|+++|+++|++++ +++|++++.+.. .
T Consensus 129 i~v~fv--d~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~-----~ 191 (384)
T PRK06434 129 IHVDYI--DTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN-----Q 191 (384)
T ss_pred cEEEEE--CCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCccc-----C
Confidence 544444 33311 1121 223378999997 776 568899999999999998 467999754432 2
Q ss_pred CCCC-cceEEEeCCCCCCCCCC---ceEEEEecc
Q 023191 244 SPFE-YADVVTTTTHKSLRGPR---GAMIFFRKG 273 (286)
Q Consensus 244 ~~~~-~~D~v~~s~~K~l~gp~---gG~l~~~~~ 273 (286)
.++. ++|++++|+||+++|+. ||+++++++
T Consensus 192 ~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~ 225 (384)
T PRK06434 192 NPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK 225 (384)
T ss_pred CchhcCCCEEEeecccccCCCCCceEEEEecCcH
Confidence 2333 69999999999999866 588877653
No 255
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.60 E-value=2.3e-14 Score=130.28 Aligned_cols=172 Identities=15% Similarity=0.145 Sum_probs=112.2
Q ss_pred cCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccc
Q 023191 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (286)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
|++.+...+|| +.+++++|.+. -|.+.+|+.++.+++...++|||+| +...|-. .... .+..
T Consensus 74 Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~---Tt~a----hI~~ 135 (460)
T PRK13237 74 YAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFT---TTRY----HQEL 135 (460)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCccchH---hhHH----HHHh
Confidence 45666777888 67777889876 3666677776664555558999975 3321111 1110 1233
Q ss_pred ceeeeEEEec-------ccCCCCCCCCHHHHHHHhhhc---CCcEEEEc-CCC-C-CCc---cCHHHHHHHHHhcCCEEE
Q 023191 164 VSIFFETMPY-------RLNESTGYIDYDQLEKSATLF---RPKLIVAG-ASA-Y-ARL---YDYERIRKVCNKQKAIML 227 (286)
Q Consensus 164 ~g~~~~~v~~-------~~~~~~~~~d~e~l~~~i~~~---~tk~v~i~-~~n-~-g~~---~~l~~I~~ia~~~~~~vi 227 (286)
.|..+.-+.. ..++.++.+|+++|+++|++. ++++|.+. +.| . |.. .++++|.++|++||+.||
T Consensus 136 ~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi 215 (460)
T PRK13237 136 NGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVF 215 (460)
T ss_pred CCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEE
Confidence 4432211110 112356899999999999762 23344443 555 4 333 468999999999999999
Q ss_pred Eeccccccccc------cCCCCCC--------CCcceEEEeCCCCCCCCCCceEEEEecc
Q 023191 228 ADMAHISGLVA------AGVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (286)
Q Consensus 228 vD~a~~~g~~~------~~~~~~~--------~~~~D~v~~s~~K~l~gp~gG~l~~~~~ 273 (286)
.|+||.+|... .+....+ +.++|.+++|+||.+.++.||+++++++
T Consensus 216 ~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~ 275 (460)
T PRK13237 216 FDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE 275 (460)
T ss_pred EECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH
Confidence 99999988331 1111122 2369999999999999999999999985
No 256
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.60 E-value=1.4e-14 Score=123.42 Aligned_cols=211 Identities=17% Similarity=0.146 Sum_probs=141.1
Q ss_pred cCceecCCCC-CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHH
Q 023191 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSN 125 (286)
Q Consensus 47 ~~i~L~~~e~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~ 125 (286)
++|-|..+.- ..|..+.....+...+.|.++...+++.+... .-.+-+.+-.+++.+.|....+ ++++.+++++
T Consensus 31 ~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~-W~~lp~~lgdklApLiGA~~~E----vvv~dtts~n 105 (407)
T COG3844 31 GVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKAD-WFDLPERLGDKLAPLIGARAGE----VVVTDTTSIN 105 (407)
T ss_pred CeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCc-hhhchhHHHHHhhhhhcCCCCc----eEEeCCcchH
Confidence 4455554333 34544444444444333433333333322222 3345556779999999997754 8888888844
Q ss_pred HH-HHHHh--cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 126 FQ-VYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 126 ~~-~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
+. ++.+. ..+|++|++++- .++.+-.| .....+.+.+... + -...+.++++++.+++ ++.+|+++
T Consensus 106 l~k~L~aalr~~~~r~vIv~E~--~~fpTdly-~a~g~~~~~~~~~-----~---~~~~~~P~~~~~~~~d-d~AvV~L~ 173 (407)
T COG3844 106 LFKVLAAALRPQEGRRVIVSEG--DNFPTDLY-IAEGLADLLGIGY-----D---LEGVIAPRALEEAITD-DVAVVLLS 173 (407)
T ss_pred HHHHHHHHhccCCCceEEeecC--CCCCcchh-hhcchhhhhcccc-----c---ceeeeChHHHHHhhcc-ceEEEEec
Confidence 32 55555 456899998762 22221222 2222233443211 1 1246678899999988 89999988
Q ss_pred CCC--CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCC-CCc-eEEEEecchhhh
Q 023191 203 ASA--YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG-PRG-AMIFFRKGVKEI 277 (286)
Q Consensus 203 ~~n--~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~g-p~g-G~l~~~~~~~~~ 277 (286)
..| +|...++.+|.++||+|+++++.|-||++|.++.+++..+ +|+.++++||.++| |.+ +++++.++..+.
T Consensus 174 ~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~g---aDfaigcsyKYLNgGPGapa~l~v~~~h~e~ 249 (407)
T COG3844 174 HVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAG---ADFAIGCSYKYLNGGPGAPAGLFVAPRHRER 249 (407)
T ss_pred cccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccC---CCeeeeeeceeccCCCCCceeEEeccccccc
Confidence 666 7899999999999999999999999999999999998887 99999999999955 555 999998765543
No 257
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.59 E-value=2.1e-14 Score=126.65 Aligned_cols=175 Identities=15% Similarity=0.125 Sum_probs=132.0
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH---HHHHHHHHh-cC----CCCeEEeccCCCCcccCccccccc
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP---SNFQVYTAL-LK----PHDRIMALDLPHGGHLSHGYQTDT 158 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~---a~~~~l~a~-~~----~Gd~Vl~~~~~~~~~~~~~~~~~~ 158 (286)
.++..++-..+.+|++++.|.|. +.++..+|+. +-++++++. -. ..+.+|+++..|+.+..
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA------- 172 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA------- 172 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh-------
Confidence 35667777788899999999987 5688889988 333366666 22 34689999999999854
Q ss_pred cccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC-CccCHHHHHHHHHhcCCEEEEeccccccc
Q 023191 159 KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA-RLYDYERIRKVCNKQKAIMLADMAHISGL 236 (286)
Q Consensus 159 ~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g-~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (286)
.+.+.|-+++++ +.+ +++.+|+++|++++.+ ++.++.++++| .| ...++.+|+++.|++|..|..|+|..-..
T Consensus 173 -SAam~G~~VV~V--~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~ 247 (496)
T COG1003 173 -SAAMAGFKVVVV--KCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAI 247 (496)
T ss_pred -hHhhcCceEEEE--ecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhh
Confidence 455778555555 455 6799999999999997 99999998666 56 55679999999999999999999965444
Q ss_pred cccCCCCCCCCcceEEEeCCCCCCCCCCc------eEEEEecchhhhhc
Q 023191 237 VAAGVIPSPFEYADVVTTTTHKSLRGPRG------AMIFFRKGVKEINK 279 (286)
Q Consensus 237 ~~~~~~~~~~~~~D~v~~s~~K~l~gp~g------G~l~~~~~~~~~~~ 279 (286)
+. +...+--|+|++-.++||+|+.|.| |-+.++..+.+.+-
T Consensus 248 vG--~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP 294 (496)
T COG1003 248 VG--LARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLP 294 (496)
T ss_pred hc--cccccccccceEEeecccccccCCCCCCCCCCceehHhhccccCC
Confidence 33 2222222699999999999955433 56787877766553
No 258
>PRK08637 hypothetical protein; Provisional
Probab=99.58 E-value=3.3e-14 Score=129.76 Aligned_cols=176 Identities=16% Similarity=0.114 Sum_probs=112.8
Q ss_pred cCCcchHHHHHHHHHHHHHHHCC-CCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccc
Q 023191 84 YGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKI 161 (286)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~g-~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~ 161 (286)
|+...+..+|++++.+++.+..+ .+++++ .+|++|+|++ ++..++.++++|||+|++++| .|+.|...+
T Consensus 40 Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P--------~y~~~~~~~ 110 (388)
T PRK08637 40 YAPPQGIPELRDLWQEKMLRENPSLSGKKM-SLPIVTNALTHGLSLVADLFVDQGDTVLLPDH--------NWGNYKLTF 110 (388)
T ss_pred CCCCCCCHHHHHHHHHHHhccCcccccccc-ceeeEccchHHHHHHHHHHhcCCCCEEEEcCC--------CCccHHHHH
Confidence 45557788899888887766543 233210 2589999999 887788999999999999994 444444332
Q ss_pred -ccceeeeEEEecccCCCCCCCCHHHHHHHhh---hcCCcEEEEc-CCC-CCCccC---HHHHHHHHHh-----cCCEEE
Q 023191 162 -SAVSIFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLIVAG-ASA-YARLYD---YERIRKVCNK-----QKAIML 227 (286)
Q Consensus 162 -~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~---~~~tk~v~i~-~~n-~g~~~~---l~~I~~ia~~-----~~~~vi 227 (286)
...|.+++.+| +..+++.+|++++++.++ +..+++++++ |+| +|...+ +++|+++|++ |+++||
T Consensus 111 ~~~~g~~vv~v~--~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI 188 (388)
T PRK08637 111 NTRRGAEIVTYP--IFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAV 188 (388)
T ss_pred HHhcCCEEEEec--ccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 24566665555 422345789999999886 2134456666 677 775544 6677777765 899999
Q ss_pred EeccccccccccC-CCCC---CC-C---cce-EEEeCCCCCC--CCCCceEEEEe
Q 023191 228 ADMAHISGLVAAG-VIPS---PF-E---YAD-VVTTTTHKSL--RGPRGAMIFFR 271 (286)
Q Consensus 228 vD~a~~~g~~~~~-~~~~---~~-~---~~D-~v~~s~~K~l--~gp~gG~l~~~ 271 (286)
+|+++. .....+ ..+. .+ . .+. +.+.|++|.+ .|.|.|++++.
T Consensus 189 ~De~Y~-~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 189 VDDAYF-GLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred ecccch-hcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 999954 222211 1110 00 1 111 2245999965 45555999864
No 259
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.57 E-value=1.3e-14 Score=138.54 Aligned_cols=166 Identities=22% Similarity=0.170 Sum_probs=122.2
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
+..+..++.||++. ..++++|+| +|.+++++++.+||.||+.+.+|.|...- .+.+.|+.++.+.-.
T Consensus 178 eAq~~AA~~fgAd~-----tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hg-------aLiLsGa~PVYl~P~ 245 (720)
T PRK13578 178 DAQKHAAKVFNADK-----TYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG-------ALIQAGATPVYLETA 245 (720)
T ss_pred HHHHHHHHHhCCCc-----eEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH-------HHHHcCCeEEEeecc
Confidence 35588999999986 488889999 99999999999999999999999887641 134667666554422
Q ss_pred cCCCC--CCCCH-----HHHHHHhhhc--------C-CcEEEEcCCC-CCCccCHHHHHHH-HHhcCCEEEEeccccccc
Q 023191 175 LNEST--GYIDY-----DQLEKSATLF--------R-PKLIVAGASA-YARLYDYERIRKV-CNKQKAIMLADMAHISGL 236 (286)
Q Consensus 175 ~~~~~--~~~d~-----e~l~~~i~~~--------~-tk~v~i~~~n-~g~~~~l~~I~~i-a~~~~~~vivD~a~~~g~ 236 (286)
.+.-+ +.++. +.|++++.++ + .|+++++.++ .|.+.++++|+++ ++.++ ++++|+||++..
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 22111 23454 4588888763 1 4888888666 7899999999998 68888 999999988655
Q ss_pred cccC----CCCCCCC-cce----EEEeCCCCCCCCCCc-eEEEEecch
Q 023191 237 VAAG----VIPSPFE-YAD----VVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 237 ~~~~----~~~~~~~-~~D----~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
.... +.+..+. ++| +++-|+||++++-.. ++|-.+++.
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~ 372 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH 372 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc
Confidence 4333 2222233 688 999999999988655 888887654
No 260
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.57 E-value=6.9e-14 Score=123.70 Aligned_cols=204 Identities=13% Similarity=0.091 Sum_probs=127.8
Q ss_pred CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHH
Q 023191 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTA 131 (286)
Q Consensus 53 ~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a 131 (286)
-|.+..++++++++...+....+.-+ +.........+. .+.+.....+|... +.+++..+ +.++++.+
T Consensus 34 lG~s~~~~e~iea~~~~~~~~v~Le~----~l~~g~~~~R~~-~~~~~~~~~~~aea------~~ivnnn~aAVll~~~a 102 (395)
T COG1921 34 LGRSLYSPEAIEAMKEAMRAPVELET----DLKTGKRGARLT-ELAELLCGLTGAEA------AAIVNNNAAAVLLTLNA 102 (395)
T ss_pred CCCccCCHHHHHHHHHHhcccceeee----ecccchhhHHHH-HHHHHHhcccchhh------eeeECCcHHHHHHHHhh
Confidence 36667899999999887755221100 011111122222 23344444444332 55555555 77756666
Q ss_pred hcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE-cCCCCC--C
Q 023191 132 LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASAYA--R 208 (286)
Q Consensus 132 ~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i-~~~n~g--~ 208 (286)
+.. +.+|++...+-.. .+.+.....+...|.+++.+ . .....+..+++.+|.+ +|++++= ..+|++ .
T Consensus 103 l~~-~~EvVis~g~lV~---gg~~~v~d~~~~aG~~l~Ev--G---~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~~ 172 (395)
T COG1921 103 LAE-GKEVVVSRGELVE---GGAFRVPDIIRLAGAKLVEV--G---TTNRTHLKDYELAINE-NTALLLKVHSSNYGFTG 172 (395)
T ss_pred hcc-CCeEEEEcccccc---CCCCChhHHHHHcCCEEEEe--c---ccCcCCHHHHHHHhcc-CCeeEEEEeeccccccc
Confidence 655 5566655422111 11222233566788766555 2 2346788999999998 8877653 477766 4
Q ss_pred ccCHHHHHHHHHhcCCEEEEeccccccccc---cCCCCCCCCcceEEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 209 LYDYERIRKVCNKQKAIMLADMAHISGLVA---AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 209 ~~~l~~I~~ia~~~~~~vivD~a~~~g~~~---~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
..+.++++++||++++++++|.+. |... .++....-.|+|+|++|++|.|+||++|++++|+++.+-++
T Consensus 173 ~l~~~~l~~ia~~~~lpvivD~aS--g~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq 244 (395)
T COG1921 173 MLSEEELVEIAHEKGLPVIVDLAS--GALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQ 244 (395)
T ss_pred cccHHHHHHHHHHcCCCEEEecCC--ccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHHHHHHHH
Confidence 567889999999999999999983 3321 12222222379999999999999999999999999987665
No 261
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.57 E-value=1.8e-14 Score=125.26 Aligned_cols=176 Identities=20% Similarity=0.274 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEecc-CCCCcccCccc-cc-cccccccce
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGY-QT-DTKKISAVS 165 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~-~~~~~~~~~~~-~~-~~~~~~~~g 165 (286)
+.+.|+ +.+++.||.+..- +...+.||+.|+..++.++++|||+.+... ..|.......- .- ..-...-.|
T Consensus 55 GRd~le----~iyA~vfgaE~AL--VRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~G 128 (403)
T PF06838_consen 55 GRDKLE----RIYADVFGAEDAL--VRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFG 128 (403)
T ss_dssp HHHHHH----HHHHHHCT-SEEE--EETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT
T ss_pred cHHHHH----HHHHHHhCchhhh--hcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhC
Confidence 455555 8899999997643 455678999988889999999999999653 33332211100 00 011133456
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC-----CccCHHHHHHHHHhc--CCEEEEecccccccc
Q 023191 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA-----RLYDYERIRKVCNKQ--KAIMLADMAHISGLV 237 (286)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g-----~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~ 237 (286)
..++.+++. +++.+|++.+++.+++ +||+|+|.-|- +. .+.+++++.+++|+. +++++||.++ |.+
T Consensus 129 i~Y~~v~L~---~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCY--GEF 202 (403)
T PF06838_consen 129 IKYREVPLT---EDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCY--GEF 202 (403)
T ss_dssp -EEEE--B----TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TT--TTT
T ss_pred ceeEEEeec---CCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCc--cee
Confidence 667777643 5689999999999997 99999995222 22 445566666777664 7899999984 434
Q ss_pred ccCCCCCCCCcceEEEeCCCCCCCC---CCceEEEEecchhhh
Q 023191 238 AAGVIPSPFEYADVVTTTTHKSLRG---PRGAMIFFRKGVKEI 277 (286)
Q Consensus 238 ~~~~~~~~~~~~D~v~~s~~K~l~g---p~gG~l~~~~~~~~~ 277 (286)
.....|.. -|+|++.+|+-|..+| |.||++++|+++.+.
T Consensus 203 vE~~EP~~-vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~ 244 (403)
T PF06838_consen 203 VETQEPTE-VGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVER 244 (403)
T ss_dssp TSSS-GGG-GT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHH
T ss_pred ccccCccc-cchhheeccceeCCCCCccCcCCEEechHHHHHH
Confidence 33333221 2799999999999866 788999999988753
No 262
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.56 E-value=1.9e-14 Score=129.01 Aligned_cols=156 Identities=13% Similarity=0.090 Sum_probs=102.6
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
+++.+++++|++..+ +|++|+|++ ++. ++..++++|| |++++ |+|+.|...+...|.+++.+ +.
T Consensus 58 L~~~ia~~~~~~~~~---~I~i~~Gs~e~i~-~l~~~~~~g~-v~v~~--------P~y~~y~~~~~~~g~~~~~v--~~ 122 (339)
T PRK06959 58 LAACAARYYGAPDAA---HVLPVAGSQAAIR-ALPALLPRGR-VGIAP--------LAYSEYAPAFARHGHRVVPL--DE 122 (339)
T ss_pred HHHHHHHHhCCCCcc---cEEECcCHHHHHH-HHHHhcCCCe-EEEcC--------CCcHHHHHHHHHCCCEEEee--cc
Confidence 558899999996422 599999999 766 4455678887 88888 66666665667777665444 33
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHH---HHhcCCEEEEeccccccccccCCCCCCCCc-c
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKV---CNKQKAIMLADMAHISGLVAAGVIPSPFEY-A 249 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~i---a~~~~~~vivD~a~~~g~~~~~~~~~~~~~-~ 249 (286)
+ + +. +.+ ++++++++ |+| +|...+.+++.++ |++++.++|+|+++..-......... ... .
T Consensus 123 ~-~------~~----~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~-~~~~~ 189 (339)
T PRK06959 123 A-A------DT----LPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAH-TDRPG 189 (339)
T ss_pred c-c------hh----ccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhc-cCCCC
Confidence 3 1 22 222 56778887 766 7777776655554 56789999999996532111111100 011 1
Q ss_pred eEEEeCCCCCCC--CCCceEEEEecchhhhhcc
Q 023191 250 DVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 250 D~v~~s~~K~l~--gp~gG~l~~~~~~~~~~~~ 280 (286)
-+++.|++|.|+ |.|-|+++++.++.+..++
T Consensus 190 vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~ 222 (339)
T PRK06959 190 LVVLRSVGKFFGLAGVRAGFVLAAPALLAALRD 222 (339)
T ss_pred EEEEecChhhcCCcchheEEEecCHHHHHHHHH
Confidence 277999999774 5556999999888776654
No 263
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.56 E-value=2.5e-14 Score=129.18 Aligned_cols=197 Identities=10% Similarity=0.000 Sum_probs=125.4
Q ss_pred ceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC-hH-HHH
Q 023191 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SP-SNF 126 (286)
Q Consensus 49 i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG-~~-a~~ 126 (286)
..+++|....++.+++++........ +.+. -.....++-+.+++.+++++|++.+. +|++++| ++ ++.
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~~~~---~~~h----r~~~f~~~~~~~r~~l~~l~~~~~~~---~v~f~~gs~T~a~~ 74 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAASLF---GTSH----RQAPVKNLVGRVREGLAELFSLPDGY---EVILGNGGATAFWD 74 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCcccc---ccCc----CChHHHHHHHHHHHHHHHHhCCCCCc---eEEEECCchhHHHH
Confidence 45778888889999999874311100 0000 01234566677889999999985432 5777544 55 777
Q ss_pred HHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC
Q 023191 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA 205 (286)
Q Consensus 127 ~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n 205 (286)
+++.+++.+ +..++...+|.+.+....... ...+ +++.++.+ .+..++. .+.+ ++|+|.++ .+|
T Consensus 75 ~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~----~~~~-~~~~~~~~---~~~~~~~-----~~~~-~~~lV~~~h~et 139 (361)
T TIGR01366 75 AATFGLIEK-KSLHLSFGEFSSKFAKAVKLA----PWLG-EPIIVTAD---PGSAPEP-----QADP-GVDVIAWAHNET 139 (361)
T ss_pred HHHHhcccc-cccEEecCHHHHHHHHHHHhh----hccC-CceEEecC---CCCCCCC-----ccCC-CCCEEEEcccCC
Confidence 688888743 233333333332221111000 0011 23444432 2233333 2444 89999887 555
Q ss_pred -CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 206 -YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 206 -~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
+|...|+++| ++++|+++++|++|++|..+.++.. +|++++|+||+|++|.| ++++.++++.+..
T Consensus 140 ~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~-----~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~ 206 (361)
T TIGR01366 140 STGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE-----TDVYYFAPQKNFASDGGLWLAIMSPAALERI 206 (361)
T ss_pred ccceecccccc---cccCCCeEEEEcCccccCCCCCHHH-----CCEEEEEchhhcCCCCceEEEEECHHHHhhh
Confidence 8899999887 5899999999999999998877652 89999999999988877 7778888755433
No 264
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.56 E-value=9.1e-14 Score=124.70 Aligned_cols=165 Identities=21% Similarity=0.188 Sum_probs=117.6
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccccee
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (286)
++....|| +.++.+-|.+. .+.+.||..|+..++.+++++||+|++++..|++.+.-.- ....-.|.
T Consensus 62 nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~----~~l~~~gi 128 (396)
T COG0626 62 NPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFE----KILQKFGV 128 (396)
T ss_pred CccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHH----HHHHhcCe
Confidence 45566666 66777767654 5899999998887899999999999999976666543221 11222443
Q ss_pred eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCC
Q 023191 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (286)
Q Consensus 167 ~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (286)
++..+ + .-|.+++++++.+++||+|++. |+| +..+.|+++|+++|+++|+++++|++.+.+. ...
T Consensus 129 ~~~~~--d------~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~-----~q~ 195 (396)
T COG0626 129 EVTFV--D------PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPV-----LQR 195 (396)
T ss_pred EEEEE--C------CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccc-----ccC
Confidence 33222 2 1245566666663489999997 777 4488999999999999999999999965543 334
Q ss_pred CCC-cceEEEeCCCCCCCCCCc---eEEEEecc-hhhh
Q 023191 245 PFE-YADVVTTTTHKSLRGPRG---AMIFFRKG-VKEI 277 (286)
Q Consensus 245 ~~~-~~D~v~~s~~K~l~gp~g---G~l~~~~~-~~~~ 277 (286)
|++ |+|+++.|.+|.++|... |++.++++ +.+.
T Consensus 196 PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~ 233 (396)
T COG0626 196 PLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYEL 233 (396)
T ss_pred hhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHH
Confidence 555 699999999999988644 76665554 4343
No 265
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.55 E-value=3.1e-14 Score=119.96 Aligned_cols=196 Identities=19% Similarity=0.247 Sum_probs=138.6
Q ss_pred CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhc-CC
Q 023191 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL-KP 135 (286)
Q Consensus 57 ~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~-~~ 135 (286)
.|..+++++|.++... ..-|+......+|| ++.++++|-+. .++++||+.+|+++++.-+ .+
T Consensus 33 ~PTdeMr~am~eA~vg--------DdVyGeD~tt~rLE----~~vA~l~GKEA-----gLFv~SGTmgNllaIm~Hc~~r 95 (384)
T KOG1368|consen 33 VPTDEMRRAMAEASVG--------DDVYGEDPTTNRLE----QRVAELFGKEA-----GLFVPSGTMGNLLAIMVHCHQR 95 (384)
T ss_pred CChHHHHHHHhhcccC--------cccccCCccHHHHH----HHHHHHhCccc-----eeeecccccccHHHHHHHhcCC
Confidence 3678999999886643 12245556667777 77888899776 5899999998877777665 59
Q ss_pred CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcC-------CcEEEEc-CCC-C
Q 023191 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR-------PKLIVAG-ASA-Y 206 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~-------tk~v~i~-~~n-~ 206 (286)
|.+|++-+..|--.+..+- ...+.|..+ .++. +.+++.+|+++|++.+..++ |++|.+. .+| .
T Consensus 96 g~eii~gd~~HI~~~E~gg-----~s~l~gv~~--~tv~-~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~ 167 (384)
T KOG1368|consen 96 GSEIIVGDRAHIHRYEQGG-----ISQLAGVHV--RTVK-NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNC 167 (384)
T ss_pred CceEEeccchheeehhccC-----hhhhcccee--Eeee-eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecccccc
Confidence 9999988765543332221 134555433 4433 33678999999999997433 7899995 444 4
Q ss_pred C-CccCHH---HHHHHHHhcCCEEEEecccccccc-ccCCCCCCC-CcceEEEeCCCCCCCCCCceEEEEecchhhh
Q 023191 207 A-RLYDYE---RIRKVCNKQKAIMLADMAHISGLV-AAGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 207 g-~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~-~~~~~~~~~-~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (286)
| .+.|++ +|.++|++||+.++.|+|..+..- ..+.....+ ..+|.+..+++|.+++|-|.++.+++++.+-
T Consensus 168 Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~FI~k 244 (384)
T KOG1368|consen 168 GGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKDFIDK 244 (384)
T ss_pred CceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccHHHHHH
Confidence 5 666655 678889999999999999765432 223222111 2489999999999999999999999987653
No 266
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.51 E-value=6.7e-13 Score=125.75 Aligned_cols=173 Identities=17% Similarity=0.146 Sum_probs=115.2
Q ss_pred CcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh--cC--C-----C-------------------
Q 023191 86 GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK--P-----H------------------- 136 (286)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~--~~--~-----G------------------- 136 (286)
.++....+|+++.+++++++|.+. .| =.+|+|+| +|+.++.+- .. | +
T Consensus 117 ~SP~~t~lE~~vi~~la~l~G~~~-~~---G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~ 192 (608)
T TIGR03811 117 SSPATSQMEEEVGKEFATLMGYKN-GW---GHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTK 192 (608)
T ss_pred cCchHHHHHHHHHHHHHHHhCCCC-CC---eEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccc
Confidence 345678999999999999999975 33 33667777 777544322 10 0 0
Q ss_pred ------------------------C------eEEeccCCCCcccCccccccccccccceee---eEEEecccCCCCCCCC
Q 023191 137 ------------------------D------RIMALDLPHGGHLSHGYQTDTKKISAVSIF---FETMPYRLNESTGYID 183 (286)
Q Consensus 137 ------------------------d------~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~d 183 (286)
. .++++...|.++. +.+.+.|.. ++.+| ++ +++++|
T Consensus 193 ~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~--------KAa~ilGlG~~~vv~Vp--vD-~~~rmd 261 (608)
T TIGR03811 193 EIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWL--------KAADIIGIGLDQVIPVP--VD-SNYRMD 261 (608)
T ss_pred cccccccccccchhhhhhhccccccccccceEEEECCCccHHHH--------HHHHHcCCCcccEEEee--cC-CCCcCC
Confidence 0 3444443344332 245566653 45555 55 678999
Q ss_pred HHHHHHHhhhc---C-C-cEEEEc--CCCCCCccCHHHHHHHH---HhcCC--EEEEeccccccc--cccC----CC---
Q 023191 184 YDQLEKSATLF---R-P-KLIVAG--ASAYARLYDYERIRKVC---NKQKA--IMLADMAHISGL--VAAG----VI--- 242 (286)
Q Consensus 184 ~e~l~~~i~~~---~-t-k~v~i~--~~n~g~~~~l~~I~~ia---~~~~~--~vivD~a~~~g~--~~~~----~~--- 242 (286)
+++|++.|.+. + + -+|+.+ .+++|.+.|+++|+++| +++|+ |++||+|++.-. ...+ ..
T Consensus 262 ~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~ 341 (608)
T TIGR03811 262 INELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYD 341 (608)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccc
Confidence 99999988641 2 2 234433 55588999999999999 67887 699999965422 1111 00
Q ss_pred --------------------C------CCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 243 --------------------P------SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 243 --------------------~------~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
+ ..++.+|.++.++|||+..|.+ |++++|+.
T Consensus 342 ~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~ 399 (608)
T TIGR03811 342 DLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI 399 (608)
T ss_pred hhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH
Confidence 0 1245699999999999999999 99999875
No 267
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.51 E-value=2.1e-13 Score=121.17 Aligned_cols=157 Identities=17% Similarity=0.131 Sum_probs=116.2
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceee
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (286)
+..+.++ ..++.+.|... .+++.||.+|+..++..++++|++|+..+..|.+........ ....|+.
T Consensus 77 Pt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~----~~~~gie 143 (409)
T KOG0053|consen 77 PTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKF----LPKFGGE 143 (409)
T ss_pred CchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHH----HHHhCce
Confidence 3445555 77888888875 488899998777799999999999999998887765422211 1123322
Q ss_pred eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC
Q 023191 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (286)
Q Consensus 168 ~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (286)
...+ +. -|++++++++.+ ++++|++. |+| +..+.|+++|+++||++|++|++|++-+.+ ....+
T Consensus 144 ~~~v--d~------~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-----~~~~p 209 (409)
T KOG0053|consen 144 GDFV--DV------DDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-----YNQDP 209 (409)
T ss_pred eeee--ch------hhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-----cccCh
Confidence 2222 22 267888888988 99999997 777 558899999999999999999999994332 22334
Q ss_pred CC-cceEEEeCCCCCCCCCCc---eEEEEe
Q 023191 246 FE-YADVVTTTTHKSLRGPRG---AMIFFR 271 (286)
Q Consensus 246 ~~-~~D~v~~s~~K~l~gp~g---G~l~~~ 271 (286)
+. |||+++.|.+|+|+|... |.+..|
T Consensus 210 L~lGADIV~hSaTKyi~Ghsdvi~G~iv~n 239 (409)
T KOG0053|consen 210 LPLGADIVVHSATKYIGGHSDVIGGSVVLN 239 (409)
T ss_pred hhcCCCEEEEeeeeeecCCcceeeeEEecC
Confidence 44 499999999999998654 777776
No 268
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.50 E-value=6.1e-14 Score=118.02 Aligned_cols=205 Identities=20% Similarity=0.274 Sum_probs=149.1
Q ss_pred cCceecCCCC---CCCHHHHHHhccccccCCCCCCCCCcccCCcchH-HHHHHHHHHHHHHHCCCCCCCcceeEEeCCCh
Q 023191 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI-DMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (286)
Q Consensus 47 ~~i~L~~~e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~ 122 (286)
+.+|+..++- .-.|+++++-.+++.. |..|..+.++--+++.+ ..|| ..++++.+-+. .|+.-++.
T Consensus 68 ~ilnFcaNnYLGLsshPeii~a~~~alee-yGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypscf 137 (417)
T KOG1359|consen 68 KILNFCANNYLGLSSHPEIINAGQKALEE-YGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSCF 137 (417)
T ss_pred ceeeecccccccccCChHHHHHHHHHHHH-hCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEecccc
Confidence 4456554332 1378999999888876 66666666654444433 3455 77888877653 58888888
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh---hcCCcEE
Q 023191 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT---LFRPKLI 199 (286)
Q Consensus 123 ~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~---~~~tk~v 199 (286)
.||+.++.++++|.|.|+.....|.+... ++.+.. .-..+|+-+++..+. +++-|+|
T Consensus 138 dANag~feail~pedAvfSDeLNhASIId--------GirLck------------ry~h~dv~~l~~~l~~a~k~r~klv 197 (417)
T KOG1359|consen 138 DANAGAFEAILTPEDAVFSDELNHASIID--------GIRLCK------------RYRHVDVFDLEHCLISACKMRLKLV 197 (417)
T ss_pred ccchHHHHHhcChhhhhhccccccchhhh--------hhHHHh------------hhccchhHHHHHHHHHhhhheEEEE
Confidence 89999999999999999998888877754 222221 112456666665443 3355667
Q ss_pred EEc--CCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccC---CCC-CC-CCcceEEEeCCCCCCCCCCceEEEEec
Q 023191 200 VAG--ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG---VIP-SP-FEYADVVTTTTHKSLRGPRGAMIFFRK 272 (286)
Q Consensus 200 ~i~--~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~~~-~~-~~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (286)
+.. .+.-|...|+++|.+++++||.++++|++|+.|..... ... .. ...+|++..++.|.++|-.||+..+.+
T Consensus 198 ~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~ 277 (417)
T KOG1359|consen 198 VTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK 277 (417)
T ss_pred EecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh
Confidence 664 77788999999999999999999999999998766431 111 11 124899999999999999999999999
Q ss_pred chhhhhccC
Q 023191 273 GVKEINKQG 281 (286)
Q Consensus 273 ~~~~~~~~~ 281 (286)
++.+.+++.
T Consensus 278 ~li~llrqr 286 (417)
T KOG1359|consen 278 PLISLLRQR 286 (417)
T ss_pred hHHHHHHhc
Confidence 999888854
No 269
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.49 E-value=8.4e-13 Score=115.75 Aligned_cols=185 Identities=12% Similarity=0.075 Sum_probs=127.4
Q ss_pred ccCCcchHHHHHHHHHHHHHHHCCC--CCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccc
Q 023191 83 YYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK 159 (286)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~ 159 (286)
.|...++...+++++.+.+.+.-|- ..++ .++++++|++ ++..++.++.+|||..+++.|-|+++-...
T Consensus 116 ~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP--~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl------ 187 (471)
T KOG0256|consen 116 MFQDYHGLPSFRQAVAEFMERARGNRVKFDP--ERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDL------ 187 (471)
T ss_pred hcccccCchHHHHHHHHHHHHHhCCCCccCc--cceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccc------
Confidence 4566678899999999988887664 2233 4699999999 998788888999999999997777663321
Q ss_pred ccccceeeeEEEecccCC-CCCCCCHHHHHHHhhh-----cCCcEEEEc-CCC-CCCcc---CHHHHHHHHHhcCCEEEE
Q 023191 160 KISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL-----FRPKLIVAG-ASA-YARLY---DYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~-----~~tk~v~i~-~~n-~g~~~---~l~~I~~ia~~~~~~viv 228 (286)
-...|. +.+|+.+.. ++++++.+.+|++..+ .+.|.|++. |+| .|... .+..+..+|.++++-||+
T Consensus 188 -~~rTgv--eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~ 264 (471)
T KOG0256|consen 188 -RWRTGV--EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVIS 264 (471)
T ss_pred -eeccCc--eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEe
Confidence 123343 445544443 5679999999988753 256778775 888 66444 477788889999999999
Q ss_pred eccccccccccCCCC-------CC--CCcceEEEeCCCCCCCCC--CceEEEEecc-hhhhh
Q 023191 229 DMAHISGLVAAGVIP-------SP--FEYADVVTTTTHKSLRGP--RGAMIFFRKG-VKEIN 278 (286)
Q Consensus 229 D~a~~~g~~~~~~~~-------~~--~~~~D~v~~s~~K~l~gp--~gG~l~~~~~-~~~~~ 278 (286)
|+.++.......-+. .+ ....--++.|++|-|+=| +-|+|+..++ +..+.
T Consensus 265 DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA 326 (471)
T KOG0256|consen 265 DEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAA 326 (471)
T ss_pred ehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHH
Confidence 999554333221110 11 011235789999977554 3499999775 44443
No 270
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.48 E-value=3.5e-14 Score=124.64 Aligned_cols=205 Identities=15% Similarity=0.141 Sum_probs=44.9
Q ss_pred CCCCCCHHHHHHhccccccCCCCC-CCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh
Q 023191 54 SENFTSVSVMQAVGSVMTNKYSEG-YPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL 132 (286)
Q Consensus 54 ~e~~~~~~v~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~ 132 (286)
|-.+.++++.+++.+...+ |.+- |--. .+..+.+ ...+.+.++.++|++. .+++.+.+.|.++++.++
T Consensus 14 GRs~l~~~a~~a~~~~a~~-Y~nLE~dl~---~G~Rg~R--~~~v~~ll~~ltgAea-----A~VvNnnaAAv~L~l~~l 82 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASG-YSNLEYDLE---TGKRGSR--YAHVEELLCELTGAEA-----ALVVNNNAAAVLLALNTL 82 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccc-ccccccccc---ccccccc--cccccccccccccccc-----cccccccccccccccccc
Confidence 5557899999999887655 3111 1111 1111110 0114467788888865 255555665777555555
Q ss_pred cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE-EcCCCC---C-
Q 023191 133 LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV-AGASAY---A- 207 (286)
Q Consensus 133 ~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~-i~~~n~---g- 207 (286)
. +|.+|++..-+-...-.. |. ........|...+.+ ... ..-.+++++++|++ +|.+++ +.+||+ |
T Consensus 83 a-~~~EvIvsRGelVeiGgs-FR-ip~vm~~sGa~lvEV--Gtt---N~t~~~Dye~AI~e-~Ta~ll~Vh~Sn~~i~GF 153 (367)
T PF03841_consen 83 A-KGKEVIVSRGELVEIGGS-FR-IPDVMRQSGARLVEV--GTT---NRTHLSDYEKAITE-NTAALLKVHTSNFRIQGF 153 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-cccccccccccccccccc-cc-ccccccccccccccc--ccc---cccccccccccccc-cccccccccccccccccc
Confidence 4 577888776332211111 00 112334556555444 322 34567888999998 897764 457884 3
Q ss_pred -CccCHHHHHHHHHhcCCEEEEecccccccc-c---cCC------CCCCCCcceEEEeCCCCCCCCCCceEEEEecchhh
Q 023191 208 -RLYDYERIRKVCNKQKAIMLADMAHISGLV-A---AGV------IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 276 (286)
Q Consensus 208 -~~~~l~~I~~ia~~~~~~vivD~a~~~g~~-~---~~~------~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~ 276 (286)
...++++++++|++|++++++|.+. |.. + .++ ...--.|+|+++||+.|.|+||+.|+|++++++.+
T Consensus 154 t~~~~~~el~~la~~~~lp~i~Dlgs--G~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~ 231 (367)
T PF03841_consen 154 TGEVSLEELAELAKEHGLPVIVDLGS--GLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIE 231 (367)
T ss_dssp -------HHHHHHHHHT--EEEE-TT--HHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHH
T ss_pred cccccHHHHHHHHhhcCCcEEEECCC--CCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHH
Confidence 3558999999999999999999983 222 1 111 11111379999999999999999999999999998
Q ss_pred hhcc
Q 023191 277 INKQ 280 (286)
Q Consensus 277 ~~~~ 280 (286)
..|+
T Consensus 232 ~lk~ 235 (367)
T PF03841_consen 232 KLKK 235 (367)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 7764
No 271
>PLN02452 phosphoserine transaminase
Probab=99.45 E-value=1e-12 Score=118.37 Aligned_cols=205 Identities=15% Similarity=0.095 Sum_probs=131.0
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC-CChH-HH
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSP-SN 125 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~-sG~~-a~ 125 (286)
.++|++|...+|++|++++.+.+.+.-..|..--....-.+...++-+.+++.++++++++.+. .|++. .|++ ++
T Consensus 8 ~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y---~v~~l~Gsgt~~~ 84 (365)
T PLN02452 8 VFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY---EVLFLQGGASTQF 84 (365)
T ss_pred eEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc---eEEEEeCccHHHH
Confidence 5789999999999999999887654211121110001112345677778899999999985432 34443 4444 88
Q ss_pred HHHHHHhcCCCCeEEeccCCCCcccCccccccc--cccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 023191 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT--KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~ 203 (286)
.+++..++.+||++++.. .+....+ ..+...|...+............+|+++++. .+ +.+.|.++.
T Consensus 85 ea~~~nl~~~~~~~l~~~--------~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~~h 153 (365)
T PLN02452 85 AAIPLNLCKPGDKADFVV--------TGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TP-DAKFVHICA 153 (365)
T ss_pred HHHHHhcCCCCCeEEEEE--------CCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CC-CCcEEEECC
Confidence 889999999999999887 3333222 1233344322222101110112567777532 22 567777753
Q ss_pred CC--CCC-ccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 204 SA--YAR-LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 204 ~n--~g~-~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
++ +|. ..+++++. ++++++|+++++|..+.++..+. + .++|.||.+ ||.| |++++|+++.+..
T Consensus 154 nETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~---v--~~~saqK~l-GP~Gl~~v~vr~~~l~~~ 220 (365)
T PLN02452 154 NETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYG---V--IYAGAQKNV-GPSGVTIVIIRKDLIGNA 220 (365)
T ss_pred CCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcC---E--EEEeccccc-CCCCeEEEEEcHHHHhhc
Confidence 33 666 36777664 38999999999999888776655 4 447999988 6999 9999998876443
No 272
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.45 E-value=1.7e-12 Score=128.56 Aligned_cols=189 Identities=11% Similarity=0.046 Sum_probs=128.2
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCC--cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGG--NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~-~ 133 (286)
+|+.+.+++.+...- | ..|. -|.. +++.-+.-.+.+..+++++|++.+ ++.++.+++ +..++++++ +
T Consensus 117 ~P~~v~~~i~~~~~~-~-Tayt---PYqaEisQG~lqal~~~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 117 VPPVILRNILENPGW-Y-TQYT---PYQAEIAQGRLESLLNYQTMITDLTGLPMS----NASLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred CCHHHHHHHHhChHH-H-hhcC---CCchHHHHHHHHHHHHHHHHHHHHhCCChh----hEeecCChHHHHHHHHHHHhc
Confidence 678877777654321 1 0111 1222 244444555688999999999985 589989988 555466666 5
Q ss_pred CCC--CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCcc
Q 023191 134 KPH--DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARLY 210 (286)
Q Consensus 134 ~~G--d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n~g~~~ 210 (286)
.+| |+|++++.+|+++..++.. -++..|.+++.++++ + .+ ...+ .+..+++. |+++|.+.
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~t----~a~~~GieV~~v~~~---~---~~------~~~~-~v~~vlvq~P~~~G~v~ 250 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQT----RADGLGLEVVVADEK---D---FD------YSSG-DVCGVLVQYPATDGEVL 250 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHHH----hhhhcCCEEEEecch---h---hc------cccC-ceEEEEEecCCCCeEEc
Confidence 654 7899999999888765432 123356556555432 1 01 1122 34455566 55689999
Q ss_pred CHHHHHHHHHhcCCEEEEeccccccccccC-CCCCCCCcceEEEeCCCCCC-----CCCCceEEEEecchhh
Q 023191 211 DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFEYADVVTTTTHKSL-----RGPRGAMIFFRKGVKE 276 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~~~D~v~~s~~K~l-----~gp~gG~l~~~~~~~~ 276 (286)
|+++|+++||++|+++++ +++..+..... .... |+|++++++|||+ +||..|++++++++..
T Consensus 251 dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~---GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r 318 (993)
T PLN02414 251 DYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEW---GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKR 318 (993)
T ss_pred CHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhc---cCcEEEECCCccccCCCCCCCCeeEEEECHHHHh
Confidence 999999999999999999 88877766543 2222 5999999999998 7777799999998755
No 273
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.45 E-value=2e-12 Score=112.67 Aligned_cols=197 Identities=15% Similarity=0.189 Sum_probs=137.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc-CC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-KP 135 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~-~~ 135 (286)
.|..+++.....|..-. |..+ -|..++++.-+|+.+.+.+.+.=|.+.++ .+|..|+|++ ++..++..++ .+
T Consensus 87 fp~Dai~RA~~~L~~~g--Gs~G--aYS~SqGv~~vR~~VA~~I~rRDG~p~~p--~dI~LT~GAS~ai~~il~l~~~~~ 160 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCG--GSLG--AYSDSQGVPGVRKHVAEFIERRDGIPADP--EDIFLTTGASPAIRSILSLLIAGK 160 (475)
T ss_pred CCHHHHHHHHHHHHhcC--Cccc--ccccccCChhHHHHHHHHHHhccCCCCCH--HHeeecCCCcHHHHHHHHHHhcCC
Confidence 56666666666665422 2222 36777899999999999999998853333 4699999999 7775777664 57
Q ss_pred CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCC-CCCCCCHHHHHHHhhhc----CCcE-EEEcCCC-CC-
Q 023191 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF----RPKL-IVAGASA-YA- 207 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~d~e~l~~~i~~~----~tk~-v~i~~~n-~g- 207 (286)
.+-|+++- |-|++|...+...|... +++-+++ .+|.+|.++|++.+++. ++++ ++|+|-| +|
T Consensus 161 ~~GvliPi--------PQYPLYsAti~l~~~~~--v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGq 230 (475)
T KOG0258|consen 161 KTGVLIPI--------PQYPLYSATISLLGGTQ--VPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQ 230 (475)
T ss_pred CCceEeec--------CCCchhHHHHHHhCCcc--cceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccch
Confidence 88899999 77888877777777654 4444554 47899999999987652 4665 4557888 77
Q ss_pred --CccCHHHHHHHHHhcCCEEEEeccccccccccC--CCC---------CCCC-cce-EEEeCCCCCC---CCCCceEEE
Q 023191 208 --RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG--VIP---------SPFE-YAD-VVTTTTHKSL---RGPRGAMIF 269 (286)
Q Consensus 208 --~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~--~~~---------~~~~-~~D-~v~~s~~K~l---~gp~gG~l~ 269 (286)
+...+++|.++|.+.+++++.|+.+--.....+ ++. .+.. .+- +.+.|.||.+ +|++||++=
T Consensus 231 vls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 231 VLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYME 310 (475)
T ss_pred hhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeee
Confidence 345689999999999999999999554433322 100 1111 122 4467888876 778888864
Q ss_pred E
Q 023191 270 F 270 (286)
Q Consensus 270 ~ 270 (286)
.
T Consensus 311 v 311 (475)
T KOG0258|consen 311 S 311 (475)
T ss_pred c
Confidence 3
No 274
>PRK07505 hypothetical protein; Provisional
Probab=99.44 E-value=3.9e-12 Score=116.66 Aligned_cols=205 Identities=14% Similarity=0.103 Sum_probs=121.2
Q ss_pred CceecCCCCC---CCHHHHHHhccccccCCC-CCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 48 GLELIPSENF---TSVSVMQAVGSVMTNKYS-EGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 48 ~i~L~~~e~~---~~~~v~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+++...... .+|++++++.+.+.. +. .+...... ....+...++++.++++++. + .+++++|+.
T Consensus 48 ~ld~~s~~~lgl~~~p~v~~A~~~~l~~-~g~~~~~~~~~----~~~~~~~~~l~~~la~~~~~--~----~~~~~sG~~ 116 (402)
T PRK07505 48 FVNFVSCSYLGLDTHPAIIEGAVDALKR-TGSLHLSSSRT----RVRSQILKDLEEALSELFGA--S----VLTFTSCSA 116 (402)
T ss_pred EEEeecCCccCCCCCHHHHHHHHHHHHH-hCCCCCCccch----hhhhHHHHHHHHHHHHHhCC--C----EEEECChHH
Confidence 4666543222 389999999988864 31 11111111 11233445566888888887 2 388889988
Q ss_pred HHHHHHHHh----cCCCC-eEEecc-CCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCc
Q 023191 124 SNFQVYTAL----LKPHD-RIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (286)
Q Consensus 124 a~~~~l~a~----~~~Gd-~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk 197 (286)
++..++..+ ..+|+ .|++++ ..|++... .. .....+..++.+| . .|++++++++.+ +++
T Consensus 117 a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~-~~-----~~~~~~~~v~~~~--~------~d~~~l~~~~~~-~~~ 181 (402)
T PRK07505 117 AHLGILPLLASGHLTGGVPPHMVFDKNAHASLNI-LK-----GICADETEVETID--H------NDLDALEDICKT-NKT 181 (402)
T ss_pred HHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHh-hh-----hhhhcCCeEEEeC--C------CCHHHHHHHHhc-CCC
Confidence 776555432 23333 254544 44443211 01 1111122233332 2 389999998876 678
Q ss_pred EEEEc-CCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccc-cC--C--CCCC--CCcceEEEeCCCCCCCCCCceEE
Q 023191 198 LIVAG-ASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AG--V--IPSP--FEYADVVTTTTHKSLRGPRGAMI 268 (286)
Q Consensus 198 ~v~i~-~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~--~--~~~~--~~~~D~v~~s~~K~l~gp~gG~l 268 (286)
+++++ |.| +|...++++|.++|++|++++|+|++|+.+.+. .+ . .... .....+++.|+.|.++++ ||++
T Consensus 182 ~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~~ 260 (402)
T PRK07505 182 VAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGVI 260 (402)
T ss_pred EEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeEE
Confidence 88776 555 678889999999999999999999998653221 11 0 0111 112347788999998765 6887
Q ss_pred EE-ecchhhhhc
Q 023191 269 FF-RKGVKEINK 279 (286)
Q Consensus 269 ~~-~~~~~~~~~ 279 (286)
++ ++++.+..+
T Consensus 261 ~~~~~~~~~~~~ 272 (402)
T PRK07505 261 MLGDAEQIELIL 272 (402)
T ss_pred EeCCHHHHHHHH
Confidence 75 556665544
No 275
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.44 E-value=9.2e-13 Score=115.14 Aligned_cols=194 Identities=20% Similarity=0.210 Sum_probs=138.8
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCc-chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh--cCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGN-EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKP 135 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~--~~~ 135 (286)
.|+|++||.+.+.. |..|..+.+.-.+. ....+|| ..++++.+-+. .++|+|-.-|+-..+.++ .=|
T Consensus 187 Hp~V~~A~~~tl~~-hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~a-----ALlFsSCfVANDstLftLak~lp 256 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDR-HGAGAGGTRNISGHSKHHVRLE----AELADLHQKEA-----ALLFSSCFVANDSTLFTLAKKLP 256 (570)
T ss_pred ChHHHHHHHHHHHH-cCCCcCCccccCCCCchhhhHH----HHHHHHhcCcc-----eeeeeeeeeccchHHHHHHHHCC
Confidence 69999999999865 54455555554443 2234555 77888887665 377766555776666666 459
Q ss_pred CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc---CCcEEEEc--CCCCCCcc
Q 023191 136 HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIVAG--ASAYARLY 210 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~---~tk~v~i~--~~n~g~~~ 210 (286)
|.+|......|.+.+. +++-.+.. +.++ + .-|+++|++++... .||+|.+. .+..|.+.
T Consensus 257 gcei~SD~gNHASMI~--------GIrns~v~-K~IF-r------HND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc 320 (570)
T KOG1360|consen 257 GCEIFSDEGNHASMIQ--------GIRNSRVP-KHIF-R------HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC 320 (570)
T ss_pred CcEEeccccchHHHHH--------HhhhcCCc-ceee-c------cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcC
Confidence 9999988877777643 22222211 1111 2 23888898888652 47899885 66689999
Q ss_pred CHHHHHHHHHhcCCEEEEecccccccccc---CC--CCCCCCcceEEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 211 DYERIRKVCNKQKAIMLADMAHISGLVAA---GV--IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~--~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
|+++|.++|++||++.++|+.|+.|.+.. ++ .+.-+..+|++.+++.|.| |.-||+|.....+.|..+
T Consensus 321 pleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIAat~~LvDmiR 393 (570)
T KOG1360|consen 321 PLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIAATRKLVDMIR 393 (570)
T ss_pred CHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceehhhhhHHHHHH
Confidence 99999999999999999999999998753 22 2222235899999999988 568999999999988766
No 276
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.43 E-value=2.7e-12 Score=117.90 Aligned_cols=217 Identities=12% Similarity=0.122 Sum_probs=129.5
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.|++..+.+ ..+|.+++++.+.+.... .++.. .+..++...+.+.++++++.+.+ .|++++|
T Consensus 37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~------~~~~~~~~~l~~~l~~~~~~~~~----~v~~~~s 104 (413)
T cd00610 37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLT--HFSLG------FFYNEPAVELAELLLALTPEGLD----KVFFVNS 104 (413)
T ss_pred EEEEcCccHHhhccCCCCHHHHHHHHHHHHhCc--CccCc------ccCCHHHHHHHHHHHHhCCCCCC----EEEEcCc
Confidence 4566655422 257899999988875311 11111 01224455567889999986554 4888777
Q ss_pred hH-HHHHHHHHh--cCCCCeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCC---CCCCCCHHHHHHH
Q 023191 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNE---STGYIDYDQLEKS 190 (286)
Q Consensus 122 ~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~---~~~~~d~e~l~~~ 190 (286)
++ ++.+++..+ ..++++|+++++.|.+........ +..........+..+|++... ..+..|++++++.
T Consensus 105 gsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 184 (413)
T cd00610 105 GTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEA 184 (413)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHH
Confidence 77 888777766 478999999997777653211110 000001111112233322000 1234589999998
Q ss_pred hhh--cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCC--CCCCCC-cceEEEeCCCCC
Q 023191 191 ATL--FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV--IPSPFE-YADVVTTTTHKS 259 (286)
Q Consensus 191 i~~--~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~--~~~~~~-~~D~v~~s~~K~ 259 (286)
+.+ .+++++++++.+ .|...+ +++|.++|++||+++|+|++|. |....+. ....+. ..|++ +++|+
T Consensus 185 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~--t~sK~ 261 (413)
T cd00610 185 LEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIV--TLGKG 261 (413)
T ss_pred HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeE--EEccc
Confidence 875 256777776443 455555 9999999999999999999986 3211110 000011 25665 45599
Q ss_pred CCCCCc-eEEEEecchhhhh
Q 023191 260 LRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 260 l~gp~g-G~l~~~~~~~~~~ 278 (286)
++++.. |++++++++.+..
T Consensus 262 l~~g~~~g~~~~~~~~~~~~ 281 (413)
T cd00610 262 LGGGLPLGAVLGREEIMDAF 281 (413)
T ss_pred ccCccccEEEEEcHHHHHhh
Confidence 976544 8888888877764
No 277
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.42 E-value=1.6e-12 Score=124.41 Aligned_cols=162 Identities=15% Similarity=0.062 Sum_probs=118.1
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecc
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (286)
+..+..++.||++. ..++++|+| +|.+++++++.+||.||+.+.+|.|... ++.+.|+.++.++-.
T Consensus 199 eAe~~AA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~h--------aLilsga~PVYl~P~ 265 (714)
T PRK15400 199 EAEEYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTH--------LMMMSDVTPIYFRPT 265 (714)
T ss_pred HHHHHHHHHhCCCc-----EEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeEEEeccc
Confidence 35588999999987 488899999 9998999999999999999999988765 344677666554322
Q ss_pred cCCCC---CCCC-----HHHHHHHhhhc-CCc---EEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCC
Q 023191 175 LNEST---GYID-----YDQLEKSATLF-RPK---LIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 241 (286)
Q Consensus 175 ~~~~~---~~~d-----~e~l~~~i~~~-~tk---~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~ 241 (286)
.+ .. +.++ .+.+++.+.++ +.+ .++++.++ .|.+.++++|+++|+.++ +++|+||+........
T Consensus 266 rn-~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 266 RN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred cc-ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 22 11 1334 89999999762 223 67777555 789999999999999887 7999998765433332
Q ss_pred C--CCCCC-cc---e--EEEeCCCCCCCCCCc-eEEEEecc
Q 023191 242 I--PSPFE-YA---D--VVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 242 ~--~~~~~-~~---D--~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
. ...+. ++ | +++-|+||++++-.- ++|-++..
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~ 383 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD 383 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC
Confidence 2 23332 45 5 999999999988655 77666543
No 278
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=1.5e-12 Score=115.46 Aligned_cols=198 Identities=18% Similarity=0.153 Sum_probs=138.7
Q ss_pred CCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh
Q 023191 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL 132 (286)
Q Consensus 53 ~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~ 132 (286)
.+..+..+.+.+++..+-... -+.+...+ ..++-+++.+.+++++|++. .+++..|-..+...+.++
T Consensus 151 ~~~g~ca~~~~~~~~kygl~~-----css~~e~G---~~~~hkelE~l~A~f~g~e~-----a~vF~mGf~TNs~~~p~l 217 (519)
T KOG1357|consen 151 QSVGPCAEASLKSFDKYGLSR-----CSSRHEAG---TTEEHKELEELVARFLGVED-----AIVFSMGFATNSMNIPSL 217 (519)
T ss_pred ccCCcCChHHHHHHHHhcccc-----cccchhcc---cHHHHHHHHHHHHHhcCCcc-----eEEEeccccccccCccee
Confidence 344466788888876643221 11111111 12333344588999999875 489989977776688999
Q ss_pred cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh------cCC-----cEEEE
Q 023191 133 LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL------FRP-----KLIVA 201 (286)
Q Consensus 133 ~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~------~~t-----k~v~i 201 (286)
+.||..|+....+|.+... ++.+.|+..++.. .+ |+++||+.+++ .+| |++++
T Consensus 218 ~~~gsLIiSDelNHaSi~~--------GaRLSgAtiRVfk--HN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~ii 281 (519)
T KOG1357|consen 218 LGKGSLIISDELNHASLIT--------GARLSGATTRVFR--HN------DMQGLERLLRDAIVYGQPKTHRPWKKILIC 281 (519)
T ss_pred ecCCcceeeccccchheec--------cccccCceEEEEe--cC------CHHHHHHHHHHHHhcCCCCcCCcchheeee
Confidence 9999999999988888754 6778888777664 33 55666665543 122 34444
Q ss_pred --c-CCCCCCccCHHHHHHHHHhcCCEEEEecccccccccc-CC--CC-CCC--CcceEEEeCCCCCCCCCCceEEEEec
Q 023191 202 --G-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GV--IP-SPF--EYADVVTTTTHKSLRGPRGAMIFFRK 272 (286)
Q Consensus 202 --~-~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~--~~-~~~--~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (286)
. .+.-|.+..+.++.++++++.++++.|+||+.|+... +. -. +.. ..+|++++++.|+|+ -.||++.+++
T Consensus 282 vegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfg-a~GGyiagsk 360 (519)
T KOG1357|consen 282 VEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFG-AAGGYIAGSK 360 (519)
T ss_pred eccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcc-cccceecCcH
Confidence 2 5566788999999999999999999999999998842 21 11 111 248999999999775 4789999999
Q ss_pred chhhhhcc
Q 023191 273 GVKEINKQ 280 (286)
Q Consensus 273 ~~~~~~~~ 280 (286)
++.|+++.
T Consensus 361 ~lid~lrt 368 (519)
T KOG1357|consen 361 ELIDYLRT 368 (519)
T ss_pred HHHhhhcc
Confidence 99998873
No 279
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.41 E-value=3e-12 Score=122.44 Aligned_cols=160 Identities=17% Similarity=0.100 Sum_probs=116.1
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
..+..++.||++. ..++++|+| +|.+++++++.|||.||+.+.+|.|... ++.+.|+.++.++-..
T Consensus 200 Ae~~aA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~--------aLilsga~PVYl~P~~ 266 (713)
T PRK15399 200 AEEYIARTFGAEQ-----SYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAH--------LLMMSDVVPIWLKPTR 266 (713)
T ss_pred HHHHHHHHhCCCc-----EEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeeEEecccc
Confidence 5588899999986 488899999 9999999999999999999999988765 3446676655543122
Q ss_pred CCCC---CCCCH-----HHHHHHhhhc----CCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEE-EEeccccccccccCC
Q 023191 176 NEST---GYIDY-----DQLEKSATLF----RPKLIVAGASA-YARLYDYERIRKVCNKQKAIM-LADMAHISGLVAAGV 241 (286)
Q Consensus 176 ~~~~---~~~d~-----e~l~~~i~~~----~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~v-ivD~a~~~g~~~~~~ 241 (286)
+ .. +.++. +.+++.+.++ +|++++++.++ .|.+.++++|+++| |+.+ ++|+||+........
T Consensus 267 n-~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~ 342 (713)
T PRK15399 267 N-ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPI 342 (713)
T ss_pred c-ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcc
Confidence 2 11 23444 8999998752 23578887556 78999999999999 5655 699998865433222
Q ss_pred CC--CCCC---cceEE---EeCCCCCCCCCCc-eEEEEecc
Q 023191 242 IP--SPFE---YADVV---TTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 242 ~~--~~~~---~~D~v---~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
.+ ..+. ++|.+ +-|+||++++-.- ++|-++..
T Consensus 343 ~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~ 383 (713)
T PRK15399 343 YQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE 383 (713)
T ss_pred cCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC
Confidence 11 2221 36766 9999999988755 88887654
No 280
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.41 E-value=1.5e-12 Score=129.26 Aligned_cols=167 Identities=13% Similarity=0.039 Sum_probs=118.4
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-cCCC--CeEEeccCCCCcccCccccccccccc
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LKPH--DRIMALDLPHGGHLSHGYQTDTKKIS 162 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~-~~~G--d~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
+++.-+.-...+..++++.|++.. ++.+..+++ +..++++++ +.++ |+|++++..|+++..++.. -+.
T Consensus 116 sQG~Leal~~~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t----~a~ 187 (954)
T PRK05367 116 SQGRLEALLNFQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRT----RAE 187 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHH----HHH
Confidence 345555555688999999999884 588888888 555566666 5564 9999999999887654431 123
Q ss_pred cceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCC
Q 023191 163 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 241 (286)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~-~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~ 241 (286)
..|.+++.++. + + |++ .+ ++.++++. |+++|.+.|+++|+++||++|+++++|+.+.+.......
T Consensus 188 ~~G~ev~~~~~--~-~----d~~------~~-~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~p 253 (954)
T PRK05367 188 PLGIEVVVGDA--A-K----ALD------HD-DVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPP 253 (954)
T ss_pred hCCCEEEEecC--c-c----CCC------cc-cEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCCh
Confidence 45655666653 2 1 111 22 56666666 555888889999999999999999999977444333222
Q ss_pred CCCCCCcceEEEeCCCCC-----CCCCCceEEEEecchhhhh
Q 023191 242 IPSPFEYADVVTTTTHKS-----LRGPRGAMIFFRKGVKEIN 278 (286)
Q Consensus 242 ~~~~~~~~D~v~~s~~K~-----l~gp~gG~l~~~~~~~~~~ 278 (286)
... |+|++++++||| |+||..|++++++++.+.+
T Consensus 254 ge~---GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~l 292 (954)
T PRK05367 254 GEM---GADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSM 292 (954)
T ss_pred hhc---CCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhC
Confidence 222 599999999999 8888669999999876544
No 281
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=1.3e-11 Score=104.39 Aligned_cols=219 Identities=13% Similarity=0.127 Sum_probs=138.5
Q ss_pred HcCceecCCCCCCCHHHHHHhccccccCCCCC-CCCC-cccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH
Q 023191 46 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEG-YPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (286)
Q Consensus 46 ~~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~-~~~~-~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~ 123 (286)
.+.++|..|.+.--|++.+...+.....-.++ +... -.|.+.++.+.|-+++...+.+.+|.+-.. .+|.+|+|++
T Consensus 30 ~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQ 107 (417)
T COG3977 30 PGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQ 107 (417)
T ss_pred CCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCcc
Confidence 45688887777656666666544332211112 1111 236777888999999999999999996544 4899999999
Q ss_pred -HHHHHHHHh---cCCCC--eEEec-cCCCCcccCccccccccccccceeeeEE-Ee-cccCCC---CCCCCHHHHHHHh
Q 023191 124 -SNFQVYTAL---LKPHD--RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFET-MP-YRLNES---TGYIDYDQLEKSA 191 (286)
Q Consensus 124 -a~~~~l~a~---~~~Gd--~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~-v~-~~~~~~---~~~~d~e~l~~~i 191 (286)
+.+.++..| ...|+ +|+.+ .|+|-++-..+. -+..++. .| +...+. .+.+|.+++. +
T Consensus 108 s~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l---------~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i 176 (417)
T COG3977 108 SAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGL---------EEDLFVSAKPNIELLPAGQFKYHVDFEHLH--I 176 (417)
T ss_pred chHHHHHHHhcCccCCCcceeEeeccChhhcccccccc---------CccceeeccCCcccccccceeeccCHHHcc--c
Confidence 776566655 34554 45543 556655533221 1111111 11 011111 2478888884 5
Q ss_pred hhcCCcEEEEc-CCC-CCCc---cCHHHHHHHHHhcCCEEEEecccccccccc---CCCCCCCCcceEEEeCCCC-CCCC
Q 023191 192 TLFRPKLIVAG-ASA-YARL---YDYERIRKVCNKQKAIMLADMAHISGLVAA---GVIPSPFEYADVVTTTTHK-SLRG 262 (286)
Q Consensus 192 ~~~~tk~v~i~-~~n-~g~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~~~~~~~~D~v~~s~~K-~l~g 262 (286)
.+ ++.+|+++ |+| +|.+ .++.+|.++|++||+++++|.|++...-.. +..+ .|..--+.++|.+| .+.|
T Consensus 177 ~e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~-~w~~NiilC~SLSK~GLPG 254 (417)
T COG3977 177 GE-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATP-LWNENIILCMSLSKLGLPG 254 (417)
T ss_pred cc-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccc-cCCCCEEEEeehhhcCCCC
Confidence 55 89999998 888 7743 357788899999999999999977543222 2211 11124477999999 3455
Q ss_pred CCceEEEEecchhhhhc
Q 023191 263 PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 263 p~gG~l~~~~~~~~~~~ 279 (286)
-+-|++..+.++..+..
T Consensus 255 ~R~GIiIane~viqait 271 (417)
T COG3977 255 SRCGIIIANEKVIQAIT 271 (417)
T ss_pred cceeEEEccHHHHHHHH
Confidence 56699999998887766
No 282
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.39 E-value=1.9e-12 Score=119.50 Aligned_cols=164 Identities=23% Similarity=0.243 Sum_probs=124.8
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
..+..++.||.+. ..++++|++ ++..++++++.|||.||+....|.|... ++.++|+..+...-..
T Consensus 75 Aqe~aA~~fgAd~-----tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~--------glilaGa~Pvyl~p~~ 141 (557)
T COG1982 75 AQELAARVFGADH-----TYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHH--------GLILAGATPVYLEPSR 141 (557)
T ss_pred HHHHHHHHhCCCc-----eEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHH--------HHHHcCCceEEecCCC
Confidence 5588999999987 478889999 9999999999999999999999988764 3446665554433223
Q ss_pred CCC---CCCCCHHHHHHHhhhcC-C-cEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCC-C-C
Q 023191 176 NES---TGYIDYDQLEKSATLFR-P-KLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-F-E 247 (286)
Q Consensus 176 ~~~---~~~~d~e~l~~~i~~~~-t-k~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-~-~ 247 (286)
++. -+.++.+.+.+.+.+++ . |+++++.++ .|.+.++++|.++++..++||.+|++|.+..-..+..+.. . .
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred CccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhc
Confidence 321 14789999998776533 3 677777555 7899999999999999999999999988665544443332 2 3
Q ss_pred cceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 248 YADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 248 ~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
++|+++-|+||.+++-.- .+|-+++.
T Consensus 222 ~~~~~tqS~HK~l~alSQaS~iHv~~~ 248 (557)
T COG1982 222 GADFVTQSTHKLLAALSQASMIHVKDG 248 (557)
T ss_pred CceEEEechhhhhhhhhhhHHHhhCCC
Confidence 699999999999877543 88877763
No 283
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.38 E-value=1.9e-11 Score=112.01 Aligned_cols=196 Identities=14% Similarity=0.118 Sum_probs=117.0
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcC----
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK---- 134 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~---- 134 (286)
.|.+.+++.+.+.. +... .. .+ ..+...+++ +.++++++.+. .+.+.||+.|+.+++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~~~~--~~-~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAGR-LTLT--SR-AF-RNDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHhh-cccc--cc-cc-CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 78899999888765 2111 11 11 122333444 77777777542 36667777788877776632
Q ss_pred -----CC-CeEEeccCCCCcccCccccccccc-----cccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 023191 135 -----PH-DRIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG- 202 (286)
Q Consensus 135 -----~G-d~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~- 202 (286)
+| ++|++++..|.+........-... .......+..++ ..|++++++.+.+ ++++|+++
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~le~~i~~-~~~aii~e~ 195 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP--------FGDAEALEAAITP-NTVAFLVEP 195 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC--------CCCHHHHHHHhCC-CeEEEEEcc
Confidence 23 678888765554321111000000 000000111111 1489999999987 89999997
Q ss_pred CCC-CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCCCC-cceEEEeCCCCCCCCC--CceEEEEecc
Q 023191 203 ASA-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSLRGP--RGAMIFFRKG 273 (286)
Q Consensus 203 ~~n-~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~~~-~~D~v~~s~~K~l~gp--~gG~l~~~~~ 273 (286)
+.| +|...| +++|.++|++||+++|+|++|. +|............ ..|+++++ |+|+|. +.|+++++++
T Consensus 196 ~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~ 273 (401)
T PRK00854 196 IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSE 273 (401)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHH
Confidence 444 565554 9999999999999999999986 33221101000011 36887764 998654 4688999988
Q ss_pred hhhhhc
Q 023191 274 VKEINK 279 (286)
Q Consensus 274 ~~~~~~ 279 (286)
+.+..+
T Consensus 274 ~~~~l~ 279 (401)
T PRK00854 274 VLGVLK 279 (401)
T ss_pred HHhccc
Confidence 776655
No 284
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.36 E-value=1.1e-11 Score=112.57 Aligned_cols=204 Identities=14% Similarity=0.151 Sum_probs=121.5
Q ss_pred cCceecCC--CC---CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~--e~---~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.|++..+ .+ ..++.+.+++.+.+.... ... +.|. .+..+++.+++++++|.+. +++++|
T Consensus 28 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~-~~~~-----~~~~~~l~~~la~~~g~~~------~~~~~s 92 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV---HVS-NLYY-----TEPQEELAEKLVEHSGADR------VFFCNS 92 (379)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc---ccc-cccC-----CHHHHHHHHHHHhhCCCCE------EEEeCC
Confidence 45676553 22 346899999988776521 111 1111 2334456688888888753 666666
Q ss_pred hH-HHHHHHHHh---cC----CCCeEEeccCCCCcccCccccccccccccceeeeE----EEecccCCCCCC----CCHH
Q 023191 122 SP-SNFQVYTAL---LK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE----TMPYRLNESTGY----IDYD 185 (286)
Q Consensus 122 ~~-a~~~~l~a~---~~----~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~v~~~~~~~~~~----~d~e 185 (286)
++ ++.++++.+ .. +||+|+++++.|.++..-.. ..+.... ..+ .. .+.. .|++
T Consensus 93 g~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~--------~~~~~~~~~~~~~~--~~-~~~~~~~~~d~~ 161 (379)
T TIGR00707 93 GAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGAL--------SATGQPKYQKGFEP--LV-PGFSYAPYNDIE 161 (379)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHH--------HhcCChhhhccCCC--CC-CCceeeCCCCHH
Confidence 66 777666644 23 47999999976654421111 1111000 011 11 1111 1899
Q ss_pred HHHHHhhhcCCcEEEEcCCC-C-CCc-c---CHHHHHHHHHhcCCEEEEeccccccccccCC-CCC-CCC-cceEEEeCC
Q 023191 186 QLEKSATLFRPKLIVAGASA-Y-ARL-Y---DYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS-PFE-YADVVTTTT 256 (286)
Q Consensus 186 ~l~~~i~~~~tk~v~i~~~n-~-g~~-~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~-~~~-~~D~v~~s~ 256 (286)
++++.+++ ++++|++++.| . |.. . ++++|.++|+++++++|+|++|. +....+. ... ... ..|++ ++
T Consensus 162 ~l~~~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~--t~ 237 (379)
T TIGR00707 162 SLKKAIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDII--TL 237 (379)
T ss_pred HHHHHhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEE--EE
Confidence 99999987 89999997545 2 322 2 37899999999999999999985 3222111 000 011 24555 46
Q ss_pred CCCCCCC-CceEEEEecchhhhhcc
Q 023191 257 HKSLRGP-RGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 257 ~K~l~gp-~gG~l~~~~~~~~~~~~ 280 (286)
+|+++++ +.|+++.++++.+..++
T Consensus 238 sK~~~~G~riG~~~~~~~~~~~~~~ 262 (379)
T TIGR00707 238 AKGLGGGVPIGATLAKEEVAEAFTP 262 (379)
T ss_pred cccccCCcccEEEEEcHHHHhhhcC
Confidence 8998643 44999998887766654
No 285
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.36 E-value=1.1e-11 Score=111.98 Aligned_cols=199 Identities=13% Similarity=0.131 Sum_probs=128.9
Q ss_pred CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcC-C
Q 023191 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK-P 135 (286)
Q Consensus 57 ~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~-~ 135 (286)
.+++...++|.. . ...|++.+....|+ +.++++||.+. -+.+.+|..+...+++.+++ |
T Consensus 54 apS~~m~aAM~~--G---------DD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 54 AVTQSMQAAMMR--G---------DEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred CCCHHHHHHHHc--C---------CcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhcccc
Confidence 378888888874 1 12245566677777 77778889876 24455776677778888888 7
Q ss_pred CCeEEeccC----CCCcccCccccccccccccceeeeEEEecc------cC-CCCCCCCHHHHHHHhhhc---CCcEEEE
Q 023191 136 HDRIMALDL----PHGGHLSHGYQTDTKKISAVSIFFETMPYR------LN-ESTGYIDYDQLEKSATLF---RPKLIVA 201 (286)
Q Consensus 136 Gd~Vl~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------~~-~~~~~~d~e~l~~~i~~~---~tk~v~i 201 (286)
||++.+-.. .|..++..+. ..+.+.|..++.++.+ .+ +..+.+|+++|++.|+++ +.-.+..
T Consensus 114 g~e~g~~~~~~~v~hn~~fett~----g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~ 189 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFDTTQ----GHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVA 189 (467)
T ss_pred cccccccccccccceEEEEecch----HHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeee
Confidence 888885443 3333333211 1244566544443211 11 134789999999999852 2333333
Q ss_pred c-CCC--CCCcc---CHHHHHHHHHhcCCEEEEecccccc-cc--------ccCCCCCC-----CCcceEEEeCCCCCCC
Q 023191 202 G-ASA--YARLY---DYERIRKVCNKQKAIMLADMAHISG-LV--------AAGVIPSP-----FEYADVVTTTTHKSLR 261 (286)
Q Consensus 202 ~-~~n--~g~~~---~l~~I~~ia~~~~~~vivD~a~~~g-~~--------~~~~~~~~-----~~~~D~v~~s~~K~l~ 261 (286)
. .+| -|... .++++.++|++||+.++.|+|..+. +. ..+..... +.++|.+++|+.|.++
T Consensus 190 tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglg 269 (467)
T TIGR02617 190 TITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAM 269 (467)
T ss_pred eEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCC
Confidence 3 334 24444 4678899999999999999997663 32 12221111 2459999999999999
Q ss_pred CCCceEEEEecc-hhhhhc
Q 023191 262 GPRGAMIFFRKG-VKEINK 279 (286)
Q Consensus 262 gp~gG~l~~~~~-~~~~~~ 279 (286)
.|-||+|+++++ +.++.+
T Consensus 270 ApvGg~Lag~d~~~~~l~~ 288 (467)
T TIGR02617 270 VPMGGLLCFKDDSFFDVYT 288 (467)
T ss_pred CcccceEEecchhHHHHHH
Confidence 999999999986 444444
No 286
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.34 E-value=2.4e-11 Score=102.86 Aligned_cols=176 Identities=18% Similarity=0.208 Sum_probs=121.2
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCCeEEecc-CCCCcccCcc-ccc-cccccccce
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHG-YQT-DTKKISAVS 165 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~-~~~~~~~~~~-~~~-~~~~~~~~g 165 (286)
+.+.|+ +-+++.||.+..- +.+.+.||+.|+..++..+++|||+.+... ..|....... ..- ......-.|
T Consensus 66 GRdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfg 139 (416)
T COG4100 66 GRDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFG 139 (416)
T ss_pred chhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhC
Confidence 345555 8899999997755 678899999988889999999999998754 2222111000 000 001122344
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc----CCCCC--CccCHHHHHHHHHhc--CCEEEEecccccccc
Q 023191 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG----ASAYA--RLYDYERIRKVCNKQ--KAIMLADMAHISGLV 237 (286)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~----~~n~g--~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~ 237 (286)
..++.+++. .++.+|++.+.+.+++ +||+|.|. ...-+ .+.++++++++.++- +++++||.++ |.+
T Consensus 140 i~Y~~v~Lt---~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCY--GEF 213 (416)
T COG4100 140 IKYKAVPLT---ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCY--GEF 213 (416)
T ss_pred cceeecccc---cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccc--hhh
Confidence 556666644 4689999999999998 99999995 22222 455677777777765 7899999984 433
Q ss_pred ccCCCCCCCCcceEEEeCCCCCCCCC---CceEEEEecchhhh
Q 023191 238 AAGVIPSPFEYADVVTTTTHKSLRGP---RGAMIFFRKGVKEI 277 (286)
Q Consensus 238 ~~~~~~~~~~~~D~v~~s~~K~l~gp---~gG~l~~~~~~~~~ 277 (286)
.....+.. -|+|++.+|+-|.-+|. .||++.+|.++.+.
T Consensus 214 vE~~EPt~-vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~ 255 (416)
T COG4100 214 VEEKEPTH-VGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEA 255 (416)
T ss_pred hhccCccc-cchhhhccceeeCCCCceeeccceeechHHHHHh
Confidence 33333321 26999999999988774 56999999988754
No 287
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.34 E-value=5.2e-11 Score=109.03 Aligned_cols=198 Identities=14% Similarity=0.119 Sum_probs=116.6
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCC-
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH- 136 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~G- 136 (286)
+|.+.+++.+.+.... ... ..|.... . .++.++++++++.+.. ..|++++|++ ++.++++....+|
T Consensus 61 ~p~v~~ai~~~~~~~~---~~~-~~~~~~~-~----~~la~~l~~~~~~~~~---~~v~~~~sgsea~~~al~~~~~~g~ 128 (398)
T PRK03244 61 HPAVVEAVTRQLATLG---HVS-NLFATEP-Q----IALAERLVELLGAPEG---GRVFFCNSGAEANEAAFKLARLTGR 128 (398)
T ss_pred CHHHHHHHHHHHHhcc---Ccc-CccCCHH-H----HHHHHHHHHhCCCCCC---CEEEEeCchHHHHHHHHHHHHHHCC
Confidence 6899999988876521 111 1122211 1 2455788888875321 2588888777 8887887665566
Q ss_pred CeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC-C-CCCc
Q 023191 137 DRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS-A-YARL 209 (286)
Q Consensus 137 d~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~-n-~g~~ 209 (286)
+.|+..+..|.+........ +.......+..+..+| ..|++++++.+.+ ++++|++++. | +|..
T Consensus 129 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~~~~-~~~aviiep~~~~~G~~ 199 (398)
T PRK03244 129 TKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVP--------YGDVDALAAAVDD-DTAAVFLEPIQGEAGVV 199 (398)
T ss_pred CeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeC--------CCCHHHHHHhhcC-CeEEEEEecccCCCCCc
Confidence 56777766665542111000 0000000000111111 1378999998865 8899999733 4 5655
Q ss_pred cC----HHHHHHHHHhcCCEEEEeccccccccccCC-CCCCCC--cceEEEeCCCCCCCCCC-ceEEEEecchhhhhcc
Q 023191 210 YD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPFE--YADVVTTTTHKSLRGPR-GAMIFFRKGVKEINKQ 280 (286)
Q Consensus 210 ~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~~--~~D~v~~s~~K~l~gp~-gG~l~~~~~~~~~~~~ 280 (286)
.| +++|.++|++||+++|+|++|. |.-..+. ...... ..|+++ ++|+|++.- -|++++++++.+...+
T Consensus 200 ~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t--~sK~l~~G~~ig~~~~~~~~~~~~~~ 275 (398)
T PRK03244 200 PPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVT--LAKGLGGGLPIGACLAFGPAADLLTP 275 (398)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEE--EchhhhCCcccEEEEEcHHHHhhccC
Confidence 55 8899999999999999999985 3211110 000011 267664 469997543 3888888887776653
No 288
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.32 E-value=2.7e-11 Score=110.55 Aligned_cols=195 Identities=12% Similarity=0.078 Sum_probs=115.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh----
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL---- 132 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~---- 132 (286)
-.|.+.+++.+.+......+ . .+ ..+... ++.+++.+..+.+ .|++++|++ ++.+++++.
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~---~-~~-~~~~~~----~la~~l~~~~~~~------~v~~~~sGseA~~~al~~ar~~~ 112 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVS---N-LY-RIPEQE----RLAERLVENSFAD------KVFFTNSGAEAVECAIKTARRYH 112 (389)
T ss_pred CCHHHHHHHHHHHHhcCccc---c-cc-CChHHH----HHHHHHHhhCCCC------EEEEcCCcHHHHHHHHHHHHHHH
Confidence 47899999988776522111 1 11 112222 3446677666433 366666555 888777665
Q ss_pred cCCCC----eEEeccCCCCcccCccccccccccccceeeeEEE-ec-ccCCCCC----CCCHHHHHHHhhhcCCcEEEEc
Q 023191 133 LKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM-PY-RLNESTG----YIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 133 ~~~Gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~-~~~~~~~----~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
.++|| +|+++++.|+++....... .+ ..... .+ +.. +++ ..|++++++.+++ ++++|+++
T Consensus 113 ~~~G~~~r~~vi~~~~~yhg~~~~~~~~-------~~-~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~-~~~avive 182 (389)
T PRK01278 113 YGKGHPERYRIITFEGAFHGRTLATIAA-------GG-QEKYLEGFGPLV-PGFDQVPFGDIEALKAAITP-NTAAILIE 182 (389)
T ss_pred HhcCCCCCCEEEEECCCcCCCcHHHHhc-------cC-ChhhcccCCCCC-CCceEeCCCCHHHHHHhhCC-CeEEEEEe
Confidence 56777 8999997777664322111 01 00000 00 001 112 2589999999987 89999998
Q ss_pred CCC--CC-C---ccCHHHHHHHHHhcCCEEEEeccccccccccCC-CCC-CCC-cceEEEeCCCCCCC-CCCceEEEEec
Q 023191 203 ASA--YA-R---LYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS-PFE-YADVVTTTTHKSLR-GPRGAMIFFRK 272 (286)
Q Consensus 203 ~~n--~g-~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~-~~~-~~D~v~~s~~K~l~-gp~gG~l~~~~ 272 (286)
|.+ .| . ...+++|.++|++||+++|+|++|. |....+. ... ... ..|+ .+++|.++ |.+.|++++++
T Consensus 183 p~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi--~t~sK~l~~G~~ig~~~~~~ 259 (389)
T PRK01278 183 PIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDI--MAVAKGIGGGFPLGACLATE 259 (389)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCE--EEEehhccCCcceEEEEEcH
Confidence 555 33 2 2368999999999999999999986 3321111 110 011 1454 46789885 34568899988
Q ss_pred chhhhhcc
Q 023191 273 GVKEINKQ 280 (286)
Q Consensus 273 ~~~~~~~~ 280 (286)
++.+..++
T Consensus 260 ~~~~~~~~ 267 (389)
T PRK01278 260 EAAKGMTP 267 (389)
T ss_pred HHHhccCC
Confidence 87666543
No 289
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.30 E-value=4.7e-11 Score=106.81 Aligned_cols=206 Identities=13% Similarity=0.073 Sum_probs=128.2
Q ss_pred CceecCCCCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC-hH-HH
Q 023191 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SP-SN 125 (286)
Q Consensus 48 ~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG-~~-a~ 125 (286)
.+|+++|...+|++|++++.+.+.+....|.+--...-.+....++-+.+.+.++++++++.+. .|++..| ++ +.
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y---~Vlfl~GggT~~~ 81 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY---GVVFLQGGSSLQF 81 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC---eEEEEeccHHHHH
Confidence 5789999999999999999987766332221110000112345667777889999999995433 4655444 55 77
Q ss_pred HHHHHHhcCCCCeEE-eccCCCCcccCccccccccccccceeeeEEEecccC-CCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 023191 126 FQVYTALLKPHDRIM-ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRPKLIVAGA 203 (286)
Q Consensus 126 ~~~l~a~~~~Gd~Vl-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~d~e~l~~~i~~~~tk~v~i~~ 203 (286)
.++...++++||+++ +.. .+.++..+ ...+...| .+..+..... ..+..++++++ .+.+ +.+.|.++.
T Consensus 82 ea~~~Nll~~g~~~~~~~~---tG~fg~r~---~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~-d~~~v~~t~ 151 (364)
T PRK12462 82 SMIPMNFSRPGAAAPEYVT---TGYWSRKA---IGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDA-RAPFRHYVS 151 (364)
T ss_pred HHHHHHcCCCCCcEEEEEe---CCHHHHHH---HHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCC-CCcEEEEcc
Confidence 778899999999765 444 12221111 11222233 2333321111 01235666665 2233 567777763
Q ss_pred CC--CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhh
Q 023191 204 SA--YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (286)
Q Consensus 204 ~n--~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (286)
.+ +|...+ ++.+.++.++++|++..++..+.++.. .|++.++.+|.|+ |.| +++++++++.+.
T Consensus 152 NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~-----~dvi~agsQKnlg-P~Gltvvivs~~al~~ 217 (364)
T PRK12462 152 NETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEA-----YGMVYAHAQKNLG-PAGVTVAIIRRALLER 217 (364)
T ss_pred CCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHH-----ccEEEeeccccCC-CCceEEEEECHHHHhh
Confidence 33 665554 333446899999999888776655543 4899999999997 889 999999987543
No 290
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.26 E-value=5e-11 Score=99.07 Aligned_cols=165 Identities=18% Similarity=0.168 Sum_probs=117.7
Q ss_pred HHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCC-CeEEeccCCCCcccCccccccccccccceeeeEEEecccC
Q 023191 99 KRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (286)
Q Consensus 99 ~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (286)
..++.--++.++ +|.++.|+. .+-+++++.+.|| ++|+.+. |.|.+|.-.+.+.+.+++.+| .+
T Consensus 76 ~a~~~dkpLt~d----nic~GvGsDE~ID~iiR~~c~PGkeKIl~cP--------PtysMY~v~A~iNd~eVvkvp--l~ 141 (375)
T KOG0633|consen 76 DALAQDKPLTSD----NICVGVGSDELIDLIIRCVCDPGKEKILDCP--------PTYSMYVVDAAINDAEVVKVP--LN 141 (375)
T ss_pred hhcccCCCCCcc----ceEEecCcHHHHHHHHhheecCCccceeecC--------CcceeEEEEeecCCceEEEec--CC
Confidence 333333455664 599999999 7777999999999 8999999 788888777788887776665 44
Q ss_pred CCCCCCCHHHHHHHhhhc-CCcEEEEc-CCC-CCCccCHHHHHHHHHhc-CCEEEEeccccccccccCCCCCCC--Ccc-
Q 023191 177 ESTGYIDYDQLEKSATLF-RPKLIVAG-ASA-YARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPF--EYA- 249 (286)
Q Consensus 177 ~~~~~~d~e~l~~~i~~~-~tk~v~i~-~~n-~g~~~~l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~~--~~~- 249 (286)
.+|.+|.|++.+.+... ++|+++++ |.| +|.....+.|.++.+-- |.+|++|+|+. ..... ....++ .+-
T Consensus 142 -pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYi-dFsg~-~S~~~lV~kYpN 218 (375)
T KOG0633|consen 142 -PDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYI-DFSGV-ESRMKLVKKYPN 218 (375)
T ss_pred -CCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeE-eeccc-cccchHhHhCCc
Confidence 57999999999988653 68999998 555 66777777887777543 78999999943 22211 100111 112
Q ss_pred eEEEeCCCCCC--CCCCceEEEEecchhhhhcc
Q 023191 250 DVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 250 D~v~~s~~K~l--~gp~gG~l~~~~~~~~~~~~ 280 (286)
=++.-+++|.| .|-+-|+-++..++..++..
T Consensus 219 LivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~ 251 (375)
T KOG0633|consen 219 LIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNR 251 (375)
T ss_pred eeehhhhhhhcCcceeEeecccccHHHHHHHHh
Confidence 26677889976 45555998888888777653
No 291
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.26 E-value=6.3e-11 Score=106.91 Aligned_cols=167 Identities=10% Similarity=0.051 Sum_probs=112.9
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc-CCCCeEEeccCCCCcccCccccccccccccce
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~-~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (286)
+...++-+++.+.++++++.+.+. .-++++.+++ ++.+++..++ ++||+|++.. .++-.+ ....++..|
T Consensus 35 ~~F~~i~~e~~~~L~~l~~~~~~~--~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-----~FG~r~--~~eia~~~g 105 (374)
T TIGR01365 35 KLGKEKLAEAIKKTREMLGVPADY--LIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-----SFGKGW--VTDVTKQLK 105 (374)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCc--EEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-----HHHHHH--HHHHHHhcC
Confidence 445677778889999999985332 1234344455 8888999998 5899999753 222111 112333455
Q ss_pred e-eeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEE-cCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCC
Q 023191 166 I-FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (286)
Q Consensus 166 ~-~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i-~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~ 243 (286)
. .+..+. .. .+..+|+++++. +..+.+. +.+.+|...|+++|.+.+ +++++++|+..++|..+.+..
T Consensus 106 ~~~v~~l~--~~-~g~~~~~~~ve~-----~~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d- 174 (374)
T TIGR01365 106 LPDVRVLE--AE-YGKLPDLKKVDF-----KNDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH- 174 (374)
T ss_pred CCCcEEEc--CC-CCCCCCHHHcCC-----CCCEEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh-
Confidence 5 244443 22 445789998873 1223322 255588888987665322 589999999999988776554
Q ss_pred CCCCcceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 244 SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 244 ~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
++|+++++.+|+|++|.| +++.++++.....
T Consensus 175 ----~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~ 206 (374)
T TIGR01365 175 ----KLDVVTFSWQKVLGGEGAHGMLILSPRAVARL 206 (374)
T ss_pred ----HCcEEEEechhccCCCCceEEEEECHHHHHHH
Confidence 399999999999999999 9999998765443
No 292
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.23 E-value=3.5e-10 Score=103.59 Aligned_cols=198 Identities=16% Similarity=0.176 Sum_probs=115.5
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhc----
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~---- 133 (286)
.+|.+++++.+.+.. +. +....++ .+ ....+++.++++++.+. -++++||+.++..++....
T Consensus 48 ~~p~v~~a~~~~~~~-~~--~~~~~~~--~~----~~~~~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-LT--LTSRAFY--ND----VLGLAEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-cc--ccccccc--CH----HHHHHHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 489999999887754 21 1111111 12 33345577777776542 3666777778887777553
Q ss_pred ------CCCCeEEeccCCCCcccCcccccccc-ccc-cce---eeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 134 ------KPHDRIMALDLPHGGHLSHGYQTDTK-KIS-AVS---IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 134 ------~~Gd~Vl~~~~~~~~~~~~~~~~~~~-~~~-~~g---~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
..+++|+..+..|.+...-....... ... ..+ ..+..+ ...|++++++.+...++++|++.
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~d~~~le~~l~~~~~~~v~~e 185 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELV--------DYNDVEALEKLLQDPNVAAFIVE 185 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEe--------CCCCHHHHHHHhCCCCeEEEEEc
Confidence 13577888876555442111100000 000 000 001111 12389999999863378999987
Q ss_pred CC-C-CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCC--CCCCCcceEEEeCCCCCCCCCC--ceEEEEe
Q 023191 203 AS-A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVI--PSPFEYADVVTTTTHKSLRGPR--GAMIFFR 271 (286)
Q Consensus 203 ~~-n-~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~--~~~~~~~D~v~~s~~K~l~gp~--gG~l~~~ 271 (286)
+. | +|...+ +++|.++|++||+++|+|++|. .|....... ...+ ..|++++ .|+|+++. -|+++++
T Consensus 186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~--sK~l~~g~~~ig~v~~~ 262 (400)
T PTZ00125 186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLL--GKALSGGLYPISAVLAN 262 (400)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCC-CCCEEEE--cccccCCCcCcEEEEEc
Confidence 33 3 566665 9999999999999999999975 221110000 0110 2577765 49997653 4999999
Q ss_pred cchhhhhcc
Q 023191 272 KGVKEINKQ 280 (286)
Q Consensus 272 ~~~~~~~~~ 280 (286)
+++.+....
T Consensus 263 ~~~~~~~~~ 271 (400)
T PTZ00125 263 DDVMLVIKP 271 (400)
T ss_pred HHHHhhccC
Confidence 887776543
No 293
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.23 E-value=2.8e-10 Score=100.76 Aligned_cols=183 Identities=15% Similarity=0.217 Sum_probs=122.9
Q ss_pred ccCCcchHHHHHHHHHHHHHHHCCC-CCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccc
Q 023191 83 YYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 160 (286)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~ 160 (286)
.|+.+.+..+|...+++.....++. ...+| +|.+|+|.+ +...+++.++++||.|++-...|.+-+. .
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~--------s 164 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPYKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ--------S 164 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCCCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------h
Confidence 5788889998886665533323333 33444 799999999 8888999999999999998865555433 4
Q ss_pred cccceeeeEEEecccCCCCCCCCHHHHHHHhhh--------cCCcEEEE--cCCC-CCCccC---HHHHHHHHHhcCCEE
Q 023191 161 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--------FRPKLIVA--GASA-YARLYD---YERIRKVCNKQKAIM 226 (286)
Q Consensus 161 ~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--------~~tk~v~i--~~~n-~g~~~~---l~~I~~ia~~~~~~v 226 (286)
.+..| +..+|++.| ...+++|.|++.+.. .++++++. +..| +|...+ -++|.+||++|++++
T Consensus 165 ~~a~g--v~~ipv~md--~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLI 240 (472)
T KOG0634|consen 165 MEALG--VKIIPVKMD--QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLI 240 (472)
T ss_pred ccccC--ceEEecccc--CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEE
Confidence 45566 445665655 457899999998743 24667664 2555 664443 559999999999999
Q ss_pred EEecccccccccc-------------------CCCCCCC----CcceEEEeCCCCCC-CCCCceEEEEecc-hhhhhc
Q 023191 227 LADMAHISGLVAA-------------------GVIPSPF----EYADVVTTTTHKSL-RGPRGAMIFFRKG-VKEINK 279 (286)
Q Consensus 227 ivD~a~~~g~~~~-------------------~~~~~~~----~~~D~v~~s~~K~l-~gp~gG~l~~~~~-~~~~~~ 279 (286)
|.|+.++.-.... .+.+..+ +|.-+-..|++|-+ .|.|-|++.+++- +..++.
T Consensus 241 VeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~ 318 (472)
T KOG0634|consen 241 VEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILD 318 (472)
T ss_pred EecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhh
Confidence 9999977433220 0111121 13335588999955 3334499999884 445554
No 294
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.22 E-value=4.9e-10 Score=102.57 Aligned_cols=195 Identities=13% Similarity=0.166 Sum_probs=112.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhc----
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~---- 133 (286)
-.|.+.+++.+.+.... .... .+ ..+...+ +.++++++.+.+. .+++.||+.|+.+++....
T Consensus 57 ~~p~v~~ai~~~~~~~~---~~~~-~~-~~~~~~~----l~~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~ 122 (396)
T PRK04073 57 RHPKIIQALKDQADKVT---LTSR-AF-HSDQLGP----WYEKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAY 122 (396)
T ss_pred CCHHHHHHHHHHHhhcc---cccc-cc-CCHHHHH----HHHHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhh
Confidence 47899999988776521 1111 11 1122223 4477777766432 3556677778876666542
Q ss_pred -----CCC-CeEEeccCCCCcccCccccc-----cccc--cccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 023191 134 -----KPH-DRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (286)
Q Consensus 134 -----~~G-d~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~ 200 (286)
++| ++|+..+..|.+...-...+ +... ....+ +..++ -.|++++++.+.+ ++++|+
T Consensus 123 ~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------~~d~~~l~~~i~~-~~~~vi 191 (396)
T PRK04073 123 DVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPG--IKKIP--------YGDLEALKAAITP-NTAAFL 191 (396)
T ss_pred hccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCC--ceEeC--------CCCHHHHHHhccc-CeEEEE
Confidence 134 67888875555442111000 0000 00001 11111 1278999999876 899999
Q ss_pred EcCC-C-CCCccC----HHHHHHHHHhcCCEEEEeccccccccccC-CCCCCC-C-cceEEEeCCCCCCCCC--CceEEE
Q 023191 201 AGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPF-E-YADVVTTTTHKSLRGP--RGAMIF 269 (286)
Q Consensus 201 i~~~-n-~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~-~-~~D~v~~s~~K~l~gp--~gG~l~ 269 (286)
+++. | +|...+ +++|.++|++||+++|+|++|. |....+ ...... . ..|++++ +|.++++ +.|+++
T Consensus 192 iep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~~ 268 (396)
T PRK04073 192 VEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPISCVA 268 (396)
T ss_pred EcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcceEEE
Confidence 8844 4 565444 8999999999999999999987 221111 110011 1 2677664 6988664 459999
Q ss_pred Eecchhhhhcc
Q 023191 270 FRKGVKEINKQ 280 (286)
Q Consensus 270 ~~~~~~~~~~~ 280 (286)
+++++.+...+
T Consensus 269 ~~~~i~~~~~~ 279 (396)
T PRK04073 269 ANRDILGVFTP 279 (396)
T ss_pred EcHHHHhhhcC
Confidence 99888776654
No 295
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.19 E-value=2.2e-10 Score=104.69 Aligned_cols=195 Identities=13% Similarity=0.116 Sum_probs=116.1
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCC-
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH- 136 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~G- 136 (286)
.|.+.+++.+.+.... .... .+..+++.++.++++++.+.+ ++++++|++ ++.++++.+...+
T Consensus 57 ~p~v~~a~~~~~~~~~---~~~~------~~~~~~~~~la~~l~~~~~~~------~v~~~~gg~eA~~~al~~a~~~~~ 121 (396)
T PRK02627 57 HPKLVEAIQEQAAKLI---HTSN------LYYIEPQEELAEKLVELSGMD------KVFFCNSGAEANEAAIKLARKYGH 121 (396)
T ss_pred CHHHHHHHHHHHhhcc---cccc------ccCCHHHHHHHHHHHhhcCCC------EEEECCCcHHHHHHHHHHHHHHhc
Confidence 5889999988775421 1001 112355666778888887653 488888888 8887887664433
Q ss_pred ------CeEEeccCCCCcccCccccccccccccceeeeEEEe-cccCCCCC----CCCHHHHHHHhhhcCCcEEEEcCCC
Q 023191 137 ------DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP-YRLNESTG----YIDYDQLEKSATLFRPKLIVAGASA 205 (286)
Q Consensus 137 ------d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~~~~~~~----~~d~e~l~~~i~~~~tk~v~i~~~n 205 (286)
++|+++++.|.+....... ..+......+ .+.. ++. ..|++++++.+.+ ++++|++++.+
T Consensus 122 ~~~~~~~~ii~~~~~yhg~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~ 192 (396)
T PRK02627 122 KKGIEKPEIITAENSFHGRTLATLS-------ATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITD-KTAAVMLEPIQ 192 (396)
T ss_pred ccCCCCCeEEEECCCcCcccHHHHH-------hcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCC-CeEEEEEeccc
Confidence 6788888666544211110 0110000000 0111 111 2289999999976 89999997443
Q ss_pred --CC-Cc---cCHHHHHHHHHhcCCEEEEeccccccccccCC-CCC-CCC-cceEEEeCCCCCCCCC-CceEEEEecchh
Q 023191 206 --YA-RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS-PFE-YADVVTTTTHKSLRGP-RGAMIFFRKGVK 275 (286)
Q Consensus 206 --~g-~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~-~~~-~~D~v~~s~~K~l~gp-~gG~l~~~~~~~ 275 (286)
.| .. ..+++|.++|++||+++|+|++|. |....+. ... ... ..|++ +++|.+++. +.|++++++++.
T Consensus 193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~~~~G~rig~~~~~~~~~ 269 (396)
T PRK02627 193 GEGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIM--TLAKGLGGGVPIGAVLAKEKVA 269 (396)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEE--EEcchhhCCcccEEEEEcHHHH
Confidence 33 22 248899999999999999999976 3321111 110 111 24655 467988633 449999988877
Q ss_pred hhhcc
Q 023191 276 EINKQ 280 (286)
Q Consensus 276 ~~~~~ 280 (286)
+...+
T Consensus 270 ~~~~~ 274 (396)
T PRK02627 270 DVFTP 274 (396)
T ss_pred hccCC
Confidence 66654
No 296
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.17 E-value=7.6e-10 Score=102.19 Aligned_cols=207 Identities=15% Similarity=0.086 Sum_probs=121.7
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.+++..+-. ..+|.+.+++.+.+.+.. .| ...+....++. +.+++.+... + .|++++|
T Consensus 49 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~-----~~~~~~~~~la----e~l~~~~~~~-~----~v~~~~s 112 (423)
T TIGR00713 49 EYIDYVLSWGPLILGHAHPRVVEAVKEALERGT--SY-----GAPTEAEILLA----KEIISRVPSV-E----MVRFVNS 112 (423)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC--cC-----CCCCHHHHHHH----HHHHHhCCcc-c----EEEEeCC
Confidence 4466655432 358999999998886521 11 11223344444 6666665432 2 4777777
Q ss_pred hH-HHHHHHHHh--cCCCCeEEeccCCCCcccCcccc------------ccccccccceeeeEEEecccCCCCCCCCHHH
Q 023191 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQ------------TDTKKISAVSIFFETMPYRLNESTGYIDYDQ 186 (286)
Q Consensus 122 ~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~------------~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~ 186 (286)
++ ++.++++.. ...+++|+.+++.|.+....... .........+. ..+.++ ..|+++
T Consensus 113 GseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~d~~~ 184 (423)
T TIGR00713 113 GTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAK--LTLVLP------YNDLEA 184 (423)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCccccc--ceEEeC------CCCHHH
Confidence 66 887666643 34568999999877775321110 00000000000 011111 128999
Q ss_pred HHHHhhh--cCCcEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCC-CCCCC-cceEEEeCC
Q 023191 187 LEKSATL--FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSPFE-YADVVTTTT 256 (286)
Q Consensus 187 l~~~i~~--~~tk~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~~~-~~D~v~~s~ 256 (286)
+++.+.+ .++++|++. ++|.|...+ +++|.++|++||+++|+|++|. |....... ...+. ..|++ ++
T Consensus 185 l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~r~g~~~~~~~~~~~pDi~--t~ 261 (423)
T TIGR00713 185 LEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT-GFRVALGGAQEYFGVEPDLT--TL 261 (423)
T ss_pred HHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-ccccCcchhHHHhCCCcchh--hh
Confidence 9998873 267888884 666664444 7899999999999999999974 33221110 00011 25644 68
Q ss_pred CCCCCC-CCceEEEEecchhhhhcc
Q 023191 257 HKSLRG-PRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 257 ~K~l~g-p~gG~l~~~~~~~~~~~~ 280 (286)
.|.+++ .+.|++++++++.+..++
T Consensus 262 sK~l~~G~pig~v~~~~~i~~~~~~ 286 (423)
T TIGR00713 262 GKIIGGGLPVGAFGGRREIMERLAP 286 (423)
T ss_pred hhhhcCCCceeeeeEHHHHHHhhCc
Confidence 998853 456999999988877653
No 297
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.11 E-value=2.5e-09 Score=98.00 Aligned_cols=197 Identities=14% Similarity=0.150 Sum_probs=112.4
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh---c-
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL---L- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~---~- 133 (286)
-+|++.+++.+.+.+.+..+ . .+ .. ....++.++++++++.+. -.++.||+.++..+++.. .
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~---~-~~-~~----~~~~~la~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~ 117 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIG---N-GY-TN----EPVLRLAKKLVDATFADK-----VFFCNSGAEANEAALKLARRYAL 117 (397)
T ss_pred CCHHHHHHHHHHHHhccccc---C-cc-CC----HHHHHHHHHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 48999999988876522111 1 01 11 222335577777776432 355566777888766654 1
Q ss_pred ----CCCCeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 023191 134 ----KPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (286)
Q Consensus 134 ----~~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~ 204 (286)
...++|+..+..|.+...-.... ++....-....+..++ ..|++++++.+.+ ++++|+++|.
T Consensus 118 ~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~aavi~Epi 188 (397)
T TIGR03246 118 DKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP--------YNDLAAAKALISD-KTCAVIVEPI 188 (397)
T ss_pred hcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC--------CCCHHHHHHHhcc-CeEEEEEecc
Confidence 13456777775555442111100 0000000000011111 1389999999976 8999999855
Q ss_pred C-C-CC----ccCHHHHHHHHHhcCCEEEEeccccccccccCC-CC-CCCC-cceEEEeCCCCCCC-CCCceEEEEecch
Q 023191 205 A-Y-AR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLR-GPRGAMIFFRKGV 274 (286)
Q Consensus 205 n-~-g~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~-~~~~-~~D~v~~s~~K~l~-gp~gG~l~~~~~~ 274 (286)
+ . |. ...+++|.++|++||+++|+|++| .|.-..+. .. ..+. ..|++ ++.|.++ |.+.|++++++++
T Consensus 189 ~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lggG~pigav~~~~~i 265 (397)
T TIGR03246 189 QGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTTEI 265 (397)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE--EeehhhhCCcceeEEEEcHHH
Confidence 4 3 32 234999999999999999999998 44421111 00 0011 26766 5689884 4444888899888
Q ss_pred hhhhcc
Q 023191 275 KEINKQ 280 (286)
Q Consensus 275 ~~~~~~ 280 (286)
.+..+.
T Consensus 266 ~~~~~~ 271 (397)
T TIGR03246 266 AAHLKV 271 (397)
T ss_pred HHhccC
Confidence 777653
No 298
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.10 E-value=1.2e-09 Score=99.14 Aligned_cols=167 Identities=18% Similarity=0.193 Sum_probs=101.0
Q ss_pred cchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh---cCCCCeEEeccCCCCcccCccccccccccc
Q 023191 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKIS 162 (286)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~---~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
+++.-+.--+.+..++++.|.+. ++.-...|++ +..+++++. -+.+++|+++...|+.+..... . -+.
T Consensus 105 sQG~Lq~lfe~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~-t---~a~ 176 (429)
T PF02347_consen 105 SQGRLQALFEYQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLR-T---YAA 176 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHH-H---HCC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHH-H---hhh
Confidence 45555555568899999999986 3456666776 333333333 3345699999988887754221 1 123
Q ss_pred cceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCC
Q 023191 163 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 241 (286)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~ 241 (286)
..|.+++.++ .+ +++..| ++ ++.+|++..+| .|...++++|++++|++|.++++ .+ .......
T Consensus 177 ~~g~~iv~~~--~~-~~~~~d--------~~-~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~a---d~~aL~~ 240 (429)
T PF02347_consen 177 PLGIEIVEVP--LD-EDGTTD--------DD-DTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GA---DPNALGG 240 (429)
T ss_dssp HCCEEEEEE---BB-TTCSB---------ST-TEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CG---GCCGCCT
T ss_pred hCCeEEEEec--cc-ccCCcc--------cc-CeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ec---CHHHHhC
Confidence 4565555554 44 344555 44 89999998666 78888899999999999999887 44 3333344
Q ss_pred CCCCCC-cceEEEeCCCCCC------CCCCceEEEEecchhhhh
Q 023191 242 IPSPFE-YADVVTTTTHKSL------RGPRGAMIFFRKGVKEIN 278 (286)
Q Consensus 242 ~~~~~~-~~D~v~~s~~K~l------~gp~gG~l~~~~~~~~~~ 278 (286)
...|.+ |+|+++++ ||.| +||..|++.+++++...+
T Consensus 241 l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~l 283 (429)
T PF02347_consen 241 LKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQL 283 (429)
T ss_dssp C--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS
T ss_pred cCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhC
Confidence 445545 79999777 7755 666669999999977544
No 299
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.09 E-value=2.7e-09 Score=97.91 Aligned_cols=197 Identities=13% Similarity=0.124 Sum_probs=112.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh---c-
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL---L- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~---~- 133 (286)
-+|++.+++.+.+.+... . +. ....+... ++.+.+.++++.+. ..+++||+.++.+++... .
T Consensus 57 ~~p~v~~a~~~~~~~~~~--~-~~--~~~~~~~~----~l~~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~~ 122 (403)
T PRK05093 57 CHPALVKALKEQGEKLWH--I-SN--VFTNEPAL----RLAKKLIDATFAER-----VFFANSGAEANEAAFKLARRYAC 122 (403)
T ss_pred CCHHHHHHHHHHHHhcCc--c-cC--ccCCHHHH----HHHHHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHHh
Confidence 488999999888765221 1 11 11112222 35577777665432 355566766887666643 1
Q ss_pred ----CCCCeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 023191 134 ----KPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (286)
Q Consensus 134 ----~~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~ 204 (286)
...+.|+..+..|.+...-...+ +..+.......+..+ + ..|++++++.+.+ ++++|+++|.
T Consensus 123 ~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~l~~~l~~-~~aaiiiep~ 193 (403)
T PRK05093 123 DRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHV--P------FNDLAAVKAVIDD-HTCAVVVEPI 193 (403)
T ss_pred hcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEe--C------CCCHHHHHHHhcC-CeEEEEEecc
Confidence 23356777775555432111000 000000000011111 1 1288999998876 8999999865
Q ss_pred C-CCC-c----cCHHHHHHHHHhcCCEEEEeccccccccccCCC-CC-CCC-cceEEEeCCCCCCC-CCCceEEEEecch
Q 023191 205 A-YAR-L----YDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PS-PFE-YADVVTTTTHKSLR-GPRGAMIFFRKGV 274 (286)
Q Consensus 205 n-~g~-~----~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~-~~~-~~D~v~~s~~K~l~-gp~gG~l~~~~~~ 274 (286)
| ++. . ..+++|.++|++||+++|+|++|. |....+.. .. ... ..|+ .+++|.++ |.+.|++++++++
T Consensus 194 ~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi--~s~sK~l~~G~rig~vv~~~~i 270 (403)
T PRK05093 194 QGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDLFAYMHYGVTPDI--LTSAKALGGGFPIGAMLTTAEI 270 (403)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCCE--EEecccccCCcceEEEEEcHHH
Confidence 5 432 2 238999999999999999999976 44222211 10 011 1454 46789884 4456999999988
Q ss_pred hhhhcc
Q 023191 275 KEINKQ 280 (286)
Q Consensus 275 ~~~~~~ 280 (286)
.+..++
T Consensus 271 ~~~l~~ 276 (403)
T PRK05093 271 ASHFKV 276 (403)
T ss_pred HhhcCC
Confidence 777654
No 300
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.04 E-value=5.3e-09 Score=95.10 Aligned_cols=210 Identities=14% Similarity=0.129 Sum_probs=119.1
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.+++..+.. -.+|++.+++.+.+.+... . .. ....+++.++.+++.+.++.+. -+++.+|
T Consensus 30 ~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~------~~~~~~~~~la~~l~~~~~~~~-----~~~~~sG 95 (377)
T PRK02936 30 TYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH--V-SN------LFTNSLQEEVASLLAENSAGDL-----VFFCNSG 95 (377)
T ss_pred EEEECCcchhhccCCCCCHHHHHHHHHHHHhccc--c-cc------ccCCHHHHHHHHHHHhcCCCCE-----EEEeCCc
Confidence 3466655542 2579999999988865221 1 11 1123566666777777665432 2444566
Q ss_pred hHHHHHHHHHh-cCCC-CeEEeccCCCCcccCccccccccccccceeeeEEEecccCCC-CC--CCCHHHHHHHhhhcCC
Q 023191 122 SPSNFQVYTAL-LKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES-TG--YIDYDQLEKSATLFRP 196 (286)
Q Consensus 122 ~~a~~~~l~a~-~~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~--~~d~e~l~~~i~~~~t 196 (286)
+.++.+++... ..+| ++|++.+..|.+........-... .... ...+ ..++ .+ ..|++++++.+.+ ++
T Consensus 96 ~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~-~~~~---~~~~--~~~~~~~~~~~d~~~l~~~~~~-~~ 168 (377)
T PRK02936 96 AEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQE-KIKE---GFGP--LLPGFTHVPFNDIKALKEVMNE-EV 168 (377)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCc-cccc---cCCC--CCCCceEeCCCCHHHHHHhccC-Ce
Confidence 66888777643 2344 678888766654421111000000 0000 0001 0000 00 1278999999976 88
Q ss_pred cEEEEc-CCCC-CC----ccCHHHHHHHHHhcCCEEEEeccccccccccCCC-CC-CCC-cceEEEeCCCCCCCC-CCce
Q 023191 197 KLIVAG-ASAY-AR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PS-PFE-YADVVTTTTHKSLRG-PRGA 266 (286)
Q Consensus 197 k~v~i~-~~n~-g~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~-~~~-~~D~v~~s~~K~l~g-p~gG 266 (286)
++|++. ..+. |. ...+++|.++|++||+++|+|++|. |....+.. .. .+. ..|++ +++|.+++ .+.|
T Consensus 169 ~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig 245 (377)
T PRK02936 169 AAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVG 245 (377)
T ss_pred EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhhCCCCcEE--EEcccccCCCccE
Confidence 999986 3332 22 2349999999999999999999984 43221110 00 011 14654 57999863 3569
Q ss_pred EEEEecchhhhhcc
Q 023191 267 MIFFRKGVKEINKQ 280 (286)
Q Consensus 267 ~l~~~~~~~~~~~~ 280 (286)
++++++++.+....
T Consensus 246 ~v~~~~~~~~~~~~ 259 (377)
T PRK02936 246 AMIGKKELGTAFGP 259 (377)
T ss_pred EEEEcHHHHhhccC
Confidence 99999888777654
No 301
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.01 E-value=7.9e-10 Score=97.75 Aligned_cols=172 Identities=19% Similarity=0.180 Sum_probs=110.6
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh---cCCC----------CeEEecc-CCCCcccCc
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL---LKPH----------DRIMALD-LPHGGHLSH 152 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~---~~~G----------d~Vl~~~-~~~~~~~~~ 152 (286)
+....+|..+...+.+..|.+.+- +.|.. .|.+ +++.++.+- .-|+ +-|+..+ -.|.|...
T Consensus 137 PvF~lmE~~vl~km~~ivGw~~~~--DgIf~-pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k- 212 (510)
T KOG0629|consen 137 PVFVLMEEEVLAKMREIVGWEEGG--DGIFA-PGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKK- 212 (510)
T ss_pred ceEEeehHHHHHHHHHHhCCCCCC--Cceec-CCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHH-
Confidence 334456667778888889997642 24554 5555 666544433 1122 3344332 22222222
Q ss_pred cccccccccccce---eeeEEEecccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc-CCC-CCCccCHHHHHHHHHhc
Q 023191 153 GYQTDTKKISAVS---IFFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASA-YARLYDYERIRKVCNKQ 222 (286)
Q Consensus 153 ~~~~~~~~~~~~g---~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~-----tk~v~i~-~~n-~g~~~~l~~I~~ia~~~ 222 (286)
.+.+.| -.++.++ .+ +.+.+++++||+.|...+ |..|-.+ .+. .|...|++.|+++|++|
T Consensus 213 -------aAa~lg~gtd~c~~v~--t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~ 282 (510)
T KOG0629|consen 213 -------AAAFLGLGTDHCIKVK--TD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKH 282 (510)
T ss_pred -------HHHHhccCCceeEEec--cc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhc
Confidence 333444 2344453 45 678999999999986533 3333333 333 67889999999999999
Q ss_pred CCEEEEeccccccccccCCCCCCCC---cceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 223 KAIMLADMAHISGLVAAGVIPSPFE---YADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 223 ~~~vivD~a~~~g~~~~~~~~~~~~---~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
++|+++|+|++.|......+...+. -+|.+.+++||+++.|-- +.+++|.+
T Consensus 283 ~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~ 337 (510)
T KOG0629|consen 283 KLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE 337 (510)
T ss_pred CEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH
Confidence 9999999998877776544444443 489999999999999866 77666654
No 302
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.97 E-value=3.5e-09 Score=94.79 Aligned_cols=171 Identities=13% Similarity=0.182 Sum_probs=118.2
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh---c-C-CC---CeEEeccCCCCcccCccccccc
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL---L-K-PH---DRIMALDLPHGGHLSHGYQTDT 158 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~---~-~-~G---d~Vl~~~~~~~~~~~~~~~~~~ 158 (286)
+...+++.++..+++++|+.+.+. .=..|+|++ +.++....- . . .| .+++++...|.++ .
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~---~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~--------e 184 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDS---CGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAF--------E 184 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccc---cCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHH--------H
Confidence 346788999999999999997654 344467777 533232222 1 1 11 2344444333322 2
Q ss_pred cccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC--CCCccCHHHHHHHHHh-cCCEEEEecccccc
Q 023191 159 KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA--YARLYDYERIRKVCNK-QKAIMLADMAHISG 235 (286)
Q Consensus 159 ~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n--~g~~~~l~~I~~ia~~-~~~~vivD~a~~~g 235 (286)
..+...+.+++.+| +++.++.+|+..+.+.+++ +|.+++...+| +|...++++|.++.-| +++.+++|++- .|
T Consensus 185 K~a~yf~v~l~~V~--~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~-Gg 260 (491)
T KOG1383|consen 185 KAARYFEVELREVP--LDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACL-GG 260 (491)
T ss_pred HHHhhEEEEEEeee--ccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccC-cc
Confidence 23445666677676 4556799999999999999 99988887566 5688999999999988 99999999993 34
Q ss_pred ccc--c--CCCCCCC--CcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 236 LVA--A--GVIPSPF--EYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 236 ~~~--~--~~~~~~~--~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
.+. . ...++.| .++-.+..++||.-..|.| |+++.+++
T Consensus 261 Fi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k 305 (491)
T KOG1383|consen 261 FINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNK 305 (491)
T ss_pred ccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEccc
Confidence 333 1 1222333 2678999999998889999 88888753
No 303
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.97 E-value=1e-08 Score=94.94 Aligned_cols=175 Identities=17% Similarity=0.133 Sum_probs=125.4
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH---HHHHHHHHhc-CCC----CeEEeccCCCCcccCcccccccc
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP---SNFQVYTALL-KPH----DRIMALDLPHGGHLSHGYQTDTK 159 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~---a~~~~l~a~~-~~G----d~Vl~~~~~~~~~~~~~~~~~~~ 159 (286)
+++.++-..+.+++..+.|.|. ...+..||+. +-+.++++.+ ..| ...+++-..|+.+..
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA-------- 645 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA-------- 645 (1001)
T ss_pred hhHHHHHHHHHHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------
Confidence 5566777777799999999887 4688889988 4444777774 333 346777888888744
Q ss_pred ccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCCCC-CccCHHHHHHHHHhcCCEEEEecccccc
Q 023191 160 KISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASAYA-RLYDYERIRKVCNKQKAIMLADMAHISG 235 (286)
Q Consensus 160 ~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n~g-~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (286)
.+.++|.++ +|+..+ .++.+|+.+|++...++ +..++.++ ||.+| ....++++.++.|+||--|..|+|.--.
T Consensus 646 SA~Magmkv--vpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNA 722 (1001)
T KOG2040|consen 646 SAAMAGMKV--VPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNA 722 (1001)
T ss_pred hHHhcCCEE--EEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccc
Confidence 456777555 555666 67899999999988764 45677788 66678 4567999999999999999999995433
Q ss_pred ccccCCCCCCCCcceEEEeCCCCCCCC------CCceEEEEecchhhhhc
Q 023191 236 LVAAGVIPSPFEYADVVTTTTHKSLRG------PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 236 ~~~~~~~~~~~~~~D~v~~s~~K~l~g------p~gG~l~~~~~~~~~~~ 279 (286)
.+. +-..+.-|+|+.-.++||+|+- |..|-|.+++.+.+.+-
T Consensus 723 qVG--lc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP 770 (1001)
T KOG2040|consen 723 QVG--LCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP 770 (1001)
T ss_pred eec--ccCCccccccceeecccceeeecCCCCCCCCCccchhhhccccCC
Confidence 332 2222222699999999999833 33366877777766554
No 304
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.96 E-value=2.7e-08 Score=89.51 Aligned_cols=207 Identities=17% Similarity=0.129 Sum_probs=128.7
Q ss_pred cCceecCCCCC-----CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~~-----~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.|++..+-.+ -+|.|.+|+.+.+.+...-|.|. ++|-++.+.+.+++..- + .|.+++.
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~-e----~vrfvnS 117 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSI-E----KVRFVNS 117 (432)
T ss_pred EeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCcc-c----EEEEecc
Confidence 34555544444 27889999999988754323222 44555778888888762 2 2777665
Q ss_pred hH-HHHHHHHHh--cCCCCeEEeccCCCCcccCcccccccccc------ccce------eeeEEEecccCCCCCCCCHHH
Q 023191 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKI------SAVS------IFFETMPYRLNESTGYIDYDQ 186 (286)
Q Consensus 122 ~~-a~~~~l~a~--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~------~~~g------~~~~~v~~~~~~~~~~~d~e~ 186 (286)
.| |.+.+++.- ....|+|+.++-.|.++......-...++ ...| .....+| .+ |++.
T Consensus 118 GTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~--yN------D~~a 189 (432)
T COG0001 118 GTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP--YN------DLEA 189 (432)
T ss_pred hhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec--CC------CHHH
Confidence 55 887666544 55679999999888887643322111111 1111 0112222 22 8999
Q ss_pred HHHHhhhc--CCcEEEEc--CCCCCCcc----CHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEEeCCC
Q 023191 187 LEKSATLF--RPKLIVAG--ASAYARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTH 257 (286)
Q Consensus 187 l~~~i~~~--~tk~v~i~--~~n~g~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~~s~~ 257 (286)
+++++.+. +..+|++. ..|.|.+. -++.|.++|++||+++|.|+....--+..+-.+..+. ..|+ +++.
T Consensus 190 l~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDl--ttlG 267 (432)
T COG0001 190 LEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDL--TTLG 267 (432)
T ss_pred HHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcch--hhhh
Confidence 99999874 57788886 66666433 3889999999999999999995421111111111111 1454 4578
Q ss_pred CCCCCCCc-eEEEEecchhhhhc
Q 023191 258 KSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 258 K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
|.++|.-. |++.++.++.+...
T Consensus 268 KiIGGGlP~ga~gGr~eiM~~~~ 290 (432)
T COG0001 268 KIIGGGLPIGAFGGRAEIMEQLA 290 (432)
T ss_pred hhhcCCcceeeeccHHHHHhhhC
Confidence 98877655 99999998877544
No 305
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.95 E-value=8.6e-09 Score=94.71 Aligned_cols=201 Identities=16% Similarity=0.186 Sum_probs=112.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-.|++.+|+.+.+......+ . .+. .+.. .++.+.++++++.+ .+++ +||+.|+..+++...
T Consensus 56 ~~p~v~~A~~~~~~~~~~~~---~-~~~-~~~~----~~la~~l~~~~~~~------~v~~~~sGseA~e~Alk~ar~~~ 120 (406)
T PRK12381 56 AHPALREALNEQASKFWHTG---N-GYT-NEPV----LRLAKKLIDATFAD------RVFFCNSGAEANEAALKLARKYA 120 (406)
T ss_pred CCHHHHHHHHHHHhhccccc---C-ccC-CHHH----HHHHHHHHhhCCCC------eEEEcCCcHHHHHHHHHHHHHHH
Confidence 37899999988876422111 1 011 1222 23557777776543 2555 455558876666531
Q ss_pred -----CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC
Q 023191 134 -----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA 207 (286)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g 207 (286)
.++.+|+.++..|.+...-...+-... .... .+...+-.+. .....|++++++.+.+ ++++|++.|.+ .|
T Consensus 121 ~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~-~~~~-~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~aaviiEPv~~~g 196 (406)
T PRK12381 121 HDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQP-KYSQ-DFAPLPPDIR-HAAYNDLNSASALIDD-QTCAVIVEPIQGEG 196 (406)
T ss_pred hhcCCCCCCeEEEECCCcCCcchhHHhhcCCc-cccc-CCCCCCCCee-EeCCCCHHHHHHhccC-CeeEEEEeCCcCCC
Confidence 245788888877766532111000000 0000 0000000000 0112488999999976 88999997555 33
Q ss_pred -----CccCHHHHHHHHHhcCCEEEEeccccccccccCC-CCC-CCC-cceEEEeCCCCCCC-CCCceEEEEecchhhhh
Q 023191 208 -----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS-PFE-YADVVTTTTHKSLR-GPRGAMIFFRKGVKEIN 278 (286)
Q Consensus 208 -----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~-~~~-~~D~v~~s~~K~l~-gp~gG~l~~~~~~~~~~ 278 (286)
....+++|.++|++||+++|+|++| .|....+. ... .+. ..|+ .++.|.++ |.+.|++++++++.+..
T Consensus 197 g~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~gG~~ig~~~~~~~~~~~~ 273 (406)
T PRK12381 197 GVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDV--LTTAKALGGGFPIGAMLTTEKCASVM 273 (406)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCE--EEehhhhhCCCceEEEEEcHHHHhhc
Confidence 2345899999999999999999998 44322121 110 011 2565 47789984 44449999998887766
Q ss_pred cc
Q 023191 279 KQ 280 (286)
Q Consensus 279 ~~ 280 (286)
.+
T Consensus 274 ~~ 275 (406)
T PRK12381 274 TV 275 (406)
T ss_pred CC
Confidence 54
No 306
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=98.94 E-value=3.2e-08 Score=90.80 Aligned_cols=198 Identities=14% Similarity=0.150 Sum_probs=109.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhc----
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL---- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~---- 133 (286)
..|++.+++.+.+.. +... .. .+ ..+...+ +.+.++++++.+. -+++.||+.++..++....
T Consensus 54 ~~p~v~~a~~~~~~~-~~~~--~~-~~-~~~~~~~----l~~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-LTLS--SR-AF-YNDVFGE----FAEYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHHh-cccc--cc-cc-CCHHHHH----HHHHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 379999999887754 2111 11 11 1222333 4477777777532 3666777778887776531
Q ss_pred -----CC-CCeEEeccCCCCcc-cCccccccccccc-cce---eeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEE
Q 023191 134 -----KP-HDRIMALDLPHGGH-LSHGYQTDTKKIS-AVS---IFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIV 200 (286)
Q Consensus 134 -----~~-Gd~Vl~~~~~~~~~-~~~~~~~~~~~~~-~~g---~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~ 200 (286)
.+ .+.|+.....|.+. ............. ..+ ..+..+ + ..|++++++.+++. +..+|+
T Consensus 120 ~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~d~~~le~~l~~~~~~~~avi 191 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKI--P------YNNLEALEEALEDHGPNVCAFI 191 (401)
T ss_pred hhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEe--C------CCCHHHHHHHHHhcCCCEEEEE
Confidence 23 45666666665543 1111000000000 000 001111 1 12789999988632 456777
Q ss_pred Ec-CC-CCCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCC-CCC-CC-cceEEEeCCCCCCCCC--CceEEE
Q 023191 201 AG-AS-AYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSP-FE-YADVVTTTTHKSLRGP--RGAMIF 269 (286)
Q Consensus 201 i~-~~-n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~-~~-~~D~v~~s~~K~l~gp--~gG~l~ 269 (286)
+. .. +.|...+ +++|.++|++||+++|+|++|. |.-..+.. ... .. ..|+++++ |.++|. +-|+++
T Consensus 192 ~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~ 268 (401)
T TIGR01885 192 VEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-GLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVL 268 (401)
T ss_pred EeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEE
Confidence 76 22 2565554 9999999999999999999974 42211110 000 01 26777654 998663 347888
Q ss_pred Eecchhhhhcc
Q 023191 270 FRKGVKEINKQ 280 (286)
Q Consensus 270 ~~~~~~~~~~~ 280 (286)
.++++.+..++
T Consensus 269 ~~~~i~~~~~~ 279 (401)
T TIGR01885 269 ADDDVMLTIKP 279 (401)
T ss_pred EcHHHHhhccC
Confidence 88887766553
No 307
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.92 E-value=2.3e-08 Score=91.44 Aligned_cols=191 Identities=15% Similarity=0.133 Sum_probs=107.1
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhc-----
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALL----- 133 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~----- 133 (286)
.|++.+++.+.+.... .++. ....+.+.++.+++.+..+.+ . -+++.||+.|+.+++....
T Consensus 54 ~p~v~~a~~~q~~~~~-~~~~--------~~~~~~~~~la~~l~~~~~~~--~---v~f~~SGseA~e~Aik~ar~~~~~ 119 (395)
T PRK03715 54 NPGMVEALAAQAEKLI-NPSP--------AFYNEPMAKLAGLLTQHSCFD--K---VFFANSGAEANEGAIKLARKWGRK 119 (395)
T ss_pred CHHHHHHHHHHHHhcc-cccc--------cccCHHHHHHHHHHhhccCCC--E---EEEeCCcHHHHHHHHHHHHHHhhc
Confidence 6889999888765421 1111 111244555667776654332 2 2444555558887776553
Q ss_pred -CCC-CeEEeccCCCCcccCccccccccccccceee-eE--EEec--ccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 023191 134 -KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIF-FE--TMPY--RLNESTGYIDYDQLEKSATLFRPKLIVAGASA- 205 (286)
Q Consensus 134 -~~G-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~--~v~~--~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n- 205 (286)
++| .+|+..+..|.+...-.. .+.+.. .+ ..|. ... .....|++++++.+.+ ++++|++.|.+
T Consensus 120 ~~~~r~~ii~~~~~yHG~t~~~~-------~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~aavi~Epv~~ 190 (395)
T PRK03715 120 HKNGAYEIITFDHSFHGRTLATM-------SASGKPGWDTIFAPQVPGFP-KAELNDIASVEKLITD-KTVAVMLEPVQG 190 (395)
T ss_pred cCCCCcEEEEECCCcCCChHHHH-------hhcCCcccccCCCCCCCCce-eeCCchHHHHHHHcCC-CceEEEEeCCcC
Confidence 123 567777755544321111 011100 00 0000 000 0012478999998876 78888887443
Q ss_pred -CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCC----CCCCCCcceEEEeCCCCCCCCCC-ceEEEEecchh
Q 023191 206 -YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGPR-GAMIFFRKGVK 275 (286)
Q Consensus 206 -~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~v~~s~~K~l~gp~-gG~l~~~~~~~ 275 (286)
.|...+ +++|.++|++||+++|+|++|. |.-..+. ....+ ..|++++ .|.++|.. .|++++++++.
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv-~PDi~t~--gK~lg~G~p~~av~~~~~i~ 266 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGI-EPDIMTL--GKGIGGGVPLAALLAKAEVA 266 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCC-CCceeee--hhhhhCCcceEEEEEccccc
Confidence 344444 9999999999999999999987 4211111 11111 2687655 59997743 37778888775
Q ss_pred h
Q 023191 276 E 276 (286)
Q Consensus 276 ~ 276 (286)
.
T Consensus 267 ~ 267 (395)
T PRK03715 267 V 267 (395)
T ss_pred c
Confidence 3
No 308
>PLN02624 ornithine-delta-aminotransferase
Probab=98.92 E-value=5.8e-08 Score=90.88 Aligned_cols=195 Identities=17% Similarity=0.163 Sum_probs=107.5
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcC----
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLK---- 134 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~---- 134 (286)
.|.+.+++.+.+.. +. +... .+. .+...+ +.+.++++++.+. -++.+||+.++..++.....
T Consensus 93 ~p~v~~ai~~ql~~-~~--~~~~-~~~-~~~~~~----la~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~ 158 (474)
T PLN02624 93 HPKIIKALTEQAEK-LT--LSSR-AFY-NDKFPE----FAEYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE 158 (474)
T ss_pred CHHHHHHHHHHHHh-cC--Cccc-ccC-CHHHHH----HHHHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence 89999999888765 21 1111 111 222233 4577777776542 35556677677766642211
Q ss_pred -----CCC-eEEeccCCCCcccCccccc-----cccc--cccceeeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEE
Q 023191 135 -----PHD-RIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLI 199 (286)
Q Consensus 135 -----~Gd-~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v 199 (286)
++. .|+.....|.+...-...+ .... ....+ +..++ . .|++.+++.+.. .++++|
T Consensus 159 ~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~--~~~~~--~------~d~~~l~~~l~~~~~~iaai 228 (474)
T PLN02624 159 KKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPG--HLKVD--F------GDLDALEKIFEEDGDRIAAF 228 (474)
T ss_pred hcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCC--ceEeC--C------CCHHHHHHHHHhCCCCEEEE
Confidence 133 4665554444331100000 0000 00000 11111 1 278899988864 257788
Q ss_pred EEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccC-CCCCCCC--cceEEEeCCCCCCCCC--CceEE
Q 023191 200 VAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFE--YADVVTTTTHKSLRGP--RGAMI 268 (286)
Q Consensus 200 ~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~--~~D~v~~s~~K~l~gp--~gG~l 268 (286)
++.+.+ .|...| +++|.++|++||+++|+|++|. |.-..+ ....... ..|++++ .|.++++ +.|++
T Consensus 229 iiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~pigav 305 (474)
T PLN02624 229 LFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVIL--GKALGGGVIPVSAV 305 (474)
T ss_pred EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEe--cccccCCCCcceee
Confidence 887333 555555 9999999999999999999986 321111 1110001 2677775 5988765 44888
Q ss_pred EEecchhhhhcc
Q 023191 269 FFRKGVKEINKQ 280 (286)
Q Consensus 269 ~~~~~~~~~~~~ 280 (286)
++++++.+..++
T Consensus 306 ~~~~~i~~~~~~ 317 (474)
T PLN02624 306 LADKDVMLCIKP 317 (474)
T ss_pred eecHHHHhHhcc
Confidence 888877665543
No 309
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.89 E-value=1.4e-08 Score=100.08 Aligned_cols=165 Identities=13% Similarity=0.096 Sum_probs=110.4
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-c--CCCCeEEeccCCCCcccCcccccccccccc
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-L--KPHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~-~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
++.-+.--..+..++++.|.+.. |..+..+++ +..+++++. . +++++|++++..|+.+...... -+..
T Consensus 105 QG~Le~l~e~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t----~a~~ 176 (939)
T TIGR00461 105 QGRLEALLNFQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHT----RAKP 176 (939)
T ss_pred hHHHHHHHHHHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHH----HHHh
Confidence 44444444578999999999874 456666666 333344453 3 3458999999888776533221 1234
Q ss_pred ceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC
Q 023191 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 242 (286)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~ 242 (286)
.|.+++.+ |+++|++.+ ++.++++..+| +|.+.++++|++++|++|.+++++.-..+ ..+.
T Consensus 177 ~g~~v~~~-----------~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~a----l~ll 238 (939)
T TIGR00461 177 FGIEVIVV-----------DCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMA----LTLL 238 (939)
T ss_pred cCcEEEEE-----------cHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHH----hCCc
Confidence 45444333 445565554 46778887556 78888999999999999999999655332 2333
Q ss_pred CCCCC-cceEEEeCCCCC-----CCCCCceEEEEecchhhhh
Q 023191 243 PSPFE-YADVVTTTTHKS-----LRGPRGAMIFFRKGVKEIN 278 (286)
Q Consensus 243 ~~~~~-~~D~v~~s~~K~-----l~gp~gG~l~~~~~~~~~~ 278 (286)
..|-+ |+|+++++.+++ |+||..|++.+++++...+
T Consensus 239 ~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~l 280 (939)
T TIGR00461 239 TPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKM 280 (939)
T ss_pred CCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhC
Confidence 33433 699998888774 4688889999999876543
No 310
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.88 E-value=2.9e-08 Score=88.28 Aligned_cols=159 Identities=16% Similarity=0.194 Sum_probs=111.5
Q ss_pred HHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-cC--CCCeEEeccCCCCcccCccccccccccccceeeeEEE
Q 023191 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (286)
Q Consensus 96 ~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~-~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (286)
+.+..++++.|.+.. |--..-+++ +..+++++. +. +.++++++...|+.+...... -++-.|.++++.
T Consensus 124 efQtlv~dLTGm~VA----NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~T----ra~~~g~~i~~~ 195 (450)
T COG0403 124 EFQTLVADLTGLDVA----NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRT----RAEGLGIEIEVV 195 (450)
T ss_pred HHHHHHHHHhCCCcc----cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHh----hcccCceEEEEe
Confidence 467889999999873 455556666 444444544 33 368999999888877653321 122334434333
Q ss_pred ecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC-CccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-c
Q 023191 172 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YA-RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-Y 248 (286)
Q Consensus 172 ~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~ 248 (286)
+ .+ |++++++. .+..+.++++..+| +| ...++++|.+.+|+++.++++= ...+...+...|.+ |
T Consensus 196 ~--~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~----aDplaL~LL~pPGe~G 262 (450)
T COG0403 196 D--AD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVA----ADPLALGLLKPPGEFG 262 (450)
T ss_pred c--cc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEE----echhHhhccCCccccC
Confidence 2 22 78888887 44478899998777 77 5667999999999999987763 33444555555655 7
Q ss_pred ceEEEeCCCC-----CCCCCCceEEEEecchh
Q 023191 249 ADVVTTTTHK-----SLRGPRGAMIFFRKGVK 275 (286)
Q Consensus 249 ~D~v~~s~~K-----~l~gp~gG~l~~~~~~~ 275 (286)
+|+++++++- +|+||..|++.+++++.
T Consensus 263 ADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~ 294 (450)
T COG0403 263 ADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFK 294 (450)
T ss_pred CceEEecCcccCCCcCCCCcceeeeeEhHhHh
Confidence 9999999985 67889889999999874
No 311
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.88 E-value=6.5e-08 Score=85.34 Aligned_cols=214 Identities=19% Similarity=0.111 Sum_probs=111.5
Q ss_pred HcCceecCCCCCCCHHHHHHhccccc---cCC-CCCCCCCccc-CCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC
Q 023191 46 WKGLELIPSENFTSVSVMQAVGSVMT---NKY-SEGYPGARYY-GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120 (286)
Q Consensus 46 ~~~i~L~~~e~~~~~~v~~a~~~~l~---~~~-~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s 120 (286)
.+.++|+-.-..++++=.+--...+. ..+ ...-.+.+.| ++-+++++++ +.+++++|++++ +|++..
T Consensus 22 a~~L~LdmtRGKPs~eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r----~l~a~llgv~~~----~viv~g 93 (425)
T PF12897_consen 22 AKGLKLDMTRGKPSPEQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEAR----ELFAELLGVPPE----NVIVGG 93 (425)
T ss_dssp HTT--EES---S--HHHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHH----HHHHHHHTS-GG----GEEE-S
T ss_pred HcCCCcccCCCCCCHHHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHH----HHHHHHhCCCHH----HEEEec
Confidence 35677777777666654443322221 111 1122346788 8889998777 888889999986 488877
Q ss_pred ChHHHH-H--HHHHhc---C---------CCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHH
Q 023191 121 GSPSNF-Q--VYTALL---K---------PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 185 (286)
Q Consensus 121 G~~a~~-~--~l~a~~---~---------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e 185 (286)
.++.++ . +..+++ . +.=+.|++.|.|.-|+. .++..|.+.+.||+. ...+|+|
T Consensus 94 NSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa--------i~E~~Giemi~VpM~----~dGPDmD 161 (425)
T PF12897_consen 94 NSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA--------ITEHFGIEMIPVPMT----EDGPDMD 161 (425)
T ss_dssp S-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH--------HHHHCT-EEEEEEEE----TTEE-HH
T ss_pred cchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH--------HHHhhCcEEEecCCC----CCCCCHH
Confidence 777332 1 222321 1 12357888866666665 445677666666644 2368999
Q ss_pred HHHHHhhh-cCCcEEEE-c-CCC-CCCccCHHHHHHHH----HhcCCEEEEeccccccccccCCCCCC-C----------
Q 023191 186 QLEKSATL-FRPKLIVA-G-ASA-YARLYDYERIRKVC----NKQKAIMLADMAHISGLVAAGVIPSP-F---------- 246 (286)
Q Consensus 186 ~l~~~i~~-~~tk~v~i-~-~~n-~g~~~~l~~I~~ia----~~~~~~vivD~a~~~g~~~~~~~~~~-~---------- 246 (286)
.+++++.+ ...|.|+. . ++| +|....-+.+.++| ...+.-+++|.|++...+..+..... +
T Consensus 162 ~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG 241 (425)
T PF12897_consen 162 MVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG 241 (425)
T ss_dssp HHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT
T ss_pred HHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcC
Confidence 99999854 35688876 3 888 77776655555555 35699999999999887743221111 1
Q ss_pred -CcceEEEeCCCC-CCCCCCceEEEEecchhhhhc
Q 023191 247 -EYADVVTTTTHK-SLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 247 -~~~D~v~~s~~K-~l~gp~gG~l~~~~~~~~~~~ 279 (286)
...-+++.|++| +|.|-.-+++..+.+-.++.+
T Consensus 242 npdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~ 276 (425)
T PF12897_consen 242 NPDRVYVFASTSKITFPGAGVAFFAASEANLAWIK 276 (425)
T ss_dssp -TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHH
T ss_pred CCCeEEEEecccccccCCcceeeeecCHHHHHHHH
Confidence 113377999999 454433388888876554444
No 312
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.85 E-value=4.3e-08 Score=90.64 Aligned_cols=208 Identities=15% Similarity=0.120 Sum_probs=120.7
Q ss_pred cCceecCCCC-----CCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.+++..+.. ..+|.+.+++.+.+.+.. . ++...... ..+++++.+.+. ..+ .|.++++
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~-----~~~~~~~~----~~la~~L~~~~~-~~~----~v~~~~s 114 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--S-----FGAPTELE----VELAELVIELVP-SIE----MVRMVNS 114 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--c-----CCCCCHHH----HHHHHHHHHhCC-CCC----EEEEecC
Confidence 4567665532 358999999988886521 1 11222222 335577766653 222 3666666
Q ss_pred hH-HHHHHHHHhc--CCCCeEEeccCCCCcccCcccccc-c----cccccceeeeE-----EEecccCCCCCCCCHHHHH
Q 023191 122 SP-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTD-T----KKISAVSIFFE-----TMPYRLNESTGYIDYDQLE 188 (286)
Q Consensus 122 ~~-a~~~~l~a~~--~~Gd~Vl~~~~~~~~~~~~~~~~~-~----~~~~~~g~~~~-----~v~~~~~~~~~~~d~e~l~ 188 (286)
.+ |+..++.... ..+++|+..+..|.++........ . ......+...+ ..+++ ..|+++++
T Consensus 115 GseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~ 188 (426)
T PRK00062 115 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP------YNDLEAVE 188 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC------CCCHHHHH
Confidence 66 8887777653 346889999988877641111000 0 00000010000 01111 13789999
Q ss_pred HHhhh--cCCcEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCC-CCCCC-cceEEEeCCCC
Q 023191 189 KSATL--FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSPFE-YADVVTTTTHK 258 (286)
Q Consensus 189 ~~i~~--~~tk~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~~~-~~D~v~~s~~K 258 (286)
+.+.+ .++++|++. +++.|...+ +++|.++|++||+++|+|++|. |....+.. ...+. ..|+ .+++|
T Consensus 189 ~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi--~~~gK 265 (426)
T PRK00062 189 ELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDL--TTLGK 265 (426)
T ss_pred HHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcch--Hhhhh
Confidence 88853 256778886 556676666 8999999999999999999986 44221111 00011 1454 46689
Q ss_pred CCCC-CCceEEEEecchhhhhc
Q 023191 259 SLRG-PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 259 ~l~g-p~gG~l~~~~~~~~~~~ 279 (286)
.+++ .+.|++++++++.+..+
T Consensus 266 ~l~~G~p~ga~~~~~~i~~~~~ 287 (426)
T PRK00062 266 IIGGGLPVGAFGGRREIMEQLA 287 (426)
T ss_pred HhhCCCcceeeeEHHHHHHhhc
Confidence 8864 34577888888877665
No 313
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.85 E-value=1.4e-07 Score=85.30 Aligned_cols=191 Identities=12% Similarity=0.143 Sum_probs=108.2
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-cCCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPH 136 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~-~~~G 136 (286)
-.|++.+++.+.+.+... ... .+. .+ ....+.+++.++.+.+. -+...||+.|+.+++... ...|
T Consensus 41 ~~p~v~~ai~~ql~~~~~---~~~-~~~-~~----~~~~la~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~g 106 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVV---AGP-MFE-HE----EKEEMLEELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYTG 106 (364)
T ss_pred CCHHHHHHHHHHHHhcCC---ccC-CcC-CH----HHHHHHHHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHhC
Confidence 368888888887765221 111 111 12 22334566777766543 244455666777666654 3345
Q ss_pred -CeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-C-C-
Q 023191 137 -DRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-Y-A- 207 (286)
Q Consensus 137 -d~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~-g- 207 (286)
++|+.++..|.+........ ++....-.-..+..+| ..|++.+++.+.+ ++++|++.|-. . |
T Consensus 107 r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~--------~~d~~~l~~~i~~-~~aAvivEpi~g~gG~ 177 (364)
T PRK04013 107 RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP--------FNDVEAAKEAITK-ETAAVIFEPIQGEGGI 177 (364)
T ss_pred CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec--------CCCHHHHHHHhcC-CcEEEEEcCCcCCCCC
Confidence 89999887776653221110 0000000000011111 1278889998876 89999987433 2 3
Q ss_pred CccC---HHHHHHHHHhcCCEEEEeccccccccccCCCCC-CCC-cceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 208 RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFE-YADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 208 ~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~-~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
...| +++|.++|++||+++|.|++|. |......... .+. ..|++++ .|.++|.-. |.++.+.++
T Consensus 178 ~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~RtG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~~~~~~ 247 (364)
T PRK04013 178 VPAKEEFVKTLRDLTEDVGALLIADEVQS-GLRTGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTLTNFDV 247 (364)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEechhh-cCCCCchhHHHhcCCCCCEEEe--cccccCCceeEEEEecccc
Confidence 3344 9999999999999999999986 3322111110 011 2677766 898866433 777777664
No 314
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.77 E-value=9.7e-08 Score=86.81 Aligned_cols=197 Identities=12% Similarity=0.116 Sum_probs=107.5
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHh--cCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LKP 135 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~--~~~ 135 (286)
.|++++++.+.+.... .++. ....++++++.+.+. ...+. -+++ .||+.++..+++.. ..+
T Consensus 46 ~p~v~~a~~~~~~~~~--~~~~-------~~~~~~~~~la~~l~----~~~~~---~~~~~~SGseA~~~Al~~ar~~~~ 109 (375)
T PRK04260 46 HPQVQQALQKQAGLIW--HSPN-------LYLNSLQEEVAQKLI----GDKDY---LAFFCNSGAEANEAAIKIARKATG 109 (375)
T ss_pred CHHHHHHHHHHHHhcC--cccC-------ccCCHHHHHHHHHHh----cCcCC---EEEEcCccHHHHHHHHHHHHHhcC
Confidence 7889999988876422 1111 112234434444332 22221 2444 44555777666654 345
Q ss_pred CCeEEeccCCCCcccCccccc-cccc-cccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC--CCCccC
Q 023191 136 HDRIMALDLPHGGHLSHGYQT-DTKK-ISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA--YARLYD 211 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~-~~~~-~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n--~g~~~~ 211 (286)
+++|++.+..|.+........ .... ....+..+..++ . ....|++++++.+.+ ++++|++.+.+ .|...+
T Consensus 110 ~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~~~ 183 (375)
T PRK04260 110 KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFS--Y---AIFNDLNSVKALVNK-NTAAVMLELVQGESGVLPA 183 (375)
T ss_pred CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeE--E---eCCCCHHHHHHhcCC-CeEEEEECCeECCCCCcCC
Confidence 678888776655432111100 0000 000010000011 0 012489999998866 78888887333 444333
Q ss_pred ----HHHHHHHHHhcCCEEEEeccccccccccCC-CCC-CCC-cceEEEeCCCCCCC-CCCceEEEEecchhhhhcc
Q 023191 212 ----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPS-PFE-YADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 212 ----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~-~~~-~~D~v~~s~~K~l~-gp~gG~l~~~~~~~~~~~~ 280 (286)
+++|.++|+++|+++|+|++|. |....+. ... ... ..|++ +++|.|+ |-+.|++++++++.+...+
T Consensus 184 ~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~ 257 (375)
T PRK04260 184 DKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSSLGGAFGY 257 (375)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHHHHhhcCC
Confidence 8999999999999999999975 4322221 110 001 25644 7899996 3355999999887766554
No 315
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.76 E-value=2.6e-07 Score=85.45 Aligned_cols=212 Identities=14% Similarity=0.026 Sum_probs=109.0
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh--cCCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKPH 136 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~--~~~G 136 (286)
++.+.+++.+.+.+.. +.....+ ... ...++.+++.+..+.+..+ ..++.+||+.++..++... ....
T Consensus 59 ~~~i~~a~~~~~~~~~---~~~~~~~-~~~----~~~~la~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~r 128 (425)
T PRK08088 59 HPKVVAAVEAQLKKLS---HTCFQVL-AYE----PYLELCEKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATKR 128 (425)
T ss_pred CHHHHHHHHHHHhhCC---Ccccccc-CCH----HHHHHHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhCC
Confidence 7888888888776521 1100000 011 1223557777766643321 2467788888555444433 2334
Q ss_pred CeEEeccCCCCcccCccccc------cccccccceeeeEEEecccCCCCCCC--CHHHHHHHhh----hcCCcEEEEcCC
Q 023191 137 DRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLNESTGYI--DYDQLEKSAT----LFRPKLIVAGAS 204 (286)
Q Consensus 137 d~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~~~~~~~--d~e~l~~~i~----~~~tk~v~i~~~ 204 (286)
..|+..++.|.+...-.... +..+....-..+..++++.+..+... +++++++.+. ..+.++|++.|.
T Consensus 129 ~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi 208 (425)
T PRK08088 129 SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPV 208 (425)
T ss_pred CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcc
Confidence 45666676666553211110 00000000000111222222111111 1556888775 235677887633
Q ss_pred C-C-CCcc----CHHHHHHHHHhcCCEEEEeccccccccccC-CCCCCCCcceEEEeCCCCCCCC-CCceEEEEecchhh
Q 023191 205 A-Y-ARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFEYADVVTTTTHKSLRG-PRGAMIFFRKGVKE 276 (286)
Q Consensus 205 n-~-g~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~~~D~v~~s~~K~l~g-p~gG~l~~~~~~~~ 276 (286)
. . |... .+++|.++|++||+++|+|+++. |....+ .......+.+.-+.+++|.+++ .+.|+++++.++.+
T Consensus 209 ~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~ 287 (425)
T PRK08088 209 QGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMD 287 (425)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHh
Confidence 2 3 3333 38899999999999999999976 321111 1110001122225778998853 33499999988877
Q ss_pred hhccC
Q 023191 277 INKQG 281 (286)
Q Consensus 277 ~~~~~ 281 (286)
...+.
T Consensus 288 ~~~~~ 292 (425)
T PRK08088 288 AIAPG 292 (425)
T ss_pred hcCCC
Confidence 66543
No 316
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.76 E-value=1.3e-07 Score=84.33 Aligned_cols=207 Identities=12% Similarity=0.132 Sum_probs=117.5
Q ss_pred cCceecCCCCC-----CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC
Q 023191 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (286)
Q Consensus 47 ~~i~L~~~e~~-----~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG 121 (286)
+.|++..|-.. .+|.+++++.+-+...+..+ . ....+...++.+.+.+..+ ..+ .|++.++
T Consensus 43 ~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~s---n------~~~~~~~~~la~~L~~~s~-~~d----~vff~NS 108 (404)
T COG4992 43 EYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVS---N------LFYNEPQAELAEKLVELSP-FAD----RVFFCNS 108 (404)
T ss_pred EeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcc---c------ccCChHHHHHHHHHHhhCc-ccc----EEEEcCC
Confidence 45666655332 48999999988665544211 1 1122334446678888776 333 3777665
Q ss_pred hH-HHHHHHHHh---cC-C-CCeEEeccCCCCcccCcc-----ccccccccc-cceeeeEEEecccCCCCCCCCHHHHHH
Q 023191 122 SP-SNFQVYTAL---LK-P-HDRIMALDLPHGGHLSHG-----YQTDTKKIS-AVSIFFETMPYRLNESTGYIDYDQLEK 189 (286)
Q Consensus 122 ~~-a~~~~l~a~---~~-~-Gd~Vl~~~~~~~~~~~~~-----~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d~e~l~~ 189 (286)
.+ |+.+++..- .. | .-+|+.+...|.+..--. -+-|+.... +.. .++.+| . -|++++++
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~-g~~~vp--f------nDi~al~~ 179 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLP-GFRHVP--F------NDIEALEA 179 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCC-CceecC--C------CCHHHHHH
Confidence 55 888766544 22 2 236777765555432111 111221110 000 022222 1 28999999
Q ss_pred HhhhcCCcEEEEcCCC--CCC----ccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--cceEEEeCCCCCCC
Q 023191 190 SATLFRPKLIVAGASA--YAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLR 261 (286)
Q Consensus 190 ~i~~~~tk~v~i~~~n--~g~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~s~~K~l~ 261 (286)
++++ +|.+|++.|-. -|. ..-++++.++|++||+++|.|+.|..--....++..... ..|+++ .-|.++
T Consensus 180 ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~t--laK~Lg 256 (404)
T COG4992 180 AIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILT--LAKALG 256 (404)
T ss_pred Hhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEE--eecccc
Confidence 9999 99999996433 332 223889999999999999999999632121122111111 156654 569887
Q ss_pred CCCc-eEEEEecchhhhhc
Q 023191 262 GPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 262 gp~g-G~l~~~~~~~~~~~ 279 (286)
|.-. |.++.++.+.+...
T Consensus 257 GG~PigA~la~~~~~~~~~ 275 (404)
T COG4992 257 GGFPIGAMLATEEIASAFT 275 (404)
T ss_pred CCccceeeEEchhhhhcCC
Confidence 7544 77777755455443
No 317
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.73 E-value=1.7e-07 Score=86.64 Aligned_cols=206 Identities=13% Similarity=0.053 Sum_probs=110.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-.|++.+++.+.+.... +.....+. .+.+.++.+.+.+.+.-..+ .+.+ .||+.|+.++++...
T Consensus 59 ~~p~v~~ai~~q~~~~~---~~~~~~~~-----~~~~~~la~~l~~~~p~~~~----~v~f~~sGseA~e~A~klar~~~ 126 (423)
T PRK05964 59 NHPYIDQAIREQLDRLD---HVIFAGFT-----HEPAERLAQRLVALTPGGLD----HVFFSDSGSVAVEVALKMALQYW 126 (423)
T ss_pred CCHHHHHHHHHHHhhCC---CccccccC-----CHHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 36889999888776521 00000011 12333466777777642222 3555 555557776665431
Q ss_pred -----CCCCeEEeccCCCCcccCcccccccccc---ccce--eeeEEEecccCCCCCCCCHHHHHHHhhh--cCCcEEEE
Q 023191 134 -----KPHDRIMALDLPHGGHLSHGYQTDTKKI---SAVS--IFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVA 201 (286)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~---~~~g--~~~~~v~~~~~~~~~~~d~e~l~~~i~~--~~tk~v~i 201 (286)
....+|+.....|.+............. .+.+ .....++++.+ +....+++++++.+.+ .++.+|++
T Consensus 127 ~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~ 205 (423)
T PRK05964 127 RNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIV 205 (423)
T ss_pred HhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 2346788888777665321111100000 0000 01222333321 1112237888888853 24567777
Q ss_pred cC--CC-CCC----ccCHHHHHHHHHhcCCEEEEeccccccccccC-CCC-CCCC-cceEEEeCCCCCCCCC--CceEEE
Q 023191 202 GA--SA-YAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIP-SPFE-YADVVTTTTHKSLRGP--RGAMIF 269 (286)
Q Consensus 202 ~~--~n-~g~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~-~~~~-~~D~v~~s~~K~l~gp--~gG~l~ 269 (286)
.| .. .|. ...+++|.++|++||+++|+|++|. |....+ ... .... ..|++++ .|+|+|+ +.|+++
T Consensus 206 Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~~a~~~~~v~pDi~~~--~K~l~gG~~p~~av~ 282 (423)
T PRK05964 206 EPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT-GFGRTGTLFACEQAGVSPDIMCL--SKGLTGGYLPLAATL 282 (423)
T ss_pred ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhHHHhcCCCCCeeee--ehhhhcCcccceEEE
Confidence 65 23 332 2348999999999999999999984 321111 100 0011 2677654 5999776 238889
Q ss_pred Eecchhhhhc
Q 023191 270 FRKGVKEINK 279 (286)
Q Consensus 270 ~~~~~~~~~~ 279 (286)
+++++.+...
T Consensus 283 ~~~~i~~~~~ 292 (423)
T PRK05964 283 CTAEIFEAFY 292 (423)
T ss_pred EcHHHHHhhh
Confidence 9988877654
No 318
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.72 E-value=4.3e-07 Score=84.07 Aligned_cols=198 Identities=13% Similarity=0.040 Sum_probs=108.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHh---c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL---L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~---~ 133 (286)
-.|.|.+++.+.+.+... .. . +.. .+.+..+.+++.+.+....+ .+.+ .||+.|+.++++.. .
T Consensus 92 ~hp~v~~Av~~ql~~l~~---~~-~-~~~----~~~~~~lAe~L~~~~p~~~~----~v~f~~SGsEA~e~AlklAr~~t 158 (442)
T TIGR03372 92 RNPNVIAAVENQLAKQPL---HS-Q-ELL----DPLRALLAKTLAALTPGKLK----YSFFCNSGTESVEAALKLAKAYQ 158 (442)
T ss_pred CCHHHHHHHHHHHHhCCC---cc-c-ccC----CHHHHHHHHHHHHhCCCCcC----EEEEeCCchHHHHHHHHHHHHHH
Confidence 478999999887765221 11 1 111 12333466777777643322 2555 55666777655533 1
Q ss_pred --CCCCeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh-----cCCcEEEE
Q 023191 134 --KPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVA 201 (286)
Q Consensus 134 --~~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-----~~tk~v~i 201 (286)
+...+|+.....|.+...-.... ++....-....+..+| -.|.+++++.+.. .++.+|++
T Consensus 159 ~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p--------~~d~~~~~~~l~~~~~~~~~vAavIv 230 (442)
T TIGR03372 159 SPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVA--------FGDIEAMLKALNECKKTGDDVAAIIL 230 (442)
T ss_pred hhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeC--------CCCHHHHHHHHHHHhcCCCcEEEEEE
Confidence 13467888887666553111100 0000000000011122 1267777776642 25677777
Q ss_pred c--CCCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccC--CCCCCCCcceEEEeCCCCCCCCC--CceEEEE
Q 023191 202 G--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP--RGAMIFF 270 (286)
Q Consensus 202 ~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~l~gp--~gG~l~~ 270 (286)
. .++-|...| ++++.++|++||+++|+|++|. +|-.... .....+ ..|+++ +.|.++|. +.|++++
T Consensus 231 Epv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt--~gK~lg~G~~Pigavv~ 307 (442)
T TIGR03372 231 EPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV-QPDILC--LAKALGGGVMPIGATIA 307 (442)
T ss_pred eCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC-CCCeee--ehhhhcCCcccceEEEe
Confidence 6 333455555 9999999999999999999984 3322111 011111 268776 68999764 2466777
Q ss_pred ecchhhhhc
Q 023191 271 RKGVKEINK 279 (286)
Q Consensus 271 ~~~~~~~~~ 279 (286)
++++.+...
T Consensus 308 ~~~i~~~~~ 316 (442)
T TIGR03372 308 TEAVFSVLF 316 (442)
T ss_pred cHHHHHhhh
Confidence 888776653
No 319
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.70 E-value=1.8e-07 Score=82.28 Aligned_cols=187 Identities=19% Similarity=0.195 Sum_probs=123.0
Q ss_pred CHHHHHHhccccccCCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHhcCCCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHD 137 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~~~~Gd 137 (286)
.+++.+.....+.+ |.-|.-+.+ +|+.-+-.-.+| +++++++|++. .|+..-|.+++..++.++.+.||
T Consensus 110 ~~~ike~a~~~lrk-yGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~-----aivYs~gF~ti~S~ipafsKrGD 179 (467)
T KOG1358|consen 110 NEEIKEEASFTLRK-YGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTED-----AIVYSYGFSTIESAIPAFSKRGD 179 (467)
T ss_pred cHHHHHHHHHHHHH-hCCCCcCCCcccccceeecccH----HHHHHhhCCcc-----eeeeccccchhhhcchhhhccCc
Confidence 78888888877766 544433333 455444334555 88999999975 48888898855558999999999
Q ss_pred eEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc------C-----CcE-EEE-c-C
Q 023191 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------R-----PKL-IVA-G-A 203 (286)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~------~-----tk~-v~i-~-~ 203 (286)
-|.+.. ..-....++.++..-.+ ..+. ..|++++++...+. + |+- |++ . .
T Consensus 180 Ii~~de--------~~nfaIq~GlqlSRS~i--~~Fk------hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~ 243 (467)
T KOG1358|consen 180 IIFVDE--------AVNFAIQKGLQLSRSTI--SYFK------HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLY 243 (467)
T ss_pred EEEEeh--------hhhHHHHHHHhhhhhee--EEec------CCCHHHHHHhccCcchhhhhccccccceEEEEEEeec
Confidence 998876 22211222333332212 1112 23677776655330 1 232 333 3 8
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecccccccccc---CC---CCCCCCcceEEEeCCCCCCCCCCceEEEEec
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GV---IPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 272 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~---~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~~ 272 (286)
.|+|...|+.+|.++..|+..-||.|+..+.|.... ++ +.-+....|++++|..-.+++ .||+..++.
T Consensus 244 ~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas-~GgFc~G~~ 317 (467)
T KOG1358|consen 244 ANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS-GGGFCAGKS 317 (467)
T ss_pred cCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc-cCceeecce
Confidence 899999999999999999999999999999887754 11 122233589999998876643 456666644
No 320
>PRK07046 aminotransferase; Validated
Probab=98.70 E-value=6.3e-07 Score=83.35 Aligned_cols=195 Identities=13% Similarity=0.088 Sum_probs=111.9
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHh--cCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL--LKP 135 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~--~~~ 135 (286)
.|.+.+++.+.+......+. . .+.+.++.+.+.+.++.+ .|.+++ |+.|+..+++.. ...
T Consensus 93 ~p~i~~Av~~q~~~~~~~~~-------~----~~~~~~lAe~l~~~~~~~------~v~F~nSGtEA~e~AlrlAR~~TG 155 (453)
T PRK07046 93 PAPVARALAEQARRGLTTML-------P----SEDAAWVGEELARRFGLP------YWQVATTATDANRFVLRWARAVTG 155 (453)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------C----CHHHHHHHHHHHHHhCCC------EEEEECCHHHHHHHHHHHHHHhhC
Confidence 68999999888765321111 1 133444667777777533 266655 444777665543 345
Q ss_pred CCeEEeccCCCCcccCccccccccc-----cccceeee----EEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcC--C
Q 023191 136 HDRIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFF----ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA--S 204 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~----~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~--~ 204 (286)
.++|+.....|.+...........+ ....|... ....++ + -|++.+++.+...+..+|++.| .
T Consensus 156 r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~-nd~~~l~~~l~~~~vAavi~EPi~g 229 (453)
T PRK07046 156 RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE-----F-NDLAALEAALADGDVAAVLAEPAMT 229 (453)
T ss_pred CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC-----C-CCHHHHHHHhCCCCeEEEEECCCCC
Confidence 6788888877766521111000000 00111000 001111 1 2789999988644678888863 3
Q ss_pred CCCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEEeCCCCCCCCCCc-eEEEEecchhhhh
Q 023191 205 AYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (286)
Q Consensus 205 n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (286)
+.|...+ ++++.++|++||+++|.|+++..+. ..+.....+. ..|+++ +.|.++|... |++.+++++.+..
T Consensus 230 ~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~-g~Gg~~~~~gv~PDi~t--~gK~lggG~Pi~av~g~~~i~~~~ 306 (453)
T PRK07046 230 NIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISS-GPGGYTRAHGLEPDFLV--VGKPIAGGVPCAVYGFSAELAERA 306 (453)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCcc-CCcchhHHhCCCcccee--ehhhhcCCCcceeeeehHHHHHHH
Confidence 3443332 8999999999999999999985221 1111111111 268876 5899876544 8899998877665
Q ss_pred c
Q 023191 279 K 279 (286)
Q Consensus 279 ~ 279 (286)
.
T Consensus 307 ~ 307 (453)
T PRK07046 307 Q 307 (453)
T ss_pred h
Confidence 4
No 321
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.68 E-value=9e-07 Score=78.01 Aligned_cols=202 Identities=16% Similarity=0.182 Sum_probs=120.7
Q ss_pred cCceecCC-------CCCCCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCC-----CCcce
Q 023191 47 KGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-----EKWGV 114 (286)
Q Consensus 47 ~~i~L~~~-------e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~-----~~~~~ 114 (286)
+.|||..| ..+.-+.|++|-...+.+.. ...|-+-.+.+.+.+.+.+. +||.+. +.+ .
T Consensus 27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~------~k~Yl~i~G~~~f~~~~~~l---lFG~d~~~l~~~Rv-~ 96 (396)
T COG1448 27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEK------TKNYLPIEGLPEFLEAVQKL---LFGADSPALAEDRV-A 96 (396)
T ss_pred CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccc------ccccCCcCCcHHHHHHHHHH---hcCCCcHHHHhhhH-h
Confidence 66898754 22334555555544443322 23355556777777555544 467442 221 2
Q ss_pred eEEeCCChHHHHHHHH--HhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh
Q 023191 115 NVQSLSGSPSNFQVYT--ALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (286)
Q Consensus 115 ~v~~~sG~~a~~~~l~--a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (286)
.++...|+.|+..+.. .-..|...|.+++ |.|+.+......+|.+++..|+ .|.++..+|++.+.+.+.
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~--------PtW~NH~~If~~aGl~v~~Y~Y-yd~~~~~~df~~mla~L~ 167 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFFPDATVWISD--------PTWPNHKAIFEAAGLEVETYPY-YDAETKGLDFDGMLADLK 167 (396)
T ss_pred heecCCcchHHHHHHHHHHHhCCCceEEeCC--------CCcHhHHHHHHhcCCceeeeec-cccccccccHHHHHHHHH
Confidence 2444444445553322 2256777899999 6666666556677877777775 455677899999988886
Q ss_pred hcC-CcEEEE--cCCC-CC---CccCHHHHHHHHHhcCCEEEEeccccccccccCCCC--CCCC-----cc-eEEEeCCC
Q 023191 193 LFR-PKLIVA--GASA-YA---RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFE-----YA-DVVTTTTH 257 (286)
Q Consensus 193 ~~~-tk~v~i--~~~n-~g---~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~-----~~-D~v~~s~~ 257 (286)
.-. -.+|++ |.|| || +....++|+++.++.+.+.+.|.| +-|.-. ++.. ..+. +. -+++.|++
T Consensus 168 ~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~-GleeDa~~lR~~a~~~~~~lva~S~S 245 (396)
T COG1448 168 TAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA-YQGFAD-GLEEDAYALRLFAEVGPELLVASSFS 245 (396)
T ss_pred hCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh-hhhhcc-chHHHHHHHHHHHHhCCcEEEEehhh
Confidence 532 245556 3677 66 344578999999999999999999 333222 1111 1110 12 37799999
Q ss_pred CCC--CCCCceEEE
Q 023191 258 KSL--RGPRGAMIF 269 (286)
Q Consensus 258 K~l--~gp~gG~l~ 269 (286)
|.| .|=|-|.+.
T Consensus 246 KnfgLYgERVGa~~ 259 (396)
T COG1448 246 KNFGLYGERVGALS 259 (396)
T ss_pred hhhhhhhhccceeE
Confidence 987 444444433
No 322
>PRK12403 putative aminotransferase; Provisional
Probab=98.68 E-value=7.9e-07 Score=82.93 Aligned_cols=93 Identities=18% Similarity=0.138 Sum_probs=58.6
Q ss_pred HHHHHHHhhh---cCCcEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceE
Q 023191 184 YDQLEKSATL---FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADV 251 (286)
Q Consensus 184 ~e~l~~~i~~---~~tk~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~ 251 (286)
++++++.+.+ .++.+|++. .++.|...+ +++|.++|++||+++|.|++|. +|-..... ....+ ..|+
T Consensus 208 ~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDi 286 (460)
T PRK12403 208 ALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDT 286 (460)
T ss_pred HHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCe
Confidence 3556665532 245677776 333455555 9999999999999999999984 32222111 11111 2688
Q ss_pred EEeCCCCCCCCCC--ceEEEEecchhhhhc
Q 023191 252 VTTTTHKSLRGPR--GAMIFFRKGVKEINK 279 (286)
Q Consensus 252 v~~s~~K~l~gp~--gG~l~~~~~~~~~~~ 279 (286)
++ +.|.++|.. -|.+++++++.+...
T Consensus 287 v~--~gK~lggG~~Piga~v~~~~i~~~~~ 314 (460)
T PRK12403 287 LS--IAKGLTSGYVPMGGLVLSKRIAEALV 314 (460)
T ss_pred EE--EcccccccccceEEEEECHHHHHHHh
Confidence 86 789987542 266668888776654
No 323
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.67 E-value=2e-07 Score=83.58 Aligned_cols=178 Identities=17% Similarity=0.156 Sum_probs=112.9
Q ss_pred CCcchHHHHHHHHHHHHHHHCCCCCCC------cceeEEeCCChHHHHH-HHHHh------cCCC-----------CeEE
Q 023191 85 GGNEYIDMAESLCQKRALEAFRLDPEK------WGVNVQSLSGSPSNFQ-VYTAL------LKPH-----------DRIM 140 (286)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~g~~~~~------~~~~v~~~sG~~a~~~-~l~a~------~~~G-----------d~Vl 140 (286)
..++...+||..+-+|+.+..+++... -|-.|+.++.+.+.+. ++.+- ++.+ +-|.
T Consensus 106 ~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 106 ASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred ecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 445668899999999999999885311 1134666666553332 22221 1222 2333
Q ss_pred ec-cCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcC-----CcEEEEc--CCCCCCccCH
Q 023191 141 AL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG--ASAYARLYDY 212 (286)
Q Consensus 141 ~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~-----tk~v~i~--~~n~g~~~~l 212 (286)
++ +-.|.+. .+++.+.+.+.+.++ .+ +++.++.+.|+++|.+.. |-.++.+ .++.-...++
T Consensus 186 Y~SDqahssv--------eka~~i~~VklR~l~--td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l 254 (511)
T KOG0628|consen 186 YCSDQAHSSV--------EKACLIAGVKLRALP--TD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDEL 254 (511)
T ss_pred EecCcccchH--------HHhHhhcceeEEEee--cc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccH
Confidence 33 3222222 234556776777675 44 478999999999997643 3333334 2223367789
Q ss_pred HHHHHHHHhcCCEEEEeccccccccccCC---CCCCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 213 ERIRKVCNKQKAIMLADMAHISGLVAAGV---IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 213 ~~I~~ia~~~~~~vivD~a~~~g~~~~~~---~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
++|..+|+++++|+++|+|++..+..... .-.+++.+|.+.+++|||+..--. ..++.++.
T Consensus 255 ~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~ 319 (511)
T KOG0628|consen 255 EELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDG 319 (511)
T ss_pred HHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecC
Confidence 99999999999999999996544333222 223445699999999999866555 66777765
No 324
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.66 E-value=1.3e-06 Score=80.36 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=105.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC-CChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~-sG~~a~~~~l~a~~--- 133 (286)
-.|.+.+++.+.+.... +.... +. .+...++.+++.+..... + .+.++ ||+.|+..+++...
T Consensus 57 ~~p~v~~ai~~q~~~~~---~~~~~-~~-----~~~~~~la~~L~~~~~~~-~----~v~f~~sGseA~e~AlklAr~~~ 122 (408)
T PRK04612 57 NDPDLVAALTEQAGKLW---HTSNV-FY-----SAPPLKLAEELVTASRFA-E----KVFLCNSGTEANEAAIKLVRKWA 122 (408)
T ss_pred CCHHHHHHHHHHHHhcc---ccccc-cC-----CHHHHHHHHHHHhhCCCC-C----EEEEcCchHHHHHHHHHHHHHHH
Confidence 47888888888775421 11110 11 122223556666655321 2 36665 45557776654331
Q ss_pred ---C--C-CCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-C
Q 023191 134 ---K--P-HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-Y 206 (286)
Q Consensus 134 ---~--~-Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~ 206 (286)
. + ..+|+.....|.+...-....-... .... .+...+-.+. .-...|++.+++.+.+.++.+|++.|.+ +
T Consensus 123 ~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~-~~~~-~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~aavi~eP~~~~ 199 (408)
T PRK04612 123 SSQGRPADKRVIVTFRGSFHGRTLAAVTATAQP-KYQE-GYEPLPGGFR-YVDFNDVEALEAAMAGGDVAAVMLEPIQGE 199 (408)
T ss_pred HhhCCCCCCcEEEEECCCcCCccHHHHHhcCCc-cccc-CCCCCCCCce-EcCCCCHHHHHHhhCCCCEEEEEECCccCC
Confidence 1 1 2468888766665531111000000 0000 0000000000 0012378999988865356677776555 4
Q ss_pred C-Ccc----CHHHHHHHHHhcCCEEEEeccccccccccC-CCCCCCCcceEEEeCCCCCCCCC-CceEEEEecchhhhhc
Q 023191 207 A-RLY----DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGVKEINK 279 (286)
Q Consensus 207 g-~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~~~D~v~~s~~K~l~gp-~gG~l~~~~~~~~~~~ 279 (286)
| ... -+++|.++|++||+++|+|++|. |.-..+ .......+...-+.++.|.+++. +-|++++++++.+...
T Consensus 200 gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~~~ 278 (408)
T PRK04612 200 GGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQ 278 (408)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECHHHHhhhc
Confidence 4 222 38899999999999999999986 321111 11000012333456679988643 3478888877766655
Q ss_pred c
Q 023191 280 Q 280 (286)
Q Consensus 280 ~ 280 (286)
.
T Consensus 279 ~ 279 (408)
T PRK04612 279 F 279 (408)
T ss_pred C
Confidence 4
No 325
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.66 E-value=8.1e-07 Score=82.36 Aligned_cols=205 Identities=13% Similarity=0.075 Sum_probs=109.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~--~~ 134 (286)
-+|++.+++.+.+.... .+.... + .. +...++.+++.+++.-..+ .|++ .||+.|+.++++.. ..
T Consensus 60 ~~p~v~~a~~~q~~~~~-~~~~~~--~-~~----~~~~~la~~L~~~~~~~~~----~v~f~~SGseA~e~AlklAr~~t 127 (433)
T PRK08117 60 RHPKVVQAIKEQADKLM-HGPSGV--I-YY----ESILKLAEELAEITPGGLD----CFFFSNSGAEAIEGALKLAKHVT 127 (433)
T ss_pred CCHHHHHHHHHHHHhcc-Cccccc--c-CC----HHHHHHHHHHHHhCCCCCC----EEEEeCcHHHHHHHHHHHHHHhc
Confidence 47899999988775421 111110 1 11 2333455777777732222 3666 56666887766642 23
Q ss_pred CCCeEEeccCCCCcccCccc------cccccc--cccceeeeEEEecccCC---CCC------CCCHHHHHHHhhh----
Q 023191 135 PHDRIMALDLPHGGHLSHGY------QTDTKK--ISAVSIFFETMPYRLNE---STG------YIDYDQLEKSATL---- 193 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~------~~~~~~--~~~~g~~~~~v~~~~~~---~~~------~~d~e~l~~~i~~---- 193 (286)
...+|+..+..|.+...-.. ..++.. ....+ +..+|++... ... .-|++++++.+..
T Consensus 128 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 205 (433)
T PRK08117 128 KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGS--VYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTP 205 (433)
T ss_pred CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCC--cEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCC
Confidence 34667777755554321100 000000 00011 1223322100 000 0256677776642
Q ss_pred cCCcEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCC-C-CCCC-cceEEEeCCCCCCCCC-
Q 023191 194 FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSLRGP- 263 (286)
Q Consensus 194 ~~tk~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~-~~~~-~~D~v~~s~~K~l~gp- 263 (286)
.++.+|++. .++-|...+ +++|.++|++||+++|+|++|. |....+.. . ..+. -.|+ .++.|.+++.
T Consensus 206 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~ 282 (433)
T PRK08117 206 EEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKGIASGL 282 (433)
T ss_pred CcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhhccCCC
Confidence 256777776 344555555 9999999999999999999987 53221210 0 0111 1454 5889998643
Q ss_pred CceEEEEecchhhhhc
Q 023191 264 RGAMIFFRKGVKEINK 279 (286)
Q Consensus 264 ~gG~l~~~~~~~~~~~ 279 (286)
+.|++++++++.+...
T Consensus 283 pigav~~~~~i~~~~~ 298 (433)
T PRK08117 283 PLSAVVASKELMEQWP 298 (433)
T ss_pred cceeEEEcHHHHhhcc
Confidence 3488888888766543
No 326
>PLN00144 acetylornithine transaminase
Probab=98.64 E-value=6.9e-07 Score=81.46 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=63.9
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCC-CCC---ccC--HHHHHHHHHhcCCEEEEeccccccccccC-CCCCCCC--cceEEE
Q 023191 183 DYDQLEKSATLFRPKLIVAGASA-YAR---LYD--YERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSPFE--YADVVT 253 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n-~g~---~~~--l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~~~--~~D~v~ 253 (286)
|++.+++.+...++++|++.|.. .|. ... +++|.++|++||+++|.|+++. |....+ .....+. ..| +
T Consensus 155 d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PD--i 231 (382)
T PLN00144 155 NLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPD--I 231 (382)
T ss_pred CHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCC--E
Confidence 78999988865578888887444 221 223 8899999999999999999975 221111 1110011 256 5
Q ss_pred eCCCCCCCCC-CceEEEEecchhhhhcc
Q 023191 254 TTTHKSLRGP-RGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 254 ~s~~K~l~gp-~gG~l~~~~~~~~~~~~ 280 (286)
.++.|.+++. +.|+++++.++.+..+.
T Consensus 232 ~t~sK~l~~G~pig~v~~~~~~~~~~~~ 259 (382)
T PLN00144 232 MTLAKPLAGGLPIGAVLVTEKVASAINP 259 (382)
T ss_pred EEecccccCCcceEEEEEcHHHHhccCC
Confidence 6679998543 34999999888776654
No 327
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.62 E-value=1.9e-06 Score=80.06 Aligned_cols=209 Identities=11% Similarity=0.035 Sum_probs=107.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh--cCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKP 135 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~--~~~ 135 (286)
-.|++.+++.+.+.+.. .+.. . ....+.+.++.+++.+.+.....+ .-.+.+||+.|+..+++.. ...
T Consensus 73 ~~p~v~~ai~~q~~~~~--~~~~----~--~~~~~~~~~la~~l~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tg 142 (443)
T PRK06058 73 SAPRVVEAVREQVARFT--HTCF----M--VTPYEGYVAVAEQLNRLTPGDHEK--RSALFNSGAEAVENAVKIARSYTG 142 (443)
T ss_pred CCHHHHHHHHHHHHhcc--Cccc----c--ccCCHHHHHHHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHhhC
Confidence 37899999988776421 0000 0 001133334667777776532111 1245566766777666522 234
Q ss_pred CCeEEeccCCCCcccCcccc------ccccccccceeeeEEEecc--cCCC-CCCC--------CHHHHHHHhhhcCCcE
Q 023191 136 HDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYR--LNES-TGYI--------DYDQLEKSATLFRPKL 198 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~--~~~~-~~~~--------d~e~l~~~i~~~~tk~ 198 (286)
.++|+.....|.+...-... .++.+....-..+..+|++ .+.. .... .++.+++.+...++.+
T Consensus 143 r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAa 222 (443)
T PRK06058 143 RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAA 222 (443)
T ss_pred CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEE
Confidence 47898888777665310000 0111100000001112211 1100 0011 1233444443336788
Q ss_pred EEEcCCC-C-CCcc----CHHHHHHHHHhcCCEEEEeccccccccccC-CC---CCCCCcceEEEeCCCCCCCCCC-ceE
Q 023191 199 IVAGASA-Y-ARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAG-VI---PSPFEYADVVTTTTHKSLRGPR-GAM 267 (286)
Q Consensus 199 v~i~~~n-~-g~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~---~~~~~~~D~v~~s~~K~l~gp~-gG~ 267 (286)
|++.|-+ . |... -+++|.++|++||+++|.|+++. |.--.+ .. ...+ ..|++++ .|.++|.- .|+
T Consensus 223 vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv-~PDiv~~--gK~l~~G~Pi~a 298 (443)
T PRK06058 223 VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGI-VPDLITT--AKGIAGGLPLSA 298 (443)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCC-CCCEEEE--cccccCCCccEE
Confidence 8886443 3 3332 29999999999999999999975 321111 11 1111 2688877 49886543 388
Q ss_pred EEEecchhhhhcc
Q 023191 268 IFFRKGVKEINKQ 280 (286)
Q Consensus 268 l~~~~~~~~~~~~ 280 (286)
+++++++.+..+.
T Consensus 299 v~~~~~i~~~~~~ 311 (443)
T PRK06058 299 VTGRAEIMDAPHP 311 (443)
T ss_pred EEEcHHHHhhccC
Confidence 8899887766553
No 328
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.59 E-value=3.6e-06 Score=78.61 Aligned_cols=196 Identities=15% Similarity=0.124 Sum_probs=108.3
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHh--cCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL--LKP 135 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~--~~~ 135 (286)
+|+|.+++.+.+..... + ... .+.+.++.+++.+.+.. .+ .|.+++ |+.|+..+++.. ...
T Consensus 117 ~p~v~~av~~ql~~~~~--~-----~~~----~~~~~~lAe~l~~~~p~-~~----~v~f~~SGsEA~e~AlklAR~~tg 180 (474)
T PLN02482 117 DDEVLAALAETMKKGTS--F-----GAP----CLLENVLAEMVIDAVPS-VE----MVRFVNSGTEACMGVLRLARAYTG 180 (474)
T ss_pred CHHHHHHHHHHHhhCCC--C-----CCC----CHHHHHHHHHHHHhCCC-CC----EEEEeCChHHHHHHHHHHHHHhcC
Confidence 68888888887765221 1 011 12333466777776642 22 366655 544777665543 234
Q ss_pred CCeEEeccCCCCcccCccccccccc------cccceee----eEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-
Q 023191 136 HDRIMALDLPHGGHLSHGYQTDTKK------ISAVSIF----FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG- 202 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~~~~~------~~~~g~~----~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~- 202 (286)
.++|+.....|.++..........+ ....+.. ...+.++. -|++++++.+..+ +..+|++.
T Consensus 181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------nd~~~l~~~l~~~~~~iAavI~Ep 254 (474)
T PLN02482 181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY------NDLEAVKKLFEANKGEIAAVILEP 254 (474)
T ss_pred CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC------CChHHHHHHHHhCCCceEEEEECC
Confidence 5678888777766532111000000 0000000 00011111 2788999888642 46677776
Q ss_pred -CCCCCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCCC-CCCC-cceEEEeCCCCCCCCCCc-eEEEEecch
Q 023191 203 -ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFE-YADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (286)
Q Consensus 203 -~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~~-~~D~v~~s~~K~l~gp~g-G~l~~~~~~ 274 (286)
.++.|.+.| +++|.++|++||+++|+|++| .|........ ..+. ..|++ ++.|.++|... |.+.+++++
T Consensus 255 v~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGfR~g~~ga~~~~gv~PDi~--t~gK~lggG~Pigav~g~~ei 331 (474)
T PLN02482 255 VVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGFRIAYGGAQEYFGITPDLT--TLGKVIGGGLPVGAYGGRREI 331 (474)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCeecCcchHhHHhCCCCCEE--EecchhhCCCceEEEEEcHHH
Confidence 444454333 779999999999999999998 4542211100 0011 26775 45899976333 666888888
Q ss_pred hhhhc
Q 023191 275 KEINK 279 (286)
Q Consensus 275 ~~~~~ 279 (286)
.+...
T Consensus 332 ~~~~~ 336 (474)
T PLN02482 332 MEMVA 336 (474)
T ss_pred HHhhc
Confidence 87765
No 329
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.59 E-value=2.6e-06 Score=79.06 Aligned_cols=207 Identities=19% Similarity=0.150 Sum_probs=108.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-.|.+.+++.+.+.+.. +.....+ .+ +.+.++.+++.+++....+ .|.+ .||+.|+.+++....
T Consensus 63 ~~p~v~~ai~~ql~~l~---~~~~~~~-~~----~~~~~la~~l~~~~p~~~~----~v~f~~sGseA~e~AlklAr~~~ 130 (442)
T PRK13360 63 GRPEIVEAVRAQAGELD---YAPAFQM-GH----PKAFELANRIAEIAPGGLN----HVFFTNSGSESVDTALKIALAYH 130 (442)
T ss_pred CCHHHHHHHHHHHHhCC---CcccCCc-CC----HHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 47889989888775421 1000001 11 2233456777777632222 3555 455557776655331
Q ss_pred ----CC-CCeEEeccCCCCcccCcc-----ccccccccccceeeeEEEecccC--CCCCCC--------CHHHHHHHhhh
Q 023191 134 ----KP-HDRIMALDLPHGGHLSHG-----YQTDTKKISAVSIFFETMPYRLN--ESTGYI--------DYDQLEKSATL 193 (286)
Q Consensus 134 ----~~-Gd~Vl~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~--------d~e~l~~~i~~ 193 (286)
.+ ..+|+.....|.+...-. ...++....-....+..+|.+.+ ...+.. .++++++++..
T Consensus 131 ~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 210 (442)
T PRK13360 131 RARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTL 210 (442)
T ss_pred HhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHh
Confidence 12 357888887776652100 00011100000001122332211 000111 24677777752
Q ss_pred ---cCCcEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCCCC
Q 023191 194 ---FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLR 261 (286)
Q Consensus 194 ---~~tk~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~ 261 (286)
.++.+|++. .++.|...+ +++|.++|++||+++|+|++|. +|-..... ....+ ..|++ ++.|.++
T Consensus 211 ~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv--t~gK~l~ 287 (442)
T PRK13360 211 HDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLL--TCAKGLT 287 (442)
T ss_pred cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCcee--eeeeccc
Confidence 245677776 333555555 9999999999999999999983 44332111 11111 26776 5689997
Q ss_pred CC--CceEEEEecchhhhhc
Q 023191 262 GP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 262 gp--~gG~l~~~~~~~~~~~ 279 (286)
|. +-|.+++++++.+...
T Consensus 288 gG~~P~gav~~~~~i~~~~~ 307 (442)
T PRK13360 288 NGAIPMGAVFVSSEIHDAFM 307 (442)
T ss_pred cCccceEEEEEcHHHHHHhh
Confidence 53 2366777888776654
No 330
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.59 E-value=2e-06 Score=79.37 Aligned_cols=209 Identities=11% Similarity=0.039 Sum_probs=110.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC-CCCcceeEEeCCChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~v~~~sG~~a~~~~l~a~--~~ 134 (286)
-.|.+.+++.+.+.... +... .. ...+.+.++.+.+.+..... .+. ..+.+||+.|+..++... ..
T Consensus 57 ~~p~v~~ai~~ql~~~~---~~~~---~~--~~~~~~~~la~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK09792 57 RHPDLVAAVEQQLQQFT---HTAY---QI--VPYESYVTLAEKINALAPVSGQAK---TAFFTTGAEAVENAVKIARAHT 125 (421)
T ss_pred CCHHHHHHHHHHHHhcc---Cccc---Cc--cCCHHHHHHHHHHHHhCCCCCCce---EEEeCChHHHHHHHHHHHHHhc
Confidence 37888888888776421 1100 00 01122223556676665421 121 244566666777655533 23
Q ss_pred CCCeEEeccCCCCcccCcccc------ccccccccceeeeEEEecccCCCCC--CCCHHHHHHHhhh----cCCcEEEEc
Q 023191 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNESTG--YIDYDQLEKSATL----FRPKLIVAG 202 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~~~--~~d~e~l~~~i~~----~~tk~v~i~ 202 (286)
...+|+.....|.+...-... .++.+....-..+..+|++.+.... .-+++.+++.+.+ .++++|++.
T Consensus 126 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~E 205 (421)
T PRK09792 126 GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFE 205 (421)
T ss_pred CCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEc
Confidence 345788887766655311100 0111100000012334444321110 1135778887752 357788887
Q ss_pred CCC--CCC-ccC---HHHHHHHHHhcCCEEEEeccccc-cccccCCCC-CCC-CcceEEEeCCCCCCCCC-CceEEEEec
Q 023191 203 ASA--YAR-LYD---YERIRKVCNKQKAIMLADMAHIS-GLVAAGVIP-SPF-EYADVVTTTTHKSLRGP-RGAMIFFRK 272 (286)
Q Consensus 203 ~~n--~g~-~~~---l~~I~~ia~~~~~~vivD~a~~~-g~~~~~~~~-~~~-~~~D~v~~s~~K~l~gp-~gG~l~~~~ 272 (286)
|.. .|. ..| +++|.++|++||+++|+|+++.. |-.. .... ..+ ...|+ .++.|.+++. +.|++++++
T Consensus 206 Pvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G-~~~a~~~~~~~pDi--~t~gK~l~~G~pigav~~~~ 282 (421)
T PRK09792 206 PVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG-KLFAMDHYADKPDL--MTMAKSLAGGMPLSGVVGNA 282 (421)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC-chhHHHhcCCCCcE--EEeehhhcCCCceEEEEEcH
Confidence 443 343 335 88999999999999999999762 2211 1111 001 12574 5669998653 348899998
Q ss_pred chhhhhcc
Q 023191 273 GVKEINKQ 280 (286)
Q Consensus 273 ~~~~~~~~ 280 (286)
++.+....
T Consensus 283 ~i~~~~~~ 290 (421)
T PRK09792 283 NIMDAPAP 290 (421)
T ss_pred HHHhccCC
Confidence 88776553
No 331
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.58 E-value=3.3e-06 Score=78.08 Aligned_cols=202 Identities=13% Similarity=0.123 Sum_probs=109.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~--~~ 134 (286)
-.|.+.+++.+.+.+....+ + .+ +.+.++.+.+.+.++...+ .|.+ .||+.|+..+++.. ..
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~------~-~~----~~~~~la~~L~~~~~~~~~----~v~f~~SGsEA~e~AiklAr~~t 134 (433)
T PRK00615 70 SHPKICDAIQQGAERGTSYG------L-TS----EQEILFAEELFSYLGLEDH----KIRFVSSGTEATMTAVRLARGIT 134 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCC------C-CC----HHHHHHHHHHHHhCCCCcC----EEEEeCchHHHHHHHHHHHHHhh
Confidence 47899999988776522100 1 11 2223355777777654322 3555 45555777666543 23
Q ss_pred CCCeEEeccCCCCcccCc-cccccccccccceeeeEEE-ecccCCC--C-CCCCHHHHHHHhhhc--CCcEEEEc--CCC
Q 023191 135 PHDRIMALDLPHGGHLSH-GYQTDTKKISAVSIFFETM-PYRLNES--T-GYIDYDQLEKSATLF--RPKLIVAG--ASA 205 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~v-~~~~~~~--~-~~~d~e~l~~~i~~~--~tk~v~i~--~~n 205 (286)
...+|+.....|.+.... ...+-...-...+. .... +-..... . ..-|++++++.+.++ ++.+|++. .++
T Consensus 135 gr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~ 213 (433)
T PRK00615 135 GRSIIIKFLGCYHGHADTLLQGISFSETSLDTL-THLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICAN 213 (433)
T ss_pred CCCEEEEEcCccCCCCcccCcccccCCCCcCcC-CCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCC
Confidence 346788777666664311 10000000000000 0000 0000000 0 012788898888542 45677776 444
Q ss_pred CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCC---CCCCCCcceEEEeCCCCCCCCC-CceEEEEecchhhh
Q 023191 206 YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV---IPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGVKEI 277 (286)
Q Consensus 206 ~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~---~~~~~~~~D~v~~s~~K~l~gp-~gG~l~~~~~~~~~ 277 (286)
.|...| +++|.++|++||+++|+|++|. |...... ....+ ..|+++ +.|.++|. .+|++++++++.+.
T Consensus 214 ~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R~G~~ga~~~~gv-~PDi~~--~gK~lggG~p~~av~~~~~i~~~ 289 (433)
T PRK00615 214 MGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFRVAQGGAAAIYHV-KPDITV--YGKILGGGLPAAAVVAHKSIMDH 289 (433)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cccccHhHHHHhcCC-CCCeEE--EcccccCCcceeeeeecHHHHhh
Confidence 454444 6799999999999999999984 5411111 11111 268775 69999753 46999999998877
Q ss_pred hc
Q 023191 278 NK 279 (286)
Q Consensus 278 ~~ 279 (286)
..
T Consensus 290 ~~ 291 (433)
T PRK00615 290 LA 291 (433)
T ss_pred hc
Confidence 64
No 332
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.54 E-value=6.4e-06 Score=75.48 Aligned_cols=207 Identities=13% Similarity=0.021 Sum_probs=109.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh--cCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKP 135 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~--~~~ 135 (286)
.+|.|++|+.+.+....... .+ +... +....+.+++.+.+..+... ...+.+||+.|+.+++..- ...
T Consensus 73 ~hP~Vv~Av~~q~~~~~h~~---~~-~~~~----e~~v~~ae~L~~~~p~~~~~--~~~f~~sGaeA~E~AiKiAr~~Tg 142 (447)
T COG0160 73 NHPRVVEAVKRQLAKLNHTH---TR-DLYY----EPYVELAEKLTALAPGSGLK--KVFFGNSGAEAVEAAIKIARAYTG 142 (447)
T ss_pred CCHHHHHHHHHHHHHhhccc---CC-cccc----hhHHHHHHHHHHhCCcccCC--eEEecCCcHHHHHHHHHHHHHHhC
Confidence 47999999988665421001 11 1111 22222446666666542111 2344466666887766544 344
Q ss_pred CCeEEeccCCCCcccCcccc------ccccccccceeeeEEEecccCCC-CC--------CCCHHHHHHHhhh-----cC
Q 023191 136 HDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNES-TG--------YIDYDQLEKSATL-----FR 195 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~-~~--------~~d~e~l~~~i~~-----~~ 195 (286)
+..|+.+...|.+...-... .++.+..-....+..+|++.... -+ .-..+.++..+.. .+
T Consensus 143 r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~ 222 (447)
T COG0160 143 RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEE 222 (447)
T ss_pred CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCc
Confidence 56788887766654321111 11111111112244566552211 11 1133445554432 24
Q ss_pred CcEEEEc--CCCCCCc----cCHHHHHHHHHhcCCEEEEeccccccccccCCCC---CCCCcceEEEeCCCCCCCCCCc-
Q 023191 196 PKLIVAG--ASAYARL----YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG- 265 (286)
Q Consensus 196 tk~v~i~--~~n~g~~----~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~v~~s~~K~l~gp~g- 265 (286)
+.++++. ...-|.. .-++++.++|++||+++|+|++|..--....++. ..+ -.|+++ +.|.++|.-.
T Consensus 223 vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt--~aK~ig~G~Pl 299 (447)
T COG0160 223 VAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVT--LAKSLGGGLPL 299 (447)
T ss_pred eeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEE--ecccccCCCce
Confidence 7788886 2223322 2388999999999999999999973211112211 111 267776 4688877444
Q ss_pred eEEEEecchhhh
Q 023191 266 AMIFFRKGVKEI 277 (286)
Q Consensus 266 G~l~~~~~~~~~ 277 (286)
|.+.++.++.++
T Consensus 300 ~avv~r~ei~~~ 311 (447)
T COG0160 300 SAVVGRAEIMDW 311 (447)
T ss_pred eEEeccHHhccc
Confidence 999999888764
No 333
>PRK06541 hypothetical protein; Provisional
Probab=98.52 E-value=3.8e-06 Score=78.35 Aligned_cols=206 Identities=11% Similarity=0.043 Sum_probs=106.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-.|.+.+++.+.+.... +.....+. .+...++.+++.+.+..+.+ .|.+ +||+.|+.+++....
T Consensus 69 ~~p~v~~Av~~q~~~~~---~~~~~~~~-----~~~~~~la~~l~~~~p~~~~----~v~f~~sGseAve~AlklAr~~~ 136 (460)
T PRK06541 69 GRAELAEAAAKQAGTLA---FFPLWSYA-----HPPAIELAERLAALAPGDLN----RVFFTTGGSEAVESAWKLAKQYF 136 (460)
T ss_pred CCHHHHHHHHHHHhhCc---CccccccC-----CHHHHHHHHHHHHhCCCCcC----EEEEcCCcHHHHHHHHHHHHHHH
Confidence 37889999988776421 10000011 12223355777776543222 3565 455557776555321
Q ss_pred --C---CCCeEEeccCCCCcccCccccc-----cccc--cccceeeeEEEecccCC--CCCCCC--------HHHHHHHh
Q 023191 134 --K---PHDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNE--STGYID--------YDQLEKSA 191 (286)
Q Consensus 134 --~---~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~--~~~~~d--------~e~l~~~i 191 (286)
. ...+|+.....|.+...-.... ++.. ....| +..+|.+... ..+.-| ++.+++.+
T Consensus 137 ~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 214 (460)
T PRK06541 137 KLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPG--GFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAI 214 (460)
T ss_pred HhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCC--cEEeCCCccccccccCCCHHHHHHHHHHHHHHHH
Confidence 1 2467888876666553211110 0000 00111 1222221100 001112 36677777
Q ss_pred hh---cCCcEEEEcC-CC-CCCccC----HHHHHHHHHhcCCEEEEeccc-cccccccCCCCCCCC-cceEEEeCCCCCC
Q 023191 192 TL---FRPKLIVAGA-SA-YARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAAGVIPSPFE-YADVVTTTTHKSL 260 (286)
Q Consensus 192 ~~---~~tk~v~i~~-~n-~g~~~~----l~~I~~ia~~~~~~vivD~a~-~~g~~~~~~~~~~~~-~~D~v~~s~~K~l 260 (286)
.. .++.+|++.| .+ .|...+ +++|.++|++||+++|+|++| ++|-.........+. ..|+++ +.|.+
T Consensus 215 ~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l 292 (460)
T PRK06541 215 EFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGI 292 (460)
T ss_pred HhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccc
Confidence 53 2455666664 23 455555 999999999999999999998 455332211110011 268775 78998
Q ss_pred CCC--CceEEEEecchhhhhc
Q 023191 261 RGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~~ 279 (286)
++. +-|++++++++.+...
T Consensus 293 ~~G~~pigav~~~~~i~~~~~ 313 (460)
T PRK06541 293 TSGYSPLGAMIASDRLFEPFL 313 (460)
T ss_pred cCCccceeEEEEcHHHHHHhh
Confidence 753 2477777777665443
No 334
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.52 E-value=3.4e-06 Score=78.04 Aligned_cols=206 Identities=15% Similarity=0.089 Sum_probs=104.2
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe--CCChHHHHHHHHHh--c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS--LSGSPSNFQVYTAL--L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~--~sG~~a~~~~l~a~--~ 133 (286)
-+|.+.+++.+.+.... +.....+ .+ +.+.++.+.+.+.+..+.+ +...+.+ .||+.|+..+++.. .
T Consensus 56 ~~p~v~~ai~~ql~~~~---~~~~~~~-~~----~~~~~lae~l~~~~~~~~~-~~~~~~f~~~sGseA~e~AlklAr~~ 126 (425)
T PRK09264 56 NNPVLKQALIDYLQRDG---ITHGLDM-HT----TAKREFLETFEETILKPRG-LDYKVQFTGPTGTNAVEAALKLARKV 126 (425)
T ss_pred CCHHHHHHHHHHHHhcc---ccccccc-Cc----HHHHHHHHHHHHhhcCCcC-CCceEEEeCCCHHHHHHHHHHHHHHh
Confidence 37888999988775311 1000001 11 2222345666665422110 0013544 47777777655543 3
Q ss_pred CCCCeEEeccCCCCcccCccc-----cccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc-
Q 023191 134 KPHDRIMALDLPHGGHLSHGY-----QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAG- 202 (286)
Q Consensus 134 ~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~-----~tk~v~i~- 202 (286)
....+|+.....|.+...-.. ..++......-..+..+|++.......-|++++++.+.+. ++.+|++.
T Consensus 127 tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Ep 206 (425)
T PRK09264 127 TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVET 206 (425)
T ss_pred cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEec
Confidence 344678887766665421000 0011110000001233443211000013678888888642 35677775
Q ss_pred -CCCCCC-c---cCHHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCCCCC-C-CceEEEEec
Q 023191 203 -ASAYAR-L---YDYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRG-P-RGAMIFFRK 272 (286)
Q Consensus 203 -~~n~g~-~---~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~g-p-~gG~l~~~~ 272 (286)
..+.|. . ..+++|.++|++||+++|+|++|. +|-....+ ....+ ..|++++ .|.+++ . +-|++++++
T Consensus 207 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~--~K~l~~~G~pigav~~~~ 283 (425)
T PRK09264 207 VQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTL--SKSISGYGLPMALVLIKP 283 (425)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEe--ccccCCCccceEEEEEch
Confidence 333442 2 359999999999999999999985 21111000 00111 2687765 598864 2 228888887
Q ss_pred chh
Q 023191 273 GVK 275 (286)
Q Consensus 273 ~~~ 275 (286)
++.
T Consensus 284 ~i~ 286 (425)
T PRK09264 284 ELD 286 (425)
T ss_pred hhh
Confidence 764
No 335
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.51 E-value=6.6e-06 Score=76.05 Aligned_cols=207 Identities=15% Similarity=0.096 Sum_probs=108.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~--~~ 134 (286)
-.|.+.+++.+.+.... +.... .... +...++.+++.+.+.-.... .|.+++ |+.|+.++++.. ..
T Consensus 57 ~~p~v~~ai~~ql~~l~---~~~~~-~~~~----~~~~~la~~l~~~~p~~~~~---~v~f~~SGseA~e~AlklAr~~t 125 (425)
T PRK07495 57 RHPRVIAAVKAQLDRFT---HTCHQ-VVPY----ENYVRLAERLNALVPGDFAK---KTIFVTTGAEAVENAVKIARAAT 125 (425)
T ss_pred CCHHHHHHHHHHHhhcc---CcccC-ccCC----HHHHHHHHHHHHhCCCCCCC---EEEECCchHHHHHHHHHHHHHhh
Confidence 47888899888776421 10000 0111 22233557777766432111 366655 555777665533 23
Q ss_pred CCCeEEeccCCCCcccCcccc------cccccc--ccceeeeEEEecccCCCCC--CCCHHHHHHHhh----hcCCcEEE
Q 023191 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKI--SAVSIFFETMPYRLNESTG--YIDYDQLEKSAT----LFRPKLIV 200 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~------~~~~~~--~~~g~~~~~v~~~~~~~~~--~~d~e~l~~~i~----~~~tk~v~ 200 (286)
...+|+.....|.+...-... .++... ...+ +..+|++.+.... .-+++++++.+. ..++++|+
T Consensus 126 gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi 203 (425)
T PRK07495 126 GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPD--VYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAII 203 (425)
T ss_pred CCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCC--eEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEE
Confidence 456788887766655311100 011110 0111 2334433221110 012455576664 23577888
Q ss_pred Ec--CCCCCCc-c---CHHHHHHHHHhcCCEEEEeccccccccccC-CCCC-CCC-cceEEEeCCCCCCCCC-CceEEEE
Q 023191 201 AG--ASAYARL-Y---DYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPS-PFE-YADVVTTTTHKSLRGP-RGAMIFF 270 (286)
Q Consensus 201 i~--~~n~g~~-~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~-~~~-~~D~v~~s~~K~l~gp-~gG~l~~ 270 (286)
+. ..|.|.. . -+++|.++|++||+++|.|++|. |.-..+ .... ... ..|+ .++.|.+++. +.|++++
T Consensus 204 ~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi--~tlsK~l~~G~pigav~~ 280 (425)
T PRK07495 204 IEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADL--TTMAKGLAGGFPLAAVTG 280 (425)
T ss_pred ECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCE--EeehhhhcCCccceEEEE
Confidence 86 3334422 2 38899999999999999999975 332111 1100 010 1454 5568988654 3488999
Q ss_pred ecchhhhhcc
Q 023191 271 RKGVKEINKQ 280 (286)
Q Consensus 271 ~~~~~~~~~~ 280 (286)
++++.+..+.
T Consensus 281 ~~~i~~~~~~ 290 (425)
T PRK07495 281 RAEIMDAPGP 290 (425)
T ss_pred cHHHHhccCC
Confidence 9888776654
No 336
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.51 E-value=9.6e-06 Score=75.33 Aligned_cols=205 Identities=14% Similarity=0.037 Sum_probs=105.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~--~~ 134 (286)
-.|++.+++.+.+.... +.... ....+.+.++.+++.+.+.-... ..|.++++.+ |+.++++.. ..
T Consensus 71 ~~p~v~~Ai~~ql~~~~---~~~~~-----~~~~~~~~~lAe~L~~~~p~~~~---~~v~f~~SGsEA~e~AlklAr~~t 139 (441)
T PRK05769 71 AHPKVVKAVKEQAEKFL---HYSLT-----DFYYEPAVELAERLVEIAPGGFE---KKVFFTNSGTESNEAAIKIARYHT 139 (441)
T ss_pred CCHHHHHHHHHHHHhcc---CccCc-----ccCCHHHHHHHHHHHHhCCCCCC---CEEEECCchHHHHHHHHHHHHHHh
Confidence 36888899888776521 11100 01112333466777777642111 1366655444 777666533 23
Q ss_pred CCCeEEeccCCCCcccCccccc------cccc--cccceeeeEEEecccCC-CCCC---------CCHHHHHH-Hhh---
Q 023191 135 PHDRIMALDLPHGGHLSHGYQT------DTKK--ISAVSIFFETMPYRLNE-STGY---------IDYDQLEK-SAT--- 192 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~------~~~~--~~~~g~~~~~v~~~~~~-~~~~---------~d~e~l~~-~i~--- 192 (286)
..++|+.....|.+...-.... ++.. ....| +..++.+... ..+. -+++.+++ .++
T Consensus 140 gr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~ 217 (441)
T PRK05769 140 GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPG--VIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLV 217 (441)
T ss_pred CCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCC--eEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhcc
Confidence 4567888776665543111000 0000 00111 2223322100 0000 12344555 222
Q ss_pred -hcCCcEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCCCCC
Q 023191 193 -LFRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRG 262 (286)
Q Consensus 193 -~~~tk~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~g 262 (286)
..++.+|++. .++.|...+ +++|.++|++||+++|+|++|. +|-..... ....+ ..|++++ .|.+++
T Consensus 218 ~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~--~K~l~~ 294 (441)
T PRK05769 218 PPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITL--AKAIAG 294 (441)
T ss_pred CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEE--cccccC
Confidence 2256777776 333455556 9999999999999999999987 22221111 11111 2588764 598865
Q ss_pred CC-ceEEEEecchhhhh
Q 023191 263 PR-GAMIFFRKGVKEIN 278 (286)
Q Consensus 263 p~-gG~l~~~~~~~~~~ 278 (286)
.. .|++++++++.+..
T Consensus 295 G~p~gav~~~~~i~~~~ 311 (441)
T PRK05769 295 GLPLGAVIGRAELMFLP 311 (441)
T ss_pred CcccEEEEEehhhhhcC
Confidence 43 48888888876543
No 337
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.50 E-value=7.8e-06 Score=75.95 Aligned_cols=206 Identities=12% Similarity=0.043 Sum_probs=108.1
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~--~~ 134 (286)
-+|.+.+++.+.+.+... .... +.. .+.+.++.+.+.+......+ .|.++++.+ |+.++++.. ..
T Consensus 58 ~~p~v~~Ai~~ql~~~~~---~~~~-~~~----~~~~~~la~~L~~~~p~~~~----~v~f~~sGsEAve~AlklAr~~t 125 (443)
T PRK08360 58 NNPRVVKAIKEQTDKLIH---YTPI-YGF----PVEPLLLAEKLIEIAPGDNP----KVSFGLSGSDANDGAIKFARAYT 125 (443)
T ss_pred CCHHHHHHHHHHHHhccC---cccc-ccC----cHHHHHHHHHHHHhCCCCCC----EEEEcCCHHHHHHHHHHHHHHhc
Confidence 478899998887765211 1110 111 12233355777777654322 367655555 777655533 23
Q ss_pred CCCeEEeccCCCCccc-Ccccc-----ccccccc-cceeeeEEEecccCC-CCCC--------CCHHHHHHHhhh----c
Q 023191 135 PHDRIMALDLPHGGHL-SHGYQ-----TDTKKIS-AVSIFFETMPYRLNE-STGY--------IDYDQLEKSATL----F 194 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~-~~~~~-----~~~~~~~-~~g~~~~~v~~~~~~-~~~~--------~d~e~l~~~i~~----~ 194 (286)
...+|+.....|.+.. ..... ..+.... ..+ +..+|++... ..+. -+++.+++.+.. .
T Consensus 126 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 203 (443)
T PRK08360 126 KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSD--VHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAE 203 (443)
T ss_pred CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCC--cEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCC
Confidence 4567777765555542 11000 0000000 111 2223322100 0010 234556666642 3
Q ss_pred CCcEEEEcCC-C-CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCCCCCCCC-cceEEEeCCCCCCCC-CCc
Q 023191 195 RPKLIVAGAS-A-YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSLRG-PRG 265 (286)
Q Consensus 195 ~tk~v~i~~~-n-~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~~~-~~D~v~~s~~K~l~g-p~g 265 (286)
++++|++.|. | .|...+ +++|.++|++||+++|+|++|. +|..........+. ..|+++ +.|.+++ .+.
T Consensus 204 ~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiit--lsK~l~~G~pi 281 (443)
T PRK08360 204 GVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIIT--LGKPLGGGLPI 281 (443)
T ss_pred CeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEE--ecccccCCcee
Confidence 6889998743 3 443333 8899999999999999999976 22221110000111 257664 4998864 345
Q ss_pred eEEEEecchhhhhc
Q 023191 266 AMIFFRKGVKEINK 279 (286)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (286)
|+++++.++.+...
T Consensus 282 gav~~~~~i~~~~~ 295 (443)
T PRK08360 282 SATIGRAEIMDSLP 295 (443)
T ss_pred EEEEEcHHHHhhhc
Confidence 89999888776654
No 338
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.50 E-value=2.9e-06 Score=79.05 Aligned_cols=197 Identities=12% Similarity=0.076 Sum_probs=104.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC-CChHHHHHHHHHh---c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL---L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~-sG~~a~~~~l~a~---~ 133 (286)
-+|++.+++.+.+.... ... .++ ..+.+..+.+++.+.+..+.+ .+.++ ||+.|+.++++.. .
T Consensus 99 ~~p~v~~Ai~~ql~~l~---~~~-~~~-----~~~~~~~lae~L~~~~p~~~~----~v~f~~SGsEAve~AlklAr~~t 165 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQP---LHS-QEL-----LDPLRAMLAKTLAALTPGKLK----YSFFCNSGTESVEAALKLAKAYQ 165 (459)
T ss_pred CCHHHHHHHHHHHhhCc---ccc-ccc-----CCHHHHHHHHHHHHhCCCCCC----EEEEeCCchHHHHHHHHHHHHHh
Confidence 37899999988776421 101 111 123333456777776643222 35555 5555777665533 2
Q ss_pred C-C-CCeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh-----cCCcEEEE
Q 023191 134 K-P-HDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVA 201 (286)
Q Consensus 134 ~-~-Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-----~~tk~v~i 201 (286)
. . ..+|+.....|.+...-.... ++....-....+..+| -.|.+++++.+.. .++.+|++
T Consensus 166 ~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~~~~~~~~iAavIv 237 (459)
T PRK11522 166 SPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVP--------FGNIEAMRTALSECKKTGDDVAAVIL 237 (459)
T ss_pred ccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccC--------CCCHHHHHHHHHHhhccCCcEEEEEE
Confidence 1 2 346787776665543111000 0000000000001111 1267888887752 24567777
Q ss_pred c--CCCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccC--CCCCCCCcceEEEeCCCCCCCCC--CceEEEE
Q 023191 202 G--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP--RGAMIFF 270 (286)
Q Consensus 202 ~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~l~gp--~gG~l~~ 270 (286)
. .++-|...| ++++.++|++||+++|+|++|. +|-.... .....+ ..|++ ++.|.++|. +-|.+++
T Consensus 238 Epv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDiv--t~gK~lggG~~Pigav~~ 314 (459)
T PRK11522 238 EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENV-QPDIL--CLAKALGGGVMPIGATIA 314 (459)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCC-CCCEE--EechhhhCCCccceeEEE
Confidence 5 334455555 9999999999999999999985 2211111 011111 26876 558999764 2366666
Q ss_pred ecchhhhh
Q 023191 271 RKGVKEIN 278 (286)
Q Consensus 271 ~~~~~~~~ 278 (286)
++++.+..
T Consensus 315 ~~~i~~~~ 322 (459)
T PRK11522 315 TEEVFSVL 322 (459)
T ss_pred cHHHHHHh
Confidence 66655543
No 339
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.50 E-value=7.2e-06 Score=75.55 Aligned_cols=205 Identities=13% Similarity=0.069 Sum_probs=104.4
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe--CCChHHHHHHHHHh--c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS--LSGSPSNFQVYTAL--L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~--~sG~~a~~~~l~a~--~ 133 (286)
-+|.+.+++.+.+.+.. +.....+ ..+.+..+.+++.+....+.+. ...+.+ .||+.++..+++.. .
T Consensus 52 ~~p~v~~ai~~ql~~~~---~~~~~~~-----~~~~~~~lae~l~~~~~~~~~~-~~~~~f~~~sGseA~e~AlklAr~~ 122 (412)
T TIGR02407 52 NNPKLKQALIDYLADDG---IIHSLDM-----ATEAKREFLETFNEIILKPRGL-DYKVQFPGPTGTNAVESALKLARKV 122 (412)
T ss_pred CCHHHHHHHHHHHhhcc---ceecccc-----CcHHHHHHHHHHHHhccCccCC-CceEEEeCCCchHHHHHHHHHHhhh
Confidence 47899999988775411 1110001 1122333556666653211100 012444 57877777665544 2
Q ss_pred CCCCeEEeccCCCCcccCcccc-----ccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh-----cCCcEEEEcC
Q 023191 134 KPHDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIVAGA 203 (286)
Q Consensus 134 ~~Gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~-----~~tk~v~i~~ 203 (286)
....+|+.....|.+...-... .++.........+..+|++.......-+++.+++.+.+ .++.+|++.|
T Consensus 123 tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Ep 202 (412)
T TIGR02407 123 TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILET 202 (412)
T ss_pred cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEecc
Confidence 3456788887666655311100 01111100000122233221000001246778888863 1457788752
Q ss_pred --CCCCC----ccCHHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCCCCC-C-CceEEEEec
Q 023191 204 --SAYAR----LYDYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRG-P-RGAMIFFRK 272 (286)
Q Consensus 204 --~n~g~----~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~g-p-~gG~l~~~~ 272 (286)
.+.|. ..-+++|.++|++||+++|.|+++. +|-....+ ....+ ..|++++ .|++++ . +-|++++++
T Consensus 203 i~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~--~K~lg~~G~pigav~~~~ 279 (412)
T TIGR02407 203 VQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCL--SKSISGYGLPLALTLIKP 279 (412)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEe--chhccCCccceeEEEEch
Confidence 22343 2338899999999999999999976 22211110 11111 2787765 499864 3 238888887
Q ss_pred ch
Q 023191 273 GV 274 (286)
Q Consensus 273 ~~ 274 (286)
++
T Consensus 280 ~~ 281 (412)
T TIGR02407 280 EL 281 (412)
T ss_pred hh
Confidence 76
No 340
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.50 E-value=2e-07 Score=79.68 Aligned_cols=203 Identities=12% Similarity=0.152 Sum_probs=127.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHH-HHHHhcCCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQ-VYTALLKPH 136 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~-~l~a~~~~G 136 (286)
+|+.+++.+.+.+.. |..-....++-+..++. ...+.+...++.+.|+..+ +|.+.+..+++++ ++.+|.+|-
T Consensus 79 mPK~t~~~~~~eLDk-Wak~av~gH~~GkvPW~-~~De~il~l~~~iVGA~e~----EvavmNsLTvNlh~Ll~sFyKPT 152 (465)
T KOG3846|consen 79 MPKSTRNSINAELDK-WAKCAVEGHFKGKVPWV-SIDEPILPLLAPIVGAQEN----EVAVMNSLTVNLHSLLISFYKPT 152 (465)
T ss_pred CchhhHhHHHHHHHH-HHhhhhhccccccccee-ecchhhhhhhhhhccCCch----hhhhHhhhhhHHHHHHHHhcCCc
Confidence 577777777666544 21110011111211221 1223356778889998764 4888888885554 566777775
Q ss_pred C---eEEeccCCCCcccCccccccccccccceeeeEEEecccCC--CCCCCCHHHHHHHhhhcC--CcEEEEcCCC--CC
Q 023191 137 D---RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE--STGYIDYDQLEKSATLFR--PKLIVAGASA--YA 207 (286)
Q Consensus 137 d---~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~~d~e~l~~~i~~~~--tk~v~i~~~n--~g 207 (286)
. +|+.-. .++.+-.|..+. .+++.|..++...+...+ ....+-.+++.+.|..+. ..+|+++... +|
T Consensus 153 ekR~KILlE~---kaFPSDhYAies-Q~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTG 228 (465)
T KOG3846|consen 153 EKRFKILLEK---KAFPSDHYAIES-QCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTG 228 (465)
T ss_pred chhhhhhhcc---CCCCchHHHHHh-hhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecc
Confidence 4 455444 333333343333 455666553332222222 223677888888887633 3445555333 67
Q ss_pred CccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCC-CCCc-eEEEEecc
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR-GPRG-AMIFFRKG 273 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~-gp~g-G~l~~~~~ 273 (286)
...++.+|...-+..|++|=.|-||+.|.++.-++.|+ +|+.+++.+|.++ |+.| |.+++..+
T Consensus 229 Q~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWg---VDFACWCSYKYlnaGaGgIgGlFvHek 293 (465)
T KOG3846|consen 229 QYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWG---VDFACWCSYKYLNAGAGGIGGLFVHEK 293 (465)
T ss_pred cccchhhhhhcccCCCcEechhhhhhhcCCceEEeecC---CceEEEeeecccccCCCccceeeeehh
Confidence 88899999866667799999999999999999999998 9999999999884 4555 77777654
No 341
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.49 E-value=6.9e-06 Score=77.41 Aligned_cols=92 Identities=17% Similarity=0.173 Sum_probs=60.0
Q ss_pred HHHHHHhhh---cCCcEEEEcC--CCCCCccC----HHHHHHHHHhcCCEEEEeccc-cccccccCC--CCCCCCcceEE
Q 023191 185 DQLEKSATL---FRPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAAGV--IPSPFEYADVV 252 (286)
Q Consensus 185 e~l~~~i~~---~~tk~v~i~~--~n~g~~~~----l~~I~~ia~~~~~~vivD~a~-~~g~~~~~~--~~~~~~~~D~v 252 (286)
+++++++.. .++.+|++.| .+-|...| +++|.++|++||+++|+|++| ++|-..... ....+ ..|++
T Consensus 247 ~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDiv 325 (504)
T PLN02760 247 DNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLV 325 (504)
T ss_pred HHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEE
Confidence 456766642 2466777763 33455555 999999999999999999998 455443211 11111 26765
Q ss_pred EeCCCCCCCCC--CceEEEEecchhhhhc
Q 023191 253 TTTTHKSLRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 253 ~~s~~K~l~gp--~gG~l~~~~~~~~~~~ 279 (286)
+ +.|.++|. +.|.+++++++.+..+
T Consensus 326 t--lgK~lggG~~PigAv~~~~~i~d~~~ 352 (504)
T PLN02760 326 S--LAKALSSAYMPIGAVLVSPEISDVIH 352 (504)
T ss_pred E--ecccccCCccccceEeecHHHHhhhh
Confidence 4 58999764 2366888888877664
No 342
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.47 E-value=1e-06 Score=86.93 Aligned_cols=163 Identities=19% Similarity=0.111 Sum_probs=103.7
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh-cC--CCCeEEeccCCCCcccCcccccccccccc
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LK--PHDRIMALDLPHGGHLSHGYQTDTKKISA 163 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~-~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
++.-+.--+.+..++++.|.+.. |--..-|++ +..+++++. .. ...+|++++..|+.+..... .-+..
T Consensus 120 QG~Lqal~e~Qtmi~~LtGm~va----NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~----t~~~~ 191 (954)
T PRK12566 120 QGRLEALLNFQQMTIDLTGLDLA----NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLR----TRAEG 191 (954)
T ss_pred hHHHHHHHHHHHHHHHHhCchhh----hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHH----Hhhhc
Confidence 34434334577999999999863 334444655 333333333 22 25789999877766543211 01222
Q ss_pred ceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC
Q 023191 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 242 (286)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~ 242 (286)
.|.+++ .+++++.+++ ++.+|++..+| +|.+.++++|++++|++|.++++ .+ ..+.+.+.
T Consensus 192 ~g~~i~--------------~~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~-~~---d~laL~ll 252 (954)
T PRK12566 192 FGFELV--------------VDAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACV-AA---DLLSLLVL 252 (954)
T ss_pred CCcEEE--------------EcchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEE-Ee---CHHHHhCC
Confidence 332222 1334445555 68889888666 78888999999999999998663 33 23344455
Q ss_pred CCCCC-cceEEEeCCC-----CCCCCCCceEEEEecchhhh
Q 023191 243 PSPFE-YADVVTTTTH-----KSLRGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 243 ~~~~~-~~D~v~~s~~-----K~l~gp~gG~l~~~~~~~~~ 277 (286)
..|.+ |+|++++++. -.|+||..|++.+++++...
T Consensus 253 ~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~ 293 (954)
T PRK12566 253 TPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRA 293 (954)
T ss_pred CChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhh
Confidence 55555 7999998765 46889988999999876543
No 343
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.46 E-value=1.2e-05 Score=74.74 Aligned_cols=207 Identities=16% Similarity=0.054 Sum_probs=107.2
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~--~~ 134 (286)
-.|.+.+++.+.+.... +....++ .+ +.+.++.+.+.+.+..... ..|.+++ |+.|+.++++.. ..
T Consensus 59 ~~p~v~~Ai~~ql~~~~---~~~~~~~-~~----~~~~~lae~L~~~~p~~~~---~~v~f~~SGseA~e~AiklAr~~t 127 (445)
T PRK08593 59 APPRVVEAIKAQADKFI---HYTPAYM-YH----EPLVRLAKKLCELAPGDFE---KRVTFGLSGSDANDGIIKFARAYT 127 (445)
T ss_pred CCHHHHHHHHHHHHhcc---Ccccccc-CC----HHHHHHHHHHHHhCCCCCC---CEEEECCchHHHHHHHHHHHHHhh
Confidence 37899999888776521 1110001 11 2233356777777643221 1477744 555877666533 22
Q ss_pred CCCeEEeccCCCCcccCccccc------ccc--ccccceeeeEEEecccCC-C-CCCCC-------HHHHHHHhhh----
Q 023191 135 PHDRIMALDLPHGGHLSHGYQT------DTK--KISAVSIFFETMPYRLNE-S-TGYID-------YDQLEKSATL---- 193 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~------~~~--~~~~~g~~~~~v~~~~~~-~-~~~~d-------~e~l~~~i~~---- 193 (286)
...+|+..+..|.+...-...+ ++. .....+ +..+|++-.. . ....+ ++++++.+..
T Consensus 128 gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
T PRK08593 128 GRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPG--FVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPA 205 (445)
T ss_pred CCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCC--cEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCC
Confidence 3456887776666543111100 000 000111 2223322100 0 00111 2445544431
Q ss_pred cCCcEEEEcCC--CCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCCCCCC-
Q 023191 194 FRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLRGP- 263 (286)
Q Consensus 194 ~~tk~v~i~~~--n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~gp- 263 (286)
.++.+|++.|- +.|...+ +++|.++|++||+++|+|++|. +|-..... ....+ ..|++ ++.|.++|.
T Consensus 206 ~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~--t~gK~l~~G~ 282 (445)
T PRK08593 206 DEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLM--SFGKSLAGGM 282 (445)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEe--eecccccCCc
Confidence 35778888633 2344434 9999999999999999999974 33221100 11111 25766 568988653
Q ss_pred CceEEEEecchhhhhcc
Q 023191 264 RGAMIFFRKGVKEINKQ 280 (286)
Q Consensus 264 ~gG~l~~~~~~~~~~~~ 280 (286)
+.|++++++++.+..+.
T Consensus 283 p~gav~~~~~i~~~~~~ 299 (445)
T PRK08593 283 PMSAIVGRKEIMESLEA 299 (445)
T ss_pred ccEEEEEcHHHHhhhcc
Confidence 45889999888776643
No 344
>PRK06062 hypothetical protein; Provisional
Probab=98.46 E-value=5.7e-06 Score=77.03 Aligned_cols=205 Identities=12% Similarity=0.043 Sum_probs=108.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~--~~ 134 (286)
-.|++.+++.+.+.... +... .+ ..+.+.++.+++.++..-..+ .|.+++ |+.|+.++++.. ..
T Consensus 70 ~~p~v~~Ai~~q~~~~~---~~~~-~~-----~~~~~~~lae~L~~~~p~~~~----~v~f~~SGsEAve~AlklAr~~t 136 (451)
T PRK06062 70 QHPKVVAAIQEQAARLC---TVAP-AH-----ANDARSEAARLIAERAPGDLS----KVFFTNGGADANEHAVRMARLHT 136 (451)
T ss_pred CCHHHHHHHHHHHHhcC---CcCC-cc-----CCHHHHHHHHHHHHhCCCCCC----EEEEcCChHHHHHHHHHHHHHhh
Confidence 37889999888775421 1000 11 112233355777776643222 366655 554777666543 23
Q ss_pred CCCeEEeccCCCCcccCccccc-----ccc-ccccceeeeEEEecccCC-CCC--CCC-------HHHHHHHhhh---cC
Q 023191 135 PHDRIMALDLPHGGHLSHGYQT-----DTK-KISAVSIFFETMPYRLNE-STG--YID-------YDQLEKSATL---FR 195 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~-----~~~-~~~~~g~~~~~v~~~~~~-~~~--~~d-------~e~l~~~i~~---~~ 195 (286)
...+|+.....|.+...-.... ... .....+ +..++.+... ..+ .-| ++++++++.. .+
T Consensus 137 gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~ 214 (451)
T PRK06062 137 GRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAG--VVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPST 214 (451)
T ss_pred CCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCC--CEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCc
Confidence 4567888876666553111000 000 000111 1112211100 001 012 6778887753 24
Q ss_pred CcEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccC--CCCCCCCcceEEEeCCCCCCCCC--C
Q 023191 196 PKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRGP--R 264 (286)
Q Consensus 196 tk~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~l~gp--~ 264 (286)
+.+|++. ..+-|...+ +++|.++|++||+++|+|++|. +|-.... ....++ ..|+++ +.|.++|. +
T Consensus 215 iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t--~gK~lggG~~P 291 (451)
T PRK06062 215 IAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLIT--FAKGVNSGYVP 291 (451)
T ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeee--echhhhcCCcC
Confidence 6778886 333455555 9999999999999999999986 2211111 011111 267664 58999774 2
Q ss_pred ceEEEEecchhhhhcc
Q 023191 265 GAMIFFRKGVKEINKQ 280 (286)
Q Consensus 265 gG~l~~~~~~~~~~~~ 280 (286)
-|.+++++++.+...+
T Consensus 292 igav~~~~~i~~~~~~ 307 (451)
T PRK06062 292 LGGVAISEAIAATFAD 307 (451)
T ss_pred cEEEEEcHHHHHHhcc
Confidence 3666677787776653
No 345
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.44 E-value=3.2e-07 Score=81.74 Aligned_cols=168 Identities=17% Similarity=0.095 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH--HHHHHHHHhc--CCCCeEEeccCCCCcccCccccccccccccce
Q 023191 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (286)
Q Consensus 90 ~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~--a~~~~l~a~~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (286)
+..|-..+...+-+..|+..-. ..+++..++ .+.+.+.++- ..++.|+.+..+|.+.+- .+..+|
T Consensus 54 ~~~ltn~l~~d~~~~~G~~~~~---~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~k--------ai~~AG 122 (389)
T PF05889_consen 54 LAKLTNSLVLDALRLAGLRSVK---SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFK--------AIERAG 122 (389)
T ss_dssp HHHHHHHHHHHHHHHTTHTTHC---EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHH--------HHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCcccc---ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHH--------HHHhcC
Confidence 3444444445555677885322 355555555 3333555553 567888888876665433 456778
Q ss_pred eeeEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc-CCC-CCCccC-HHHHHHHHHhcCCEEEEeccccccccc--
Q 023191 166 IFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG-ASA-YARLYD-YERIRKVCNKQKAIMLADMAHISGLVA-- 238 (286)
Q Consensus 166 ~~~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~-~~n-~g~~~~-l~~I~~ia~~~~~~vivD~a~~~g~~~-- 238 (286)
.++++++....++....|++.+++.+++. ++.+.+++ .+- .|+..| +++|+++|++||++.++-+|++.-...
T Consensus 123 l~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~ 202 (389)
T PF05889_consen 123 LEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCM 202 (389)
T ss_dssp -EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHH
T ss_pred CeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHH
Confidence 87888875444344467899999988653 23455555 333 666666 999999999999999999997651110
Q ss_pred ----cCCCCCCCCcceEEEeCCCCCCCCCCceEEEEe
Q 023191 239 ----AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFR 271 (286)
Q Consensus 239 ----~~~~~~~~~~~D~v~~s~~K~l~gp~gG~l~~~ 271 (286)
....... .|+++-|+.|.|-.|-||.++..
T Consensus 203 ~~i~~a~~~GR---vda~vqS~dkNF~VPvGgai~As 236 (389)
T PF05889_consen 203 HLIQQAWRVGR---VDAFVQSTDKNFMVPVGGAIMAS 236 (389)
T ss_dssp HHHHHHHHHST---CSEEEEEHHHHHCEESSHEEEEE
T ss_pred HHHHHHHhcCC---cceeeeecCCCEEecCCCcEEEe
Confidence 0001112 78999999999989988444443
No 346
>PRK06105 aminotransferase; Provisional
Probab=98.42 E-value=1.1e-05 Score=75.33 Aligned_cols=208 Identities=12% Similarity=0.033 Sum_probs=108.5
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-+|++.+++.+.+.+.. +... .. ....+.+.++.+++.+++..+.+ .|.+ .||+.|+.++++...
T Consensus 65 ~~p~i~~Ai~~q~~~~~---~~~~--~~--~~~~~~~~~lae~L~~~~p~~~~----~v~f~~SGseAve~AlKlar~~~ 133 (460)
T PRK06105 65 SEQRLVEAAARQMKKLP---FYHT--FS--HKSHGPVIDLAEKLVAMAPVPMS----KVFFTNSGSEANDTVVKLVWYYN 133 (460)
T ss_pred CCHHHHHHHHHHHHhCC---Ceec--cc--ccCCHHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 47899999988876521 1000 00 01112233356777777653332 3665 555558876666531
Q ss_pred -----CCCCeEEeccCCCCcccCccccc-----cccccccceeeeEEEecccCCC---CC-------CCCHHHHHHHhhh
Q 023191 134 -----KPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNES---TG-------YIDYDQLEKSATL 193 (286)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~---~~-------~~d~e~l~~~i~~ 193 (286)
....+|+.....|.+...-...+ ++......-..+..++.+.... .+ ...++++++++..
T Consensus 134 ~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~ 213 (460)
T PRK06105 134 NALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILA 213 (460)
T ss_pred HhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHH
Confidence 12357887776665543111100 0000000000011122210000 00 0124567777742
Q ss_pred ---cCCcEEEEcC--CCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCCCC
Q 023191 194 ---FRPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLR 261 (286)
Q Consensus 194 ---~~tk~v~i~~--~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~ 261 (286)
.++.+|++.| .+.|...+ ++++.++|++||+++|.|++|. +|-....+ ....+ ..|++ ++.|.++
T Consensus 214 ~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~--~~gK~lg 290 (460)
T PRK06105 214 EGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDIL--VMSKQLS 290 (460)
T ss_pred cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCee--eeecccc
Confidence 2567888863 23444444 8999999999999999999983 54432111 11111 26766 4579887
Q ss_pred CC--CceEEEEecchhhhhc
Q 023191 262 GP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 262 gp--~gG~l~~~~~~~~~~~ 279 (286)
|. +.|++++++++.+...
T Consensus 291 gG~~P~~av~~~~~i~~~~~ 310 (460)
T PRK06105 291 SSYQPLSAVLMNEKVYDPIA 310 (460)
T ss_pred cCcccceEEEEcHHHHHHHh
Confidence 65 3588888888776543
No 347
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.40 E-value=9.5e-07 Score=69.73 Aligned_cols=62 Identities=10% Similarity=0.013 Sum_probs=50.9
Q ss_pred cCCcchHHHHHHHHHHHHHHHCC--CCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCC
Q 023191 84 YGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHG 147 (286)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~~g--~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~ 147 (286)
|+...+..++++++++++.+.+| ++.+. .+|++|+|++ ++..++.++++|||.|++++|.|+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p--d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDA--DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccch--hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 45557788999999999999988 43222 3699999999 888899999999999999995553
No 348
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.40 E-value=6.6e-06 Score=76.03 Aligned_cols=207 Identities=14% Similarity=0.057 Sum_probs=108.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-.|++.+++.+.+..... .....+ . .+...++.+++.+.+..+.+ .+.+ .||+.|+.++++...
T Consensus 60 ~~p~i~~Ai~~q~~~~~~---~~~~~~-~----~~~~~~la~~L~~~~p~~~~----~v~f~~SGsEAve~AlklAr~~~ 127 (428)
T PRK07986 60 NHPQLNAAMKSQIDAMSH---VMFGGI-T----HPPAIELCRKLVAMTPQPLE----CVFLADSGSVAVEVAMKMALQYW 127 (428)
T ss_pred CCHHHHHHHHHHHhhcCC---cccccc-C----CHHHHHHHHHHHhhCCCCcC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 368899999887765211 000000 1 12233356777777653322 3555 456667776655331
Q ss_pred ----CCCCeEEeccCCCCcccCccccc------cccccccceeeeEEEecccCC--CCC-CCCHHHHHHHhhh--cCCcE
Q 023191 134 ----KPHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLNE--STG-YIDYDQLEKSATL--FRPKL 198 (286)
Q Consensus 134 ----~~Gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~~--~~~-~~d~e~l~~~i~~--~~tk~ 198 (286)
....+|+.....|.+...-.... ++....-.-.....++.+... +.+ .-|++++++.+.. .+..+
T Consensus 128 ~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaa 207 (428)
T PRK07986 128 QAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAA 207 (428)
T ss_pred HhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEE
Confidence 23467888887666532110000 000000000001112221110 001 1256788887753 14567
Q ss_pred EEEcC--CCCC-C----ccCHHHHHHHHHhcCCEEEEeccccccccccC-C---CCCCCCcceEEEeCCCCCCCCC--Cc
Q 023191 199 IVAGA--SAYA-R----LYDYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLRGP--RG 265 (286)
Q Consensus 199 v~i~~--~n~g-~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~---~~~~~~~~D~v~~s~~K~l~gp--~g 265 (286)
|++.| +..| . ...+++|.++|++||+++|+|++| .|.-..+ . ....+ ..|+++ +.|.++|. ..
T Consensus 208 vi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv-~PDi~t--~gK~l~gG~~p~ 283 (428)
T PRK07986 208 VILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGI-APDILC--LGKALTGGTMTL 283 (428)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCC-CCCEEE--echhhhCCcccC
Confidence 77764 3333 2 234899999999999999999998 4431111 1 11111 267775 68988654 23
Q ss_pred eEEEEecchhhhhcc
Q 023191 266 AMIFFRKGVKEINKQ 280 (286)
Q Consensus 266 G~l~~~~~~~~~~~~ 280 (286)
|++++++++.+..+.
T Consensus 284 ~av~~~~~i~~~~~~ 298 (428)
T PRK07986 284 SATLTTREVAETISN 298 (428)
T ss_pred cchhchHHHHHHhhc
Confidence 777888888777654
No 349
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.39 E-value=2.9e-06 Score=76.09 Aligned_cols=207 Identities=12% Similarity=0.065 Sum_probs=106.4
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhc----
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL---- 133 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~---- 133 (286)
+|.+.+++.+.+.... +... . ....+...++.+++.+.++-.. ..+.++++.+ |+..++....
T Consensus 34 ~p~i~~ai~~~~~~~~---~~~~---~--~~~~~~~~~la~~L~~~~p~~~----~~v~f~~sGseAve~Alkla~~~~~ 101 (339)
T PF00202_consen 34 HPEIAEAIAEQANKLN---YVSF---S--GFTHPEAAELAEKLAELFPGGL----DRVFFANSGSEAVEAALKLARQYHN 101 (339)
T ss_dssp -HHHHHHHHHHHHHCS---SCST---T--TSEEHHHHHHHHHHHHHSSTTE----EEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHhhhcc---cccc---c--ceeccchhhhhhhhhhcccccc----ceeeeccCchHHHHHHHHHhhcccc
Confidence 6888888887765421 1000 0 0111223346688888873322 2466655555 7776665444
Q ss_pred ----CCCCeEEeccCCCCcccCcccc-----ccccccccceeeeEEEecccCCCC---CCCCHHHHHHHh---hhcCCcE
Q 023191 134 ----KPHDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLNEST---GYIDYDQLEKSA---TLFRPKL 198 (286)
Q Consensus 134 ----~~Gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~~~~---~~~d~e~l~~~i---~~~~tk~ 198 (286)
....+|+.+...|.+...-... .++.........+..+|++.. .. ..-..+++++.+ ...+..+
T Consensus 102 ~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~iaa 180 (339)
T PF00202_consen 102 KRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDP-AADEEEQACLNALEELIAALNADEIAA 180 (339)
T ss_dssp HTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCH-HHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred cccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCcc-chhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 2446888888777654311111 011110000011223432210 00 000011122222 2336678
Q ss_pred EEEcCCC--CCC----ccCHHHHHHHHHhcCCEEEEeccccccccccCCC---CCCCCcceEEEeCCCCCCCCCCc-eEE
Q 023191 199 IVAGASA--YAR----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG-AMI 268 (286)
Q Consensus 199 v~i~~~n--~g~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~---~~~~~~~D~v~~s~~K~l~gp~g-G~l 268 (286)
|++.|-. .|. ..-+++|.++|++||+++|+|+.+..-....... ...+ ..|+++++ |.++|.-. |.+
T Consensus 181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav 257 (339)
T PF00202_consen 181 VIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAV 257 (339)
T ss_dssp EEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEE
T ss_pred EEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccc
Confidence 8886433 342 2238999999999999999999976221111111 0111 27999886 99966544 999
Q ss_pred EEecchhhhhccC
Q 023191 269 FFRKGVKEINKQG 281 (286)
Q Consensus 269 ~~~~~~~~~~~~~ 281 (286)
++++++.+....+
T Consensus 258 ~~~~~i~~~~~~~ 270 (339)
T PF00202_consen 258 LGSEEIMEAFQPG 270 (339)
T ss_dssp EEEHHHHTTSCTT
T ss_pred cccchhhcccccc
Confidence 9999988777543
No 350
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.38 E-value=1.6e-05 Score=73.64 Aligned_cols=197 Identities=13% Similarity=0.092 Sum_probs=107.5
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~--~~ 134 (286)
-.|.+.+++.+.+......+ ..+ +.+.++.+++.+.+. ..+ .+.+++ |+.|+..+++.. ..
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~-------~~~----~~~~~la~~l~~~~p-~~~----~v~f~~sGseA~e~AlklAr~~t 133 (428)
T PRK12389 70 AHPHITKAITEAAENGVLYG-------TPT----ELEIEFAKMLKEAIP-SLE----KVRFVNSGTEAVMTTIRVARAYT 133 (428)
T ss_pred CCHHHHHHHHHHHHhCCccC-------CCC----HHHHHHHHHHHHhCC-CCc----EEEEeCCHHHHHHHHHHHHHHhh
Confidence 37889999988776521101 111 222335567766654 222 366655 554777666533 23
Q ss_pred CCCeEEeccCCCCcccCccccc-ccccc-----ccceee----eEEEecccCCCCCCCCHHHHHHHhhhc--CCcEEEEc
Q 023191 135 PHDRIMALDLPHGGHLSHGYQT-DTKKI-----SAVSIF----FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG 202 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~-~~~~~-----~~~g~~----~~~v~~~~~~~~~~~d~e~l~~~i~~~--~tk~v~i~ 202 (286)
...+|+.....|.+........ ..... ...+.. .....++ ..|++.+++.+.++ ++.+|++.
T Consensus 134 gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 134 GRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP------FNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred CCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcC------CCCHHHHHHHHHhcCCcEEEEEEe
Confidence 4567888776666643211100 00000 000000 0001111 12789998888642 46677776
Q ss_pred --CCCCCCccC----HHHHHHHHHhcCCEEEEeccccccccccCC-C-CCCCCcceEEEeCCCCCCCCCCc-eEEEEecc
Q 023191 203 --ASAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-I-PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (286)
Q Consensus 203 --~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~-~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~ 273 (286)
..+.|...| +++|.++|++||+++|.|++|...-..... . ...+ ..|++ ++.|.++|... |.++++++
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv-~PDiv--t~gK~lggG~Pi~av~~~~~ 284 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGV-EPDLT--ALGKIIGGGLPIGAYGGRKD 284 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCC-CCCee--eechhhcCCCceeEEeEHHH
Confidence 333455555 999999999999999999998632111010 1 0111 26775 55898866433 66788888
Q ss_pred hhhhhc
Q 023191 274 VKEINK 279 (286)
Q Consensus 274 ~~~~~~ 279 (286)
+.+..+
T Consensus 285 i~~~~~ 290 (428)
T PRK12389 285 IMEQVA 290 (428)
T ss_pred HHhhhc
Confidence 877664
No 351
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.37 E-value=1.5e-05 Score=73.64 Aligned_cols=209 Identities=13% Similarity=0.092 Sum_probs=107.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC-CCCCcceeEEeCCChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~v~~~sG~~a~~~~l~a~--~~ 134 (286)
-.|++.+++.+.+.+.....+. . ..+ +...++.+++.+.+.. ..+. -.+.+||+.|+..+++.. ..
T Consensus 57 ~~p~v~~ai~~ql~~~~~~~~~---~-~~~----~~~~~la~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK06777 57 RHPKVVAAVRQQLDQFTHTAYQ---I-VPY----ASYVTLAERINALAPIDGPAK---TAFFTTGAEAVENAVKIARAYT 125 (421)
T ss_pred CCHHHHHHHHHHHhhccccccc---c-cCC----hHHHHHHHHHHHhCCCCCCce---EEEeCCcHHHHHHHHHHHHHhh
Confidence 3788888888877652110110 0 111 1222355677776642 1222 244566666777655533 23
Q ss_pred CCCeEEeccCCCCcccCccccc------cccccccceeeeEEEecccCCC--CCCCCHHHHHHHhhh----cCCcEEEEc
Q 023191 135 PHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLNES--TGYIDYDQLEKSATL----FRPKLIVAG 202 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~~~--~~~~d~e~l~~~i~~----~~tk~v~i~ 202 (286)
...+|+.....|.+...-...+ ++....-.-..+..++++.... ...-+++.+++.+.. .++.+|++.
T Consensus 126 gr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~E 205 (421)
T PRK06777 126 GRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLE 205 (421)
T ss_pred CCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEEC
Confidence 4456888876666553111100 0000000000011122221000 011246677877752 256778886
Q ss_pred CC--CCC-CccC---HHHHHHHHHhcCCEEEEeccccccccccCC-CC-CCCC-cceEEEeCCCCCCCC-CCceEEEEec
Q 023191 203 AS--AYA-RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRG-PRGAMIFFRK 272 (286)
Q Consensus 203 ~~--n~g-~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~-~~~~-~~D~v~~s~~K~l~g-p~gG~l~~~~ 272 (286)
|- +.| ...+ +++|.++|++||+++|+|++|. |....+. .. ..+. ..|++ ++.|.+++ .+.|++++++
T Consensus 206 pv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~pigav~~~~ 282 (421)
T PRK06777 206 PIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMPISAVVGRA 282 (421)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCceEEEEEcH
Confidence 32 234 2334 8999999999999999999976 4321121 11 0011 26765 57998853 3459999998
Q ss_pred chhhhhcc
Q 023191 273 GVKEINKQ 280 (286)
Q Consensus 273 ~~~~~~~~ 280 (286)
++.+...+
T Consensus 283 ~i~~~~~~ 290 (421)
T PRK06777 283 EVMDAPAP 290 (421)
T ss_pred HHHhccCC
Confidence 87766543
No 352
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.32 E-value=1.5e-05 Score=73.77 Aligned_cols=208 Identities=13% Similarity=0.050 Sum_probs=109.4
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-+|.+.+++.+.+.. .. +.....+.. + .. ..+.+++.+.++...+ .+.+ .+|+.++..+++...
T Consensus 62 ~~p~v~~ai~~~~~~-~~--~~~~~~~~~-~--~~--~~la~~l~~~~~~~~~----~v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 62 NHPRLNAAAQKQIDK-MS--HVMFGGFTH-K--PA--IELCQKLVKMTPNALD----CVFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCHHHHHHHHHHHHh-cC--CccccccCC-H--HH--HHHHHHHHhhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 478889888887754 21 100000111 1 12 2255777777653322 3555 456667766555332
Q ss_pred ----CC-CCeEEeccCCCCcccCccccc-cccc-c-c-ccee--eeEEEecccCCCC--C-CCCHHHHHHHhhhc--CCc
Q 023191 134 ----KP-HDRIMALDLPHGGHLSHGYQT-DTKK-I-S-AVSI--FFETMPYRLNEST--G-YIDYDQLEKSATLF--RPK 197 (286)
Q Consensus 134 ----~~-Gd~Vl~~~~~~~~~~~~~~~~-~~~~-~-~-~~g~--~~~~v~~~~~~~~--~-~~d~e~l~~~i~~~--~tk 197 (286)
.+ ..+|+.....|.+...-...+ .... . . +.+. ....++.+...-. + .-|++++++.+... +..
T Consensus 130 ~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~va 209 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIA 209 (427)
T ss_pred HhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEE
Confidence 12 367888887776653111100 0000 0 0 0000 0111221111000 0 12567777777532 456
Q ss_pred EEEEcC--CCCC-----CccCHHHHHHHHHhcCCEEEEeccccccccccCC--CCCCCC-cceEEEeCCCCCCCCC--Cc
Q 023191 198 LIVAGA--SAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV--IPSPFE-YADVVTTTTHKSLRGP--RG 265 (286)
Q Consensus 198 ~v~i~~--~n~g-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~--~~~~~~-~~D~v~~s~~K~l~gp--~g 265 (286)
+|++.| ++.| ...++++|.++|++||+++|+|++| .|.-..+. ....+. ..|+++ +.|.|+|. ..
T Consensus 210 avivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG~~p~ 286 (427)
T TIGR00508 210 AVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKALTGGYMTL 286 (427)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhhhcCcccc
Confidence 777764 4444 3456999999999999999999998 44311111 010111 368776 59998654 24
Q ss_pred eEEEEecchhhhhcc
Q 023191 266 AMIFFRKGVKEINKQ 280 (286)
Q Consensus 266 G~l~~~~~~~~~~~~ 280 (286)
+.+++++++.+..+.
T Consensus 287 ~a~~~~~~~~~~~~~ 301 (427)
T TIGR00508 287 SATVTTDKVAQTISS 301 (427)
T ss_pred eEEEEcHHHHHHHhc
Confidence 778888888777664
No 353
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.31 E-value=3.6e-05 Score=71.60 Aligned_cols=207 Identities=17% Similarity=0.129 Sum_probs=105.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC-CChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~-sG~~a~~~~l~a~~--- 133 (286)
-.|.+.+++.+.+.+.. +.....+. . +....+.+++.+.+....+ .|.++ ||+.|+..++....
T Consensus 66 ~~p~v~~ai~~ql~~l~---~~~~~~~~-~----~~~~~la~~L~~~~p~~~~----~v~f~~sGseAve~AlklAr~~~ 133 (445)
T PRK09221 66 GRPEIVEAVARQAATLD---YAPAFQMG-H----PLAFELAERLAELAPGGLD----HVFFTNSGSESVDTALKIALAYH 133 (445)
T ss_pred CCHHHHHHHHHHHHhcc---CccccccC-C----HHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 47888888888775421 10000011 1 2223355777777643222 35554 45557776555331
Q ss_pred ---C--CCCeEEeccCCCCcccCccc-----cccccccccceeeeEEEecccCCC--CCC--------CCHHHHHHHhhh
Q 023191 134 ---K--PHDRIMALDLPHGGHLSHGY-----QTDTKKISAVSIFFETMPYRLNES--TGY--------IDYDQLEKSATL 193 (286)
Q Consensus 134 ---~--~Gd~Vl~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~v~~~~~~~--~~~--------~d~e~l~~~i~~ 193 (286)
. ...+|+.....|.+...-.. ..++....-....+..+|.+.+.. .+. -..+++++.+..
T Consensus 134 ~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 213 (445)
T PRK09221 134 RARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVAL 213 (445)
T ss_pred HhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHh
Confidence 1 13578888776665421000 000100000000112222221000 010 114577777753
Q ss_pred ---cCCcEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCCCC
Q 023191 194 ---FRPKLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLR 261 (286)
Q Consensus 194 ---~~tk~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l~ 261 (286)
.++.+|++. .++.|...+ +++|.++|++||+++|+|++|. +|-..... ....+ ..|++ ++.|.++
T Consensus 214 ~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi~--~~gK~l~ 290 (445)
T PRK09221 214 HDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDII--TFAKGLT 290 (445)
T ss_pred cCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCEE--Eeccccc
Confidence 246678886 333555555 9999999999999999999984 33221111 11111 25765 4578876
Q ss_pred CC--CceEEEEecchhhhhc
Q 023191 262 GP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 262 gp--~gG~l~~~~~~~~~~~ 279 (286)
|. +.|.+++++++.+...
T Consensus 291 gG~~Pi~av~~~~~i~~~~~ 310 (445)
T PRK09221 291 NGAIPMGAVIASDEIYDAFM 310 (445)
T ss_pred cCcccceeeEEcHHHHHhhc
Confidence 43 3577788888776554
No 354
>PRK07482 hypothetical protein; Provisional
Probab=98.30 E-value=2.8e-05 Score=72.63 Aligned_cols=206 Identities=16% Similarity=0.034 Sum_probs=106.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-.|++.+++.+.+.... +... +.. ...+.+..+.+.+.+....+.+ .+.+ .||+.|+.++++...
T Consensus 67 ~~p~v~~Av~~q~~~~~---~~~~--~~~--~~~~~~~~lAe~L~~~~p~~~~----~v~f~~sGSEAve~AlKlAr~~~ 135 (461)
T PRK07482 67 GRTEVAEAIAEQAKELA---YYHT--YVG--HGTEASITLSKRIIDRAPAGMS----KVYYGLSGSDANETQIKLVWYYN 135 (461)
T ss_pred CCHHHHHHHHHHHHhcC---cccc--ccc--cCCHHHHHHHHHHHHhCCCCcC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 37899999988776521 1000 000 1112333366777776643332 3655 455557776655431
Q ss_pred ---C-C-CCeEEeccCCCCcccCcccc-----cccccc--ccceeeeEEEecccC-C-C--C-----C-CCCHHHHHHHh
Q 023191 134 ---K-P-HDRIMALDLPHGGHLSHGYQ-----TDTKKI--SAVSIFFETMPYRLN-E-S--T-----G-YIDYDQLEKSA 191 (286)
Q Consensus 134 ---~-~-Gd~Vl~~~~~~~~~~~~~~~-----~~~~~~--~~~g~~~~~v~~~~~-~-~--~-----~-~~d~e~l~~~i 191 (286)
. + ..+|+.....|.+...-... .++... ...+ +..++.+.. . . . + .-+++.+++.+
T Consensus 136 ~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 213 (461)
T PRK07482 136 NVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIAR--VLHTEAPHYYRRADAGMSEEQFSAYCADELEELI 213 (461)
T ss_pred HhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCC--CEEcCCCccccccccCCCHHHHHHHHHHHHHHHH
Confidence 1 2 35788887666664210000 000000 0011 111221110 0 0 0 0 11467788877
Q ss_pred hh---cCCcEEEEcCCC--CCCc----cCHHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCC
Q 023191 192 TL---FRPKLIVAGASA--YARL----YDYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKS 259 (286)
Q Consensus 192 ~~---~~tk~v~i~~~n--~g~~----~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~ 259 (286)
.. .++.+|++.|-. .|.. .-+++|.++|++||+++|.|+.+. +|-..... ...++ ..|++++ .|.
T Consensus 214 ~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKg 290 (461)
T PRK07482 214 LAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITV--AKG 290 (461)
T ss_pred HhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEE--ccc
Confidence 42 256788886332 3322 238899999999999999999975 22221111 11111 2788875 798
Q ss_pred CCCCC--ceEEEEecchhhhhc
Q 023191 260 LRGPR--GAMIFFRKGVKEINK 279 (286)
Q Consensus 260 l~gp~--gG~l~~~~~~~~~~~ 279 (286)
++|.. -|.+++++++.+...
T Consensus 291 l~gG~~Pi~av~~~~~i~~~~~ 312 (461)
T PRK07482 291 LTSAYAPLSGSIVGEKVWDVLE 312 (461)
T ss_pred cccCccccceeeecHHHHHHHh
Confidence 86643 377777777766543
No 355
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.29 E-value=7.5e-06 Score=71.62 Aligned_cols=100 Identities=17% Similarity=0.234 Sum_probs=71.5
Q ss_pred CCCCHHHHHHHhhhc---CCcEEEEc-CCC--CC---CccCHHHHHHHHHhcCCEEEEeccccccccc-c-----CCCCC
Q 023191 180 GYIDYDQLEKSATLF---RPKLIVAG-ASA--YA---RLYDYERIRKVCNKQKAIMLADMAHISGLVA-A-----GVIPS 244 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~---~tk~v~i~-~~n--~g---~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~-----~~~~~ 244 (286)
+.+|++.|+++|++. +.-.|+++ ..| -| +..+++++.+||++|++.++.|.+..+-.-. . +-..+
T Consensus 167 Gd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~ 246 (471)
T COG3033 167 GNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDW 246 (471)
T ss_pred CccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccc
Confidence 579999999999763 45566665 344 23 3457889999999999999999996643221 1 11111
Q ss_pred C--------CCcceEEEeCCCCCCCCCCceEEEEecc-hhhhhc
Q 023191 245 P--------FEYADVVTTTTHKSLRGPRGAMIFFRKG-VKEINK 279 (286)
Q Consensus 245 ~--------~~~~D~v~~s~~K~l~gp~gG~l~~~~~-~~~~~~ 279 (286)
. +.++|-++.|+-|--..+-||+|+.+++ +.|...
T Consensus 247 sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~fDvy~ 290 (471)
T COG3033 247 SIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSFFDVYE 290 (471)
T ss_pred cHHHHHHHHHhhhhhheeeccccceeccccEEEecCccHHHHHH
Confidence 1 1358999999999877889999999986 445544
No 356
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.28 E-value=2.9e-05 Score=72.46 Aligned_cols=203 Identities=13% Similarity=0.050 Sum_probs=105.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC-CChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~-sG~~a~~~~l~a~--~~ 134 (286)
-.|++.+++.+.+.+.. +.... +..+ +...++.+.+.+......+ .|.++ ||+.|+.++++.. ..
T Consensus 70 ~~p~i~~Ai~~ql~~~~---~~~~~-~~~~----~~~~~lae~L~~~~p~~~~----~v~f~~SGsEA~e~AlklAr~~t 137 (457)
T PRK05639 70 SHPKLVKAVQEQVALIQ---HSMIG-YTHS----ERAIRVAEKLAEISPIENP----KVLFGLSGSDAVDMAIKVSKFST 137 (457)
T ss_pred CCHHHHHHHHHHHHhcc---ccccC-ccCC----HHHHHHHHHHHhhCCCCcC----EEEEeCchHHHHHHHHHHHHHhc
Confidence 47889999888776421 11100 1111 2222355777776653322 35555 4555777655543 33
Q ss_pred CCCeEEeccCCCCcccCcccc------ccccccccceeeeEEEecccCCC-CCC----CCH--------HHHHHHhh---
Q 023191 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNES-TGY----IDY--------DQLEKSAT--- 192 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~-~~~----~d~--------e~l~~~i~--- 192 (286)
...+|+.....|.+...-... .++....-.-..+..+|++.... .+. -|. +.+++.+.
T Consensus 138 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 217 (457)
T PRK05639 138 RRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHV 217 (457)
T ss_pred CCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 456788777666654311000 01111000000122333321000 000 122 23444432
Q ss_pred --hcCCcEEEEcCCC--CCCcc----CHHHHHHHHHhcCCEEEEeccccccccccC-C---CCCCCCcceEEEeCCCCCC
Q 023191 193 --LFRPKLIVAGASA--YARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSL 260 (286)
Q Consensus 193 --~~~tk~v~i~~~n--~g~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~---~~~~~~~~D~v~~s~~K~l 260 (286)
..++.+|++.|-. -|... -+++|.++|++||+++|.|++|. |.--.+ . ....+ ..|+++ +.|.+
T Consensus 218 ~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv-~PDiv~--~gK~l 293 (457)
T PRK05639 218 VPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEV-KPDLII--FGKGV 293 (457)
T ss_pred cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCC-CCCEEE--echhh
Confidence 2367888886322 33222 38899999999999999999986 431111 1 11111 278888 68999
Q ss_pred CCCCc-eEEEEecchhh
Q 023191 261 RGPRG-AMIFFRKGVKE 276 (286)
Q Consensus 261 ~gp~g-G~l~~~~~~~~ 276 (286)
+|... |++++++++.+
T Consensus 294 ~gG~pi~av~~~~~i~~ 310 (457)
T PRK05639 294 ASGMGLSGVIGRKELMD 310 (457)
T ss_pred cCCCcceeEEehHHHHh
Confidence 76556 89999988776
No 357
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.26 E-value=3.7e-05 Score=71.07 Aligned_cols=206 Identities=11% Similarity=0.032 Sum_probs=105.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCC-CCCCcceeEEe-CCChHHHHHHHHHh--c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQS-LSGSPSNFQVYTAL--L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~v~~-~sG~~a~~~~l~a~--~ 133 (286)
-.|++.+++.+.+......++. . ... +.+.++.+++.+.... ..+ .+.+ +||+.|+.++++.. .
T Consensus 50 ~~p~v~~a~~~ql~~~~~~~~~---~-~~~----~~~~~la~~l~~~~p~~~~~----~v~f~~sGseA~e~AlklAr~~ 117 (420)
T TIGR00700 50 SHPRVVDAVRTQVAEFTHTCFM---V-TPY----EGYVALAEKLNRIAPGSGPK----KSVFFNSGAEAVENAVKIARSY 117 (420)
T ss_pred CCHHHHHHHHHHHHhccCcccc---c-cCC----hHHHHHHHHHHHhCCCCCCC----EEEEeCCcHHHHHHHHHHHHHh
Confidence 3788999988877652111110 0 111 1222355667776632 122 2444 55666777655533 2
Q ss_pred CCCCeEEeccCCCCcccCccccc------cccccccceeeeEEEecccCCC--------CCCCCHHHHHHHhh----hcC
Q 023191 134 KPHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLNES--------TGYIDYDQLEKSAT----LFR 195 (286)
Q Consensus 134 ~~Gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~~~--------~~~~d~e~l~~~i~----~~~ 195 (286)
....+|+.....|.+...-...+ +..+..-.-.....+|++.... .+.-+++.+++.+. ..+
T Consensus 118 tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (420)
T TIGR00700 118 TGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANN 197 (420)
T ss_pred cCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCc
Confidence 34456887776665543111100 0101000000112233221000 00012556776653 235
Q ss_pred CcEEEEcC--CCCCCccC----HHHHHHHHHhcCCEEEEeccccccccccC-C---CCCCCCcceEEEeCCCCCCCC-CC
Q 023191 196 PKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAG-V---IPSPFEYADVVTTTTHKSLRG-PR 264 (286)
Q Consensus 196 tk~v~i~~--~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~---~~~~~~~~D~v~~s~~K~l~g-p~ 264 (286)
+.+|++.| .+.|...+ +++|.++|++||+++|.|+++. |....+ . .... ...|+++ +.|.+++ .+
T Consensus 198 iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-g~gr~g~~~a~~~~~-~~pDi~~--lsK~l~~G~p 273 (420)
T TIGR00700 198 VAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQT-GFARTGAMFACEHEG-PEPDLIT--TAKSLADGLP 273 (420)
T ss_pred EEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccchhHHHhhcC-CCCCEEE--eeccccCCcc
Confidence 67888863 33453333 8999999999999999999965 221111 1 1111 1267655 7998853 34
Q ss_pred ceEEEEecchhhhhc
Q 023191 265 GAMIFFRKGVKEINK 279 (286)
Q Consensus 265 gG~l~~~~~~~~~~~ 279 (286)
.|++++++++.+...
T Consensus 274 ig~v~~~~~i~~~~~ 288 (420)
T TIGR00700 274 LSGVTGRAEIMDAPA 288 (420)
T ss_pred eEEEEecHHHHhhcC
Confidence 499999988876654
No 358
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.25 E-value=4.8e-05 Score=70.91 Aligned_cols=205 Identities=7% Similarity=-0.031 Sum_probs=109.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC-CChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~-sG~~a~~~~l~a~~--- 133 (286)
-.|++.+++.+.+.+.. +.....+. .+...++.+++.+.++...+ .+.++ ||+.|+.++++...
T Consensus 71 ~~p~v~~Ai~~ql~~~~---~~~~~~~~-----~~~~~~lAe~L~~~~p~~~~----~v~f~~sGseAve~AlKlA~~~~ 138 (453)
T PRK06943 71 ANPRINAALKDQLDTLE---HAMLAGCT-----HEPAIELAERLAALTGGTLG----HAFFASDGASAVEIALKMSFHAW 138 (453)
T ss_pred CCHHHHHHHHHHHHhcC---CccccccC-----CHHHHHHHHHHHHhCCCCCC----EEEEeCCCHHHHHHHHHHHHHHH
Confidence 47889999888776521 10000011 12233366777777654322 36665 56657776665431
Q ss_pred -----CCCCeEEeccCCCCcccCccccc-----cccc--cccceeeeEEEecccCCC-CC--------CCCHHHHHHHhh
Q 023191 134 -----KPHDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNES-TG--------YIDYDQLEKSAT 192 (286)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~~-~~--------~~d~e~l~~~i~ 192 (286)
....+|+.....|.+...-...+ ++.. ..+.+ +..++.+.... .. .-+++++++.+.
T Consensus 139 ~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~ 216 (453)
T PRK06943 139 RNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRH--AHVVASPDARGARPGETAADVAARALADVRRLFA 216 (453)
T ss_pred HHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCC--CEEECCCCccccccCCCHHHHHHHHHHHHHHHHH
Confidence 12467888887776643100000 0000 00011 11232221100 00 113577777775
Q ss_pred h--cCCcEEEEcC--CC-CCC----ccCHHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCCC
Q 023191 193 L--FRPKLIVAGA--SA-YAR----LYDYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSL 260 (286)
Q Consensus 193 ~--~~tk~v~i~~--~n-~g~----~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l 260 (286)
. .++.+|++.| .. .|. ..-++++.++|++||+++|.|+.+. +|-..... ....+ ..|++++ .|.+
T Consensus 217 ~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~--gKgl 293 (453)
T PRK06943 217 ERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCL--SKGI 293 (453)
T ss_pred hCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEee--ehhh
Confidence 3 2577888876 23 332 2238899999999999999999974 33221100 11111 2788876 7888
Q ss_pred CCCC--ceEEEEecchhhhhc
Q 023191 261 RGPR--GAMIFFRKGVKEINK 279 (286)
Q Consensus 261 ~gp~--gG~l~~~~~~~~~~~ 279 (286)
+|.. -|.+++++++.+...
T Consensus 294 ~gG~~Pi~av~~~~ei~~~~~ 314 (453)
T PRK06943 294 SGGYLPLSLVLSRDAIFAAFY 314 (453)
T ss_pred ccCcccceEEEEcHHHHHhhc
Confidence 7652 488888888776554
No 359
>PRK06149 hypothetical protein; Provisional
Probab=98.25 E-value=6.9e-05 Score=76.18 Aligned_cols=206 Identities=9% Similarity=-0.010 Sum_probs=106.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh--cCC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL--LKP 135 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~--~~~ 135 (286)
-.|+|.+++.+.+.... .. .+ + .. +...++.+++.+.+.-..+. -.++.||+.|+.++++.. ...
T Consensus 600 ~hp~v~~Ai~~q~~~l~---~~-~~-~-~~----~~~~elae~L~~~~p~~~~~---v~f~~SGsEA~e~AlklAr~~tg 666 (972)
T PRK06149 600 GHPRLAAAAARQWSLLN---TN-SR-F-HY----AAVAEFSERLAALAPDGLDT---VFLVNSGSEANDLAIRLAWAASG 666 (972)
T ss_pred CCHHHHHHHHHHHHhcc---cc-cc-c-cC----HHHHHHHHHHHHhCCCCcCE---EEEeCCchHHHHHHHHHHHHhcC
Confidence 37899999987765421 11 11 1 11 22333557777776322222 244566766887766622 233
Q ss_pred CCeEEeccCCCCcccCccc----ccc-cccc--ccceeeeEEEecccC-CCCCC-CC-----HHHHHHHhh-----hcCC
Q 023191 136 HDRIMALDLPHGGHLSHGY----QTD-TKKI--SAVSIFFETMPYRLN-ESTGY-ID-----YDQLEKSAT-----LFRP 196 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~----~~~-~~~~--~~~g~~~~~v~~~~~-~~~~~-~d-----~e~l~~~i~-----~~~t 196 (286)
...|+..+..|.+...-.. ... .... ...+ .+..++.+.. ...+. .| .+++++.+. ..++
T Consensus 667 r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~-~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 745 (972)
T PRK06149 667 RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPD-WVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGL 745 (972)
T ss_pred CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCC-CeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCce
Confidence 4567777766654321000 000 0000 0000 0122221100 00011 11 234444332 1246
Q ss_pred cEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEeccc-cccccccCC---CCCCCCcceEEEeCCCCCCCCCCc-
Q 023191 197 KLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAH-ISGLVAAGV---IPSPFEYADVVTTTTHKSLRGPRG- 265 (286)
Q Consensus 197 k~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~-~~g~~~~~~---~~~~~~~~D~v~~s~~K~l~gp~g- 265 (286)
.+|++. .++.|...+ +++|.++|++||+++|+|++| ++|-....+ ...++ ..|++ ++.|.++|...
T Consensus 746 AavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDiv--t~gK~lg~G~Pl 822 (972)
T PRK06149 746 AGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDII--TMAKGMGNGHPL 822 (972)
T ss_pred EEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEE--EecccccCCeee
Confidence 677775 344555555 999999999999999999998 444432111 11111 27887 55899976544
Q ss_pred eEEEEecchhhhhcc
Q 023191 266 AMIFFRKGVKEINKQ 280 (286)
Q Consensus 266 G~l~~~~~~~~~~~~ 280 (286)
|++++++++.+....
T Consensus 823 ~av~~~~~i~~~~~~ 837 (972)
T PRK06149 823 GAVITRREIAEALEA 837 (972)
T ss_pred EEEEEcHHHHhhhcc
Confidence 889999888776653
No 360
>PRK05965 hypothetical protein; Provisional
Probab=98.24 E-value=6e-05 Score=70.40 Aligned_cols=205 Identities=13% Similarity=0.058 Sum_probs=107.4
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC-CChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~-sG~~a~~~~l~a~~--- 133 (286)
-.|++.+++.+.+.+.. +... .+. ...+.+..+.+++.+.+..+.+ .|.++ ||+.|+.++++..-
T Consensus 63 ~~p~i~~Ai~~q~~~~~---~~~~-~~~---~~~~~~~~lae~L~~~~p~~~~----~v~f~~sGSEAve~AlKlAr~~~ 131 (459)
T PRK05965 63 GQESIVEAAAEQMRELP---YATG-YFH---FGSEPAIRLAAKLAERAPGSLN----HVYFTLGGSDAVDSAVRFIRHYW 131 (459)
T ss_pred CCHHHHHHHHHHHHhcC---Cccc-ccc---cCCHHHHHHHHHHHhhCCCCcC----EEEEeCChhHHHHHHHHHHHHHH
Confidence 37899999988776521 1000 000 0112223356777776643322 37775 46667776655331
Q ss_pred ---C-C-CCeEEeccCCCCcccCc-----cccccccc--cccceeeeEEEecccCC-CCCCCC--------HHHHHHHhh
Q 023191 134 ---K-P-HDRIMALDLPHGGHLSH-----GYQTDTKK--ISAVSIFFETMPYRLNE-STGYID--------YDQLEKSAT 192 (286)
Q Consensus 134 ---~-~-Gd~Vl~~~~~~~~~~~~-----~~~~~~~~--~~~~g~~~~~v~~~~~~-~~~~~d--------~e~l~~~i~ 192 (286)
. + ..+|+.....|.+...- ....++.. ....+ ...++.+... ..+.-| ++++++.+.
T Consensus 132 ~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 209 (459)
T PRK05965 132 NATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPW--QHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVA 209 (459)
T ss_pred HhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCC--CEEcCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 1 2 35788888777665310 00001110 00111 1222222110 001123 356777775
Q ss_pred h---cCCcEEEEcCCC--CCCc----cCHHHHHHHHHhcCCEEEEecccc-ccccccC--CCCCCCCcceEEEeCCCCCC
Q 023191 193 L---FRPKLIVAGASA--YARL----YDYERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSL 260 (286)
Q Consensus 193 ~---~~tk~v~i~~~n--~g~~----~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v~~s~~K~l 260 (286)
. .++.+|++.|-. .|.. .-++++.++|++||+++|.|+.+. +|-.... .....+ ..|++++ .|.+
T Consensus 210 ~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl 286 (459)
T PRK05965 210 ELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTV--AKGL 286 (459)
T ss_pred hcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEe--chhh
Confidence 3 256788886332 3322 238899999999999999999975 2222111 011111 2788876 7888
Q ss_pred CCCC--ceEEEEecchhhhh
Q 023191 261 RGPR--GAMIFFRKGVKEIN 278 (286)
Q Consensus 261 ~gp~--gG~l~~~~~~~~~~ 278 (286)
+|.. -|.+++++++.+..
T Consensus 287 ~gG~~Pi~av~~~~~i~~~~ 306 (459)
T PRK05965 287 TSGYVPMGAVLMSDHVYQGI 306 (459)
T ss_pred ccCCcceeEEEEcHHHHHHH
Confidence 7663 38888888876544
No 361
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.24 E-value=6.7e-05 Score=70.05 Aligned_cols=202 Identities=13% Similarity=0.106 Sum_probs=105.1
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~--~~ 134 (286)
-.|.+.+++.+.+.. .. +... .+. .+...++.+++.++++...+ .+.++++.+ ++.+++... ..
T Consensus 88 ~~p~v~~Ai~~ql~~-~~--~~~~-~~~-----~~~~~~lae~L~~~~p~~~~----~v~f~~sGseAve~AlklAr~~t 154 (459)
T PRK06082 88 GHPHVIEKVKEQMAK-LP--FSPR-RFT-----NETAIECAEKLTEIAGGELN----RVLFAPGGTSAIGMALKLARHIT 154 (459)
T ss_pred CCHHHHHHHHHHHHh-CC--CccC-ccC-----CHHHHHHHHHHHHhCCCCCC----EEEECCCcHHHHHHHHHHHHHhc
Confidence 478899999887764 21 1111 111 13333456778777753222 366655555 777555433 23
Q ss_pred CCCeEEeccCCCCcccCcccc-----ccccc--cccceeeeEEEecccCC-CCC-CC------CHHHHHHHhhh-cCCcE
Q 023191 135 PHDRIMALDLPHGGHLSHGYQ-----TDTKK--ISAVSIFFETMPYRLNE-STG-YI------DYDQLEKSATL-FRPKL 198 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~-----~~~~~--~~~~g~~~~~v~~~~~~-~~~-~~------d~e~l~~~i~~-~~tk~ 198 (286)
...+|+.....|.+...-... .++.. ....+ +..+|.+... ..+ .. +++++++.+.. .++.+
T Consensus 155 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAa 232 (459)
T PRK06082 155 GNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAG--VERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGA 232 (459)
T ss_pred CCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCC--CEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEE
Confidence 447788877666554210100 00000 00011 1222211100 001 01 13557777753 24667
Q ss_pred EEEcCCC-CC-CccC---HHHHHHHHHhcCCEEEEeccccc-cccccCC--CCCCCCcceEEEeCCCCCCCCCC--ceEE
Q 023191 199 IVAGASA-YA-RLYD---YERIRKVCNKQKAIMLADMAHIS-GLVAAGV--IPSPFEYADVVTTTTHKSLRGPR--GAMI 268 (286)
Q Consensus 199 v~i~~~n-~g-~~~~---l~~I~~ia~~~~~~vivD~a~~~-g~~~~~~--~~~~~~~~D~v~~s~~K~l~gp~--gG~l 268 (286)
|++.|-. .| ...| +++|.++|++||+++|.|++|.. |-....+ ...++ ..|+++ +.|.++|.. .|.+
T Consensus 233 vIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~gG~~P~~av 309 (459)
T PRK06082 233 FIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLGGGLVPIAAM 309 (459)
T ss_pred EEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--ecccccCCCCcceEE
Confidence 7776322 33 2333 89999999999999999999762 2111110 11111 278887 689997652 3777
Q ss_pred EEecchhhh
Q 023191 269 FFRKGVKEI 277 (286)
Q Consensus 269 ~~~~~~~~~ 277 (286)
++++++.+.
T Consensus 310 ~~~~~i~~~ 318 (459)
T PRK06082 310 ITKDKYNTA 318 (459)
T ss_pred EEcHHHHhh
Confidence 777776543
No 362
>PRK07678 aminotransferase; Validated
Probab=98.20 E-value=5.5e-05 Score=70.52 Aligned_cols=200 Identities=15% Similarity=0.117 Sum_probs=106.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeC-CChHHHHHHHHHh---c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSL-SGSPSNFQVYTAL---L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~-sG~~a~~~~l~a~---~ 133 (286)
-.|++.+++.+.+.... +... .+. + +.+.++.+.+.+.++... .|.++ ||+.|+..+++.. .
T Consensus 64 ~~p~v~~ai~~q~~~~~---~~~~-~~~-~----~~~~~lae~l~~~~~~~~-----~v~f~~sGseA~e~AlklAr~~t 129 (451)
T PRK07678 64 GRKELAEAAYEQLKTLS---YFPL-TQS-H----EPAIKLAEKLNEWLGGEY-----VIFFSNSGSEANETAFKIARQYH 129 (451)
T ss_pred CCHHHHHHHHHHHHhcC---cccc-ccC-C----HHHHHHHHHHHHhCCCCC-----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 37888888888776421 1110 011 1 222336677777765431 36664 5666777655533 1
Q ss_pred ----CCC-CeEEeccCCCCcccCccccc-----cccc--cccceeeeEEEecccCCCCCC---------CC---HHHHHH
Q 023191 134 ----KPH-DRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNESTGY---------ID---YDQLEK 189 (286)
Q Consensus 134 ----~~G-d~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~~~~~---------~d---~e~l~~ 189 (286)
++| .+|+.....|.+...-.... ++.. ....+ +..++.+ +.+. .| ++.+++
T Consensus 130 ~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 204 (451)
T PRK07678 130 AQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPG--FLHVPPP---DCYRMPGIESEDIYDLECVKEIDR 204 (451)
T ss_pred HhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCC--CEEeCCC---ccccccccCChHHHHHHHHHHHHH
Confidence 123 57888776666543111100 0000 00111 1222211 1111 11 233566
Q ss_pred Hhh---hcCCcEEEEcCC--CCCCcc----CHHHHHHHHHhcCCEEEEecccc-cccccc--CCCCCCCCcceEEEeCCC
Q 023191 190 SAT---LFRPKLIVAGAS--AYARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTH 257 (286)
Q Consensus 190 ~i~---~~~tk~v~i~~~--n~g~~~----~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~v~~s~~ 257 (286)
.+. ..++.+|++.|- +.|... -++++.++|++||+++|.|+++. +|-... .....++ ..|++++ .
T Consensus 205 ~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--g 281 (451)
T PRK07678 205 VMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--A 281 (451)
T ss_pred HHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--e
Confidence 664 235788888633 234332 28999999999999999999974 443221 1111111 2788865 8
Q ss_pred CCCCCC--CceEEEEecchhhhhc
Q 023191 258 KSLRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 258 K~l~gp--~gG~l~~~~~~~~~~~ 279 (286)
|.++|. +-|++++++++.+...
T Consensus 282 K~lggG~~Pi~av~~~~~i~~~~~ 305 (451)
T PRK07678 282 KGITSAYLPLSATAVKKEIYEAFK 305 (451)
T ss_pred cccccCCcceeEEEEcHHHHHHHh
Confidence 988765 2388888888776554
No 363
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.20 E-value=4.3e-05 Score=70.72 Aligned_cols=205 Identities=10% Similarity=0.021 Sum_probs=106.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-.|++.+++.+.+.+.. +.....+. .+.+..+.+.+.+.+....+ .|.+ .||+.|+.+++....
T Consensus 61 ~~p~v~~ai~~q~~~~~---~~~~~~~~-----~~~~~~lae~L~~~~p~~~~----~v~f~~sGseAve~AlklAr~~~ 128 (429)
T PRK06173 61 NHPRLNAAATNQLAKMS---HIMFGGFT-----HEPAVELAQKLLEILPPSLN----KIFFADSGSVAVEVAMKMALQYQ 128 (429)
T ss_pred CCHHHHHHHHHHHHhcC---CccccccC-----CHHHHHHHHHHHhhCCCCcC----EEEEeCCchHHHHHHHHHHHHHH
Confidence 36888888888775421 10000011 12223355777776642222 3665 555557776555332
Q ss_pred ----CC-CCeEEeccCCCCcccCccccc------ccccc--ccceeeeEEEecccCCC--CC-CCCHHHHHHHhhh--cC
Q 023191 134 ----KP-HDRIMALDLPHGGHLSHGYQT------DTKKI--SAVSIFFETMPYRLNES--TG-YIDYDQLEKSATL--FR 195 (286)
Q Consensus 134 ----~~-Gd~Vl~~~~~~~~~~~~~~~~------~~~~~--~~~g~~~~~v~~~~~~~--~~-~~d~e~l~~~i~~--~~ 195 (286)
++ ..+|+.....|.+...-...+ ++... ...+ ...+|.+.... .+ .-+++.+++.+.. .+
T Consensus 129 ~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~ 206 (429)
T PRK06173 129 QAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPV--QYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDE 206 (429)
T ss_pred HHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCC--CeEeCCCCcccchhHHHHHHHHHHHHHHhCCCc
Confidence 13 357888877666542110000 00000 0001 11222221100 00 1146667777753 25
Q ss_pred CcEEEEcC--CCCC-C----ccCHHHHHHHHHhcCCEEEEeccccccccccC-CC-CCCCC-cceEEEeCCCCCCCCC--
Q 023191 196 PKLIVAGA--SAYA-R----LYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VI-PSPFE-YADVVTTTTHKSLRGP-- 263 (286)
Q Consensus 196 tk~v~i~~--~n~g-~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~-~~~~~-~~D~v~~s~~K~l~gp-- 263 (286)
+.+|++.| ...| . ..-+++|.++|++||+++|+|++| .|.-..+ .. ...+. ..|+++ +.|.++|.
T Consensus 207 iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~~ 283 (429)
T PRK06173 207 IAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALTGGYL 283 (429)
T ss_pred EEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhhCCcc
Confidence 77888876 3333 2 223889999999999999999998 5531111 10 00111 268776 68988654
Q ss_pred CceEEEEecchhhhhc
Q 023191 264 RGAMIFFRKGVKEINK 279 (286)
Q Consensus 264 ~gG~l~~~~~~~~~~~ 279 (286)
..+.+++++++.+...
T Consensus 284 p~~a~~~~~~i~~~~~ 299 (429)
T PRK06173 284 TLSATITTEAIAQTIC 299 (429)
T ss_pred ccceEEecHHHHHHHh
Confidence 3477888888776653
No 364
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.17 E-value=0.00011 Score=68.58 Aligned_cols=208 Identities=13% Similarity=0.116 Sum_probs=104.2
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~--~~ 134 (286)
-.|.+.+++.+.+.+... .... ....+.+.++.+++.+++.....+ .|.+++ |+.|+.++++.. ..
T Consensus 71 ~~p~v~~ai~~q~~~~~~---~~~~-----~~~~~~~~~la~~L~~~~p~~~~~---~v~f~~sGseA~e~AlklAr~~t 139 (451)
T PRK06918 71 SHPKVKEALHKQVDQYIH---TGFN-----VMMYEPYIELAEKLAALAPGSFDK---KVLFLNSGAEAVENAVKIARKYT 139 (451)
T ss_pred CCHHHHHHHHHHHHhccC---cccc-----ccccHHHHHHHHHHHHhCCCCCCC---EEEEcCCcHHHHHHHHHHHHHHh
Confidence 378899999887765211 1100 011133334667777776532211 366655 554777665533 23
Q ss_pred CCCeEEeccCCCCcccCccccc------cccccccceeeeEEEecccCC--CCCCCC-------HHHHHHHh----hhcC
Q 023191 135 PHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLNE--STGYID-------YDQLEKSA----TLFR 195 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~~--~~~~~d-------~e~l~~~i----~~~~ 195 (286)
...+|+.....|.+...-.... ++....-....+..+|++... ..+..+ ++.+++.+ ...+
T Consensus 140 gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (451)
T PRK06918 140 KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPET 219 (451)
T ss_pred CCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCc
Confidence 4467888776666553211110 000000000001222322100 001000 22344333 1235
Q ss_pred CcEEEEcCCC-C-CCc----cCHHHHHHHHHhcCCEEEEeccccccccccC-CCCC-CCC-cceEEEeCCCCCCCC-CCc
Q 023191 196 PKLIVAGASA-Y-ARL----YDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPS-PFE-YADVVTTTTHKSLRG-PRG 265 (286)
Q Consensus 196 tk~v~i~~~n-~-g~~----~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~-~~~-~~D~v~~s~~K~l~g-p~g 265 (286)
+.+|++.|-. . |.. ..+++|.++|++||+++|.|+.+. |....+ .... .+. ..|++ ++.|.+++ .+-
T Consensus 220 iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~t-g~gr~g~~~a~~~~~v~pDi~--t~sK~l~~G~pi 296 (451)
T PRK06918 220 IAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQT-GFARTGKYFAIEHFDVVPDLI--TVSKSLGAGVPI 296 (451)
T ss_pred eEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CcCccCceehhHhcCCCCCEE--eeehhhcCCCcc
Confidence 6778776433 2 322 238899999999999999999964 221111 1110 011 25644 68998854 333
Q ss_pred eEEEEecchhhhhc
Q 023191 266 AMIFFRKGVKEINK 279 (286)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (286)
|++++++++.+...
T Consensus 297 g~v~~~~~i~~~~~ 310 (451)
T PRK06918 297 SGVIGRKEIMDESA 310 (451)
T ss_pred EEEEEcHHHHhccC
Confidence 99999988776554
No 365
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.17 E-value=4.3e-05 Score=70.84 Aligned_cols=91 Identities=14% Similarity=0.127 Sum_probs=61.7
Q ss_pred CHHHHHHHhhhc--CCcEEEEcCC--CCCCccCHHHHHHHHHhcCCEEEEeccccccccccC--CCC-CCCCcceEEEeC
Q 023191 183 DYDQLEKSATLF--RPKLIVAGAS--AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG--VIP-SPFEYADVVTTT 255 (286)
Q Consensus 183 d~e~l~~~i~~~--~tk~v~i~~~--n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~--~~~-~~~~~~D~v~~s 255 (286)
|++++++.+..+ ++.+|++.+. +.+....+++|.++|++||+++|+|++| .|..... ... ..+ ..|+ .+
T Consensus 173 d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv-~PDi--~t 248 (431)
T PRK06209 173 DIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGI-VPDL--SC 248 (431)
T ss_pred CHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCC-Ccce--ee
Confidence 789999988642 4566776532 2344556999999999999999999998 5542211 110 111 2576 44
Q ss_pred CCCCCCCC-CceEEEEecchhhh
Q 023191 256 THKSLRGP-RGAMIFFRKGVKEI 277 (286)
Q Consensus 256 ~~K~l~gp-~gG~l~~~~~~~~~ 277 (286)
+.|.++|. .+|++++++++.+.
T Consensus 249 ~gK~lggG~p~~av~~~~~i~~~ 271 (431)
T PRK06209 249 FGKALGNGFAVSALAGKREYMEL 271 (431)
T ss_pred ehhhhcCCcccEEEEEHHHHHhh
Confidence 68999764 35888888888775
No 366
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.17 E-value=2.2e-05 Score=72.50 Aligned_cols=206 Identities=15% Similarity=0.096 Sum_probs=105.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-.|++.+++.+.+.+........ + .+ +....+.+++.+......+ .+.+ +||+.|+..++....
T Consensus 57 ~~p~i~~ai~~q~~~~~~~~~~~---~-~~----~~~~~lae~L~~~~p~~~~----~v~f~~SGseA~e~AlklAr~~~ 124 (422)
T PRK05630 57 GHPRLKAAAHKQIDTMSHVMFGG---L-TH----EPAIKLTRKLLNLTDNGLD----HVFYSDSGSVSVEVAIKMALQYS 124 (422)
T ss_pred CCHHHHHHHHHHHHhCCCcccCC---c-CC----HHHHHHHHHHHhhCCCCcC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 37888888888776521100000 0 11 2223355777776543222 2555 556667776555331
Q ss_pred ----CC-CCeEEeccCCCCcccCccccccc-cc-c-c-cce--eeeEEEecccCCCCCCCC----HHHHHHHhhhcCCcE
Q 023191 134 ----KP-HDRIMALDLPHGGHLSHGYQTDT-KK-I-S-AVS--IFFETMPYRLNESTGYID----YDQLEKSATLFRPKL 198 (286)
Q Consensus 134 ----~~-Gd~Vl~~~~~~~~~~~~~~~~~~-~~-~-~-~~g--~~~~~v~~~~~~~~~~~d----~e~l~~~i~~~~tk~ 198 (286)
.+ ..+|+.....|.+...-...... .. . . +.. .....+|.+.......-| .+.+++.+.+ ++.+
T Consensus 125 ~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~iAA 203 (422)
T PRK05630 125 KGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE-TVAA 203 (422)
T ss_pred HhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh-ceEE
Confidence 12 35788887766654211110000 00 0 0 000 001122222100000001 2445555554 7888
Q ss_pred EEEcCC--C-CC----CccCHHHHHHHHHhcCCEEEEeccccccccccC-CCCCC-CC-cceEEEeCCCCCCCC--CCce
Q 023191 199 IVAGAS--A-YA----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIPSP-FE-YADVVTTTTHKSLRG--PRGA 266 (286)
Q Consensus 199 v~i~~~--n-~g----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~~~-~~-~~D~v~~s~~K~l~g--p~gG 266 (286)
|++.|- . .| ....+++|.++|++||+++|+|++|. |.-..+ ..... .. ..|++ ++.|.++| +..|
T Consensus 204 vi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDi~--t~gK~l~gG~~p~~ 280 (422)
T PRK05630 204 IIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIAT-GFGRTGELFATLAAGVTPDIM--CVGKALTGGFMSFA 280 (422)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccee-CCCcCchhhHHHhcCCCCCee--eeechhhcCccccc
Confidence 888762 2 23 23358899999999999999999984 331111 10000 01 26777 56899955 4668
Q ss_pred EEEEecchhhhhc
Q 023191 267 MIFFRKGVKEINK 279 (286)
Q Consensus 267 ~l~~~~~~~~~~~ 279 (286)
++++++++.+...
T Consensus 281 av~~~~~i~~~~~ 293 (422)
T PRK05630 281 ATLCTDKVAQLIS 293 (422)
T ss_pred eeeccHHHHHHHh
Confidence 8999988877654
No 367
>PRK07480 putative aminotransferase; Validated
Probab=98.15 E-value=0.0001 Score=68.85 Aligned_cols=91 Identities=16% Similarity=0.130 Sum_probs=57.2
Q ss_pred HHHHHHhhh---cCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccC--CCCCCCCcceEE
Q 023191 185 DQLEKSATL---FRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVV 252 (286)
Q Consensus 185 e~l~~~i~~---~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~v 252 (286)
+.+++.+.. .++.+|++.|-. .|...+ +++|.++|++||+++|+|+++. +|-.... .....+ ..|++
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv 284 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLM 284 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCee
Confidence 566655532 256788886332 343333 8999999999999999999984 3322211 111111 26776
Q ss_pred EeCCCCCCCCCC--ceEEEEecchhhhh
Q 023191 253 TTTTHKSLRGPR--GAMIFFRKGVKEIN 278 (286)
Q Consensus 253 ~~s~~K~l~gp~--gG~l~~~~~~~~~~ 278 (286)
++ .|.++|.. -|.+++++++.+..
T Consensus 285 ~~--gK~l~gG~~Pi~av~~~~~i~~~~ 310 (456)
T PRK07480 285 TI--AKGLTSGYIPMGAVGVGDRVAEVL 310 (456)
T ss_pred ee--ehhhccCCccceEEEEcHHHHHHH
Confidence 54 89887642 47777788877665
No 368
>PRK06148 hypothetical protein; Provisional
Probab=98.12 E-value=0.00016 Score=73.73 Aligned_cols=206 Identities=13% Similarity=0.081 Sum_probs=107.4
Q ss_pred CHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHh--cCC
Q 023191 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LKP 135 (286)
Q Consensus 59 ~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~--~~~ 135 (286)
.|.|.+++.+.+..... . . .+. .+.+.++.+++.+.+..+.+ .+.+ .||+.|+.++++.. ...
T Consensus 640 hp~v~~Ai~~q~~~l~~--~--~-~~~-----~~~~~~lAe~L~~~~p~~~~----~v~f~nSGsEA~e~AlklAr~~tG 705 (1013)
T PRK06148 640 HPRVVAAAARQAARLNT--N--T-RYL-----HDAIVAYAERLTATLPDGLT----VAFFVNSGSEANSLALRLARAHTG 705 (1013)
T ss_pred CHHHHHHHHHHHhhcCC--c--C-CcC-----CHHHHHHHHHHHHhCCCCcC----EEEEeCCcHHHHHHHHHHHHHhcC
Confidence 68899998887754210 0 0 111 12333356777776643222 2544 55666777655543 234
Q ss_pred CCeEEeccCCCCcccCccccc----cccccc-cceeeeEEEecccC-CCCCC-CC-------HHHHHHHhh---h--cCC
Q 023191 136 HDRIMALDLPHGGHLSHGYQT----DTKKIS-AVSIFFETMPYRLN-ESTGY-ID-------YDQLEKSAT---L--FRP 196 (286)
Q Consensus 136 Gd~Vl~~~~~~~~~~~~~~~~----~~~~~~-~~g~~~~~v~~~~~-~~~~~-~d-------~e~l~~~i~---~--~~t 196 (286)
..+|+.....|.+...-...+ +..... ..-..+..++.+.. ...+. .| .+.+++.+. . .++
T Consensus 706 r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~i 785 (1013)
T PRK06148 706 QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGP 785 (1013)
T ss_pred CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCce
Confidence 567888877666553211000 000000 00000111111100 00011 11 134555553 1 256
Q ss_pred cEEEEc--CCCCCCccC----HHHHHHHHHhcCCEEEEecccc-ccccccCC---CCCCCCcceEEEeCCCCCCCCCCc-
Q 023191 197 KLIVAG--ASAYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV---IPSPFEYADVVTTTTHKSLRGPRG- 265 (286)
Q Consensus 197 k~v~i~--~~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~---~~~~~~~~D~v~~s~~K~l~gp~g- 265 (286)
.+|++. ..+-|.+.+ ++++.++|++||+++|.|++|. +|-..... ....+ -.|++++ .|.++|...
T Consensus 786 AAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Pl 862 (1013)
T PRK06148 786 AFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPM 862 (1013)
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcce
Confidence 778876 333343333 8999999999999999999984 44332111 11111 2788765 899876544
Q ss_pred eEEEEecchhhhhccC
Q 023191 266 AMIFFRKGVKEINKQG 281 (286)
Q Consensus 266 G~l~~~~~~~~~~~~~ 281 (286)
|++++++++.+....+
T Consensus 863 gav~~~~ei~~~~~~g 878 (1013)
T PRK06148 863 GAVVTTREIADSFDNG 878 (1013)
T ss_pred EEEEEcHHHHhhccCC
Confidence 8888998887765543
No 369
>PRK07481 hypothetical protein; Provisional
Probab=98.10 E-value=0.00024 Score=66.24 Aligned_cols=207 Identities=13% Similarity=0.094 Sum_probs=104.5
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHh---c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL---L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~---~ 133 (286)
-.|++.+|+.+.+.... +... +.+.. .+.+.++.+++.++++-..- ..+.+++ |+.|+.++++.. .
T Consensus 59 ~~p~v~~Ai~~ql~~~~---~~~~--~~~~~--~~~~~~lae~L~~~~~~~~~---~~v~f~~sGsEAve~AlklAr~~~ 128 (449)
T PRK07481 59 NREEVKEAIVRQLDELE---YYST--FDGTT--HPRAIELSYELIDMFAPEGM---RRVFFSSGGSDSVETALKLARQYW 128 (449)
T ss_pred CCHHHHHHHHHHHHhcc---ceec--ccccC--CHHHHHHHHHHHHhcCCCCC---CEEEEcCchHHHHHHHHHHHHHHH
Confidence 36888888888776421 1000 00001 12233366777777642111 1366655 555777665533 1
Q ss_pred ----CC-CCeEEeccCCCCcccCccccc-----cccc--cccceeeeEEEecccCC-CCCC-CCHHH--------HHHHh
Q 023191 134 ----KP-HDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNE-STGY-IDYDQ--------LEKSA 191 (286)
Q Consensus 134 ----~~-Gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~-~~~~-~d~e~--------l~~~i 191 (286)
.+ ..+|+.....|.+...-.... ++.. ....| +..++.+... ..+. -|+++ +++.+
T Consensus 129 ~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i 206 (449)
T PRK07481 129 KVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPG--CFHVETPWLYRNPFTEQDPEELARICARLLEREI 206 (449)
T ss_pred HhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCC--CEEeCCCcccccccCCCCHHHHHHHHHHHHHHHH
Confidence 12 357888887776643111100 0000 00111 1112211000 0011 13333 34444
Q ss_pred h---hcCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEecccc-cccccc--CCCCCCCCcceEEEeCCCCC
Q 023191 192 T---LFRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKS 259 (286)
Q Consensus 192 ~---~~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~v~~s~~K~ 259 (286)
. ..++.+|++.|-. .|...+ ++++.++|++||+++|.|+++. +|-... ......+ ..|++++ .|.
T Consensus 207 ~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKg 283 (449)
T PRK07481 207 AFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKG 283 (449)
T ss_pred HhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eec
Confidence 3 1257788886332 343322 8999999999999999999975 222211 0111111 2788776 798
Q ss_pred CCCC--CceEEEEecchhhhhc
Q 023191 260 LRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 260 l~gp--~gG~l~~~~~~~~~~~ 279 (286)
++|. +-|++++++++.+..+
T Consensus 284 l~gG~~Pi~av~~~~~i~~~~~ 305 (449)
T PRK07481 284 ITSGYVPLGATMVNARIADAFE 305 (449)
T ss_pred ccCCCcCceEEEEcHHHHHHHh
Confidence 8764 2477888888776654
No 370
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.09 E-value=0.00017 Score=67.17 Aligned_cols=200 Identities=11% Similarity=0.051 Sum_probs=101.3
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHh--cC
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LK 134 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~--~~ 134 (286)
-+|++.+++.+.+..... ....++ ..+.+.++.+++.+++......+ ..+++ +||+.|+..+++.. ..
T Consensus 56 ~~p~i~~ai~~q~~~~~~---~~~~~~-----~~~~~~~lae~L~~~~p~~~~~~-~~~f~~~sGsEA~e~AlklAr~~t 126 (442)
T TIGR00709 56 NHPNMKQKILDYLQSGLP---LHTLDL-----TTPLKDAFIEALLNIIPKRKMDY-KLQFPGPSGADAVEAAIKLAKTYT 126 (442)
T ss_pred CCHHHHHHHHHHHHhccC---cccccc-----CcHHHHHHHHHHHHhCCCcCCCc-cEEEeCCCHHHHHHHHHHHHHHhc
Confidence 478899999887764210 000001 11333346677877764321000 12444 57777777655533 23
Q ss_pred CCCeEEeccCCCCcccCccccc-----cccc--cccceeeeEEEecccCCCCCCC--------CH----HHHHHHhhh--
Q 023191 135 PHDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNESTGYI--------DY----DQLEKSATL-- 193 (286)
Q Consensus 135 ~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~~~~~~--------d~----e~l~~~i~~-- 193 (286)
...+|+.....|.+...-...+ ++.+ ....+ +..++++ +.... +. +.+++.+..
T Consensus 127 gr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (442)
T TIGR00709 127 GRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPG--VQFMPYP---HEYRCPFGIGGEAGSNASIEYFENFIEDVE 201 (442)
T ss_pred CCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCC--cEEeCCC---ccccccccCCchhHHHHHHHHHHHHHHhhc
Confidence 4567888876666553211111 0000 00111 2222222 11111 11 223344421
Q ss_pred ---cCCcEEEEc-CCCC-CCc----cCHHHHHHHHHhcCCEEEEecccc-ccccccCCCCC-CCC-cceEEEeCCCCCCC
Q 023191 194 ---FRPKLIVAG-ASAY-ARL----YDYERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPS-PFE-YADVVTTTTHKSLR 261 (286)
Q Consensus 194 ---~~tk~v~i~-~~n~-g~~----~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~-~~~-~~D~v~~s~~K~l~ 261 (286)
.++.+|++. ..+. |.. .-+++|.++|++||+++|.|+++. +|-.. ..... .+. ..|+++ +.|.++
T Consensus 202 ~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~--~gK~l~ 278 (442)
T TIGR00709 202 SGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG-TMFAFEHAGIEPDFVV--MSKAVG 278 (442)
T ss_pred cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC-chhHHHHcCCCCcEEE--Eccccc
Confidence 256777776 3233 322 238899999999999999999975 33221 11110 011 268888 689886
Q ss_pred CCC-ceEEEEecch
Q 023191 262 GPR-GAMIFFRKGV 274 (286)
Q Consensus 262 gp~-gG~l~~~~~~ 274 (286)
+.- -|++++++++
T Consensus 279 ~G~Pigav~~~~~~ 292 (442)
T TIGR00709 279 GGLPLAVLLIAPEF 292 (442)
T ss_pred CCcccEEEEEchHH
Confidence 533 3888888764
No 371
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.08 E-value=0.00017 Score=67.50 Aligned_cols=204 Identities=10% Similarity=0.006 Sum_probs=106.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~~--- 133 (286)
-.|++.+++.+.+.... +.....+. .+.+.++.+++.+++....+ .|.+++ |+.|+..+++...
T Consensus 64 ~~p~v~~Ai~~ql~~l~---~~~~~~~~-----~~~~~~lae~L~~~~p~~~~----~v~f~~sGsEAve~AlKlAr~~~ 131 (466)
T PRK07030 64 ANPRINQRIKDQVDQLE---HVILAGFS-----HEPVIELSERLVKITPPGLS----RCFYADNGSSAIEVALKMSFHYW 131 (466)
T ss_pred CCHHHHHHHHHHHHhcC---CccccccC-----CHHHHHHHHHHHHhCCCCcC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 36888888888776421 00000011 12233356777776642222 366655 5557776665431
Q ss_pred -----CCCCeEEeccCCCCcccCcccc-----ccccc--cccceeeeEEEecccCC-CCC--------CCCHHHHHHHhh
Q 023191 134 -----KPHDRIMALDLPHGGHLSHGYQ-----TDTKK--ISAVSIFFETMPYRLNE-STG--------YIDYDQLEKSAT 192 (286)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~~~~-----~~~~~--~~~~g~~~~~v~~~~~~-~~~--------~~d~e~l~~~i~ 192 (286)
....+|+.....|.+...-... .++.. ....+ +..+|.+... ... .-+++++++.+.
T Consensus 132 ~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~ 209 (466)
T PRK07030 132 RNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLD--TIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLA 209 (466)
T ss_pred HHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCC--CEEcCCCCccccccCCCHHHHHHHHHHHHHHHHH
Confidence 1235788887666654211100 00000 00011 1222222100 000 113566777775
Q ss_pred h--cCCcEEEEcC-C-C-CCCc----cCHHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEEEeCCCCCC
Q 023191 193 L--FRPKLIVAGA-S-A-YARL----YDYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSL 260 (286)
Q Consensus 193 ~--~~tk~v~i~~-~-n-~g~~----~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v~~s~~K~l 260 (286)
. .++.+|++.| . . .|.. .-+++|.++|++||+++|.|+.+. +|-..... ...++ ..|++++ .|.+
T Consensus 210 ~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~--gKgl 286 (466)
T PRK07030 210 EHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCL--SKAL 286 (466)
T ss_pred hCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEee--ehhc
Confidence 3 2567888876 2 2 3322 238899999999999999999975 33222100 11111 2788876 7888
Q ss_pred CCCC--ceEEEEecchhhhh
Q 023191 261 RGPR--GAMIFFRKGVKEIN 278 (286)
Q Consensus 261 ~gp~--gG~l~~~~~~~~~~ 278 (286)
+|.. -|.+++++++.+..
T Consensus 287 ~gG~~Pi~av~~~~ei~~~~ 306 (466)
T PRK07030 287 TGGYLPLAAVLTTDTVYQAF 306 (466)
T ss_pred cCCcccceEEEecHHHHHHH
Confidence 7663 48888898876654
No 372
>PRK07036 hypothetical protein; Provisional
Probab=98.07 E-value=0.00032 Score=65.65 Aligned_cols=208 Identities=12% Similarity=0.101 Sum_probs=105.1
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCC-ChHHHHHHHHHh---c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS-GSPSNFQVYTAL---L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~s-G~~a~~~~l~a~---~ 133 (286)
-.|++.+++.+.+.... +... +.. ...+.+..+.+++.+....+.+ .|.+++ |+.|+..+++.. .
T Consensus 68 ~~p~v~~Ai~~q~~~~~---~~~~--~~~--~~~~~~~~lae~L~~~~p~~~~----~v~f~~sGseAve~AlklAr~~~ 136 (466)
T PRK07036 68 GREEMADAIADQARRLP---YYTP--FGD--MTNAPAAELAAKLAELAPGDLN----HVFLTTGGSTAVDSALRFVHYYF 136 (466)
T ss_pred CCHHHHHHHHHHHHhCc---cccc--ccc--cCCHHHHHHHHHHHHhCCCCcC----EEEEeCCchHHHHHHHHHHHHHH
Confidence 37888888887765411 1000 000 0112333466777776643222 366655 555777655533 1
Q ss_pred ---C-C-CCeEEeccCCCCcccCcccc-----ccccccccceeeeEEEecccC-CCCCCC--------CHHHHHHHhhh-
Q 023191 134 ---K-P-HDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRLN-ESTGYI--------DYDQLEKSATL- 193 (286)
Q Consensus 134 ---~-~-Gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~~-~~~~~~--------d~e~l~~~i~~- 193 (286)
. + ..+|+.....|.+...-... .++....-....+..++.+.. ...... .++.+++.+..
T Consensus 137 ~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 216 (466)
T PRK07036 137 NVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL 216 (466)
T ss_pred HhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHc
Confidence 1 2 36788877666654311000 000000000000112222110 000011 13445555532
Q ss_pred --cCCcEEEEcCC--CCCCccC----HHHHHHHHHhcCCEEEEecccc-cccccc--CCC-CCCCCcceEEEeCCCCCCC
Q 023191 194 --FRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVI-PSPFEYADVVTTTTHKSLR 261 (286)
Q Consensus 194 --~~tk~v~i~~~--n~g~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~-~~~~~~~D~v~~s~~K~l~ 261 (286)
.++.+|++.|- +.|...+ +++|.++|++||+++|.|+++. +|-... ... ...+ ..|++++ .|.++
T Consensus 217 ~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~ 293 (466)
T PRK07036 217 GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLT 293 (466)
T ss_pred CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEE--ccccc
Confidence 25678888633 2444443 8999999999999999999974 332210 111 1111 2687755 89887
Q ss_pred CC--CceEEEEecchhhhhc
Q 023191 262 GP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 262 gp--~gG~l~~~~~~~~~~~ 279 (286)
|. +-|.+++++++.+..+
T Consensus 294 gG~~Pi~av~~~~~i~~~~~ 313 (466)
T PRK07036 294 SGYQPLGAVIISERLLDVIS 313 (466)
T ss_pred cCccccEEEEEcHHHHHHHh
Confidence 75 2477778888776654
No 373
>PRK07483 hypothetical protein; Provisional
Probab=98.07 E-value=0.00017 Score=67.02 Aligned_cols=91 Identities=19% Similarity=0.220 Sum_probs=58.8
Q ss_pred HHHHHHhhh---cCCcEEEEcCCC--C-CCcc----CHHHHHHHHHhcCCEEEEecccc-ccccccCCC---CCCCCcce
Q 023191 185 DQLEKSATL---FRPKLIVAGASA--Y-ARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAAGVI---PSPFEYAD 250 (286)
Q Consensus 185 e~l~~~i~~---~~tk~v~i~~~n--~-g~~~----~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~---~~~~~~~D 250 (286)
+++++.+.. .++.+|++.|-. . |... -++.|.++|++||+++|.|+.+. +|-.. ... ...+ ..|
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG-~~~a~~~~gv-~PD 263 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG-TLFACEEDGV-APD 263 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc-HHHHHhhcCC-CCC
Confidence 566665542 256788886432 2 3222 38999999999999999999976 32221 111 1111 268
Q ss_pred EEEeCCCCCCCCCC--ceEEEEecchhhhhc
Q 023191 251 VVTTTTHKSLRGPR--GAMIFFRKGVKEINK 279 (286)
Q Consensus 251 ~v~~s~~K~l~gp~--gG~l~~~~~~~~~~~ 279 (286)
++++ .|.++|.. -|++++++++.+..+
T Consensus 264 iv~~--gK~l~gG~~Pi~av~~~~~i~~~~~ 292 (443)
T PRK07483 264 LVTI--AKGLGAGYQPIGAVLASDRIYDAIA 292 (443)
T ss_pred eeee--hhhhccCccccEEEEEcHHHHHHHh
Confidence 7776 79887663 488888888776654
No 374
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.06 E-value=5.3e-05 Score=70.78 Aligned_cols=204 Identities=15% Similarity=0.118 Sum_probs=107.0
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-+|++.+++.+.+.... .. ....+ .+ +.+.++.+++.+++....+ .+.+ .||+.|+.++++...
T Consensus 73 ~~p~v~~Ai~~ql~~l~-~~--~~~~~-~~----~~~~~lae~L~~~~p~~~~----~v~f~~SGseAve~AlklAr~~~ 140 (460)
T PRK06916 73 QVPELDEAIREQLNKIA-HS--TLLGL-AN----VPSILLAEKLIEVVPEGLK----KVFYSDSGATAVEIAIKMAFQYW 140 (460)
T ss_pred CCHHHHHHHHHHHHhCC-Cc--ccccc-CC----HHHHHHHHHHHHhCCCCCC----EEEEeCCcHHHHHHHHHHHHHHH
Confidence 47889999988776521 01 00001 11 2233466777777653222 3555 555557776655331
Q ss_pred ----CC-CCeEEeccCCCCcccCccccc-----ccccc--ccceeeeEEEecccC-CCCC--------CCCHHHHHHHhh
Q 023191 134 ----KP-HDRIMALDLPHGGHLSHGYQT-----DTKKI--SAVSIFFETMPYRLN-ESTG--------YIDYDQLEKSAT 192 (286)
Q Consensus 134 ----~~-Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~--~~~g~~~~~v~~~~~-~~~~--------~~d~e~l~~~i~ 192 (286)
.+ ..+|+.....|.+...-...+ ++... ...+ ...+|.+.. ...+ .-+++.+++.+.
T Consensus 141 ~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~--~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~ 218 (460)
T PRK06916 141 QNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFE--AIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLK 218 (460)
T ss_pred HhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCC--CEEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 13 467888887666643111100 00000 0001 122322200 0000 124566777775
Q ss_pred h--cCCcEEEEcC--CC-CCCc----cCHHHHHHHHHhcCCEEEEecccc-ccccccCCCCC-CCC-cceEEEeCCCCCC
Q 023191 193 L--FRPKLIVAGA--SA-YARL----YDYERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPS-PFE-YADVVTTTTHKSL 260 (286)
Q Consensus 193 ~--~~tk~v~i~~--~n-~g~~----~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~-~~~-~~D~v~~s~~K~l 260 (286)
. .++.+|++.| .. .|.. .-++++.++|++||+++|.|+++. +|-.. ..... .+. ..|+++ +.|.+
T Consensus 219 ~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG-~~~a~~~~gv~PDiv~--~gK~l 295 (460)
T PRK06916 219 EKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG-KMFACEHENVTPDIMT--AGKGL 295 (460)
T ss_pred hCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc-hhhHHHhcCCCCCeee--eehhh
Confidence 3 2577888876 23 3322 238899999999999999999974 22211 11000 011 278775 48988
Q ss_pred CCCC--ceEEEEecchhhhh
Q 023191 261 RGPR--GAMIFFRKGVKEIN 278 (286)
Q Consensus 261 ~gp~--gG~l~~~~~~~~~~ 278 (286)
+|.. -|++++++++.+..
T Consensus 296 ~gG~~Pi~av~~~~ei~~~~ 315 (460)
T PRK06916 296 TGGYLPIAITVTTDEIYNAF 315 (460)
T ss_pred hcCccccceeeecHHHHHHh
Confidence 6652 38888888876544
No 375
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.02 E-value=2.8e-05 Score=68.43 Aligned_cols=207 Identities=13% Similarity=0.057 Sum_probs=114.9
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCCC-CcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH--
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-- 123 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-- 123 (286)
...|+++|....|++|++.+.+.+.+....|.+- ...+.+ .....+-..+++.++++++++.+. .|.+..|+.
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRs-k~~~~v~~~a~~~lreLl~iPd~Y---~VlflqGGat~ 80 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRS-KEFKNVLEEAEKDLRELLNIPDDY---KVLFLQGGATG 80 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeecccc-HHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCccHH
Confidence 4678888888889999988887766532222111 011111 223345556778899999997764 677777655
Q ss_pred HHHHHHHHhcCCCCe--EEeccCCCCcccCccccccccccccceeeeEEEecc-cC-CCCCCCCHHHHHHHhhhcCCcEE
Q 023191 124 SNFQVYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LN-ESTGYIDYDQLEKSATLFRPKLI 199 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~-~~~~~~d~e~l~~~i~~~~tk~v 199 (286)
...++...++..+.. |..-. +.... + ..+...+......... .. .-+..+|++... +.+ +..-|
T Consensus 81 qf~~~p~nLl~~~~~~yv~~g~--Ws~~a------~-~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ayv 148 (365)
T COG1932 81 QFAMAPMNLLGKRGTDYVDTGA--WSEFA------I-KEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAYV 148 (365)
T ss_pred HHHHHHHhhhcccCceeEeeee--hhHhH------H-HHHHHhcccccccccceeccCccCCCChhhcc--cCC-CccEE
Confidence 444477777766543 33221 11110 0 0111111101111101 11 012345665543 333 34446
Q ss_pred EEcCCC--CCCccC-HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEecchh
Q 023191 200 VAGASA--YARLYD-YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (286)
Q Consensus 200 ~i~~~n--~g~~~~-l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~~~~ 275 (286)
.+|+.+ .|...+ ...+. . +.++++|.+..+...+.++.. .|++.++..|.+ ||.| ++++.|+++.
T Consensus 149 ~~~~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~ilsr~iDvsk-----~dviyagaQKnl-GpaGltvvIvr~~~l 217 (365)
T COG1932 149 HFCWNETISGVEVPELPDIG---S--DGLLVADASSAILSRPIDVSK-----YDVIYAGAQKNL-GPAGLTVVIVRPDLL 217 (365)
T ss_pred EEecCCcccceEccCCCCCC---C--CceEEEecccHHhcCCCChhH-----cceEEEehhhcc-CccceEEEEEcHHHH
Confidence 666444 453332 22221 1 278999999666655544433 789999999988 7888 9999999876
Q ss_pred hhhcc
Q 023191 276 EINKQ 280 (286)
Q Consensus 276 ~~~~~ 280 (286)
....+
T Consensus 218 ~r~~~ 222 (365)
T COG1932 218 ERAES 222 (365)
T ss_pred hcccc
Confidence 55543
No 376
>PRK06917 hypothetical protein; Provisional
Probab=98.01 E-value=0.00031 Score=65.45 Aligned_cols=205 Identities=14% Similarity=0.089 Sum_probs=107.7
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe-CCChHHHHHHHHHhc---
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTALL--- 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~-~sG~~a~~~~l~a~~--- 133 (286)
-.|+|.+++.+.+.... ..+.. .+. .+.+.++.+++.+.+....+ .+++ +||+.|+.++++...
T Consensus 48 ~hp~v~~Ai~~ql~~~~-~~~~~--~~~-----~~~~~~lae~L~~~~p~~~~----~v~f~~sGsEAve~AlklAr~~~ 115 (447)
T PRK06917 48 GVKEIADAIKEQAEEVS-FVYRS--QFT-----SEPAEKLAKKLSDLSPGDLN----WSFFVNSGSEANETAMKIAIQHF 115 (447)
T ss_pred CCHHHHHHHHHHHhhCc-Ccccc--ccC-----CHHHHHHHHHHHHhCCCCCC----EEEEeCChHHHHHHHHHHHHHHH
Confidence 47888888888776521 11100 011 13334466777777643222 3555 556667776666441
Q ss_pred -----CCCCeEEeccCCCCcccCccccc-----cccc--cccceeeeEEEecccCC-----CC-C---CCCHHHHHHHhh
Q 023191 134 -----KPHDRIMALDLPHGGHLSHGYQT-----DTKK--ISAVSIFFETMPYRLNE-----ST-G---YIDYDQLEKSAT 192 (286)
Q Consensus 134 -----~~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~v~~~~~~-----~~-~---~~d~e~l~~~i~ 192 (286)
....+|+.....|.+...-.... ++.. ..+.+ +..++.+... ++ . .-+++.+++.+.
T Consensus 116 ~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~ 193 (447)
T PRK06917 116 QERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLED--YPTISAPYCYRCPVQKVYPTCQLACATELETAIE 193 (447)
T ss_pred HhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCC--CeEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 22367888876666553111100 0000 00001 1112211100 00 0 013466777775
Q ss_pred hc---CCcEEEEcCC--CCC-C----ccCHHHHHHHHHhcCCEEEEeccccccc-cccCCCC-CCCC-cceEEEeCCCCC
Q 023191 193 LF---RPKLIVAGAS--AYA-R----LYDYERIRKVCNKQKAIMLADMAHISGL-VAAGVIP-SPFE-YADVVTTTTHKS 259 (286)
Q Consensus 193 ~~---~tk~v~i~~~--n~g-~----~~~l~~I~~ia~~~~~~vivD~a~~~g~-~~~~~~~-~~~~-~~D~v~~s~~K~ 259 (286)
.+ ++.+|++.|- +.| . ..-+++|.++|++||+++|.|+++. |. ....... ..+. ..|++++ .|.
T Consensus 194 ~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~--gK~ 270 (447)
T PRK06917 194 RIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTL--GKG 270 (447)
T ss_pred hcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEe--eeh
Confidence 32 5678888642 223 2 2238899999999999999999976 32 1111110 0011 2687654 899
Q ss_pred CCCC--CceEEEEecchhhhhc
Q 023191 260 LRGP--RGAMIFFRKGVKEINK 279 (286)
Q Consensus 260 l~gp--~gG~l~~~~~~~~~~~ 279 (286)
++|. +.|++++++++.+...
T Consensus 271 l~~G~~Pi~a~~~~~~i~~~~~ 292 (447)
T PRK06917 271 LGAGYTPIAATVVSDRVMEPIL 292 (447)
T ss_pred hccCCcceEEEEEcHHHHHHHh
Confidence 9765 3588888888776654
No 377
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.00 E-value=0.00021 Score=66.99 Aligned_cols=92 Identities=14% Similarity=0.104 Sum_probs=59.4
Q ss_pred HHHHHHHhhh--cCCcEEEEcC--CC-CCC----ccCHHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceE
Q 023191 184 YDQLEKSATL--FRPKLIVAGA--SA-YAR----LYDYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADV 251 (286)
Q Consensus 184 ~e~l~~~i~~--~~tk~v~i~~--~n-~g~----~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~ 251 (286)
++.+++.+.. .++.+|++.| .. .|. ..-++++.++|++||+++|.|+.+. +|-..... ....+ ..|+
T Consensus 223 ~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDi 301 (472)
T PRK08742 223 ADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDL 301 (472)
T ss_pred HHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCE
Confidence 5667777752 2577888876 22 332 2238899999999999999999975 33222110 11111 2788
Q ss_pred EEeCCCCCCCCCC--ceEEEEecchhhhh
Q 023191 252 VTTTTHKSLRGPR--GAMIFFRKGVKEIN 278 (286)
Q Consensus 252 v~~s~~K~l~gp~--gG~l~~~~~~~~~~ 278 (286)
+++ .|.++|.. -|.+++++++.+..
T Consensus 302 v~~--gKgl~gG~~Plaav~~~~ei~~~~ 328 (472)
T PRK08742 302 LCL--SKGLTGGFLPLSAVLATQQLYDAF 328 (472)
T ss_pred EEE--cccccCCCCCcceeeccHHHHHHh
Confidence 876 79886653 37788888876543
No 378
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.94 E-value=0.00032 Score=65.57 Aligned_cols=204 Identities=11% Similarity=0.110 Sum_probs=103.8
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEe--CCChHHHHHHHHHh--c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS--LSGSPSNFQVYTAL--L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~--~sG~~a~~~~l~a~--~ 133 (286)
-+|.+.+++.+.+.+..... .. .+. + +.+.++.+++.+....+... ...+++ .||+.|+..+++.. .
T Consensus 80 ~~p~v~~Ai~~ql~~~~~~~--~~-~~~-~----~~~~~la~~L~~~~p~~~~~-~~~v~f~~~SGSEAve~AlklAr~~ 150 (464)
T PRK06938 80 NHPVVIEAIQQVLADELPLH--TL-DLT-T----PVKDQFVQDLFASLPEAFAR-EAKIQFCGPTGTDAVEAALKLVKTA 150 (464)
T ss_pred CCHHHHHHHHHHHHhhhccc--cc-ccC-C----HHHHHHHHHHHHhCcccccc-cceEEEeCCCcHHHHHHHHHHHHHh
Confidence 47899999988775422111 00 011 1 22223445565554321100 002544 47887777655533 2
Q ss_pred CCCCeEEeccCCCCcccCccccc-----cccccc-cceeeeEEEecccCC-CCC--------CCCHHHHHHHhhhc----
Q 023191 134 KPHDRIMALDLPHGGHLSHGYQT-----DTKKIS-AVSIFFETMPYRLNE-STG--------YIDYDQLEKSATLF---- 194 (286)
Q Consensus 134 ~~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~-~~g~~~~~v~~~~~~-~~~--------~~d~e~l~~~i~~~---- 194 (286)
....+|+.....|.+...-...+ ++.... +.. .+..+|++... ..+ ..+++.+++.+.+.
T Consensus 151 tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 229 (464)
T PRK06938 151 TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLP-GVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGV 229 (464)
T ss_pred hCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCC-CcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCC
Confidence 34567888776666553111110 000000 000 12233332110 000 12367788877631
Q ss_pred -CCcEEEEcCCC--CCCc----cCHHHHHHHHHhcCCEEEEecccc-cccccc--CCCCCCCCcceEEEeCCCCCCCCCC
Q 023191 195 -RPKLIVAGASA--YARL----YDYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRGPR 264 (286)
Q Consensus 195 -~tk~v~i~~~n--~g~~----~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~v~~s~~K~l~gp~ 264 (286)
++.+|++.|-. -|.. .-++++.++|++||+++|.|+.+. +|-... .....++ -.|++++ .|.++|..
T Consensus 230 ~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~--gKglggG~ 306 (464)
T PRK06938 230 VLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVVL--SKAIGGSL 306 (464)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEEe--eccccCCC
Confidence 46788886332 2322 238899999999999999999975 222110 0011111 2788876 78886644
Q ss_pred c-eEEEEecch
Q 023191 265 G-AMIFFRKGV 274 (286)
Q Consensus 265 g-G~l~~~~~~ 274 (286)
. |++++++++
T Consensus 307 PlsAv~~~~~~ 317 (464)
T PRK06938 307 PLAVVVYREWL 317 (464)
T ss_pred ceEEEeehhHh
Confidence 4 777787765
No 379
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.77 E-value=0.0011 Score=62.10 Aligned_cols=202 Identities=13% Similarity=0.084 Sum_probs=100.9
Q ss_pred CCHHHHHHhccccccCCCCCCCCCcccCCcchHHHHHHHHHHHHHHHCCCC-CCCcceeEEe-CCChHHHHHHHHHh--c
Q 023191 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQS-LSGSPSNFQVYTAL--L 133 (286)
Q Consensus 58 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~v~~-~sG~~a~~~~l~a~--~ 133 (286)
-.|++.+++.+.+........ . .+ ..+.+.++.+++.+.+... .+. ..+++ .||+.|+.++++.. .
T Consensus 75 ~~p~v~~Ai~~q~~~~~~~~~--~-~~-----~~~~~~~lAe~L~~~~p~~~~~~--~~~f~~~SGsEAve~AlklAr~~ 144 (459)
T PRK06931 75 NHPDVLQSIQDVLTSGLPLHT--L-DL-----TTPLKDAFSEYLLSLLPGQGKEY--CLQFTGPSGADAVEAAIKLAKTY 144 (459)
T ss_pred CCHHHHHHHHHHHhhhccccc--c-cc-----CCHHHHHHHHHHHHhCCCccccc--eEEEeCCCcHHHHHHHHHHHHHh
Confidence 378899999887754210000 0 01 1133334667777776422 111 12355 57777777655533 3
Q ss_pred CCCCeEEeccCCCCcccCccccc-----ccccc--ccceeeeEEEecccCC-CCC----CCCHHHH----HHHhhh----
Q 023191 134 KPHDRIMALDLPHGGHLSHGYQT-----DTKKI--SAVSIFFETMPYRLNE-STG----YIDYDQL----EKSATL---- 193 (286)
Q Consensus 134 ~~Gd~Vl~~~~~~~~~~~~~~~~-----~~~~~--~~~g~~~~~v~~~~~~-~~~----~~d~e~l----~~~i~~---- 193 (286)
....+|+.....|.+...-.... ++... ...+ +..+|++... ..+ .-+.+.+ ++.+..
T Consensus 145 tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (459)
T PRK06931 145 TGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPG--VQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESG 222 (459)
T ss_pred cCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCC--cEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcC
Confidence 45567888877676653211100 10000 0111 2223322100 000 0123333 333321
Q ss_pred -cCCcEEEEcC--CCCCCcc----CHHHHHHHHHhcCCEEEEecccc-cccccc--CCCCCCCCcceEEEeCCCCCCCCC
Q 023191 194 -FRPKLIVAGA--SAYARLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKSLRGP 263 (286)
Q Consensus 194 -~~tk~v~i~~--~n~g~~~----~l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~v~~s~~K~l~gp 263 (286)
.++.+|++.| .+-|... -++++.++|++||+++|.|+.+. +|-... ......+ ..|++++ .|.++|.
T Consensus 223 ~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG 299 (459)
T PRK06931 223 VRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGG 299 (459)
T ss_pred CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCC
Confidence 1367788853 2233222 28899999999999999999975 332211 0011111 2788776 7888664
Q ss_pred Cc-eEEEEecch
Q 023191 264 RG-AMIFFRKGV 274 (286)
Q Consensus 264 ~g-G~l~~~~~~ 274 (286)
.. |++..++++
T Consensus 300 ~Pi~av~~~~~~ 311 (459)
T PRK06931 300 LPLAVLGIKKEF 311 (459)
T ss_pred cceeeeeeHHHH
Confidence 33 777777664
No 380
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.66 E-value=0.0011 Score=57.61 Aligned_cols=96 Identities=16% Similarity=0.227 Sum_probs=60.8
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCC--CCCccC----HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC--cceEEEe
Q 023191 183 DYDQLEKSATLFRPKLIVAGASA--YARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTT 254 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n--~g~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~v~~ 254 (286)
|.++|+..+++.+.+++++.|-. -|.+.| +++..++|.+||+++|.|+.|..-.....+..-..+ -.|+++.
T Consensus 195 d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivil 274 (427)
T KOG1402|consen 195 DAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVIL 274 (427)
T ss_pred CHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEE
Confidence 78999999987677888876333 443332 899999999999999999998632222222110111 1677764
Q ss_pred CCCCCCCCC-Cc-eEEEEecchhhhhcc
Q 023191 255 TTHKSLRGP-RG-AMIFFRKGVKEINKQ 280 (286)
Q Consensus 255 s~~K~l~gp-~g-G~l~~~~~~~~~~~~ 280 (286)
.|.|.|. .. ..+++.+++....|-
T Consensus 275 --gKalSGG~~Pvsavl~~~~im~~~~p 300 (427)
T KOG1402|consen 275 --GKALSGGVYPVSAVLADDDIMLNIKP 300 (427)
T ss_pred --eccccCCeeeeEEEEecHHHHhccCC
Confidence 5777553 22 555566665544553
No 381
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.52 E-value=0.0052 Score=57.03 Aligned_cols=83 Identities=14% Similarity=0.133 Sum_probs=51.6
Q ss_pred HHHHHHHhhh--cCCcEEEEc--CCCCCC----ccCHHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEE
Q 023191 184 YDQLEKSATL--FRPKLIVAG--ASAYAR----LYDYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVV 252 (286)
Q Consensus 184 ~e~l~~~i~~--~~tk~v~i~--~~n~g~----~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v 252 (286)
++++++.+.. .++.+|++. ..+.|. ...+++|.++|++||+++|+|++|. +|...... ....+ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv-~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-QPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCC-CCCEE
Confidence 4555666642 367888886 333343 2359999999999999999999987 43321110 01111 27888
Q ss_pred EeCCCCCCCCCCceEEEEe
Q 023191 253 TTTTHKSLRGPRGAMIFFR 271 (286)
Q Consensus 253 ~~s~~K~l~gp~gG~l~~~ 271 (286)
++ .|.+ |.+|++..+
T Consensus 284 ~~--gK~~--~~~g~~~~~ 298 (431)
T TIGR03251 284 AF--GKKT--QVCGIMAGR 298 (431)
T ss_pred Ee--cccC--ccceEEecc
Confidence 64 5655 555777554
No 382
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=97.41 E-value=0.0024 Score=58.61 Aligned_cols=95 Identities=18% Similarity=0.246 Sum_probs=56.6
Q ss_pred HHHHHHHhhhc---CCcEEEEcCCC---CCCc-cC---HHHHHHHHHhcCCEEEEecccccccccc-CCCC-CCCC-cce
Q 023191 184 YDQLEKSATLF---RPKLIVAGASA---YARL-YD---YERIRKVCNKQKAIMLADMAHISGLVAA-GVIP-SPFE-YAD 250 (286)
Q Consensus 184 ~e~l~~~i~~~---~tk~v~i~~~n---~g~~-~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~-~~~~-~~D 250 (286)
.++|+++|..+ +..++++.|-- -|.. .| ++++.++|++||+++|.|+. ..|.--- .++. ..+. ..|
T Consensus 200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~~FA~e~~gi~PD 278 (449)
T COG0161 200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTGKMFACEHAGIVPD 278 (449)
T ss_pred HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCchhhhhhhcCCCCC
Confidence 66788888763 44566665333 2322 22 89999999999999999998 2221100 1110 0000 156
Q ss_pred EEEeCCCCCCCCCCc--eEEEEecchhhhhccC
Q 023191 251 VVTTTTHKSLRGPRG--AMIFFRKGVKEINKQG 281 (286)
Q Consensus 251 ~v~~s~~K~l~gp~g--G~l~~~~~~~~~~~~~ 281 (286)
+++ ..|.+.|..- |.+++++++-+...++
T Consensus 279 i~~--~aKGLT~GY~Pl~a~l~~~~I~~~~~~~ 309 (449)
T COG0161 279 ILC--LAKGLTGGYLPLSAVLTSDRIYEAFSDG 309 (449)
T ss_pred eee--ecccccccchhhHhHhhhHHHHHHHhcc
Confidence 665 5688866544 7777777766655543
No 383
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.25 E-value=0.0071 Score=56.51 Aligned_cols=51 Identities=12% Similarity=0.218 Sum_probs=38.3
Q ss_pred CHHHHHHHhhhc--CCcEEEEcC--CCCCCccC----HHHHHHHHHhcCCEEEEecccc
Q 023191 183 DYDQLEKSATLF--RPKLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 183 d~e~l~~~i~~~--~tk~v~i~~--~n~g~~~~----l~~I~~ia~~~~~~vivD~a~~ 233 (286)
+++.+++++.++ ++.+|++.| .+.|...+ +++|.++|++||+++|+|++|.
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t 295 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQT 295 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeee
Confidence 456677777542 567888863 33454444 9999999999999999999984
No 384
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=96.95 E-value=0.03 Score=50.30 Aligned_cols=95 Identities=20% Similarity=0.201 Sum_probs=61.6
Q ss_pred CHHHHHHHhhhcC--CcEEEEcCCC-CCC-----ccCHHHHHHHHHhcCCEEEEeccccc-cccccCCCCCCCC-cceEE
Q 023191 183 DYDQLEKSATLFR--PKLIVAGASA-YAR-----LYDYERIRKVCNKQKAIMLADMAHIS-GLVAAGVIPSPFE-YADVV 252 (286)
Q Consensus 183 d~e~l~~~i~~~~--tk~v~i~~~n-~g~-----~~~l~~I~~ia~~~~~~vivD~a~~~-g~~~~~~~~~~~~-~~D~v 252 (286)
|..++++.++.++ ..+|++.|-. .|. ..-+..|.++|+++|+++|.|+.+.. |-.........+. ..|+.
T Consensus 192 d~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~ 271 (433)
T KOG1401|consen 192 DSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDIT 271 (433)
T ss_pred CHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcce
Confidence 7899999998855 5678886333 332 22377899999999999999999752 2111110000001 14554
Q ss_pred EeCCCCCCCCCCc-eEEEEecchhhhhc
Q 023191 253 TTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (286)
Q Consensus 253 ~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (286)
+.-|.++|.-- |+..+++++.+...
T Consensus 272 --t~aK~L~gGlPigA~~v~~kV~~~i~ 297 (433)
T KOG1401|consen 272 --TVAKPLGGGLPIGATGVRDKVAEMIS 297 (433)
T ss_pred --eehhhccCCceeEEEeehHHHHhhcC
Confidence 45688866544 88888888776555
No 385
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.63 E-value=0.033 Score=49.04 Aligned_cols=229 Identities=16% Similarity=0.169 Sum_probs=125.4
Q ss_pred hhhccccccccChHHHHHHHHHHHHH--HcCceecCC-------CCCCCHHHHHHhccccccCCCCCCCCCcccCCcchH
Q 023191 20 PKQLNAPLEVVDPEIADIIEHEKARQ--WKGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90 (286)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~-------e~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 90 (286)
+++|.+. .--||+.+--+.+..++. ...+||..| .++.=+.|++|-.+.+..... .-|.+-.+.
T Consensus 25 ~s~~s~V-~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ld------KEYlpI~Gl 97 (427)
T KOG1411|consen 25 SSWWSHV-EMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLD------KEYLPITGL 97 (427)
T ss_pred cchhhcC-CCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhccc------chhccccch
Confidence 3444333 333444444445444333 245788654 334567777776654432110 113444566
Q ss_pred HHHHHHHHHHHHHHCCCCCCCcc----eeEEeCCChHHHH--HHHHHhcCCCCeEEeccCCCCcccCccccccccccccc
Q 023191 91 DMAESLCQKRALEAFRLDPEKWG----VNVQSLSGSPSNF--QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (286)
Q Consensus 91 ~~l~~~~~~~~~~~~g~~~~~~~----~~v~~~sG~~a~~--~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
.++.+...+.+ ||-+.+... +.+...||+.++. +-|.+..-++..|.+++|.++-| ......+
T Consensus 98 ~eF~k~sakLa---~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh--------~~if~~a 166 (427)
T KOG1411|consen 98 AEFNKLSAKLA---LGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNH--------KNIFKDA 166 (427)
T ss_pred HHHHHHHHHHh---hcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCccccc--------Ccccccc
Confidence 67665544432 444221100 2355556665332 24444456799999999555444 3344556
Q ss_pred eeeeEEEecccCCCCCCCCHHHHHHHhhhcCC-cEEEE--cCCC-CC---CccCHHHHHHHHHhcCCEEEEecccccccc
Q 023191 165 SIFFETMPYRLNESTGYIDYDQLEKSATLFRP-KLIVA--GASA-YA---RLYDYERIRKVCNKQKAIMLADMAHISGLV 237 (286)
Q Consensus 165 g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~t-k~v~i--~~~n-~g---~~~~l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (286)
|..+....+ .++.+..+|.+.+.+.+.+.-. ..|++ |.+| +| +....++|.++.++.+.+-+.|.| +-|.-
T Consensus 167 g~~~~~yrY-yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA-YQGfa 244 (427)
T KOG1411|consen 167 GLPVKFYRY-YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA-YQGFA 244 (427)
T ss_pred Ccceeeeee-ccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh-hcccc
Confidence 655555543 3446778999887777765222 34444 4666 55 455688999999999999999998 34433
Q ss_pred ccCCCCCC------C-Ccce-EEEeCCCCCC--CCCCceEE
Q 023191 238 AAGVIPSP------F-EYAD-VVTTTTHKSL--RGPRGAMI 268 (286)
Q Consensus 238 ~~~~~~~~------~-~~~D-~v~~s~~K~l--~gp~gG~l 268 (286)
..++...- + .+.+ +++-|+-|.+ .|-+-|.+
T Consensus 245 SG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~ 285 (427)
T KOG1411|consen 245 SGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGAL 285 (427)
T ss_pred cCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhcccee
Confidence 33322110 0 1233 5677888876 34444554
No 386
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.61 E-value=0.0027 Score=55.80 Aligned_cols=157 Identities=14% Similarity=0.042 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcC----CC--CeEEeccCCCCcccCccccccccccc
Q 023191 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK----PH--DRIMALDLPHGGHLSHGYQTDTKKIS 162 (286)
Q Consensus 90 ~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~----~G--d~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
..+|++.+|+.-.-.=++..+. --|++++|++ ++.+++.++.. .+ -.|+... |.|+.|+....
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~g--r~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~a--------PYY~~Y~~qt~ 114 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDG--RYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAA--------PYYSSYPEQTD 114 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TT--SEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-S--------S--CHHHHHCC
T ss_pred cHHHHHHHHHHHHHhccccccC--cEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecC--------CCccchHHHHH
Confidence 4677777765444333443332 2599999999 77777777732 22 2566666 55555554433
Q ss_pred cceee-eEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCC
Q 023191 163 AVSIF-FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 241 (286)
Q Consensus 163 ~~g~~-~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~ 241 (286)
+..-. ++.. -|...+. + . +...+-+=+++.||||.-. +.+ .+++.-+..+|.|-|++.+....
T Consensus 115 ~f~s~~y~w~---Gda~~~~-~------~-~~~~~~IElVTSPNNPDG~-lr~--~V~~g~~~k~I~D~AYYWPhyTp-- 178 (363)
T PF04864_consen 115 FFDSRLYKWA---GDASNFK-N------S-DNPSPYIELVTSPNNPDGQ-LRE--AVLNGSSGKVIHDLAYYWPHYTP-- 178 (363)
T ss_dssp CT-BTTEEEE---EECCCGT-T--------S-CCGEEEEEESS-TTT---------SSTTTEEEEEEE-TT-STTTS---
T ss_pred hccccCcccc---ccHHhhc-c------C-CCCCCeEEEEeCCCCCccc-ccc--hhcCCCCcceeeeeeeecccccc--
Confidence 33211 1111 1111221 0 0 0102333356767766211 111 12344566789999988775531
Q ss_pred CCCCCCcceEEEeCCCCCCCCCCc---eEEEEecch
Q 023191 242 IPSPFEYADVVTTTTHKSLRGPRG---AMIFFRKGV 274 (286)
Q Consensus 242 ~~~~~~~~D~v~~s~~K~l~gp~g---G~l~~~~~~ 274 (286)
...+ ..-|+..++.+| +.|..| |+.++|++-
T Consensus 179 I~~~-aD~DiMLFT~SK-~TGHAGSR~GWAlVKD~~ 212 (363)
T PF04864_consen 179 ITAP-ADHDIMLFTLSK-LTGHAGSRFGWALVKDEE 212 (363)
T ss_dssp --S--B--SEEEEEHHH-HCS-GGG-EEEEEES-HH
T ss_pred cCCC-CCCceEEEEEec-ccCccccccceeeecCHH
Confidence 1112 125799999999 556555 999999863
No 387
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=96.59 E-value=0.011 Score=52.84 Aligned_cols=67 Identities=19% Similarity=0.158 Sum_probs=46.0
Q ss_pred HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEE--EeCCCCCCCCCCc-eEEEEecchhhhhcc
Q 023191 212 YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVV--TTTTHKSLRGPRG-AMIFFRKGVKEINKQ 280 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v--~~s~~K~l~gp~g-G~l~~~~~~~~~~~~ 280 (286)
+++..++|+++|.++|.|++|..--.. + +-+.++.-|++ +-+.-|.+++... |.+++..+..+.+.+
T Consensus 235 lka~~~~v~k~Ggl~IaDEVqtGfGRt-G-~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~ 304 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQTGFGRT-G-HMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQ 304 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhhhccccc-c-ccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHh
Confidence 899999999999999999998631111 1 33344422232 3345688876655 888888888877664
No 388
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=96.51 E-value=0.073 Score=53.18 Aligned_cols=91 Identities=16% Similarity=0.080 Sum_probs=57.1
Q ss_pred HHHHHHhhh-------cCCcEEEEcCC--CC-CCcc----CHHHHHHHHHhcCCEEEEeccccccc-cccCCCCCC-CC-
Q 023191 185 DQLEKSATL-------FRPKLIVAGAS--AY-ARLY----DYERIRKVCNKQKAIMLADMAHISGL-VAAGVIPSP-FE- 247 (286)
Q Consensus 185 e~l~~~i~~-------~~tk~v~i~~~--n~-g~~~----~l~~I~~ia~~~~~~vivD~a~~~g~-~~~~~~~~~-~~- 247 (286)
+.+++.+.+ .+..+|++.|- .. |... -++.+.++|++||+++|.|+++. |. -........ +.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~T-GfGRtG~~fa~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFT-GLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeeccc-CCCcccchhhHHhcCC
Confidence 556666642 25677888762 33 3222 28899999999999999999964 22 111111110 11
Q ss_pred cceEEEeCCCCCCCCCC--ceEEEEecchhhhh
Q 023191 248 YADVVTTTTHKSLRGPR--GAMIFFRKGVKEIN 278 (286)
Q Consensus 248 ~~D~v~~s~~K~l~gp~--gG~l~~~~~~~~~~ 278 (286)
..|+++ +.|.++|.. -|++++++++.+..
T Consensus 646 ~PDIi~--~gKgLtgG~~Plaa~l~~~~I~~~f 676 (817)
T PLN02974 646 KPDIAC--YAKLLTGGLVPLAATLATEEVFEAF 676 (817)
T ss_pred CCCEEe--ecccccCCCCccEEEEEcHHHHHhh
Confidence 267776 468887652 38888888877654
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.48 E-value=0.022 Score=54.07 Aligned_cols=155 Identities=12% Similarity=0.146 Sum_probs=94.2
Q ss_pred HHHHHHHHCCCCCCCcceeEEeCCChHHHHHHHHHh-cCCCCeEEeccCCCCcccCccccccccccccceeeeEEEeccc
Q 023191 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (286)
Q Consensus 97 ~~~~~~~~~g~~~~~~~~~v~~~sG~~a~~~~l~a~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (286)
.+..+.++.|++... .=+.--|+.+..++..+. .+.+.+.++....|+...+.... .+.-.|.+++
T Consensus 168 yQTmi~dlTGL~~aN---ASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~T----Ra~~~~i~v~------ 234 (1001)
T KOG2040|consen 168 YQTMITDLTGLPMAN---ASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKT----RAKGFGIKVV------ 234 (1001)
T ss_pred hHHhhhhccCCcccc---hhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhc----cccccceeEE------
Confidence 457788888887643 123345665444333333 67778888888888877653321 1122222211
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCC-cceEEE
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVT 253 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~v~ 253 (286)
..|+++..... + +...+++..++ .|.+.+..++++.+++.+..+++- ..+..+.+...|.+ |+|+++
T Consensus 235 -----~~~~~~~~~s~-~-~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~a----tDLLaLtiLrpPgefGaDIav 303 (1001)
T KOG2040|consen 235 -----VSDIKEADYSS-K-DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMA----TDLLALTILRPPGEFGADIAV 303 (1001)
T ss_pred -----ecCHHHhhccc-c-ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEe----ehhhHHHccCChhhcCceeee
Confidence 12333332222 2 46778887555 779999999999999999876653 22333344445545 699999
Q ss_pred eCCCC-----CCCCCCceEEEEecchh
Q 023191 254 TTTHK-----SLRGPRGAMIFFRKGVK 275 (286)
Q Consensus 254 ~s~~K-----~l~gp~gG~l~~~~~~~ 275 (286)
+|+.. .++||..||+.+++++.
T Consensus 304 GSsQRFGVPlGYGGPHAaFfAv~~~l~ 330 (1001)
T KOG2040|consen 304 GSSQRFGVPLGYGGPHAAFFAVSESLV 330 (1001)
T ss_pred ccccccCccccCCCchHHHHHHHHHHH
Confidence 99987 23566667777766544
No 390
>PRK08297 L-lysine aminotransferase; Provisional
Probab=96.46 E-value=0.005 Score=57.36 Aligned_cols=83 Identities=14% Similarity=0.157 Sum_probs=51.8
Q ss_pred HHHHHHHhhh--cCCcEEEEc--CCCCCC----ccCHHHHHHHHHhcCCEEEEecccc-ccccccCC--CCCCCCcceEE
Q 023191 184 YDQLEKSATL--FRPKLIVAG--ASAYAR----LYDYERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVV 252 (286)
Q Consensus 184 ~e~l~~~i~~--~~tk~v~i~--~~n~g~----~~~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~v 252 (286)
++++++.+.. .++.+|++. ..+-|. ...+++|.++|++||+++|.|+++. +|-..... ...++ ..|++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv 290 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDIV 290 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCEE
Confidence 4566677753 367888886 333342 2348999999999999999999975 33321110 01111 27888
Q ss_pred EeCCCCCCCCCCceEEEEe
Q 023191 253 TTTTHKSLRGPRGAMIFFR 271 (286)
Q Consensus 253 ~~s~~K~l~gp~gG~l~~~ 271 (286)
+ +.|.+ |.+|++..+
T Consensus 291 ~--~gK~l--~~~a~l~~~ 305 (443)
T PRK08297 291 A--FGKKT--QVCGIMAGR 305 (443)
T ss_pred E--ecccc--cccceecch
Confidence 6 48877 345666554
No 391
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=95.79 E-value=0.066 Score=46.62 Aligned_cols=142 Identities=16% Similarity=0.208 Sum_probs=83.5
Q ss_pred eEEeCCChHHHHH---HHHHhcCCCCeEEeccCCCCcccCccccccccccccce-eeeEEEecccCCCCCCCCHHHHHHH
Q 023191 115 NVQSLSGSPSNFQ---VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS-IFFETMPYRLNESTGYIDYDQLEKS 190 (286)
Q Consensus 115 ~v~~~sG~~a~~~---~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~d~e~l~~~ 190 (286)
.|...+|+.|+.. .+..+++ ...|.+..|.+..|.. ..+-+| ..+...++ .+.++..+|++.+...
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~--------if~~aGf~tv~~Y~y-Wd~~~k~~d~e~~Lsd 171 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHA--------IFEKAGFTTVATYPY-WDAENKCVDLEGFLSD 171 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHH--------HHHHcCCceeeeeee-ecCCCceecHHHHHHH
Confidence 3566666664432 3334444 5668888855544432 222333 22333443 3445678999999888
Q ss_pred hhhcCC-cEEE-E--cCCC-CC---CccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCC------C-cc-eEEEe
Q 023191 191 ATLFRP-KLIV-A--GASA-YA---RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF------E-YA-DVVTT 254 (286)
Q Consensus 191 i~~~~t-k~v~-i--~~~n-~g---~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~------~-~~-D~v~~ 254 (286)
+.. .| +.|+ + |.+| +| +.....+|++..++.+.+.+.|.| +-|.-..+.....+ + +. =+++-
T Consensus 172 l~~-APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~DawAiR~fV~~g~e~fv~Q 249 (410)
T KOG1412|consen 172 LES-APEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDADAWAIRYFVEQGFELFVCQ 249 (410)
T ss_pred Hhh-CCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh-hcccccCCccccHHHHHHHHhcCCeEEEEh
Confidence 876 44 3343 3 3566 55 344577899999999999999998 44544444322111 1 22 26788
Q ss_pred CCCCCC--CCCCceEE
Q 023191 255 TTHKSL--RGPRGAMI 268 (286)
Q Consensus 255 s~~K~l--~gp~gG~l 268 (286)
|+.|.| .+++-|-+
T Consensus 250 SFaKNfGlYneRvGnl 265 (410)
T KOG1412|consen 250 SFAKNFGLYNERVGNL 265 (410)
T ss_pred hhhhhcccccccccce
Confidence 999976 45665543
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.40 E-value=0.016 Score=49.18 Aligned_cols=92 Identities=16% Similarity=0.152 Sum_probs=63.1
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEE-E-c-CCCC-C-CccCHHHHHHHHHhcCCEEEEecccccccc------ccCCCCC
Q 023191 176 NESTGYIDYDQLEKSATLFRPKLIV-A-G-ASAY-A-RLYDYERIRKVCNKQKAIMLADMAHISGLV------AAGVIPS 244 (286)
Q Consensus 176 ~~~~~~~d~e~l~~~i~~~~tk~v~-i-~-~~n~-g-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~------~~~~~~~ 244 (286)
+.+...-|++.+++.+.+-.+..|+ + + .+-+ | ....+++|+.||..|+++-++..|++.-.. ...-...
T Consensus 135 d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~g 214 (432)
T KOG3843|consen 135 DGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECG 214 (432)
T ss_pred cchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhc
Confidence 4344567999999999875565443 3 2 2223 3 456699999999999999999998543211 1111112
Q ss_pred CCCcceEEEeCCCCCCCCCCceEEEE
Q 023191 245 PFEYADVVTTTTHKSLRGPRGAMIFF 270 (286)
Q Consensus 245 ~~~~~D~v~~s~~K~l~gp~gG~l~~ 270 (286)
. +|.++-|..|.|..|-||.+..
T Consensus 215 r---ida~vqsldknf~vpvggaiia 237 (432)
T KOG3843|consen 215 R---IDAFVQSLDKNFMVPVGGAIIA 237 (432)
T ss_pred c---HHHHHHHhhhcceeecchhHhh
Confidence 2 8999999999999999966543
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=95.25 E-value=0.05 Score=48.13 Aligned_cols=72 Identities=18% Similarity=0.264 Sum_probs=48.3
Q ss_pred HHHHHHHhhhcC----C-cEEEEc------CCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCC---CCCCC-c
Q 023191 184 YDQLEKSATLFR----P-KLIVAG------ASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---PSPFE-Y 248 (286)
Q Consensus 184 ~e~l~~~i~~~~----t-k~v~i~------~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~---~~~~~-~ 248 (286)
++++|++|.+++ | .++++. ..|.+...-++.+.+++++|++.+|+|+.|..|--...+. .+.++ =
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 567777776532 3 456663 2334466679999999999999999999998665444432 12232 2
Q ss_pred ceEEEeC
Q 023191 249 ADVVTTT 255 (286)
Q Consensus 249 ~D~v~~s 255 (286)
.|++++|
T Consensus 335 pD~vTFS 341 (484)
T KOG1405|consen 335 PDVVTFS 341 (484)
T ss_pred ccceehh
Confidence 7888765
No 394
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=95.09 E-value=0.11 Score=45.12 Aligned_cols=65 Identities=17% Similarity=0.250 Sum_probs=42.1
Q ss_pred HHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCc----ceEEEeCCCCCCCC-CCceEEEEecchhhhhc
Q 023191 212 YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEY----ADVVTTTTHKSLRG-PRGAMIFFRKGVKEINK 279 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~----~D~v~~s~~K~l~g-p~gG~l~~~~~~~~~~~ 279 (286)
++++++..+.+|-+.|.|+.|. |.--.+.+-|.+.- .|+++ ..|-++. .+-+.+.+.+++.++..
T Consensus 232 Fq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fiPDIVt--mgKpmGNGhPVa~VattkeIA~Af~ 301 (452)
T KOG1403|consen 232 FQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFIPDIVT--MGKPMGNGHPVAAVATTKEIAQAFH 301 (452)
T ss_pred HHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhccccchhe--ecccCCCCCeeeEEeccHHHHHHhc
Confidence 7899999999999999999974 33222333333331 45554 3465543 33488888887776554
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=94.22 E-value=0.44 Score=41.13 Aligned_cols=202 Identities=17% Similarity=0.133 Sum_probs=103.0
Q ss_pred cCceecCCCCCCCHHHHHHhccccccCCCCCCC-CCcccCCcchHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCC-hH-
Q 023191 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYP-GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG-SP- 123 (286)
Q Consensus 47 ~~i~L~~~e~~~~~~v~~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG-~~- 123 (286)
..+|+.+|.-.+|..|+..+.+.+-+-..-|-. ....+.+ .....+-+.....+.++++++... .|++.-| .+
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRs-k~f~kii~~tes~lreLlniPdn~---~vlf~QGGGt~ 82 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRS-KDFAKIINDTESLLRELLNIPDNY---KVLFLQGGGTG 82 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccc-hhHHHHHHHHHHHHHHHHcCCCce---eEEEEeCCCcc
Confidence 578998888889999999888877662211211 0111112 222344445557788888986543 5666333 33
Q ss_pred HHHHHHHHh--cCCC---CeEEeccCCCCcccCccccccc-cccccceeeeEEEecccCCCC--CCCCHHHHHHHhhhcC
Q 023191 124 SNFQVYTAL--LKPH---DRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNEST--GYIDYDQLEKSATLFR 195 (286)
Q Consensus 124 a~~~~l~a~--~~~G---d~Vl~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~--~~~d~e~l~~~i~~~~ 195 (286)
-..++...+ ++.| |-|++-. |.... ..+.-.|...++.+ +...-+ -.+|.+.++. ++ +
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVTGs----------WS~KA~~EAkk~~~~~~V~~-~~k~y~ygkvPd~~~w~~--~~-d 148 (370)
T KOG2790|consen 83 QFAAVPLNLIGLKHGRCADYVVTGS----------WSAKAAEEAKKYGTPNIVIP-KLKSYTYGKVPDPSTWEL--NP-D 148 (370)
T ss_pred cccccchhhhccccCCccceEEecc----------ccHHHHHHHHhhCCceEEec-cccccccCcCCChhhccc--CC-C
Confidence 222233333 3555 3344311 11000 01122222122222 222122 2456665543 22 4
Q ss_pred CcEEEEcCCC--CCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCCCCCCCCc-eEEEEec
Q 023191 196 PKLIVAGASA--YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (286)
Q Consensus 196 tk~v~i~~~n--~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K~l~gp~g-G~l~~~~ 272 (286)
.+.|+.|... .|...+ ++- +-.-++.+++.|-+.-+-.-+.|+.. -++++....|.+ ||-| -++++|+
T Consensus 149 a~yvyyCaNETVHGVEf~--~~P-~~~~~~~vlVaDmSSnflSrpvDvsk-----~gvi~aGAQKN~-G~aG~Tvvivr~ 219 (370)
T KOG2790|consen 149 ASYVYYCANETVHGVEFD--FIP-VNDPKGAVLVADMSSNFLSRPVDVSK-----FGVIFAGAQKNV-GPAGVTVVIVRK 219 (370)
T ss_pred ccEEEEecCceeeceecC--CCC-CCCCCCceEEEecccchhcCCccchh-----cceEEecccccc-CccccEEEEEeh
Confidence 5677777333 342221 100 12346889999987433333333322 458999999988 6777 8888888
Q ss_pred chh
Q 023191 273 GVK 275 (286)
Q Consensus 273 ~~~ 275 (286)
++.
T Consensus 220 dll 222 (370)
T KOG2790|consen 220 DLL 222 (370)
T ss_pred hhh
Confidence 754
No 396
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=79.95 E-value=6.6 Score=35.81 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=36.0
Q ss_pred CHHHHHHHhhh--cCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 183 DYDQLEKSATL--FRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 183 d~e~l~~~i~~--~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+...|.+.+.. .+.++++++--+-|...+.+.+.++|+++|++|++|-=
T Consensus 129 ~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 129 DENKLLEKIKNALKSFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred hHHHHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHcCCcEEECCC
Confidence 44444444433 25688888755567777899999999999999999953
No 397
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=78.87 E-value=5.2 Score=36.82 Aligned_cols=48 Identities=10% Similarity=0.140 Sum_probs=31.0
Q ss_pred CCcEEEEcCCCCCCccCHHHHHHHHHhcCC--EEEEeccccccccccCCCC
Q 023191 195 RPKLIVAGASAYARLYDYERIRKVCNKQKA--IMLADMAHISGLVAAGVIP 243 (286)
Q Consensus 195 ~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~--~vivD~a~~~g~~~~~~~~ 243 (286)
++|+++|+|-.- ....++.+..-.++++. +++||+||+...+.-++.+
T Consensus 113 ~~K~LYITPE~A-At~~FQ~lLn~L~~r~~L~Y~vVDEAHCVSQWGHDFRP 162 (641)
T KOG0352|consen 113 TIKMLYITPEGA-ATDGFQKLLNGLANRDVLRYIVVDEAHCVSQWGHDFRP 162 (641)
T ss_pred ceeEEEEchhhh-hhhhHHHHHHHHhhhceeeeEEechhhhHhhhccccCc
Confidence 568999975442 22335555555555554 6999999998777655544
No 398
>PRK09375 quinolinate synthetase; Provisional
Probab=73.82 E-value=18 Score=32.17 Aligned_cols=58 Identities=12% Similarity=0.138 Sum_probs=36.3
Q ss_pred EEeCCChH--HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh
Q 023191 116 VQSLSGSP--SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (286)
Q Consensus 116 v~~~sG~~--a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~ 193 (286)
+++-.|.. |-. ..+++|+.+|++|+ +.. ++.++ ...+.++++++.++
T Consensus 70 ~IvfcGV~FMaEt---AkIL~p~k~VllP~--------~~A-----gC~mA---------------d~~~~~~i~~lk~~ 118 (319)
T PRK09375 70 TIVFCGVHFMAET---AKILSPEKTVLLPD--------LEA-----GCSLA---------------DMCPAEEFRAFKEA 118 (319)
T ss_pred EEEEecceehhhh---HHhcCCCCeEECCC--------CCC-----CCccc---------------ccCCHHHHHHHHHH
Confidence 55557877 333 26688999999988 321 11111 25677888887776
Q ss_pred cCCcEEEEcCCC
Q 023191 194 FRPKLIVAGASA 205 (286)
Q Consensus 194 ~~tk~v~i~~~n 205 (286)
.+.+++++..|
T Consensus 119 -~p~a~vVaYvN 129 (319)
T PRK09375 119 -HPDATVVTYVN 129 (319)
T ss_pred -CCCCEEEEEeC
Confidence 66666665444
No 399
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=67.06 E-value=20 Score=26.42 Aligned_cols=50 Identities=8% Similarity=-0.005 Sum_probs=37.1
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc---CCEEEEecc
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADMA 231 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~---~~~vivD~a 231 (286)
+..+++.+.+.+.++.+|.++.++......+.++++.+++. ++.+++=+.
T Consensus 37 ~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~ 89 (119)
T cd02067 37 VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGA 89 (119)
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 56778887777779999999866655666778888888876 455666554
No 400
>PLN02672 methionine S-methyltransferase
Probab=66.19 E-value=74 Score=33.37 Aligned_cols=132 Identities=11% Similarity=0.052 Sum_probs=75.6
Q ss_pred chHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHH------HhcCCCCeEEeccCCCCcccCcccccc---
Q 023191 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYT------ALLKPHDRIMALDLPHGGHLSHGYQTD--- 157 (286)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~------a~~~~Gd~Vl~~~~~~~~~~~~~~~~~--- 157 (286)
.+-..++..+...++.+++++-.+ .+|++-..-. |+..+++ ++++.+-..-.+. -|....
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 495 (1082)
T PLN02672 426 AGSKRFRNLIAGFMRIYHHIPLTP--DNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK--------KWLTSLAIE 495 (1082)
T ss_pred ccchHHHHHHHHHHHHhcCCcCCc--cceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH--------HHHhHhhhh
Confidence 455678888899999999985443 4677777766 7754444 3344442222221 111100
Q ss_pred -ccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CccCHHHHHHHHHhcCCEEEEeccccc
Q 023191 158 -TKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHIS 234 (286)
Q Consensus 158 -~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~~~n~g--~~~~l~~I~~ia~~~~~~vivD~a~~~ 234 (286)
.....-.+..+.++.-+ .+-| .+.+++++.+|++|+.+-..+- +..-++.|.+.+++.|+.++.|.+...
T Consensus 496 ~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1082)
T PLN02672 496 NATSDSKSDDVITVIEAP-----RQSD--LVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHL 568 (1082)
T ss_pred cccccCccCCeEEEEeCC-----Ccch--HHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhhe
Confidence 00111112222222211 1223 5677788778999987522211 334588999999999999999998654
Q ss_pred cc
Q 023191 235 GL 236 (286)
Q Consensus 235 g~ 236 (286)
..
T Consensus 569 ~~ 570 (1082)
T PLN02672 569 EL 570 (1082)
T ss_pred ee
Confidence 43
No 401
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=64.19 E-value=15 Score=26.95 Aligned_cols=52 Identities=13% Similarity=0.223 Sum_probs=39.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc--CCEEEEecccc
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMAHI 233 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~--~~~vivD~a~~ 233 (286)
.+.+++.+.+.+.++.+|.++.+..+......++++.+++. ++.+++=+.|.
T Consensus 38 ~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 38 VPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp B-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 35588888887779999999754555556678888888776 78999888763
No 402
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=64.09 E-value=22 Score=26.21 Aligned_cols=49 Identities=20% Similarity=0.228 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..++++++++.+.. +|-.|++....+|...-.++..+++++.++-|++-
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 57999999999988 89888887555676666778889999999776654
No 403
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=63.78 E-value=19 Score=29.86 Aligned_cols=69 Identities=17% Similarity=0.162 Sum_probs=47.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCcc-CHHHHHHHHHhcCCEEEEeccccccccccCC--CCCCCCcceEEEeCCC
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLY-DYERIRKVCNKQKAIMLADMAHISGLVAAGV--IPSPFEYADVVTTTTH 257 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~-~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~--~~~~~~~~D~v~~s~~ 257 (286)
.+.+++++++... ...+|.+..+--.+.. +++++.+-.|.+|.+++.|++.. ..++ +.. |+|++-++++
T Consensus 85 TptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~----ee~l~a~~~---G~D~IGTTLs 156 (229)
T COG3010 85 TPTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTF----EEGLNAHKL---GFDIIGTTLS 156 (229)
T ss_pred cccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCH----HHHHHHHHc---CCcEEecccc
Confidence 4567888888876 7778877644433333 88999888888899999999832 1111 122 4888866554
No 404
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=63.67 E-value=32 Score=28.09 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=46.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCCC
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK 258 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~K 258 (286)
.+.++++++++.. ...+|-+..++-.+..+++++.+-.|++..+++.|++....... -... |+|++..+++=
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~--A~~~---G~D~I~TTLsG 122 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAIN--AAEL---GFDIIGTTLSG 122 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHH--HHHT---T-SEEE-TTTT
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHH--HHHc---CCCEEEccccc
Confidence 6789999999887 88899997666444488999999999988999999984322111 0112 38988776653
No 405
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=60.72 E-value=65 Score=26.55 Aligned_cols=88 Identities=3% Similarity=0.010 Sum_probs=51.6
Q ss_pred HHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhhc----CCcEEEEcC
Q 023191 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF----RPKLIVAGA 203 (286)
Q Consensus 128 ~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~----~tk~v~i~~ 203 (286)
.+......|.+|++..+.....++..... .-.|.+...+.++ +..++-+.+... .+.+|++..
T Consensus 24 r~~~~~~~g~~v~vfkp~iD~R~~~~~V~-----Sr~G~~~~A~~i~--------~~~~i~~~i~~~~~~~~~~~v~IDE 90 (201)
T COG1435 24 RARRYKEAGMKVLVFKPAIDTRYGVGKVS-----SRIGLSSEAVVIP--------SDTDIFDEIAALHEKPPVDCVLIDE 90 (201)
T ss_pred HHHHHHHcCCeEEEEecccccccccceee-----eccCCcccceecC--------ChHHHHHHHHhcccCCCcCEEEEeh
Confidence 44555678888988886665554433311 1223222222222 223344444331 156888887
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.++....-+..+.+++.++|+.||+
T Consensus 91 aQF~~~~~v~~l~~lad~lgi~Vi~ 115 (201)
T COG1435 91 AQFFDEELVYVLNELADRLGIPVIC 115 (201)
T ss_pred hHhCCHHHHHHHHHHHhhcCCEEEE
Confidence 7766555688888999999999985
No 406
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=59.26 E-value=44 Score=24.95 Aligned_cols=49 Identities=16% Similarity=0.058 Sum_probs=35.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
.++.+++++.+.. +|.+|++..-..+....-.++.+..+++|+-+.+-.
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~ 93 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLP 93 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcC
Confidence 6899999999987 899999873333333345667778888998777633
No 407
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=58.00 E-value=84 Score=27.86 Aligned_cols=95 Identities=14% Similarity=0.058 Sum_probs=60.7
Q ss_pred eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhhh
Q 023191 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (286)
Q Consensus 115 ~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~ 193 (286)
.|++|.|+. .-.+....+++.|-+|++.+.-..++..... ....+.+ .....|-+.|.+.+.+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~----------~~~~~f~------~gDi~D~~~L~~vf~~ 65 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL----------KLQFKFY------EGDLLDRALLTAVFEE 65 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh----------hccCceE------EeccccHHHHHHHHHh
Confidence 378888887 5555888899999999999866666543211 0001111 1234588889999988
Q ss_pred cCCcEEEEc--CCCCC--CccCH----------HHHHHHHHhcCCE
Q 023191 194 FRPKLIVAG--ASAYA--RLYDY----------ERIRKVCNKQKAI 225 (286)
Q Consensus 194 ~~tk~v~i~--~~n~g--~~~~l----------~~I~~ia~~~~~~ 225 (286)
+++.+|+-- ....| ...|+ -.|.+.|+++++.
T Consensus 66 ~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 66 NKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred cCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC
Confidence 888887742 22244 22333 2678889999874
No 408
>TIGR03586 PseI pseudaminic acid synthase.
Probab=57.25 E-value=90 Score=27.93 Aligned_cols=91 Identities=19% Similarity=0.203 Sum_probs=52.3
Q ss_pred CCCCHHHHHHHhh---h-cCCcEEEE-cCCCCC---CccCHHHHHHHHHhcCCEE-EEeccccccccccCCCCCCCCcce
Q 023191 180 GYIDYDQLEKSAT---L-FRPKLIVA-GASAYA---RLYDYERIRKVCNKQKAIM-LADMAHISGLVAAGVIPSPFEYAD 250 (286)
Q Consensus 180 ~~~d~e~l~~~i~---~-~~tk~v~i-~~~n~g---~~~~l~~I~~ia~~~~~~v-ivD~a~~~g~~~~~~~~~~~~~~D 250 (286)
+.-++++++.++. + .+.+++++ |.+++| ...++..|..+-++++++| ++| |..|.... +.. -..|++
T Consensus 142 G~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~~~~-~aA-va~GA~ 217 (327)
T TIGR03586 142 GIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGILAP-VAA-VALGAC 217 (327)
T ss_pred CCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCchHHH-HHH-HHcCCC
Confidence 4457777777653 2 23466666 466666 3457888888888899988 888 77664211 000 001466
Q ss_pred EE--EeCCCCCCCCCCceEEEEecch
Q 023191 251 VV--TTTTHKSLRGPRGAMIFFRKGV 274 (286)
Q Consensus 251 ~v--~~s~~K~l~gp~gG~l~~~~~~ 274 (286)
++ -+++.|.+.||-.-.-+..+++
T Consensus 218 iIEkH~tld~~l~G~D~~~Sl~p~e~ 243 (327)
T TIGR03586 218 VIEKHFTLDRSDGGVDSAFSLEPDEF 243 (327)
T ss_pred EEEeCCChhhcCCCCChhccCCHHHH
Confidence 55 4456676766644333333333
No 409
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=57.14 E-value=30 Score=32.80 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc--CCEEEEecccc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMAHI 233 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~--~~~vivD~a~~ 233 (286)
..++.+++.+.+.+.+|.+|.++. .++......++++.+++. ++.||+=+.|.
T Consensus 48 ~~~~~~~~~~~l~~~~pdvVgis~-~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~ 102 (497)
T TIGR02026 48 GPLTDEKLVERLRAHCPDLVLITA-ITPAIYIACETLKFARERLPNAIIVLGGIHP 102 (497)
T ss_pred cCCCHHHHHHHHHhcCcCEEEEec-CcccHHHHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 356778888888777899998862 234445567888888887 89999988875
No 410
>smart00642 Aamy Alpha-amylase domain.
Probab=56.58 E-value=11 Score=30.11 Aligned_cols=26 Identities=8% Similarity=0.344 Sum_probs=22.7
Q ss_pred CCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 206 ~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+|+..+++++++-||++|+-||.|.+
T Consensus 66 ~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 66 FGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 45667799999999999999999987
No 411
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=56.26 E-value=58 Score=25.00 Aligned_cols=50 Identities=10% Similarity=0.105 Sum_probs=36.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc---CCEEEEecc
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADMA 231 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~---~~~vivD~a 231 (286)
+.++++.+.+.+.++.+|.++..++.....++++.+.+++. ++.+++=++
T Consensus 41 vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~ 93 (137)
T PRK02261 41 TSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGN 93 (137)
T ss_pred CCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECC
Confidence 56788888887779999999866655556677887887776 555665443
No 412
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=54.74 E-value=22 Score=25.83 Aligned_cols=50 Identities=4% Similarity=0.069 Sum_probs=39.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..++.++++++...-..++-+.+...|.+.+..+|+++|+++|+.+..=.
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~ 53 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHS 53 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecC
Confidence 35778888888873456777777677888889999999999999887766
No 413
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=54.49 E-value=35 Score=25.16 Aligned_cols=13 Identities=31% Similarity=0.600 Sum_probs=9.5
Q ss_pred HhcCCCCeEEecc
Q 023191 131 ALLKPHDRIMALD 143 (286)
Q Consensus 131 a~~~~Gd~Vl~~~ 143 (286)
-+..+||.|++..
T Consensus 76 r~~~~GD~vII~s 88 (111)
T cd06919 76 RLGQPGDRVIIMA 88 (111)
T ss_pred hcCCCCCEEEEEE
Confidence 3467888888765
No 414
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=54.23 E-value=35 Score=25.58 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=10.1
Q ss_pred HHhcCCCCeEEecc
Q 023191 130 TALLKPHDRIMALD 143 (286)
Q Consensus 130 ~a~~~~Gd~Vl~~~ 143 (286)
.-++.+||.|++..
T Consensus 75 Arl~~~GD~VII~s 88 (126)
T COG0853 75 ARLVQVGDLVIIMS 88 (126)
T ss_pred HhhCCCCCEEEEEE
Confidence 34567888888865
No 415
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=53.37 E-value=9.3 Score=32.98 Aligned_cols=28 Identities=11% Similarity=0.360 Sum_probs=24.4
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+.+|+..+++++++.||++|+.||.|.+
T Consensus 46 ~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 46 PRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccchhhhhhhhhhccccccceEEEeee
Confidence 3456677899999999999999999998
No 416
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=53.16 E-value=20 Score=27.10 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=21.6
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 187 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 187 l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
+++.+.. ++-+|+++-.. .+.+++.++|++++++++.=
T Consensus 74 l~~l~~~-~~P~iIvt~~~----~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 74 LEKLFSY-NPPCIIVTRGL----EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp HHHHCTT-T-S-EEEETTT-------HHHHHHHHHCT--EEEE
T ss_pred HHHHhCC-CCCEEEEECcC----CCCHHHHHHHHHhCCcEEEc
Confidence 3444444 77788886322 56889999999999987753
No 417
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=52.98 E-value=69 Score=24.50 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=37.4
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC----HHHHH-HHHHhc-CCE-EEEecccc
Q 023191 179 TGYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD----YERIR-KVCNKQ-KAI-MLADMAHI 233 (286)
Q Consensus 179 ~~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~----l~~I~-~ia~~~-~~~-vivD~a~~ 233 (286)
+...+++.|.+.+.++++..++++ |.| .|...+ +.+.+ ++.++. ++. .++||-.+
T Consensus 35 ~~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 35 NREKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred CCchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 346799999999999889999997 666 564433 23333 333444 774 78999744
No 418
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=52.71 E-value=12 Score=35.31 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=25.4
Q ss_pred CCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 204 ~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+++|+..+++++++.||++|+.||.|.+
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5577788899999999999999999998
No 419
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=52.17 E-value=40 Score=30.48 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=39.6
Q ss_pred CCCHHHHHHHhh----hcCCcEEEEcC-----C-CCC-CccCHHHHHHHHHhcCCEEEEeccccccccc
Q 023191 181 YIDYDQLEKSAT----LFRPKLIVAGA-----S-AYA-RLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (286)
Q Consensus 181 ~~d~e~l~~~i~----~~~tk~v~i~~-----~-n~g-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (286)
..+++++..++. ..+.+++++.. . .++ ...++..|..+-+..+++||+|.+|+.|...
T Consensus 218 ~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~sd 286 (352)
T PRK13396 218 AATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKSE 286 (352)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcHH
Confidence 347777766553 22556666521 2 234 4568999988877779999999999988554
No 420
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed
Probab=51.94 E-value=30 Score=31.12 Aligned_cols=51 Identities=6% Similarity=-0.022 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCC-ccCHHHHHHHHHhcCCEEEEecc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYAR-LYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~-~~~l~~I~~ia~~~~~~vivD~a 231 (286)
..+|+.-..+++.. ....|=+||-|.|. ...++++++.|+++++.+=+---
T Consensus 87 IHFd~~lAl~a~~~-G~~~iRINPGNig~~~~~v~~vv~~ak~~~ipIRIGvN 138 (360)
T PRK00366 87 IHFDYRLALAAAEA-GADALRINPGNIGKRDERVREVVEAAKDYGIPIRIGVN 138 (360)
T ss_pred cCCCHHHHHHHHHh-CCCEEEECCCCCCchHHHHHHHHHHHHHCCCCEEEecC
Confidence 45666666666655 67788889999886 67799999999999988765433
No 421
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=51.80 E-value=55 Score=24.92 Aligned_cols=50 Identities=10% Similarity=0.117 Sum_probs=37.4
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcC---CEEEEecc
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLADMA 231 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~---~~vivD~a 231 (286)
..++++-+...++++.+|.++.-++.....++++.+.+++.+ +.+++=++
T Consensus 37 v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~ 89 (128)
T cd02072 37 SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGN 89 (128)
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECC
Confidence 567888777777799999887666666677888888888874 45666554
No 422
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=51.58 E-value=49 Score=23.64 Aligned_cols=73 Identities=10% Similarity=0.074 Sum_probs=40.9
Q ss_pred cEEEEcCCCCCCccCH-HHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCC--CCCCCCCceEEEEecc
Q 023191 197 KLIVAGASAYARLYDY-ERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRKG 273 (286)
Q Consensus 197 k~v~i~~~n~g~~~~l-~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~--K~l~gp~gG~l~~~~~ 273 (286)
|++..|.+-.|+-.=+ ..|-++++++|+.+-+|.. ..+.. .....++|+++.|.| ..|.....|.++.-..
T Consensus 3 KIL~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~-~v~~~-----~~~~~~aDiiv~s~~l~~~~~~~~~~~v~~~~~ 76 (93)
T COG3414 3 KILAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQC-AVDEI-----KALTDGADIIVTSTKLADEFEDIPKGYVVITGN 76 (93)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHcCCCceeeeE-Eeccc-----ccCCCcccEEEEehHhhhhcCcCCCceEEEEcc
Confidence 5666775555532223 3677899999997333333 22222 222335999998886 5663322356555443
Q ss_pred hh
Q 023191 274 VK 275 (286)
Q Consensus 274 ~~ 275 (286)
+.
T Consensus 77 ~~ 78 (93)
T COG3414 77 GM 78 (93)
T ss_pred cC
Confidence 33
No 423
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=51.47 E-value=21 Score=34.58 Aligned_cols=107 Identities=14% Similarity=0.054 Sum_probs=54.4
Q ss_pred eEEeCCChHHHHHHHHHhcCCCCeEEeccCCCCcccCcccccccc---ccccceeeeEEEecccCCCCCCCCHHHHH---
Q 023191 115 NVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTK---KISAVSIFFETMPYRLNESTGYIDYDQLE--- 188 (286)
Q Consensus 115 ~v~~~sG~~a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~~d~e~l~--- 188 (286)
-|++|.|+..+..-+.+++.+|=.+++ + |.-.+-+. .....| +.... ++ ..++.++-.
T Consensus 37 vvmPTGgGKSlCyQiPAll~~G~TLVV-S--------PLiSLM~DQV~~l~~~G--i~A~~--ln---S~l~~~e~~~v~ 100 (590)
T COG0514 37 VVMPTGGGKSLCYQIPALLLEGLTLVV-S--------PLISLMKDQVDQLEAAG--IRAAY--LN---STLSREERQQVL 100 (590)
T ss_pred EEccCCCCcchHhhhHHHhcCCCEEEE-C--------chHHHHHHHHHHHHHcC--ceeeh--hh---cccCHHHHHHHH
Confidence 355566666444477888889955554 4 44443221 123333 22222 22 234444433
Q ss_pred HHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccC
Q 023191 189 KSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240 (286)
Q Consensus 189 ~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~ 240 (286)
..+.....++++++|-..-...-++.|. +-.-.++++|+||+...+..+
T Consensus 101 ~~l~~g~~klLyisPErl~~~~f~~~L~---~~~i~l~vIDEAHCiSqWGhd 149 (590)
T COG0514 101 NQLKSGQLKLLYISPERLMSPRFLELLK---RLPISLVAIDEAHCISQWGHD 149 (590)
T ss_pred HHHhcCceeEEEECchhhcChHHHHHHH---hCCCceEEechHHHHhhcCCc
Confidence 3333335789998744322211122222 333458999999997666433
No 424
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=51.38 E-value=17 Score=28.44 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=26.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcC
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK 223 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~ 223 (286)
.-|.+.|.+.+.+++|.+|.++..|.....-.+.|.++.+++.
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 4567788889998899999997544333333556667776654
No 425
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=50.76 E-value=43 Score=25.29 Aligned_cols=13 Identities=8% Similarity=0.079 Sum_probs=9.5
Q ss_pred HhcCCCCeEEecc
Q 023191 131 ALLKPHDRIMALD 143 (286)
Q Consensus 131 a~~~~Gd~Vl~~~ 143 (286)
-+..+||.|++..
T Consensus 77 rl~~~GD~VII~s 89 (126)
T TIGR00223 77 RCVSVGDIVIIAS 89 (126)
T ss_pred hcCCCCCEEEEEE
Confidence 3467888888765
No 426
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=49.94 E-value=48 Score=24.70 Aligned_cols=50 Identities=4% Similarity=0.018 Sum_probs=35.6
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc---CCEEEEecc
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADMA 231 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~---~~~vivD~a 231 (286)
..++++.+.+.+.++.+|.++..+......++++.+..++. ++.+++=++
T Consensus 37 vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~ 89 (122)
T cd02071 37 QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGI 89 (122)
T ss_pred CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 56777877777768999999866644555678888877776 556666544
No 427
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=49.81 E-value=43 Score=28.62 Aligned_cols=92 Identities=14% Similarity=0.155 Sum_probs=51.3
Q ss_pred eEEeCCChH-HHHHHHHHhcCCCCeEEecc-CCCCcccCccccccccccccceeeeEEEecccCCCCCCC-CHHHHHHHh
Q 023191 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI-DYDQLEKSA 191 (286)
Q Consensus 115 ~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-d~e~l~~~i 191 (286)
.|++-.|++ +.. +...+...|. |+++- .+|++-.. . -...+ .+ + -.+.+ |.+.+++.+
T Consensus 2 ~ILvlgGTtE~r~-la~~L~~~g~-v~~sv~t~~g~~~~------~--~~~~~-----~~--v--~~G~lg~~~~l~~~l 62 (249)
T PF02571_consen 2 KILVLGGTTEGRK-LAERLAEAGY-VIVSVATSYGGELL------K--PELPG-----LE--V--RVGRLGDEEGLAEFL 62 (249)
T ss_pred EEEEEechHHHHH-HHHHHHhcCC-EEEEEEhhhhHhhh------c--cccCC-----ce--E--EECCCCCHHHHHHHH
Confidence 477888999 777 7788888887 55432 22221110 0 00000 11 1 12456 999999999
Q ss_pred hhcCCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEE
Q 023191 192 TLFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 192 ~~~~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vi 227 (286)
.+++.++| ++.++ +.... -+.+.+.|++.|+..+
T Consensus 63 ~~~~i~~v-IDATHPfA~~i-s~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 63 RENGIDAV-IDATHPFAAEI-SQNAIEACRELGIPYL 97 (249)
T ss_pred HhCCCcEE-EECCCchHHHH-HHHHHHHHhhcCcceE
Confidence 88677665 45444 22111 2345677777776544
No 428
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=49.67 E-value=46 Score=25.14 Aligned_cols=13 Identities=15% Similarity=0.450 Sum_probs=9.5
Q ss_pred hcCCcEEEEcCCC
Q 023191 193 LFRPKLIVAGASA 205 (286)
Q Consensus 193 ~~~tk~v~i~~~n 205 (286)
.++|++|+++..|
T Consensus 100 ~~~P~vv~vd~~N 112 (126)
T PRK05449 100 THKPKVVFVDEDN 112 (126)
T ss_pred cCCCEEEEECCCC
Confidence 3578888887666
No 429
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=48.22 E-value=40 Score=23.36 Aligned_cols=45 Identities=13% Similarity=-0.027 Sum_probs=30.9
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
.++..+.+++.+.++|++. .|.+. .-.+.|..+|++++++++.-.
T Consensus 16 ~~~v~kai~~gkaklViiA-~D~~~-~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVA-EDADP-RLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHcCCeeEEEEE-CCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 4566777776578888884 22222 246788899999999876543
No 430
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=47.71 E-value=1.3e+02 Score=26.58 Aligned_cols=97 Identities=11% Similarity=0.146 Sum_probs=53.6
Q ss_pred EEeCCChH---HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh
Q 023191 116 VQSLSGSP---SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (286)
Q Consensus 116 v~~~sG~~---a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (286)
|...-|++ +.. +..-+.+-|..|+++--....... -....|---.++++..+ .-|.+.|++.++
T Consensus 63 VaTVFGAtGFlGry-vvnklak~GSQviiPyR~d~~~~r--------~lkvmGdLGQvl~~~fd----~~DedSIr~vvk 129 (391)
T KOG2865|consen 63 VATVFGATGFLGRY-VVNKLAKMGSQVIIPYRGDEYDPR--------HLKVMGDLGQVLFMKFD----LRDEDSIRAVVK 129 (391)
T ss_pred EEEEecccccccHH-HHHHHhhcCCeEEEeccCCccchh--------heeecccccceeeeccC----CCCHHHHHHHHH
Confidence 44444666 444 777888999999997422211111 12233433344554443 358899999887
Q ss_pred hcCCcEEEEc---CCCCCCcc-----CHHHHHHHHHhcCCE
Q 023191 193 LFRPKLIVAG---ASAYARLY-----DYERIRKVCNKQKAI 225 (286)
Q Consensus 193 ~~~tk~v~i~---~~n~g~~~-----~l~~I~~ia~~~~~~ 225 (286)
.-|.-+=+|. ++-+.... --++|+.+|++.|+-
T Consensus 130 ~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVe 170 (391)
T KOG2865|consen 130 HSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVE 170 (391)
T ss_pred hCcEEEEeeccccccCCcccccccchHHHHHHHHHHhhChh
Confidence 5332222232 22222222 256999999999874
No 431
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=47.58 E-value=16 Score=25.39 Aligned_cols=20 Identities=25% Similarity=0.326 Sum_probs=18.2
Q ss_pred HHHHHHHHHhcCCEEEEecc
Q 023191 212 YERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (286)
-++|.++|+++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 56899999999999999976
No 432
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=47.23 E-value=77 Score=20.50 Aligned_cols=47 Identities=19% Similarity=0.166 Sum_probs=32.1
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
+...++++-+...+.+.+.+.++-+|+ .....++.+.++++++.++.
T Consensus 13 ~~~~~~~~~~~a~~~g~~~v~iTDh~~--~~~~~~~~~~~~~~gi~~i~ 59 (67)
T smart00481 13 GALSPEELVKRAKELGLKAIAITDHGN--LFGAVEFYKAAKKAGIKPII 59 (67)
T ss_pred ccCCHHHHHHHHHHcCCCEEEEeeCCc--ccCHHHHHHHHHHcCCeEEE
Confidence 456778887777665788898875552 23345667778888877653
No 433
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=46.99 E-value=33 Score=30.66 Aligned_cols=36 Identities=3% Similarity=-0.090 Sum_probs=28.3
Q ss_pred CCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 195 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 195 ~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
....+=+||-|.|...-++++++.|+++++.+=+--
T Consensus 93 g~dkiRINPGNig~~e~v~~vv~~ak~~~ipIRIGV 128 (346)
T TIGR00612 93 GVAKVRINPGNIGFRERVRDVVEKARDHGKAMRIGV 128 (346)
T ss_pred ccCeEEECCCCCCCHHHHHHHHHHHHHCCCCEEEec
Confidence 456677888888887788899999999888765543
No 434
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=46.67 E-value=84 Score=26.87 Aligned_cols=91 Identities=14% Similarity=0.053 Sum_probs=0.0
Q ss_pred eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCC-CHHHHHHHhh
Q 023191 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYI-DYDQLEKSAT 192 (286)
Q Consensus 115 ~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-d~e~l~~~i~ 192 (286)
.|++-.|++ +-. +...+.+.|-.++++- .+. .|. ....+.++. .+.+ |.+.+++.+.
T Consensus 4 ~IlvlgGT~egr~-la~~L~~~g~~v~~Sv--------at~---------~g~-~~~~~~~v~--~G~l~~~~~l~~~l~ 62 (248)
T PRK08057 4 RILLLGGTSEARA-LARALAAAGVDIVLSL--------AGR---------TGG-PADLPGPVR--VGGFGGAEGLAAYLR 62 (248)
T ss_pred eEEEEechHHHHH-HHHHHHhCCCeEEEEE--------ccC---------CCC-cccCCceEE--ECCCCCHHHHHHHHH
Q ss_pred hcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE
Q 023191 193 LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 193 ~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi 227 (286)
+++.++|+ +.++=....=-+.+.+.|++.++..+
T Consensus 63 ~~~i~~VI-DATHPfA~~is~~a~~ac~~~~ipyi 96 (248)
T PRK08057 63 EEGIDLVI-DATHPYAAQISANAAAACRALGIPYL 96 (248)
T ss_pred HCCCCEEE-ECCCccHHHHHHHHHHHHHHhCCcEE
No 435
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=46.66 E-value=68 Score=24.61 Aligned_cols=43 Identities=14% Similarity=0.163 Sum_probs=33.0
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCC
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKA 224 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~ 224 (286)
..++++-+...++++.+|.++.-++.....++++.+.+++.++
T Consensus 39 v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 39 SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 5678888777777999998875555566678899988888754
No 436
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=46.20 E-value=43 Score=29.87 Aligned_cols=106 Identities=14% Similarity=0.024 Sum_probs=60.4
Q ss_pred eEEeCCChH-HHHHHHHHhcCCCCeEEeccCCCCcccCccccccccccccce--eeeEEEecccCCCCCCCCHHHHHHHh
Q 023191 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS--IFFETMPYRLNESTGYIDYDQLEKSA 191 (286)
Q Consensus 115 ~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~~~~~~~~~d~e~l~~~i 191 (286)
.|++|.|+- .-.++...+++.|+.|++.+.-..++.......+ .+.+ ..+.+...+ .-|.+.|++..
T Consensus 4 ~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~----~l~~~~~~v~f~~~D------l~D~~~L~kvF 73 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVR----QLLGEGKSVFFVEGD------LNDAEALEKLF 73 (343)
T ss_pred EEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHH----HhcCCCCceEEEEec------cCCHHHHHHHH
Confidence 588887777 4444777889999999999876666543222111 1222 223333222 44889999988
Q ss_pred hhcCCcEEEE-c------CCC-CCC------ccCHHHHHHHHHhcCCEEEEec
Q 023191 192 TLFRPKLIVA-G------ASA-YAR------LYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 192 ~~~~tk~v~i-~------~~n-~g~------~~~l~~I~~ia~~~~~~vivD~ 230 (286)
+..+...|+. . ++. .+. +.-.=.+.+.+++|+..-++=.
T Consensus 74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~s 126 (343)
T KOG1371|consen 74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFS 126 (343)
T ss_pred hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEe
Confidence 8766555543 1 111 110 0111245678888887555443
No 437
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=45.94 E-value=2.2e+02 Score=25.33 Aligned_cols=55 Identities=15% Similarity=0.169 Sum_probs=37.3
Q ss_pred CCCCCCHHHHHHHhhhc-----CCcEEEEc---CCCCCCccCHHHHHHHHHhcCCEEEEecccc
Q 023191 178 STGYIDYDQLEKSATLF-----RPKLIVAG---ASAYARLYDYERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 178 ~~~~~d~e~l~~~i~~~-----~tk~v~i~---~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (286)
.+..++.+++++.++.. +-.+|+++ |++.+ ...+.++.++|++.++.|+.|....
T Consensus 107 ~Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~-~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 107 PGPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVP-PDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCC-HHHHHHHHHHHHhcCCeEEEECChH
Confidence 34567777776655421 23567775 33333 3348899999999999999999844
No 438
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=45.27 E-value=87 Score=25.61 Aligned_cols=51 Identities=12% Similarity=0.181 Sum_probs=39.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcC----CEEEEecc
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK----AIMLADMA 231 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~----~~vivD~a 231 (286)
.+..+++.+.+.+.++.+|.++.+++.....++++.+.+++.+ +.+++=++
T Consensus 121 ~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~ 175 (197)
T TIGR02370 121 DVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGA 175 (197)
T ss_pred CCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEECh
Confidence 3678899998888899999998777666667888888888873 56777654
No 439
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=45.27 E-value=82 Score=26.23 Aligned_cols=48 Identities=10% Similarity=0.104 Sum_probs=30.3
Q ss_pred CCCHHHHHHHhh----hcCCcEEEEc-CCCC--CC--ccC-------HHHHHHHHHhcCCEEEE
Q 023191 181 YIDYDQLEKSAT----LFRPKLIVAG-ASAY--AR--LYD-------YERIRKVCNKQKAIMLA 228 (286)
Q Consensus 181 ~~d~e~l~~~i~----~~~tk~v~i~-~~n~--g~--~~~-------l~~I~~ia~~~~~~viv 228 (286)
.+++++|++.+. ++++++|+|. -+.. +. ... ++.|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 467787776554 3478999996 2221 11 111 45778889999987665
No 440
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=45.23 E-value=22 Score=34.69 Aligned_cols=32 Identities=9% Similarity=0.189 Sum_probs=27.3
Q ss_pred cCCC-CCCccCHHHHHHHHHhcCCEEEEecccc
Q 023191 202 GASA-YARLYDYERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 202 ~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (286)
.+++ +|+..+++++++-||++||-||+|-++.
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 3444 7888899999999999999999998843
No 441
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=43.79 E-value=47 Score=29.25 Aligned_cols=50 Identities=10% Similarity=-0.075 Sum_probs=40.4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
...+.+++++.+......+|.+.++..|.+.+..+++++|++||+.++.=
T Consensus 236 ~~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~~~~~a~~~gi~~~~~ 285 (316)
T cd03319 236 SCFSAADAARLAGGGAYDGINIKLMKTGGLTEALRIADLARAAGLKVMVG 285 (316)
T ss_pred CCCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCCEEEE
Confidence 35678888888876456777777888888889999999999999987764
No 442
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=43.68 E-value=57 Score=22.65 Aligned_cols=45 Identities=11% Similarity=0.057 Sum_probs=31.2
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+...+.++..+.++|++. .+.+ ..-.+.|.++|++++++++....
T Consensus 14 ~~vlkaIk~gkakLViiA-~Da~-~~~~k~i~~~c~~~~Vpv~~~~t 58 (82)
T PRK13601 14 KQTLKAITNCNVLQVYIA-KDAE-EHVTKKIKELCEEKSIKIVYIDT 58 (82)
T ss_pred HHHHHHHHcCCeeEEEEe-CCCC-HHHHHHHHHHHHhCCCCEEEeCC
Confidence 455666766578898884 2222 23477889999999999865544
No 443
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=43.60 E-value=1.1e+02 Score=23.59 Aligned_cols=54 Identities=20% Similarity=0.223 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccC----HHHHHHHH-HhcCC-EEEEecccc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYD----YERIRKVC-NKQKA-IMLADMAHI 233 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~----l~~I~~ia-~~~~~-~vivD~a~~ 233 (286)
...+++.|.+.+.++++..|+++ |-+ .|...+ +++.++.. ++.++ +.++||..+
T Consensus 39 ~~~~~~~l~~~i~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~T 100 (138)
T PRK00109 39 GTPDWDRLEKLIKEWQPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLS 100 (138)
T ss_pred CchHHHHHHHHHHHhCCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 34578999999998889999998 766 565443 33333332 33355 688999854
No 444
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=43.02 E-value=79 Score=24.50 Aligned_cols=53 Identities=19% Similarity=0.198 Sum_probs=35.8
Q ss_pred CCC-CCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCHH-HHHHHH----HhcCC-EEEEecc
Q 023191 179 TGY-IDYDQLEKSATLFRPKLIVAG-ASA-YARLYDYE-RIRKVC----NKQKA-IMLADMA 231 (286)
Q Consensus 179 ~~~-~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l~-~I~~ia----~~~~~-~vivD~a 231 (286)
++. .|++.|.+++.+.++..|++. |-| .|...+.. .+.+++ ++.++ .+++|+-
T Consensus 36 ~~~~~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 36 NGKPQDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred cccHhhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 344 599999999999899999998 666 55444422 233333 33455 5788986
No 445
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=42.90 E-value=61 Score=27.69 Aligned_cols=50 Identities=8% Similarity=0.003 Sum_probs=41.2
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
...+..++++.+......+|.+.++..|.+.+..+++++|+++|+.++.-
T Consensus 188 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~~~~A~~~gi~~~~~ 237 (265)
T cd03315 188 SAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRVLAVAEALGLPVMVG 237 (265)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHHHHHHHHcCCcEEec
Confidence 35678888888876457788777888899999999999999999987764
No 446
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=42.69 E-value=1e+02 Score=23.47 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=33.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc---CCEEEEe
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLAD 229 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~---~~~vivD 229 (286)
..++++.+...+.++.+|.+|.........++++.+..++. ++.+++=
T Consensus 40 ~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivG 90 (132)
T TIGR00640 40 QTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVG 90 (132)
T ss_pred CCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 46677766666668999999866655555688888888776 4566663
No 447
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=42.62 E-value=84 Score=23.22 Aligned_cols=94 Identities=10% Similarity=0.010 Sum_probs=46.1
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCCcccCcccccccccccc-ceeeeEEEecccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 023191 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA-VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (286)
Q Consensus 124 a~~~~l~a~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~d~e~l~~~i~~~~tk~v~i~ 202 (286)
+.. ++..+.+.|-+|.-.++.+..... ...|..-.+. .......+-++- ..-++.++++... .++.+++.
T Consensus 16 g~~-v~~~l~~~G~~v~~Vnp~~~~i~G--~~~y~sl~e~p~~iDlavv~~~~-----~~~~~~v~~~~~~-g~~~v~~~ 86 (116)
T PF13380_consen 16 GYR-VLRNLKAAGYEVYPVNPKGGEILG--IKCYPSLAEIPEPIDLAVVCVPP-----DKVPEIVDEAAAL-GVKAVWLQ 86 (116)
T ss_dssp HHH-HHHHHHHTT-EEEEESTTCSEETT--EE-BSSGGGCSST-SEEEE-S-H-----HHHHHHHHHHHHH-T-SEEEE-
T ss_pred HHH-HHHHHHhCCCEEEEECCCceEECc--EEeeccccCCCCCCCEEEEEcCH-----HHHHHHHHHHHHc-CCCEEEEE
Confidence 544 777777777667766766654422 2222211110 111111121110 0123445555555 78999887
Q ss_pred CCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 203 ASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 203 ~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+. ..-+++.++|+++|+-++-..+
T Consensus 87 ~g-----~~~~~~~~~a~~~gi~vigp~C 110 (116)
T PF13380_consen 87 PG-----AESEELIEAAREAGIRVIGPNC 110 (116)
T ss_dssp TT-----S--HHHHHHHHHTT-EEEESS-
T ss_pred cc-----hHHHHHHHHHHHcCCEEEeCCc
Confidence 54 5567899999999999886655
No 448
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=42.43 E-value=1.2e+02 Score=23.13 Aligned_cols=18 Identities=11% Similarity=0.110 Sum_probs=15.1
Q ss_pred CHHHHHHHHHhcCCEEEE
Q 023191 211 DYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~viv 228 (286)
-+.++++.||+.|+-|++
T Consensus 45 llge~v~a~h~~Girv~a 62 (132)
T PF14871_consen 45 LLGEQVEACHERGIRVPA 62 (132)
T ss_pred HHHHHHHHHHHCCCEEEE
Confidence 478999999999986664
No 449
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=42.27 E-value=94 Score=23.60 Aligned_cols=54 Identities=17% Similarity=0.214 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc-CCC-CCCccCH----HHHH-HHHHhcCC-EEEEecccc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAG-ASA-YARLYDY----ERIR-KVCNKQKA-IMLADMAHI 233 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~-~~n-~g~~~~l----~~I~-~ia~~~~~-~vivD~a~~ 233 (286)
...+++.|.+.+.++++..|+++ |-| .|...+. ++.+ ++.++.++ +.++||-.+
T Consensus 33 ~~~~~~~l~~~i~~~~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 33 GEPDWSRIEELLKEWTPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred CcHHHHHHHHHHHHcCCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 34568999999998889999998 777 6655442 2222 23344465 588998744
No 450
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=42.00 E-value=30 Score=30.68 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=27.4
Q ss_pred cCCCCCCccCHHHHHHHHHhcCCEEEEeccccc
Q 023191 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHIS 234 (286)
Q Consensus 202 ~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~ 234 (286)
.+=|.+....++++..+|++.+++++.|..|..
T Consensus 191 ~lEnd~k~~sl~evL~lc~e~~iP~v~D~hHh~ 223 (312)
T TIGR00629 191 VLENDDVTWTVEDLLPVCEELNIPFVLDFHHHN 223 (312)
T ss_pred EeccCCCcCCHHHHHHHHHhcCCCEEEEhHHhh
Confidence 345666668999999999999999999987753
No 451
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=41.30 E-value=65 Score=29.93 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=34.5
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi 227 (286)
+++++++.+...-..++.+.++..|.+.+..+++++|+.+|+.++
T Consensus 317 ~~~~~~~~i~~~a~d~v~ik~~~iGGItea~~ia~lA~~~Gi~~v 361 (425)
T TIGR01060 317 NTEILREGIEMGVANSILIKPNQIGTLTETLDAVELAKKAGYTAV 361 (425)
T ss_pred CHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEE
Confidence 577777777653456666667778888889999999999999755
No 452
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=41.23 E-value=70 Score=22.43 Aligned_cols=46 Identities=9% Similarity=0.164 Sum_probs=30.0
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHH-HHHHHHhcCCEEEEecc
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYER-IRKVCNKQKAIMLADMA 231 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~-I~~ia~~~~~~vivD~a 231 (286)
..+..+.+...+.+++++...- ....... |..+|++++++++.=..
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~--~~~~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDC--SPDSIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTS--SSGHHHHHHHHHHHHTTEEEEEESH
T ss_pred hHHHHHHHHcCCCcEEEEcCCC--ChhhhcccchhheeccceeEEEECC
Confidence 4566777776577888885221 2233555 88899999998765443
No 453
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=40.81 E-value=54 Score=29.34 Aligned_cols=95 Identities=17% Similarity=0.181 Sum_probs=55.8
Q ss_pred CCCCHHHHHHHhh---h-cCC--cEEEE-cCCCCC---CccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcc
Q 023191 180 GYIDYDQLEKSAT---L-FRP--KLIVA-GASAYA---RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYA 249 (286)
Q Consensus 180 ~~~d~e~l~~~i~---~-~~t--k~v~i-~~~n~g---~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~ 249 (286)
+.-++++++.++. . .+. +++++ |.+++| ...++..|..+.+++++.|.. -.|..|.... +.. -..|+
T Consensus 141 Gmatl~Ei~~Av~~i~~~G~~~~~i~llhC~s~YP~~~~~~nL~~I~~Lk~~f~~pVG~-SdHt~G~~~~-~aA-valGA 217 (329)
T TIGR03569 141 GMATLEEIEAAVGVLRDAGTPDSNITLLHCTTEYPAPFEDVNLNAMDTLKEAFDLPVGY-SDHTLGIEAP-IAA-VALGA 217 (329)
T ss_pred CCCCHHHHHHHHHHHHHcCCCcCcEEEEEECCCCCCCcccCCHHHHHHHHHHhCCCEEE-CCCCccHHHH-HHH-HHcCC
Confidence 4457787777653 2 123 36665 566666 345788999888889887774 3477663211 100 01147
Q ss_pred eEE--EeCCCCCCCCCCceEEEEecchhhh
Q 023191 250 DVV--TTTTHKSLRGPRGAMIFFRKGVKEI 277 (286)
Q Consensus 250 D~v--~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (286)
+++ -+++.|.+.||-..+-+..+++...
T Consensus 218 ~iIEkH~tldk~~~G~D~~~Sl~p~el~~l 247 (329)
T TIGR03569 218 TVIEKHFTLDKNLPGPDHKASLEPDELKEM 247 (329)
T ss_pred CEEEeCCChhhcCCCCChhhcCCHHHHHHH
Confidence 766 5577788877755544444444433
No 454
>PLN00196 alpha-amylase; Provisional
Probab=40.51 E-value=24 Score=32.83 Aligned_cols=27 Identities=11% Similarity=0.234 Sum_probs=23.4
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.+|+..+++++++.||++|+-||.|.+
T Consensus 87 ~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 87 KYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 355666799999999999999999988
No 455
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=39.92 E-value=2e+02 Score=24.75 Aligned_cols=92 Identities=17% Similarity=0.227 Sum_probs=49.4
Q ss_pred eEEeCCChH-HHHHHHHHhcCCCCeEEecc-CCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh
Q 023191 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (286)
Q Consensus 115 ~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (286)
.|++..|++ +.. +...+.+.|..|+... ..+..-. ..-.|. .++. .+.+|.+.+.+.+.
T Consensus 2 ~ILvlGGT~egr~-la~~L~~~g~~v~~s~~t~~~~~~----------~~~~g~----~~v~----~g~l~~~~l~~~l~ 62 (256)
T TIGR00715 2 TVLLMGGTVDSRA-IAKGLIAQGIEILVTVTTSEGKHL----------YPIHQA----LTVH----TGALDPQELREFLK 62 (256)
T ss_pred eEEEEechHHHHH-HHHHHHhCCCeEEEEEccCCcccc----------ccccCC----ceEE----ECCCCHHHHHHHHH
Confidence 377777877 666 6667777888777654 1111100 001111 1111 24578888999998
Q ss_pred hcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEE
Q 023191 193 LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIM 226 (286)
Q Consensus 193 ~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~v 226 (286)
++++++|+=..|-+-... -+-+.+.|++.++..
T Consensus 63 ~~~i~~VIDAtHPfA~~i-s~~a~~a~~~~~ipy 95 (256)
T TIGR00715 63 RHSIDILVDATHPFAAQI-TTNATAVCKELGIPY 95 (256)
T ss_pred hcCCCEEEEcCCHHHHHH-HHHHHHHHHHhCCcE
Confidence 867886653222222111 224456777776643
No 456
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=39.82 E-value=1.3e+02 Score=26.30 Aligned_cols=47 Identities=15% Similarity=0.227 Sum_probs=33.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEc--CCCCCCc-cC-----------HHHHHHHHHhcCCEEE
Q 023191 181 YIDYDQLEKSATLFRPKLIVAG--ASAYARL-YD-----------YERIRKVCNKQKAIML 227 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~--~~n~g~~-~~-----------l~~I~~ia~~~~~~vi 227 (286)
..|.+.+.+.+++.+|.+|+-+ .++.-.. .+ ...|+++|++.|+++|
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lV 96 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLV 96 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEE
Confidence 3478889999998789988865 4443211 11 3478899999998765
No 457
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=39.62 E-value=81 Score=25.82 Aligned_cols=51 Identities=8% Similarity=0.122 Sum_probs=39.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc----CCEEEEecc
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ----KAIMLADMA 231 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~----~~~vivD~a 231 (286)
.+..+++.+.+.+.++.+|.++.+++.....++++.+..++. ++.+++=+.
T Consensus 119 ~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 119 DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECC
Confidence 467889988888879999999866666666788888888776 456777655
No 458
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=39.11 E-value=1.1e+02 Score=25.37 Aligned_cols=51 Identities=14% Similarity=0.171 Sum_probs=38.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc--CCEEEEecc
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMA 231 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~--~~~vivD~a 231 (286)
.+.++++.+.+.+.++.+|.++...+.....++++.+..++. ++.|++=++
T Consensus 125 ~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vGG~ 177 (213)
T cd02069 125 MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGGA 177 (213)
T ss_pred CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEECh
Confidence 367889999888889999999866666666778887777776 566776554
No 459
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=38.66 E-value=1.4e+02 Score=21.86 Aligned_cols=48 Identities=13% Similarity=0.077 Sum_probs=34.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
.++.++++..+.. +|.+|+++.-..+.. +-.++.+.++++|+-+-+-.
T Consensus 39 ~l~~e~l~~l~~~-~peiliiGTG~~~~~-~~~~~~~~l~~~gi~vE~m~ 86 (109)
T cd05560 39 DLTAAHFEALLAL-QPEVILLGTGERQRF-PPPALLAPLLARGIGVEVMD 86 (109)
T ss_pred cCCHHHHHHHHhc-CCCEEEEecCCCCCc-CCHHHHHHHHHcCCeEEEEC
Confidence 6889999988877 789998873333333 34777788888988655443
No 460
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=38.42 E-value=1.5e+02 Score=21.67 Aligned_cols=48 Identities=13% Similarity=0.073 Sum_probs=34.6
Q ss_pred CCCHHHHHHHhhhcC-CcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFR-PKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~-tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
.++.+++...+.. + +.+|+++.-..+ ..+-.++.+..+++|+-+-+-.
T Consensus 38 ~l~~~~l~~~~~~-~~peiliiGTG~~~-~~~~~~~~~~l~~~gI~vE~m~ 86 (109)
T cd00248 38 DLDPEALLPLLAE-DRPDILLIGTGAEI-AFLPRALRAALRAAGIGVEVMS 86 (109)
T ss_pred cCCHHHHHHHHhh-CCCCEEEEcCCCCC-CcCCHHHHHHHHHcCCeEEEeC
Confidence 6899999988876 5 889998733333 3345678888899998655433
No 461
>PRK06683 hypothetical protein; Provisional
Probab=38.26 E-value=70 Score=22.17 Aligned_cols=45 Identities=7% Similarity=-0.119 Sum_probs=30.3
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+...+.++..+.++|++. .+.+ ..-.+.|.++|++++++++.-..
T Consensus 17 ~~v~kaik~gkaklViiA-~Da~-~~~~~~i~~~~~~~~Vpv~~~~t 61 (82)
T PRK06683 17 KRTLEAIKNGIVKEVVIA-EDAD-MRLTHVIIRTALQHNIPITKVES 61 (82)
T ss_pred HHHHHHHHcCCeeEEEEE-CCCC-HHHHHHHHHHHHhcCCCEEEECC
Confidence 455667766588999984 2211 11367888999999998765543
No 462
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=37.79 E-value=99 Score=28.07 Aligned_cols=97 Identities=11% Similarity=0.106 Sum_probs=56.4
Q ss_pred CCHHHHHHHhhh----cCCcEEEEc--CCCCC----CccCHHHHHHHHHhcCCEEEEecccccc---ccc-cCCCCCCCC
Q 023191 182 IDYDQLEKSATL----FRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISG---LVA-AGVIPSPFE 247 (286)
Q Consensus 182 ~d~e~l~~~i~~----~~tk~v~i~--~~n~g----~~~~l~~I~~ia~~~~~~vivD~a~~~g---~~~-~~~~~~~~~ 247 (286)
.++++++.++.. .+.+++++. .+.++ ...++..|..+-++++++|+.|..|+.| .+. .... .-..
T Consensus 236 ~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~r~~~~~~a~a-Ava~ 314 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGRRDLLLPTAKA-ALAI 314 (360)
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcchhhHHHHHHH-HHHc
Confidence 588888776532 245777763 33333 2357889988888899999999999987 221 0000 0011
Q ss_pred cce--EEEeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 248 YAD--VVTTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 248 ~~D--~v~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
|+| ++=.-+++...||-+..-+..+++....+
T Consensus 315 GAdg~~iE~H~dp~~a~~D~~~sl~p~el~~l~~ 348 (360)
T PRK12595 315 GADGVMAEVHPDPAVALSDSAQQMDIPEFDRFLD 348 (360)
T ss_pred CCCeEEEEecCCCCCCCCchhhhCCHHHHHHHHH
Confidence 476 33333356666665544444455554443
No 463
>PRK00077 eno enolase; Provisional
Probab=37.61 E-value=89 Score=29.04 Aligned_cols=46 Identities=9% Similarity=0.048 Sum_probs=36.0
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
+++++++.+...-..++.+.++..|.+.+..+++++|+.+|+.+++
T Consensus 316 ~~~~~~~~i~~~a~d~v~ik~~~~GGitea~~ia~lA~~~gi~~~v 361 (425)
T PRK00077 316 NTKRLKKGIEKGAANSILIKVNQIGTLTETLDAIELAKRAGYTAVV 361 (425)
T ss_pred CHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 5777877776634567777677788888899999999999996653
No 464
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=37.22 E-value=1e+02 Score=23.90 Aligned_cols=48 Identities=8% Similarity=0.085 Sum_probs=35.7
Q ss_pred HHHHHHhhhcCCcEEEE--cCCC-CCCccCHHHHHHHHHhcCCEEEEeccc
Q 023191 185 DQLEKSATLFRPKLIVA--GASA-YARLYDYERIRKVCNKQKAIMLADMAH 232 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i--~~~n-~g~~~~l~~I~~ia~~~~~~vivD~a~ 232 (286)
.+|-+.|.+.+..+|++ .|-+ -+...+++.+.++|.-||+++-...+-
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nIP~AtN~aT 113 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNIPLATNVAT 113 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCcccccCHHH
Confidence 45666776657777665 3444 456678999999999999999887763
No 465
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=37.20 E-value=68 Score=26.81 Aligned_cols=42 Identities=19% Similarity=0.367 Sum_probs=27.6
Q ss_pred HHHHhhhcCCcEEEEcCCCCC----CccCHHHHHHHHHhcCC-EEEEe
Q 023191 187 LEKSATLFRPKLIVAGASAYA----RLYDYERIRKVCNKQKA-IMLAD 229 (286)
Q Consensus 187 l~~~i~~~~tk~v~i~~~n~g----~~~~l~~I~~ia~~~~~-~vivD 229 (286)
+.+++.. +|+.+++..|=.| .+.+++.|.+..++.|+ .+|.|
T Consensus 150 IARaLa~-~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITD 196 (243)
T COG1137 150 IARALAA-NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITD 196 (243)
T ss_pred HHHHHhc-CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEcc
Confidence 4455555 7888888733322 45677777777777776 56666
No 466
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=37.17 E-value=3e+02 Score=24.44 Aligned_cols=51 Identities=22% Similarity=0.201 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCcceeEEeCCChH-HHHHHHHHhcCCCCeEEecc
Q 023191 89 YIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALD 143 (286)
Q Consensus 89 ~~~~l~~~~~~~~~~~~g~~~~~~~~~v~~~sG~~-a~~~~l~a~~~~Gd~Vl~~~ 143 (286)
+.-+...+++++...++..|. +-+..++|+| |-+++-.+.+.++.+|+-++
T Consensus 163 Gyv~~a~Ei~~Q~~~~~~fD~----vVva~gs~gT~AGl~~g~~~~~~~~~ViG~~ 214 (323)
T COG2515 163 GYVRLALEIAEQAEQLLKFDS----VVVAPGSGGTHAGLLVGLAQLGPDVEVIGID 214 (323)
T ss_pred cHHHHHHHHHHHHhhccCCCE----EEEeCCCcchHHHHHHHhhhccCCCceEEEe
Confidence 344455556677766555554 2233344444 55545566677888887654
No 467
>PRK09590 celB cellobiose phosphotransferase system IIB component; Reviewed
Probab=36.16 E-value=50 Score=24.09 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=34.5
Q ss_pred cEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCC
Q 023191 197 KLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (286)
Q Consensus 197 k~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~ 257 (286)
+++++|.+..++-.=.+.+.++|+++|+-+-++++. .+.+....... .+|+++.+++
T Consensus 3 kILlvCg~G~STSlla~k~k~~~~e~gi~~~i~a~~-~~e~~~~~~~~---~~DvIll~PQ 59 (104)
T PRK09590 3 KALIICAAGMSSSMMAKKTTEYLKEQGKDIEVDAIT-ATEGEKAIAAA---EYDLYLVSPQ 59 (104)
T ss_pred EEEEECCCchHHHHHHHHHHHHHHHCCCceEEEEec-HHHHHHhhccC---CCCEEEEChH
Confidence 456667444343344778899999999988877662 22221111111 3788888875
No 468
>PLN00191 enolase
Probab=36.15 E-value=96 Score=29.18 Aligned_cols=49 Identities=4% Similarity=-0.037 Sum_probs=38.0
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
..+++++++.+...-..+|.+-.+..|.+.+..+++++|+++|+.+++-
T Consensus 346 vtn~~~l~~~I~~~aad~i~iKl~qiGGITea~~~a~lA~~~G~~~~is 394 (457)
T PLN00191 346 VTNPKRVAKAIQEKACNALLLKVNQIGTVTESIEAVKMSKAAGWGVMTS 394 (457)
T ss_pred cCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHCCCEEEeC
Confidence 3567777777776345666666677888888999999999999988764
No 469
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=35.83 E-value=2.7e+02 Score=24.08 Aligned_cols=50 Identities=18% Similarity=0.351 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEc-CCC--CC---Ccc----CHHHHHHHHHhcCCEEEEe
Q 023191 179 TGYIDYDQLEKSATLFRPKLIVAG-ASA--YA---RLY----DYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 179 ~~~~d~e~l~~~i~~~~tk~v~i~-~~n--~g---~~~----~l~~I~~ia~~~~~~vivD 229 (286)
.+.+.-+.++-.+.. +|.+++++ |+. .| ... .++-|.+++.+.+.-+|+|
T Consensus 186 qGp~~~~~l~~i~e~-~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~~lViD 245 (304)
T COG2248 186 QGPINDEALEFILEK-RPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNATLVID 245 (304)
T ss_pred cCCCccHHHHHHHhc-CCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCcceEEEe
Confidence 355666777777777 89999997 665 12 111 2556778888888889998
No 470
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=35.77 E-value=2.2e+02 Score=24.43 Aligned_cols=91 Identities=18% Similarity=0.243 Sum_probs=51.6
Q ss_pred eEEeCCChH-HHHHHHHHhc-CCCCeEEeccCCCCcccCccccccccccccceeeeEEEecccCCCCCCCCHHHHHHHhh
Q 023191 115 NVQSLSGSP-SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (286)
Q Consensus 115 ~v~~~sG~~-a~~~~l~a~~-~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~e~l~~~i~ 192 (286)
.|++..|++ +.. +..-+. .+++.+++.-..|++-+. . ..+ + .. ..+..+.+.|.+.++
T Consensus 4 ~ilvlGGT~Dar~-la~~L~~~~~~~~~ss~t~~g~~l~--~--------~~~------~--~~-~~G~l~~e~l~~~l~ 63 (257)
T COG2099 4 RILLLGGTSDARA-LAKKLAAAPVDIILSSLTGYGAKLA--E--------QIG------P--VR-VGGFLGAEGLAAFLR 63 (257)
T ss_pred eEEEEeccHHHHH-HHHHhhccCccEEEEEcccccccch--h--------ccC------C--ee-ecCcCCHHHHHHHHH
Confidence 477878888 766 666663 456777777655544421 1 011 1 00 246778999999998
Q ss_pred hcCCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEE
Q 023191 193 LFRPKLIVAGASA-YARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 193 ~~~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~vi 227 (286)
+++.++++ +.++ +-... =+-.+++|++.|++.+
T Consensus 64 e~~i~llI-DATHPyAa~i-S~Na~~aake~gipy~ 97 (257)
T COG2099 64 EEGIDLLI-DATHPYAARI-SQNAARAAKETGIPYL 97 (257)
T ss_pred HcCCCEEE-ECCChHHHHH-HHHHHHHHHHhCCcEE
Confidence 87776554 5333 32211 1233456666665443
No 471
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=35.43 E-value=79 Score=26.32 Aligned_cols=39 Identities=21% Similarity=0.109 Sum_probs=22.0
Q ss_pred CCCHHHHHHHhh----hcCCcEEEEc-CCCCCCccCHHHHHHHH
Q 023191 181 YIDYDQLEKSAT----LFRPKLIVAG-ASAYARLYDYERIRKVC 219 (286)
Q Consensus 181 ~~d~e~l~~~i~----~~~tk~v~i~-~~n~g~~~~l~~I~~ia 219 (286)
...++++.+.++ +.+.++|++. .+.-|.....++|.+..
T Consensus 28 ~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg~~~~~~el~~~i 71 (222)
T cd07018 28 ELSLRDLLEALEKAAEDDRIKGIVLDLDGLSGGLAKLEELRQAL 71 (222)
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEEECCCCCCCHHHHHHHHHHH
Confidence 445666666553 2357889886 33333555566665444
No 472
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=35.34 E-value=1.1e+02 Score=26.17 Aligned_cols=56 Identities=14% Similarity=0.289 Sum_probs=38.7
Q ss_pred CCCHHHHHHHhhh----cCCcEEEEc--CCCCC---C-ccCHHHHHHHHHhcCCEEEEeccccccc
Q 023191 181 YIDYDQLEKSATL----FRPKLIVAG--ASAYA---R-LYDYERIRKVCNKQKAIMLADMAHISGL 236 (286)
Q Consensus 181 ~~d~e~l~~~i~~----~~tk~v~i~--~~n~g---~-~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (286)
..++++++.++.. .+.+++++. .+.++ . ..++..|..+.++.+++|++|-+|+.|.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 5677777665532 245677663 22233 2 5678888877777899999999998775
No 473
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=35.17 E-value=87 Score=22.52 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=29.6
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
.+..+.+++.+.++|++. .+.+. .-.+.+..+|++++++++.-
T Consensus 22 ~~v~kai~~gkaklViiA-~D~~~-~~~~~i~~~c~~~~Ip~~~~ 64 (99)
T PRK01018 22 KRTIKAIKLGKAKLVIVA-SNCPK-DIKEDIEYYAKLSGIPVYEY 64 (99)
T ss_pred HHHHHHHHcCCceEEEEe-CCCCH-HHHHHHHHHHHHcCCCEEEE
Confidence 456667776578888885 22322 33678889999999987553
No 474
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=35.15 E-value=1.1e+02 Score=24.12 Aligned_cols=47 Identities=21% Similarity=0.237 Sum_probs=34.3
Q ss_pred CCCCCCHHHHHHHhhhcCCc-EEEEc-CCC-CCC--ccCHHHHHHHHHh-cCC
Q 023191 178 STGYIDYDQLEKSATLFRPK-LIVAG-ASA-YAR--LYDYERIRKVCNK-QKA 224 (286)
Q Consensus 178 ~~~~~d~e~l~~~i~~~~tk-~v~i~-~~n-~g~--~~~l~~I~~ia~~-~~~ 224 (286)
-++.+.++.|+++-.+++-+ .+++. |.| ++. .-+-++|.++|.. ||+
T Consensus 37 CGfTpQYegLe~Ly~ky~~~Gf~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgV 89 (162)
T COG0386 37 CGFTPQYEGLEALYKKYKDKGFEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGV 89 (162)
T ss_pred cCCcHhHHHHHHHHHHHhhCCcEEEeccccccccCCCCCHHHHHHHHHhccCc
Confidence 45788899999988776554 55667 888 553 3468899999975 454
No 475
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism]
Probab=35.10 E-value=67 Score=28.71 Aligned_cols=51 Identities=6% Similarity=-0.037 Sum_probs=33.9
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 180 ~~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
..+|+.-+.+.+.- ....+=|||-|.|...-++++++.|+++|+++=+---
T Consensus 81 iHf~~rla~~~~~~-g~~k~RINPGNig~~~~v~~vVe~Ak~~g~piRIGVN 131 (361)
T COG0821 81 IHFDYRLALEAAEC-GVDKVRINPGNIGFKDRVREVVEAAKDKGIPIRIGVN 131 (361)
T ss_pred eeccHHHHHHhhhc-CcceEEECCcccCcHHHHHHHHHHHHHcCCCEEEecc
Confidence 34454433333332 3566778888888777888999999999887765433
No 476
>PLN02361 alpha-amylase
Probab=34.96 E-value=34 Score=31.56 Aligned_cols=27 Identities=15% Similarity=0.176 Sum_probs=23.6
Q ss_pred CCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 205 n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.+|+..+++++++.||++|+.||.|.+
T Consensus 71 ~~Gt~~el~~li~~~h~~gi~vi~D~V 97 (401)
T PLN02361 71 AYGSEHLLKSLLRKMKQYNVRAMADIV 97 (401)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEEEc
Confidence 355667799999999999999999998
No 477
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=34.94 E-value=1.5e+02 Score=25.55 Aligned_cols=54 Identities=11% Similarity=0.173 Sum_probs=38.2
Q ss_pred CCHHHHHHHhhh----cCCcEEEE-c-CCCC-C---CccCHHHHHHHHHhcCCEEEEecccccc
Q 023191 182 IDYDQLEKSATL----FRPKLIVA-G-ASAY-A---RLYDYERIRKVCNKQKAIMLADMAHISG 235 (286)
Q Consensus 182 ~d~e~l~~~i~~----~~tk~v~i-~-~~n~-g---~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (286)
.++++++.++.. .+..++++ + .+.+ + ...++..|..+.++++++|+.|..|+.|
T Consensus 143 ~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 143 NTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 378887776542 23456665 2 3344 4 3567889988888889999999999877
No 478
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=34.69 E-value=40 Score=28.84 Aligned_cols=23 Identities=17% Similarity=0.167 Sum_probs=21.5
Q ss_pred CHHHHHHHHHhcCCEEEEecccc
Q 023191 211 DYERIRKVCNKQKAIMLADMAHI 233 (286)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~ 233 (286)
+.+++.++++++++-+|+|++|=
T Consensus 54 ~~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 54 DEEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred CHHHHHHHHHhCCCcEEEECCCc
Confidence 78899999999999999999975
No 479
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=34.42 E-value=74 Score=27.35 Aligned_cols=45 Identities=13% Similarity=0.154 Sum_probs=31.6
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEecc
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
.+++++.+. +..+++++++ .+...++.++.+.+++++..+++|..
T Consensus 83 ~~~~~~~~~--~~davvig~G-l~~~~~~~~l~~~~~~~~~pvVlDa~ 127 (272)
T TIGR00196 83 VDEDEELLE--RYDVVVIGPG-LGQDPSFKKAVEEVLELDKPVVLDAD 127 (272)
T ss_pred HHHHHhhhc--cCCEEEEcCC-CCCCHHHHHHHHHHHhcCCCEEEEhH
Confidence 455555543 4678888644 34333488899999999999999975
No 480
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=34.33 E-value=77 Score=26.13 Aligned_cols=34 Identities=3% Similarity=0.148 Sum_probs=26.4
Q ss_pred CCcEEEEcCCC-CCCccCHHHHHHHHHhcCCEEEE
Q 023191 195 RPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 195 ~tk~v~i~~~n-~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.|..|+..--| -|.....+++.++|++||+.++.
T Consensus 156 ~Pa~VicEi~~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 156 KPAGVICEIMNDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCcEEEEEEeCCCccccChHHHHHHHHHcCCcEEE
Confidence 67666544334 77888899999999999998774
No 481
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=34.21 E-value=1.2e+02 Score=28.85 Aligned_cols=95 Identities=17% Similarity=0.163 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHhhh----cCCcEEEEc---CCCCCCccCHHHHHHHHHhcC-CEEEEeccccccccccCCCCCCCC----
Q 023191 180 GYIDYDQLEKSATL----FRPKLIVAG---ASAYARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSPFE---- 247 (286)
Q Consensus 180 ~~~d~e~l~~~i~~----~~tk~v~i~---~~n~g~~~~l~~I~~ia~~~~-~~vivD~a~~~g~~~~~~~~~~~~---- 247 (286)
+++|...+++.|++ .++-+|++. .+-.|....+-+|.++|++|+ .|++.-+ |+..........+.+.
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~e 350 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEE 350 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHH
Confidence 58999999998865 245566664 333667778999999999997 7887654 2333332221111121
Q ss_pred cceEEEeCCCCCCCCCCceEEEEecchh
Q 023191 248 YADVVTTTTHKSLRGPRGAMIFFRKGVK 275 (286)
Q Consensus 248 ~~D~v~~s~~K~l~gp~gG~l~~~~~~~ 275 (286)
..|.+.....-|++-|..-++.....+.
T Consensus 351 qldSMal~ialWLGiPSaPiV~LHRPle 378 (838)
T KOG0630|consen 351 QLDSMALNIALWLGIPSAPIVLLHRPLE 378 (838)
T ss_pred HHhhccchhHHHhCCCCCceEEeecccc
Confidence 2566666677788777665555544443
No 482
>PTZ00106 60S ribosomal protein L30; Provisional
Probab=34.19 E-value=78 Score=23.26 Aligned_cols=43 Identities=12% Similarity=-0.027 Sum_probs=29.1
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
+...+++...+.++|++. .+.+ ..-.++|...|+.++++++..
T Consensus 31 ~~vlkalk~gkaklViiA-~D~~-~~~kkki~~~~~~~~Vpv~~~ 73 (108)
T PTZ00106 31 KSTLKALRNGKAKLVIIS-NNCP-PIRRSEIEYYAMLSKTGVHHY 73 (108)
T ss_pred HHHHHHHHcCCeeEEEEe-CCCC-HHHHHHHHHHHhhcCCCEEEe
Confidence 455666665578888884 2222 223678888999999998764
No 483
>PTZ00081 enolase; Provisional
Probab=33.75 E-value=1.1e+02 Score=28.66 Aligned_cols=49 Identities=6% Similarity=0.017 Sum_probs=36.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
.-+++++++.+...-..++.+.++..|.+.+..+++++|+++++.+++=
T Consensus 334 ~tn~~~l~~~I~~~aad~i~iKvnqiGGITe~l~~a~lA~~~Gi~~iis 382 (439)
T PTZ00081 334 VTNPTRIKKAIEKKACNALLLKVNQIGTVTEAIEAAKLAQKNGWGVMVS 382 (439)
T ss_pred cCCHHHHHHHHHhCCCCEEEeccccccCHHHHHHHHHHHHHcCCcEEEe
Confidence 3457777777766344666666666788888999999999999887763
No 484
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=33.42 E-value=1e+02 Score=22.43 Aligned_cols=44 Identities=16% Similarity=0.282 Sum_probs=29.6
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
.+.+++.++..+.++|++. ++ ....-.++|...|+.++++++.-
T Consensus 22 ~~~v~~aik~gk~~lVI~A-~D-~s~~~kkki~~~~~~~~vp~~~~ 65 (104)
T PRK05583 22 YNKCEEAIKKKKVYLIIIS-ND-ISENSKNKFKNYCNKYNIPYIEG 65 (104)
T ss_pred HHHHHHHHHcCCceEEEEe-CC-CCHhHHHHHHHHHHHcCCCEEEe
Confidence 3567777776578888774 22 12234678888999999887654
No 485
>PRK15452 putative protease; Provisional
Probab=33.37 E-value=96 Score=29.03 Aligned_cols=9 Identities=11% Similarity=0.183 Sum_probs=3.9
Q ss_pred CHHHHHHHh
Q 023191 183 DYDQLEKSA 191 (286)
Q Consensus 183 d~e~l~~~i 191 (286)
+.+++++.+
T Consensus 44 ~~edl~eav 52 (443)
T PRK15452 44 NHENLALGI 52 (443)
T ss_pred CHHHHHHHH
Confidence 344444443
No 486
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=33.18 E-value=1.8e+02 Score=23.27 Aligned_cols=43 Identities=2% Similarity=-0.022 Sum_probs=29.7
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEe
Q 023191 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (286)
Q Consensus 185 e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD 229 (286)
.++...+.. ++.+|++....+.. .++.++.+++.++|+.|++=
T Consensus 67 ~~~~~~~~~-~~dvI~IDEaQFf~-~~i~~l~~~~~~~g~~Vi~~ 109 (176)
T PF00265_consen 67 FEIIDILEN-DYDVIGIDEAQFFD-EQIVQLVEILANKGIPVICA 109 (176)
T ss_dssp GGGGGGCCT-TCSEEEESSGGGST-TTHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHHhcc-CCCEEEEechHhhH-HHHHHHHHHHHhCCCeEEEE
Confidence 334444444 47889888666555 67888889988999988863
No 487
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=33.08 E-value=1.1e+02 Score=28.26 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=36.0
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
.+++++++.+...-..++.+.+...|.+.+..+++++|+++|+.+++
T Consensus 315 ~~~~~~~~~i~~~a~d~v~ik~~~iGGite~~~ia~lA~~~G~~~~~ 361 (408)
T cd03313 315 TNPERLKKGIEKKAANALLIKVNQIGTLTETIEAIKLAKKNGYGVVV 361 (408)
T ss_pred CCHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEc
Confidence 36777777776634566666677788888899999999999998763
No 488
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=32.96 E-value=1.4e+02 Score=22.20 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=23.4
Q ss_pred hcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEE
Q 023191 193 LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (286)
Q Consensus 193 ~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~viv 228 (286)
+.+..++.+....+....| +++.+.|++++++++.
T Consensus 70 ~~~~agL~i~~~~~~~~iP-~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 70 EKGAAGLGIKTGRYLDEIP-EEIIELADELGLPLIE 104 (123)
T ss_pred HCCCeEEEEeccCccccCC-HHHHHHHHHcCCCEEE
Confidence 3377888875322222333 7899999999998764
No 489
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=32.63 E-value=1.5e+02 Score=24.45 Aligned_cols=88 Identities=10% Similarity=0.039 Sum_probs=42.3
Q ss_pred CHHHHHHHhh----hcCCcEEEEc-CCCCCCccCHHHHHHHHHhc----CCEEEEec-cccccccccCCCCCCCCcceEE
Q 023191 183 DYDQLEKSAT----LFRPKLIVAG-ASAYARLYDYERIRKVCNKQ----KAIMLADM-AHISGLVAAGVIPSPFEYADVV 252 (286)
Q Consensus 183 d~e~l~~~i~----~~~tk~v~i~-~~n~g~~~~l~~I~~ia~~~----~~~vivD~-a~~~g~~~~~~~~~~~~~~D~v 252 (286)
.++++.+.++ +.+.++|++. .+--+.....++|.+..++. .++..+++ +.+.|... .. .+|.+
T Consensus 26 ~~~~l~~~l~~a~~d~~i~~Vvl~~~s~gg~~~~~~~l~~~l~~~~~~KpViA~v~g~a~s~gy~l----A~---~aD~i 98 (214)
T cd07022 26 SYEGIAAAIRAALADPDVRAIVLDIDSPGGEVAGVFELADAIRAARAGKPIVAFVNGLAASAAYWI----AS---AADRI 98 (214)
T ss_pred cHHHHHHHHHHHhhCCCCcEEEEEEeCCCCcHHHHHHHHHHHHHHhcCCCEEEEECCchhhHHHHH----Hh---cCCEE
Confidence 3455555443 3367888885 22222333444454444332 35666664 32333221 11 27777
Q ss_pred EeCCCCCCCCCCceEEEEecchhhhhc
Q 023191 253 TTTTHKSLRGPRGAMIFFRKGVKEINK 279 (286)
Q Consensus 253 ~~s~~K~l~gp~gG~l~~~~~~~~~~~ 279 (286)
+.+.+=.++. -|+++....+...++
T Consensus 99 ~a~~~a~~g~--iG~~~~~~~~~~ll~ 123 (214)
T cd07022 99 VVTPTAGVGS--IGVVASHVDQSKALE 123 (214)
T ss_pred EEcCCCeEEe--eeEEEecCCHHHHHH
Confidence 6665543421 166666665555443
No 490
>PRK09505 malS alpha-amylase; Reviewed
Probab=32.58 E-value=38 Score=33.55 Aligned_cols=24 Identities=13% Similarity=0.142 Sum_probs=21.1
Q ss_pred CccCHHHHHHHHHhcCCEEEEecc
Q 023191 208 RLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
+..+++++++.||++|+.||.|.+
T Consensus 290 t~~dfk~Lv~~aH~~Gi~VilD~V 313 (683)
T PRK09505 290 TEADLRTLVDEAHQRGIRILFDVV 313 (683)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 444688999999999999999988
No 491
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=32.46 E-value=1.1e+02 Score=25.33 Aligned_cols=50 Identities=8% Similarity=0.022 Sum_probs=37.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+.+++.+.+...-..++.+.++..|...+..+++++|+++|+.++.=+
T Consensus 154 ~~~~~~~~~~~~~~~~d~~~~k~~~~GGi~~~~~i~~~a~~~gi~~~~~~ 203 (229)
T cd00308 154 VTTVDDALEALELGAVDILQIKPTRVGGLTESRRAADLAEAFGIRVMVHG 203 (229)
T ss_pred CCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 34677777776653456666667778888889999999999999877643
No 492
>PF04001 Vhr1: Transcription factor Vhr1; InterPro: IPR007147 This is a family of proteins of unknown function found in yeast.
Probab=31.86 E-value=1.5e+02 Score=20.77 Aligned_cols=74 Identities=14% Similarity=0.232 Sum_probs=41.1
Q ss_pred CchhhccccccccChHHHHHHHHHHHHHHcCceecCCCCCCC--HHHHHHhccccccCCCCCCCCCcccCCcchHHHHHH
Q 023191 18 TWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTS--VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAES 95 (286)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~e~~~~--~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 95 (286)
+-...+...+...+...+..+......-.+.++|+ +-..+ +.-+..+.+.|...+ +||. .+..++++
T Consensus 7 g~Th~IR~~LnF~De~~WK~FSsRRLELId~~~Ls--~~KASEQd~~I~~iA~iLR~Ef--~Yp~-------~~~~~FeK 75 (95)
T PF04001_consen 7 GTTHKIREQLNFHDERKWKRFSSRRLELIDKFDLS--SRKASEQDDNIRQIAEILRTEF--GYPE-------SYSSEFEK 75 (95)
T ss_pred chhHHHHHHhCCccHHHHHHHHHHHHHHHHHcCcc--cchhhhhHHHHHHHHHHHHHHh--CCCh-------hhHHHHHH
Confidence 34556677777888888888776544445666664 22222 233444555565444 5544 24455665
Q ss_pred HHHHHHH
Q 023191 96 LCQKRAL 102 (286)
Q Consensus 96 ~~~~~~~ 102 (286)
.++..++
T Consensus 76 LV~aavQ 82 (95)
T PF04001_consen 76 LVTAAVQ 82 (95)
T ss_pred HHHHHHH
Confidence 5555443
No 493
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=31.66 E-value=1.5e+02 Score=21.57 Aligned_cols=53 Identities=8% Similarity=0.057 Sum_probs=35.6
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhc--CCEEEEeccccc
Q 023191 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ--KAIMLADMAHIS 234 (286)
Q Consensus 182 ~d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~--~~~vivD~a~~~ 234 (286)
...+++.+.+.+.++++|.++.........++.+.++.+++ ++.+++=+.+..
T Consensus 37 ~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t 91 (125)
T cd02065 37 VPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHPT 91 (125)
T ss_pred CCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcCC
Confidence 35566666666668999999744433334566677777777 588888777543
No 494
>PF13727 CoA_binding_3: CoA-binding domain; PDB: 3NKL_B.
Probab=31.43 E-value=59 Score=25.22 Aligned_cols=44 Identities=11% Similarity=0.030 Sum_probs=28.4
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEE
Q 023191 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (286)
Q Consensus 183 d~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vi 227 (286)
+.+++.+.+++++..-|+++.+.. ....++++.+.|+++++-+.
T Consensus 129 ~~~~l~~~~~~~~id~v~ial~~~-~~~~i~~ii~~~~~~~v~v~ 172 (175)
T PF13727_consen 129 DLDDLPELVREHDIDEVIIALPWS-EEEQIKRIIEELENHGVRVR 172 (175)
T ss_dssp -GGGHHHHHHHHT--EEEE--TTS--HHHHHHHHHHHHTTT-EEE
T ss_pred CHHHHHHHHHhCCCCEEEEEcCcc-CHHHHHHHHHHHHhCCCEEE
Confidence 567788888887888898873332 23468899999999988654
No 495
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=31.20 E-value=1.1e+02 Score=28.37 Aligned_cols=48 Identities=8% Similarity=0.243 Sum_probs=33.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEc-CCC-C--------CCccC----HHHHHHHHHhcCCEEEE
Q 023191 181 YIDYDQLEKSATLFRPKLIVAG-ASA-Y--------ARLYD----YERIRKVCNKQKAIMLA 228 (286)
Q Consensus 181 ~~d~e~l~~~i~~~~tk~v~i~-~~n-~--------g~~~~----l~~I~~ia~~~~~~viv 228 (286)
..|++++.+.+.+.+|++++++ -.. + |++.. -.++.++|++.|+.++.
T Consensus 154 Et~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 154 ETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred hcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4589999999988899999984 111 1 22222 34778999999987553
No 496
>PRK10785 maltodextrin glucosidase; Provisional
Probab=31.18 E-value=40 Score=32.89 Aligned_cols=49 Identities=12% Similarity=0.109 Sum_probs=34.5
Q ss_pred CHHHHHHHhh---hcCCcEEEEcC-----CCC--------------CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 183 DYDQLEKSAT---LFRPKLIVAGA-----SAY--------------ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 183 d~e~l~~~i~---~~~tk~v~i~~-----~n~--------------g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
|+.-|.+.+. +-...+|+++| ++. |+..+++++++.||++|+-||.|.+
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 6666666553 33567788752 221 2334688999999999999999998
No 497
>TIGR03677 rpl7ae 50S ribosomal protein L7Ae. Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs. Interacts with protein L15e.
Probab=30.87 E-value=1.1e+02 Score=22.67 Aligned_cols=46 Identities=11% Similarity=0.071 Sum_probs=29.9
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEec
Q 023191 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (286)
Q Consensus 184 ~e~l~~~i~~~~tk~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~ 230 (286)
..+..+.++..+.++|++. .+.....-.+.+..+|++++++++.-.
T Consensus 31 ~~~v~kaikkgka~LVilA-~D~s~~~~~~~i~~lc~~~~Ip~~~~~ 76 (117)
T TIGR03677 31 TNEVTKAVERGIAKLVVIA-EDVEPPEIVAHLPALCEEKGIPYVYVK 76 (117)
T ss_pred HHHHHHHHHcCCccEEEEe-CCCCcHHHHHHHHHHHHHcCCCEEEeC
Confidence 4566777776578888884 222111125788899999999765543
No 498
>cd05564 PTS_IIB_chitobiose_lichenan PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB d
Probab=30.70 E-value=87 Score=22.26 Aligned_cols=55 Identities=13% Similarity=0.122 Sum_probs=34.2
Q ss_pred cEEEEcCCCCCCccCHHHHHHHHHhcCCEEEEeccccccccccCCCCCCCCcceEEEeCCC
Q 023191 197 KLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (286)
Q Consensus 197 k~v~i~~~n~g~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~v~~s~~ 257 (286)
|++++|.+..++-.=++++.+.++++|+.+-++.+.. +.+.. .....|+++.+++
T Consensus 1 kIl~~Cg~G~sTS~~~~ki~~~~~~~~~~~~v~~~~~-~~~~~-----~~~~~Diil~~Pq 55 (96)
T cd05564 1 KILLVCSAGMSTSILVKKMKKAAEKRGIDAEIEAVPE-SELEE-----YIDDADVVLLGPQ 55 (96)
T ss_pred CEEEEcCCCchHHHHHHHHHHHHHHCCCceEEEEecH-HHHHH-----hcCCCCEEEEChh
Confidence 3566664443322237899999999999887777632 22211 1123788888876
No 499
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=30.62 E-value=1.3e+02 Score=21.93 Aligned_cols=46 Identities=7% Similarity=-0.041 Sum_probs=31.3
Q ss_pred HHHHHhhh-cCCcEEEEcCCC-C--CCccCHHHHHHHHHhcCCEEEEecc
Q 023191 186 QLEKSATL-FRPKLIVAGASA-Y--ARLYDYERIRKVCNKQKAIMLADMA 231 (286)
Q Consensus 186 ~l~~~i~~-~~tk~v~i~~~n-~--g~~~~l~~I~~ia~~~~~~vivD~a 231 (286)
++.+.+.+ .+..+|+..++. . ....+-..|.+.|.+++++++.+..
T Consensus 58 ~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 58 TVDAAIAEKGKFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred HHHHHHhCCCCEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEECHH
Confidence 34555655 577777654432 2 1344577999999999999998754
No 500
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=30.58 E-value=2e+02 Score=25.30 Aligned_cols=54 Identities=9% Similarity=0.256 Sum_probs=34.2
Q ss_pred ccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC--CC--CccCHHHHHHHHHhc---CCEEEE
Q 023191 174 RLNESTGYIDYDQLEKSATL---FRPKLIVAGASA--YA--RLYDYERIRKVCNKQ---KAIMLA 228 (286)
Q Consensus 174 ~~~~~~~~~d~e~l~~~i~~---~~tk~v~i~~~n--~g--~~~~l~~I~~ia~~~---~~~viv 228 (286)
+++ +++.+|.+.+++.++. ...+.|+++.++ .. +..+-.++.+.+.+. ++.||+
T Consensus 18 Pf~-~dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 18 PFD-ADGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 455 5689999999998753 367888886433 22 344455666655443 466665
Done!